##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM1227446v1 #!genome-build-accession NCBI_Assembly:GCF_012274465.1 #!annotation-date 12/19/2025 10:41:56 #!annotation-source NCBI RefSeq GCF_012274465.1-RS_2025_12_19 ##sequence-region NZ_JAATTN010000100.1 1 5828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000100.1 RefSeq region 1 5828 . + . ID=NZ_JAATTN010000100.1:1..5828;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000100.1 RefSeq gene 1 486 . + . ID=gene-HGK48_RS05585;Name=HGK48_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05585;partial=true;start_range=.,1 NZ_JAATTN010000100.1 GeneMarkS-2+ CDS 1 486 . + 0 ID=cds-WP_168236741.1;Parent=gene-HGK48_RS05585;Dbxref=GenBank:WP_168236741.1;Name=WP_168236741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05585;partial=true;product=hypothetical protein;protein_id=WP_168236741.1;start_range=.,1;transl_table=11 NZ_JAATTN010000100.1 RefSeq gene 483 1178 . + . ID=gene-HGK48_RS05590;Name=HGK48_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05590 NZ_JAATTN010000100.1 Protein Homology CDS 483 1178 . + 0 ID=cds-WP_010403934.1;Parent=gene-HGK48_RS05590;Dbxref=GenBank:WP_010403934.1;Name=WP_010403934.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731888.1;locus_tag=HGK48_RS05590;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_010403934.1;transl_table=11 NZ_JAATTN010000100.1 RefSeq gene 1172 1543 . + . ID=gene-HGK48_RS05595;Name=HGK48_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05595 NZ_JAATTN010000100.1 Protein Homology CDS 1172 1543 . + 0 ID=cds-WP_002849046.1;Parent=gene-HGK48_RS05595;Dbxref=GenBank:WP_002849046.1;Name=WP_002849046.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849046.1;locus_tag=HGK48_RS05595;product=YkgJ family cysteine cluster protein;protein_id=WP_002849046.1;transl_table=11 NZ_JAATTN010000100.1 RefSeq gene 1519 2814 . + . ID=gene-HGK48_RS05600;Name=HGK48_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05600 NZ_JAATTN010000100.1 GeneMarkS-2+ CDS 1519 2814 . + 0 ID=cds-WP_024305373.1;Parent=gene-HGK48_RS05600;Dbxref=GenBank:WP_024305373.1;Name=WP_024305373.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05600;product=tetratricopeptide repeat protein;protein_id=WP_024305373.1;transl_table=11 NZ_JAATTN010000100.1 RefSeq gene 2811 3587 . + . ID=gene-HGK48_RS05605;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=HGK48_RS05605 NZ_JAATTN010000100.1 Protein Homology CDS 2811 3587 . + 0 ID=cds-WP_002849050.1;Parent=gene-HGK48_RS05605;Dbxref=GenBank:WP_002849050.1;Name=WP_002849050.1;gbkey=CDS;gene=trpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849050.1;locus_tag=HGK48_RS05605;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_002849050.1;transl_table=11 NZ_JAATTN010000100.1 RefSeq gene 3587 4093 . + . ID=gene-HGK48_RS05610;Name=HGK48_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05610 NZ_JAATTN010000100.1 Protein Homology CDS 3587 4093 . + 0 ID=cds-WP_002849052.1;Parent=gene-HGK48_RS05610;Dbxref=GenBank:WP_002849052.1;Name=WP_002849052.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849052.1;locus_tag=HGK48_RS05610;product=HIT family protein;protein_id=WP_002849052.1;transl_table=11 NZ_JAATTN010000100.1 RefSeq gene 4090 4827 . + . ID=gene-HGK48_RS05615;Name=HGK48_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05615 NZ_JAATTN010000100.1 Protein Homology CDS 4090 4827 . + 0 ID=cds-WP_011731891.1;Parent=gene-HGK48_RS05615;Dbxref=GenBank:WP_011731891.1;Name=WP_011731891.1;Ontology_term=GO:0033194;gbkey=CDS;go_process=response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731891.1;locus_tag=HGK48_RS05615;product=YaaA family protein;protein_id=WP_011731891.1;transl_table=11 NZ_JAATTN010000100.1 RefSeq gene 4936 5022 . + . ID=gene-HGK48_RS05620;Name=HGK48_RS05620;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS05620 NZ_JAATTN010000100.1 tRNAscan-SE tRNA 4936 5022 . + . ID=rna-HGK48_RS05620;Parent=gene-HGK48_RS05620;anticodon=(pos:4970..4972);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS05620;product=tRNA-Leu NZ_JAATTN010000100.1 tRNAscan-SE exon 4936 5022 . + . ID=exon-HGK48_RS05620-1;Parent=rna-HGK48_RS05620;anticodon=(pos:4970..4972);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS05620;product=tRNA-Leu NZ_JAATTN010000100.1 RefSeq direct_repeat 5381 5806 . + . ID=id-NZ_JAATTN010000100.1:5381..5806;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=5381..5411;rpt_unit_seq=tgtttgctaatgacaatgtttgtgttgaaac ##sequence-region NZ_JAATTN010000101.1 1 5763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000101.1 RefSeq region 1 5763 . + . ID=NZ_JAATTN010000101.1:1..5763;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000101.1 RefSeq gene 21 509 . + . ID=gene-HGK48_RS05625;Name=HGK48_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05625 NZ_JAATTN010000101.1 Protein Homology CDS 21 509 . + 0 ID=cds-WP_002849845.1;Parent=gene-HGK48_RS05625;Dbxref=GenBank:WP_002849845.1;Name=WP_002849845.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011990453.1;locus_tag=HGK48_RS05625;product=KdsC family phosphatase;protein_id=WP_002849845.1;transl_table=11 NZ_JAATTN010000101.1 RefSeq gene 488 1021 . + . ID=gene-HGK48_RS05630;Name=HGK48_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05630 NZ_JAATTN010000101.1 GeneMarkS-2+ CDS 488 1021 . + 0 ID=cds-WP_128973651.1;Parent=gene-HGK48_RS05630;Dbxref=GenBank:WP_128973651.1;Name=WP_128973651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05630;product=hypothetical protein;protein_id=WP_128973651.1;transl_table=11 NZ_JAATTN010000101.1 RefSeq gene 1003 1470 . + . ID=gene-HGK48_RS05635;Name=HGK48_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05635 NZ_JAATTN010000101.1 Protein Homology CDS 1003 1470 . + 0 ID=cds-WP_002849843.1;Parent=gene-HGK48_RS05635;Dbxref=GenBank:WP_002849843.1;Name=WP_002849843.1;Ontology_term=GO:0015920,GO:0001530,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732113.1;locus_tag=HGK48_RS05635;product=LptA/OstA family protein;protein_id=WP_002849843.1;transl_table=11 NZ_JAATTN010000101.1 RefSeq gene 1474 2070 . + . ID=gene-HGK48_RS05640;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=HGK48_RS05640 NZ_JAATTN010000101.1 Protein Homology CDS 1474 2070 . + 0 ID=cds-WP_002849842.1;Parent=gene-HGK48_RS05640;Dbxref=GenBank:WP_002849842.1;Name=WP_002849842.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849842.1;locus_tag=HGK48_RS05640;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_002849842.1;transl_table=11 NZ_JAATTN010000101.1 RefSeq gene 2077 2535 . + . ID=gene-HGK48_RS05645;Name=HGK48_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05645 NZ_JAATTN010000101.1 Protein Homology CDS 2077 2535 . + 0 ID=cds-WP_011732112.1;Parent=gene-HGK48_RS05645;Dbxref=GenBank:WP_011732112.1;Name=WP_011732112.1;Ontology_term=GO:0006526,GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732112.1;locus_tag=HGK48_RS05645;product=N-acetyltransferase;protein_id=WP_011732112.1;transl_table=11 NZ_JAATTN010000101.1 RefSeq gene 2502 2990 . + . ID=gene-HGK48_RS05650;Name=HGK48_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05650 NZ_JAATTN010000101.1 Protein Homology CDS 2502 2990 . + 0 ID=cds-WP_024305176.1;Parent=gene-HGK48_RS05650;Dbxref=GenBank:WP_024305176.1;Name=WP_024305176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849840.1;locus_tag=HGK48_RS05650;product=hypothetical protein;protein_id=WP_024305176.1;transl_table=11 NZ_JAATTN010000101.1 RefSeq gene 2987 4795 . + . ID=gene-HGK48_RS05655;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=HGK48_RS05655 NZ_JAATTN010000101.1 Protein Homology CDS 2987 4795 . + 0 ID=cds-WP_024305171.1;Parent=gene-HGK48_RS05655;Dbxref=GenBank:WP_024305171.1;Name=WP_024305171.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732110.1;locus_tag=HGK48_RS05655;product=penicillin-binding protein 2;protein_id=WP_024305171.1;transl_table=11 NZ_JAATTN010000101.1 RefSeq gene 4797 5060 . - . ID=gene-HGK48_RS05660;Name=HGK48_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05660 NZ_JAATTN010000101.1 Protein Homology CDS 4797 5060 . - 0 ID=cds-WP_002849839.1;Parent=gene-HGK48_RS05660;Dbxref=GenBank:WP_002849839.1;Name=WP_002849839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849839.1;locus_tag=HGK48_RS05660;product=FlhB-like flagellar biosynthesis protein;protein_id=WP_002849839.1;transl_table=11 NZ_JAATTN010000101.1 RefSeq pseudogene 5062 5763 . - . ID=gene-HGK48_RS05665;Name=HGK48_RS05665;end_range=5763,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS05665;partial=true;pseudo=true NZ_JAATTN010000101.1 GeneMarkS-2+ CDS 5062 5763 . - 0 ID=cds-HGK48_RS05665;Parent=gene-HGK48_RS05665;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5763,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05665;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000102.1 1 5743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000102.1 RefSeq region 1 5743 . + . ID=NZ_JAATTN010000102.1:1..5743;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000102.1 RefSeq gene 28 474 . + . ID=gene-HGK48_RS05670;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=HGK48_RS05670 NZ_JAATTN010000102.1 Protein Homology CDS 28 474 . + 0 ID=cds-WP_002848435.1;Parent=gene-HGK48_RS05670;Dbxref=GenBank:WP_002848435.1;Name=WP_002848435.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009649448.1;locus_tag=HGK48_RS05670;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_002848435.1;transl_table=11 NZ_JAATTN010000102.1 RefSeq gene 484 1269 . + . ID=gene-HGK48_RS05675;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=HGK48_RS05675 NZ_JAATTN010000102.1 Protein Homology CDS 484 1269 . + 0 ID=cds-WP_002848437.1;Parent=gene-HGK48_RS05675;Dbxref=GenBank:WP_002848437.1;Name=WP_002848437.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848437.1;locus_tag=HGK48_RS05675;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_002848437.1;transl_table=11 NZ_JAATTN010000102.1 RefSeq gene 1269 2489 . + . ID=gene-HGK48_RS05680;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=HGK48_RS05680 NZ_JAATTN010000102.1 Protein Homology CDS 1269 2489 . + 0 ID=cds-WP_002848439.1;Parent=gene-HGK48_RS05680;Dbxref=GenBank:WP_002848439.1;Name=WP_002848439.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848439.1;locus_tag=HGK48_RS05680;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_002848439.1;transl_table=11 NZ_JAATTN010000102.1 RefSeq gene 2503 3540 . + . ID=gene-HGK48_RS05685;Name=HGK48_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05685 NZ_JAATTN010000102.1 Protein Homology CDS 2503 3540 . + 0 ID=cds-WP_002848440.1;Parent=gene-HGK48_RS05685;Dbxref=GenBank:WP_002848440.1;Name=WP_002848440.1;Ontology_term=GO:0000902,GO:0008360,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=cell morphogenesis|0000902||IEA,regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343718.1;locus_tag=HGK48_RS05685;product=rod shape-determining protein;protein_id=WP_002848440.1;transl_table=11 NZ_JAATTN010000102.1 RefSeq gene 3530 4282 . + . ID=gene-HGK48_RS05690;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=HGK48_RS05690 NZ_JAATTN010000102.1 Protein Homology CDS 3530 4282 . + 0 ID=cds-WP_010399641.1;Parent=gene-HGK48_RS05690;Dbxref=GenBank:WP_010399641.1;Name=WP_010399641.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018137461.1;locus_tag=HGK48_RS05690;product=rod shape-determining protein MreC;protein_id=WP_010399641.1;transl_table=11 NZ_JAATTN010000102.1 RefSeq gene 4282 5743 . + . ID=gene-HGK48_RS05695;Name=carB;end_range=5743,.;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=HGK48_RS05695;partial=true NZ_JAATTN010000102.1 Protein Homology CDS 4282 5743 . + 0 ID=cds-WP_168236742.1;Parent=gene-HGK48_RS05695;Dbxref=GenBank:WP_168236742.1;Name=WP_168236742.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;end_range=5743,.;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343720.1;locus_tag=HGK48_RS05695;partial=true;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_168236742.1;transl_table=11 ##sequence-region NZ_JAATTN010000103.1 1 5708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000103.1 RefSeq region 1 5708 . + . ID=NZ_JAATTN010000103.1:1..5708;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000103.1 RefSeq pseudogene 1 131 . - . ID=gene-HGK48_RS05700;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=pseudogene;locus_tag=HGK48_RS05700;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000103.1 Protein Homology CDS 1 131 . - 0 ID=cds-HGK48_RS05700;Parent=gene-HGK48_RS05700;Note=part of 50S and 5S/L5/L18/L25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=rplE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847986.1;locus_tag=HGK48_RS05700;partial=true;product=50S ribosomal protein L5;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 134 367 . - . ID=gene-HGK48_RS05705;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=HGK48_RS05705 NZ_JAATTN010000103.1 Protein Homology CDS 134 367 . - 0 ID=cds-WP_002847984.1;Parent=gene-HGK48_RS05705;Dbxref=GenBank:WP_002847984.1;Name=WP_002847984.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847984.1;locus_tag=HGK48_RS05705;product=50S ribosomal protein L24;protein_id=WP_002847984.1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 367 735 . - . ID=gene-HGK48_RS05710;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=HGK48_RS05710 NZ_JAATTN010000103.1 Protein Homology CDS 367 735 . - 0 ID=cds-WP_002847983.1;Parent=gene-HGK48_RS05710;Dbxref=GenBank:WP_002847983.1;Name=WP_002847983.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015106543.1;locus_tag=HGK48_RS05710;product=50S ribosomal protein L14;protein_id=WP_002847983.1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 735 980 . - . ID=gene-HGK48_RS05715;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=HGK48_RS05715 NZ_JAATTN010000103.1 Protein Homology CDS 735 980 . - 0 ID=cds-WP_370510335.1;Parent=gene-HGK48_RS05715;Dbxref=GenBank:WP_370510335.1;Name=WP_370510335.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941511.1;locus_tag=HGK48_RS05715;product=30S ribosomal protein S17;protein_id=WP_370510335.1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 1003 1188 . - . ID=gene-HGK48_RS05720;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=HGK48_RS05720 NZ_JAATTN010000103.1 Protein Homology CDS 1003 1188 . - 0 ID=cds-WP_002847981.1;Parent=gene-HGK48_RS05720;Dbxref=GenBank:WP_002847981.1;Name=WP_002847981.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779440.1;locus_tag=HGK48_RS05720;product=50S ribosomal protein L29;protein_id=WP_002847981.1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 1175 1600 . - . ID=gene-HGK48_RS05725;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=HGK48_RS05725 NZ_JAATTN010000103.1 Protein Homology CDS 1175 1600 . - 0 ID=cds-WP_002847980.1;Parent=gene-HGK48_RS05725;Dbxref=GenBank:WP_002847980.1;Name=WP_002847980.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345066.1;locus_tag=HGK48_RS05725;product=50S ribosomal protein L16;protein_id=WP_002847980.1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 1603 2301 . - . ID=gene-HGK48_RS05730;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=HGK48_RS05730 NZ_JAATTN010000103.1 Protein Homology CDS 1603 2301 . - 0 ID=cds-WP_002847979.1;Parent=gene-HGK48_RS05730;Dbxref=GenBank:WP_002847979.1;Name=WP_002847979.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345067.1;locus_tag=HGK48_RS05730;product=30S ribosomal protein S3;protein_id=WP_002847979.1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 2303 2635 . - . ID=gene-HGK48_RS05735;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=HGK48_RS05735 NZ_JAATTN010000103.1 Protein Homology CDS 2303 2635 . - 0 ID=cds-WP_002847968.1;Parent=gene-HGK48_RS05735;Dbxref=GenBank:WP_002847968.1;Name=WP_002847968.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004275684.1;locus_tag=HGK48_RS05735;product=50S ribosomal protein L22;protein_id=WP_002847968.1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 2645 2926 . - . ID=gene-HGK48_RS05740;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=HGK48_RS05740 NZ_JAATTN010000103.1 Protein Homology CDS 2645 2926 . - 0 ID=cds-WP_002847965.1;Parent=gene-HGK48_RS05740;Dbxref=GenBank:WP_002847965.1;Name=WP_002847965.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345069.1;locus_tag=HGK48_RS05740;product=30S ribosomal protein S19;protein_id=WP_002847965.1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 2929 3759 . - . ID=gene-HGK48_RS05745;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=HGK48_RS05745 NZ_JAATTN010000103.1 Protein Homology CDS 2929 3759 . - 0 ID=cds-WP_011731683.1;Parent=gene-HGK48_RS05745;Dbxref=GenBank:WP_011731683.1;Name=WP_011731683.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012660814.1;locus_tag=HGK48_RS05745;product=50S ribosomal protein L2;protein_id=WP_011731683.1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 3761 4042 . - . ID=gene-HGK48_RS05750;Name=HGK48_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05750 NZ_JAATTN010000103.1 Protein Homology CDS 3761 4042 . - 0 ID=cds-WP_002847963.1;Parent=gene-HGK48_RS05750;Dbxref=GenBank:WP_002847963.1;Name=WP_002847963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345071.1;locus_tag=HGK48_RS05750;product=50S ribosomal protein L23;protein_id=WP_002847963.1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 4045 4659 . - . ID=gene-HGK48_RS05755;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=HGK48_RS05755 NZ_JAATTN010000103.1 Protein Homology CDS 4045 4659 . - 0 ID=cds-WP_002847960.1;Parent=gene-HGK48_RS05755;Dbxref=GenBank:WP_002847960.1;Name=WP_002847960.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345072.1;locus_tag=HGK48_RS05755;product=50S ribosomal protein L4;protein_id=WP_002847960.1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 4656 5234 . - . ID=gene-HGK48_RS05760;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=HGK48_RS05760 NZ_JAATTN010000103.1 Protein Homology CDS 4656 5234 . - 0 ID=cds-WP_002847959.1;Parent=gene-HGK48_RS05760;Dbxref=GenBank:WP_002847959.1;Name=WP_002847959.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345073.1;locus_tag=HGK48_RS05760;product=50S ribosomal protein L3;protein_id=WP_002847959.1;transl_table=11 NZ_JAATTN010000103.1 RefSeq gene 5253 5564 . - . ID=gene-HGK48_RS05765;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=HGK48_RS05765 NZ_JAATTN010000103.1 Protein Homology CDS 5253 5564 . - 0 ID=cds-WP_002847957.1;Parent=gene-HGK48_RS05765;Dbxref=GenBank:WP_002847957.1;Name=WP_002847957.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345074.1;locus_tag=HGK48_RS05765;product=30S ribosomal protein S10;protein_id=WP_002847957.1;transl_table=11 ##sequence-region NZ_JAATTN010000104.1 1 5559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000104.1 RefSeq region 1 5559 . + . ID=NZ_JAATTN010000104.1:1..5559;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000104.1 RefSeq gene 1 324 . + . ID=gene-HGK48_RS05770;Name=HGK48_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05770;partial=true;start_range=.,1 NZ_JAATTN010000104.1 GeneMarkS-2+ CDS 1 324 . + 0 ID=cds-WP_168236743.1;Parent=gene-HGK48_RS05770;Dbxref=GenBank:WP_168236743.1;Name=WP_168236743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05770;partial=true;product=hypothetical protein;protein_id=WP_168236743.1;start_range=.,1;transl_table=11 NZ_JAATTN010000104.1 RefSeq gene 325 705 . + . ID=gene-HGK48_RS05775;Name=HGK48_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05775 NZ_JAATTN010000104.1 Protein Homology CDS 325 705 . + 0 ID=cds-WP_029662383.1;Parent=gene-HGK48_RS05775;Dbxref=GenBank:WP_029662383.1;Name=WP_029662383.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: protein motif:HMM:NF016060.7;locus_tag=HGK48_RS05775;product=GtrA family protein;protein_id=WP_029662383.1;transl_table=11 NZ_JAATTN010000104.1 RefSeq gene 706 1698 . - . ID=gene-HGK48_RS05780;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=HGK48_RS05780 NZ_JAATTN010000104.1 Protein Homology CDS 706 1698 . - 0 ID=cds-WP_002850245.1;Parent=gene-HGK48_RS05780;Dbxref=GenBank:WP_002850245.1;Name=WP_002850245.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850245.1;locus_tag=HGK48_RS05780;product=UDP-glucose 4-epimerase GalE;protein_id=WP_002850245.1;transl_table=11 NZ_JAATTN010000104.1 RefSeq gene 1761 5555 . - . ID=gene-HGK48_RS05785;Name=HGK48_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05785 NZ_JAATTN010000104.1 Protein Homology CDS 1761 5555 . - 0 ID=cds-WP_394352679.1;Parent=gene-HGK48_RS05785;Dbxref=GenBank:WP_394352679.1;Name=WP_394352679.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867174.1;locus_tag=HGK48_RS05785;product=restriction endonuclease subunit S;protein_id=WP_394352679.1;transl_table=11 ##sequence-region NZ_JAATTN010000105.1 1 5605 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000105.1 RefSeq region 1 5605 . + . ID=NZ_JAATTN010000105.1:1..5605;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000105.1 RefSeq gene 1 159 . - . ID=gene-HGK48_RS05790;Name=HGK48_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05790;partial=true;start_range=.,1 NZ_JAATTN010000105.1 Protein Homology CDS 1 159 . - 0 ID=cds-WP_168236745.1;Parent=gene-HGK48_RS05790;Dbxref=GenBank:WP_168236745.1;Name=WP_168236745.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016647525.1;locus_tag=HGK48_RS05790;partial=true;product=ParA family protein;protein_id=WP_168236745.1;start_range=.,1;transl_table=11 NZ_JAATTN010000105.1 RefSeq gene 283 1359 . - . ID=gene-HGK48_RS05795;Name=HGK48_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05795 NZ_JAATTN010000105.1 Protein Homology CDS 283 1359 . - 0 ID=cds-WP_035170823.1;Parent=gene-HGK48_RS05795;Dbxref=GenBank:WP_035170823.1;Name=WP_035170823.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804892.1;locus_tag=HGK48_RS05795;product=Fic family protein;protein_id=WP_035170823.1;transl_table=11 NZ_JAATTN010000105.1 RefSeq gene 1621 2406 . - . ID=gene-HGK48_RS05800;Name=HGK48_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05800 NZ_JAATTN010000105.1 Protein Homology CDS 1621 2406 . - 0 ID=cds-WP_035170824.1;Parent=gene-HGK48_RS05800;Dbxref=GenBank:WP_035170824.1;Name=WP_035170824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017655.6;locus_tag=HGK48_RS05800;product=TraX family protein;protein_id=WP_035170824.1;transl_table=11 NZ_JAATTN010000105.1 RefSeq pseudogene 3269 3883 . - . ID=gene-HGK48_RS11215;Name=HGK48_RS11215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11215;partial=true;pseudo=true;start_range=.,3269 NZ_JAATTN010000105.1 Protein Homology CDS 3269 3883 . - 0 ID=cds-HGK48_RS11215;Parent=gene-HGK48_RS11215;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779836.1;locus_tag=HGK48_RS11215;partial=true;product=Fic/DOC family protein;pseudo=true;start_range=.,3269;transl_table=11 NZ_JAATTN010000105.1 RefSeq gene 3876 4112 . - . ID=gene-HGK48_RS05810;Name=HGK48_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05810 NZ_JAATTN010000105.1 Protein Homology CDS 3876 4112 . - 0 ID=cds-WP_035170834.1;Parent=gene-HGK48_RS05810;Dbxref=GenBank:WP_035170834.1;Name=WP_035170834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850985.1;locus_tag=HGK48_RS05810;product=hypothetical protein;protein_id=WP_035170834.1;transl_table=11 NZ_JAATTN010000105.1 RefSeq gene 4147 4404 . - . ID=gene-HGK48_RS05815;Name=HGK48_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05815 NZ_JAATTN010000105.1 Protein Homology CDS 4147 4404 . - 0 ID=cds-WP_035170835.1;Parent=gene-HGK48_RS05815;Dbxref=GenBank:WP_035170835.1;Name=WP_035170835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850985.1;locus_tag=HGK48_RS05815;product=antitoxin VbhA family protein;protein_id=WP_035170835.1;transl_table=11 NZ_JAATTN010000105.1 RefSeq gene 4414 4737 . - . ID=gene-HGK48_RS05820;Name=HGK48_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05820 NZ_JAATTN010000105.1 GeneMarkS-2+ CDS 4414 4737 . - 0 ID=cds-WP_035170836.1;Parent=gene-HGK48_RS05820;Dbxref=GenBank:WP_035170836.1;Name=WP_035170836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05820;product=hypothetical protein;protein_id=WP_035170836.1;transl_table=11 NZ_JAATTN010000105.1 RefSeq gene 4982 5530 . + . ID=gene-HGK48_RS05825;Name=HGK48_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05825 NZ_JAATTN010000105.1 GeneMarkS-2+ CDS 4982 5530 . + 0 ID=cds-WP_035170839.1;Parent=gene-HGK48_RS05825;Dbxref=GenBank:WP_035170839.1;Name=WP_035170839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05825;product=hypothetical protein;protein_id=WP_035170839.1;transl_table=11 ##sequence-region NZ_JAATTN010000106.1 1 5602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000106.1 RefSeq region 1 5602 . + . ID=NZ_JAATTN010000106.1:1..5602;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000106.1 RefSeq gene 1 553 . + . ID=gene-HGK48_RS05830;Name=HGK48_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05830;partial=true;start_range=.,1 NZ_JAATTN010000106.1 GeneMarkS-2+ CDS 1 553 . + 1 ID=cds-WP_240944818.1;Parent=gene-HGK48_RS05830;Dbxref=GenBank:WP_240944818.1;Name=WP_240944818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05830;partial=true;product=hypothetical protein;protein_id=WP_240944818.1;start_range=.,1;transl_table=11 NZ_JAATTN010000106.1 RefSeq gene 450 2123 . - . ID=gene-HGK48_RS05835;Name=HGK48_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05835 NZ_JAATTN010000106.1 Protein Homology CDS 450 2123 . - 0 ID=cds-WP_002848097.1;Parent=gene-HGK48_RS05835;Dbxref=GenBank:WP_002848097.1;Name=WP_002848097.1;Ontology_term=GO:0071555,GO:0008932,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: protein motif:HMM:NF013618.6;locus_tag=HGK48_RS05835;product=lytic transglycosylase domain-containing protein;protein_id=WP_002848097.1;transl_table=11 NZ_JAATTN010000106.1 RefSeq gene 2101 2397 . - . ID=gene-HGK48_RS05840;Name=HGK48_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05840 NZ_JAATTN010000106.1 Protein Homology CDS 2101 2397 . - 0 ID=cds-WP_024305271.1;Parent=gene-HGK48_RS05840;Dbxref=GenBank:WP_024305271.1;Name=WP_024305271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009294584.1;locus_tag=HGK48_RS05840;product=YggT family protein;protein_id=WP_024305271.1;transl_table=11 NZ_JAATTN010000106.1 RefSeq gene 2397 3686 . - . ID=gene-HGK48_RS05845;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=HGK48_RS05845 NZ_JAATTN010000106.1 Protein Homology CDS 2397 3686 . - 0 ID=cds-WP_002848095.1;Parent=gene-HGK48_RS05845;Dbxref=GenBank:WP_002848095.1;Name=WP_002848095.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848095.1;locus_tag=HGK48_RS05845;product=glutamate--tRNA ligase;protein_id=WP_002848095.1;transl_table=11 NZ_JAATTN010000106.1 RefSeq gene 3779 4450 . - . ID=gene-HGK48_RS05850;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=HGK48_RS05850 NZ_JAATTN010000106.1 Protein Homology CDS 3779 4450 . - 0 ID=cds-WP_002848093.1;Parent=gene-HGK48_RS05850;Dbxref=GenBank:WP_002848093.1;Name=WP_002848093.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848093.1;locus_tag=HGK48_RS05850;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_002848093.1;transl_table=11 NZ_JAATTN010000106.1 RefSeq gene 4450 5602 . - . ID=gene-HGK48_RS05855;Name=HGK48_RS05855;end_range=5602,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05855;partial=true NZ_JAATTN010000106.1 Protein Homology CDS 4450 5602 . - 1 ID=cds-WP_168236746.1;Parent=gene-HGK48_RS05855;Dbxref=GenBank:WP_168236746.1;Name=WP_168236746.1;Ontology_term=GO:0000271,GO:0016779;end_range=5602,.;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731695.1;locus_tag=HGK48_RS05855;partial=true;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_168236746.1;transl_table=11 ##sequence-region NZ_JAATTN010000107.1 1 5573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000107.1 RefSeq region 1 5573 . + . ID=NZ_JAATTN010000107.1:1..5573;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000107.1 RefSeq gene 1 561 . + . ID=gene-HGK48_RS05860;Name=HGK48_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05860;partial=true;start_range=.,1 NZ_JAATTN010000107.1 Protein Homology CDS 1 561 . + 0 ID=cds-WP_206120301.1;Parent=gene-HGK48_RS05860;Dbxref=GenBank:WP_206120301.1;Name=WP_206120301.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732054.1;locus_tag=HGK48_RS05860;partial=true;product=SLC13 family permease;protein_id=WP_206120301.1;start_range=.,1;transl_table=11 NZ_JAATTN010000107.1 RefSeq pseudogene 2456 2836 . + . ID=gene-HGK48_RS11530;Name=HGK48_RS11530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11530;partial=true;pseudo=true;start_range=.,2456 NZ_JAATTN010000107.1 Protein Homology CDS 2456 2836 . + 0 ID=cds-HGK48_RS11530;Parent=gene-HGK48_RS11530;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=HGK48_RS11530;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,2456;transl_table=11 NZ_JAATTN010000107.1 RefSeq gene 2894 3658 . - . ID=gene-HGK48_RS05870;Name=HGK48_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05870 NZ_JAATTN010000107.1 Protein Homology CDS 2894 3658 . - 0 ID=cds-WP_002849608.1;Parent=gene-HGK48_RS05870;Dbxref=GenBank:WP_002849608.1;Name=WP_002849608.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849608.1;locus_tag=HGK48_RS05870;product=RluA family pseudouridine synthase;protein_id=WP_002849608.1;transl_table=11 NZ_JAATTN010000107.1 RefSeq gene 3668 4798 . - . ID=gene-HGK48_RS05875;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=HGK48_RS05875 NZ_JAATTN010000107.1 Protein Homology CDS 3668 4798 . - 0 ID=cds-WP_024305186.1;Parent=gene-HGK48_RS05875;Dbxref=GenBank:WP_024305186.1;Name=WP_024305186.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941781.1;locus_tag=HGK48_RS05875;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_024305186.1;transl_table=11 NZ_JAATTN010000107.1 RefSeq gene 4795 5508 . - . ID=gene-HGK48_RS05880;Name=HGK48_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05880 NZ_JAATTN010000107.1 Protein Homology CDS 4795 5508 . - 0 ID=cds-WP_011732058.1;Parent=gene-HGK48_RS05880;Dbxref=GenBank:WP_011732058.1;Name=WP_011732058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732058.1;locus_tag=HGK48_RS05880;product=zinc ribbon domain-containing protein;protein_id=WP_011732058.1;transl_table=11 ##sequence-region NZ_JAATTN010000108.1 1 5567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000108.1 RefSeq region 1 5567 . + . ID=NZ_JAATTN010000108.1:1..5567;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000108.1 RefSeq pseudogene 58 1484 . - . ID=gene-HGK48_RS05885;Name=HGK48_RS05885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS05885;pseudo=true NZ_JAATTN010000108.1 Protein Homology CDS 58 1484 . - 0 ID=cds-HGK48_RS05885;Parent=gene-HGK48_RS05885;Note=frameshifted;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731972.1;locus_tag=HGK48_RS05885;product=alanine/glycine:cation symporter family protein;pseudo=true;transl_table=11 NZ_JAATTN010000108.1 RefSeq gene 1553 3628 . - . ID=gene-HGK48_RS05890;Name=HGK48_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05890 NZ_JAATTN010000108.1 Protein Homology CDS 1553 3628 . - 0 ID=cds-WP_168236748.1;Parent=gene-HGK48_RS05890;Dbxref=GenBank:WP_168236748.1;Name=WP_168236748.1;Ontology_term=GO:0006812,GO:0042625,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849303.1;locus_tag=HGK48_RS05890;product=heavy metal translocating P-type ATPase;protein_id=WP_168236748.1;transl_table=11 NZ_JAATTN010000108.1 RefSeq gene 3615 3902 . - . ID=gene-HGK48_RS05895;Name=HGK48_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05895 NZ_JAATTN010000108.1 Protein Homology CDS 3615 3902 . - 0 ID=cds-WP_002849304.1;Parent=gene-HGK48_RS05895;Dbxref=GenBank:WP_002849304.1;Name=WP_002849304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849304.1;locus_tag=HGK48_RS05895;product=YtxH domain-containing protein;protein_id=WP_002849304.1;transl_table=11 NZ_JAATTN010000108.1 RefSeq gene 3899 4201 . - . ID=gene-HGK48_RS05900;Name=HGK48_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05900 NZ_JAATTN010000108.1 GeneMarkS-2+ CDS 3899 4201 . - 0 ID=cds-WP_002849306.1;Parent=gene-HGK48_RS05900;Dbxref=GenBank:WP_002849306.1;Name=WP_002849306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05900;product=hypothetical protein;protein_id=WP_002849306.1;transl_table=11 NZ_JAATTN010000108.1 RefSeq gene 4234 4527 . - . ID=gene-HGK48_RS05905;Name=HGK48_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05905 NZ_JAATTN010000108.1 Protein Homology CDS 4234 4527 . - 0 ID=cds-WP_002849307.1;Parent=gene-HGK48_RS05905;Dbxref=GenBank:WP_002849307.1;Name=WP_002849307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942235.1;locus_tag=HGK48_RS05905;product=hypothetical protein;protein_id=WP_002849307.1;transl_table=11 NZ_JAATTN010000108.1 RefSeq gene 4520 5155 . - . ID=gene-HGK48_RS05910;Name=HGK48_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05910 NZ_JAATTN010000108.1 GeneMarkS-2+ CDS 4520 5155 . - 0 ID=cds-WP_011731973.1;Parent=gene-HGK48_RS05910;Dbxref=GenBank:WP_011731973.1;Name=WP_011731973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05910;product=hypothetical protein;protein_id=WP_011731973.1;transl_table=11 NZ_JAATTN010000108.1 RefSeq gene 5145 5468 . - . ID=gene-HGK48_RS05915;Name=HGK48_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05915 NZ_JAATTN010000108.1 Protein Homology CDS 5145 5468 . - 0 ID=cds-WP_002849309.1;Parent=gene-HGK48_RS05915;Dbxref=GenBank:WP_002849309.1;Name=WP_002849309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849309.1;locus_tag=HGK48_RS05915;product=HMA2 domain-containing protein;protein_id=WP_002849309.1;transl_table=11 ##sequence-region NZ_JAATTN010000109.1 1 5556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000109.1 RefSeq region 1 5556 . + . ID=NZ_JAATTN010000109.1:1..5556;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000109.1 RefSeq gene 1 672 . - . ID=gene-HGK48_RS05920;Name=HGK48_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05920;partial=true;start_range=.,1 NZ_JAATTN010000109.1 Protein Homology CDS 1 672 . - 0 ID=cds-WP_168236749.1;Parent=gene-HGK48_RS05920;Dbxref=GenBank:WP_168236749.1;Name=WP_168236749.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731876.1;locus_tag=HGK48_RS05920;partial=true;product=MFS transporter;protein_id=WP_168236749.1;start_range=.,1;transl_table=11 NZ_JAATTN010000109.1 RefSeq gene 676 1119 . - . ID=gene-HGK48_RS05925;Name=HGK48_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05925 NZ_JAATTN010000109.1 Protein Homology CDS 676 1119 . - 0 ID=cds-WP_002848983.1;Parent=gene-HGK48_RS05925;Dbxref=GenBank:WP_002848983.1;Name=WP_002848983.1;Ontology_term=GO:0006144,GO:0106130;gbkey=CDS;go_function=purine phosphoribosyltransferase activity|0106130||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869334.1;locus_tag=HGK48_RS05925;product=phosphoribosyltransferase;protein_id=WP_002848983.1;transl_table=11 NZ_JAATTN010000109.1 RefSeq gene 1129 2460 . - . ID=gene-HGK48_RS05930;Name=HGK48_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05930 NZ_JAATTN010000109.1 Protein Homology CDS 1129 2460 . - 0 ID=cds-WP_002848985.1;Parent=gene-HGK48_RS05930;Dbxref=GenBank:WP_002848985.1;Name=WP_002848985.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848985.1;locus_tag=HGK48_RS05930;product=NCS2 family permease;protein_id=WP_002848985.1;transl_table=11 NZ_JAATTN010000109.1 RefSeq gene 2470 3552 . - . ID=gene-HGK48_RS05935;Name=mqnE;gbkey=Gene;gene=mqnE;gene_biotype=protein_coding;locus_tag=HGK48_RS05935 NZ_JAATTN010000109.1 Protein Homology CDS 2470 3552 . - 0 ID=cds-WP_002848987.1;Parent=gene-HGK48_RS05935;Dbxref=GenBank:WP_002848987.1;Name=WP_002848987.1;Ontology_term=GO:0009234,GO:0016765,GO:0051536;gbkey=CDS;gene=mqnE;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848987.1;locus_tag=HGK48_RS05935;product=aminofutalosine synthase MqnE;protein_id=WP_002848987.1;transl_table=11 NZ_JAATTN010000109.1 RefSeq gene 3662 5556 . + . ID=gene-HGK48_RS05940;Name=HGK48_RS05940;end_range=5556,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05940;partial=true NZ_JAATTN010000109.1 Protein Homology CDS 3662 5556 . + 0 ID=cds-WP_168236750.1;Parent=gene-HGK48_RS05940;Dbxref=GenBank:WP_168236750.1;Name=WP_168236750.1;Ontology_term=GO:0016779;end_range=5556,.;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: protein motif:HMM:NF019935.6;locus_tag=HGK48_RS05940;partial=true;product=[protein-PII] uridylyltransferase family protein;protein_id=WP_168236750.1;transl_table=11 ##sequence-region NZ_JAATTN010000010.1 1 16796 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000010.1 RefSeq region 1 16796 . + . ID=NZ_JAATTN010000010.1:1..16796;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000010.1 RefSeq gene 1 541 . + . ID=gene-HGK48_RS01145;Name=HGK48_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01145;partial=true;start_range=.,1 NZ_JAATTN010000010.1 GeneMarkS-2+ CDS 1 541 . + 1 ID=cds-WP_168236637.1;Parent=gene-HGK48_RS01145;Dbxref=GenBank:WP_168236637.1;Name=WP_168236637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01145;partial=true;product=hypothetical protein;protein_id=WP_168236637.1;start_range=.,1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 541 1029 . + . ID=gene-HGK48_RS01150;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=HGK48_RS01150 NZ_JAATTN010000010.1 Protein Homology CDS 541 1029 . + 0 ID=cds-WP_002848105.1;Parent=gene-HGK48_RS01150;Dbxref=GenBank:WP_002848105.1;Name=WP_002848105.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848105.1;locus_tag=HGK48_RS01150;product=flavodoxin FldA;protein_id=WP_002848105.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 1138 1638 . + . ID=gene-HGK48_RS01155;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=HGK48_RS01155 NZ_JAATTN010000010.1 Protein Homology CDS 1138 1638 . + 0 ID=cds-WP_002848106.1;Parent=gene-HGK48_RS01155;Dbxref=GenBank:WP_002848106.1;Name=WP_002848106.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848106.1;locus_tag=HGK48_RS01155;product=S-ribosylhomocysteine lyase;protein_id=WP_002848106.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 1721 2419 . - . ID=gene-HGK48_RS01160;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=HGK48_RS01160 NZ_JAATTN010000010.1 Protein Homology CDS 1721 2419 . - 0 ID=cds-WP_002848107.1;Parent=gene-HGK48_RS01160;Dbxref=GenBank:WP_002848107.1;Name=WP_002848107.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848107.1;locus_tag=HGK48_RS01160;product=uracil-DNA glycosylase;protein_id=WP_002848107.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 2459 2812 . - . ID=gene-HGK48_RS01165;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=HGK48_RS01165 NZ_JAATTN010000010.1 Protein Homology CDS 2459 2812 . - 0 ID=cds-WP_002848108.1;Parent=gene-HGK48_RS01165;Dbxref=GenBank:WP_002848108.1;Name=WP_002848108.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343687.1;locus_tag=HGK48_RS01165;product=50S ribosomal protein L20;protein_id=WP_002848108.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 2899 3090 . - . ID=gene-HGK48_RS01170;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=HGK48_RS01170 NZ_JAATTN010000010.1 Protein Homology CDS 2899 3090 . - 0 ID=cds-WP_002848109.1;Parent=gene-HGK48_RS01170;Dbxref=GenBank:WP_002848109.1;Name=WP_002848109.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343686.1;locus_tag=HGK48_RS01170;product=50S ribosomal protein L35;protein_id=WP_002848109.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 3265 4272 . + . ID=gene-HGK48_RS01175;Name=HGK48_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01175 NZ_JAATTN010000010.1 Protein Homology CDS 3265 4272 . + 0 ID=cds-WP_011731699.1;Parent=gene-HGK48_RS01175;Dbxref=GenBank:WP_011731699.1;Name=WP_011731699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009881850.1;locus_tag=HGK48_RS01175;product=Fe(3+) ABC transporter substrate-binding protein;protein_id=WP_011731699.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 4273 5829 . + . ID=gene-HGK48_RS01180;Name=HGK48_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01180 NZ_JAATTN010000010.1 Protein Homology CDS 4273 5829 . + 0 ID=cds-WP_011731700.1;Parent=gene-HGK48_RS01180;Dbxref=GenBank:WP_011731700.1;Name=WP_011731700.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731700.1;locus_tag=HGK48_RS01180;product=ABC transporter permease;protein_id=WP_011731700.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 5889 7304 . - . ID=gene-HGK48_RS01185;Name=HGK48_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01185 NZ_JAATTN010000010.1 Protein Homology CDS 5889 7304 . - 0 ID=cds-WP_002848112.1;Parent=gene-HGK48_RS01185;Dbxref=GenBank:WP_002848112.1;Name=WP_002848112.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848112.1;locus_tag=HGK48_RS01185;product=efflux transporter outer membrane subunit;protein_id=WP_002848112.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 7297 10443 . - . ID=gene-HGK48_RS01190;Name=HGK48_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01190 NZ_JAATTN010000010.1 Protein Homology CDS 7297 10443 . - 0 ID=cds-WP_002848113.1;Parent=gene-HGK48_RS01190;Dbxref=GenBank:WP_002848113.1;Name=WP_002848113.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848113.1;locus_tag=HGK48_RS01190;product=efflux RND transporter permease subunit;protein_id=WP_002848113.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 10443 11564 . - . ID=gene-HGK48_RS01195;Name=HGK48_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01195 NZ_JAATTN010000010.1 Protein Homology CDS 10443 11564 . - 0 ID=cds-WP_002848114.1;Parent=gene-HGK48_RS01195;Dbxref=GenBank:WP_002848114.1;Name=WP_002848114.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848114.1;locus_tag=HGK48_RS01195;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_002848114.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 11694 12335 . - . ID=gene-HGK48_RS01200;Name=HGK48_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01200 NZ_JAATTN010000010.1 Protein Homology CDS 11694 12335 . - 0 ID=cds-WP_010397601.1;Parent=gene-HGK48_RS01200;Dbxref=GenBank:WP_010397601.1;Name=WP_010397601.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025605.6;locus_tag=HGK48_RS01200;product=TetR/AcrR family transcriptional regulator;protein_id=WP_010397601.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 12328 13731 . - . ID=gene-HGK48_RS01205;Name=ccoG;gbkey=Gene;gene=ccoG;gene_biotype=protein_coding;locus_tag=HGK48_RS01205 NZ_JAATTN010000010.1 Protein Homology CDS 12328 13731 . - 0 ID=cds-WP_024305273.1;Parent=gene-HGK48_RS01205;Dbxref=GenBank:WP_024305273.1;Name=WP_024305273.1;Ontology_term=GO:0008535,GO:0016020;gbkey=CDS;gene=ccoG;go_component=membrane|0016020||IEA;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731704.1;locus_tag=HGK48_RS01205;product=cytochrome c oxidase accessory protein CcoG;protein_id=WP_024305273.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 13889 14101 . + . ID=gene-HGK48_RS01210;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=HGK48_RS01210 NZ_JAATTN010000010.1 Protein Homology CDS 13889 14101 . + 0 ID=cds-WP_002848116.1;Parent=gene-HGK48_RS01210;Dbxref=GenBank:WP_002848116.1;Name=WP_002848116.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343807.1;locus_tag=HGK48_RS01210;product=30S ribosomal protein S21;protein_id=WP_002848116.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 14208 14672 . - . ID=gene-HGK48_RS01215;Name=HGK48_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01215 NZ_JAATTN010000010.1 Protein Homology CDS 14208 14672 . - 0 ID=cds-WP_011731705.1;Parent=gene-HGK48_RS01215;Dbxref=GenBank:WP_011731705.1;Name=WP_011731705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731705.1;locus_tag=HGK48_RS01215;product=hydrogenase 3 maturation endopeptidase HyCI;protein_id=WP_011731705.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 14675 15016 . - . ID=gene-HGK48_RS01220;Name=HGK48_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01220 NZ_JAATTN010000010.1 Protein Homology CDS 14675 15016 . - 0 ID=cds-WP_002848118.1;Parent=gene-HGK48_RS01220;Dbxref=GenBank:WP_002848118.1;Name=WP_002848118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848118.1;locus_tag=HGK48_RS01220;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_002848118.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 15013 15828 . - . ID=gene-HGK48_RS01225;Name=HGK48_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01225 NZ_JAATTN010000010.1 Protein Homology CDS 15013 15828 . - 0 ID=cds-WP_002848119.1;Parent=gene-HGK48_RS01225;Dbxref=GenBank:WP_002848119.1;Name=WP_002848119.1;Ontology_term=GO:0022900,GO:0008137,GO:0048038,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,quinone binding|0048038||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848119.1;locus_tag=HGK48_RS01225;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_002848119.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 15828 16358 . - . ID=gene-HGK48_RS01230;Name=HGK48_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01230 NZ_JAATTN010000010.1 Protein Homology CDS 15828 16358 . - 0 ID=cds-WP_002848120.1;Parent=gene-HGK48_RS01230;Dbxref=GenBank:WP_002848120.1;Name=WP_002848120.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848120.1;locus_tag=HGK48_RS01230;product=formate hydrogenlyase complex iron-sulfur subunit;protein_id=WP_002848120.1;transl_table=11 NZ_JAATTN010000010.1 RefSeq gene 16355 16796 . - . ID=gene-HGK48_RS01235;Name=HGK48_RS01235;end_range=16796,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01235;partial=true NZ_JAATTN010000010.1 Protein Homology CDS 16355 16796 . - 1 ID=cds-WP_457550916.1;Parent=gene-HGK48_RS01235;Dbxref=GenBank:WP_457550916.1;Name=WP_457550916.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;end_range=16796,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848121.1;locus_tag=HGK48_RS01235;partial=true;product=NADH-quinone oxidoreductase subunit D-related protein;protein_id=WP_457550916.1;transl_table=11 ##sequence-region NZ_JAATTN010000110.1 1 5492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000110.1 RefSeq region 1 5492 . + . ID=NZ_JAATTN010000110.1:1..5492;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000110.1 RefSeq gene 1 1310 . - . ID=gene-HGK48_RS05945;Name=HGK48_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05945;partial=true;start_range=.,1 NZ_JAATTN010000110.1 Protein Homology CDS 1 1310 . - 0 ID=cds-WP_168236751.1;Parent=gene-HGK48_RS05945;Dbxref=GenBank:WP_168236751.1;Name=WP_168236751.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848901.1;locus_tag=HGK48_RS05945;partial=true;product=sodium-dependent transporter;protein_id=WP_168236751.1;start_range=.,1;transl_table=11 NZ_JAATTN010000110.1 RefSeq gene 1320 3254 . - . ID=gene-HGK48_RS05950;Name=abc-f;gbkey=Gene;gene=abc-f;gene_biotype=protein_coding;locus_tag=HGK48_RS05950 NZ_JAATTN010000110.1 Protein Homology CDS 1320 3254 . - 0 ID=cds-WP_011731861.1;Parent=gene-HGK48_RS05950;Dbxref=GenBank:WP_011731861.1;Name=WP_011731861.1;Ontology_term=GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=abc-f;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731861.1;locus_tag=HGK48_RS05950;product=ribosomal protection-like ABC-F family protein;protein_id=WP_011731861.1;transl_table=11 NZ_JAATTN010000110.1 RefSeq gene 3258 4556 . - . ID=gene-HGK48_RS05955;Name=HGK48_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05955 NZ_JAATTN010000110.1 Protein Homology CDS 3258 4556 . - 0 ID=cds-WP_002848899.1;Parent=gene-HGK48_RS05955;Dbxref=GenBank:WP_002848899.1;Name=WP_002848899.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848899.1;locus_tag=HGK48_RS05955;product=MFS transporter;protein_id=WP_002848899.1;transl_table=11 NZ_JAATTN010000110.1 RefSeq gene 4760 5428 . + . ID=gene-HGK48_RS05960;Name=HGK48_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05960 NZ_JAATTN010000110.1 Protein Homology CDS 4760 5428 . + 0 ID=cds-WP_002848897.1;Parent=gene-HGK48_RS05960;Dbxref=GenBank:WP_002848897.1;Name=WP_002848897.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848897.1;locus_tag=HGK48_RS05960;product=response regulator transcription factor;protein_id=WP_002848897.1;transl_table=11 ##sequence-region NZ_JAATTN010000111.1 1 5467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000111.1 RefSeq region 1 5467 . + . ID=NZ_JAATTN010000111.1:1..5467;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000111.1 RefSeq pseudogene 1 317 . + . ID=gene-HGK48_RS05965;Name=HGK48_RS05965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS05965;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000111.1 GeneMarkS-2+ CDS 1 317 . + 2 ID=cds-HGK48_RS05965;Parent=gene-HGK48_RS05965;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05965;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000111.1 RefSeq gene 314 832 . + . ID=gene-HGK48_RS05970;Name=HGK48_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05970 NZ_JAATTN010000111.1 Protein Homology CDS 314 832 . + 0 ID=cds-WP_002850747.1;Parent=gene-HGK48_RS05970;Dbxref=GenBank:WP_002850747.1;Name=WP_002850747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850747.1;locus_tag=HGK48_RS05970;product=RAMP superfamily CRISPR-associated protein;protein_id=WP_002850747.1;transl_table=11 NZ_JAATTN010000111.1 RefSeq gene 829 2184 . + . ID=gene-HGK48_RS05975;Name=HGK48_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05975 NZ_JAATTN010000111.1 GeneMarkS-2+ CDS 829 2184 . + 0 ID=cds-WP_002850748.1;Parent=gene-HGK48_RS05975;Dbxref=GenBank:WP_002850748.1;Name=WP_002850748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05975;product=hypothetical protein;protein_id=WP_002850748.1;transl_table=11 NZ_JAATTN010000111.1 RefSeq gene 2174 3526 . + . ID=gene-HGK48_RS05980;Name=HGK48_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05980 NZ_JAATTN010000111.1 Protein Homology CDS 2174 3526 . + 0 ID=cds-WP_002850750.1;Parent=gene-HGK48_RS05980;Dbxref=GenBank:WP_002850750.1;Name=WP_002850750.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015728.6;locus_tag=HGK48_RS05980;product=RAMP superfamily CRISPR-associated protein;protein_id=WP_002850750.1;transl_table=11 NZ_JAATTN010000111.1 RefSeq gene 3523 3960 . + . ID=gene-HGK48_RS05985;Name=HGK48_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05985 NZ_JAATTN010000111.1 Protein Homology CDS 3523 3960 . + 0 ID=cds-WP_002850752.1;Parent=gene-HGK48_RS05985;Dbxref=GenBank:WP_002850752.1;Name=WP_002850752.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04423.1;locus_tag=HGK48_RS05985;product=TIGR04423 family type III CRISPR-associated protein;protein_id=WP_002850752.1;transl_table=11 NZ_JAATTN010000111.1 RefSeq gene 3957 5462 . + . ID=gene-HGK48_RS05990;Name=HGK48_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05990 NZ_JAATTN010000111.1 Protein Homology CDS 3957 5462 . + 0 ID=cds-WP_002850754.1;Parent=gene-HGK48_RS05990;Dbxref=GenBank:WP_002850754.1;Name=WP_002850754.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03986.1;locus_tag=HGK48_RS05990;product=TIGR03986 family type III CRISPR-associated RAMP protein;protein_id=WP_002850754.1;transl_table=11 ##sequence-region NZ_JAATTN010000112.1 1 5433 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000112.1 RefSeq region 1 5433 . + . ID=NZ_JAATTN010000112.1:1..5433;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000112.1 RefSeq gene 1 181 . - . ID=gene-HGK48_RS05995;Name=HGK48_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05995;partial=true;start_range=.,1 NZ_JAATTN010000112.1 Protein Homology CDS 1 181 . - 0 ID=cds-WP_240944819.1;Parent=gene-HGK48_RS05995;Dbxref=GenBank:WP_240944819.1;Name=WP_240944819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848059.1;locus_tag=HGK48_RS05995;partial=true;product=YigZ family protein;protein_id=WP_240944819.1;start_range=.,1;transl_table=11 NZ_JAATTN010000112.1 RefSeq pseudogene 165 1058 . + . ID=gene-HGK48_RS06000;Name=HGK48_RS06000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS06000;partial=true;pseudo=true;start_range=.,165 NZ_JAATTN010000112.1 Protein Homology CDS 165 1058 . + 0 ID=cds-HGK48_RS06000;Parent=gene-HGK48_RS06000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849665.1;locus_tag=HGK48_RS06000;partial=true;product=DegT/DnrJ/EryC1/StrS family aminotransferase;pseudo=true;start_range=.,165;transl_table=11 NZ_JAATTN010000112.1 RefSeq gene 1051 1995 . + . ID=gene-HGK48_RS06005;Name=HGK48_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06005 NZ_JAATTN010000112.1 Protein Homology CDS 1051 1995 . + 0 ID=cds-WP_011732071.1;Parent=gene-HGK48_RS06005;Dbxref=GenBank:WP_011732071.1;Name=WP_011732071.1;Ontology_term=GO:0009245,GO:0005524,GO:0009029;gbkey=CDS;go_function=ATP binding|0005524||IEA,lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732071.1;locus_tag=HGK48_RS06005;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_011732071.1;transl_table=11 NZ_JAATTN010000112.1 RefSeq gene 2021 2863 . + . ID=gene-HGK48_RS06010;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=HGK48_RS06010 NZ_JAATTN010000112.1 Protein Homology CDS 2021 2863 . + 0 ID=cds-WP_002849668.1;Parent=gene-HGK48_RS06010;Dbxref=GenBank:WP_002849668.1;Name=WP_002849668.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849668.1;locus_tag=HGK48_RS06010;product=acetylglutamate kinase;protein_id=WP_002849668.1;transl_table=11 NZ_JAATTN010000112.1 RefSeq gene 2860 4602 . + . ID=gene-HGK48_RS06015;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=HGK48_RS06015 NZ_JAATTN010000112.1 Protein Homology CDS 2860 4602 . + 0 ID=cds-WP_002849670.1;Parent=gene-HGK48_RS06015;Dbxref=GenBank:WP_002849670.1;Name=WP_002849670.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849670.1;locus_tag=HGK48_RS06015;product=threonine synthase;protein_id=WP_002849670.1;transl_table=11 NZ_JAATTN010000112.1 RefSeq gene 4599 5321 . + . ID=gene-HGK48_RS06020;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=HGK48_RS06020 NZ_JAATTN010000112.1 Protein Homology CDS 4599 5321 . + 0 ID=cds-WP_002849673.1;Parent=gene-HGK48_RS06020;Dbxref=GenBank:WP_002849673.1;Name=WP_002849673.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732072.1;locus_tag=HGK48_RS06020;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_002849673.1;transl_table=11 ##sequence-region NZ_JAATTN010000113.1 1 5418 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000113.1 RefSeq region 1 5418 . + . ID=NZ_JAATTN010000113.1:1..5418;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000113.1 RefSeq gene 81 1226 . - . ID=gene-HGK48_RS06025;Name=HGK48_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06025 NZ_JAATTN010000113.1 Protein Homology CDS 81 1226 . - 0 ID=cds-WP_025370359.1;Parent=gene-HGK48_RS06025;Dbxref=GenBank:WP_025370359.1;Name=WP_025370359.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=HGK48_RS06025;product=methyl-accepting chemotaxis protein;protein_id=WP_025370359.1;transl_table=11 NZ_JAATTN010000113.1 RefSeq gene 1389 1946 . + . ID=gene-HGK48_RS06030;Name=HGK48_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06030 NZ_JAATTN010000113.1 Protein Homology CDS 1389 1946 . + 0 ID=cds-WP_002849917.1;Parent=gene-HGK48_RS06030;Dbxref=GenBank:WP_002849917.1;Name=WP_002849917.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849917.1;locus_tag=HGK48_RS06030;product=SCO family protein;protein_id=WP_002849917.1;transl_table=11 NZ_JAATTN010000113.1 RefSeq gene 1943 3049 . - . ID=gene-HGK48_RS06035;Name=HGK48_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06035 NZ_JAATTN010000113.1 Protein Homology CDS 1943 3049 . - 0 ID=cds-WP_002849915.1;Parent=gene-HGK48_RS06035;Dbxref=GenBank:WP_002849915.1;Name=WP_002849915.1;Ontology_term=GO:0008360,GO:0008955;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009294290.1;locus_tag=HGK48_RS06035;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_002849915.1;transl_table=11 NZ_JAATTN010000113.1 RefSeq gene 3101 4072 . + . ID=gene-HGK48_RS06040;Name=HGK48_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06040 NZ_JAATTN010000113.1 Protein Homology CDS 3101 4072 . + 0 ID=cds-WP_002849913.1;Parent=gene-HGK48_RS06040;Dbxref=GenBank:WP_002849913.1;Name=WP_002849913.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732126.1;locus_tag=HGK48_RS06040;product=RluA family pseudouridine synthase;protein_id=WP_002849913.1;transl_table=11 NZ_JAATTN010000113.1 RefSeq gene 4005 5219 . + . ID=gene-HGK48_RS06045;Name=HGK48_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06045 NZ_JAATTN010000113.1 Protein Homology CDS 4005 5219 . + 0 ID=cds-WP_002849911.1;Parent=gene-HGK48_RS06045;Dbxref=GenBank:WP_002849911.1;Name=WP_002849911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849911.1;locus_tag=HGK48_RS06045;product=fibronectin type III domain-containing protein;protein_id=WP_002849911.1;transl_table=11 NZ_JAATTN010000113.1 RefSeq pseudogene 5219 5418 . + . ID=gene-HGK48_RS06050;Name=HGK48_RS06050;end_range=5418,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS06050;partial=true;pseudo=true NZ_JAATTN010000113.1 Protein Homology CDS 5219 5418 . + 0 ID=cds-HGK48_RS06050;Parent=gene-HGK48_RS06050;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5418,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849909.1;locus_tag=HGK48_RS06050;partial=true;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000114.1 1 5357 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000114.1 RefSeq region 1 5357 . + . ID=NZ_JAATTN010000114.1:1..5357;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000114.1 RefSeq gene 337 421 . - . ID=gene-HGK48_RS06055;Name=HGK48_RS06055;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06055 NZ_JAATTN010000114.1 tRNAscan-SE tRNA 337 421 . - . ID=rna-HGK48_RS06055;Parent=gene-HGK48_RS06055;anticodon=(pos:complement(385..387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06055;product=tRNA-Leu NZ_JAATTN010000114.1 tRNAscan-SE exon 337 421 . - . ID=exon-HGK48_RS06055-1;Parent=rna-HGK48_RS06055;anticodon=(pos:complement(385..387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06055;product=tRNA-Leu NZ_JAATTN010000114.1 RefSeq gene 432 508 . - . ID=gene-HGK48_RS06060;Name=HGK48_RS06060;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06060 NZ_JAATTN010000114.1 tRNAscan-SE tRNA 432 508 . - . ID=rna-HGK48_RS06060;Parent=gene-HGK48_RS06060;anticodon=(pos:complement(472..474));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06060;product=tRNA-Arg NZ_JAATTN010000114.1 tRNAscan-SE exon 432 508 . - . ID=exon-HGK48_RS06060-1;Parent=rna-HGK48_RS06060;anticodon=(pos:complement(472..474));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06060;product=tRNA-Arg NZ_JAATTN010000114.1 RefSeq gene 563 639 . - . ID=gene-HGK48_RS06065;Name=HGK48_RS06065;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06065 NZ_JAATTN010000114.1 tRNAscan-SE tRNA 563 639 . - . ID=rna-HGK48_RS06065;Parent=gene-HGK48_RS06065;anticodon=(pos:complement(603..605));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06065;product=tRNA-Arg NZ_JAATTN010000114.1 tRNAscan-SE exon 563 639 . - . ID=exon-HGK48_RS06065-1;Parent=rna-HGK48_RS06065;anticodon=(pos:complement(603..605));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06065;product=tRNA-Arg NZ_JAATTN010000114.1 RefSeq gene 664 740 . - . ID=gene-HGK48_RS06070;Name=HGK48_RS06070;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06070 NZ_JAATTN010000114.1 tRNAscan-SE tRNA 664 740 . - . ID=rna-HGK48_RS06070;Parent=gene-HGK48_RS06070;anticodon=(pos:complement(704..706));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06070;product=tRNA-His NZ_JAATTN010000114.1 tRNAscan-SE exon 664 740 . - . ID=exon-HGK48_RS06070-1;Parent=rna-HGK48_RS06070;anticodon=(pos:complement(704..706));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06070;product=tRNA-His NZ_JAATTN010000114.1 RefSeq gene 745 822 . - . ID=gene-HGK48_RS06075;Name=HGK48_RS06075;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06075 NZ_JAATTN010000114.1 tRNAscan-SE tRNA 745 822 . - . ID=rna-HGK48_RS06075;Parent=gene-HGK48_RS06075;anticodon=(pos:complement(785..787));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06075;product=tRNA-Pro NZ_JAATTN010000114.1 tRNAscan-SE exon 745 822 . - . ID=exon-HGK48_RS06075-1;Parent=rna-HGK48_RS06075;anticodon=(pos:complement(785..787));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06075;product=tRNA-Pro NZ_JAATTN010000114.1 RefSeq gene 942 1661 . - . ID=gene-HGK48_RS06080;Name=HGK48_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06080 NZ_JAATTN010000114.1 Protein Homology CDS 942 1661 . - 0 ID=cds-WP_002850756.1;Parent=gene-HGK48_RS06080;Dbxref=GenBank:WP_002850756.1;Name=WP_002850756.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850756.1;locus_tag=HGK48_RS06080;product=TerC family protein;protein_id=WP_002850756.1;transl_table=11 NZ_JAATTN010000114.1 RefSeq gene 1654 2241 . - . ID=gene-HGK48_RS06085;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=HGK48_RS06085 NZ_JAATTN010000114.1 Protein Homology CDS 1654 2241 . - 0 ID=cds-WP_002850758.1;Parent=gene-HGK48_RS06085;Dbxref=GenBank:WP_002850758.1;Name=WP_002850758.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850758.1;locus_tag=HGK48_RS06085;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_002850758.1;transl_table=11 NZ_JAATTN010000114.1 RefSeq gene 2232 3617 . - . ID=gene-HGK48_RS11380;Name=HGK48_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11380 NZ_JAATTN010000114.1 Protein Homology CDS 2232 3617 . - 0 ID=cds-WP_010402100.1;Parent=gene-HGK48_RS11380;Dbxref=GenBank:WP_010402100.1;Name=WP_010402100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732308.1;locus_tag=HGK48_RS11380;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_010402100.1;transl_table=11 NZ_JAATTN010000114.1 RefSeq gene 3614 5128 . - . ID=gene-HGK48_RS06095;Name=HGK48_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06095 NZ_JAATTN010000114.1 Protein Homology CDS 3614 5128 . - 0 ID=cds-WP_002850760.1;Parent=gene-HGK48_RS06095;Dbxref=GenBank:WP_002850760.1;Name=WP_002850760.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850760.1;locus_tag=HGK48_RS06095;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_002850760.1;transl_table=11 NZ_JAATTN010000114.1 RefSeq pseudogene 5125 5357 . - . ID=gene-HGK48_RS06100;Name=HGK48_RS06100;end_range=5357,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS06100;partial=true;pseudo=true NZ_JAATTN010000114.1 Protein Homology CDS 5125 5357 . - 0 ID=cds-HGK48_RS06100;Parent=gene-HGK48_RS06100;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0042586;end_range=5357,.;gbkey=CDS;go_function=peptide deformylase activity|0042586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850762.1;locus_tag=HGK48_RS06100;partial=true;product=peptide deformylase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000115.1 1 5316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000115.1 RefSeq region 1 5316 . + . ID=NZ_JAATTN010000115.1:1..5316;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000115.1 RefSeq gene 138 773 . - . ID=gene-HGK48_RS06105;Name=HGK48_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06105 NZ_JAATTN010000115.1 Protein Homology CDS 138 773 . - 0 ID=cds-WP_002850735.1;Parent=gene-HGK48_RS06105;Dbxref=GenBank:WP_002850735.1;Name=WP_002850735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850735.1;locus_tag=HGK48_RS06105;product=UPF0323 family lipoprotein;protein_id=WP_002850735.1;transl_table=11 NZ_JAATTN010000115.1 RefSeq gene 770 1384 . - . ID=gene-HGK48_RS06110;Name=HGK48_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06110 NZ_JAATTN010000115.1 GeneMarkS-2+ CDS 770 1384 . - 0 ID=cds-WP_011732303.1;Parent=gene-HGK48_RS06110;Dbxref=GenBank:WP_011732303.1;Name=WP_011732303.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06110;product=hypothetical protein;protein_id=WP_011732303.1;transl_table=11 NZ_JAATTN010000115.1 RefSeq gene 1507 2772 . + . ID=gene-HGK48_RS06115;Name=HGK48_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06115 NZ_JAATTN010000115.1 Protein Homology CDS 1507 2772 . + 0 ID=cds-WP_002850734.1;Parent=gene-HGK48_RS06115;Dbxref=GenBank:WP_002850734.1;Name=WP_002850734.1;Ontology_term=GO:0046685,GO:0015105,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850734.1;locus_tag=HGK48_RS06115;product=arsenic transporter;protein_id=WP_002850734.1;transl_table=11 NZ_JAATTN010000115.1 RefSeq gene 2765 3424 . - . ID=gene-HGK48_RS06120;Name=HGK48_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06120 NZ_JAATTN010000115.1 Protein Homology CDS 2765 3424 . - 0 ID=cds-WP_011732302.1;Parent=gene-HGK48_RS06120;Dbxref=GenBank:WP_011732302.1;Name=WP_011732302.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732302.1;locus_tag=HGK48_RS06120;product=ABC transporter ATP-binding protein;protein_id=WP_011732302.1;transl_table=11 NZ_JAATTN010000115.1 RefSeq gene 3421 4035 . - . ID=gene-HGK48_RS06125;Name=HGK48_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06125 NZ_JAATTN010000115.1 Protein Homology CDS 3421 4035 . - 0 ID=cds-WP_002850733.1;Parent=gene-HGK48_RS06125;Dbxref=GenBank:WP_002850733.1;Name=WP_002850733.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850733.1;locus_tag=HGK48_RS06125;product=ATP-binding cassette domain-containing protein;protein_id=WP_002850733.1;transl_table=11 NZ_JAATTN010000115.1 RefSeq gene 4028 4810 . - . ID=gene-HGK48_RS06130;Name=HGK48_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06130 NZ_JAATTN010000115.1 Protein Homology CDS 4028 4810 . - 0 ID=cds-WP_002850731.1;Parent=gene-HGK48_RS06130;Dbxref=GenBank:WP_002850731.1;Name=WP_002850731.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850731.1;locus_tag=HGK48_RS06130;product=ABC transporter permease;protein_id=WP_002850731.1;transl_table=11 NZ_JAATTN010000115.1 RefSeq gene 4813 5316 . - . ID=gene-HGK48_RS06135;Name=HGK48_RS06135;end_range=5316,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06135;partial=true NZ_JAATTN010000115.1 Protein Homology CDS 4813 5316 . - 0 ID=cds-WP_168236752.1;Parent=gene-HGK48_RS06135;Dbxref=GenBank:WP_168236752.1;Name=WP_168236752.1;Ontology_term=GO:0055085;end_range=5316,.;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850729.1;locus_tag=HGK48_RS06135;partial=true;product=ABC transporter permease;protein_id=WP_168236752.1;transl_table=11 ##sequence-region NZ_JAATTN010000116.1 1 5300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000116.1 RefSeq region 1 5300 . + . ID=NZ_JAATTN010000116.1:1..5300;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000116.1 RefSeq pseudogene 1 190 . - . ID=gene-HGK48_RS06140;Name=HGK48_RS06140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS06140;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000116.1 Protein Homology CDS 1 190 . - 0 ID=cds-HGK48_RS06140;Parent=gene-HGK48_RS06140;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002947229.1;locus_tag=HGK48_RS06140;partial=true;product=DMT family transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000116.1 RefSeq gene 246 764 . - . ID=gene-HGK48_RS06145;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=HGK48_RS06145 NZ_JAATTN010000116.1 Protein Homology CDS 246 764 . - 0 ID=cds-WP_002847820.1;Parent=gene-HGK48_RS06145;Dbxref=GenBank:WP_002847820.1;Name=WP_002847820.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847820.1;locus_tag=HGK48_RS06145;product=thiol peroxidase;protein_id=WP_002847820.1;transl_table=11 NZ_JAATTN010000116.1 RefSeq gene 842 1255 . - . ID=gene-HGK48_RS06150;Name=HGK48_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06150 NZ_JAATTN010000116.1 Protein Homology CDS 842 1255 . - 0 ID=cds-WP_002847822.1;Parent=gene-HGK48_RS06150;Dbxref=GenBank:WP_002847822.1;Name=WP_002847822.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002951404.1;locus_tag=HGK48_RS06150;product=RDD family protein;protein_id=WP_002847822.1;transl_table=11 NZ_JAATTN010000116.1 RefSeq gene 1255 1863 . - . ID=gene-HGK48_RS06155;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=HGK48_RS06155 NZ_JAATTN010000116.1 Protein Homology CDS 1255 1863 . - 0 ID=cds-WP_010400060.1;Parent=gene-HGK48_RS06155;Dbxref=GenBank:WP_010400060.1;Name=WP_010400060.1;Ontology_term=GO:0019856,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343676.1;locus_tag=HGK48_RS06155;product=orotate phosphoribosyltransferase;protein_id=WP_010400060.1;transl_table=11 NZ_JAATTN010000116.1 RefSeq gene 1866 2423 . - . ID=gene-HGK48_RS06160;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=HGK48_RS06160 NZ_JAATTN010000116.1 Protein Homology CDS 1866 2423 . - 0 ID=cds-WP_002847832.1;Parent=gene-HGK48_RS06160;Dbxref=GenBank:WP_002847832.1;Name=WP_002847832.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002854596.1;locus_tag=HGK48_RS06160;product=ribosome recycling factor;protein_id=WP_002847832.1;transl_table=11 NZ_JAATTN010000116.1 RefSeq gene 2413 3330 . - . ID=gene-HGK48_RS06165;Name=HGK48_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06165 NZ_JAATTN010000116.1 Protein Homology CDS 2413 3330 . - 0 ID=cds-WP_002847834.1;Parent=gene-HGK48_RS06165;Dbxref=GenBank:WP_002847834.1;Name=WP_002847834.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847834.1;locus_tag=HGK48_RS06165;product=polysaccharide deacetylase family protein;protein_id=WP_002847834.1;transl_table=11 NZ_JAATTN010000116.1 RefSeq gene 3369 3698 . - . ID=gene-HGK48_RS06170;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=HGK48_RS06170 NZ_JAATTN010000116.1 Protein Homology CDS 3369 3698 . - 0 ID=cds-WP_002847836.1;Parent=gene-HGK48_RS06170;Dbxref=GenBank:WP_002847836.1;Name=WP_002847836.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847836.1;locus_tag=HGK48_RS06170;product=preprotein translocase subunit SecG;protein_id=WP_002847836.1;transl_table=11 NZ_JAATTN010000116.1 RefSeq gene 3798 4478 . - . ID=gene-HGK48_RS06175;Name=HGK48_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06175 NZ_JAATTN010000116.1 Protein Homology CDS 3798 4478 . - 0 ID=cds-WP_002847838.1;Parent=gene-HGK48_RS06175;Dbxref=GenBank:WP_002847838.1;Name=WP_002847838.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847838.1;locus_tag=HGK48_RS06175;product=Bax inhibitor-1/YccA family protein;protein_id=WP_002847838.1;transl_table=11 NZ_JAATTN010000116.1 RefSeq gene 4761 4848 . - . ID=gene-HGK48_RS06180;Name=HGK48_RS06180;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06180 NZ_JAATTN010000116.1 tRNAscan-SE tRNA 4761 4848 . - . ID=rna-HGK48_RS06180;Parent=gene-HGK48_RS06180;anticodon=(pos:complement(4812..4814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06180;product=tRNA-Ser NZ_JAATTN010000116.1 tRNAscan-SE exon 4761 4848 . - . ID=exon-HGK48_RS06180-1;Parent=rna-HGK48_RS06180;anticodon=(pos:complement(4812..4814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06180;product=tRNA-Ser NZ_JAATTN010000116.1 RefSeq gene 4857 5012 . - . ID=gene-HGK48_RS06185;Name=HGK48_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06185 NZ_JAATTN010000116.1 Protein Homology CDS 4857 5012 . - 0 ID=cds-WP_011732343.1;Parent=gene-HGK48_RS06185;Dbxref=GenBank:WP_011732343.1;Name=WP_011732343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732343.1;locus_tag=HGK48_RS06185;product=hypothetical protein;protein_id=WP_011732343.1;transl_table=11 NZ_JAATTN010000116.1 RefSeq gene 5033 5106 . - . ID=gene-HGK48_RS06190;Name=HGK48_RS06190;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06190 NZ_JAATTN010000116.1 tRNAscan-SE tRNA 5033 5106 . - . ID=rna-HGK48_RS06190;Parent=gene-HGK48_RS06190;anticodon=(pos:complement(5072..5074));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06190;product=tRNA-Cys NZ_JAATTN010000116.1 tRNAscan-SE exon 5033 5106 . - . ID=exon-HGK48_RS06190-1;Parent=rna-HGK48_RS06190;anticodon=(pos:complement(5072..5074));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06190;product=tRNA-Cys NZ_JAATTN010000116.1 RefSeq gene 5130 5216 . - . ID=gene-HGK48_RS06195;Name=HGK48_RS06195;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06195 NZ_JAATTN010000116.1 tRNAscan-SE tRNA 5130 5216 . - . ID=rna-HGK48_RS06195;Parent=gene-HGK48_RS06195;anticodon=(pos:complement(5181..5183));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06195;product=tRNA-Leu NZ_JAATTN010000116.1 tRNAscan-SE exon 5130 5216 . - . ID=exon-HGK48_RS06195-1;Parent=rna-HGK48_RS06195;anticodon=(pos:complement(5181..5183));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06195;product=tRNA-Leu ##sequence-region NZ_JAATTN010000117.1 1 5209 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000117.1 RefSeq region 1 5209 . + . ID=NZ_JAATTN010000117.1:1..5209;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000117.1 RefSeq gene 1 1444 . - . ID=gene-HGK48_RS06200;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=HGK48_RS06200;partial=true;start_range=.,1 NZ_JAATTN010000117.1 Protein Homology CDS 1 1444 . - 0 ID=cds-WP_168236753.1;Parent=gene-HGK48_RS06200;Dbxref=GenBank:WP_168236753.1;Name=WP_168236753.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732237.1;locus_tag=HGK48_RS06200;partial=true;product=selenocysteine-specific translation elongation factor;protein_id=WP_168236753.1;start_range=.,1;transl_table=11 NZ_JAATTN010000117.1 RefSeq gene 1437 2765 . - . ID=gene-HGK48_RS06205;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=HGK48_RS06205 NZ_JAATTN010000117.1 Protein Homology CDS 1437 2765 . - 0 ID=cds-WP_002850566.1;Parent=gene-HGK48_RS06205;Dbxref=GenBank:WP_002850566.1;Name=WP_002850566.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850566.1;locus_tag=HGK48_RS06205;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_002850566.1;transl_table=11 NZ_JAATTN010000117.1 RefSeq gene 2897 4558 . + . ID=gene-HGK48_RS06210;Name=HGK48_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06210 NZ_JAATTN010000117.1 Protein Homology CDS 2897 4558 . + 0 ID=cds-WP_002850564.1;Parent=gene-HGK48_RS06210;Dbxref=GenBank:WP_002850564.1;Name=WP_002850564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732236.1;locus_tag=HGK48_RS06210;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_002850564.1;transl_table=11 NZ_JAATTN010000117.1 RefSeq gene 4555 5209 . + . ID=gene-HGK48_RS06215;Name=HGK48_RS06215;end_range=5209,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06215;partial=true NZ_JAATTN010000117.1 Protein Homology CDS 4555 5209 . + 0 ID=cds-WP_168236754.1;Parent=gene-HGK48_RS06215;Dbxref=GenBank:WP_168236754.1;Name=WP_168236754.1;end_range=5209,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850562.1;locus_tag=HGK48_RS06215;partial=true;product=molecular chaperone TorD family protein;protein_id=WP_168236754.1;transl_table=11 ##sequence-region NZ_JAATTN010000118.1 1 5285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000118.1 RefSeq region 1 5285 . + . ID=NZ_JAATTN010000118.1:1..5285;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000118.1 RefSeq gene 233 475 . - . ID=gene-HGK48_RS06225;Name=HGK48_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06225 NZ_JAATTN010000118.1 GeneMarkS-2+ CDS 233 475 . - 0 ID=cds-WP_002850252.1;Parent=gene-HGK48_RS06225;Dbxref=GenBank:WP_002850252.1;Name=WP_002850252.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06225;product=hypothetical protein;protein_id=WP_002850252.1;transl_table=11 NZ_JAATTN010000118.1 RefSeq gene 486 1304 . - . ID=gene-HGK48_RS06230;Name=HGK48_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06230 NZ_JAATTN010000118.1 Protein Homology CDS 486 1304 . - 0 ID=cds-WP_011732187.1;Parent=gene-HGK48_RS06230;Dbxref=GenBank:WP_011732187.1;Name=WP_011732187.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910,GO:0005524;gbkey=CDS;go_function=DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732187.1;locus_tag=HGK48_RS06230;product=DNA ligase;protein_id=WP_011732187.1;transl_table=11 NZ_JAATTN010000118.1 RefSeq gene 1301 2359 . - . ID=gene-HGK48_RS06235;Name=HGK48_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06235 NZ_JAATTN010000118.1 Protein Homology CDS 1301 2359 . - 0 ID=cds-WP_002850256.1;Parent=gene-HGK48_RS06235;Dbxref=GenBank:WP_002850256.1;Name=WP_002850256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009492828.1;locus_tag=HGK48_RS06235;product=NAD-dependent epimerase;protein_id=WP_002850256.1;transl_table=11 NZ_JAATTN010000118.1 RefSeq gene 2369 3586 . - . ID=gene-HGK48_RS06240;Name=HGK48_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06240 NZ_JAATTN010000118.1 Protein Homology CDS 2369 3586 . - 0 ID=cds-WP_011732189.1;Parent=gene-HGK48_RS06240;Dbxref=GenBank:WP_011732189.1;Name=WP_011732189.1;Ontology_term=GO:0016628,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732189.1;locus_tag=HGK48_RS06240;product=nucleotide sugar dehydrogenase;protein_id=WP_011732189.1;transl_table=11 NZ_JAATTN010000118.1 RefSeq gene 3628 4446 . - . ID=gene-HGK48_RS06245;Name=HGK48_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06245 NZ_JAATTN010000118.1 Protein Homology CDS 3628 4446 . - 0 ID=cds-WP_011732190.1;Parent=gene-HGK48_RS06245;Dbxref=GenBank:WP_011732190.1;Name=WP_011732190.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732190.1;locus_tag=HGK48_RS06245;product=3'-5' exonuclease;protein_id=WP_011732190.1;transl_table=11 NZ_JAATTN010000118.1 RefSeq gene 4506 5285 . + . ID=gene-HGK48_RS06250;Name=waaC;end_range=5285,.;gbkey=Gene;gene=waaC;gene_biotype=protein_coding;locus_tag=HGK48_RS06250;partial=true NZ_JAATTN010000118.1 Protein Homology CDS 4506 5285 . + 0 ID=cds-WP_168236756.1;Parent=gene-HGK48_RS06250;Dbxref=GenBank:WP_168236756.1;Name=WP_168236756.1;Ontology_term=GO:0009244,GO:0008920;end_range=5285,.;gbkey=CDS;gene=waaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732191.1;locus_tag=HGK48_RS06250;partial=true;product=lipopolysaccharide heptosyltransferase I;protein_id=WP_168236756.1;transl_table=11 ##sequence-region NZ_JAATTN010000119.1 1 5269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000119.1 RefSeq region 1 5269 . + . ID=NZ_JAATTN010000119.1:1..5269;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000119.1 RefSeq gene 1 1917 . + . ID=gene-HGK48_RS06255;Name=HGK48_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06255;partial=true;start_range=.,1 NZ_JAATTN010000119.1 Protein Homology CDS 1 1917 . + 0 ID=cds-WP_168236757.1;Parent=gene-HGK48_RS06255;Dbxref=GenBank:WP_168236757.1;Name=WP_168236757.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: protein motif:HMM:NF013311.6;locus_tag=HGK48_RS06255;partial=true;product=DNA topoisomerase;protein_id=WP_168236757.1;start_range=.,1;transl_table=11 NZ_JAATTN010000119.1 RefSeq gene 1945 2385 . + . ID=gene-HGK48_RS06260;Name=HGK48_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06260 NZ_JAATTN010000119.1 GeneMarkS-2+ CDS 1945 2385 . + 0 ID=cds-WP_035170844.1;Parent=gene-HGK48_RS06260;Dbxref=GenBank:WP_035170844.1;Name=WP_035170844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06260;product=hypothetical protein;protein_id=WP_035170844.1;transl_table=11 NZ_JAATTN010000119.1 RefSeq gene 2372 2641 . + . ID=gene-HGK48_RS06265;Name=HGK48_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06265 NZ_JAATTN010000119.1 Protein Homology CDS 2372 2641 . + 0 ID=cds-WP_051936689.1;Parent=gene-HGK48_RS06265;Dbxref=GenBank:WP_051936689.1;Name=WP_051936689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013618.6;locus_tag=HGK48_RS06265;product=transglycosylase SLT domain-containing protein;protein_id=WP_051936689.1;transl_table=11 NZ_JAATTN010000119.1 RefSeq gene 2598 3566 . + . ID=gene-HGK48_RS06270;Name=HGK48_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06270 NZ_JAATTN010000119.1 Protein Homology CDS 2598 3566 . + 0 ID=cds-WP_168236758.1;Parent=gene-HGK48_RS06270;Dbxref=GenBank:WP_168236758.1;Name=WP_168236758.1;Ontology_term=GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;inference=COORDINATES: protein motif:HMM:NF024554.6;locus_tag=HGK48_RS06270;product=toprim domain-containing protein;protein_id=WP_168236758.1;transl_table=11 NZ_JAATTN010000119.1 RefSeq gene 3674 4048 . + . ID=gene-HGK48_RS06275;Name=HGK48_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06275 NZ_JAATTN010000119.1 GeneMarkS-2+ CDS 3674 4048 . + 0 ID=cds-WP_051936688.1;Parent=gene-HGK48_RS06275;Dbxref=GenBank:WP_051936688.1;Name=WP_051936688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06275;product=hypothetical protein;protein_id=WP_051936688.1;transl_table=11 NZ_JAATTN010000119.1 RefSeq gene 4122 5269 . - . ID=gene-HGK48_RS06280;Name=HGK48_RS06280;end_range=5269,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06280;partial=true NZ_JAATTN010000119.1 GeneMarkS-2+ CDS 4122 5269 . - 2 ID=cds-WP_206120302.1;Parent=gene-HGK48_RS06280;Dbxref=GenBank:WP_206120302.1;Name=WP_206120302.1;end_range=5269,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06280;partial=true;product=hypothetical protein;protein_id=WP_206120302.1;transl_table=11 ##sequence-region NZ_JAATTN010000011.1 1 16693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000011.1 RefSeq region 1 16693 . + . ID=NZ_JAATTN010000011.1:1..16693;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000011.1 RefSeq gene 1 1386 . + . ID=gene-HGK48_RS01240;Name=HGK48_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01240;partial=true;start_range=.,1 NZ_JAATTN010000011.1 Protein Homology CDS 1 1386 . + 0 ID=cds-WP_168236639.1;Parent=gene-HGK48_RS01240;Dbxref=GenBank:WP_168236639.1;Name=WP_168236639.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850838.1;locus_tag=HGK48_RS01240;partial=true;product=mechanosensitive ion channel family protein;protein_id=WP_168236639.1;start_range=.,1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 1379 1552 . + . ID=gene-HGK48_RS01245;Name=HGK48_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01245 NZ_JAATTN010000011.1 Protein Homology CDS 1379 1552 . + 0 ID=cds-WP_002850853.1;Parent=gene-HGK48_RS01245;Dbxref=GenBank:WP_002850853.1;Name=WP_002850853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850853.1;locus_tag=HGK48_RS01245;product=hypothetical protein;protein_id=WP_002850853.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 1552 2928 . + . ID=gene-HGK48_RS01250;Name=HGK48_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01250 NZ_JAATTN010000011.1 GeneMarkS-2+ CDS 1552 2928 . + 0 ID=cds-WP_168236638.1;Parent=gene-HGK48_RS01250;Dbxref=GenBank:WP_168236638.1;Name=WP_168236638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01250;product=hypothetical protein;protein_id=WP_168236638.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 2957 4027 . - . ID=gene-HGK48_RS01255;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=HGK48_RS01255 NZ_JAATTN010000011.1 Protein Homology CDS 2957 4027 . - 0 ID=cds-WP_002850860.1;Parent=gene-HGK48_RS01255;Dbxref=GenBank:WP_002850860.1;Name=WP_002850860.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850860.1;locus_tag=HGK48_RS01255;product=chorismate synthase;protein_id=WP_002850860.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 4024 4695 . - . ID=gene-HGK48_RS01260;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=HGK48_RS01260 NZ_JAATTN010000011.1 Protein Homology CDS 4024 4695 . - 0 ID=cds-WP_010400315.1;Parent=gene-HGK48_RS01260;Dbxref=GenBank:WP_010400315.1;Name=WP_010400315.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010400315.1;locus_tag=HGK48_RS01260;product=ribonuclease III;protein_id=WP_010400315.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 4688 5113 . - . ID=gene-HGK48_RS01265;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=HGK48_RS01265 NZ_JAATTN010000011.1 Protein Homology CDS 4688 5113 . - 0 ID=cds-WP_002850862.1;Parent=gene-HGK48_RS01265;Dbxref=GenBank:WP_002850862.1;Name=WP_002850862.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850862.1;locus_tag=HGK48_RS01265;product=ribonuclease HI;protein_id=WP_002850862.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 5091 6101 . - . ID=gene-HGK48_RS01270;Name=HGK48_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01270 NZ_JAATTN010000011.1 Protein Homology CDS 5091 6101 . - 0 ID=cds-WP_002850864.1;Parent=gene-HGK48_RS01270;Dbxref=GenBank:WP_002850864.1;Name=WP_002850864.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018137228.1;locus_tag=HGK48_RS01270;product=tetratricopeptide repeat protein;protein_id=WP_002850864.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 6163 7803 . + . ID=gene-HGK48_RS01275;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=HGK48_RS01275 NZ_JAATTN010000011.1 Protein Homology CDS 6163 7803 . + 0 ID=cds-WP_002850865.1;Parent=gene-HGK48_RS01275;Dbxref=GenBank:WP_002850865.1;Name=WP_002850865.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850865.1;locus_tag=HGK48_RS01275;product=DNA primase;protein_id=WP_002850865.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 7800 8789 . + . ID=gene-HGK48_RS01280;Name=HGK48_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01280 NZ_JAATTN010000011.1 Protein Homology CDS 7800 8789 . + 0 ID=cds-WP_002850867.1;Parent=gene-HGK48_RS01280;Dbxref=GenBank:WP_002850867.1;Name=WP_002850867.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850867.1;locus_tag=HGK48_RS01280;product=argininosuccinate synthase domain-containing protein;protein_id=WP_002850867.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 8803 9690 . + . ID=gene-HGK48_RS01285;Name=HGK48_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01285 NZ_JAATTN010000011.1 Protein Homology CDS 8803 9690 . + 0 ID=cds-WP_002850868.1;Parent=gene-HGK48_RS01285;Dbxref=GenBank:WP_002850868.1;Name=WP_002850868.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF024584.6;locus_tag=HGK48_RS01285;product=radical SAM/SPASM domain-containing protein;protein_id=WP_002850868.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 9745 10443 . + . ID=gene-HGK48_RS01290;Name=HGK48_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01290 NZ_JAATTN010000011.1 Protein Homology CDS 9745 10443 . + 0 ID=cds-WP_002850869.1;Parent=gene-HGK48_RS01290;Dbxref=GenBank:WP_002850869.1;Name=WP_002850869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850869.1;locus_tag=HGK48_RS01290;product=SIMPL domain-containing protein;protein_id=WP_002850869.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 10835 12142 . - . ID=gene-HGK48_RS01295;Name=HGK48_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01295 NZ_JAATTN010000011.1 Protein Homology CDS 10835 12142 . - 0 ID=cds-WP_002850871.1;Parent=gene-HGK48_RS01295;Dbxref=GenBank:WP_002850871.1;Name=WP_002850871.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850871.1;locus_tag=HGK48_RS01295;product=Na+/H+ antiporter family protein;protein_id=WP_002850871.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 12227 13273 . - . ID=gene-HGK48_RS01300;Name=HGK48_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01300 NZ_JAATTN010000011.1 GeneMarkS-2+ CDS 12227 13273 . - 0 ID=cds-WP_002850872.1;Parent=gene-HGK48_RS01300;Dbxref=GenBank:WP_002850872.1;Name=WP_002850872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01300;product=hypothetical protein;protein_id=WP_002850872.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 13282 14727 . - . ID=gene-HGK48_RS01305;Name=HGK48_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01305 NZ_JAATTN010000011.1 Protein Homology CDS 13282 14727 . - 0 ID=cds-WP_002850873.1;Parent=gene-HGK48_RS01305;Dbxref=GenBank:WP_002850873.1;Name=WP_002850873.1;Ontology_term=GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850873.1;locus_tag=HGK48_RS01305;product=MBOAT family O-acyltransferase;protein_id=WP_002850873.1;transl_table=11 NZ_JAATTN010000011.1 RefSeq gene 14864 16537 . + . ID=gene-HGK48_RS01310;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=HGK48_RS01310 NZ_JAATTN010000011.1 Protein Homology CDS 14864 16537 . + 0 ID=cds-WP_002850874.1;Parent=gene-HGK48_RS01310;Dbxref=GenBank:WP_002850874.1;Name=WP_002850874.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850874.1;locus_tag=HGK48_RS01310;product=dihydroxy-acid dehydratase;protein_id=WP_002850874.1;transl_table=11 ##sequence-region NZ_JAATTN010000120.1 1 5263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000120.1 RefSeq region 1 5263 . + . ID=NZ_JAATTN010000120.1:1..5263;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000120.1 RefSeq gene 1 2141 . + . ID=gene-HGK48_RS06285;Name=HGK48_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06285;partial=true;start_range=.,1 NZ_JAATTN010000120.1 Protein Homology CDS 1 2141 . + 2 ID=cds-WP_168236760.1;Parent=gene-HGK48_RS06285;Dbxref=GenBank:WP_168236760.1;Name=WP_168236760.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017197.7;locus_tag=HGK48_RS06285;partial=true;product=DUF748 domain-containing protein;protein_id=WP_168236760.1;start_range=.,1;transl_table=11 NZ_JAATTN010000120.1 RefSeq gene 2218 2778 . - . ID=gene-HGK48_RS06290;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=HGK48_RS06290 NZ_JAATTN010000120.1 Protein Homology CDS 2218 2778 . - 0 ID=cds-WP_002848432.1;Parent=gene-HGK48_RS06290;Dbxref=GenBank:WP_002848432.1;Name=WP_002848432.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848432.1;locus_tag=HGK48_RS06290;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_002848432.1;transl_table=11 NZ_JAATTN010000120.1 RefSeq gene 2779 2979 . - . ID=gene-HGK48_RS06295;Name=HGK48_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06295 NZ_JAATTN010000120.1 Protein Homology CDS 2779 2979 . - 0 ID=cds-WP_002848431.1;Parent=gene-HGK48_RS06295;Dbxref=GenBank:WP_002848431.1;Name=WP_002848431.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013522.6;locus_tag=HGK48_RS06295;product=tautomerase family protein;protein_id=WP_002848431.1;transl_table=11 NZ_JAATTN010000120.1 RefSeq gene 3119 3625 . - . ID=gene-HGK48_RS06300;Name=HGK48_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06300 NZ_JAATTN010000120.1 GeneMarkS-2+ CDS 3119 3625 . - 0 ID=cds-WP_002848430.1;Parent=gene-HGK48_RS06300;Dbxref=GenBank:WP_002848430.1;Name=WP_002848430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06300;product=hypothetical protein;protein_id=WP_002848430.1;transl_table=11 NZ_JAATTN010000120.1 RefSeq gene 3627 3854 . - . ID=gene-HGK48_RS06305;Name=HGK48_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06305 NZ_JAATTN010000120.1 GeneMarkS-2+ CDS 3627 3854 . - 0 ID=cds-WP_002848429.1;Parent=gene-HGK48_RS06305;Dbxref=GenBank:WP_002848429.1;Name=WP_002848429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06305;product=hypothetical protein;protein_id=WP_002848429.1;transl_table=11 NZ_JAATTN010000120.1 RefSeq gene 3856 4254 . - . ID=gene-HGK48_RS06310;Name=HGK48_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06310 NZ_JAATTN010000120.1 GeneMarkS-2+ CDS 3856 4254 . - 0 ID=cds-WP_002848428.1;Parent=gene-HGK48_RS06310;Dbxref=GenBank:WP_002848428.1;Name=WP_002848428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06310;product=hypothetical protein;protein_id=WP_002848428.1;transl_table=11 NZ_JAATTN010000120.1 RefSeq gene 4262 4519 . - . ID=gene-HGK48_RS06315;Name=HGK48_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06315 NZ_JAATTN010000120.1 Protein Homology CDS 4262 4519 . - 0 ID=cds-WP_002848427.1;Parent=gene-HGK48_RS06315;Dbxref=GenBank:WP_002848427.1;Name=WP_002848427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848427.1;locus_tag=HGK48_RS06315;product=hypothetical protein;protein_id=WP_002848427.1;transl_table=11 NZ_JAATTN010000120.1 RefSeq gene 4609 4869 . + . ID=gene-HGK48_RS06320;Name=HGK48_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06320 NZ_JAATTN010000120.1 Protein Homology CDS 4609 4869 . + 0 ID=cds-WP_002848421.1;Parent=gene-HGK48_RS06320;Dbxref=GenBank:WP_002848421.1;Name=WP_002848421.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848421.1;locus_tag=HGK48_RS06320;product=helix-turn-helix domain-containing protein;protein_id=WP_002848421.1;transl_table=11 NZ_JAATTN010000120.1 RefSeq gene 4952 5263 . + . ID=gene-HGK48_RS06325;Name=HGK48_RS06325;end_range=5263,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06325;partial=true NZ_JAATTN010000120.1 Protein Homology CDS 4952 5263 . + 0 ID=cds-WP_206120303.1;Parent=gene-HGK48_RS06325;Dbxref=GenBank:WP_206120303.1;Name=WP_206120303.1;Ontology_term=GO:0003824;end_range=5263,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848414.1;locus_tag=HGK48_RS06325;partial=true;product=aminotransferase class IV;protein_id=WP_206120303.1;transl_table=11 ##sequence-region NZ_JAATTN010000121.1 1 5223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000121.1 RefSeq region 1 5223 . + . ID=NZ_JAATTN010000121.1:1..5223;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000121.1 RefSeq gene 118 193 . + . ID=gene-HGK48_RS06330;Name=HGK48_RS06330;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06330 NZ_JAATTN010000121.1 tRNAscan-SE tRNA 118 193 . + . ID=rna-HGK48_RS06330;Parent=gene-HGK48_RS06330;anticodon=(pos:151..153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06330;product=tRNA-Thr NZ_JAATTN010000121.1 tRNAscan-SE exon 118 193 . + . ID=exon-HGK48_RS06330-1;Parent=rna-HGK48_RS06330;anticodon=(pos:151..153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06330;product=tRNA-Thr NZ_JAATTN010000121.1 RefSeq gene 250 334 . + . ID=gene-HGK48_RS06335;Name=HGK48_RS06335;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06335 NZ_JAATTN010000121.1 tRNAscan-SE tRNA 250 334 . + . ID=rna-HGK48_RS06335;Parent=gene-HGK48_RS06335;anticodon=(pos:284..286);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06335;product=tRNA-Tyr NZ_JAATTN010000121.1 tRNAscan-SE exon 250 334 . + . ID=exon-HGK48_RS06335-1;Parent=rna-HGK48_RS06335;anticodon=(pos:284..286);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06335;product=tRNA-Tyr NZ_JAATTN010000121.1 RefSeq gene 343 419 . + . ID=gene-HGK48_RS06340;Name=HGK48_RS06340;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06340 NZ_JAATTN010000121.1 tRNAscan-SE tRNA 343 419 . + . ID=rna-HGK48_RS06340;Parent=gene-HGK48_RS06340;anticodon=(pos:377..379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06340;product=tRNA-Gly NZ_JAATTN010000121.1 tRNAscan-SE exon 343 419 . + . ID=exon-HGK48_RS06340-1;Parent=rna-HGK48_RS06340;anticodon=(pos:377..379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06340;product=tRNA-Gly NZ_JAATTN010000121.1 RefSeq gene 558 632 . + . ID=gene-HGK48_RS06345;Name=HGK48_RS06345;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06345 NZ_JAATTN010000121.1 tRNAscan-SE tRNA 558 632 . + . ID=rna-HGK48_RS06345;Parent=gene-HGK48_RS06345;anticodon=(pos:590..592);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06345;product=tRNA-Thr NZ_JAATTN010000121.1 tRNAscan-SE exon 558 632 . + . ID=exon-HGK48_RS06345-1;Parent=rna-HGK48_RS06345;anticodon=(pos:590..592);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06345;product=tRNA-Thr NZ_JAATTN010000121.1 RefSeq gene 708 1907 . + . ID=gene-HGK48_RS06350;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=HGK48_RS06350 NZ_JAATTN010000121.1 Protein Homology CDS 708 1907 . + 0 ID=cds-WP_002850129.1;Parent=gene-HGK48_RS06350;Dbxref=GenBank:WP_002850129.1;Name=WP_002850129.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850129.1;locus_tag=HGK48_RS06350;product=elongation factor Tu;protein_id=WP_002850129.1;transl_table=11 NZ_JAATTN010000121.1 RefSeq gene 1955 2122 . + . ID=gene-HGK48_RS06355;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=HGK48_RS06355 NZ_JAATTN010000121.1 Protein Homology CDS 1955 2122 . + 0 ID=cds-WP_010401324.1;Parent=gene-HGK48_RS06355;Dbxref=GenBank:WP_010401324.1;Name=WP_010401324.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010401324.1;locus_tag=HGK48_RS06355;product=50S ribosomal protein L33;protein_id=WP_010401324.1;transl_table=11 NZ_JAATTN010000121.1 RefSeq gene 2149 2224 . + . ID=gene-HGK48_RS06360;Name=HGK48_RS06360;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS06360 NZ_JAATTN010000121.1 tRNAscan-SE tRNA 2149 2224 . + . ID=rna-HGK48_RS06360;Parent=gene-HGK48_RS06360;anticodon=(pos:2182..2184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06360;product=tRNA-Trp NZ_JAATTN010000121.1 tRNAscan-SE exon 2149 2224 . + . ID=exon-HGK48_RS06360-1;Parent=rna-HGK48_RS06360;anticodon=(pos:2182..2184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS06360;product=tRNA-Trp NZ_JAATTN010000121.1 RefSeq gene 2238 2417 . + . ID=gene-HGK48_RS06365;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=HGK48_RS06365 NZ_JAATTN010000121.1 Protein Homology CDS 2238 2417 . + 0 ID=cds-WP_002850125.1;Parent=gene-HGK48_RS06365;Dbxref=GenBank:WP_002850125.1;Name=WP_002850125.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850125.1;locus_tag=HGK48_RS06365;product=preprotein translocase subunit SecE;protein_id=WP_002850125.1;transl_table=11 NZ_JAATTN010000121.1 RefSeq gene 2427 2957 . + . ID=gene-HGK48_RS06370;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=HGK48_RS06370 NZ_JAATTN010000121.1 Protein Homology CDS 2427 2957 . + 0 ID=cds-WP_002850123.1;Parent=gene-HGK48_RS06370;Dbxref=GenBank:WP_002850123.1;Name=WP_002850123.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004322123.1;locus_tag=HGK48_RS06370;product=transcription termination/antitermination protein NusG;protein_id=WP_002850123.1;transl_table=11 NZ_JAATTN010000121.1 RefSeq gene 2975 3400 . + . ID=gene-HGK48_RS06375;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=HGK48_RS06375 NZ_JAATTN010000121.1 Protein Homology CDS 2975 3400 . + 0 ID=cds-WP_002850121.1;Parent=gene-HGK48_RS06375;Dbxref=GenBank:WP_002850121.1;Name=WP_002850121.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343908.1;locus_tag=HGK48_RS06375;product=50S ribosomal protein L11;protein_id=WP_002850121.1;transl_table=11 NZ_JAATTN010000121.1 RefSeq gene 3460 4164 . + . ID=gene-HGK48_RS06380;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=HGK48_RS06380 NZ_JAATTN010000121.1 Protein Homology CDS 3460 4164 . + 0 ID=cds-WP_002850119.1;Parent=gene-HGK48_RS06380;Dbxref=GenBank:WP_002850119.1;Name=WP_002850119.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850119.1;locus_tag=HGK48_RS06380;product=50S ribosomal protein L1;protein_id=WP_002850119.1;transl_table=11 NZ_JAATTN010000121.1 RefSeq gene 4270 4755 . + . ID=gene-HGK48_RS06385;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=HGK48_RS06385 NZ_JAATTN010000121.1 Protein Homology CDS 4270 4755 . + 0 ID=cds-WP_002850117.1;Parent=gene-HGK48_RS06385;Dbxref=GenBank:WP_002850117.1;Name=WP_002850117.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850117.1;locus_tag=HGK48_RS06385;product=50S ribosomal protein L10;protein_id=WP_002850117.1;transl_table=11 NZ_JAATTN010000121.1 RefSeq gene 4788 5162 . + . ID=gene-HGK48_RS06390;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=HGK48_RS06390 NZ_JAATTN010000121.1 Protein Homology CDS 4788 5162 . + 0 ID=cds-WP_002850115.1;Parent=gene-HGK48_RS06390;Dbxref=GenBank:WP_002850115.1;Name=WP_002850115.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002858569.1;locus_tag=HGK48_RS06390;product=50S ribosomal protein L7/L12;protein_id=WP_002850115.1;transl_table=11 ##sequence-region NZ_JAATTN010000122.1 1 5192 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000122.1 RefSeq region 1 5192 . + . ID=NZ_JAATTN010000122.1:1..5192;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000122.1 RefSeq gene 1 2096 . - . ID=gene-HGK48_RS06395;Name=HGK48_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06395;partial=true;start_range=.,1 NZ_JAATTN010000122.1 Protein Homology CDS 1 2096 . - 0 ID=cds-WP_206120304.1;Parent=gene-HGK48_RS06395;Dbxref=GenBank:WP_206120304.1;Name=WP_206120304.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019974.6;locus_tag=HGK48_RS06395;partial=true;product=HAMP domain-containing histidine kinase;protein_id=WP_206120304.1;start_range=.,1;transl_table=11 NZ_JAATTN010000122.1 RefSeq gene 2093 2845 . - . ID=gene-HGK48_RS06400;Name=HGK48_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06400 NZ_JAATTN010000122.1 GeneMarkS-2+ CDS 2093 2845 . - 0 ID=cds-WP_167497341.1;Parent=gene-HGK48_RS06400;Dbxref=GenBank:WP_167497341.1;Name=WP_167497341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06400;product=hypothetical protein;protein_id=WP_167497341.1;transl_table=11 NZ_JAATTN010000122.1 RefSeq gene 2908 4716 . - . ID=gene-HGK48_RS06405;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=HGK48_RS06405 NZ_JAATTN010000122.1 Protein Homology CDS 2908 4716 . - 0 ID=cds-WP_011732141.1;Parent=gene-HGK48_RS06405;Dbxref=GenBank:WP_011732141.1;Name=WP_011732141.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732141.1;locus_tag=HGK48_RS06405;product=excinuclease ABC subunit UvrC;protein_id=WP_011732141.1;transl_table=11 NZ_JAATTN010000122.1 RefSeq gene 4703 5143 . - . ID=gene-HGK48_RS06410;Name=HGK48_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06410 NZ_JAATTN010000122.1 GeneMarkS-2+ CDS 4703 5143 . - 0 ID=cds-WP_002850056.1;Parent=gene-HGK48_RS06410;Dbxref=GenBank:WP_002850056.1;Name=WP_002850056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06410;product=hypothetical protein;protein_id=WP_002850056.1;transl_table=11 ##sequence-region NZ_JAATTN010000123.1 1 5091 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000123.1 RefSeq region 1 5091 . + . ID=NZ_JAATTN010000123.1:1..5091;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000123.1 RefSeq gene 1 172 . + . ID=gene-HGK48_RS06415;Name=fliW;gbkey=Gene;gene=fliW;gene_biotype=protein_coding;locus_tag=HGK48_RS06415;partial=true;start_range=.,1 NZ_JAATTN010000123.1 Protein Homology CDS 1 172 . + 1 ID=cds-WP_168236761.1;Parent=gene-HGK48_RS06415;Dbxref=GenBank:WP_168236761.1;Name=WP_168236761.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliW;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849638.1;locus_tag=HGK48_RS06415;partial=true;product=flagellar assembly protein FliW;protein_id=WP_168236761.1;start_range=.,1;transl_table=11 NZ_JAATTN010000123.1 RefSeq gene 200 874 . + . ID=gene-HGK48_RS06420;Name=HGK48_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06420 NZ_JAATTN010000123.1 GeneMarkS-2+ CDS 200 874 . + 0 ID=cds-WP_002849640.1;Parent=gene-HGK48_RS06420;Dbxref=GenBank:WP_002849640.1;Name=WP_002849640.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06420;product=type II secretion system protein;protein_id=WP_002849640.1;transl_table=11 NZ_JAATTN010000123.1 RefSeq gene 874 1800 . + . ID=gene-HGK48_RS06425;Name=HGK48_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06425 NZ_JAATTN010000123.1 Protein Homology CDS 874 1800 . + 0 ID=cds-WP_002849642.1;Parent=gene-HGK48_RS06425;Dbxref=GenBank:WP_002849642.1;Name=WP_002849642.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=HGK48_RS06425;product=type II secretion system protein;protein_id=WP_002849642.1;transl_table=11 NZ_JAATTN010000123.1 RefSeq gene 2323 2853 . + . ID=gene-HGK48_RS06430;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=HGK48_RS06430 NZ_JAATTN010000123.1 Protein Homology CDS 2323 2853 . + 0 ID=cds-WP_002849646.1;Parent=gene-HGK48_RS06430;Dbxref=GenBank:WP_002849646.1;Name=WP_002849646.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946391.1;locus_tag=HGK48_RS06430;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_002849646.1;transl_table=11 NZ_JAATTN010000123.1 RefSeq gene 3030 4181 . - . ID=gene-HGK48_RS06435;Name=HGK48_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06435 NZ_JAATTN010000123.1 Protein Homology CDS 3030 4181 . - 0 ID=cds-WP_002849648.1;Parent=gene-HGK48_RS06435;Dbxref=GenBank:WP_002849648.1;Name=WP_002849648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849648.1;locus_tag=HGK48_RS06435;product=M28 family peptidase;protein_id=WP_002849648.1;transl_table=11 NZ_JAATTN010000123.1 RefSeq gene 4245 4427 . + . ID=gene-HGK48_RS06440;Name=HGK48_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06440 NZ_JAATTN010000123.1 Protein Homology CDS 4245 4427 . + 0 ID=cds-WP_010400361.1;Parent=gene-HGK48_RS06440;Dbxref=GenBank:WP_010400361.1;Name=WP_010400361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010400361.1;locus_tag=HGK48_RS06440;product=hypothetical protein;protein_id=WP_010400361.1;transl_table=11 NZ_JAATTN010000123.1 RefSeq gene 4411 5091 . + . ID=gene-HGK48_RS06445;Name=cmoB;end_range=5091,.;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=HGK48_RS06445;partial=true NZ_JAATTN010000123.1 Protein Homology CDS 4411 5091 . + 0 ID=cds-WP_168236762.1;Parent=gene-HGK48_RS06445;Dbxref=GenBank:WP_168236762.1;Name=WP_168236762.1;Ontology_term=GO:0002098,GO:0016765;end_range=5091,.;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732070.1;locus_tag=HGK48_RS06445;partial=true;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_168236762.1;transl_table=11 ##sequence-region NZ_JAATTN010000124.1 1 5143 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000124.1 RefSeq region 1 5143 . + . ID=NZ_JAATTN010000124.1:1..5143;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000124.1 RefSeq gene 112 264 . + . ID=gene-HGK48_RS06450;Name=HGK48_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06450 NZ_JAATTN010000124.1 Protein Homology CDS 112 264 . + 0 ID=cds-WP_002849230.1;Parent=gene-HGK48_RS06450;Dbxref=GenBank:WP_002849230.1;Name=WP_002849230.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033894.1;locus_tag=HGK48_RS06450;product=EexN family lipoprotein;protein_id=WP_002849230.1;transl_table=11 NZ_JAATTN010000124.1 RefSeq gene 980 1531 . + . ID=gene-HGK48_RS06455;Name=HGK48_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06455 NZ_JAATTN010000124.1 Protein Homology CDS 980 1531 . + 0 ID=cds-WP_002849232.1;Parent=gene-HGK48_RS06455;Dbxref=GenBank:WP_002849232.1;Name=WP_002849232.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849232.1;locus_tag=HGK48_RS06455;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_002849232.1;transl_table=11 NZ_JAATTN010000124.1 RefSeq gene 1533 2375 . + . ID=gene-HGK48_RS06460;Name=HGK48_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06460 NZ_JAATTN010000124.1 Protein Homology CDS 1533 2375 . + 0 ID=cds-WP_002849235.1;Parent=gene-HGK48_RS06460;Dbxref=GenBank:WP_002849235.1;Name=WP_002849235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849235.1;locus_tag=HGK48_RS06460;product=class 1 fructose-bisphosphatase;protein_id=WP_002849235.1;transl_table=11 NZ_JAATTN010000124.1 RefSeq gene 2368 2697 . + . ID=gene-HGK48_RS11085;Name=HGK48_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11085 NZ_JAATTN010000124.1 GeneMarkS-2+ CDS 2368 2697 . + 0 ID=cds-WP_034959638.1;Parent=gene-HGK48_RS11085;Dbxref=GenBank:WP_034959638.1;Name=WP_034959638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11085;product=hypothetical protein;protein_id=WP_034959638.1;transl_table=11 NZ_JAATTN010000124.1 RefSeq gene 2716 4614 . + . ID=gene-HGK48_RS06470;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=HGK48_RS06470 NZ_JAATTN010000124.1 Protein Homology CDS 2716 4614 . + 0 ID=cds-WP_002849239.1;Parent=gene-HGK48_RS06470;Dbxref=GenBank:WP_002849239.1;Name=WP_002849239.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849239.1;locus_tag=HGK48_RS06470;product=methionine--tRNA ligase;protein_id=WP_002849239.1;transl_table=11 NZ_JAATTN010000124.1 RefSeq pseudogene 4614 5143 . + . ID=gene-HGK48_RS06475;Name=HGK48_RS06475;end_range=5143,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS06475;partial=true;pseudo=true NZ_JAATTN010000124.1 GeneMarkS-2+ CDS 4614 5143 . + 0 ID=cds-HGK48_RS06475;Parent=gene-HGK48_RS06475;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5143,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06475;partial=true;product=ferrochelatase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000125.1 1 5127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000125.1 RefSeq region 1 5127 . + . ID=NZ_JAATTN010000125.1:1..5127;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000125.1 RefSeq gene 1 464 . - . ID=gene-HGK48_RS06480;Name=HGK48_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06480;partial=true;start_range=.,1 NZ_JAATTN010000125.1 Protein Homology CDS 1 464 . - 0 ID=cds-WP_168236763.1;Parent=gene-HGK48_RS06480;Dbxref=GenBank:WP_168236763.1;Name=WP_168236763.1;Ontology_term=GO:0030163,GO:0008914;gbkey=CDS;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849121.1;locus_tag=HGK48_RS06480;partial=true;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_168236763.1;start_range=.,1;transl_table=11 NZ_JAATTN010000125.1 RefSeq gene 461 1315 . - . ID=gene-HGK48_RS06485;Name=HGK48_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06485 NZ_JAATTN010000125.1 Protein Homology CDS 461 1315 . - 0 ID=cds-WP_011731923.1;Parent=gene-HGK48_RS06485;Dbxref=GenBank:WP_011731923.1;Name=WP_011731923.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023166.6;locus_tag=HGK48_RS06485;product=RsiV family protein;protein_id=WP_011731923.1;transl_table=11 NZ_JAATTN010000125.1 RefSeq gene 1312 3510 . - . ID=gene-HGK48_RS06490;Name=HGK48_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06490 NZ_JAATTN010000125.1 Protein Homology CDS 1312 3510 . - 0 ID=cds-WP_002849123.1;Parent=gene-HGK48_RS06490;Dbxref=GenBank:WP_002849123.1;Name=WP_002849123.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849123.1;locus_tag=HGK48_RS06490;product=AAA family ATPase;protein_id=WP_002849123.1;transl_table=11 NZ_JAATTN010000125.1 RefSeq gene 3510 3809 . - . ID=gene-HGK48_RS06495;Name=HGK48_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06495 NZ_JAATTN010000125.1 Protein Homology CDS 3510 3809 . - 0 ID=cds-WP_011731924.1;Parent=gene-HGK48_RS06495;Dbxref=GenBank:WP_011731924.1;Name=WP_011731924.1;Ontology_term=GO:0006508,GO:0030163;gbkey=CDS;go_process=proteolysis|0006508||IEA,protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731924.1;locus_tag=HGK48_RS06495;product=ATP-dependent Clp protease adaptor ClpS;protein_id=WP_011731924.1;transl_table=11 NZ_JAATTN010000125.1 RefSeq gene 3799 4395 . - . ID=gene-HGK48_RS06500;Name=HGK48_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06500 NZ_JAATTN010000125.1 Protein Homology CDS 3799 4395 . - 0 ID=cds-WP_065840796.1;Parent=gene-HGK48_RS06500;Dbxref=GenBank:WP_065840796.1;Name=WP_065840796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849126.1;locus_tag=HGK48_RS06500;product=thioredoxin domain-containing protein;protein_id=WP_065840796.1;transl_table=11 NZ_JAATTN010000125.1 RefSeq gene 4413 4868 . - . ID=gene-HGK48_RS06505;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=HGK48_RS06505 NZ_JAATTN010000125.1 Protein Homology CDS 4413 4868 . - 0 ID=cds-WP_002849128.1;Parent=gene-HGK48_RS06505;Dbxref=GenBank:WP_002849128.1;Name=WP_002849128.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849128.1;locus_tag=HGK48_RS06505;product=SsrA-binding protein SmpB;protein_id=WP_002849128.1;transl_table=11 ##sequence-region NZ_JAATTN010000126.1 1 5026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000126.1 RefSeq region 1 5026 . + . ID=NZ_JAATTN010000126.1:1..5026;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000126.1 RefSeq gene 1 1153 . - . ID=gene-HGK48_RS06510;Name=HGK48_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06510;partial=true;start_range=.,1 NZ_JAATTN010000126.1 Protein Homology CDS 1 1153 . - 0 ID=cds-WP_168236764.1;Parent=gene-HGK48_RS06510;Dbxref=GenBank:WP_168236764.1;Name=WP_168236764.1;Ontology_term=GO:0008152,GO:0042279,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850011.1;locus_tag=HGK48_RS06510;partial=true;product=ammonia-forming cytochrome c nitrite reductase subunit c552;protein_id=WP_168236764.1;start_range=.,1;transl_table=11 NZ_JAATTN010000126.1 RefSeq gene 1169 1669 . - . ID=gene-HGK48_RS06515;Name=nrfH;gbkey=Gene;gene=nrfH;gene_biotype=protein_coding;locus_tag=HGK48_RS06515 NZ_JAATTN010000126.1 Protein Homology CDS 1169 1669 . - 0 ID=cds-WP_002850009.1;Parent=gene-HGK48_RS06515;Dbxref=GenBank:WP_002850009.1;Name=WP_002850009.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=nrfH;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850009.1;locus_tag=HGK48_RS06515;product=cytochrome c nitrite reductase small subunit;protein_id=WP_002850009.1;transl_table=11 NZ_JAATTN010000126.1 RefSeq gene 1919 3394 . - . ID=gene-HGK48_RS06520;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=HGK48_RS06520 NZ_JAATTN010000126.1 Protein Homology CDS 1919 3394 . - 0 ID=cds-WP_002850007.1;Parent=gene-HGK48_RS06520;Dbxref=GenBank:WP_002850007.1;Name=WP_002850007.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850007.1;locus_tag=HGK48_RS06520;product=sodium/proline symporter PutP;protein_id=WP_002850007.1;transl_table=11 NZ_JAATTN010000126.1 RefSeq gene 3398 5026 . - . ID=gene-HGK48_RS06525;Name=HGK48_RS06525;end_range=5026,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06525;partial=true NZ_JAATTN010000126.1 Protein Homology CDS 3398 5026 . - 0 ID=cds-WP_168236765.1;Parent=gene-HGK48_RS06525;Dbxref=GenBank:WP_168236765.1;Name=WP_168236765.1;Ontology_term=GO:0016491;end_range=5026,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732134.1;locus_tag=HGK48_RS06525;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_168236765.1;transl_table=11 ##sequence-region NZ_JAATTN010000127.1 1 5099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000127.1 RefSeq region 1 5099 . + . ID=NZ_JAATTN010000127.1:1..5099;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000127.1 RefSeq gene 1 2826 . + . ID=gene-HGK48_RS06530;Name=HGK48_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06530;partial=true;start_range=.,1 NZ_JAATTN010000127.1 GeneMarkS-2+ CDS 1 2826 . + 0 ID=cds-WP_168236766.1;Parent=gene-HGK48_RS06530;Dbxref=GenBank:WP_168236766.1;Name=WP_168236766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06530;partial=true;product=hypothetical protein;protein_id=WP_168236766.1;start_range=.,1;transl_table=11 NZ_JAATTN010000127.1 RefSeq gene 2855 3946 . - . ID=gene-HGK48_RS06535;Name=HGK48_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06535 NZ_JAATTN010000127.1 Protein Homology CDS 2855 3946 . - 0 ID=cds-WP_002849005.1;Parent=gene-HGK48_RS06535;Dbxref=GenBank:WP_002849005.1;Name=WP_002849005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849005.1;locus_tag=HGK48_RS06535;product=CinA family protein;protein_id=WP_002849005.1;transl_table=11 NZ_JAATTN010000127.1 RefSeq gene 3963 4577 . - . ID=gene-HGK48_RS06540;Name=HGK48_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06540 NZ_JAATTN010000127.1 GeneMarkS-2+ CDS 3963 4577 . - 0 ID=cds-WP_167497335.1;Parent=gene-HGK48_RS06540;Dbxref=GenBank:WP_167497335.1;Name=WP_167497335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06540;product=hypothetical protein;protein_id=WP_167497335.1;transl_table=11 NZ_JAATTN010000127.1 RefSeq gene 4696 5099 . + . ID=gene-HGK48_RS06545;Name=HGK48_RS06545;end_range=5099,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06545;partial=true NZ_JAATTN010000127.1 Protein Homology CDS 4696 5099 . + 0 ID=cds-WP_168236767.1;Parent=gene-HGK48_RS06545;Dbxref=GenBank:WP_168236767.1;Name=WP_168236767.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524;end_range=5099,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991961.1;locus_tag=HGK48_RS06545;partial=true;product=class I tRNA ligase family protein;protein_id=WP_168236767.1;transl_table=11 ##sequence-region NZ_JAATTN010000128.1 1 5057 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000128.1 RefSeq region 1 5057 . + . ID=NZ_JAATTN010000128.1:1..5057;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000128.1 RefSeq gene 1 924 . - . ID=gene-HGK48_RS06550;Name=HGK48_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06550;partial=true;start_range=.,1 NZ_JAATTN010000128.1 Protein Homology CDS 1 924 . - 0 ID=cds-WP_338153889.1;Parent=gene-HGK48_RS06550;Dbxref=GenBank:WP_338153889.1;Name=WP_338153889.1;Ontology_term=GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849767.1;locus_tag=HGK48_RS06550;partial=true;product=amino acid--tRNA ligase-related protein;protein_id=WP_338153889.1;start_range=.,1;transl_table=11 NZ_JAATTN010000128.1 RefSeq gene 938 1402 . - . ID=gene-HGK48_RS06555;Name=HGK48_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06555 NZ_JAATTN010000128.1 Protein Homology CDS 938 1402 . - 0 ID=cds-WP_002849768.1;Parent=gene-HGK48_RS06555;Dbxref=GenBank:WP_002849768.1;Name=WP_002849768.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732095.1;locus_tag=HGK48_RS06555;product=Fur family transcriptional regulator;protein_id=WP_002849768.1;transl_table=11 NZ_JAATTN010000128.1 RefSeq gene 1406 1981 . - . ID=gene-HGK48_RS06560;Name=HGK48_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06560 NZ_JAATTN010000128.1 Protein Homology CDS 1406 1981 . - 0 ID=cds-WP_002849774.1;Parent=gene-HGK48_RS06560;Dbxref=GenBank:WP_002849774.1;Name=WP_002849774.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849774.1;locus_tag=HGK48_RS06560;product=CvpA family protein;protein_id=WP_002849774.1;transl_table=11 NZ_JAATTN010000128.1 RefSeq gene 1981 3042 . - . ID=gene-HGK48_RS06565;Name=HGK48_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06565 NZ_JAATTN010000128.1 Protein Homology CDS 1981 3042 . - 0 ID=cds-WP_002849776.1;Parent=gene-HGK48_RS06565;Dbxref=GenBank:WP_002849776.1;Name=WP_002849776.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849776.1;locus_tag=HGK48_RS06565;product=type IV pilus twitching motility protein PilT;protein_id=WP_002849776.1;transl_table=11 NZ_JAATTN010000128.1 RefSeq gene 3046 3333 . - . ID=gene-HGK48_RS11090;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=HGK48_RS11090 NZ_JAATTN010000128.1 Protein Homology CDS 3046 3333 . - 0 ID=cds-WP_002849777.1;Parent=gene-HGK48_RS11090;Dbxref=GenBank:WP_002849777.1;Name=WP_002849777.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849777.1;locus_tag=HGK48_RS11090;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_002849777.1;transl_table=11 NZ_JAATTN010000128.1 RefSeq gene 3516 4115 . + . ID=gene-HGK48_RS06570;Name=HGK48_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06570 NZ_JAATTN010000128.1 Protein Homology CDS 3516 4115 . + 0 ID=cds-WP_230454695.1;Parent=gene-HGK48_RS06570;Dbxref=GenBank:WP_230454695.1;Name=WP_230454695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732096.1;locus_tag=HGK48_RS06570;product=hypothetical protein;protein_id=WP_230454695.1;transl_table=11 NZ_JAATTN010000128.1 RefSeq gene 4118 5057 . + . ID=gene-HGK48_RS06575;Name=HGK48_RS06575;end_range=5057,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06575;partial=true NZ_JAATTN010000128.1 Protein Homology CDS 4118 5057 . + 0 ID=cds-WP_168236768.1;Parent=gene-HGK48_RS06575;Dbxref=GenBank:WP_168236768.1;Name=WP_168236768.1;end_range=5057,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849780.1;locus_tag=HGK48_RS06575;partial=true;product=L-seryl-tRNA selenium transferase;protein_id=WP_168236768.1;transl_table=11 ##sequence-region NZ_JAATTN010000129.1 1 5047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000129.1 RefSeq region 1 5047 . + . ID=NZ_JAATTN010000129.1:1..5047;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000129.1 RefSeq gene 1 317 . - . ID=gene-HGK48_RS06580;Name=HGK48_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06580;partial=true;start_range=.,1 NZ_JAATTN010000129.1 GeneMarkS-2+ CDS 1 317 . - 0 ID=cds-WP_206120305.1;Parent=gene-HGK48_RS06580;Dbxref=GenBank:WP_206120305.1;Name=WP_206120305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06580;partial=true;product=thiamine phosphate synthase;protein_id=WP_206120305.1;start_range=.,1;transl_table=11 NZ_JAATTN010000129.1 RefSeq gene 512 1192 . - . ID=gene-HGK48_RS06585;Name=HGK48_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06585 NZ_JAATTN010000129.1 Protein Homology CDS 512 1192 . - 0 ID=cds-WP_002849211.1;Parent=gene-HGK48_RS06585;Dbxref=GenBank:WP_002849211.1;Name=WP_002849211.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344595.1;locus_tag=HGK48_RS06585;product=F0F1 ATP synthase subunit A;protein_id=WP_002849211.1;transl_table=11 NZ_JAATTN010000129.1 RefSeq gene 1246 2019 . - . ID=gene-HGK48_RS06590;Name=HGK48_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06590 NZ_JAATTN010000129.1 Protein Homology CDS 1246 2019 . - 0 ID=cds-WP_002849209.1;Parent=gene-HGK48_RS06590;Dbxref=GenBank:WP_002849209.1;Name=WP_002849209.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849209.1;locus_tag=HGK48_RS06590;product=TSUP family transporter;protein_id=WP_002849209.1;transl_table=11 NZ_JAATTN010000129.1 RefSeq gene 2092 2664 . - . ID=gene-HGK48_RS06595;Name=HGK48_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06595 NZ_JAATTN010000129.1 Protein Homology CDS 2092 2664 . - 0 ID=cds-WP_002849206.1;Parent=gene-HGK48_RS06595;Dbxref=GenBank:WP_002849206.1;Name=WP_002849206.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016176.6;locus_tag=HGK48_RS06595;product=YceI family protein;protein_id=WP_002849206.1;transl_table=11 NZ_JAATTN010000129.1 RefSeq gene 2724 4160 . - . ID=gene-HGK48_RS06600;Name=HGK48_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06600 NZ_JAATTN010000129.1 Protein Homology CDS 2724 4160 . - 0 ID=cds-WP_002849203.1;Parent=gene-HGK48_RS06600;Dbxref=GenBank:WP_002849203.1;Name=WP_002849203.1;Ontology_term=GO:0006813,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849203.1;locus_tag=HGK48_RS06600;product=potassium/proton antiporter;protein_id=WP_002849203.1;transl_table=11 NZ_JAATTN010000129.1 RefSeq gene 4173 4970 . - . ID=gene-HGK48_RS06605;Name=HGK48_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06605 NZ_JAATTN010000129.1 Protein Homology CDS 4173 4970 . - 0 ID=cds-WP_256364823.1;Parent=gene-HGK48_RS06605;Dbxref=GenBank:WP_256364823.1;Name=WP_256364823.1;Ontology_term=GO:0006813;gbkey=CDS;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: protein motif:HMM:NF014325.6;locus_tag=HGK48_RS06605;product=NAD-binding protein;protein_id=WP_256364823.1;transl_table=11 ##sequence-region NZ_JAATTN010000012.1 1 16251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000012.1 RefSeq region 1 16251 . + . ID=NZ_JAATTN010000012.1:1..16251;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000012.1 RefSeq pseudogene 1 654 . - . ID=gene-HGK48_RS01315;Name=HGK48_RS01315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS01315;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000012.1 GeneMarkS-2+ CDS 1 654 . - 0 ID=cds-HGK48_RS01315;Parent=gene-HGK48_RS01315;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01315;partial=true;product=apolipoprotein N-acyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 633 914 . + . ID=gene-HGK48_RS01320;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=HGK48_RS01320 NZ_JAATTN010000012.1 Protein Homology CDS 633 914 . + 0 ID=cds-WP_002849151.1;Parent=gene-HGK48_RS01320;Dbxref=GenBank:WP_002849151.1;Name=WP_002849151.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849151.1;locus_tag=HGK48_RS01320;product=preprotein translocase subunit YajC;protein_id=WP_002849151.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 907 2496 . + . ID=gene-HGK48_RS01325;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=HGK48_RS01325 NZ_JAATTN010000012.1 Protein Homology CDS 907 2496 . + 0 ID=cds-WP_002849152.1;Parent=gene-HGK48_RS01325;Dbxref=GenBank:WP_002849152.1;Name=WP_002849152.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849152.1;locus_tag=HGK48_RS01325;product=protein translocase subunit SecD;protein_id=WP_002849152.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 2496 3467 . + . ID=gene-HGK48_RS01330;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=HGK48_RS01330 NZ_JAATTN010000012.1 Protein Homology CDS 2496 3467 . + 0 ID=cds-WP_002849153.1;Parent=gene-HGK48_RS01330;Dbxref=GenBank:WP_002849153.1;Name=WP_002849153.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011989906.1;locus_tag=HGK48_RS01330;product=protein translocase subunit SecF;protein_id=WP_002849153.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 3477 3815 . + . ID=gene-HGK48_RS01335;Name=HGK48_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01335 NZ_JAATTN010000012.1 Protein Homology CDS 3477 3815 . + 0 ID=cds-WP_002849155.1;Parent=gene-HGK48_RS01335;Dbxref=GenBank:WP_002849155.1;Name=WP_002849155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018136531.1;locus_tag=HGK48_RS01335;product=DUF6394 family protein;protein_id=WP_002849155.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 3824 6259 . + . ID=gene-HGK48_RS01340;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=HGK48_RS01340 NZ_JAATTN010000012.1 Protein Homology CDS 3824 6259 . + 0 ID=cds-WP_002849157.1;Parent=gene-HGK48_RS01340;Dbxref=GenBank:WP_002849157.1;Name=WP_002849157.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849157.1;locus_tag=HGK48_RS01340;product=leucine--tRNA ligase;protein_id=WP_002849157.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 6261 6800 . + . ID=gene-HGK48_RS01345;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=HGK48_RS01345 NZ_JAATTN010000012.1 Protein Homology CDS 6261 6800 . + 0 ID=cds-WP_002849158.1;Parent=gene-HGK48_RS01345;Dbxref=GenBank:WP_002849158.1;Name=WP_002849158.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849158.1;locus_tag=HGK48_RS01345;product=LPS assembly lipoprotein LptE;protein_id=WP_002849158.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 6781 8325 . + . ID=gene-HGK48_RS01350;Name=HGK48_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01350 NZ_JAATTN010000012.1 Protein Homology CDS 6781 8325 . + 0 ID=cds-WP_011731929.1;Parent=gene-HGK48_RS01350;Dbxref=GenBank:WP_011731929.1;Name=WP_011731929.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=HGK48_RS01350;product=GGDEF domain-containing protein;protein_id=WP_011731929.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 8325 9494 . + . ID=gene-HGK48_RS01355;Name=HGK48_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01355 NZ_JAATTN010000012.1 Protein Homology CDS 8325 9494 . + 0 ID=cds-WP_002849159.1;Parent=gene-HGK48_RS01355;Dbxref=GenBank:WP_002849159.1;Name=WP_002849159.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941965.1;locus_tag=HGK48_RS01355;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_002849159.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 9484 10374 . + . ID=gene-HGK48_RS01360;Name=HGK48_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01360 NZ_JAATTN010000012.1 Protein Homology CDS 9484 10374 . + 0 ID=cds-WP_002849160.1;Parent=gene-HGK48_RS01360;Dbxref=GenBank:WP_002849160.1;Name=WP_002849160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849160.1;locus_tag=HGK48_RS01360;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_002849160.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 10323 10736 . + . ID=gene-HGK48_RS01365;Name=HGK48_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01365 NZ_JAATTN010000012.1 Protein Homology CDS 10323 10736 . + 0 ID=cds-WP_002849161.1;Parent=gene-HGK48_RS01365;Dbxref=GenBank:WP_002849161.1;Name=WP_002849161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849161.1;locus_tag=HGK48_RS01365;product=bactofilin family protein;protein_id=WP_002849161.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 10717 13674 . + . ID=gene-HGK48_RS01370;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=HGK48_RS01370 NZ_JAATTN010000012.1 Protein Homology CDS 10717 13674 . + 0 ID=cds-WP_024305251.1;Parent=gene-HGK48_RS01370;Dbxref=GenBank:WP_024305251.1;Name=WP_024305251.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849162.1;locus_tag=HGK48_RS01370;product=transcription-repair coupling factor;protein_id=WP_024305251.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 13671 14276 . + . ID=gene-HGK48_RS01375;Name=HGK48_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01375 NZ_JAATTN010000012.1 Protein Homology CDS 13671 14276 . + 0 ID=cds-WP_024305252.1;Parent=gene-HGK48_RS01375;Dbxref=GenBank:WP_024305252.1;Name=WP_024305252.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023540.6;locus_tag=HGK48_RS01375;product=putative metalloprotease CJM1_0395 family protein;protein_id=WP_024305252.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 14304 15044 . + . ID=gene-HGK48_RS01380;Name=HGK48_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01380 NZ_JAATTN010000012.1 Protein Homology CDS 14304 15044 . + 0 ID=cds-WP_024305253.1;Parent=gene-HGK48_RS01380;Dbxref=GenBank:WP_024305253.1;Name=WP_024305253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849164.1;locus_tag=HGK48_RS01380;product=DUF815 domain-containing protein;protein_id=WP_024305253.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 15028 15699 . + . ID=gene-HGK48_RS01385;Name=HGK48_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01385 NZ_JAATTN010000012.1 Protein Homology CDS 15028 15699 . + 0 ID=cds-WP_372683137.1;Parent=gene-HGK48_RS01385;Dbxref=GenBank:WP_372683137.1;Name=WP_372683137.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004320414.1;locus_tag=HGK48_RS01385;product=3-methyladenine DNA glycosylase;protein_id=WP_372683137.1;transl_table=11 NZ_JAATTN010000012.1 RefSeq gene 15755 16156 . + . ID=gene-HGK48_RS01390;Name=HGK48_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01390 NZ_JAATTN010000012.1 Protein Homology CDS 15755 16156 . + 0 ID=cds-WP_011731933.1;Parent=gene-HGK48_RS01390;Dbxref=GenBank:WP_011731933.1;Name=WP_011731933.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033674.1;locus_tag=HGK48_RS01390;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_011731933.1;transl_table=11 ##sequence-region NZ_JAATTN010000130.1 1 4994 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000130.1 RefSeq region 1 4994 . + . ID=NZ_JAATTN010000130.1:1..4994;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000130.1 RefSeq gene 1 356 . - . ID=gene-HGK48_RS06610;Name=HGK48_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06610;partial=true;start_range=.,1 NZ_JAATTN010000130.1 Protein Homology CDS 1 356 . - 0 ID=cds-WP_002849829.1;Parent=gene-HGK48_RS06610;Dbxref=GenBank:WP_002849829.1;Name=WP_002849829.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732105.1;locus_tag=HGK48_RS06610;partial=true;product=c-type cytochrome;protein_id=WP_002849829.1;start_range=.,1;transl_table=11 NZ_JAATTN010000130.1 RefSeq gene 435 1286 . + . ID=gene-HGK48_RS06615;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=HGK48_RS06615 NZ_JAATTN010000130.1 Protein Homology CDS 435 1286 . + 0 ID=cds-WP_010402657.1;Parent=gene-HGK48_RS06615;Dbxref=GenBank:WP_010402657.1;Name=WP_010402657.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010402657.1;locus_tag=HGK48_RS06615;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_010402657.1;transl_table=11 NZ_JAATTN010000130.1 RefSeq gene 1283 2140 . + . ID=gene-HGK48_RS06620;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=HGK48_RS06620 NZ_JAATTN010000130.1 Protein Homology CDS 1283 2140 . + 0 ID=cds-WP_002849827.1;Parent=gene-HGK48_RS06620;Dbxref=GenBank:WP_002849827.1;Name=WP_002849827.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849827.1;locus_tag=HGK48_RS06620;product=signal peptidase I;protein_id=WP_002849827.1;transl_table=11 NZ_JAATTN010000130.1 RefSeq gene 2133 2777 . + . ID=gene-HGK48_RS06625;Name=HGK48_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06625 NZ_JAATTN010000130.1 Protein Homology CDS 2133 2777 . + 0 ID=cds-WP_002849824.1;Parent=gene-HGK48_RS06625;Dbxref=GenBank:WP_002849824.1;Name=WP_002849824.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849824.1;locus_tag=HGK48_RS06625;product=site-2 protease family protein;protein_id=WP_002849824.1;transl_table=11 NZ_JAATTN010000130.1 RefSeq gene 2832 3278 . + . ID=gene-HGK48_RS06630;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=HGK48_RS06630 NZ_JAATTN010000130.1 Protein Homology CDS 2832 3278 . + 0 ID=cds-WP_002849823.1;Parent=gene-HGK48_RS06630;Dbxref=GenBank:WP_002849823.1;Name=WP_002849823.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849823.1;locus_tag=HGK48_RS06630;product=ribose 5-phosphate isomerase B;protein_id=WP_002849823.1;transl_table=11 NZ_JAATTN010000130.1 RefSeq gene 3272 3604 . + . ID=gene-HGK48_RS06635;Name=HGK48_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06635 NZ_JAATTN010000130.1 Protein Homology CDS 3272 3604 . + 0 ID=cds-WP_002849821.1;Parent=gene-HGK48_RS06635;Dbxref=GenBank:WP_002849821.1;Name=WP_002849821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009650005.1;locus_tag=HGK48_RS06635;product=membrane protein;protein_id=WP_002849821.1;transl_table=11 NZ_JAATTN010000130.1 RefSeq gene 3618 4166 . + . ID=gene-HGK48_RS06640;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=HGK48_RS06640 NZ_JAATTN010000130.1 Protein Homology CDS 3618 4166 . + 0 ID=cds-WP_002849820.1;Parent=gene-HGK48_RS06640;Dbxref=GenBank:WP_002849820.1;Name=WP_002849820.1;Ontology_term=GO:0006168,GO:0003999,GO:0005737;gbkey=CDS;gene=apt;go_component=cytoplasm|0005737||IEA;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849820.1;locus_tag=HGK48_RS06640;product=adenine phosphoribosyltransferase;protein_id=WP_002849820.1;transl_table=11 NZ_JAATTN010000130.1 RefSeq gene 4169 4780 . + . ID=gene-HGK48_RS06645;Name=HGK48_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06645 NZ_JAATTN010000130.1 Protein Homology CDS 4169 4780 . + 0 ID=cds-WP_002849819.1;Parent=gene-HGK48_RS06645;Dbxref=GenBank:WP_002849819.1;Name=WP_002849819.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849819.1;locus_tag=HGK48_RS06645;product=DedA family protein;protein_id=WP_002849819.1;transl_table=11 NZ_JAATTN010000130.1 RefSeq pseudogene 4761 4994 . + . ID=gene-HGK48_RS06650;Name=HGK48_RS06650;end_range=4994,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS06650;partial=true;pseudo=true NZ_JAATTN010000130.1 Protein Homology CDS 4761 4994 . + 0 ID=cds-HGK48_RS06650;Parent=gene-HGK48_RS06650;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4994,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732103.1;locus_tag=HGK48_RS06650;partial=true;product=leucyl aminopeptidase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000131.1 1 4954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000131.1 RefSeq region 1 4954 . + . ID=NZ_JAATTN010000131.1:1..4954;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000131.1 RefSeq gene 1 342 . - . ID=gene-HGK48_RS11535;Name=HGK48_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11535;partial=true;start_range=.,1 NZ_JAATTN010000131.1 Protein Homology CDS 1 342 . - 0 ID=cds-WP_394352680.1;Parent=gene-HGK48_RS11535;Dbxref=GenBank:WP_394352680.1;Name=WP_394352680.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025062.6;locus_tag=HGK48_RS11535;partial=true;product=CZB domain-containing protein;protein_id=WP_394352680.1;start_range=.,1;transl_table=11 NZ_JAATTN010000131.1 RefSeq pseudogene 337 624 . - . ID=gene-HGK48_RS11540;Name=HGK48_RS11540;end_range=624,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11540;partial=true;pseudo=true;start_range=.,337 NZ_JAATTN010000131.1 Protein Homology CDS 337 624 . - 0 ID=cds-HGK48_RS11540;Parent=gene-HGK48_RS11540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0007165,GO:0016020;end_range=624,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=HGK48_RS11540;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,337;transl_table=11 NZ_JAATTN010000131.1 RefSeq gene 1215 1442 . - . ID=gene-HGK48_RS06660;Name=HGK48_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06660 NZ_JAATTN010000131.1 Protein Homology CDS 1215 1442 . - 0 ID=cds-WP_002849526.1;Parent=gene-HGK48_RS06660;Dbxref=GenBank:WP_002849526.1;Name=WP_002849526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849526.1;locus_tag=HGK48_RS06660;product=YdcH family protein;protein_id=WP_002849526.1;transl_table=11 NZ_JAATTN010000131.1 RefSeq gene 1504 2691 . - . ID=gene-HGK48_RS06665;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=HGK48_RS06665 NZ_JAATTN010000131.1 Protein Homology CDS 1504 2691 . - 0 ID=cds-WP_002849525.1;Parent=gene-HGK48_RS06665;Dbxref=GenBank:WP_002849525.1;Name=WP_002849525.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-L-ornithine as donor|0004358||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651178.1;locus_tag=HGK48_RS06665;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_002849525.1;transl_table=11 NZ_JAATTN010000131.1 RefSeq pseudogene 2684 3815 . - . ID=gene-HGK48_RS06670;Name=HGK48_RS06670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS06670;pseudo=true NZ_JAATTN010000131.1 Protein Homology CDS 2684 3815 . - 0 ID=cds-HGK48_RS06670;Parent=gene-HGK48_RS06670;Note=frameshifted;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732024.1;locus_tag=HGK48_RS06670;product=potassium channel family protein;pseudo=true;transl_table=11 NZ_JAATTN010000131.1 RefSeq gene 3835 4026 . - . ID=gene-HGK48_RS06675;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=HGK48_RS06675 NZ_JAATTN010000131.1 Protein Homology CDS 3835 4026 . - 0 ID=cds-WP_002849521.1;Parent=gene-HGK48_RS06675;Dbxref=GenBank:WP_002849521.1;Name=WP_002849521.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651385.1;locus_tag=HGK48_RS06675;product=50S ribosomal protein L28;protein_id=WP_002849521.1;transl_table=11 NZ_JAATTN010000131.1 RefSeq gene 4123 4896 . - . ID=gene-HGK48_RS06680;Name=HGK48_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06680 NZ_JAATTN010000131.1 Protein Homology CDS 4123 4896 . - 0 ID=cds-WP_002849519.1;Parent=gene-HGK48_RS06680;Dbxref=GenBank:WP_002849519.1;Name=WP_002849519.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849519.1;locus_tag=HGK48_RS06680;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_002849519.1;transl_table=11 ##sequence-region NZ_JAATTN010000132.1 1 4935 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000132.1 RefSeq region 1 4935 . + . ID=NZ_JAATTN010000132.1:1..4935;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000132.1 RefSeq gene 77 1300 . + . ID=gene-HGK48_RS11240;Name=HGK48_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11240 NZ_JAATTN010000132.1 Protein Homology CDS 77 1300 . + 0 ID=cds-WP_240944821.1;Parent=gene-HGK48_RS11240;Dbxref=GenBank:WP_240944821.1;Name=WP_240944821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732287.1;locus_tag=HGK48_RS11240;product=hypothetical protein;protein_id=WP_240944821.1;transl_table=11 NZ_JAATTN010000132.1 RefSeq gene 1567 2007 . + . ID=gene-HGK48_RS06695;Name=HGK48_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06695 NZ_JAATTN010000132.1 GeneMarkS-2+ CDS 1567 2007 . + 0 ID=cds-WP_010402462.1;Parent=gene-HGK48_RS06695;Dbxref=GenBank:WP_010402462.1;Name=WP_010402462.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06695;product=hypothetical protein;protein_id=WP_010402462.1;transl_table=11 NZ_JAATTN010000132.1 RefSeq gene 2087 2437 . + . ID=gene-HGK48_RS06700;Name=HGK48_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06700 NZ_JAATTN010000132.1 GeneMarkS-2+ CDS 2087 2437 . + 0 ID=cds-WP_010402458.1;Parent=gene-HGK48_RS06700;Dbxref=GenBank:WP_010402458.1;Name=WP_010402458.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06700;product=hypothetical protein;protein_id=WP_010402458.1;transl_table=11 NZ_JAATTN010000132.1 RefSeq gene 2700 3170 . + . ID=gene-HGK48_RS06705;Name=HGK48_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06705 NZ_JAATTN010000132.1 GeneMarkS-2+ CDS 2700 3170 . + 0 ID=cds-WP_010402455.1;Parent=gene-HGK48_RS06705;Dbxref=GenBank:WP_010402455.1;Name=WP_010402455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06705;product=hypothetical protein;protein_id=WP_010402455.1;transl_table=11 NZ_JAATTN010000132.1 RefSeq gene 3305 4066 . - . ID=gene-HGK48_RS06710;Name=HGK48_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06710 NZ_JAATTN010000132.1 Protein Homology CDS 3305 4066 . - 0 ID=cds-WP_010402452.1;Parent=gene-HGK48_RS06710;Dbxref=GenBank:WP_010402452.1;Name=WP_010402452.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002854976.1;locus_tag=HGK48_RS06710;product=DNA adenine methylase;protein_id=WP_010402452.1;transl_table=11 NZ_JAATTN010000132.1 RefSeq gene 4120 4674 . - . ID=gene-HGK48_RS06715;Name=HGK48_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06715 NZ_JAATTN010000132.1 Protein Homology CDS 4120 4674 . - 0 ID=cds-WP_024305522.1;Parent=gene-HGK48_RS06715;Dbxref=GenBank:WP_024305522.1;Name=WP_024305522.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848769.1;locus_tag=HGK48_RS06715;product=glycoside hydrolase family 108 protein;protein_id=WP_024305522.1;transl_table=11 NZ_JAATTN010000132.1 RefSeq gene 4661 4935 . - . ID=gene-HGK48_RS06720;Name=HGK48_RS06720;end_range=4935,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06720;partial=true NZ_JAATTN010000132.1 Protein Homology CDS 4661 4935 . - 2 ID=cds-WP_168236770.1;Parent=gene-HGK48_RS06720;Dbxref=GenBank:WP_168236770.1;Name=WP_168236770.1;end_range=4935,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027409.6;locus_tag=HGK48_RS06720;partial=true;product=phage holin family protein;protein_id=WP_168236770.1;transl_table=11 ##sequence-region NZ_JAATTN010000133.1 1 4820 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000133.1 RefSeq region 1 4820 . + . ID=NZ_JAATTN010000133.1:1..4820;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000133.1 RefSeq gene 1 875 . - . ID=gene-HGK48_RS06725;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=HGK48_RS06725;partial=true;start_range=.,1 NZ_JAATTN010000133.1 Protein Homology CDS 1 875 . - 0 ID=cds-WP_168236771.1;Parent=gene-HGK48_RS06725;Dbxref=GenBank:WP_168236771.1;Name=WP_168236771.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343567.1;locus_tag=HGK48_RS06725;partial=true;product=F0F1 ATP synthase subunit beta;protein_id=WP_168236771.1;start_range=.,1;transl_table=11 NZ_JAATTN010000133.1 RefSeq gene 893 1780 . - . ID=gene-HGK48_RS06730;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=HGK48_RS06730 NZ_JAATTN010000133.1 Protein Homology CDS 893 1780 . - 0 ID=cds-WP_002850541.1;Parent=gene-HGK48_RS06730;Dbxref=GenBank:WP_002850541.1;Name=WP_002850541.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939426.1;locus_tag=HGK48_RS06730;product=ATP synthase F1 subunit gamma;protein_id=WP_002850541.1;transl_table=11 NZ_JAATTN010000133.1 RefSeq gene 1790 3307 . - . ID=gene-HGK48_RS06735;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=HGK48_RS06735 NZ_JAATTN010000133.1 Protein Homology CDS 1790 3307 . - 0 ID=cds-WP_002850542.1;Parent=gene-HGK48_RS06735;Dbxref=GenBank:WP_002850542.1;Name=WP_002850542.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850542.1;locus_tag=HGK48_RS06735;product=F0F1 ATP synthase subunit alpha;protein_id=WP_002850542.1;transl_table=11 NZ_JAATTN010000133.1 RefSeq gene 3322 3852 . - . ID=gene-HGK48_RS06740;Name=HGK48_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06740 NZ_JAATTN010000133.1 Protein Homology CDS 3322 3852 . - 0 ID=cds-WP_002850543.1;Parent=gene-HGK48_RS06740;Dbxref=GenBank:WP_002850543.1;Name=WP_002850543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850543.1;locus_tag=HGK48_RS06740;product=F0F1 ATP synthase subunit delta;protein_id=WP_002850543.1;transl_table=11 NZ_JAATTN010000133.1 RefSeq gene 3852 4370 . - . ID=gene-HGK48_RS06745;Name=HGK48_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06745 NZ_JAATTN010000133.1 Protein Homology CDS 3852 4370 . - 0 ID=cds-WP_002850544.1;Parent=gene-HGK48_RS06745;Dbxref=GenBank:WP_002850544.1;Name=WP_002850544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850544.1;locus_tag=HGK48_RS06745;product=F0F1 ATP synthase subunit B;protein_id=WP_002850544.1;transl_table=11 NZ_JAATTN010000133.1 RefSeq gene 4380 4802 . - . ID=gene-HGK48_RS06750;Name=HGK48_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06750 NZ_JAATTN010000133.1 Protein Homology CDS 4380 4802 . - 0 ID=cds-WP_002850545.1;Parent=gene-HGK48_RS06750;Dbxref=GenBank:WP_002850545.1;Name=WP_002850545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850545.1;locus_tag=HGK48_RS06750;product=FoF1 ATP synthase subunit B';protein_id=WP_002850545.1;transl_table=11 ##sequence-region NZ_JAATTN010000134.1 1 4811 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000134.1 RefSeq region 1 4811 . + . ID=NZ_JAATTN010000134.1:1..4811;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000134.1 RefSeq pseudogene 1 186 . + . ID=gene-HGK48_RS06755;Name=HGK48_RS06755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS06755;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000134.1 Protein Homology CDS 1 186 . + 0 ID=cds-HGK48_RS06755;Parent=gene-HGK48_RS06755;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732116.1;locus_tag=HGK48_RS06755;partial=true;product=DNA recombination protein RecN;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000134.1 RefSeq gene 252 1499 . + . ID=gene-HGK48_RS06760;Name=HGK48_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06760 NZ_JAATTN010000134.1 Protein Homology CDS 252 1499 . + 0 ID=cds-WP_002849855.1;Parent=gene-HGK48_RS06760;Dbxref=GenBank:WP_002849855.1;Name=WP_002849855.1;Ontology_term=GO:0000160,GO:0007165,GO:0000156,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849855.1;locus_tag=HGK48_RS06760;product=GGDEF domain-containing response regulator;protein_id=WP_002849855.1;transl_table=11 NZ_JAATTN010000134.1 RefSeq gene 1496 2260 . + . ID=gene-HGK48_RS06765;Name=HGK48_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06765 NZ_JAATTN010000134.1 Protein Homology CDS 1496 2260 . + 0 ID=cds-WP_002849854.1;Parent=gene-HGK48_RS06765;Dbxref=GenBank:WP_002849854.1;Name=WP_002849854.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849854.1;locus_tag=HGK48_RS06765;product=TatD family hydrolase;protein_id=WP_002849854.1;transl_table=11 NZ_JAATTN010000134.1 RefSeq gene 2269 3483 . + . ID=gene-HGK48_RS06770;Name=HGK48_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06770 NZ_JAATTN010000134.1 Protein Homology CDS 2269 3483 . + 0 ID=cds-WP_011732115.1;Parent=gene-HGK48_RS06770;Dbxref=GenBank:WP_011732115.1;Name=WP_011732115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011992059.1;locus_tag=HGK48_RS06770;product=lytic transglycosylase domain-containing protein;protein_id=WP_011732115.1;transl_table=11 NZ_JAATTN010000134.1 RefSeq gene 3530 4249 . + . ID=gene-HGK48_RS06775;Name=HGK48_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06775 NZ_JAATTN010000134.1 Protein Homology CDS 3530 4249 . + 0 ID=cds-WP_002849852.1;Parent=gene-HGK48_RS06775;Dbxref=GenBank:WP_002849852.1;Name=WP_002849852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849852.1;locus_tag=HGK48_RS06775;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_002849852.1;transl_table=11 NZ_JAATTN010000134.1 RefSeq gene 4250 4811 . + . ID=gene-HGK48_RS06780;Name=hisB;end_range=4811,.;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=HGK48_RS06780;partial=true NZ_JAATTN010000134.1 Protein Homology CDS 4250 4811 . + 0 ID=cds-WP_168236772.1;Parent=gene-HGK48_RS06780;Dbxref=GenBank:WP_168236772.1;Name=WP_168236772.1;end_range=4811,.;gbkey=CDS;gene=hisB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004509164.1;locus_tag=HGK48_RS06780;partial=true;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_168236772.1;transl_table=11 ##sequence-region NZ_JAATTN010000135.1 1 4664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000135.1 RefSeq region 1 4664 . + . ID=NZ_JAATTN010000135.1:1..4664;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000135.1 RefSeq gene 1 223 . + . ID=gene-HGK48_RS06785;Name=HGK48_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06785;partial=true;start_range=.,1 NZ_JAATTN010000135.1 Protein Homology CDS 1 223 . + 1 ID=cds-WP_206120306.1;Parent=gene-HGK48_RS06785;Dbxref=GenBank:WP_206120306.1;Name=WP_206120306.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731866.1;locus_tag=HGK48_RS06785;partial=true;product=YidC/Oxa1 family membrane protein insertase;protein_id=WP_206120306.1;start_range=.,1;transl_table=11 NZ_JAATTN010000135.1 RefSeq gene 213 1166 . + . ID=gene-HGK48_RS06790;Name=HGK48_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06790 NZ_JAATTN010000135.1 Protein Homology CDS 213 1166 . + 0 ID=cds-WP_011731867.1;Parent=gene-HGK48_RS06790;Dbxref=GenBank:WP_011731867.1;Name=WP_011731867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012857162.1;locus_tag=HGK48_RS06790;product=Jag N-terminal domain-containing protein;protein_id=WP_011731867.1;transl_table=11 NZ_JAATTN010000135.1 RefSeq gene 1163 2479 . + . ID=gene-HGK48_RS06795;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=HGK48_RS06795 NZ_JAATTN010000135.1 Protein Homology CDS 1163 2479 . + 0 ID=cds-WP_011731868.1;Parent=gene-HGK48_RS06795;Dbxref=GenBank:WP_011731868.1;Name=WP_011731868.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731868.1;locus_tag=HGK48_RS06795;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_011731868.1;transl_table=11 NZ_JAATTN010000135.1 RefSeq gene 2498 4664 . + . ID=gene-HGK48_RS06800;Name=purL;end_range=4664,.;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=HGK48_RS06800;partial=true NZ_JAATTN010000135.1 Protein Homology CDS 2498 4664 . + 0 ID=cds-WP_168236773.1;Parent=gene-HGK48_RS06800;Dbxref=GenBank:WP_168236773.1;Name=WP_168236773.1;Ontology_term=GO:0006189,GO:0004642;end_range=4664,.;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004320296.1;locus_tag=HGK48_RS06800;partial=true;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_168236773.1;transl_table=11 ##sequence-region NZ_JAATTN010000136.1 1 4737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000136.1 RefSeq region 1 4737 . + . ID=NZ_JAATTN010000136.1:1..4737;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000136.1 RefSeq gene 1 311 . - . ID=gene-HGK48_RS06805;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=HGK48_RS06805;partial=true;start_range=.,1 NZ_JAATTN010000136.1 Protein Homology CDS 1 311 . - 0 ID=cds-WP_168236774.1;Parent=gene-HGK48_RS06805;Dbxref=GenBank:WP_168236774.1;Name=WP_168236774.1;Ontology_term=GO:0043953,GO:0065002,GO:0009977,GO:0016020,GO:0033281;gbkey=CDS;gene=tatC;go_component=membrane|0016020||IEA,TAT protein transport complex|0033281||IEA;go_function=proton motive force dependent protein transmembrane transporter activity|0009977||IEA;go_process=protein transport by the Tat complex|0043953||IEA,intracellular protein transmembrane transport|0065002||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849731.1;locus_tag=HGK48_RS06805;partial=true;product=twin-arginine translocase subunit TatC;protein_id=WP_168236774.1;start_range=.,1;transl_table=11 NZ_JAATTN010000136.1 RefSeq gene 311 766 . - . ID=gene-HGK48_RS06810;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=HGK48_RS06810 NZ_JAATTN010000136.1 Protein Homology CDS 311 766 . - 0 ID=cds-WP_002849729.1;Parent=gene-HGK48_RS06810;Dbxref=GenBank:WP_002849729.1;Name=WP_002849729.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849729.1;locus_tag=HGK48_RS06810;product=Sec-independent protein translocase protein TatB;protein_id=WP_002849729.1;transl_table=11 NZ_JAATTN010000136.1 RefSeq gene 822 1862 . - . ID=gene-HGK48_RS06815;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=HGK48_RS06815 NZ_JAATTN010000136.1 Protein Homology CDS 822 1862 . - 0 ID=cds-WP_002849727.1;Parent=gene-HGK48_RS06815;Dbxref=GenBank:WP_002849727.1;Name=WP_002849727.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849727.1;locus_tag=HGK48_RS06815;product=radical SAM family heme chaperone HemW;protein_id=WP_002849727.1;transl_table=11 NZ_JAATTN010000136.1 RefSeq gene 1977 2447 . + . ID=gene-HGK48_RS06820;Name=HGK48_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06820 NZ_JAATTN010000136.1 Protein Homology CDS 1977 2447 . + 0 ID=cds-WP_002849725.1;Parent=gene-HGK48_RS06820;Dbxref=GenBank:WP_002849725.1;Name=WP_002849725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002789857.1;locus_tag=HGK48_RS06820;product=RNA pyrophosphohydrolase;protein_id=WP_002849725.1;transl_table=11 NZ_JAATTN010000136.1 RefSeq gene 2447 3661 . + . ID=gene-HGK48_RS06825;Name=HGK48_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06825 NZ_JAATTN010000136.1 Protein Homology CDS 2447 3661 . + 0 ID=cds-WP_002849723.1;Parent=gene-HGK48_RS06825;Dbxref=GenBank:WP_002849723.1;Name=WP_002849723.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849723.1;locus_tag=HGK48_RS06825;product=aspartate kinase;protein_id=WP_002849723.1;transl_table=11 NZ_JAATTN010000136.1 RefSeq gene 3661 4203 . + . ID=gene-HGK48_RS06830;Name=HGK48_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06830 NZ_JAATTN010000136.1 Protein Homology CDS 3661 4203 . + 0 ID=cds-WP_011732088.1;Parent=gene-HGK48_RS06830;Dbxref=GenBank:WP_011732088.1;Name=WP_011732088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004292099.1;locus_tag=HGK48_RS06830;product=HobA family DNA replication regulator;protein_id=WP_011732088.1;transl_table=11 NZ_JAATTN010000136.1 RefSeq gene 4212 4737 . + . ID=gene-HGK48_RS06835;Name=HGK48_RS06835;end_range=4737,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06835;partial=true NZ_JAATTN010000136.1 Protein Homology CDS 4212 4737 . + 0 ID=cds-WP_168236775.1;Parent=gene-HGK48_RS06835;Dbxref=GenBank:WP_168236775.1;Name=WP_168236775.1;end_range=4737,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849719.1;locus_tag=HGK48_RS06835;partial=true;product=DNA polymerase III subunit delta';protein_id=WP_168236775.1;transl_table=11 ##sequence-region NZ_JAATTN010000137.1 1 4584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000137.1 RefSeq region 1 4584 . + . ID=NZ_JAATTN010000137.1:1..4584;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000137.1 RefSeq gene 1 309 . + . ID=gene-HGK48_RS06840;Name=HGK48_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06840;partial=true;start_range=.,1 NZ_JAATTN010000137.1 Protein Homology CDS 1 309 . + 0 ID=cds-WP_168236776.1;Parent=gene-HGK48_RS06840;Dbxref=GenBank:WP_168236776.1;Name=WP_168236776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731837.1;locus_tag=HGK48_RS06840;partial=true;product=hypothetical protein;protein_id=WP_168236776.1;start_range=.,1;transl_table=11 NZ_JAATTN010000137.1 RefSeq gene 727 1131 . + . ID=gene-HGK48_RS06845;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=HGK48_RS06845 NZ_JAATTN010000137.1 Protein Homology CDS 727 1131 . + 0 ID=cds-WP_002848706.1;Parent=gene-HGK48_RS06845;Dbxref=GenBank:WP_002848706.1;Name=WP_002848706.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848706.1;locus_tag=HGK48_RS06845;product=rRNA maturation RNase YbeY;protein_id=WP_002848706.1;transl_table=11 NZ_JAATTN010000137.1 RefSeq gene 1133 1669 . - . ID=gene-HGK48_RS06850;Name=HGK48_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06850 NZ_JAATTN010000137.1 GeneMarkS-2+ CDS 1133 1669 . - 0 ID=cds-WP_011731836.1;Parent=gene-HGK48_RS06850;Dbxref=GenBank:WP_011731836.1;Name=WP_011731836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06850;product=hypothetical protein;protein_id=WP_011731836.1;transl_table=11 NZ_JAATTN010000137.1 RefSeq gene 1666 2580 . - . ID=gene-HGK48_RS06855;Name=HGK48_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06855 NZ_JAATTN010000137.1 Protein Homology CDS 1666 2580 . - 0 ID=cds-WP_002848704.1;Parent=gene-HGK48_RS06855;Dbxref=GenBank:WP_002848704.1;Name=WP_002848704.1;Ontology_term=GO:0015914;gbkey=CDS;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: protein motif:HMM:NF014523.6;locus_tag=HGK48_RS06855;product=MlaD family protein;protein_id=WP_002848704.1;transl_table=11 NZ_JAATTN010000137.1 RefSeq gene 2570 3310 . - . ID=gene-HGK48_RS06860;Name=HGK48_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06860 NZ_JAATTN010000137.1 Protein Homology CDS 2570 3310 . - 0 ID=cds-WP_011731835.1;Parent=gene-HGK48_RS06860;Dbxref=GenBank:WP_011731835.1;Name=WP_011731835.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848701.1;locus_tag=HGK48_RS06860;product=ABC transporter ATP-binding protein;protein_id=WP_011731835.1;transl_table=11 NZ_JAATTN010000137.1 RefSeq gene 3307 4335 . - . ID=gene-HGK48_RS06865;Name=HGK48_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06865 NZ_JAATTN010000137.1 Protein Homology CDS 3307 4335 . - 0 ID=cds-WP_234446198.1;Parent=gene-HGK48_RS06865;Dbxref=GenBank:WP_234446198.1;Name=WP_234446198.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012108452.1;locus_tag=HGK48_RS06865;product=MlaE family ABC transporter permease;protein_id=WP_234446198.1;transl_table=11 NZ_JAATTN010000137.1 RefSeq gene 4378 4584 . - . ID=gene-HGK48_RS06870;Name=HGK48_RS06870;end_range=4584,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06870;partial=true NZ_JAATTN010000137.1 Protein Homology CDS 4378 4584 . - 0 ID=cds-WP_168236777.1;Parent=gene-HGK48_RS06870;Dbxref=GenBank:WP_168236777.1;Name=WP_168236777.1;end_range=4584,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731834.1;locus_tag=HGK48_RS06870;partial=true;product=AI-2E family transporter;protein_id=WP_168236777.1;transl_table=11 ##sequence-region NZ_JAATTN010000138.1 1 4623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000138.1 RefSeq region 1 4623 . + . ID=NZ_JAATTN010000138.1:1..4623;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000138.1 RefSeq pseudogene 1 412 . + . ID=gene-HGK48_RS06875;Name=HGK48_RS06875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS06875;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000138.1 Protein Homology CDS 1 412 . + 1 ID=cds-HGK48_RS06875;Parent=gene-HGK48_RS06875;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849695.1;locus_tag=HGK48_RS06875;partial=true;product=DHH family phosphoesterase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000138.1 RefSeq gene 409 642 . + . ID=gene-HGK48_RS06880;Name=HGK48_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06880 NZ_JAATTN010000138.1 Protein Homology CDS 409 642 . + 0 ID=cds-WP_002849694.1;Parent=gene-HGK48_RS06880;Dbxref=GenBank:WP_002849694.1;Name=WP_002849694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849694.1;locus_tag=HGK48_RS06880;product=hypothetical protein;protein_id=WP_002849694.1;transl_table=11 NZ_JAATTN010000138.1 RefSeq gene 812 958 . - . ID=gene-HGK48_RS11545;Name=HGK48_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11545 NZ_JAATTN010000138.1 Protein Homology CDS 812 958 . - 0 ID=cds-WP_011732079.1;Parent=gene-HGK48_RS11545;Dbxref=GenBank:WP_011732079.1;Name=WP_011732079.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=HGK48_RS11545;product=hypothetical protein;protein_id=WP_011732079.1;transl_table=11 NZ_JAATTN010000138.1 RefSeq gene 1327 2115 . + . ID=gene-HGK48_RS06890;Name=HGK48_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06890 NZ_JAATTN010000138.1 Protein Homology CDS 1327 2115 . + 0 ID=cds-WP_002849691.1;Parent=gene-HGK48_RS06890;Dbxref=GenBank:WP_002849691.1;Name=WP_002849691.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849691.1;locus_tag=HGK48_RS06890;product=HrcA family transcriptional regulator;protein_id=WP_002849691.1;transl_table=11 NZ_JAATTN010000138.1 RefSeq gene 2112 2633 . + . ID=gene-HGK48_RS06895;Name=HGK48_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06895 NZ_JAATTN010000138.1 Protein Homology CDS 2112 2633 . + 0 ID=cds-WP_002849690.1;Parent=gene-HGK48_RS06895;Dbxref=GenBank:WP_002849690.1;Name=WP_002849690.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732078.1;locus_tag=HGK48_RS06895;product=nucleotide exchange factor GrpE;protein_id=WP_002849690.1;transl_table=11 NZ_JAATTN010000138.1 RefSeq gene 2672 4552 . + . ID=gene-HGK48_RS06900;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=HGK48_RS06900 NZ_JAATTN010000138.1 Protein Homology CDS 2672 4552 . + 0 ID=cds-WP_011732077.1;Parent=gene-HGK48_RS06900;Dbxref=GenBank:WP_011732077.1;Name=WP_011732077.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344166.1;locus_tag=HGK48_RS06900;product=molecular chaperone DnaK;protein_id=WP_011732077.1;transl_table=11 ##sequence-region NZ_JAATTN010000139.1 1 4619 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000139.1 RefSeq region 1 4619 . + . ID=NZ_JAATTN010000139.1:1..4619;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000139.1 RefSeq gene 54 695 . + . ID=gene-HGK48_RS06905;Name=HGK48_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06905 NZ_JAATTN010000139.1 Protein Homology CDS 54 695 . + 0 ID=cds-WP_002849248.1;Parent=gene-HGK48_RS06905;Dbxref=GenBank:WP_002849248.1;Name=WP_002849248.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849248.1;locus_tag=HGK48_RS06905;product=Crp/Fnr family transcriptional regulator;protein_id=WP_002849248.1;transl_table=11 NZ_JAATTN010000139.1 RefSeq gene 818 1375 . + . ID=gene-HGK48_RS06910;Name=HGK48_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06910 NZ_JAATTN010000139.1 Protein Homology CDS 818 1375 . + 0 ID=cds-WP_223261866.1;Parent=gene-HGK48_RS06910;Dbxref=GenBank:WP_223261866.1;Name=WP_223261866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849250.1;locus_tag=HGK48_RS06910;product=cytochrome c3 family protein;protein_id=WP_223261866.1;transl_table=11 NZ_JAATTN010000139.1 RefSeq gene 1387 2772 . + . ID=gene-HGK48_RS06915;Name=HGK48_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06915 NZ_JAATTN010000139.1 Protein Homology CDS 1387 2772 . + 0 ID=cds-WP_002849252.1;Parent=gene-HGK48_RS06915;Dbxref=GenBank:WP_002849252.1;Name=WP_002849252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849252.1;locus_tag=HGK48_RS06915;product=multiheme c-type cytochrome;protein_id=WP_002849252.1;transl_table=11 NZ_JAATTN010000139.1 RefSeq gene 3624 4619 . - . ID=gene-HGK48_RS06920;Name=HGK48_RS06920;end_range=4619,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06920;partial=true NZ_JAATTN010000139.1 Protein Homology CDS 3624 4619 . - 0 ID=cds-WP_168236778.1;Parent=gene-HGK48_RS06920;Dbxref=GenBank:WP_168236778.1;Name=WP_168236778.1;Ontology_term=GO:0009234,GO:0016765,GO:0051536;end_range=4619,.;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343896.1;locus_tag=HGK48_RS06920;partial=true;product=dehypoxanthine futalosine cyclase;protein_id=WP_168236778.1;transl_table=11 ##sequence-region NZ_JAATTN010000013.1 1 16029 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000013.1 RefSeq region 1 16029 . + . ID=NZ_JAATTN010000013.1:1..16029;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000013.1 RefSeq gene 114 764 . - . ID=gene-HGK48_RS01395;Name=HGK48_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01395 NZ_JAATTN010000013.1 Protein Homology CDS 114 764 . - 0 ID=cds-WP_002850721.1;Parent=gene-HGK48_RS01395;Dbxref=GenBank:WP_002850721.1;Name=WP_002850721.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850721.1;locus_tag=HGK48_RS01395;product=potassium channel family protein;protein_id=WP_002850721.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 761 2089 . - . ID=gene-HGK48_RS01400;Name=HGK48_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01400 NZ_JAATTN010000013.1 Protein Homology CDS 761 2089 . - 0 ID=cds-WP_011732295.1;Parent=gene-HGK48_RS01400;Dbxref=GenBank:WP_011732295.1;Name=WP_011732295.1;Ontology_term=GO:0015379,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=potassium:chloride symporter activity|0015379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732295.1;locus_tag=HGK48_RS01400;product=TrkH family potassium uptake protein;protein_id=WP_011732295.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 2090 3100 . - . ID=gene-HGK48_RS01405;Name=HGK48_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01405 NZ_JAATTN010000013.1 Protein Homology CDS 2090 3100 . - 0 ID=cds-WP_002850719.1;Parent=gene-HGK48_RS01405;Dbxref=GenBank:WP_002850719.1;Name=WP_002850719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850719.1;locus_tag=HGK48_RS01405;product=AI-2E family transporter;protein_id=WP_002850719.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 3248 3922 . + . ID=gene-HGK48_RS01410;Name=HGK48_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01410 NZ_JAATTN010000013.1 GeneMarkS-2+ CDS 3248 3922 . + 0 ID=cds-WP_002850717.1;Parent=gene-HGK48_RS01410;Dbxref=GenBank:WP_002850717.1;Name=WP_002850717.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01410;product=hypothetical protein;protein_id=WP_002850717.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 4013 5998 . + . ID=gene-HGK48_RS01415;Name=HGK48_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01415 NZ_JAATTN010000013.1 Protein Homology CDS 4013 5998 . + 0 ID=cds-WP_002850715.1;Parent=gene-HGK48_RS01415;Dbxref=GenBank:WP_002850715.1;Name=WP_002850715.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014075.6;locus_tag=HGK48_RS01415;product=motility associated factor glycosyltransferase family protein;protein_id=WP_002850715.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 6012 6467 . + . ID=gene-HGK48_RS01420;Name=HGK48_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01420 NZ_JAATTN010000013.1 Protein Homology CDS 6012 6467 . + 0 ID=cds-WP_168236640.1;Parent=gene-HGK48_RS01420;Dbxref=GenBank:WP_168236640.1;Name=WP_168236640.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF025217.6;locus_tag=HGK48_RS01420;product=class I SAM-dependent methyltransferase;protein_id=WP_168236640.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 6454 7578 . + . ID=gene-HGK48_RS01425;Name=HGK48_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01425 NZ_JAATTN010000013.1 Protein Homology CDS 6454 7578 . + 0 ID=cds-WP_168236641.1;Parent=gene-HGK48_RS01425;Dbxref=GenBank:WP_168236641.1;Name=WP_168236641.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021624.6;locus_tag=HGK48_RS01425;product=methyltransferase regulatory domain-containing protein;protein_id=WP_168236641.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 7746 9308 . + . ID=gene-HGK48_RS01430;Name=HGK48_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01430 NZ_JAATTN010000013.1 Protein Homology CDS 7746 9308 . + 0 ID=cds-WP_168236642.1;Parent=gene-HGK48_RS01430;Dbxref=GenBank:WP_168236642.1;Name=WP_168236642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850711.1;locus_tag=HGK48_RS01430;product=flagellin B;protein_id=WP_168236642.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 9507 11066 . + . ID=gene-HGK48_RS01435;Name=HGK48_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01435 NZ_JAATTN010000013.1 Protein Homology CDS 9507 11066 . + 0 ID=cds-WP_002850708.1;Parent=gene-HGK48_RS01435;Dbxref=GenBank:WP_002850708.1;Name=WP_002850708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850708.1;locus_tag=HGK48_RS01435;product=flagellin B;protein_id=WP_002850708.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 11263 11712 . - . ID=gene-HGK48_RS01440;Name=pseH;gbkey=Gene;gene=pseH;gene_biotype=protein_coding;locus_tag=HGK48_RS01440 NZ_JAATTN010000013.1 Protein Homology CDS 11263 11712 . - 0 ID=cds-WP_002850707.1;Parent=gene-HGK48_RS01440;Dbxref=GenBank:WP_002850707.1;Name=WP_002850707.1;Ontology_term=GO:0009058,GO:0008080;gbkey=CDS;gene=pseH;go_function=N-acetyltransferase activity|0008080||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:TIGR03585.1;locus_tag=HGK48_RS01440;product=UDP-4-amino-4%2C6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase;protein_id=WP_002850707.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 11747 12742 . - . ID=gene-HGK48_RS01445;Name=pseB;gbkey=Gene;gene=pseB;gene_biotype=protein_coding;locus_tag=HGK48_RS01445 NZ_JAATTN010000013.1 Protein Homology CDS 11747 12742 . - 0 ID=cds-WP_002850705.1;Parent=gene-HGK48_RS01445;Dbxref=GenBank:WP_002850705.1;Name=WP_002850705.1;gbkey=CDS;gene=pseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850705.1;locus_tag=HGK48_RS01445;product=UDP-N-acetylglucosamine 4%2C6-dehydratase (inverting);protein_id=WP_002850705.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 12783 13526 . - . ID=gene-HGK48_RS01450;Name=HGK48_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01450 NZ_JAATTN010000013.1 Protein Homology CDS 12783 13526 . - 0 ID=cds-WP_002850702.1;Parent=gene-HGK48_RS01450;Dbxref=GenBank:WP_002850702.1;Name=WP_002850702.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850702.1;locus_tag=HGK48_RS01450;product=phosphocholine cytidylyltransferase family protein;protein_id=WP_002850702.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 13523 14107 . - . ID=gene-HGK48_RS01455;Name=HGK48_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01455 NZ_JAATTN010000013.1 Protein Homology CDS 13523 14107 . - 0 ID=cds-WP_002850700.1;Parent=gene-HGK48_RS01455;Dbxref=GenBank:WP_002850700.1;Name=WP_002850700.1;Note=Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26.;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012345.6;locus_tag=HGK48_RS01455;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_002850700.1;transl_table=11 NZ_JAATTN010000013.1 RefSeq gene 14104 16029 . - . ID=gene-HGK48_RS01460;Name=HGK48_RS01460;end_range=16029,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01460;partial=true NZ_JAATTN010000013.1 Protein Homology CDS 14104 16029 . - 0 ID=cds-WP_168236643.1;Parent=gene-HGK48_RS01460;Dbxref=GenBank:WP_168236643.1;Name=WP_168236643.1;Ontology_term=GO:0016310,GO:0016772;end_range=16029,.;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF004508.0;locus_tag=HGK48_RS01460;partial=true;product=PEP-utilizing enzyme;protein_id=WP_168236643.1;transl_table=11 ##sequence-region NZ_JAATTN010000140.1 1 4615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000140.1 RefSeq region 1 4615 . + . ID=NZ_JAATTN010000140.1:1..4615;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000140.1 RefSeq gene 142 3696 . + . ID=gene-HGK48_RS06925;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=HGK48_RS06925 NZ_JAATTN010000140.1 Protein Homology CDS 142 3696 . + 0 ID=cds-WP_011731797.1;Parent=gene-HGK48_RS06925;Dbxref=GenBank:WP_011731797.1;Name=WP_011731797.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731797.1;locus_tag=HGK48_RS06925;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_011731797.1;transl_table=11 NZ_JAATTN010000140.1 RefSeq gene 3808 4368 . + . ID=gene-HGK48_RS06930;Name=HGK48_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06930 NZ_JAATTN010000140.1 Protein Homology CDS 3808 4368 . + 0 ID=cds-WP_002848580.1;Parent=gene-HGK48_RS06930;Dbxref=GenBank:WP_002848580.1;Name=WP_002848580.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036646.6;locus_tag=HGK48_RS06930;product=DUF5416 family protein;protein_id=WP_002848580.1;transl_table=11 NZ_JAATTN010000140.1 RefSeq pseudogene 4395 4615 . + . ID=gene-HGK48_RS06935;Name=HGK48_RS06935;end_range=4615,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS06935;partial=true;pseudo=true NZ_JAATTN010000140.1 GeneMarkS-2+ CDS 4395 4615 . + 0 ID=cds-HGK48_RS06935;Parent=gene-HGK48_RS06935;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4615,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06935;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000141.1 1 4610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000141.1 RefSeq region 1 4610 . + . ID=NZ_JAATTN010000141.1:1..4610;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000141.1 RefSeq gene 1 408 . + . ID=gene-HGK48_RS06940;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=HGK48_RS06940;partial=true;start_range=.,1 NZ_JAATTN010000141.1 Protein Homology CDS 1 408 . + 0 ID=cds-WP_206120307.1;Parent=gene-HGK48_RS06940;Dbxref=GenBank:WP_206120307.1;Name=WP_206120307.1;Ontology_term=GO:0043953,GO:0065002,GO:0009977,GO:0016020,GO:0033281;gbkey=CDS;gene=tatC;go_component=membrane|0016020||IEA,TAT protein transport complex|0033281||IEA;go_function=proton motive force dependent protein transmembrane transporter activity|0009977||IEA;go_process=protein transport by the Tat complex|0043953||IEA,intracellular protein transmembrane transport|0065002||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849731.1;locus_tag=HGK48_RS06940;partial=true;product=twin-arginine translocase subunit TatC;protein_id=WP_206120307.1;start_range=.,1;transl_table=11 NZ_JAATTN010000141.1 RefSeq gene 405 1424 . + . ID=gene-HGK48_RS06945;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=HGK48_RS06945 NZ_JAATTN010000141.1 Protein Homology CDS 405 1424 . + 0 ID=cds-WP_002849734.1;Parent=gene-HGK48_RS06945;Dbxref=GenBank:WP_002849734.1;Name=WP_002849734.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849734.1;locus_tag=HGK48_RS06945;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_002849734.1;transl_table=11 NZ_JAATTN010000141.1 RefSeq gene 1434 2642 . + . ID=gene-HGK48_RS06950;Name=HGK48_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06950 NZ_JAATTN010000141.1 GeneMarkS-2+ CDS 1434 2642 . + 0 ID=cds-WP_065838969.1;Parent=gene-HGK48_RS06950;Dbxref=GenBank:WP_065838969.1;Name=WP_065838969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS06950;product=hypothetical protein;protein_id=WP_065838969.1;transl_table=11 NZ_JAATTN010000141.1 RefSeq gene 2663 3526 . - . ID=gene-HGK48_RS06955;Name=HGK48_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06955 NZ_JAATTN010000141.1 Protein Homology CDS 2663 3526 . - 0 ID=cds-WP_002849738.1;Parent=gene-HGK48_RS06955;Dbxref=GenBank:WP_002849738.1;Name=WP_002849738.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011812724.1;locus_tag=HGK48_RS06955;product=SAM-dependent methyltransferase;protein_id=WP_002849738.1;transl_table=11 NZ_JAATTN010000141.1 RefSeq gene 3534 3908 . - . ID=gene-HGK48_RS06960;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=HGK48_RS06960 NZ_JAATTN010000141.1 Protein Homology CDS 3534 3908 . - 0 ID=cds-WP_002849740.1;Parent=gene-HGK48_RS06960;Dbxref=GenBank:WP_002849740.1;Name=WP_002849740.1;gbkey=CDS;gene=ruvX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849740.1;locus_tag=HGK48_RS06960;product=Holliday junction resolvase RuvX;protein_id=WP_002849740.1;transl_table=11 NZ_JAATTN010000141.1 RefSeq gene 3905 4366 . - . ID=gene-HGK48_RS06965;Name=HGK48_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06965 NZ_JAATTN010000141.1 Protein Homology CDS 3905 4366 . - 0 ID=cds-WP_240944822.1;Parent=gene-HGK48_RS06965;Dbxref=GenBank:WP_240944822.1;Name=WP_240944822.1;Ontology_term=GO:0009294;gbkey=CDS;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: protein motif:HMM:NF014533.7;locus_tag=HGK48_RS06965;product=DNA-processing protein DprA;protein_id=WP_240944822.1;transl_table=11 NZ_JAATTN010000141.1 RefSeq gene 4339 4610 . + . ID=gene-HGK48_RS06970;Name=HGK48_RS06970;end_range=4610,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06970;partial=true NZ_JAATTN010000141.1 Protein Homology CDS 4339 4610 . + 0 ID=cds-WP_240944823.1;Parent=gene-HGK48_RS06970;Dbxref=GenBank:WP_240944823.1;Name=WP_240944823.1;Ontology_term=GO:0009294;end_range=4610,.;gbkey=CDS;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849743.1;locus_tag=HGK48_RS06970;partial=true;product=DNA-processing protein DprA;protein_id=WP_240944823.1;transl_table=11 ##sequence-region NZ_JAATTN010000142.1 1 4553 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000142.1 RefSeq region 1 4553 . + . ID=NZ_JAATTN010000142.1:1..4553;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000142.1 RefSeq pseudogene 1 193 . + . ID=gene-HGK48_RS06975;Name=HGK48_RS06975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS06975;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000142.1 Protein Homology CDS 1 193 . + 1 ID=cds-HGK48_RS06975;Parent=gene-HGK48_RS06975;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850175.1;locus_tag=HGK48_RS06975;partial=true;product=PDC sensor domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000142.1 RefSeq gene 177 788 . + . ID=gene-HGK48_RS06980;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=HGK48_RS06980 NZ_JAATTN010000142.1 Protein Homology CDS 177 788 . + 0 ID=cds-WP_002850173.1;Parent=gene-HGK48_RS06980;Dbxref=GenBank:WP_002850173.1;Name=WP_002850173.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850173.1;locus_tag=HGK48_RS06980;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002850173.1;transl_table=11 NZ_JAATTN010000142.1 RefSeq gene 788 1498 . + . ID=gene-HGK48_RS06985;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=HGK48_RS06985 NZ_JAATTN010000142.1 Protein Homology CDS 788 1498 . + 0 ID=cds-WP_002850171.1;Parent=gene-HGK48_RS06985;Dbxref=GenBank:WP_002850171.1;Name=WP_002850171.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850171.1;locus_tag=HGK48_RS06985;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_002850171.1;transl_table=11 NZ_JAATTN010000142.1 RefSeq gene 1564 1929 . + . ID=gene-HGK48_RS06990;Name=HGK48_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06990 NZ_JAATTN010000142.1 Protein Homology CDS 1564 1929 . + 0 ID=cds-WP_002850168.1;Parent=gene-HGK48_RS06990;Dbxref=GenBank:WP_002850168.1;Name=WP_002850168.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850168.1;locus_tag=HGK48_RS06990;product=chemotaxis response regulator CheY;protein_id=WP_002850168.1;transl_table=11 NZ_JAATTN010000142.1 RefSeq gene 1929 2756 . + . ID=gene-HGK48_RS06995;Name=HGK48_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS06995 NZ_JAATTN010000142.1 Protein Homology CDS 1929 2756 . + 0 ID=cds-WP_002850167.1;Parent=gene-HGK48_RS06995;Dbxref=GenBank:WP_002850167.1;Name=WP_002850167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850167.1;locus_tag=HGK48_RS06995;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_002850167.1;transl_table=11 NZ_JAATTN010000142.1 RefSeq pseudogene 2746 4553 . + . ID=gene-HGK48_RS07000;Name=ftsH;end_range=4553,.;gbkey=Gene;gene=ftsH;gene_biotype=pseudogene;locus_tag=HGK48_RS07000;partial=true;pseudo=true NZ_JAATTN010000142.1 Protein Homology CDS 2746 4553 . + 0 ID=cds-HGK48_RS07000;Parent=gene-HGK48_RS07000;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;end_range=4553,.;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344509.1;locus_tag=HGK48_RS07000;partial=true;product=ATP-dependent zinc metalloprotease FtsH;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000143.1 1 4475 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000143.1 RefSeq region 1 4475 . + . ID=NZ_JAATTN010000143.1:1..4475;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000143.1 RefSeq pseudogene 1 260 . + . ID=gene-HGK48_RS07005;Name=HGK48_RS07005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS07005;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000143.1 Protein Homology CDS 1 260 . + 2 ID=cds-HGK48_RS07005;Parent=gene-HGK48_RS07005;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002788384.1;locus_tag=HGK48_RS07005;partial=true;product=carboxy-S-adenosyl-L-methionine synthase CmoA;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000143.1 RefSeq gene 338 1378 . + . ID=gene-HGK48_RS07010;Name=HGK48_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07010 NZ_JAATTN010000143.1 Protein Homology CDS 338 1378 . + 0 ID=cds-WP_024305207.1;Parent=gene-HGK48_RS07010;Dbxref=GenBank:WP_024305207.1;Name=WP_024305207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002836385.1;locus_tag=HGK48_RS07010;product=ABC transporter substrate-binding protein;protein_id=WP_024305207.1;transl_table=11 NZ_JAATTN010000143.1 RefSeq pseudogene 1389 2118 . + . ID=gene-HGK48_RS07015;Name=HGK48_RS07015;end_range=2118,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS07015;partial=true;pseudo=true NZ_JAATTN010000143.1 Protein Homology CDS 1389 2118 . + 0 ID=cds-HGK48_RS07015;Parent=gene-HGK48_RS07015;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002793291.1;locus_tag=HGK48_RS07015;partial=true;product=esterase-like activity of phytase family protein;pseudo=true;transl_table=11 NZ_JAATTN010000143.1 RefSeq gene 2281 3084 . + . ID=gene-HGK48_RS07020;Name=HGK48_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07020 NZ_JAATTN010000143.1 Protein Homology CDS 2281 3084 . + 0 ID=cds-WP_002849707.1;Parent=gene-HGK48_RS07020;Dbxref=GenBank:WP_002849707.1;Name=WP_002849707.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849707.1;locus_tag=HGK48_RS07020;product=alkaline phosphatase family protein;protein_id=WP_002849707.1;transl_table=11 NZ_JAATTN010000143.1 RefSeq gene 3081 3923 . + . ID=gene-HGK48_RS07025;Name=HGK48_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07025 NZ_JAATTN010000143.1 Protein Homology CDS 3081 3923 . + 0 ID=cds-WP_024305210.1;Parent=gene-HGK48_RS07025;Dbxref=GenBank:WP_024305210.1;Name=WP_024305210.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732082.1;locus_tag=HGK48_RS07025;product=ABC transporter permease;protein_id=WP_024305210.1;transl_table=11 NZ_JAATTN010000143.1 RefSeq gene 3920 4475 . + . ID=gene-HGK48_RS07030;Name=HGK48_RS07030;end_range=4475,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07030;partial=true NZ_JAATTN010000143.1 Protein Homology CDS 3920 4475 . + 0 ID=cds-WP_168236779.1;Parent=gene-HGK48_RS07030;Dbxref=GenBank:WP_168236779.1;Name=WP_168236779.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;end_range=4475,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849702.1;locus_tag=HGK48_RS07030;partial=true;product=ABC transporter permease;protein_id=WP_168236779.1;transl_table=11 ##sequence-region NZ_JAATTN010000144.1 1 4528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000144.1 RefSeq region 1 4528 . + . ID=NZ_JAATTN010000144.1:1..4528;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000144.1 RefSeq gene 1 139 . + . ID=gene-HGK48_RS07035;Name=HGK48_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07035;partial=true;start_range=.,1 NZ_JAATTN010000144.1 Protein Homology CDS 1 139 . + 1 ID=cds-WP_168236780.1;Parent=gene-HGK48_RS07035;Dbxref=GenBank:WP_168236780.1;Name=WP_168236780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848670.1;locus_tag=HGK48_RS07035;partial=true;product=4Fe-4S binding protein;protein_id=WP_168236780.1;start_range=.,1;transl_table=11 NZ_JAATTN010000144.1 RefSeq gene 152 805 . + . ID=gene-HGK48_RS07040;Name=HGK48_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07040 NZ_JAATTN010000144.1 Protein Homology CDS 152 805 . + 0 ID=cds-WP_002848671.1;Parent=gene-HGK48_RS07040;Dbxref=GenBank:WP_002848671.1;Name=WP_002848671.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848671.1;locus_tag=HGK48_RS07040;product=ATP-binding cassette domain-containing protein;protein_id=WP_002848671.1;transl_table=11 NZ_JAATTN010000144.1 RefSeq gene 802 1629 . + . ID=gene-HGK48_RS07045;Name=HGK48_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07045 NZ_JAATTN010000144.1 Protein Homology CDS 802 1629 . + 0 ID=cds-WP_024305276.1;Parent=gene-HGK48_RS07045;Dbxref=GenBank:WP_024305276.1;Name=WP_024305276.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009295293.1;locus_tag=HGK48_RS07045;product=ABC transporter permease;protein_id=WP_024305276.1;transl_table=11 NZ_JAATTN010000144.1 RefSeq gene 1626 2081 . + . ID=gene-HGK48_RS07050;Name=HGK48_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07050 NZ_JAATTN010000144.1 Protein Homology CDS 1626 2081 . + 0 ID=cds-WP_002848673.1;Parent=gene-HGK48_RS07050;Dbxref=GenBank:WP_002848673.1;Name=WP_002848673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017394.6;locus_tag=HGK48_RS07050;product=nitrous oxide reductase accessory protein NosL;protein_id=WP_002848673.1;transl_table=11 NZ_JAATTN010000144.1 RefSeq gene 2162 2542 . + . ID=gene-HGK48_RS07055;Name=HGK48_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07055 NZ_JAATTN010000144.1 GeneMarkS-2+ CDS 2162 2542 . + 0 ID=cds-WP_002848675.1;Parent=gene-HGK48_RS07055;Dbxref=GenBank:WP_002848675.1;Name=WP_002848675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07055;product=hypothetical protein;protein_id=WP_002848675.1;transl_table=11 NZ_JAATTN010000144.1 RefSeq gene 2632 3849 . - . ID=gene-HGK48_RS07060;Name=HGK48_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07060 NZ_JAATTN010000144.1 Protein Homology CDS 2632 3849 . - 0 ID=cds-WP_002848677.1;Parent=gene-HGK48_RS07060;Dbxref=GenBank:WP_002848677.1;Name=WP_002848677.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014567.6;locus_tag=HGK48_RS07060;product=histidine kinase dimerization/phospho-acceptor domain-containing protein;protein_id=WP_002848677.1;transl_table=11 NZ_JAATTN010000144.1 RefSeq gene 3854 4522 . - . ID=gene-HGK48_RS07065;Name=HGK48_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07065 NZ_JAATTN010000144.1 Protein Homology CDS 3854 4522 . - 0 ID=cds-WP_168236781.1;Parent=gene-HGK48_RS07065;Dbxref=GenBank:WP_168236781.1;Name=WP_168236781.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848678.1;locus_tag=HGK48_RS07065;product=response regulator;protein_id=WP_168236781.1;transl_table=11 ##sequence-region NZ_JAATTN010000145.1 1 4479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000145.1 RefSeq region 1 4479 . + . ID=NZ_JAATTN010000145.1:1..4479;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000145.1 RefSeq gene 1 187 . - . ID=gene-HGK48_RS07070;Name=HGK48_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07070;partial=true;start_range=.,1 NZ_JAATTN010000145.1 GeneMarkS-2+ CDS 1 187 . - 0 ID=cds-WP_168236782.1;Parent=gene-HGK48_RS07070;Dbxref=GenBank:WP_168236782.1;Name=WP_168236782.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07070;partial=true;product=hypothetical protein;protein_id=WP_168236782.1;start_range=.,1;transl_table=11 NZ_JAATTN010000145.1 RefSeq gene 184 594 . - . ID=gene-HGK48_RS07075;Name=HGK48_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07075 NZ_JAATTN010000145.1 GeneMarkS-2+ CDS 184 594 . - 0 ID=cds-WP_002850299.1;Parent=gene-HGK48_RS07075;Dbxref=GenBank:WP_002850299.1;Name=WP_002850299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07075;product=hypothetical protein;protein_id=WP_002850299.1;transl_table=11 NZ_JAATTN010000145.1 RefSeq gene 699 950 . + . ID=gene-HGK48_RS07080;Name=HGK48_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07080 NZ_JAATTN010000145.1 Protein Homology CDS 699 950 . + 0 ID=cds-WP_002850301.1;Parent=gene-HGK48_RS07080;Dbxref=GenBank:WP_002850301.1;Name=WP_002850301.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850301.1;locus_tag=HGK48_RS07080;product=helix-turn-helix domain-containing protein;protein_id=WP_002850301.1;transl_table=11 NZ_JAATTN010000145.1 RefSeq gene 1015 1839 . - . ID=gene-HGK48_RS07085;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=HGK48_RS07085 NZ_JAATTN010000145.1 Protein Homology CDS 1015 1839 . - 0 ID=cds-WP_011732201.1;Parent=gene-HGK48_RS07085;Dbxref=GenBank:WP_011732201.1;Name=WP_011732201.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732201.1;locus_tag=HGK48_RS07085;product=enoyl-ACP reductase FabI;protein_id=WP_011732201.1;transl_table=11 NZ_JAATTN010000145.1 RefSeq gene 1857 2525 . - . ID=gene-HGK48_RS07090;Name=HGK48_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07090 NZ_JAATTN010000145.1 Protein Homology CDS 1857 2525 . - 0 ID=cds-WP_002850305.1;Parent=gene-HGK48_RS07090;Dbxref=GenBank:WP_002850305.1;Name=WP_002850305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850305.1;locus_tag=HGK48_RS07090;product=triose-phosphate isomerase;protein_id=WP_002850305.1;transl_table=11 NZ_JAATTN010000145.1 RefSeq gene 2640 3845 . - . ID=gene-HGK48_RS07095;Name=HGK48_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07095 NZ_JAATTN010000145.1 Protein Homology CDS 2640 3845 . - 0 ID=cds-WP_002850307.1;Parent=gene-HGK48_RS07095;Dbxref=GenBank:WP_002850307.1;Name=WP_002850307.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732202.1;locus_tag=HGK48_RS07095;product=phosphoglycerate kinase;protein_id=WP_002850307.1;transl_table=11 NZ_JAATTN010000145.1 RefSeq gene 3847 4479 . - . ID=gene-HGK48_RS07100;Name=HGK48_RS07100;end_range=4479,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07100;partial=true NZ_JAATTN010000145.1 Protein Homology CDS 3847 4479 . - 0 ID=cds-WP_168236783.1;Parent=gene-HGK48_RS07100;Dbxref=GenBank:WP_168236783.1;Name=WP_168236783.1;Ontology_term=GO:0006006,GO:0006096,GO:0016620,GO:0030554;end_range=4479,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,adenyl nucleotide binding|0030554||IEA;go_process=glucose metabolic process|0006006||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002865446.1;locus_tag=HGK48_RS07100;partial=true;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_168236783.1;transl_table=11 ##sequence-region NZ_JAATTN010000146.1 1 4471 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000146.1 RefSeq region 1 4471 . + . ID=NZ_JAATTN010000146.1:1..4471;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000146.1 RefSeq gene 1 470 . - . ID=gene-HGK48_RS07105;Name=HGK48_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07105;partial=true;start_range=.,1 NZ_JAATTN010000146.1 Protein Homology CDS 1 470 . - 0 ID=cds-WP_168236784.1;Parent=gene-HGK48_RS07105;Dbxref=GenBank:WP_168236784.1;Name=WP_168236784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848076.1;locus_tag=HGK48_RS07105;partial=true;product=thiamine-phosphate kinase;protein_id=WP_168236784.1;start_range=.,1;transl_table=11 NZ_JAATTN010000146.1 RefSeq gene 449 907 . - . ID=gene-HGK48_RS07110;Name=HGK48_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07110 NZ_JAATTN010000146.1 GeneMarkS-2+ CDS 449 907 . - 0 ID=cds-WP_167497326.1;Parent=gene-HGK48_RS07110;Dbxref=GenBank:WP_167497326.1;Name=WP_167497326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07110;product=type 1 glutamine amidotransferase family protein;protein_id=WP_167497326.1;transl_table=11 NZ_JAATTN010000146.1 RefSeq gene 1040 2146 . + . ID=gene-HGK48_RS07115;Name=HGK48_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07115 NZ_JAATTN010000146.1 Protein Homology CDS 1040 2146 . + 0 ID=cds-WP_011731691.1;Parent=gene-HGK48_RS07115;Dbxref=GenBank:WP_011731691.1;Name=WP_011731691.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: protein motif:HMM:NF012382.6;locus_tag=HGK48_RS07115;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_011731691.1;transl_table=11 NZ_JAATTN010000146.1 RefSeq gene 2127 2741 . + . ID=gene-HGK48_RS07120;Name=HGK48_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07120 NZ_JAATTN010000146.1 Protein Homology CDS 2127 2741 . + 0 ID=cds-WP_002848073.1;Parent=gene-HGK48_RS07120;Dbxref=GenBank:WP_002848073.1;Name=WP_002848073.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016209.6;locus_tag=HGK48_RS07120;product=pimeloyl-ACP methyl esterase BioG family protein;protein_id=WP_002848073.1;transl_table=11 NZ_JAATTN010000146.1 RefSeq gene 2731 3420 . + . ID=gene-HGK48_RS07125;Name=HGK48_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07125 NZ_JAATTN010000146.1 GeneMarkS-2+ CDS 2731 3420 . + 0 ID=cds-WP_002848070.1;Parent=gene-HGK48_RS07125;Dbxref=GenBank:WP_002848070.1;Name=WP_002848070.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07125;product=methyltransferase domain-containing protein;protein_id=WP_002848070.1;transl_table=11 NZ_JAATTN010000146.1 RefSeq gene 3417 4028 . + . ID=gene-HGK48_RS07130;Name=HGK48_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07130 NZ_JAATTN010000146.1 Protein Homology CDS 3417 4028 . + 0 ID=cds-WP_002848068.1;Parent=gene-HGK48_RS07130;Dbxref=GenBank:WP_002848068.1;Name=WP_002848068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848068.1;locus_tag=HGK48_RS07130;product=dethiobiotin synthase;protein_id=WP_002848068.1;transl_table=11 NZ_JAATTN010000146.1 RefSeq gene 4025 4405 . + . ID=gene-HGK48_RS07135;Name=HGK48_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07135 NZ_JAATTN010000146.1 Protein Homology CDS 4025 4405 . + 0 ID=cds-WP_002848066.1;Parent=gene-HGK48_RS07135;Dbxref=GenBank:WP_002848066.1;Name=WP_002848066.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848066.1;locus_tag=HGK48_RS07135;product=HIT domain-containing protein;protein_id=WP_002848066.1;transl_table=11 ##sequence-region NZ_JAATTN010000147.1 1 4458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000147.1 RefSeq region 1 4458 . + . ID=NZ_JAATTN010000147.1:1..4458;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000147.1 RefSeq gene 1 2394 . + . ID=gene-HGK48_RS07140;Name=HGK48_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07140;partial=true;start_range=.,1 NZ_JAATTN010000147.1 Protein Homology CDS 1 2394 . + 0 ID=cds-WP_149897133.1;Parent=gene-HGK48_RS07140;Dbxref=GenBank:WP_149897133.1;Name=WP_149897133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731827.1;locus_tag=HGK48_RS07140;partial=true;product=beta strand repeat-containing protein;protein_id=WP_149897133.1;start_range=.,1;transl_table=11 NZ_JAATTN010000147.1 RefSeq gene 2677 4251 . - . ID=gene-HGK48_RS07145;Name=HGK48_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07145 NZ_JAATTN010000147.1 Protein Homology CDS 2677 4251 . - 0 ID=cds-WP_002848713.1;Parent=gene-HGK48_RS07145;Dbxref=GenBank:WP_002848713.1;Name=WP_002848713.1;Ontology_term=GO:0016310,GO:0004674,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF019421.6;locus_tag=HGK48_RS07145;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_002848713.1;transl_table=11 ##sequence-region NZ_JAATTN010000148.1 1 4440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000148.1 RefSeq region 1 4440 . + . ID=NZ_JAATTN010000148.1:1..4440;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000148.1 RefSeq gene 1 1257 . + . ID=gene-HGK48_RS07150;Name=HGK48_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07150;partial=true;start_range=.,1 NZ_JAATTN010000148.1 Protein Homology CDS 1 1257 . + 0 ID=cds-WP_168236785.1;Parent=gene-HGK48_RS07150;Dbxref=GenBank:WP_168236785.1;Name=WP_168236785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732103.1;locus_tag=HGK48_RS07150;partial=true;product=leucyl aminopeptidase;protein_id=WP_168236785.1;start_range=.,1;transl_table=11 NZ_JAATTN010000148.1 RefSeq gene 1257 2360 . + . ID=gene-HGK48_RS07155;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=HGK48_RS07155 NZ_JAATTN010000148.1 Protein Homology CDS 1257 2360 . + 0 ID=cds-WP_002849817.1;Parent=gene-HGK48_RS07155;Dbxref=GenBank:WP_002849817.1;Name=WP_002849817.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344328.1;locus_tag=HGK48_RS07155;product=redox-regulated ATPase YchF;protein_id=WP_002849817.1;transl_table=11 NZ_JAATTN010000148.1 RefSeq gene 2572 3300 . + . ID=gene-HGK48_RS07160;Name=HGK48_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07160 NZ_JAATTN010000148.1 Protein Homology CDS 2572 3300 . + 0 ID=cds-WP_011732102.1;Parent=gene-HGK48_RS07160;Dbxref=GenBank:WP_011732102.1;Name=WP_011732102.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004316361.1;locus_tag=HGK48_RS07160;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_011732102.1;transl_table=11 NZ_JAATTN010000148.1 RefSeq gene 3316 4110 . + . ID=gene-HGK48_RS07165;Name=HGK48_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07165 NZ_JAATTN010000148.1 Protein Homology CDS 3316 4110 . + 0 ID=cds-WP_024305174.1;Parent=gene-HGK48_RS07165;Dbxref=GenBank:WP_024305174.1;Name=WP_024305174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732101.1;locus_tag=HGK48_RS07165;product=transporter substrate-binding domain-containing protein;protein_id=WP_024305174.1;transl_table=11 NZ_JAATTN010000148.1 RefSeq gene 4110 4440 . + . ID=gene-HGK48_RS07170;Name=HGK48_RS07170;end_range=4440,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07170;partial=true NZ_JAATTN010000148.1 Protein Homology CDS 4110 4440 . + 0 ID=cds-WP_240944824.1;Parent=gene-HGK48_RS07170;Dbxref=GenBank:WP_240944824.1;Name=WP_240944824.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0022857,GO:0016020;end_range=4440,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: protein motif:HMM:TIGR01726.1;locus_tag=HGK48_RS07170;partial=true;product=ABC transporter permease subunit;protein_id=WP_240944824.1;transl_table=11 ##sequence-region NZ_JAATTN010000149.1 1 4407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000149.1 RefSeq region 1 4407 . + . ID=NZ_JAATTN010000149.1:1..4407;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000149.1 RefSeq gene 1 187 . - . ID=gene-HGK48_RS07175;Name=HGK48_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07175;partial=true;start_range=.,1 NZ_JAATTN010000149.1 Protein Homology CDS 1 187 . - 0 ID=cds-WP_240944825.1;Parent=gene-HGK48_RS07175;Dbxref=GenBank:WP_240944825.1;Name=WP_240944825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847808.1;locus_tag=HGK48_RS07175;partial=true;product=RidA family protein;protein_id=WP_240944825.1;start_range=.,1;transl_table=11 NZ_JAATTN010000149.1 RefSeq gene 331 1314 . + . ID=gene-HGK48_RS07180;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=HGK48_RS07180 NZ_JAATTN010000149.1 Protein Homology CDS 331 1314 . + 0 ID=cds-WP_002847810.1;Parent=gene-HGK48_RS07180;Dbxref=GenBank:WP_002847810.1;Name=WP_002847810.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991656.1;locus_tag=HGK48_RS07180;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_002847810.1;transl_table=11 NZ_JAATTN010000149.1 RefSeq gene 1346 2431 . - . ID=gene-HGK48_RS07185;Name=HGK48_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07185 NZ_JAATTN010000149.1 Protein Homology CDS 1346 2431 . - 0 ID=cds-WP_002847812.1;Parent=gene-HGK48_RS07185;Dbxref=GenBank:WP_002847812.1;Name=WP_002847812.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: protein motif:HMM:NF013862.7;locus_tag=HGK48_RS07185;product=patatin-like phospholipase family protein;protein_id=WP_002847812.1;transl_table=11 NZ_JAATTN010000149.1 RefSeq gene 2418 3611 . - . ID=gene-HGK48_RS07190;Name=HGK48_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07190 NZ_JAATTN010000149.1 Protein Homology CDS 2418 3611 . - 0 ID=cds-WP_002847815.1;Parent=gene-HGK48_RS07190;Dbxref=GenBank:WP_002847815.1;Name=WP_002847815.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847815.1;locus_tag=HGK48_RS07190;product=replication-associated recombination protein A;protein_id=WP_002847815.1;transl_table=11 NZ_JAATTN010000149.1 RefSeq gene 3613 4407 . - . ID=gene-HGK48_RS07195;Name=HGK48_RS07195;end_range=4407,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07195;partial=true NZ_JAATTN010000149.1 Protein Homology CDS 3613 4407 . - 0 ID=cds-WP_168236786.1;Parent=gene-HGK48_RS07195;Dbxref=GenBank:WP_168236786.1;Name=WP_168236786.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=4407,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732342.1;locus_tag=HGK48_RS07195;partial=true;product=DMT family transporter;protein_id=WP_168236786.1;transl_table=11 ##sequence-region NZ_JAATTN010000014.1 1 15502 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000014.1 RefSeq region 1 15502 . + . ID=NZ_JAATTN010000014.1:1..15502;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000014.1 RefSeq gene 1 624 . - . ID=gene-HGK48_RS01465;Name=HGK48_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01465;partial=true;start_range=.,1 NZ_JAATTN010000014.1 GeneMarkS-2+ CDS 1 624 . - 0 ID=cds-WP_168236644.1;Parent=gene-HGK48_RS01465;Dbxref=GenBank:WP_168236644.1;Name=WP_168236644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01465;partial=true;product=hypothetical protein;protein_id=WP_168236644.1;start_range=.,1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 718 1701 . - . ID=gene-HGK48_RS01470;Name=HGK48_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01470 NZ_JAATTN010000014.1 Protein Homology CDS 718 1701 . - 0 ID=cds-WP_002850654.1;Parent=gene-HGK48_RS01470;Dbxref=GenBank:WP_002850654.1;Name=WP_002850654.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850654.1;locus_tag=HGK48_RS01470;product=radical SAM/SPASM domain-containing protein;protein_id=WP_002850654.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 1728 2180 . - . ID=gene-HGK48_RS01475;Name=HGK48_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01475 NZ_JAATTN010000014.1 Protein Homology CDS 1728 2180 . - 0 ID=cds-WP_002850652.1;Parent=gene-HGK48_RS01475;Dbxref=GenBank:WP_002850652.1;Name=WP_002850652.1;Ontology_term=GO:0046677,GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008350145.1;locus_tag=HGK48_RS01475;product=acyltransferase;protein_id=WP_002850652.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 2260 3192 . - . ID=gene-HGK48_RS11430;Name=HGK48_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11430 NZ_JAATTN010000014.1 Protein Homology CDS 2260 3192 . - 0 ID=cds-WP_166429464.1;Parent=gene-HGK48_RS11430;Dbxref=GenBank:WP_166429464.1;Name=WP_166429464.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012760.6;locus_tag=HGK48_RS11430;product=formyltransferase family protein;protein_id=WP_166429464.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 3177 4244 . - . ID=gene-HGK48_RS01485;Name=HGK48_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01485 NZ_JAATTN010000014.1 Protein Homology CDS 3177 4244 . - 0 ID=cds-WP_002850648.1;Parent=gene-HGK48_RS01485;Dbxref=GenBank:WP_002850648.1;Name=WP_002850648.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850648.1;locus_tag=HGK48_RS01485;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_002850648.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 4247 5071 . - . ID=gene-HGK48_RS01490;Name=HGK48_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01490 NZ_JAATTN010000014.1 Protein Homology CDS 4247 5071 . - 0 ID=cds-WP_046037270.1;Parent=gene-HGK48_RS01490;Dbxref=GenBank:WP_046037270.1;Name=WP_046037270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020073.6;locus_tag=HGK48_RS01490;product=methyltransferase domain-containing protein;protein_id=WP_046037270.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 5101 5517 . - . ID=gene-HGK48_RS01495;Name=HGK48_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01495 NZ_JAATTN010000014.1 GeneMarkS-2+ CDS 5101 5517 . - 0 ID=cds-WP_035169302.1;Parent=gene-HGK48_RS01495;Dbxref=GenBank:WP_035169302.1;Name=WP_035169302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01495;product=hypothetical protein;protein_id=WP_035169302.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 5526 5969 . - . ID=gene-HGK48_RS01500;Name=HGK48_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01500 NZ_JAATTN010000014.1 Protein Homology CDS 5526 5969 . - 0 ID=cds-WP_002850646.1;Parent=gene-HGK48_RS01500;Dbxref=GenBank:WP_002850646.1;Name=WP_002850646.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04366.1;locus_tag=HGK48_RS01500;product=WbuC family cupin fold metalloprotein;protein_id=WP_002850646.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 6025 6984 . - . ID=gene-HGK48_RS01505;Name=HGK48_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01505 NZ_JAATTN010000014.1 Protein Homology CDS 6025 6984 . - 0 ID=cds-WP_002850644.1;Parent=gene-HGK48_RS01505;Dbxref=GenBank:WP_002850644.1;Name=WP_002850644.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850644.1;locus_tag=HGK48_RS01505;product=radical SAM/SPASM domain-containing protein;protein_id=WP_002850644.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 6971 7303 . - . ID=gene-HGK48_RS11350;Name=HGK48_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11350 NZ_JAATTN010000014.1 Protein Homology CDS 6971 7303 . - 0 ID=cds-WP_080582783.1;Parent=gene-HGK48_RS11350;Dbxref=GenBank:WP_080582783.1;Name=WP_080582783.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.6;locus_tag=HGK48_RS11350;product=SDR family oxidoreductase;protein_id=WP_080582783.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 7314 7685 . - . ID=gene-HGK48_RS11355;Name=HGK48_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11355 NZ_JAATTN010000014.1 Protein Homology CDS 7314 7685 . - 0 ID=cds-WP_050981968.1;Parent=gene-HGK48_RS11355;Dbxref=GenBank:WP_050981968.1;Name=WP_050981968.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.6;locus_tag=HGK48_RS11355;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_050981968.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 7685 8746 . - . ID=gene-HGK48_RS01520;Name=HGK48_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01520 NZ_JAATTN010000014.1 Protein Homology CDS 7685 8746 . - 0 ID=cds-WP_024305316.1;Parent=gene-HGK48_RS01520;Dbxref=GenBank:WP_024305316.1;Name=WP_024305316.1;Ontology_term=GO:0003824,GO:0051539;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006655331.1;locus_tag=HGK48_RS01520;product=radical SAM protein;protein_id=WP_024305316.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 8800 9459 . - . ID=gene-HGK48_RS01525;Name=HGK48_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01525 NZ_JAATTN010000014.1 Protein Homology CDS 8800 9459 . - 0 ID=cds-WP_011732257.1;Parent=gene-HGK48_RS01525;Dbxref=GenBank:WP_011732257.1;Name=WP_011732257.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850642.1;locus_tag=HGK48_RS01525;product=class I SAM-dependent methyltransferase;protein_id=WP_011732257.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 9456 10322 . - . ID=gene-HGK48_RS01530;Name=HGK48_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01530 NZ_JAATTN010000014.1 Protein Homology CDS 9456 10322 . - 0 ID=cds-WP_002850641.1;Parent=gene-HGK48_RS01530;Dbxref=GenBank:WP_002850641.1;Name=WP_002850641.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732256.1;locus_tag=HGK48_RS01530;product=transketolase family protein;protein_id=WP_002850641.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 10319 11080 . - . ID=gene-HGK48_RS01535;Name=HGK48_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01535 NZ_JAATTN010000014.1 Protein Homology CDS 10319 11080 . - 0 ID=cds-WP_024305317.1;Parent=gene-HGK48_RS01535;Dbxref=GenBank:WP_024305317.1;Name=WP_024305317.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006656793.1;locus_tag=HGK48_RS01535;product=transketolase;protein_id=WP_024305317.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 11089 12183 . - . ID=gene-HGK48_RS01540;Name=HGK48_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01540 NZ_JAATTN010000014.1 Protein Homology CDS 11089 12183 . - 0 ID=cds-WP_024305318.1;Parent=gene-HGK48_RS01540;Dbxref=GenBank:WP_024305318.1;Name=WP_024305318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956896.1;locus_tag=HGK48_RS01540;product=radical SAM/SPASM domain-containing protein;protein_id=WP_024305318.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 12214 13284 . - . ID=gene-HGK48_RS01545;Name=HGK48_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01545 NZ_JAATTN010000014.1 Protein Homology CDS 12214 13284 . - 0 ID=cds-WP_025370394.1;Parent=gene-HGK48_RS01545;Dbxref=GenBank:WP_025370394.1;Name=WP_025370394.1;Ontology_term=GO:0003824,GO:0051539;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732253.1;locus_tag=HGK48_RS01545;product=radical SAM protein;protein_id=WP_025370394.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq gene 13281 14213 . - . ID=gene-HGK48_RS01550;Name=HGK48_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01550 NZ_JAATTN010000014.1 Protein Homology CDS 13281 14213 . - 0 ID=cds-WP_002850638.1;Parent=gene-HGK48_RS01550;Dbxref=GenBank:WP_002850638.1;Name=WP_002850638.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850638.1;locus_tag=HGK48_RS01550;product=radical SAM protein;protein_id=WP_002850638.1;transl_table=11 NZ_JAATTN010000014.1 RefSeq pseudogene 14201 15502 . - . ID=gene-HGK48_RS01555;Name=HGK48_RS01555;end_range=15502,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS01555;partial=true;pseudo=true NZ_JAATTN010000014.1 GeneMarkS-2+ CDS 14201 15502 . - 0 ID=cds-HGK48_RS01555;Parent=gene-HGK48_RS01555;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=15502,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01555;partial=true;product=glycosyltransferase family 1 protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000150.1 1 4376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000150.1 RefSeq region 1 4376 . + . ID=NZ_JAATTN010000150.1:1..4376;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000150.1 RefSeq gene 580 1746 . + . ID=gene-HGK48_RS07200;Name=HGK48_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07200 NZ_JAATTN010000150.1 Protein Homology CDS 580 1746 . + 0 ID=cds-WP_002849103.1;Parent=gene-HGK48_RS07200;Dbxref=GenBank:WP_002849103.1;Name=WP_002849103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849103.1;locus_tag=HGK48_RS07200;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_002849103.1;transl_table=11 NZ_JAATTN010000150.1 RefSeq gene 1755 3116 . + . ID=gene-HGK48_RS07205;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=HGK48_RS07205 NZ_JAATTN010000150.1 Protein Homology CDS 1755 3116 . + 0 ID=cds-WP_002849105.1;Parent=gene-HGK48_RS07205;Dbxref=GenBank:WP_002849105.1;Name=WP_002849105.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849105.1;locus_tag=HGK48_RS07205;product=magnesium transporter;protein_id=WP_002849105.1;transl_table=11 NZ_JAATTN010000150.1 RefSeq gene 3101 3685 . + . ID=gene-HGK48_RS07210;Name=HGK48_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07210 NZ_JAATTN010000150.1 Protein Homology CDS 3101 3685 . + 0 ID=cds-WP_002849107.1;Parent=gene-HGK48_RS07210;Dbxref=GenBank:WP_002849107.1;Name=WP_002849107.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849107.1;locus_tag=HGK48_RS07210;product=NUDIX domain-containing protein;protein_id=WP_002849107.1;transl_table=11 NZ_JAATTN010000150.1 RefSeq pseudogene 3693 4376 . - . ID=gene-HGK48_RS07215;Name=HGK48_RS07215;end_range=4376,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS07215;partial=true;pseudo=true NZ_JAATTN010000150.1 GeneMarkS-2+ CDS 3693 4376 . - 0 ID=cds-HGK48_RS07215;Parent=gene-HGK48_RS07215;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4376,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07215;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000151.1 1 4375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000151.1 RefSeq region 1 4375 . + . ID=NZ_JAATTN010000151.1:1..4375;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000151.1 RefSeq gene 1 647 . + . ID=gene-HGK48_RS07220;Name=HGK48_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07220;partial=true;start_range=.,1 NZ_JAATTN010000151.1 Protein Homology CDS 1 647 . + 2 ID=cds-WP_240944826.1;Parent=gene-HGK48_RS07220;Dbxref=GenBank:WP_240944826.1;Name=WP_240944826.1;Ontology_term=GO:0070981,GO:0004066;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: protein motif:HMM:NF012936.6;locus_tag=HGK48_RS07220;partial=true;product=asparagine synthase-related protein;protein_id=WP_240944826.1;start_range=.,1;transl_table=11 NZ_JAATTN010000151.1 RefSeq gene 644 1750 . + . ID=gene-HGK48_RS07225;Name=HGK48_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07225 NZ_JAATTN010000151.1 Protein Homology CDS 644 1750 . + 0 ID=cds-WP_025370396.1;Parent=gene-HGK48_RS07225;Dbxref=GenBank:WP_025370396.1;Name=WP_025370396.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: protein motif:HMM:NF012744.6;locus_tag=HGK48_RS07225;product=glycosyltransferase;protein_id=WP_025370396.1;transl_table=11 NZ_JAATTN010000151.1 RefSeq gene 1747 3201 . + . ID=gene-HGK48_RS07230;Name=HGK48_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07230 NZ_JAATTN010000151.1 GeneMarkS-2+ CDS 1747 3201 . + 0 ID=cds-WP_025370397.1;Parent=gene-HGK48_RS07230;Dbxref=GenBank:WP_025370397.1;Name=WP_025370397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07230;product=hypothetical protein;protein_id=WP_025370397.1;transl_table=11 NZ_JAATTN010000151.1 RefSeq gene 3201 4375 . + . ID=gene-HGK48_RS07235;Name=HGK48_RS07235;end_range=4375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07235;partial=true NZ_JAATTN010000151.1 GeneMarkS-2+ CDS 3201 4375 . + 0 ID=cds-WP_168236787.1;Parent=gene-HGK48_RS07235;Dbxref=GenBank:WP_168236787.1;Name=WP_168236787.1;end_range=4375,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07235;partial=true;product=hypothetical protein;protein_id=WP_168236787.1;transl_table=11 ##sequence-region NZ_JAATTN010000152.1 1 4354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000152.1 RefSeq region 1 4354 . + . ID=NZ_JAATTN010000152.1:1..4354;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000152.1 RefSeq gene 54 341 . - . ID=gene-HGK48_RS07240;Name=HGK48_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07240 NZ_JAATTN010000152.1 Protein Homology CDS 54 341 . - 0 ID=cds-WP_025370391.1;Parent=gene-HGK48_RS07240;Dbxref=GenBank:WP_025370391.1;Name=WP_025370391.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: protein motif:HMM:NF019846.6;locus_tag=HGK48_RS07240;product=methyltransferase domain-containing protein;protein_id=WP_025370391.1;transl_table=11 NZ_JAATTN010000152.1 RefSeq pseudogene 675 1469 . - . ID=gene-HGK48_RS07245;Name=HGK48_RS07245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS07245;partial=true;pseudo=true;start_range=.,675 NZ_JAATTN010000152.1 Protein Homology CDS 675 1469 . - 0 ID=cds-HGK48_RS07245;Parent=gene-HGK48_RS07245;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343796.1;locus_tag=HGK48_RS07245;partial=true;product=cytochrome-c peroxidase;pseudo=true;start_range=.,675;transl_table=11 NZ_JAATTN010000152.1 RefSeq gene 1878 2432 . - . ID=gene-HGK48_RS07250;Name=fdh3B;gbkey=Gene;gene=fdh3B;gene_biotype=protein_coding;locus_tag=HGK48_RS07250 NZ_JAATTN010000152.1 Protein Homology CDS 1878 2432 . - 0 ID=cds-WP_002850557.1;Parent=gene-HGK48_RS07250;Dbxref=GenBank:WP_002850557.1;Name=WP_002850557.1;Ontology_term=GO:0009055;gbkey=CDS;gene=fdh3B;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850557.1;locus_tag=HGK48_RS07250;product=formate dehydrogenase FDH3 subunit beta;protein_id=WP_002850557.1;transl_table=11 NZ_JAATTN010000152.1 RefSeq gene 2447 4354 . - . ID=gene-HGK48_RS07255;Name=HGK48_RS07255;end_range=4354,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07255;partial=true NZ_JAATTN010000152.1 Protein Homology CDS 2447 4354 . - 0 ID=cds-WP_168236788.1;Parent=gene-HGK48_RS07255;Dbxref=GenBank:WP_168236788.1;Name=WP_168236788.1;end_range=4354,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850558.1;locus_tag=HGK48_RS07255;partial=true;product=formate dehydrogenase subunit alpha;protein_id=WP_168236788.1;transl_table=11 ##sequence-region NZ_JAATTN010000153.1 1 4349 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000153.1 RefSeq region 1 4349 . + . ID=NZ_JAATTN010000153.1:1..4349;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000153.1 RefSeq gene 80 1585 . + . ID=gene-HGK48_RS07260;Name=HGK48_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07260 NZ_JAATTN010000153.1 Protein Homology CDS 80 1585 . + 0 ID=cds-WP_011732032.1;Parent=gene-HGK48_RS07260;Dbxref=GenBank:WP_011732032.1;Name=WP_011732032.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732032.1;locus_tag=HGK48_RS07260;product=type I restriction-modification system subunit M;protein_id=WP_011732032.1;transl_table=11 NZ_JAATTN010000153.1 RefSeq gene 1608 1823 . + . ID=gene-HGK48_RS07265;Name=HGK48_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07265 NZ_JAATTN010000153.1 GeneMarkS-2+ CDS 1608 1823 . + 0 ID=cds-WP_002849539.1;Parent=gene-HGK48_RS07265;Dbxref=GenBank:WP_002849539.1;Name=WP_002849539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07265;product=hypothetical protein;protein_id=WP_002849539.1;transl_table=11 NZ_JAATTN010000153.1 RefSeq gene 1813 2826 . + . ID=gene-HGK48_RS11245;Name=HGK48_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11245 NZ_JAATTN010000153.1 Protein Homology CDS 1813 2826 . + 0 ID=cds-WP_002849538.1;Parent=gene-HGK48_RS11245;Dbxref=GenBank:WP_002849538.1;Name=WP_002849538.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.6;locus_tag=HGK48_RS11245;product=restriction endonuclease subunit S;protein_id=WP_002849538.1;transl_table=11 NZ_JAATTN010000153.1 RefSeq gene 2827 2988 . + . ID=gene-HGK48_RS11250;Name=HGK48_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11250 NZ_JAATTN010000153.1 Protein Homology CDS 2827 2988 . + 0 ID=cds-WP_080648002.1;Parent=gene-HGK48_RS11250;Dbxref=GenBank:WP_080648002.1;Name=WP_080648002.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.6;locus_tag=HGK48_RS11250;product=restriction endonuclease subunit S;protein_id=WP_080648002.1;transl_table=11 NZ_JAATTN010000153.1 RefSeq gene 2985 3539 . + . ID=gene-HGK48_RS07280;Name=HGK48_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07280 NZ_JAATTN010000153.1 GeneMarkS-2+ CDS 2985 3539 . + 0 ID=cds-WP_024305237.1;Parent=gene-HGK48_RS07280;Dbxref=GenBank:WP_024305237.1;Name=WP_024305237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07280;product=hypothetical protein;protein_id=WP_024305237.1;transl_table=11 NZ_JAATTN010000153.1 RefSeq gene 3539 4349 . + . ID=gene-HGK48_RS07285;Name=HGK48_RS07285;end_range=4349,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07285;partial=true NZ_JAATTN010000153.1 GeneMarkS-2+ CDS 3539 4349 . + 0 ID=cds-WP_168236789.1;Parent=gene-HGK48_RS07285;Dbxref=GenBank:WP_168236789.1;Name=WP_168236789.1;end_range=4349,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07285;partial=true;product=hypothetical protein;protein_id=WP_168236789.1;transl_table=11 ##sequence-region NZ_JAATTN010000154.1 1 4343 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000154.1 RefSeq region 1 4343 . + . ID=NZ_JAATTN010000154.1:1..4343;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000154.1 RefSeq gene 1 588 . + . ID=gene-HGK48_RS07290;Name=HGK48_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07290;partial=true;start_range=.,1 NZ_JAATTN010000154.1 Protein Homology CDS 1 588 . + 0 ID=cds-WP_168236790.1;Parent=gene-HGK48_RS07290;Dbxref=GenBank:WP_168236790.1;Name=WP_168236790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732062.1;locus_tag=HGK48_RS07290;partial=true;product=chemotaxis protein;protein_id=WP_168236790.1;start_range=.,1;transl_table=11 NZ_JAATTN010000154.1 RefSeq gene 585 1841 . + . ID=gene-HGK48_RS07295;Name=HGK48_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07295 NZ_JAATTN010000154.1 Protein Homology CDS 585 1841 . + 0 ID=cds-WP_002849617.1;Parent=gene-HGK48_RS07295;Dbxref=GenBank:WP_002849617.1;Name=WP_002849617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849617.1;locus_tag=HGK48_RS07295;product=peptidase U32 family protein;protein_id=WP_002849617.1;transl_table=11 NZ_JAATTN010000154.1 RefSeq gene 1982 2479 . + . ID=gene-HGK48_RS07300;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=HGK48_RS07300 NZ_JAATTN010000154.1 Protein Homology CDS 1982 2479 . + 0 ID=cds-WP_011732061.1;Parent=gene-HGK48_RS07300;Dbxref=GenBank:WP_011732061.1;Name=WP_011732061.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732061.1;locus_tag=HGK48_RS07300;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_011732061.1;transl_table=11 NZ_JAATTN010000154.1 RefSeq gene 2491 2961 . + . ID=gene-HGK48_RS07305;Name=HGK48_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07305 NZ_JAATTN010000154.1 Protein Homology CDS 2491 2961 . + 0 ID=cds-WP_011732060.1;Parent=gene-HGK48_RS07305;Dbxref=GenBank:WP_011732060.1;Name=WP_011732060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732060.1;locus_tag=HGK48_RS07305;product=DUF3972 domain-containing protein;protein_id=WP_011732060.1;transl_table=11 NZ_JAATTN010000154.1 RefSeq gene 3008 3865 . + . ID=gene-HGK48_RS07310;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=HGK48_RS07310 NZ_JAATTN010000154.1 Protein Homology CDS 3008 3865 . + 0 ID=cds-WP_002849611.1;Parent=gene-HGK48_RS07310;Dbxref=GenBank:WP_002849611.1;Name=WP_002849611.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849611.1;locus_tag=HGK48_RS07310;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002849611.1;transl_table=11 NZ_JAATTN010000154.1 RefSeq gene 3862 4343 . + . ID=gene-HGK48_RS07315;Name=HGK48_RS07315;end_range=4343,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07315;partial=true NZ_JAATTN010000154.1 Protein Homology CDS 3862 4343 . + 0 ID=cds-WP_168236791.1;Parent=gene-HGK48_RS07315;Dbxref=GenBank:WP_168236791.1;Name=WP_168236791.1;Ontology_term=GO:0046872;end_range=4343,.;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732059.1;locus_tag=HGK48_RS07315;partial=true;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_168236791.1;transl_table=11 ##sequence-region NZ_JAATTN010000155.1 1 4311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000155.1 RefSeq region 1 4311 . + . ID=NZ_JAATTN010000155.1:1..4311;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000155.1 RefSeq gene 1 517 . + . ID=gene-HGK48_RS07320;Name=HGK48_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07320;partial=true;start_range=.,1 NZ_JAATTN010000155.1 Protein Homology CDS 1 517 . + 1 ID=cds-WP_168236792.1;Parent=gene-HGK48_RS07320;Dbxref=GenBank:WP_168236792.1;Name=WP_168236792.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849195.1;locus_tag=HGK48_RS07320;partial=true;product=PDZ domain-containing protein;protein_id=WP_168236792.1;start_range=.,1;transl_table=11 NZ_JAATTN010000155.1 RefSeq gene 604 1278 . + . ID=gene-HGK48_RS07325;Name=HGK48_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07325 NZ_JAATTN010000155.1 Protein Homology CDS 604 1278 . + 0 ID=cds-WP_002849193.1;Parent=gene-HGK48_RS07325;Dbxref=GenBank:WP_002849193.1;Name=WP_002849193.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012661490.1;locus_tag=HGK48_RS07325;product=response regulator transcription factor;protein_id=WP_002849193.1;transl_table=11 NZ_JAATTN010000155.1 RefSeq gene 1275 2507 . + . ID=gene-HGK48_RS07330;Name=HGK48_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07330 NZ_JAATTN010000155.1 Protein Homology CDS 1275 2507 . + 0 ID=cds-WP_011731945.1;Parent=gene-HGK48_RS07330;Dbxref=GenBank:WP_011731945.1;Name=WP_011731945.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731945.1;locus_tag=HGK48_RS07330;product=ArsS family sensor histidine kinase;protein_id=WP_011731945.1;transl_table=11 NZ_JAATTN010000155.1 RefSeq gene 2514 3773 . - . ID=gene-HGK48_RS07335;Name=HGK48_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07335 NZ_JAATTN010000155.1 Protein Homology CDS 2514 3773 . - 0 ID=cds-WP_011731944.1;Parent=gene-HGK48_RS07335;Dbxref=GenBank:WP_011731944.1;Name=WP_011731944.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: protein motif:HMM:NF015714.6;locus_tag=HGK48_RS07335;product=ComEC/Rec2 family competence protein;protein_id=WP_011731944.1;transl_table=11 NZ_JAATTN010000155.1 RefSeq gene 3774 4311 . - . ID=gene-HGK48_RS07340;Name=HGK48_RS07340;end_range=4311,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07340;partial=true NZ_JAATTN010000155.1 Protein Homology CDS 3774 4311 . - 1 ID=cds-WP_168236793.1;Parent=gene-HGK48_RS07340;Dbxref=GenBank:WP_168236793.1;Name=WP_168236793.1;Ontology_term=GO:0055085,GO:0015562;end_range=4311,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.6;locus_tag=HGK48_RS07340;partial=true;product=TolC family protein;protein_id=WP_168236793.1;transl_table=11 ##sequence-region NZ_JAATTN010000156.1 1 4249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000156.1 RefSeq region 1 4249 . + . ID=NZ_JAATTN010000156.1:1..4249;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000156.1 RefSeq gene 1 675 . - . ID=gene-HGK48_RS07345;Name=HGK48_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07345;partial=true;start_range=.,1 NZ_JAATTN010000156.1 Protein Homology CDS 1 675 . - 0 ID=cds-WP_168236794.1;Parent=gene-HGK48_RS07345;Dbxref=GenBank:WP_168236794.1;Name=WP_168236794.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.6;locus_tag=HGK48_RS07345;partial=true;product=TolC family protein;protein_id=WP_168236794.1;start_range=.,1;transl_table=11 NZ_JAATTN010000156.1 RefSeq gene 678 2603 . - . ID=gene-HGK48_RS07350;Name=HGK48_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07350 NZ_JAATTN010000156.1 Protein Homology CDS 678 2603 . - 0 ID=cds-WP_002849183.1;Parent=gene-HGK48_RS07350;Dbxref=GenBank:WP_002849183.1;Name=WP_002849183.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849183.1;locus_tag=HGK48_RS07350;product=MacB family efflux pump subunit;protein_id=WP_002849183.1;transl_table=11 NZ_JAATTN010000156.1 RefSeq gene 2600 3784 . - . ID=gene-HGK48_RS07355;Name=HGK48_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07355 NZ_JAATTN010000156.1 Protein Homology CDS 2600 3784 . - 0 ID=cds-WP_011731943.1;Parent=gene-HGK48_RS07355;Dbxref=GenBank:WP_011731943.1;Name=WP_011731943.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731943.1;locus_tag=HGK48_RS07355;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_011731943.1;transl_table=11 ##sequence-region NZ_JAATTN010000157.1 1 4246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000157.1 RefSeq region 1 4246 . + . ID=NZ_JAATTN010000157.1:1..4246;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000157.1 RefSeq gene 100 1158 . - . ID=gene-HGK48_RS07360;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=HGK48_RS07360 NZ_JAATTN010000157.1 Protein Homology CDS 100 1158 . - 0 ID=cds-WP_002848202.1;Parent=gene-HGK48_RS07360;Dbxref=GenBank:WP_002848202.1;Name=WP_002848202.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731728.1;locus_tag=HGK48_RS07360;product=YedE family putative selenium transporter;protein_id=WP_002848202.1;transl_table=11 NZ_JAATTN010000157.1 RefSeq gene 1307 1723 . - . ID=gene-HGK48_RS07365;Name=HGK48_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07365 NZ_JAATTN010000157.1 Protein Homology CDS 1307 1723 . - 0 ID=cds-WP_002848204.1;Parent=gene-HGK48_RS07365;Dbxref=GenBank:WP_002848204.1;Name=WP_002848204.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848204.1;locus_tag=HGK48_RS07365;product=GNAT family N-acetyltransferase;protein_id=WP_002848204.1;transl_table=11 NZ_JAATTN010000157.1 RefSeq gene 1720 2712 . - . ID=gene-HGK48_RS07370;Name=HGK48_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07370 NZ_JAATTN010000157.1 Protein Homology CDS 1720 2712 . - 0 ID=cds-WP_011731729.1;Parent=gene-HGK48_RS07370;Dbxref=GenBank:WP_011731729.1;Name=WP_011731729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731729.1;locus_tag=HGK48_RS07370;product=DUF2156 domain-containing protein;protein_id=WP_011731729.1;transl_table=11 NZ_JAATTN010000157.1 RefSeq gene 2784 3977 . - . ID=gene-HGK48_RS07375;Name=HGK48_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07375 NZ_JAATTN010000157.1 Protein Homology CDS 2784 3977 . - 0 ID=cds-WP_011731730.1;Parent=gene-HGK48_RS07375;Dbxref=GenBank:WP_011731730.1;Name=WP_011731730.1;Ontology_term=GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731730.1;locus_tag=HGK48_RS07375;product=molybdopterin molybdotransferase MoeA;protein_id=WP_011731730.1;transl_table=11 ##sequence-region NZ_JAATTN010000158.1 1 4206 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000158.1 RefSeq region 1 4206 . + . ID=NZ_JAATTN010000158.1:1..4206;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000158.1 RefSeq gene 175 330 . + . ID=gene-HGK48_RS07385;Name=HGK48_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07385 NZ_JAATTN010000158.1 GeneMarkS-2+ CDS 175 330 . + 0 ID=cds-WP_158004742.1;Parent=gene-HGK48_RS07385;Dbxref=GenBank:WP_158004742.1;Name=WP_158004742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07385;product=hypothetical protein;protein_id=WP_158004742.1;transl_table=11 NZ_JAATTN010000158.1 RefSeq gene 505 1173 . + . ID=gene-HGK48_RS07390;Name=HGK48_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07390 NZ_JAATTN010000158.1 Protein Homology CDS 505 1173 . + 0 ID=cds-WP_059431073.1;Parent=gene-HGK48_RS07390;Dbxref=GenBank:WP_059431073.1;Name=WP_059431073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012108065.1;locus_tag=HGK48_RS07390;product=virB8 family protein;protein_id=WP_059431073.1;transl_table=11 NZ_JAATTN010000158.1 RefSeq gene 1175 2116 . + . ID=gene-HGK48_RS07395;Name=virB9;gbkey=Gene;gene=virB9;gene_biotype=protein_coding;locus_tag=HGK48_RS07395 NZ_JAATTN010000158.1 Protein Homology CDS 1175 2116 . + 0 ID=cds-WP_059431072.1;Parent=gene-HGK48_RS07395;Dbxref=GenBank:WP_059431072.1;Name=WP_059431072.1;gbkey=CDS;gene=virB9;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662266.1;locus_tag=HGK48_RS07395;product=P-type conjugative transfer protein VirB9;protein_id=WP_059431072.1;transl_table=11 NZ_JAATTN010000158.1 RefSeq gene 2116 3345 . + . ID=gene-HGK48_RS07400;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=HGK48_RS07400 NZ_JAATTN010000158.1 Protein Homology CDS 2116 3345 . + 0 ID=cds-WP_059431071.1;Parent=gene-HGK48_RS07400;Dbxref=GenBank:WP_059431071.1;Name=WP_059431071.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002826433.1;locus_tag=HGK48_RS07400;product=type IV secretion system protein VirB10;protein_id=WP_059431071.1;transl_table=11 NZ_JAATTN010000158.1 RefSeq gene 3345 3650 . + . ID=gene-HGK48_RS07405;Name=HGK48_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07405 NZ_JAATTN010000158.1 GeneMarkS-2+ CDS 3345 3650 . + 0 ID=cds-WP_168236795.1;Parent=gene-HGK48_RS07405;Dbxref=GenBank:WP_168236795.1;Name=WP_168236795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07405;product=P-loop NTPase family protein;protein_id=WP_168236795.1;transl_table=11 NZ_JAATTN010000158.1 RefSeq gene 3613 4206 . - . ID=gene-HGK48_RS07410;Name=HGK48_RS07410;end_range=4206,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07410;partial=true NZ_JAATTN010000158.1 Protein Homology CDS 3613 4206 . - 0 ID=cds-WP_240944827.1;Parent=gene-HGK48_RS07410;Dbxref=GenBank:WP_240944827.1;Name=WP_240944827.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;end_range=4206,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: protein motif:HMM:NF040570.1;locus_tag=HGK48_RS07410;partial=true;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_240944827.1;transl_table=11 ##sequence-region NZ_JAATTN010000159.1 1 4119 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000159.1 RefSeq region 1 4119 . + . ID=NZ_JAATTN010000159.1:1..4119;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000159.1 RefSeq gene 190 1491 . - . ID=gene-HGK48_RS07415;Name=HGK48_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07415 NZ_JAATTN010000159.1 Protein Homology CDS 190 1491 . - 0 ID=cds-WP_002848683.1;Parent=gene-HGK48_RS07415;Dbxref=GenBank:WP_002848683.1;Name=WP_002848683.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848683.1;locus_tag=HGK48_RS07415;product=TolC family protein;protein_id=WP_002848683.1;transl_table=11 NZ_JAATTN010000159.1 RefSeq gene 1481 2764 . - . ID=gene-HGK48_RS07420;Name=HGK48_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07420 NZ_JAATTN010000159.1 Protein Homology CDS 1481 2764 . - 0 ID=cds-WP_002848685.1;Parent=gene-HGK48_RS07420;Dbxref=GenBank:WP_002848685.1;Name=WP_002848685.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848685.1;locus_tag=HGK48_RS07420;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_002848685.1;transl_table=11 NZ_JAATTN010000159.1 RefSeq gene 2764 4119 . - . ID=gene-HGK48_RS07425;Name=HGK48_RS07425;end_range=4119,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07425;partial=true NZ_JAATTN010000159.1 Protein Homology CDS 2764 4119 . - 0 ID=cds-WP_168236796.1;Parent=gene-HGK48_RS07425;Dbxref=GenBank:WP_168236796.1;Name=WP_168236796.1;Ontology_term=GO:0030253,GO:0005524,GO:0016887,GO:0034040,GO:0140359,GO:0030256;end_range=4119,.;gbkey=CDS;go_component=type I protein secretion system complex|0030256||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848686.1;locus_tag=HGK48_RS07425;partial=true;product=type I secretion system permease/ATPase;protein_id=WP_168236796.1;transl_table=11 ##sequence-region NZ_JAATTN010000015.1 1 15492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000015.1 RefSeq region 1 15492 . + . ID=NZ_JAATTN010000015.1:1..15492;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000015.1 RefSeq gene 1 358 . + . ID=gene-HGK48_RS01560;Name=HGK48_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01560;partial=true;start_range=.,1 NZ_JAATTN010000015.1 Protein Homology CDS 1 358 . + 1 ID=cds-WP_206120289.1;Parent=gene-HGK48_RS01560;Dbxref=GenBank:WP_206120289.1;Name=WP_206120289.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0005525,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732237.1;locus_tag=HGK48_RS01560;partial=true;product=SelB domain-containing protein;protein_id=WP_206120289.1;start_range=.,1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 404 1144 . + . ID=gene-HGK48_RS01565;Name=HGK48_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01565 NZ_JAATTN010000015.1 GeneMarkS-2+ CDS 404 1144 . + 0 ID=cds-WP_002850568.1;Parent=gene-HGK48_RS01565;Dbxref=GenBank:WP_002850568.1;Name=WP_002850568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01565;product=thioredoxin domain-containing protein;protein_id=WP_002850568.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 1214 1891 . + . ID=gene-HGK48_RS01570;Name=pseF;gbkey=Gene;gene=pseF;gene_biotype=protein_coding;locus_tag=HGK48_RS01570 NZ_JAATTN010000015.1 Protein Homology CDS 1214 1891 . + 0 ID=cds-WP_002850570.1;Parent=gene-HGK48_RS01570;Dbxref=GenBank:WP_002850570.1;Name=WP_002850570.1;Ontology_term=GO:0070567;gbkey=CDS;gene=pseF;go_function=cytidylyltransferase activity|0070567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850570.1;locus_tag=HGK48_RS01570;product=pseudaminic acid cytidylyltransferase;protein_id=WP_002850570.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 1881 2657 . + . ID=gene-HGK48_RS01575;Name=HGK48_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01575 NZ_JAATTN010000015.1 Protein Homology CDS 1881 2657 . + 0 ID=cds-WP_168236646.1;Parent=gene-HGK48_RS01575;Dbxref=GenBank:WP_168236646.1;Name=WP_168236646.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013429.6;locus_tag=HGK48_RS01575;product=TIM barrel protein;protein_id=WP_168236646.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 2654 2863 . + . ID=gene-HGK48_RS01580;Name=HGK48_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01580 NZ_JAATTN010000015.1 GeneMarkS-2+ CDS 2654 2863 . + 0 ID=cds-WP_011732238.1;Parent=gene-HGK48_RS01580;Dbxref=GenBank:WP_011732238.1;Name=WP_011732238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01580;product=phosphoribosylglycinamide formyltransferase 2;protein_id=WP_011732238.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 3051 3854 . + . ID=gene-HGK48_RS01585;Name=HGK48_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01585 NZ_JAATTN010000015.1 Protein Homology CDS 3051 3854 . + 0 ID=cds-WP_002850573.1;Parent=gene-HGK48_RS01585;Dbxref=GenBank:WP_002850573.1;Name=WP_002850573.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: protein motif:HMM:NF024925.6;locus_tag=HGK48_RS01585;product=ATP-grasp domain-containing protein;protein_id=WP_002850573.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 3851 4243 . + . ID=gene-HGK48_RS01590;Name=HGK48_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01590 NZ_JAATTN010000015.1 Protein Homology CDS 3851 4243 . + 0 ID=cds-WP_035148230.1;Parent=gene-HGK48_RS01590;Dbxref=GenBank:WP_035148230.1;Name=WP_035148230.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=HGK48_RS01590;product=class I SAM-dependent methyltransferase;protein_id=WP_035148230.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 4307 4945 . + . ID=gene-HGK48_RS01595;Name=HGK48_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01595 NZ_JAATTN010000015.1 Protein Homology CDS 4307 4945 . + 0 ID=cds-WP_002850926.1;Parent=gene-HGK48_RS01595;Dbxref=GenBank:WP_002850926.1;Name=WP_002850926.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850926.1;locus_tag=HGK48_RS01595;product=IS607-like element ISCfe1 family transposase;protein_id=WP_002850926.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 4932 6224 . + . ID=gene-HGK48_RS01600;Name=HGK48_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01600 NZ_JAATTN010000015.1 Protein Homology CDS 4932 6224 . + 0 ID=cds-WP_179366716.1;Parent=gene-HGK48_RS01600;Dbxref=GenBank:WP_179366716.1;Name=WP_179366716.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782962.1;locus_tag=HGK48_RS01600;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_179366716.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq pseudogene 6270 6488 . + . ID=gene-HGK48_RS01605;Name=HGK48_RS01605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS01605;partial=true;pseudo=true;start_range=.,6270 NZ_JAATTN010000015.1 Protein Homology CDS 6270 6488 . + 0 ID=cds-HGK48_RS01605;Parent=gene-HGK48_RS01605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779836.1;locus_tag=HGK48_RS01605;partial=true;product=Fic/DOC family protein;pseudo=true;start_range=.,6270;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 6550 7017 . + . ID=gene-HGK48_RS01610;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=HGK48_RS01610 NZ_JAATTN010000015.1 Protein Homology CDS 6550 7017 . + 0 ID=cds-WP_168236647.1;Parent=gene-HGK48_RS01610;Dbxref=GenBank:WP_168236647.1;Name=WP_168236647.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: protein motif:HMM:NF021981.6;locus_tag=HGK48_RS01610;product=signal peptidase I;protein_id=WP_168236647.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 7004 7375 . + . ID=gene-HGK48_RS01615;Name=HGK48_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01615 NZ_JAATTN010000015.1 Protein Homology CDS 7004 7375 . + 0 ID=cds-WP_035171233.1;Parent=gene-HGK48_RS01615;Dbxref=GenBank:WP_035171233.1;Name=WP_035171233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782959.1;locus_tag=HGK48_RS01615;product=conjugal transfer protein TraM;protein_id=WP_035171233.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 7476 8162 . + . ID=gene-HGK48_RS01620;Name=HGK48_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01620 NZ_JAATTN010000015.1 Protein Homology CDS 7476 8162 . + 0 ID=cds-WP_065840814.1;Parent=gene-HGK48_RS01620;Dbxref=GenBank:WP_065840814.1;Name=WP_065840814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850991.1;locus_tag=HGK48_RS01620;product=AAA family ATPase;protein_id=WP_065840814.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 8303 8890 . + . ID=gene-HGK48_RS01625;Name=HGK48_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01625 NZ_JAATTN010000015.1 GeneMarkS-2+ CDS 8303 8890 . + 0 ID=cds-WP_168236648.1;Parent=gene-HGK48_RS01625;Dbxref=GenBank:WP_168236648.1;Name=WP_168236648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01625;product=hypothetical protein;protein_id=WP_168236648.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 8991 9206 . + . ID=gene-HGK48_RS01630;Name=HGK48_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01630 NZ_JAATTN010000015.1 Protein Homology CDS 8991 9206 . + 0 ID=cds-WP_035171239.1;Parent=gene-HGK48_RS01630;Dbxref=GenBank:WP_035171239.1;Name=WP_035171239.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779829.1;locus_tag=HGK48_RS01630;product=plasmid mobilization protein;protein_id=WP_035171239.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 9279 10841 . - . ID=gene-HGK48_RS01635;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=HGK48_RS01635 NZ_JAATTN010000015.1 Protein Homology CDS 9279 10841 . - 0 ID=cds-WP_168236649.1;Parent=gene-HGK48_RS01635;Dbxref=GenBank:WP_168236649.1;Name=WP_168236649.1;gbkey=CDS;gene=traI;inference=COORDINATES: protein motif:HMM:NF041893.1;locus_tag=HGK48_RS01635;product=TraI/MobA(P) family conjugative relaxase;protein_id=WP_168236649.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 10816 11184 . - . ID=gene-HGK48_RS01640;Name=HGK48_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01640 NZ_JAATTN010000015.1 Protein Homology CDS 10816 11184 . - 0 ID=cds-WP_002850997.1;Parent=gene-HGK48_RS01640;Dbxref=GenBank:WP_002850997.1;Name=WP_002850997.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850997.1;locus_tag=HGK48_RS01640;product=plasmid mobilization protein;protein_id=WP_002850997.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 11399 11614 . + . ID=gene-HGK48_RS01645;Name=HGK48_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01645 NZ_JAATTN010000015.1 GeneMarkS-2+ CDS 11399 11614 . + 0 ID=cds-WP_144089772.1;Parent=gene-HGK48_RS01645;Dbxref=GenBank:WP_144089772.1;Name=WP_144089772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01645;product=hypothetical protein;protein_id=WP_144089772.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 11607 11882 . + . ID=gene-HGK48_RS01650;Name=HGK48_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01650 NZ_JAATTN010000015.1 Protein Homology CDS 11607 11882 . + 0 ID=cds-WP_035148435.1;Parent=gene-HGK48_RS01650;Dbxref=GenBank:WP_035148435.1;Name=WP_035148435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782140.1;locus_tag=HGK48_RS01650;product=type II toxin-antitoxin system YafQ family toxin;protein_id=WP_035148435.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 11879 12229 . + . ID=gene-HGK48_RS01655;Name=HGK48_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01655 NZ_JAATTN010000015.1 Protein Homology CDS 11879 12229 . + 0 ID=cds-WP_002851003.1;Parent=gene-HGK48_RS01655;Dbxref=GenBank:WP_002851003.1;Name=WP_002851003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002783722.1;locus_tag=HGK48_RS01655;product=hypothetical protein;protein_id=WP_002851003.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 12213 13046 . + . ID=gene-HGK48_RS01660;Name=HGK48_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01660 NZ_JAATTN010000015.1 Protein Homology CDS 12213 13046 . + 0 ID=cds-WP_168236650.1;Parent=gene-HGK48_RS01660;Dbxref=GenBank:WP_168236650.1;Name=WP_168236650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042758.4;locus_tag=HGK48_RS01660;product=DUF6685 family protein;protein_id=WP_168236650.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 13651 14475 . + . ID=gene-HGK48_RS01665;Name=HGK48_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01665 NZ_JAATTN010000015.1 Protein Homology CDS 13651 14475 . + 0 ID=cds-WP_035148431.1;Parent=gene-HGK48_RS01665;Dbxref=GenBank:WP_035148431.1;Name=WP_035148431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662286.1;locus_tag=HGK48_RS01665;product=hypothetical protein;protein_id=WP_035148431.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 14472 14882 . + . ID=gene-HGK48_RS01670;Name=HGK48_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01670 NZ_JAATTN010000015.1 Protein Homology CDS 14472 14882 . + 0 ID=cds-WP_002851008.1;Parent=gene-HGK48_RS01670;Dbxref=GenBank:WP_002851008.1;Name=WP_002851008.1;Ontology_term=GO:0004540,GO:0046872,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851008.1;locus_tag=HGK48_RS01670;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_002851008.1;transl_table=11 NZ_JAATTN010000015.1 RefSeq gene 15045 15492 . - . ID=gene-HGK48_RS01675;Name=HGK48_RS01675;end_range=15492,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01675;partial=true NZ_JAATTN010000015.1 Protein Homology CDS 15045 15492 . - 1 ID=cds-WP_168236651.1;Parent=gene-HGK48_RS01675;Dbxref=GenBank:WP_168236651.1;Name=WP_168236651.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;end_range=15492,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846383.1;locus_tag=HGK48_RS01675;partial=true;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_168236651.1;transl_table=11 ##sequence-region NZ_JAATTN010000160.1 1 4184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000160.1 RefSeq region 1 4184 . + . ID=NZ_JAATTN010000160.1:1..4184;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000160.1 RefSeq gene 1 780 . - . ID=gene-HGK48_RS07430;Name=HGK48_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07430;partial=true;start_range=.,1 NZ_JAATTN010000160.1 Protein Homology CDS 1 780 . - 0 ID=cds-WP_168236797.1;Parent=gene-HGK48_RS07430;Dbxref=GenBank:WP_168236797.1;Name=WP_168236797.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848047.1;locus_tag=HGK48_RS07430;partial=true;product=polyprenyl synthetase family protein;protein_id=WP_168236797.1;start_range=.,1;transl_table=11 NZ_JAATTN010000160.1 RefSeq gene 777 1853 . - . ID=gene-HGK48_RS07435;Name=HGK48_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07435 NZ_JAATTN010000160.1 Protein Homology CDS 777 1853 . - 0 ID=cds-WP_011731685.1;Parent=gene-HGK48_RS07435;Dbxref=GenBank:WP_011731685.1;Name=WP_011731685.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048336.1;locus_tag=HGK48_RS07435;product=DUF7488 domain-containing protein;protein_id=WP_011731685.1;transl_table=11 NZ_JAATTN010000160.1 RefSeq gene 1855 2166 . - . ID=gene-HGK48_RS07440;Name=HGK48_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07440 NZ_JAATTN010000160.1 Protein Homology CDS 1855 2166 . - 0 ID=cds-WP_002848044.1;Parent=gene-HGK48_RS07440;Dbxref=GenBank:WP_002848044.1;Name=WP_002848044.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848044.1;locus_tag=HGK48_RS07440;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_002848044.1;transl_table=11 NZ_JAATTN010000160.1 RefSeq gene 2232 3287 . - . ID=gene-HGK48_RS11550;Name=HGK48_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11550 NZ_JAATTN010000160.1 Protein Homology CDS 2232 3287 . - 0 ID=cds-WP_372682912.1;Parent=gene-HGK48_RS11550;Dbxref=GenBank:WP_372682912.1;Name=WP_372682912.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=HGK48_RS11550;product=methyl-accepting chemotaxis protein;protein_id=WP_372682912.1;transl_table=11 NZ_JAATTN010000160.1 RefSeq pseudogene 3324 3878 . - . ID=gene-HGK48_RS11555;Name=HGK48_RS11555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11555;partial=true;pseudo=true;start_range=.,3324 NZ_JAATTN010000160.1 Protein Homology CDS 3324 3878 . - 0 ID=cds-HGK48_RS11555;Parent=gene-HGK48_RS11555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024140.6;locus_tag=HGK48_RS11555;partial=true;product=MCP four helix bundle domain-containing protein;pseudo=true;start_range=.,3324;transl_table=11 ##sequence-region NZ_JAATTN010000161.1 1 4096 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000161.1 RefSeq region 1 4096 . + . ID=NZ_JAATTN010000161.1:1..4096;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000161.1 RefSeq gene 1 2421 . - . ID=gene-HGK48_RS07450;Name=HGK48_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07450;partial=true;start_range=.,1 NZ_JAATTN010000161.1 Protein Homology CDS 1 2421 . - 0 ID=cds-WP_168236798.1;Parent=gene-HGK48_RS07450;Dbxref=GenBank:WP_168236798.1;Name=WP_168236798.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF040179.5;locus_tag=HGK48_RS07450;partial=true;product=VirB4 family type IV secretion/conjugal transfer ATPase;protein_id=WP_168236798.1;start_range=.,1;transl_table=11 NZ_JAATTN010000161.1 RefSeq pseudogene 2421 2693 . - . ID=gene-HGK48_RS07455;Name=HGK48_RS07455;end_range=2693,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS07455;partial=true;pseudo=true NZ_JAATTN010000161.1 Protein Homology CDS 2421 2693 . - 0 ID=cds-HGK48_RS07455;Parent=gene-HGK48_RS07455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2693,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016820.6;locus_tag=HGK48_RS07455;partial=true;product=TrbC/VirB2 family protein;pseudo=true;transl_table=11 NZ_JAATTN010000161.1 RefSeq gene 2821 3174 . - . ID=gene-HGK48_RS07460;Name=HGK48_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07460 NZ_JAATTN010000161.1 GeneMarkS-2+ CDS 2821 3174 . - 0 ID=cds-WP_035170870.1;Parent=gene-HGK48_RS07460;Dbxref=GenBank:WP_035170870.1;Name=WP_035170870.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07460;product=hypothetical protein;protein_id=WP_035170870.1;transl_table=11 NZ_JAATTN010000161.1 RefSeq gene 3308 3976 . - . ID=gene-HGK48_RS07465;Name=HGK48_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07465 NZ_JAATTN010000161.1 Protein Homology CDS 3308 3976 . - 0 ID=cds-WP_035170872.1;Parent=gene-HGK48_RS07465;Dbxref=GenBank:WP_035170872.1;Name=WP_035170872.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: protein motif:HMM:NF014691.6;locus_tag=HGK48_RS07465;product=Fic family protein;protein_id=WP_035170872.1;transl_table=11 ##sequence-region NZ_JAATTN010000162.1 1 4176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000162.1 RefSeq region 1 4176 . + . ID=NZ_JAATTN010000162.1:1..4176;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000162.1 RefSeq gene 1 3985 . + . ID=gene-HGK48_RS07470;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=HGK48_RS07470;partial=true;start_range=.,1 NZ_JAATTN010000162.1 Protein Homology CDS 1 3985 . + 1 ID=cds-WP_168236799.1;Parent=gene-HGK48_RS07470;Dbxref=GenBank:WP_168236799.1;Name=WP_168236799.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732133.1;locus_tag=HGK48_RS07470;partial=true;product=DNA polymerase III subunit alpha;protein_id=WP_168236799.1;start_range=.,1;transl_table=11 NZ_JAATTN010000162.1 RefSeq gene 3972 4176 . - . ID=gene-HGK48_RS07475;Name=HGK48_RS07475;end_range=4176,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07475;partial=true NZ_JAATTN010000162.1 Protein Homology CDS 3972 4176 . - 1 ID=cds-WP_240944828.1;Parent=gene-HGK48_RS07475;Dbxref=GenBank:WP_240944828.1;Name=WP_240944828.1;end_range=4176,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850001.1;locus_tag=HGK48_RS07475;partial=true;product=ATP-binding protein;protein_id=WP_240944828.1;transl_table=11 ##sequence-region NZ_JAATTN010000163.1 1 4076 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000163.1 RefSeq region 1 4076 . + . ID=NZ_JAATTN010000163.1:1..4076;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000163.1 RefSeq pseudogene 1 127 . - . ID=gene-HGK48_RS11255;Name=HGK48_RS11255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11255;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000163.1 Protein Homology CDS 1 127 . - 0 ID=cds-HGK48_RS11255;Parent=gene-HGK48_RS11255;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731872.1;locus_tag=HGK48_RS11255;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000163.1 RefSeq gene 223 1095 . + . ID=gene-HGK48_RS07480;Name=HGK48_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07480 NZ_JAATTN010000163.1 Protein Homology CDS 223 1095 . + 0 ID=cds-WP_002848941.1;Parent=gene-HGK48_RS07480;Dbxref=GenBank:WP_002848941.1;Name=WP_002848941.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848941.1;locus_tag=HGK48_RS07480;product=D-amino-acid transaminase;protein_id=WP_002848941.1;transl_table=11 NZ_JAATTN010000163.1 RefSeq gene 1153 1923 . - . ID=gene-HGK48_RS11560;Name=HGK48_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11560 NZ_JAATTN010000163.1 Protein Homology CDS 1153 1923 . - 0 ID=cds-WP_224727751.1;Parent=gene-HGK48_RS11560;Dbxref=GenBank:WP_224727751.1;Name=WP_224727751.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=HGK48_RS11560;product=methyl-accepting chemotaxis protein;protein_id=WP_224727751.1;transl_table=11 NZ_JAATTN010000163.1 RefSeq pseudogene 2014 2706 . - . ID=gene-HGK48_RS11565;Name=HGK48_RS11565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11565;partial=true;pseudo=true;start_range=.,2014 NZ_JAATTN010000163.1 Protein Homology CDS 2014 2706 . - 0 ID=cds-HGK48_RS11565;Parent=gene-HGK48_RS11565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044826.3;locus_tag=HGK48_RS11565;partial=true;product=HAMP domain-containing protein;pseudo=true;start_range=.,2014;transl_table=11 NZ_JAATTN010000163.1 RefSeq gene 2835 3116 . - . ID=gene-HGK48_RS07490;Name=HGK48_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07490 NZ_JAATTN010000163.1 Protein Homology CDS 2835 3116 . - 0 ID=cds-WP_002848937.1;Parent=gene-HGK48_RS07490;Dbxref=GenBank:WP_002848937.1;Name=WP_002848937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848937.1;locus_tag=HGK48_RS07490;product=metal-sulfur cluster assembly factor;protein_id=WP_002848937.1;transl_table=11 NZ_JAATTN010000163.1 RefSeq gene 3113 4076 . - . ID=gene-HGK48_RS07495;Name=HGK48_RS07495;end_range=4076,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07495;partial=true NZ_JAATTN010000163.1 GeneMarkS-2+ CDS 3113 4076 . - 1 ID=cds-WP_168236800.1;Parent=gene-HGK48_RS07495;Dbxref=GenBank:WP_168236800.1;Name=WP_168236800.1;end_range=4076,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07495;partial=true;product=peptidase M50;protein_id=WP_168236800.1;transl_table=11 ##sequence-region NZ_JAATTN010000164.1 1 4144 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000164.1 RefSeq region 1 4144 . + . ID=NZ_JAATTN010000164.1:1..4144;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000164.1 RefSeq gene 42 1406 . - . ID=gene-HGK48_RS07500;Name=HGK48_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07500 NZ_JAATTN010000164.1 Protein Homology CDS 42 1406 . - 0 ID=cds-WP_002848868.1;Parent=gene-HGK48_RS07500;Dbxref=GenBank:WP_002848868.1;Name=WP_002848868.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021587.6;locus_tag=HGK48_RS07500;product=Fe-S-containing protein;protein_id=WP_002848868.1;transl_table=11 NZ_JAATTN010000164.1 RefSeq gene 1579 2100 . - . ID=gene-HGK48_RS07505;Name=HGK48_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07505 NZ_JAATTN010000164.1 Protein Homology CDS 1579 2100 . - 0 ID=cds-WP_002848867.1;Parent=gene-HGK48_RS07505;Dbxref=GenBank:WP_002848867.1;Name=WP_002848867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848867.1;locus_tag=HGK48_RS07505;product=iron transporter;protein_id=WP_002848867.1;transl_table=11 NZ_JAATTN010000164.1 RefSeq gene 2097 4010 . - . ID=gene-HGK48_RS07510;Name=HGK48_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07510 NZ_JAATTN010000164.1 Protein Homology CDS 2097 4010 . - 0 ID=cds-WP_002848866.1;Parent=gene-HGK48_RS07510;Dbxref=GenBank:WP_002848866.1;Name=WP_002848866.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848866.1;locus_tag=HGK48_RS07510;product=FTR1 family iron permease;protein_id=WP_002848866.1;transl_table=11 ##sequence-region NZ_JAATTN010000165.1 1 4120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000165.1 RefSeq region 1 4120 . + . ID=NZ_JAATTN010000165.1:1..4120;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000165.1 RefSeq gene 332 1390 . + . ID=gene-HGK48_RS07515;Name=HGK48_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07515 NZ_JAATTN010000165.1 Protein Homology CDS 332 1390 . + 0 ID=cds-WP_010404337.1;Parent=gene-HGK48_RS07515;Dbxref=GenBank:WP_010404337.1;Name=WP_010404337.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: protein motif:HMM:NF013235.6;locus_tag=HGK48_RS07515;product=replication initiation protein;protein_id=WP_010404337.1;transl_table=11 NZ_JAATTN010000165.1 RefSeq gene 1433 1711 . + . ID=gene-HGK48_RS07520;Name=HGK48_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07520 NZ_JAATTN010000165.1 Protein Homology CDS 1433 1711 . + 0 ID=cds-WP_025370516.1;Parent=gene-HGK48_RS07520;Dbxref=GenBank:WP_025370516.1;Name=WP_025370516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013459398.1;locus_tag=HGK48_RS07520;product=BrnT family toxin;protein_id=WP_025370516.1;transl_table=11 NZ_JAATTN010000165.1 RefSeq gene 1708 1914 . + . ID=gene-HGK48_RS07525;Name=HGK48_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07525 NZ_JAATTN010000165.1 Protein Homology CDS 1708 1914 . + 0 ID=cds-WP_025370515.1;Parent=gene-HGK48_RS07525;Dbxref=GenBank:WP_025370515.1;Name=WP_025370515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943187.1;locus_tag=HGK48_RS07525;product=hypothetical protein;protein_id=WP_025370515.1;transl_table=11 NZ_JAATTN010000165.1 RefSeq gene 2036 3394 . - . ID=gene-HGK48_RS07530;Name=HGK48_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07530 NZ_JAATTN010000165.1 Protein Homology CDS 2036 3394 . - 0 ID=cds-WP_025370514.1;Parent=gene-HGK48_RS07530;Dbxref=GenBank:WP_025370514.1;Name=WP_025370514.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015397.6;locus_tag=HGK48_RS07530;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_025370514.1;transl_table=11 NZ_JAATTN010000165.1 RefSeq gene 3384 3692 . - . ID=gene-HGK48_RS07535;Name=HGK48_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07535 NZ_JAATTN010000165.1 Protein Homology CDS 3384 3692 . - 0 ID=cds-WP_010404332.1;Parent=gene-HGK48_RS07535;Dbxref=GenBank:WP_010404332.1;Name=WP_010404332.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001941830.1;locus_tag=HGK48_RS07535;product=plasmid mobilization protein;protein_id=WP_010404332.1;transl_table=11 ##sequence-region NZ_JAATTN010000166.1 1 4079 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000166.1 RefSeq region 1 4079 . + . ID=NZ_JAATTN010000166.1:1..4079;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000166.1 RefSeq gene 1 1208 . - . ID=gene-HGK48_RS07540;Name=HGK48_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07540;partial=true;start_range=.,1 NZ_JAATTN010000166.1 Protein Homology CDS 1 1208 . - 0 ID=cds-WP_206120309.1;Parent=gene-HGK48_RS07540;Dbxref=GenBank:WP_206120309.1;Name=WP_206120309.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023351.6;locus_tag=HGK48_RS07540;partial=true;product=inverse autotransporter beta domain-containing protein;protein_id=WP_206120309.1;start_range=.,1;transl_table=11 NZ_JAATTN010000166.1 RefSeq gene 1217 2641 . - . ID=gene-HGK48_RS07545;Name=HGK48_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07545 NZ_JAATTN010000166.1 Protein Homology CDS 1217 2641 . - 0 ID=cds-WP_316242795.1;Parent=gene-HGK48_RS07545;Dbxref=GenBank:WP_316242795.1;Name=WP_316242795.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: protein motif:HMM:NF013311.6;locus_tag=HGK48_RS07545;product=DNA topoisomerase;protein_id=WP_316242795.1;transl_table=11 NZ_JAATTN010000166.1 RefSeq gene 2665 3234 . - . ID=gene-HGK48_RS11595;Name=HGK48_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11595 NZ_JAATTN010000166.1 Protein Homology CDS 2665 3234 . - 0 ID=cds-WP_316242763.1;Parent=gene-HGK48_RS11595;Dbxref=GenBank:WP_316242763.1;Name=WP_316242763.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013878.6;locus_tag=HGK48_RS11595;product=toprim domain-containing protein;protein_id=WP_316242763.1;transl_table=11 NZ_JAATTN010000166.1 RefSeq gene 3318 4031 . - . ID=gene-HGK48_RS07550;Name=HGK48_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07550 NZ_JAATTN010000166.1 Protein Homology CDS 3318 4031 . - 0 ID=cds-WP_065840839.1;Parent=gene-HGK48_RS07550;Dbxref=GenBank:WP_065840839.1;Name=WP_065840839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662274.1;locus_tag=HGK48_RS07550;product=hypothetical protein;protein_id=WP_065840839.1;transl_table=11 ##sequence-region NZ_JAATTN010000167.1 1 4048 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000167.1 RefSeq region 1 4048 . + . ID=NZ_JAATTN010000167.1:1..4048;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000167.1 RefSeq pseudogene 1 2132 . + . ID=gene-HGK48_RS07555;Name=HGK48_RS07555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS07555;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000167.1 Protein Homology CDS 1 2132 . + 2 ID=cds-HGK48_RS07555;Parent=gene-HGK48_RS07555;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731831.1;locus_tag=HGK48_RS07555;partial=true;product=beta strand repeat-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000167.1 RefSeq gene 2362 3750 . + . ID=gene-HGK48_RS07560;Name=HGK48_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07560 NZ_JAATTN010000167.1 Protein Homology CDS 2362 3750 . + 0 ID=cds-WP_002848691.1;Parent=gene-HGK48_RS07560;Dbxref=GenBank:WP_002848691.1;Name=WP_002848691.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848691.1;locus_tag=HGK48_RS07560;product=ATP-binding protein;protein_id=WP_002848691.1;transl_table=11 ##sequence-region NZ_JAATTN010000168.1 1 3940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000168.1 RefSeq region 1 3940 . + . ID=NZ_JAATTN010000168.1:1..3940;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000168.1 RefSeq gene 1 644 . - . ID=gene-HGK48_RS07565;Name=HGK48_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07565;partial=true;start_range=.,1 NZ_JAATTN010000168.1 Protein Homology CDS 1 644 . - 0 ID=cds-WP_168236801.1;Parent=gene-HGK48_RS07565;Dbxref=GenBank:WP_168236801.1;Name=WP_168236801.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848575.1;locus_tag=HGK48_RS07565;partial=true;product=HAD family hydrolase;protein_id=WP_168236801.1;start_range=.,1;transl_table=11 NZ_JAATTN010000168.1 RefSeq gene 653 1477 . - . ID=gene-HGK48_RS07570;Name=HGK48_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07570 NZ_JAATTN010000168.1 Protein Homology CDS 653 1477 . - 0 ID=cds-WP_002848573.1;Parent=gene-HGK48_RS07570;Dbxref=GenBank:WP_002848573.1;Name=WP_002848573.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848573.1;locus_tag=HGK48_RS07570;product=mechanosensitive ion channel family protein;protein_id=WP_002848573.1;transl_table=11 NZ_JAATTN010000168.1 RefSeq gene 1483 2520 . - . ID=gene-HGK48_RS07575;Name=HGK48_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07575 NZ_JAATTN010000168.1 Protein Homology CDS 1483 2520 . - 0 ID=cds-WP_002848571.1;Parent=gene-HGK48_RS07575;Dbxref=GenBank:WP_002848571.1;Name=WP_002848571.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731796.1;locus_tag=HGK48_RS07575;product=OmpA family protein;protein_id=WP_002848571.1;transl_table=11 NZ_JAATTN010000168.1 RefSeq gene 2820 3209 . - . ID=gene-HGK48_RS07580;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=HGK48_RS07580 NZ_JAATTN010000168.1 Protein Homology CDS 2820 3209 . - 0 ID=cds-WP_002848569.1;Parent=gene-HGK48_RS07580;Dbxref=GenBank:WP_002848569.1;Name=WP_002848569.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012661126.1;locus_tag=HGK48_RS07580;product=30S ribosomal protein S9;protein_id=WP_002848569.1;transl_table=11 NZ_JAATTN010000168.1 RefSeq gene 3212 3637 . - . ID=gene-HGK48_RS07585;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=HGK48_RS07585 NZ_JAATTN010000168.1 Protein Homology CDS 3212 3637 . - 0 ID=cds-WP_002848567.1;Parent=gene-HGK48_RS07585;Dbxref=GenBank:WP_002848567.1;Name=WP_002848567.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344860.1;locus_tag=HGK48_RS07585;product=50S ribosomal protein L13;protein_id=WP_002848567.1;transl_table=11 ##sequence-region NZ_JAATTN010000169.1 1 4005 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000169.1 RefSeq region 1 4005 . + . ID=NZ_JAATTN010000169.1:1..4005;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000169.1 RefSeq gene 1 1802 . + . ID=gene-HGK48_RS07590;Name=HGK48_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07590;partial=true;start_range=.,1 NZ_JAATTN010000169.1 Protein Homology CDS 1 1802 . + 2 ID=cds-WP_168236802.1;Parent=gene-HGK48_RS07590;Dbxref=GenBank:WP_168236802.1;Name=WP_168236802.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016853,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,isomerase activity|0016853||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732017.1;locus_tag=HGK48_RS07590;partial=true;product=ATP-dependent helicase;protein_id=WP_168236802.1;start_range=.,1;transl_table=11 NZ_JAATTN010000169.1 RefSeq gene 1872 2657 . - . ID=gene-HGK48_RS07595;Name=HGK48_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07595 NZ_JAATTN010000169.1 Protein Homology CDS 1872 2657 . - 0 ID=cds-WP_011732016.1;Parent=gene-HGK48_RS07595;Dbxref=GenBank:WP_011732016.1;Name=WP_011732016.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF025033.6;locus_tag=HGK48_RS07595;product=class I SAM-dependent methyltransferase;protein_id=WP_011732016.1;transl_table=11 NZ_JAATTN010000169.1 RefSeq gene 3004 3393 . + . ID=gene-HGK48_RS07600;Name=HGK48_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07600 NZ_JAATTN010000169.1 Protein Homology CDS 3004 3393 . + 0 ID=cds-WP_002849502.1;Parent=gene-HGK48_RS07600;Dbxref=GenBank:WP_002849502.1;Name=WP_002849502.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012790.6;locus_tag=HGK48_RS07600;product=rhodanese-like domain-containing protein;protein_id=WP_002849502.1;transl_table=11 NZ_JAATTN010000169.1 RefSeq pseudogene 3433 4005 . - . ID=gene-HGK48_RS07605;Name=HGK48_RS07605;end_range=4005,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS07605;partial=true;pseudo=true NZ_JAATTN010000169.1 Protein Homology CDS 3433 4005 . - 0 ID=cds-HGK48_RS07605;Parent=gene-HGK48_RS07605;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4005,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940997.1;locus_tag=HGK48_RS07605;partial=true;product=molecular chaperone HtpG;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000016.1 1 15054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000016.1 RefSeq region 1 15054 . + . ID=NZ_JAATTN010000016.1:1..15054;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000016.1 RefSeq gene 65 2623 . + . ID=gene-HGK48_RS01680;Name=HGK48_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01680 NZ_JAATTN010000016.1 Protein Homology CDS 65 2623 . + 0 ID=cds-WP_002849546.1;Parent=gene-HGK48_RS01680;Dbxref=GenBank:WP_002849546.1;Name=WP_002849546.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539;gbkey=CDS;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732036.1;locus_tag=HGK48_RS01680;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_002849546.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq pseudogene 2768 2836 . - . ID=gene-HGK48_RS11145;Name=HGK48_RS11145;end_range=2836,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11145;partial=true;pseudo=true;start_range=.,2768 NZ_JAATTN010000016.1 Protein Homology CDS 2768 2836 . - 0 ID=cds-HGK48_RS11145;Parent=gene-HGK48_RS11145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2836,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343491.1;locus_tag=HGK48_RS11145;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2768;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 3174 3563 . - . ID=gene-HGK48_RS01690;Name=HGK48_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01690 NZ_JAATTN010000016.1 Protein Homology CDS 3174 3563 . - 0 ID=cds-WP_010395446.1;Parent=gene-HGK48_RS01690;Dbxref=GenBank:WP_010395446.1;Name=WP_010395446.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF046343.2;locus_tag=HGK48_RS01690;product=cache domain-containing protein;protein_id=WP_010395446.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 4631 5005 . + . ID=gene-HGK48_RS01695;Name=HGK48_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01695 NZ_JAATTN010000016.1 Protein Homology CDS 4631 5005 . + 0 ID=cds-WP_002849544.1;Parent=gene-HGK48_RS01695;Dbxref=GenBank:WP_002849544.1;Name=WP_002849544.1;Ontology_term=GO:0005344,GO:0019825,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxygen carrier activity|0005344||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849544.1;locus_tag=HGK48_RS01695;product=group III truncated hemoglobin;protein_id=WP_002849544.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 5075 6871 . - . ID=gene-HGK48_RS01700;Name=HGK48_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01700 NZ_JAATTN010000016.1 Protein Homology CDS 5075 6871 . - 0 ID=cds-WP_168236653.1;Parent=gene-HGK48_RS01700;Dbxref=GenBank:WP_168236653.1;Name=WP_168236653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037112.6;locus_tag=HGK48_RS01700;product=putative barnase/colicin E5 family endoribonuclease;protein_id=WP_168236653.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 7230 7991 . - . ID=gene-HGK48_RS01705;Name=HGK48_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01705 NZ_JAATTN010000016.1 Protein Homology CDS 7230 7991 . - 0 ID=cds-WP_065840836.1;Parent=gene-HGK48_RS01705;Dbxref=GenBank:WP_065840836.1;Name=WP_065840836.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002854976.1;locus_tag=HGK48_RS01705;product=DNA adenine methylase;protein_id=WP_065840836.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 8066 8620 . - . ID=gene-HGK48_RS01710;Name=HGK48_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01710 NZ_JAATTN010000016.1 Protein Homology CDS 8066 8620 . - 0 ID=cds-WP_025370343.1;Parent=gene-HGK48_RS01710;Dbxref=GenBank:WP_025370343.1;Name=WP_025370343.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848769.1;locus_tag=HGK48_RS01710;product=glycoside hydrolase family 108 protein;protein_id=WP_025370343.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 8607 8957 . - . ID=gene-HGK48_RS01715;Name=HGK48_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01715 NZ_JAATTN010000016.1 Protein Homology CDS 8607 8957 . - 0 ID=cds-WP_025370344.1;Parent=gene-HGK48_RS01715;Dbxref=GenBank:WP_025370344.1;Name=WP_025370344.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027409.6;locus_tag=HGK48_RS01715;product=phage holin family protein;protein_id=WP_025370344.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 9037 9198 . - . ID=gene-HGK48_RS01720;Name=HGK48_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01720 NZ_JAATTN010000016.1 GeneMarkS-2+ CDS 9037 9198 . - 0 ID=cds-WP_010401160.1;Parent=gene-HGK48_RS01720;Dbxref=GenBank:WP_010401160.1;Name=WP_010401160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01720;product=hypothetical protein;protein_id=WP_010401160.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 9185 9550 . - . ID=gene-HGK48_RS01725;Name=HGK48_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01725 NZ_JAATTN010000016.1 GeneMarkS-2+ CDS 9185 9550 . - 0 ID=cds-WP_025370345.1;Parent=gene-HGK48_RS01725;Dbxref=GenBank:WP_025370345.1;Name=WP_025370345.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01725;product=hypothetical protein;protein_id=WP_025370345.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 9555 9803 . - . ID=gene-HGK48_RS01730;Name=HGK48_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01730 NZ_JAATTN010000016.1 GeneMarkS-2+ CDS 9555 9803 . - 0 ID=cds-WP_024305154.1;Parent=gene-HGK48_RS01730;Dbxref=GenBank:WP_024305154.1;Name=WP_024305154.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01730;product=hypothetical protein;protein_id=WP_024305154.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 9808 10350 . - . ID=gene-HGK48_RS01735;Name=HGK48_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01735 NZ_JAATTN010000016.1 Protein Homology CDS 9808 10350 . - 0 ID=cds-WP_024305155.1;Parent=gene-HGK48_RS01735;Dbxref=GenBank:WP_024305155.1;Name=WP_024305155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025659.7;locus_tag=HGK48_RS01735;product=DUF4376 domain-containing protein;protein_id=WP_024305155.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 10374 11054 . - . ID=gene-HGK48_RS01740;Name=HGK48_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01740 NZ_JAATTN010000016.1 Protein Homology CDS 10374 11054 . - 0 ID=cds-WP_024305156.1;Parent=gene-HGK48_RS01740;Dbxref=GenBank:WP_024305156.1;Name=WP_024305156.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024702.6;locus_tag=HGK48_RS01740;product=leucine-rich repeat protein;protein_id=WP_024305156.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 11056 11427 . - . ID=gene-HGK48_RS01745;Name=HGK48_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01745 NZ_JAATTN010000016.1 GeneMarkS-2+ CDS 11056 11427 . - 0 ID=cds-WP_065439525.1;Parent=gene-HGK48_RS01745;Dbxref=GenBank:WP_065439525.1;Name=WP_065439525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01745;product=hypothetical protein;protein_id=WP_065439525.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 11440 12885 . - . ID=gene-HGK48_RS01750;Name=HGK48_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01750 NZ_JAATTN010000016.1 GeneMarkS-2+ CDS 11440 12885 . - 0 ID=cds-WP_024305477.1;Parent=gene-HGK48_RS01750;Dbxref=GenBank:WP_024305477.1;Name=WP_024305477.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01750;product=hypothetical protein;protein_id=WP_024305477.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 12886 13473 . - . ID=gene-HGK48_RS01755;Name=HGK48_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01755 NZ_JAATTN010000016.1 GeneMarkS-2+ CDS 12886 13473 . - 0 ID=cds-WP_010404405.1;Parent=gene-HGK48_RS01755;Dbxref=GenBank:WP_010404405.1;Name=WP_010404405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01755;product=hypothetical protein;protein_id=WP_010404405.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 13473 14321 . - . ID=gene-HGK48_RS01760;Name=HGK48_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01760 NZ_JAATTN010000016.1 GeneMarkS-2+ CDS 13473 14321 . - 0 ID=cds-WP_010404408.1;Parent=gene-HGK48_RS01760;Dbxref=GenBank:WP_010404408.1;Name=WP_010404408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01760;product=hypothetical protein;protein_id=WP_010404408.1;transl_table=11 NZ_JAATTN010000016.1 RefSeq gene 14324 15054 . - . ID=gene-HGK48_RS01765;Name=HGK48_RS01765;end_range=15054,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01765;partial=true NZ_JAATTN010000016.1 Protein Homology CDS 14324 15054 . - 2 ID=cds-WP_168236654.1;Parent=gene-HGK48_RS01765;Dbxref=GenBank:WP_168236654.1;Name=WP_168236654.1;end_range=15054,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025314.6;locus_tag=HGK48_RS01765;partial=true;product=DUF4214 domain-containing protein;protein_id=WP_168236654.1;transl_table=11 ##sequence-region NZ_JAATTN010000170.1 1 3924 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000170.1 RefSeq region 1 3924 . + . ID=NZ_JAATTN010000170.1:1..3924;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000170.1 RefSeq gene 1 793 . - . ID=gene-HGK48_RS07610;Name=HGK48_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07610;partial=true;start_range=.,1 NZ_JAATTN010000170.1 Protein Homology CDS 1 793 . - 0 ID=cds-WP_168236803.1;Parent=gene-HGK48_RS07610;Dbxref=GenBank:WP_168236803.1;Name=WP_168236803.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015487.6;locus_tag=HGK48_RS07610;partial=true;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=WP_168236803.1;start_range=.,1;transl_table=11 NZ_JAATTN010000170.1 RefSeq gene 790 1530 . - . ID=gene-HGK48_RS07615;Name=HGK48_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07615 NZ_JAATTN010000170.1 Protein Homology CDS 790 1530 . - 0 ID=cds-WP_236842757.1;Parent=gene-HGK48_RS07615;Dbxref=GenBank:WP_236842757.1;Name=WP_236842757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012108065.1;locus_tag=HGK48_RS07615;product=virB8 family protein;protein_id=WP_236842757.1;transl_table=11 NZ_JAATTN010000170.1 RefSeq gene 1520 1753 . - . ID=gene-HGK48_RS07620;Name=HGK48_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07620 NZ_JAATTN010000170.1 GeneMarkS-2+ CDS 1520 1753 . - 0 ID=cds-WP_035170863.1;Parent=gene-HGK48_RS07620;Dbxref=GenBank:WP_035170863.1;Name=WP_035170863.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07620;product=hypothetical protein;protein_id=WP_035170863.1;transl_table=11 NZ_JAATTN010000170.1 RefSeq gene 1763 2782 . - . ID=gene-HGK48_RS07625;Name=HGK48_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07625 NZ_JAATTN010000170.1 Protein Homology CDS 1763 2782 . - 0 ID=cds-WP_035170864.1;Parent=gene-HGK48_RS07625;Dbxref=GenBank:WP_035170864.1;Name=WP_035170864.1;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||IEA;inference=COORDINATES: protein motif:HMM:NF016491.6;locus_tag=HGK48_RS07625;product=type IV secretion system protein;protein_id=WP_035170864.1;transl_table=11 NZ_JAATTN010000170.1 RefSeq gene 2784 3527 . - . ID=gene-HGK48_RS07630;Name=HGK48_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07630 NZ_JAATTN010000170.1 Protein Homology CDS 2784 3527 . - 0 ID=cds-WP_035170866.1;Parent=gene-HGK48_RS07630;Dbxref=GenBank:WP_035170866.1;Name=WP_035170866.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019608.6;locus_tag=HGK48_RS07630;product=type IV secretion system protein;protein_id=WP_035170866.1;transl_table=11 NZ_JAATTN010000170.1 RefSeq pseudogene 3529 3924 . - . ID=gene-HGK48_RS07635;Name=HGK48_RS07635;end_range=3924,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS07635;partial=true;pseudo=true NZ_JAATTN010000170.1 GeneMarkS-2+ CDS 3529 3924 . - 0 ID=cds-HGK48_RS07635;Parent=gene-HGK48_RS07635;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3924,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07635;partial=true;product=type IV secretion system protein VirB4;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000171.1 1 3917 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000171.1 RefSeq region 1 3917 . + . ID=NZ_JAATTN010000171.1:1..3917;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000171.1 RefSeq gene 1 603 . - . ID=gene-HGK48_RS07640;Name=cybH;gbkey=Gene;gene=cybH;gene_biotype=protein_coding;locus_tag=HGK48_RS07640;partial=true;start_range=.,1 NZ_JAATTN010000171.1 Protein Homology CDS 1 603 . - 0 ID=cds-WP_168236804.1;Parent=gene-HGK48_RS07640;Dbxref=GenBank:WP_168236804.1;Name=WP_168236804.1;Ontology_term=GO:0022904,GO:0005506,GO:0009055,GO:0016020;gbkey=CDS;gene=cybH;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849471.1;locus_tag=HGK48_RS07640;partial=true;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=WP_168236804.1;start_range=.,1;transl_table=11 NZ_JAATTN010000171.1 RefSeq gene 614 2335 . - . ID=gene-HGK48_RS07645;Name=HGK48_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07645 NZ_JAATTN010000171.1 Protein Homology CDS 614 2335 . - 0 ID=cds-WP_002849472.1;Parent=gene-HGK48_RS07645;Dbxref=GenBank:WP_002849472.1;Name=WP_002849472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849472.1;locus_tag=HGK48_RS07645;product=nickel-dependent hydrogenase large subunit;protein_id=WP_002849472.1;transl_table=11 NZ_JAATTN010000171.1 RefSeq pseudogene 2339 3492 . - . ID=gene-HGK48_RS07650;Name=HGK48_RS07650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS07650;pseudo=true NZ_JAATTN010000171.1 Protein Homology CDS 2339 3492 . - 0 ID=cds-HGK48_RS07650;Parent=gene-HGK48_RS07650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732009.1;locus_tag=HGK48_RS07650;product=hydrogenase small subunit;pseudo=true;transl_table=11 NZ_JAATTN010000171.1 RefSeq gene 3670 3917 . - . ID=gene-HGK48_RS07655;Name=HGK48_RS07655;end_range=3917,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07655;partial=true NZ_JAATTN010000171.1 Protein Homology CDS 3670 3917 . - 2 ID=cds-WP_168236805.1;Parent=gene-HGK48_RS07655;Dbxref=GenBank:WP_168236805.1;Name=WP_168236805.1;end_range=3917,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017273.6;locus_tag=HGK48_RS07655;partial=true;product=AzlD domain-containing protein;protein_id=WP_168236805.1;transl_table=11 ##sequence-region NZ_JAATTN010000172.1 1 3983 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000172.1 RefSeq region 1 3983 . + . ID=NZ_JAATTN010000172.1:1..3983;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000172.1 RefSeq gene 89 2026 . + . ID=gene-HGK48_RS07660;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=HGK48_RS07660 NZ_JAATTN010000172.1 Protein Homology CDS 89 2026 . + 0 ID=cds-WP_024305206.1;Parent=gene-HGK48_RS07660;Dbxref=GenBank:WP_024305206.1;Name=WP_024305206.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732086.1;locus_tag=HGK48_RS07660;product=NAD-dependent DNA ligase LigA;protein_id=WP_024305206.1;transl_table=11 NZ_JAATTN010000172.1 RefSeq gene 2023 2724 . + . ID=gene-HGK48_RS07665;Name=tlyA;gbkey=Gene;gene=tlyA;gene_biotype=protein_coding;locus_tag=HGK48_RS07665 NZ_JAATTN010000172.1 Protein Homology CDS 2023 2724 . + 0 ID=cds-WP_002849715.1;Parent=gene-HGK48_RS07665;Dbxref=GenBank:WP_002849715.1;Name=WP_002849715.1;Ontology_term=GO:0000451,GO:0003723,GO:0008649;gbkey=CDS;gene=tlyA;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849715.1;locus_tag=HGK48_RS07665;product=23S rRNA (cytidine-2'-O)-methyltransferase TlyA;protein_id=WP_002849715.1;transl_table=11 NZ_JAATTN010000172.1 RefSeq gene 2693 3574 . + . ID=gene-HGK48_RS07670;Name=HGK48_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07670 NZ_JAATTN010000172.1 Protein Homology CDS 2693 3574 . + 0 ID=cds-WP_002849713.1;Parent=gene-HGK48_RS07670;Dbxref=GenBank:WP_002849713.1;Name=WP_002849713.1;Ontology_term=GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732085.1;locus_tag=HGK48_RS07670;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_002849713.1;transl_table=11 NZ_JAATTN010000172.1 RefSeq gene 3571 3983 . + . ID=gene-HGK48_RS07675;Name=HGK48_RS07675;end_range=3983,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07675;partial=true NZ_JAATTN010000172.1 Protein Homology CDS 3571 3983 . + 0 ID=cds-WP_168236806.1;Parent=gene-HGK48_RS07675;Dbxref=GenBank:WP_168236806.1;Name=WP_168236806.1;end_range=3983,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849711.1;locus_tag=HGK48_RS07675;partial=true;product=methyltransferase domain-containing protein;protein_id=WP_168236806.1;transl_table=11 ##sequence-region NZ_JAATTN010000173.1 1 3938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000173.1 RefSeq region 1 3938 . + . ID=NZ_JAATTN010000173.1:1..3938;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000173.1 RefSeq gene 1 1639 . + . ID=gene-HGK48_RS07680;Name=HGK48_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07680;partial=true;start_range=.,1 NZ_JAATTN010000173.1 Protein Homology CDS 1 1639 . + 1 ID=cds-WP_168236807.1;Parent=gene-HGK48_RS07680;Dbxref=GenBank:WP_168236807.1;Name=WP_168236807.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: protein motif:HMM:NF037997.1;locus_tag=HGK48_RS07680;partial=true;product=Na/Pi cotransporter family protein;protein_id=WP_168236807.1;start_range=.,1;transl_table=11 NZ_JAATTN010000173.1 RefSeq gene 1701 1892 . + . ID=gene-HGK48_RS07685;Name=HGK48_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07685 NZ_JAATTN010000173.1 Protein Homology CDS 1701 1892 . + 0 ID=cds-WP_002850070.1;Parent=gene-HGK48_RS07685;Dbxref=GenBank:WP_002850070.1;Name=WP_002850070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850070.1;locus_tag=HGK48_RS07685;product=hypothetical protein;protein_id=WP_002850070.1;transl_table=11 NZ_JAATTN010000173.1 RefSeq gene 2194 2526 . + . ID=gene-HGK48_RS07690;Name=HGK48_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07690 NZ_JAATTN010000173.1 Protein Homology CDS 2194 2526 . + 0 ID=cds-WP_002850072.1;Parent=gene-HGK48_RS07690;Dbxref=GenBank:WP_002850072.1;Name=WP_002850072.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF016244.6;locus_tag=HGK48_RS07690;product=DUF485 domain-containing protein;protein_id=WP_002850072.1;transl_table=11 NZ_JAATTN010000173.1 RefSeq gene 2523 3938 . + . ID=gene-HGK48_RS07695;Name=HGK48_RS07695;end_range=3938,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07695;partial=true NZ_JAATTN010000173.1 Protein Homology CDS 2523 3938 . + 0 ID=cds-WP_168236808.1;Parent=gene-HGK48_RS07695;Dbxref=GenBank:WP_168236808.1;Name=WP_168236808.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=3938,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002837866.1;locus_tag=HGK48_RS07695;partial=true;product=sodium:solute symporter family transporter;protein_id=WP_168236808.1;transl_table=11 ##sequence-region NZ_JAATTN010000174.1 1 3926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000174.1 RefSeq region 1 3926 . + . ID=NZ_JAATTN010000174.1:1..3926;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000174.1 RefSeq gene 126 842 . - . ID=gene-HGK48_RS07700;Name=HGK48_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07700 NZ_JAATTN010000174.1 Protein Homology CDS 126 842 . - 0 ID=cds-WP_002850066.1;Parent=gene-HGK48_RS07700;Dbxref=GenBank:WP_002850066.1;Name=WP_002850066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850066.1;locus_tag=HGK48_RS07700;product=EI24 domain-containing protein;protein_id=WP_002850066.1;transl_table=11 NZ_JAATTN010000174.1 RefSeq gene 839 1534 . - . ID=gene-HGK48_RS07705;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=HGK48_RS07705 NZ_JAATTN010000174.1 Protein Homology CDS 839 1534 . - 0 ID=cds-WP_002850064.1;Parent=gene-HGK48_RS07705;Dbxref=GenBank:WP_002850064.1;Name=WP_002850064.1;gbkey=CDS;gene=dut;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850064.1;locus_tag=HGK48_RS07705;product=dUTPase;protein_id=WP_002850064.1;transl_table=11 NZ_JAATTN010000174.1 RefSeq gene 1590 2117 . - . ID=gene-HGK48_RS07710;Name=HGK48_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07710 NZ_JAATTN010000174.1 GeneMarkS-2+ CDS 1590 2117 . - 0 ID=cds-WP_002850062.1;Parent=gene-HGK48_RS07710;Dbxref=GenBank:WP_002850062.1;Name=WP_002850062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS07710;product=hypothetical protein;protein_id=WP_002850062.1;transl_table=11 NZ_JAATTN010000174.1 RefSeq gene 2208 2618 . + . ID=gene-HGK48_RS07715;Name=HGK48_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07715 NZ_JAATTN010000174.1 Protein Homology CDS 2208 2618 . + 0 ID=cds-WP_002850060.1;Parent=gene-HGK48_RS07715;Dbxref=GenBank:WP_002850060.1;Name=WP_002850060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850060.1;locus_tag=HGK48_RS07715;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_002850060.1;transl_table=11 NZ_JAATTN010000174.1 RefSeq gene 2625 3005 . - . ID=gene-HGK48_RS07720;Name=HGK48_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07720 NZ_JAATTN010000174.1 Protein Homology CDS 2625 3005 . - 0 ID=cds-WP_011732143.1;Parent=gene-HGK48_RS07720;Dbxref=GenBank:WP_011732143.1;Name=WP_011732143.1;Ontology_term=GO:0000160,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732143.1;locus_tag=HGK48_RS07720;product=response regulator;protein_id=WP_011732143.1;transl_table=11 NZ_JAATTN010000174.1 RefSeq gene 3012 3926 . - . ID=gene-HGK48_RS07725;Name=HGK48_RS07725;end_range=3926,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07725;partial=true NZ_JAATTN010000174.1 Protein Homology CDS 3012 3926 . - 0 ID=cds-WP_168236809.1;Parent=gene-HGK48_RS07725;Dbxref=GenBank:WP_168236809.1;Name=WP_168236809.1;Ontology_term=GO:0000160;end_range=3926,.;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.6;locus_tag=HGK48_RS07725;partial=true;product=response regulator;protein_id=WP_168236809.1;transl_table=11 ##sequence-region NZ_JAATTN010000175.1 1 3911 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000175.1 RefSeq region 1 3911 . + . ID=NZ_JAATTN010000175.1:1..3911;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000175.1 RefSeq gene 1 624 . + . ID=gene-HGK48_RS07730;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=HGK48_RS07730;partial=true;start_range=.,1 NZ_JAATTN010000175.1 Protein Homology CDS 1 624 . + 0 ID=cds-WP_168236810.1;Parent=gene-HGK48_RS07730;Dbxref=GenBank:WP_168236810.1;Name=WP_168236810.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011992462.1;locus_tag=HGK48_RS07730;partial=true;product=apolipoprotein N-acyltransferase;protein_id=WP_168236810.1;start_range=.,1;transl_table=11 NZ_JAATTN010000175.1 RefSeq gene 611 1426 . - . ID=gene-HGK48_RS07735;Name=HGK48_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07735 NZ_JAATTN010000175.1 Protein Homology CDS 611 1426 . - 0 ID=cds-WP_024305249.1;Parent=gene-HGK48_RS07735;Dbxref=GenBank:WP_024305249.1;Name=WP_024305249.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013143.6;locus_tag=HGK48_RS07735;product=metal ABC transporter permease;protein_id=WP_024305249.1;transl_table=11 NZ_JAATTN010000175.1 RefSeq gene 1407 2231 . - . ID=gene-HGK48_RS07740;Name=HGK48_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07740 NZ_JAATTN010000175.1 Protein Homology CDS 1407 2231 . - 0 ID=cds-WP_002849148.1;Parent=gene-HGK48_RS07740;Dbxref=GenBank:WP_002849148.1;Name=WP_002849148.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013143.6;locus_tag=HGK48_RS07740;product=metal ABC transporter permease;protein_id=WP_002849148.1;transl_table=11 NZ_JAATTN010000175.1 RefSeq gene 2206 3048 . - . ID=gene-HGK48_RS07745;Name=HGK48_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07745 NZ_JAATTN010000175.1 Protein Homology CDS 2206 3048 . - 0 ID=cds-WP_002849147.1;Parent=gene-HGK48_RS07745;Dbxref=GenBank:WP_002849147.1;Name=WP_002849147.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849147.1;locus_tag=HGK48_RS07745;product=metal ABC transporter ATP-binding protein;protein_id=WP_002849147.1;transl_table=11 NZ_JAATTN010000175.1 RefSeq gene 3035 3911 . - . ID=gene-HGK48_RS07750;Name=HGK48_RS07750;end_range=3911,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07750;partial=true NZ_JAATTN010000175.1 Protein Homology CDS 3035 3911 . - 1 ID=cds-WP_240944829.1;Parent=gene-HGK48_RS07750;Dbxref=GenBank:WP_240944829.1;Name=WP_240944829.1;Ontology_term=GO:0030001,GO:0005524,GO:0042626,GO:0046872,GO:0140359;end_range=3911,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: protein motif:HMM:NF013465.6;locus_tag=HGK48_RS07750;partial=true;product=metal ABC transporter substrate-binding protein;protein_id=WP_240944829.1;transl_table=11 ##sequence-region NZ_JAATTN010000176.1 1 3884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000176.1 RefSeq region 1 3884 . + . ID=NZ_JAATTN010000176.1:1..3884;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000176.1 RefSeq gene 1 700 . - . ID=gene-HGK48_RS07755;Name=HGK48_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07755;partial=true;start_range=.,1 NZ_JAATTN010000176.1 Protein Homology CDS 1 700 . - 0 ID=cds-WP_168236811.1;Parent=gene-HGK48_RS07755;Dbxref=GenBank:WP_168236811.1;Name=WP_168236811.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849987.1;locus_tag=HGK48_RS07755;partial=true;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_168236811.1;start_range=.,1;transl_table=11 NZ_JAATTN010000176.1 RefSeq gene 693 1412 . - . ID=gene-HGK48_RS07760;Name=HGK48_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07760 NZ_JAATTN010000176.1 Protein Homology CDS 693 1412 . - 0 ID=cds-WP_002849986.1;Parent=gene-HGK48_RS07760;Dbxref=GenBank:WP_002849986.1;Name=WP_002849986.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849986.1;locus_tag=HGK48_RS07760;product=amino acid ABC transporter permease;protein_id=WP_002849986.1;transl_table=11 NZ_JAATTN010000176.1 RefSeq pseudogene 1396 3492 . - . ID=gene-HGK48_RS07765;Name=HGK48_RS07765;end_range=3492,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS07765;partial=true;pseudo=true NZ_JAATTN010000176.1 Protein Homology CDS 1396 3492 . - 0 ID=cds-HGK48_RS07765;Parent=gene-HGK48_RS07765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002829789.1;locus_tag=HGK48_RS07765;partial=true;product=hemagglutinin repeat-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000177.1 1 3862 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000177.1 RefSeq region 1 3862 . + . ID=NZ_JAATTN010000177.1:1..3862;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000177.1 RefSeq gene 1 699 . - . ID=gene-HGK48_RS07770;Name=HGK48_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07770;partial=true;start_range=.,1 NZ_JAATTN010000177.1 Protein Homology CDS 1 699 . - 0 ID=cds-WP_168236814.1;Parent=gene-HGK48_RS07770;Dbxref=GenBank:WP_168236814.1;Name=WP_168236814.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=HGK48_RS07770;partial=true;product=glycosyltransferase;protein_id=WP_168236814.1;start_range=.,1;transl_table=11 NZ_JAATTN010000177.1 RefSeq gene 699 1868 . - . ID=gene-HGK48_RS07775;Name=HGK48_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07775 NZ_JAATTN010000177.1 Protein Homology CDS 699 1868 . - 0 ID=cds-WP_024305502.1;Parent=gene-HGK48_RS07775;Dbxref=GenBank:WP_024305502.1;Name=WP_024305502.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849404.1;locus_tag=HGK48_RS07775;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_024305502.1;transl_table=11 NZ_JAATTN010000177.1 RefSeq gene 1874 2569 . - . ID=gene-HGK48_RS07780;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=HGK48_RS07780 NZ_JAATTN010000177.1 Protein Homology CDS 1874 2569 . - 0 ID=cds-WP_002849403.1;Parent=gene-HGK48_RS07780;Dbxref=GenBank:WP_002849403.1;Name=WP_002849403.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849403.1;locus_tag=HGK48_RS07780;product=serine O-acetyltransferase;protein_id=WP_002849403.1;transl_table=11 NZ_JAATTN010000177.1 RefSeq gene 2573 3862 . - . ID=gene-HGK48_RS07785;Name=speA;end_range=3862,.;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=HGK48_RS07785;partial=true NZ_JAATTN010000177.1 Protein Homology CDS 2573 3862 . - 0 ID=cds-WP_168236815.1;Parent=gene-HGK48_RS07785;Dbxref=GenBank:WP_168236815.1;Name=WP_168236815.1;Ontology_term=GO:0006527,GO:0008792;end_range=3862,.;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344171.1;locus_tag=HGK48_RS07785;partial=true;product=biosynthetic arginine decarboxylase;protein_id=WP_168236815.1;transl_table=11 ##sequence-region NZ_JAATTN010000178.1 1 3856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000178.1 RefSeq region 1 3856 . + . ID=NZ_JAATTN010000178.1:1..3856;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000178.1 RefSeq gene 116 892 . + . ID=gene-HGK48_RS07790;Name=HGK48_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07790 NZ_JAATTN010000178.1 Protein Homology CDS 116 892 . + 0 ID=cds-WP_011731807.1;Parent=gene-HGK48_RS07790;Dbxref=GenBank:WP_011731807.1;Name=WP_011731807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731807.1;locus_tag=HGK48_RS07790;product=fumarate reductase cytochrome b subunit;protein_id=WP_011731807.1;transl_table=11 NZ_JAATTN010000178.1 RefSeq gene 889 2877 . + . ID=gene-HGK48_RS07795;Name=HGK48_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07795 NZ_JAATTN010000178.1 Protein Homology CDS 889 2877 . + 0 ID=cds-WP_002848620.1;Parent=gene-HGK48_RS07795;Dbxref=GenBank:WP_002848620.1;Name=WP_002848620.1;Ontology_term=GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343846.1;locus_tag=HGK48_RS07795;product=fumarate reductase flavoprotein subunit;protein_id=WP_002848620.1;transl_table=11 NZ_JAATTN010000178.1 RefSeq gene 2870 3589 . + . ID=gene-HGK48_RS07800;Name=HGK48_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07800 NZ_JAATTN010000178.1 Protein Homology CDS 2870 3589 . + 0 ID=cds-WP_024305382.1;Parent=gene-HGK48_RS07800;Dbxref=GenBank:WP_024305382.1;Name=WP_024305382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009650540.1;locus_tag=HGK48_RS07800;product=fumarate reductase iron-sulfur subunit;protein_id=WP_024305382.1;transl_table=11 ##sequence-region NZ_JAATTN010000179.1 1 3792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000179.1 RefSeq region 1 3792 . + . ID=NZ_JAATTN010000179.1:1..3792;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000179.1 RefSeq gene 1 539 . + . ID=gene-HGK48_RS07805;Name=HGK48_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07805;partial=true;start_range=.,1 NZ_JAATTN010000179.1 Protein Homology CDS 1 539 . + 2 ID=cds-WP_168236816.1;Parent=gene-HGK48_RS07805;Dbxref=GenBank:WP_168236816.1;Name=WP_168236816.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF013257.6;locus_tag=HGK48_RS07805;partial=true;product=glycosyltransferase family 9 protein;protein_id=WP_168236816.1;start_range=.,1;transl_table=11 NZ_JAATTN010000179.1 RefSeq gene 543 1775 . + . ID=gene-HGK48_RS07810;Name=HGK48_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07810 NZ_JAATTN010000179.1 Protein Homology CDS 543 1775 . + 0 ID=cds-WP_002850677.1;Parent=gene-HGK48_RS07810;Dbxref=GenBank:WP_002850677.1;Name=WP_002850677.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=HGK48_RS07810;product=glycosyltransferase family 2 protein;protein_id=WP_002850677.1;transl_table=11 NZ_JAATTN010000179.1 RefSeq gene 1772 2233 . + . ID=gene-HGK48_RS11265;Name=HGK48_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11265 NZ_JAATTN010000179.1 Protein Homology CDS 1772 2233 . + 0 ID=cds-WP_240944830.1;Parent=gene-HGK48_RS11265;Dbxref=GenBank:WP_240944830.1;Name=WP_240944830.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=HGK48_RS11265;product=class I SAM-dependent methyltransferase;protein_id=WP_240944830.1;transl_table=11 NZ_JAATTN010000179.1 RefSeq gene 2221 2637 . + . ID=gene-HGK48_RS11270;Name=HGK48_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11270 NZ_JAATTN010000179.1 GeneMarkS-2+ CDS 2221 2637 . + 0 ID=cds-WP_224727762.1;Parent=gene-HGK48_RS11270;Dbxref=GenBank:WP_224727762.1;Name=WP_224727762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11270;product=hypothetical protein;protein_id=WP_224727762.1;transl_table=11 NZ_JAATTN010000179.1 RefSeq gene 2630 3792 . + . ID=gene-HGK48_RS07820;Name=asnB;end_range=3792,.;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=HGK48_RS07820;partial=true NZ_JAATTN010000179.1 Protein Homology CDS 2630 3792 . + 0 ID=cds-WP_168236817.1;Parent=gene-HGK48_RS07820;Dbxref=GenBank:WP_168236817.1;Name=WP_168236817.1;Ontology_term=GO:0070981,GO:0004066;end_range=3792,.;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: protein motif:HMM:TIGR01536.1;locus_tag=HGK48_RS07820;partial=true;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_168236817.1;transl_table=11 ##sequence-region NZ_JAATTN010000017.1 1 14774 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000017.1 RefSeq region 1 14774 . + . ID=NZ_JAATTN010000017.1:1..14774;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000017.1 RefSeq pseudogene 1 692 . + . ID=gene-HGK48_RS01770;Name=HGK48_RS01770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS01770;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000017.1 Protein Homology CDS 1 692 . + 2 ID=cds-HGK48_RS01770;Parent=gene-HGK48_RS01770;Note=back-translocating Elongation Factor EF4%3B binds to the ribosome on the universally-conserved alpha-sarcin loop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344425.1;locus_tag=HGK48_RS01770;partial=true;product=elongation factor 4;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 723 938 . + . ID=gene-HGK48_RS01775;Name=HGK48_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01775 NZ_JAATTN010000017.1 Protein Homology CDS 723 938 . + 0 ID=cds-WP_002850445.1;Parent=gene-HGK48_RS01775;Dbxref=GenBank:WP_002850445.1;Name=WP_002850445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850445.1;locus_tag=HGK48_RS01775;product=tautomerase family protein;protein_id=WP_002850445.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 935 1606 . + . ID=gene-HGK48_RS01780;Name=HGK48_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01780 NZ_JAATTN010000017.1 GeneMarkS-2+ CDS 935 1606 . + 0 ID=cds-WP_002850443.1;Parent=gene-HGK48_RS01780;Dbxref=GenBank:WP_002850443.1;Name=WP_002850443.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01780;product=hypothetical protein;protein_id=WP_002850443.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 1616 2164 . + . ID=gene-HGK48_RS01785;Name=HGK48_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01785 NZ_JAATTN010000017.1 GeneMarkS-2+ CDS 1616 2164 . + 0 ID=cds-WP_002850441.1;Parent=gene-HGK48_RS01785;Dbxref=GenBank:WP_002850441.1;Name=WP_002850441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01785;product=YajG family lipoprotein;protein_id=WP_002850441.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 2164 2733 . + . ID=gene-HGK48_RS01790;Name=HGK48_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01790 NZ_JAATTN010000017.1 Protein Homology CDS 2164 2733 . + 0 ID=cds-WP_011732219.1;Parent=gene-HGK48_RS01790;Dbxref=GenBank:WP_011732219.1;Name=WP_011732219.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732219.1;locus_tag=HGK48_RS01790;product=ComF family protein;protein_id=WP_011732219.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq pseudogene 2743 4018 . + . ID=gene-HGK48_RS01795;Name=HGK48_RS01795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS01795;pseudo=true NZ_JAATTN010000017.1 Protein Homology CDS 2743 4018 . + 0 ID=cds-HGK48_RS01795;Parent=gene-HGK48_RS01795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850437.1;locus_tag=HGK48_RS01795;product=DUF4910 domain-containing protein;pseudo=true;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 4015 5499 . + . ID=gene-HGK48_RS01800;Name=HGK48_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01800 NZ_JAATTN010000017.1 Protein Homology CDS 4015 5499 . + 0 ID=cds-WP_024305287.1;Parent=gene-HGK48_RS01800;Dbxref=GenBank:WP_024305287.1;Name=WP_024305287.1;Ontology_term=GO:0043038,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=amino acid activation|0043038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002830559.1;locus_tag=HGK48_RS01800;product=amino acid adenylation domain-containing protein;protein_id=WP_024305287.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 5486 6223 . + . ID=gene-HGK48_RS01805;Name=HGK48_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01805 NZ_JAATTN010000017.1 Protein Homology CDS 5486 6223 . + 0 ID=cds-WP_002850435.1;Parent=gene-HGK48_RS01805;Dbxref=GenBank:WP_002850435.1;Name=WP_002850435.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012792.6;locus_tag=HGK48_RS01805;product=GNAT family N-acetyltransferase;protein_id=WP_002850435.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 6361 6585 . + . ID=gene-HGK48_RS01810;Name=HGK48_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01810 NZ_JAATTN010000017.1 Protein Homology CDS 6361 6585 . + 0 ID=cds-WP_002850433.1;Parent=gene-HGK48_RS01810;Dbxref=GenBank:WP_002850433.1;Name=WP_002850433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850433.1;locus_tag=HGK48_RS01810;product=hypothetical protein;protein_id=WP_002850433.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 6582 7358 . + . ID=gene-HGK48_RS01815;Name=HGK48_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01815 NZ_JAATTN010000017.1 Protein Homology CDS 6582 7358 . + 0 ID=cds-WP_002850431.1;Parent=gene-HGK48_RS01815;Dbxref=GenBank:WP_002850431.1;Name=WP_002850431.1;Ontology_term=GO:0046677,GO:0046353;gbkey=CDS;go_function=aminoglycoside 3-N-acetyltransferase activity|0046353||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850431.1;locus_tag=HGK48_RS01815;product=AAC(3) family N-acetyltransferase;protein_id=WP_002850431.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 7473 10061 . + . ID=gene-HGK48_RS01820;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=HGK48_RS01820 NZ_JAATTN010000017.1 Protein Homology CDS 7473 10061 . + 0 ID=cds-WP_011732215.1;Parent=gene-HGK48_RS01820;Dbxref=GenBank:WP_011732215.1;Name=WP_011732215.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732215.1;locus_tag=HGK48_RS01820;product=DNA gyrase subunit A;protein_id=WP_011732215.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 10103 10588 . + . ID=gene-HGK48_RS01825;Name=HGK48_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01825 NZ_JAATTN010000017.1 Protein Homology CDS 10103 10588 . + 0 ID=cds-WP_002850428.1;Parent=gene-HGK48_RS01825;Dbxref=GenBank:WP_002850428.1;Name=WP_002850428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516783.1;locus_tag=HGK48_RS01825;product=LPP20 family lipoprotein;protein_id=WP_002850428.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 10564 10953 . + . ID=gene-HGK48_RS01830;Name=HGK48_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01830 NZ_JAATTN010000017.1 GeneMarkS-2+ CDS 10564 10953 . + 0 ID=cds-WP_010398974.1;Parent=gene-HGK48_RS01830;Dbxref=GenBank:WP_010398974.1;Name=WP_010398974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01830;product=hypothetical protein;protein_id=WP_010398974.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 10958 12100 . + . ID=gene-HGK48_RS01835;Name=HGK48_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01835 NZ_JAATTN010000017.1 Protein Homology CDS 10958 12100 . + 0 ID=cds-WP_002850424.1;Parent=gene-HGK48_RS01835;Dbxref=GenBank:WP_002850424.1;Name=WP_002850424.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850424.1;locus_tag=HGK48_RS01835;product=sigma-54-dependent transcriptional regulator;protein_id=WP_002850424.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 12165 13193 . + . ID=gene-HGK48_RS01840;Name=HGK48_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01840 NZ_JAATTN010000017.1 Protein Homology CDS 12165 13193 . + 0 ID=cds-WP_002850422.1;Parent=gene-HGK48_RS01840;Dbxref=GenBank:WP_002850422.1;Name=WP_002850422.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850422.1;locus_tag=HGK48_RS01840;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002850422.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 13268 13777 . + . ID=gene-HGK48_RS01845;Name=HGK48_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01845 NZ_JAATTN010000017.1 Protein Homology CDS 13268 13777 . + 0 ID=cds-WP_002850421.1;Parent=gene-HGK48_RS01845;Dbxref=GenBank:WP_002850421.1;Name=WP_002850421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850421.1;locus_tag=HGK48_RS01845;product=YqhA family protein;protein_id=WP_002850421.1;transl_table=11 NZ_JAATTN010000017.1 RefSeq gene 13798 14774 . + . ID=gene-HGK48_RS01850;Name=hemE;end_range=14774,.;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=HGK48_RS01850;partial=true NZ_JAATTN010000017.1 Protein Homology CDS 13798 14774 . + 0 ID=cds-WP_168236655.1;Parent=gene-HGK48_RS01850;Dbxref=GenBank:WP_168236655.1;Name=WP_168236655.1;Ontology_term=GO:0006779,GO:0004853;end_range=14774,.;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011992594.1;locus_tag=HGK48_RS01850;partial=true;product=uroporphyrinogen decarboxylase;protein_id=WP_168236655.1;transl_table=11 ##sequence-region NZ_JAATTN010000180.1 1 3714 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000180.1 RefSeq region 1 3714 . + . ID=NZ_JAATTN010000180.1:1..3714;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000180.1 RefSeq gene 1 384 . - . ID=gene-HGK48_RS07825;Name=HGK48_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07825;partial=true;start_range=.,1 NZ_JAATTN010000180.1 Protein Homology CDS 1 384 . - 0 ID=cds-WP_206120311.1;Parent=gene-HGK48_RS07825;Dbxref=GenBank:WP_206120311.1;Name=WP_206120311.1;Ontology_term=GO:0070567;gbkey=CDS;go_function=cytidylyltransferase activity|0070567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848609.1;locus_tag=HGK48_RS07825;partial=true;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_206120311.1;start_range=.,1;transl_table=11 NZ_JAATTN010000180.1 RefSeq gene 536 1888 . + . ID=gene-HGK48_RS07830;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=HGK48_RS07830 NZ_JAATTN010000180.1 Protein Homology CDS 536 1888 . + 0 ID=cds-WP_002848611.1;Parent=gene-HGK48_RS07830;Dbxref=GenBank:WP_002848611.1;Name=WP_002848611.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731805.1;locus_tag=HGK48_RS07830;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_002848611.1;transl_table=11 NZ_JAATTN010000180.1 RefSeq gene 1885 2961 . + . ID=gene-HGK48_RS07835;Name=HGK48_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07835 NZ_JAATTN010000180.1 Protein Homology CDS 1885 2961 . + 0 ID=cds-WP_002848612.1;Parent=gene-HGK48_RS07835;Dbxref=GenBank:WP_002848612.1;Name=WP_002848612.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0046872,GO:0051536,GO:0140663;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,ATP-dependent FeS chaperone activity|0140663||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848612.1;locus_tag=HGK48_RS07835;product=Mrp/NBP35 family ATP-binding protein;protein_id=WP_002848612.1;transl_table=11 NZ_JAATTN010000180.1 RefSeq gene 3182 3714 . + . ID=gene-HGK48_RS07840;Name=HGK48_RS07840;end_range=3714,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07840;partial=true NZ_JAATTN010000180.1 Protein Homology CDS 3182 3714 . + 0 ID=cds-WP_206120312.1;Parent=gene-HGK48_RS07840;Dbxref=GenBank:WP_206120312.1;Name=WP_206120312.1;end_range=3714,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848614.1;locus_tag=HGK48_RS07840;partial=true;product=tetrahydrodipicolinate N-succinyltransferase N-terminal domain-containing protein;protein_id=WP_206120312.1;transl_table=11 ##sequence-region NZ_JAATTN010000181.1 1 3783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000181.1 RefSeq region 1 3783 . + . ID=NZ_JAATTN010000181.1:1..3783;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000181.1 RefSeq gene 43 480 . + . ID=gene-HGK48_RS07845;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=HGK48_RS07845 NZ_JAATTN010000181.1 Protein Homology CDS 43 480 . + 0 ID=cds-WP_002850727.1;Parent=gene-HGK48_RS07845;Dbxref=GenBank:WP_002850727.1;Name=WP_002850727.1;Ontology_term=GO:0055085,GO:0015078,GO:0016020;gbkey=CDS;gene=exbB;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850727.1;locus_tag=HGK48_RS07845;product=TonB-system energizer ExbB;protein_id=WP_002850727.1;transl_table=11 NZ_JAATTN010000181.1 RefSeq gene 464 853 . + . ID=gene-HGK48_RS07850;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=HGK48_RS07850 NZ_JAATTN010000181.1 Protein Homology CDS 464 853 . + 0 ID=cds-WP_002850728.1;Parent=gene-HGK48_RS07850;Dbxref=GenBank:WP_002850728.1;Name=WP_002850728.1;Ontology_term=GO:0006810,GO:0015291,GO:0016020;gbkey=CDS;gene=exbD;go_component=membrane|0016020||IEA;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851470.1;locus_tag=HGK48_RS07850;product=TonB system transport protein ExbD;protein_id=WP_002850728.1;transl_table=11 NZ_JAATTN010000181.1 RefSeq gene 850 1575 . + . ID=gene-HGK48_RS07855;Name=HGK48_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07855 NZ_JAATTN010000181.1 Protein Homology CDS 850 1575 . + 0 ID=cds-WP_051119547.1;Parent=gene-HGK48_RS07855;Dbxref=GenBank:WP_051119547.1;Name=WP_051119547.1;Ontology_term=GO:0015031,GO:0015891,GO:0055085,GO:0031992,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=energy transducer activity|0031992||IEA;go_process=protein transport|0015031||IEA,siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024503.6;locus_tag=HGK48_RS07855;product=energy transducer TonB;protein_id=WP_051119547.1;transl_table=11 NZ_JAATTN010000181.1 RefSeq gene 1710 3245 . + . ID=gene-HGK48_RS07860;Name=HGK48_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07860 NZ_JAATTN010000181.1 Protein Homology CDS 1710 3245 . + 0 ID=cds-WP_024305179.1;Parent=gene-HGK48_RS07860;Dbxref=GenBank:WP_024305179.1;Name=WP_024305179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732301.1;locus_tag=HGK48_RS07860;product=ABC transporter substrate-binding protein;protein_id=WP_024305179.1;transl_table=11 NZ_JAATTN010000181.1 RefSeq gene 3245 3783 . + . ID=gene-HGK48_RS07865;Name=HGK48_RS07865;end_range=3783,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07865;partial=true NZ_JAATTN010000181.1 Protein Homology CDS 3245 3783 . + 0 ID=cds-WP_168236818.1;Parent=gene-HGK48_RS07865;Dbxref=GenBank:WP_168236818.1;Name=WP_168236818.1;Ontology_term=GO:0055085;end_range=3783,.;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850729.1;locus_tag=HGK48_RS07865;partial=true;product=ABC transporter permease family protein;protein_id=WP_168236818.1;transl_table=11 ##sequence-region NZ_JAATTN010000182.1 1 3756 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000182.1 RefSeq region 1 3756 . + . ID=NZ_JAATTN010000182.1:1..3756;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000182.1 RefSeq gene 48 2105 . + . ID=gene-HGK48_RS07870;Name=HGK48_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07870 NZ_JAATTN010000182.1 Protein Homology CDS 48 2105 . + 0 ID=cds-WP_002849133.1;Parent=gene-HGK48_RS07870;Dbxref=GenBank:WP_002849133.1;Name=WP_002849133.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018136540.1;locus_tag=HGK48_RS07870;product=UvrD-helicase domain-containing protein;protein_id=WP_002849133.1;transl_table=11 NZ_JAATTN010000182.1 RefSeq gene 2102 2938 . + . ID=gene-HGK48_RS07875;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=HGK48_RS07875 NZ_JAATTN010000182.1 Protein Homology CDS 2102 2938 . + 0 ID=cds-WP_002849132.1;Parent=gene-HGK48_RS07875;Dbxref=GenBank:WP_002849132.1;Name=WP_002849132.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849132.1;locus_tag=HGK48_RS07875;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_002849132.1;transl_table=11 NZ_JAATTN010000182.1 RefSeq gene 2922 3149 . + . ID=gene-HGK48_RS07880;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=HGK48_RS07880 NZ_JAATTN010000182.1 Protein Homology CDS 2922 3149 . + 0 ID=cds-WP_002849131.1;Parent=gene-HGK48_RS07880;Dbxref=GenBank:WP_002849131.1;Name=WP_002849131.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002852854.1;locus_tag=HGK48_RS07880;product=carbon storage regulator CsrA;protein_id=WP_002849131.1;transl_table=11 NZ_JAATTN010000182.1 RefSeq gene 3146 3756 . + . ID=gene-HGK48_RS07885;Name=HGK48_RS07885;end_range=3756,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07885;partial=true NZ_JAATTN010000182.1 Protein Homology CDS 3146 3756 . + 0 ID=cds-WP_168236819.1;Parent=gene-HGK48_RS07885;Dbxref=GenBank:WP_168236819.1;Name=WP_168236819.1;Ontology_term=GO:0016114,GO:0005524,GO:0050515;end_range=3756,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849129.1;locus_tag=HGK48_RS07885;partial=true;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_168236819.1;transl_table=11 ##sequence-region NZ_JAATTN010000183.1 1 3670 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000183.1 RefSeq region 1 3670 . + . ID=NZ_JAATTN010000183.1:1..3670;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000183.1 RefSeq gene 1 670 . + . ID=gene-HGK48_RS07890;Name=HGK48_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07890;partial=true;start_range=.,1 NZ_JAATTN010000183.1 Protein Homology CDS 1 670 . + 1 ID=cds-WP_168236820.1;Parent=gene-HGK48_RS07890;Dbxref=GenBank:WP_168236820.1;Name=WP_168236820.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.6;locus_tag=HGK48_RS07890;partial=true;product=glycosyltransferase;protein_id=WP_168236820.1;start_range=.,1;transl_table=11 NZ_JAATTN010000183.1 RefSeq gene 667 1788 . + . ID=gene-HGK48_RS07895;Name=pglJ;gbkey=Gene;gene=pglJ;gene_biotype=protein_coding;locus_tag=HGK48_RS07895 NZ_JAATTN010000183.1 Protein Homology CDS 667 1788 . + 0 ID=cds-WP_002850226.1;Parent=gene-HGK48_RS07895;Dbxref=GenBank:WP_002850226.1;Name=WP_002850226.1;Ontology_term=GO:0009103,GO:0018279,GO:0016758;gbkey=CDS;gene=pglJ;go_function=hexosyltransferase activity|0016758||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,protein N-linked glycosylation via asparagine|0018279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850226.1;locus_tag=HGK48_RS07895;product=N-acetylgalactosamine-N%2CN'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase;protein_id=WP_002850226.1;transl_table=11 NZ_JAATTN010000183.1 RefSeq gene 1772 3670 . + . ID=gene-HGK48_RS07900;Name=HGK48_RS07900;end_range=3670,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07900;partial=true NZ_JAATTN010000183.1 Protein Homology CDS 1772 3670 . + 0 ID=cds-WP_168236821.1;Parent=gene-HGK48_RS07900;Dbxref=GenBank:WP_168236821.1;Name=WP_168236821.1;Ontology_term=GO:0009101,GO:0004576,GO:0016020;end_range=3670,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligosaccharyl transferase activity|0004576||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732181.1;locus_tag=HGK48_RS07900;partial=true;product=STT3 domain-containing protein;protein_id=WP_168236821.1;transl_table=11 ##sequence-region NZ_JAATTN010000184.1 1 3718 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000184.1 RefSeq region 1 3718 . + . ID=NZ_JAATTN010000184.1:1..3718;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000184.1 RefSeq gene 84 1532 . - . ID=gene-HGK48_RS07905;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=HGK48_RS07905 NZ_JAATTN010000184.1 Protein Homology CDS 84 1532 . - 0 ID=cds-WP_002848049.1;Parent=gene-HGK48_RS07905;Dbxref=GenBank:WP_002848049.1;Name=WP_002848049.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848049.1;locus_tag=HGK48_RS07905;product=aldehyde dehydrogenase;protein_id=WP_002848049.1;transl_table=11 NZ_JAATTN010000184.1 RefSeq gene 1681 3582 . - . ID=gene-HGK48_RS07910;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=HGK48_RS07910 NZ_JAATTN010000184.1 Protein Homology CDS 1681 3582 . - 0 ID=cds-WP_002848048.1;Parent=gene-HGK48_RS07910;Dbxref=GenBank:WP_002848048.1;Name=WP_002848048.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011992840.1;locus_tag=HGK48_RS07910;product=transketolase;protein_id=WP_002848048.1;transl_table=11 ##sequence-region NZ_JAATTN010000185.1 1 3707 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000185.1 RefSeq region 1 3707 . + . ID=NZ_JAATTN010000185.1:1..3707;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000185.1 RefSeq gene 1 638 . + . ID=gene-HGK48_RS07920;Name=HGK48_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07920;partial=true;start_range=.,1 NZ_JAATTN010000185.1 Protein Homology CDS 1 638 . + 2 ID=cds-WP_168236822.1;Parent=gene-HGK48_RS07920;Dbxref=GenBank:WP_168236822.1;Name=WP_168236822.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849885.1;locus_tag=HGK48_RS07920;partial=true;product=FtsX-like permease family protein;protein_id=WP_168236822.1;start_range=.,1;transl_table=11 NZ_JAATTN010000185.1 RefSeq gene 635 1840 . + . ID=gene-HGK48_RS07925;Name=HGK48_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07925 NZ_JAATTN010000185.1 Protein Homology CDS 635 1840 . + 0 ID=cds-WP_024305465.1;Parent=gene-HGK48_RS07925;Dbxref=GenBank:WP_024305465.1;Name=WP_024305465.1;Ontology_term=GO:0006508,GO:0004222,GO:0016787,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002780919.1;locus_tag=HGK48_RS07925;product=murein hydrolase activator EnvC family protein;protein_id=WP_024305465.1;transl_table=11 NZ_JAATTN010000185.1 RefSeq gene 1896 2612 . + . ID=gene-HGK48_RS07930;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=HGK48_RS07930 NZ_JAATTN010000185.1 Protein Homology CDS 1896 2612 . + 0 ID=cds-WP_002849882.1;Parent=gene-HGK48_RS07930;Dbxref=GenBank:WP_002849882.1;Name=WP_002849882.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849882.1;locus_tag=HGK48_RS07930;product=UMP kinase;protein_id=WP_002849882.1;transl_table=11 NZ_JAATTN010000185.1 RefSeq gene 2625 2846 . + . ID=gene-HGK48_RS07935;Name=HGK48_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07935 NZ_JAATTN010000185.1 Protein Homology CDS 2625 2846 . + 0 ID=cds-WP_002849881.1;Parent=gene-HGK48_RS07935;Dbxref=GenBank:WP_002849881.1;Name=WP_002849881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849881.1;locus_tag=HGK48_RS07935;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_002849881.1;transl_table=11 NZ_JAATTN010000185.1 RefSeq gene 2944 3707 . + . ID=gene-HGK48_RS07940;Name=HGK48_RS07940;end_range=3707,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07940;partial=true NZ_JAATTN010000185.1 Protein Homology CDS 2944 3707 . + 0 ID=cds-WP_394352682.1;Parent=gene-HGK48_RS07940;Dbxref=GenBank:WP_394352682.1;Name=WP_394352682.1;end_range=3707,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849880.1;locus_tag=HGK48_RS07940;partial=true;product=HD domain-containing protein;protein_id=WP_394352682.1;transl_table=11 ##sequence-region NZ_JAATTN010000186.1 1 3698 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000186.1 RefSeq region 1 3698 . + . ID=NZ_JAATTN010000186.1:1..3698;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000186.1 RefSeq pseudogene 93 479 . + . ID=gene-HGK48_RS11570;Name=HGK48_RS11570;end_range=479,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11570;partial=true;pseudo=true NZ_JAATTN010000186.1 Protein Homology CDS 93 479 . + 0 ID=cds-HGK48_RS11570;Parent=gene-HGK48_RS11570;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=479,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024140.6;locus_tag=HGK48_RS11570;partial=true;product=MCP four helix bundle domain-containing protein;pseudo=true;transl_table=11 NZ_JAATTN010000186.1 RefSeq pseudogene 1356 1754 . + . ID=gene-HGK48_RS11575;Name=HGK48_RS11575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11575;partial=true;pseudo=true;start_range=.,1356 NZ_JAATTN010000186.1 Protein Homology CDS 1356 1754 . + 0 ID=cds-HGK48_RS11575;Parent=gene-HGK48_RS11575;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=HGK48_RS11575;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,1356;transl_table=11 NZ_JAATTN010000186.1 RefSeq gene 1928 2911 . + . ID=gene-HGK48_RS07950;Name=HGK48_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07950 NZ_JAATTN010000186.1 Protein Homology CDS 1928 2911 . + 0 ID=cds-WP_002849925.1;Parent=gene-HGK48_RS07950;Dbxref=GenBank:WP_002849925.1;Name=WP_002849925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849925.1;locus_tag=HGK48_RS07950;product=cation diffusion facilitator family transporter;protein_id=WP_002849925.1;transl_table=11 NZ_JAATTN010000186.1 RefSeq gene 3015 3650 . - . ID=gene-HGK48_RS07955;Name=HGK48_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07955 NZ_JAATTN010000186.1 Protein Homology CDS 3015 3650 . - 0 ID=cds-WP_168236824.1;Parent=gene-HGK48_RS07955;Dbxref=GenBank:WP_168236824.1;Name=WP_168236824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849923.1;locus_tag=HGK48_RS07955;product=NAD(P)H-binding protein;protein_id=WP_168236824.1;transl_table=11 ##sequence-region NZ_JAATTN010000187.1 1 3697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000187.1 RefSeq region 1 3697 . + . ID=NZ_JAATTN010000187.1:1..3697;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000187.1 RefSeq gene 1 668 . - . ID=gene-HGK48_RS07960;Name=HGK48_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07960;partial=true;start_range=.,1 NZ_JAATTN010000187.1 Protein Homology CDS 1 668 . - 0 ID=cds-WP_457550917.1;Parent=gene-HGK48_RS07960;Dbxref=GenBank:WP_457550917.1;Name=WP_457550917.1;Ontology_term=GO:0006352,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849349.1;locus_tag=HGK48_RS07960;partial=true;product=RNA polymerase factor sigma-54;protein_id=WP_457550917.1;start_range=.,1;transl_table=11 NZ_JAATTN010000187.1 RefSeq gene 668 1396 . - . ID=gene-HGK48_RS07965;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=HGK48_RS07965 NZ_JAATTN010000187.1 Protein Homology CDS 668 1396 . - 0 ID=cds-WP_002849347.1;Parent=gene-HGK48_RS07965;Dbxref=GenBank:WP_002849347.1;Name=WP_002849347.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344092.1;locus_tag=HGK48_RS07965;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002849347.1;transl_table=11 NZ_JAATTN010000187.1 RefSeq gene 1389 1790 . - . ID=gene-HGK48_RS07970;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=HGK48_RS07970 NZ_JAATTN010000187.1 Protein Homology CDS 1389 1790 . - 0 ID=cds-WP_002849345.1;Parent=gene-HGK48_RS07970;Dbxref=GenBank:WP_002849345.1;Name=WP_002849345.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849345.1;locus_tag=HGK48_RS07970;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_002849345.1;transl_table=11 NZ_JAATTN010000187.1 RefSeq gene 1774 2019 . - . ID=gene-HGK48_RS07975;Name=HGK48_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07975 NZ_JAATTN010000187.1 Protein Homology CDS 1774 2019 . - 0 ID=cds-WP_002849343.1;Parent=gene-HGK48_RS07975;Dbxref=GenBank:WP_002849343.1;Name=WP_002849343.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018136355.1;locus_tag=HGK48_RS07975;product=RNA-binding S4 domain-containing protein;protein_id=WP_002849343.1;transl_table=11 NZ_JAATTN010000187.1 RefSeq gene 2057 2806 . - . ID=gene-HGK48_RS07980;Name=HGK48_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07980 NZ_JAATTN010000187.1 Protein Homology CDS 2057 2806 . - 0 ID=cds-WP_002849342.1;Parent=gene-HGK48_RS07980;Dbxref=GenBank:WP_002849342.1;Name=WP_002849342.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:NF024503.6;locus_tag=HGK48_RS07980;product=energy transducer TonB;protein_id=WP_002849342.1;transl_table=11 NZ_JAATTN010000187.1 RefSeq gene 2799 3185 . - . ID=gene-HGK48_RS07985;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=HGK48_RS07985 NZ_JAATTN010000187.1 Protein Homology CDS 2799 3185 . - 0 ID=cds-WP_002849340.1;Parent=gene-HGK48_RS07985;Dbxref=GenBank:WP_002849340.1;Name=WP_002849340.1;Ontology_term=GO:0006810,GO:0015291,GO:0016020;gbkey=CDS;gene=exbD;go_component=membrane|0016020||IEA;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849340.1;locus_tag=HGK48_RS07985;product=TonB system transport protein ExbD;protein_id=WP_002849340.1;transl_table=11 NZ_JAATTN010000187.1 RefSeq gene 3188 3601 . - . ID=gene-HGK48_RS07990;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=HGK48_RS07990 NZ_JAATTN010000187.1 Protein Homology CDS 3188 3601 . - 0 ID=cds-WP_002849338.1;Parent=gene-HGK48_RS07990;Dbxref=GenBank:WP_002849338.1;Name=WP_002849338.1;Ontology_term=GO:0055085,GO:0015078,GO:0016020;gbkey=CDS;gene=exbB;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849338.1;locus_tag=HGK48_RS07990;product=TonB-system energizer ExbB;protein_id=WP_002849338.1;transl_table=11 ##sequence-region NZ_JAATTN010000188.1 1 3697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000188.1 RefSeq region 1 3697 . + . ID=NZ_JAATTN010000188.1:1..3697;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000188.1 RefSeq gene 1 663 . + . ID=gene-HGK48_RS07995;Name=HGK48_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS07995;partial=true;start_range=.,1 NZ_JAATTN010000188.1 Protein Homology CDS 1 663 . + 0 ID=cds-WP_457550918.1;Parent=gene-HGK48_RS07995;Dbxref=GenBank:WP_457550918.1;Name=WP_457550918.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009494471.1;locus_tag=HGK48_RS07995;partial=true;product=RNA polymerase factor sigma-54;protein_id=WP_457550918.1;start_range=.,1;transl_table=11 NZ_JAATTN010000188.1 RefSeq gene 750 1790 . + . ID=gene-HGK48_RS08000;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=HGK48_RS08000 NZ_JAATTN010000188.1 Protein Homology CDS 750 1790 . + 0 ID=cds-WP_002849352.1;Parent=gene-HGK48_RS08000;Dbxref=GenBank:WP_002849352.1;Name=WP_002849352.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849352.1;locus_tag=HGK48_RS08000;product=3-dehydroquinate synthase;protein_id=WP_002849352.1;transl_table=11 NZ_JAATTN010000188.1 RefSeq gene 1787 3367 . + . ID=gene-HGK48_RS08005;Name=HGK48_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08005 NZ_JAATTN010000188.1 Protein Homology CDS 1787 3367 . + 0 ID=cds-WP_002849353.1;Parent=gene-HGK48_RS08005;Dbxref=GenBank:WP_002849353.1;Name=WP_002849353.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849353.1;locus_tag=HGK48_RS08005;product=mechanosensitive ion channel family protein;protein_id=WP_002849353.1;transl_table=11 NZ_JAATTN010000188.1 RefSeq pseudogene 3361 3697 . + . ID=gene-HGK48_RS08010;Name=HGK48_RS08010;end_range=3697,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08010;partial=true;pseudo=true NZ_JAATTN010000188.1 Protein Homology CDS 3361 3697 . + 0 ID=cds-HGK48_RS08010;Parent=gene-HGK48_RS08010;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3697,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009293782.1;locus_tag=HGK48_RS08010;partial=true;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000189.1 1 3683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000189.1 RefSeq region 1 3683 . + . ID=NZ_JAATTN010000189.1:1..3683;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000189.1 RefSeq gene 1 834 . + . ID=gene-HGK48_RS08015;Name=HGK48_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08015;partial=true;start_range=.,1 NZ_JAATTN010000189.1 Protein Homology CDS 1 834 . + 0 ID=cds-WP_168236825.1;Parent=gene-HGK48_RS08015;Dbxref=GenBank:WP_168236825.1;Name=WP_168236825.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=HGK48_RS08015;partial=true;product=GGDEF domain-containing protein;protein_id=WP_168236825.1;start_range=.,1;transl_table=11 NZ_JAATTN010000189.1 RefSeq gene 870 2618 . - . ID=gene-HGK48_RS08020;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=HGK48_RS08020 NZ_JAATTN010000189.1 Protein Homology CDS 870 2618 . - 0 ID=cds-WP_024305191.1;Parent=gene-HGK48_RS08020;Dbxref=GenBank:WP_024305191.1;Name=WP_024305191.1;Ontology_term=GO:0047134;gbkey=CDS;gene=dsbD;go_function=protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016647398.1;locus_tag=HGK48_RS08020;product=protein-disulfide reductase DsbD;protein_id=WP_024305191.1;transl_table=11 NZ_JAATTN010000189.1 RefSeq gene 2752 3582 . + . ID=gene-HGK48_RS08025;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=HGK48_RS08025 NZ_JAATTN010000189.1 Protein Homology CDS 2752 3582 . + 0 ID=cds-WP_011732076.1;Parent=gene-HGK48_RS08025;Dbxref=GenBank:WP_011732076.1;Name=WP_011732076.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002776266.1;locus_tag=HGK48_RS08025;product=polyphosphate kinase 2;protein_id=WP_011732076.1;transl_table=11 ##sequence-region NZ_JAATTN010000018.1 1 14314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000018.1 RefSeq region 1 14314 . + . ID=NZ_JAATTN010000018.1:1..14314;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000018.1 RefSeq gene 1 377 . - . ID=gene-HGK48_RS01855;Name=HGK48_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01855;partial=true;start_range=.,1 NZ_JAATTN010000018.1 Protein Homology CDS 1 377 . - 0 ID=cds-WP_240944801.1;Parent=gene-HGK48_RS01855;Dbxref=GenBank:WP_240944801.1;Name=WP_240944801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651007.1;locus_tag=HGK48_RS01855;partial=true;product=glyceraldehyde 3-phosphate dehydrogenase N-terminal domain-containing protein;protein_id=WP_240944801.1;start_range=.,1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 437 982 . + . ID=gene-HGK48_RS01860;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=HGK48_RS01860 NZ_JAATTN010000018.1 Protein Homology CDS 437 982 . + 0 ID=cds-WP_010399947.1;Parent=gene-HGK48_RS01860;Dbxref=GenBank:WP_010399947.1;Name=WP_010399947.1;Ontology_term=GO:0009435,GO:0000309,GO:0004515,GO:0005737;gbkey=CDS;gene=nadD;go_component=cytoplasm|0005737||IEA;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,nicotinate-nucleotide adenylyltransferase activity|0004515||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010399947.1;locus_tag=HGK48_RS01860;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=WP_010399947.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 972 1289 . + . ID=gene-HGK48_RS01865;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=HGK48_RS01865 NZ_JAATTN010000018.1 Protein Homology CDS 972 1289 . + 0 ID=cds-WP_002850309.1;Parent=gene-HGK48_RS01865;Dbxref=GenBank:WP_002850309.1;Name=WP_002850309.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732204.1;locus_tag=HGK48_RS01865;product=ribosome silencing factor;protein_id=WP_002850309.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 1312 2340 . - . ID=gene-HGK48_RS01870;Name=HGK48_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01870 NZ_JAATTN010000018.1 Protein Homology CDS 1312 2340 . - 0 ID=cds-WP_002850311.1;Parent=gene-HGK48_RS01870;Dbxref=GenBank:WP_002850311.1;Name=WP_002850311.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850311.1;locus_tag=HGK48_RS01870;product=YeiH family protein;protein_id=WP_002850311.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 2440 3321 . + . ID=gene-HGK48_RS01875;Name=HGK48_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01875 NZ_JAATTN010000018.1 Protein Homology CDS 2440 3321 . + 0 ID=cds-WP_002850312.1;Parent=gene-HGK48_RS01875;Dbxref=GenBank:WP_002850312.1;Name=WP_002850312.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=HGK48_RS01875;product=LysR family transcriptional regulator;protein_id=WP_002850312.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 3293 4888 . - . ID=gene-HGK48_RS01880;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=HGK48_RS01880 NZ_JAATTN010000018.1 Protein Homology CDS 3293 4888 . - 0 ID=cds-WP_002850314.1;Parent=gene-HGK48_RS01880;Dbxref=GenBank:WP_002850314.1;Name=WP_002850314.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850314.1;locus_tag=HGK48_RS01880;product=arginine--tRNA ligase;protein_id=WP_002850314.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 4888 5103 . - . ID=gene-HGK48_RS01885;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=HGK48_RS01885 NZ_JAATTN010000018.1 Protein Homology CDS 4888 5103 . - 0 ID=cds-WP_002850316.1;Parent=gene-HGK48_RS01885;Dbxref=GenBank:WP_002850316.1;Name=WP_002850316.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344567.1;locus_tag=HGK48_RS01885;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_002850316.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 5147 5758 . - . ID=gene-HGK48_RS01890;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=HGK48_RS01890 NZ_JAATTN010000018.1 Protein Homology CDS 5147 5758 . - 0 ID=cds-WP_011732205.1;Parent=gene-HGK48_RS01890;Dbxref=GenBank:WP_011732205.1;Name=WP_011732205.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012140266.1;locus_tag=HGK48_RS01890;product=guanylate kinase;protein_id=WP_011732205.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 5755 7428 . - . ID=gene-HGK48_RS01895;Name=HGK48_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01895 NZ_JAATTN010000018.1 GeneMarkS-2+ CDS 5755 7428 . - 0 ID=cds-WP_024305352.1;Parent=gene-HGK48_RS01895;Dbxref=GenBank:WP_024305352.1;Name=WP_024305352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01895;product=hypothetical protein;protein_id=WP_024305352.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 7492 8265 . - . ID=gene-HGK48_RS01900;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=HGK48_RS01900 NZ_JAATTN010000018.1 Protein Homology CDS 7492 8265 . - 0 ID=cds-WP_011732207.1;Parent=gene-HGK48_RS01900;Dbxref=GenBank:WP_011732207.1;Name=WP_011732207.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950075.1;locus_tag=HGK48_RS01900;product=flagellar biosynthetic protein FliR;protein_id=WP_011732207.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 8450 10516 . + . ID=gene-HGK48_RS01905;Name=HGK48_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01905 NZ_JAATTN010000018.1 Protein Homology CDS 8450 10516 . + 0 ID=cds-WP_002850395.1;Parent=gene-HGK48_RS01905;Dbxref=GenBank:WP_002850395.1;Name=WP_002850395.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: protein motif:HMM:TIGR01783.1;locus_tag=HGK48_RS01905;product=TonB-dependent receptor;protein_id=WP_002850395.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 10553 11197 . - . ID=gene-HGK48_RS01910;Name=HGK48_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01910 NZ_JAATTN010000018.1 Protein Homology CDS 10553 11197 . - 0 ID=cds-WP_002850398.1;Parent=gene-HGK48_RS01910;Dbxref=GenBank:WP_002850398.1;Name=WP_002850398.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850398.1;locus_tag=HGK48_RS01910;product=ABC transporter ATP-binding protein;protein_id=WP_002850398.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 11200 12264 . - . ID=gene-HGK48_RS01915;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=HGK48_RS01915 NZ_JAATTN010000018.1 Protein Homology CDS 11200 12264 . - 0 ID=cds-WP_011732208.1;Parent=gene-HGK48_RS01915;Dbxref=GenBank:WP_011732208.1;Name=WP_011732208.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732208.1;locus_tag=HGK48_RS01915;product=translation elongation factor Ts;protein_id=WP_011732208.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 12264 13040 . - . ID=gene-HGK48_RS01920;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=HGK48_RS01920 NZ_JAATTN010000018.1 Protein Homology CDS 12264 13040 . - 0 ID=cds-WP_002850403.1;Parent=gene-HGK48_RS01920;Dbxref=GenBank:WP_002850403.1;Name=WP_002850403.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850403.1;locus_tag=HGK48_RS01920;product=30S ribosomal protein S2;protein_id=WP_002850403.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 13193 13414 . - . ID=gene-HGK48_RS01925;Name=HGK48_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01925 NZ_JAATTN010000018.1 GeneMarkS-2+ CDS 13193 13414 . - 0 ID=cds-WP_002850405.1;Parent=gene-HGK48_RS01925;Dbxref=GenBank:WP_002850405.1;Name=WP_002850405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01925;product=hypothetical protein;protein_id=WP_002850405.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq gene 13411 14100 . - . ID=gene-HGK48_RS01930;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=HGK48_RS01930 NZ_JAATTN010000018.1 Protein Homology CDS 13411 14100 . - 0 ID=cds-WP_002850407.1;Parent=gene-HGK48_RS01930;Dbxref=GenBank:WP_002850407.1;Name=WP_002850407.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850407.1;locus_tag=HGK48_RS01930;product=peptidoglycan editing factor PgeF;protein_id=WP_002850407.1;transl_table=11 NZ_JAATTN010000018.1 RefSeq pseudogene 14084 14314 . - . ID=gene-HGK48_RS01935;Name=HGK48_RS01935;end_range=14314,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS01935;partial=true;pseudo=true NZ_JAATTN010000018.1 Protein Homology CDS 14084 14314 . - 0 ID=cds-HGK48_RS01935;Parent=gene-HGK48_RS01935;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=14314,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850409.1;locus_tag=HGK48_RS01935;partial=true;product=riboflavin synthase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000190.1 1 3610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000190.1 RefSeq region 1 3610 . + . ID=NZ_JAATTN010000190.1:1..3610;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000190.1 RefSeq gene 1 742 . - . ID=gene-HGK48_RS08030;Name=HGK48_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08030;partial=true;start_range=.,1 NZ_JAATTN010000190.1 Protein Homology CDS 1 742 . - 0 ID=cds-WP_206120314.1;Parent=gene-HGK48_RS08030;Dbxref=GenBank:WP_206120314.1;Name=WP_206120314.1;Ontology_term=GO:0015628,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849567.1;locus_tag=HGK48_RS08030;partial=true;product=type II secretion system F family protein;protein_id=WP_206120314.1;start_range=.,1;transl_table=11 NZ_JAATTN010000190.1 RefSeq gene 739 2535 . - . ID=gene-HGK48_RS08035;Name=HGK48_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08035 NZ_JAATTN010000190.1 Protein Homology CDS 739 2535 . - 0 ID=cds-WP_002849566.1;Parent=gene-HGK48_RS08035;Dbxref=GenBank:WP_002849566.1;Name=WP_002849566.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849566.1;locus_tag=HGK48_RS08035;product=GspE/PulE family protein;protein_id=WP_002849566.1;transl_table=11 NZ_JAATTN010000190.1 RefSeq gene 2548 3477 . - . ID=gene-HGK48_RS08040;Name=HGK48_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08040 NZ_JAATTN010000190.1 Protein Homology CDS 2548 3477 . - 0 ID=cds-WP_002849564.1;Parent=gene-HGK48_RS08040;Dbxref=GenBank:WP_002849564.1;Name=WP_002849564.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024299.6;locus_tag=HGK48_RS08040;product=CDC27 family protein;protein_id=WP_002849564.1;transl_table=11 ##sequence-region NZ_JAATTN010000191.1 1 3522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000191.1 RefSeq region 1 3522 . + . ID=NZ_JAATTN010000191.1:1..3522;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000191.1 RefSeq gene 97 993 . - . ID=gene-HGK48_RS08055;Name=HGK48_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08055 NZ_JAATTN010000191.1 Protein Homology CDS 97 993 . - 0 ID=cds-WP_002848670.1;Parent=gene-HGK48_RS08055;Dbxref=GenBank:WP_002848670.1;Name=WP_002848670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848670.1;locus_tag=HGK48_RS08055;product=NapH/MauN family ferredoxin-type protein;protein_id=WP_002848670.1;transl_table=11 NZ_JAATTN010000191.1 RefSeq gene 998 1447 . - . ID=gene-HGK48_RS08060;Name=HGK48_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08060 NZ_JAATTN010000191.1 Protein Homology CDS 998 1447 . - 0 ID=cds-WP_011731822.1;Parent=gene-HGK48_RS08060;Dbxref=GenBank:WP_011731822.1;Name=WP_011731822.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731822.1;locus_tag=HGK48_RS08060;product=c-type cytochrome;protein_id=WP_011731822.1;transl_table=11 NZ_JAATTN010000191.1 RefSeq gene 1444 1992 . - . ID=gene-HGK48_RS08065;Name=HGK48_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08065 NZ_JAATTN010000191.1 Protein Homology CDS 1444 1992 . - 0 ID=cds-WP_002848668.1;Parent=gene-HGK48_RS08065;Dbxref=GenBank:WP_002848668.1;Name=WP_002848668.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848668.1;locus_tag=HGK48_RS08065;product=c-type cytochrome;protein_id=WP_002848668.1;transl_table=11 NZ_JAATTN010000191.1 RefSeq gene 1995 2333 . - . ID=gene-HGK48_RS11275;Name=HGK48_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11275 NZ_JAATTN010000191.1 Protein Homology CDS 1995 2333 . - 0 ID=cds-WP_240944831.1;Parent=gene-HGK48_RS11275;Dbxref=GenBank:WP_240944831.1;Name=WP_240944831.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024634.6;locus_tag=HGK48_RS11275;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_240944831.1;transl_table=11 NZ_JAATTN010000191.1 RefSeq gene 2394 2669 . - . ID=gene-HGK48_RS11280;Name=HGK48_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11280 NZ_JAATTN010000191.1 Protein Homology CDS 2394 2669 . - 0 ID=cds-WP_240944832.1;Parent=gene-HGK48_RS11280;Dbxref=GenBank:WP_240944832.1;Name=WP_240944832.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012267.6;locus_tag=HGK48_RS11280;product=4Fe-4S binding protein;protein_id=WP_240944832.1;transl_table=11 NZ_JAATTN010000191.1 RefSeq gene 2662 3522 . - . ID=gene-HGK48_RS08075;Name=HGK48_RS08075;end_range=3522,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08075;partial=true NZ_JAATTN010000191.1 Protein Homology CDS 2662 3522 . - 0 ID=cds-WP_168236826.1;Parent=gene-HGK48_RS08075;Dbxref=GenBank:WP_168236826.1;Name=WP_168236826.1;end_range=3522,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848666.1;locus_tag=HGK48_RS08075;partial=true;product=NosD domain-containing protein;protein_id=WP_168236826.1;transl_table=11 ##sequence-region NZ_JAATTN010000192.1 1 3539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000192.1 RefSeq region 1 3539 . + . ID=NZ_JAATTN010000192.1:1..3539;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000192.1 RefSeq pseudogene 1 524 . + . ID=gene-HGK48_RS08080;Name=HGK48_RS08080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08080;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000192.1 GeneMarkS-2+ CDS 1 524 . + 2 ID=cds-HGK48_RS08080;Parent=gene-HGK48_RS08080;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08080;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000192.1 RefSeq gene 521 2008 . + . ID=gene-HGK48_RS08085;Name=HGK48_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08085 NZ_JAATTN010000192.1 Protein Homology CDS 521 2008 . + 0 ID=cds-WP_024305336.1;Parent=gene-HGK48_RS08085;Dbxref=GenBank:WP_024305336.1;Name=WP_024305336.1;Ontology_term=GO:0015990,GO:0042773,GO:0008137,GO:0048039,GO:0045271;gbkey=CDS;go_component=respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,ubiquinone binding|0048039||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: protein motif:HMM:TIGR01972.1;locus_tag=HGK48_RS08085;product=complex I subunit 4 family protein;protein_id=WP_024305336.1;transl_table=11 NZ_JAATTN010000192.1 RefSeq gene 2005 3414 . + . ID=gene-HGK48_RS08090;Name=HGK48_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08090 NZ_JAATTN010000192.1 Protein Homology CDS 2005 3414 . + 0 ID=cds-WP_002848167.1;Parent=gene-HGK48_RS08090;Dbxref=GenBank:WP_002848167.1;Name=WP_002848167.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0050136,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: protein motif:HMM:NF012581.7;locus_tag=HGK48_RS08090;product=NADH-quinone oxidoreductase subunit N;protein_id=WP_002848167.1;transl_table=11 ##sequence-region NZ_JAATTN010000193.1 1 3510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000193.1 RefSeq region 1 3510 . + . ID=NZ_JAATTN010000193.1:1..3510;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000193.1 RefSeq gene 1 961 . - . ID=gene-HGK48_RS08095;Name=HGK48_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08095;partial=true;start_range=.,1 NZ_JAATTN010000193.1 Protein Homology CDS 1 961 . - 0 ID=cds-WP_168236827.1;Parent=gene-HGK48_RS08095;Dbxref=GenBank:WP_168236827.1;Name=WP_168236827.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013126.6;locus_tag=HGK48_RS08095;partial=true;product=glycoside hydrolase family 3 protein;protein_id=WP_168236827.1;start_range=.,1;transl_table=11 NZ_JAATTN010000193.1 RefSeq gene 958 1848 . - . ID=gene-HGK48_RS08100;Name=HGK48_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08100 NZ_JAATTN010000193.1 Protein Homology CDS 958 1848 . - 0 ID=cds-WP_002849216.1;Parent=gene-HGK48_RS08100;Dbxref=GenBank:WP_002849216.1;Name=WP_002849216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849216.1;locus_tag=HGK48_RS08100;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_002849216.1;transl_table=11 NZ_JAATTN010000193.1 RefSeq gene 1860 3278 . - . ID=gene-HGK48_RS08105;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=HGK48_RS08105 NZ_JAATTN010000193.1 Protein Homology CDS 1860 3278 . - 0 ID=cds-WP_011731949.1;Parent=gene-HGK48_RS08105;Dbxref=GenBank:WP_011731949.1;Name=WP_011731949.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731949.1;locus_tag=HGK48_RS08105;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_011731949.1;transl_table=11 ##sequence-region NZ_JAATTN010000194.1 1 3419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000194.1 RefSeq region 1 3419 . + . ID=NZ_JAATTN010000194.1:1..3419;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000194.1 RefSeq gene 1 779 . - . ID=gene-HGK48_RS08115;Name=HGK48_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08115;partial=true;start_range=.,1 NZ_JAATTN010000194.1 Protein Homology CDS 1 779 . - 0 ID=cds-WP_168236828.1;Parent=gene-HGK48_RS08115;Dbxref=GenBank:WP_168236828.1;Name=WP_168236828.1;Ontology_term=GO:0015031,GO:0015891,GO:0055085,GO:0031992,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=energy transducer activity|0031992||IEA;go_process=protein transport|0015031||IEA,siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024503.6;locus_tag=HGK48_RS08115;partial=true;product=energy transducer TonB;protein_id=WP_168236828.1;start_range=.,1;transl_table=11 NZ_JAATTN010000194.1 RefSeq gene 745 1074 . - . ID=gene-HGK48_RS08120;Name=HGK48_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08120 NZ_JAATTN010000194.1 Protein Homology CDS 745 1074 . - 0 ID=cds-WP_002848381.1;Parent=gene-HGK48_RS08120;Dbxref=GenBank:WP_002848381.1;Name=WP_002848381.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848381.1;locus_tag=HGK48_RS08120;product=biopolymer transporter ExbD;protein_id=WP_002848381.1;transl_table=11 NZ_JAATTN010000194.1 RefSeq gene 1122 1550 . - . ID=gene-HGK48_RS08125;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=HGK48_RS08125 NZ_JAATTN010000194.1 Protein Homology CDS 1122 1550 . - 0 ID=cds-WP_002848380.1;Parent=gene-HGK48_RS08125;Dbxref=GenBank:WP_002848380.1;Name=WP_002848380.1;Ontology_term=GO:0055085,GO:0015078,GO:0016020;gbkey=CDS;gene=exbB;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848380.1;locus_tag=HGK48_RS08125;product=TonB-system energizer ExbB;protein_id=WP_002848380.1;transl_table=11 NZ_JAATTN010000194.1 RefSeq gene 1561 2352 . - . ID=gene-HGK48_RS08130;Name=HGK48_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08130 NZ_JAATTN010000194.1 Protein Homology CDS 1561 2352 . - 0 ID=cds-WP_011731763.1;Parent=gene-HGK48_RS08130;Dbxref=GenBank:WP_011731763.1;Name=WP_011731763.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF013382.6;locus_tag=HGK48_RS08130;product=class I SAM-dependent methyltransferase;protein_id=WP_011731763.1;transl_table=11 NZ_JAATTN010000194.1 RefSeq gene 2349 3077 . - . ID=gene-HGK48_RS08135;Name=HGK48_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08135 NZ_JAATTN010000194.1 Protein Homology CDS 2349 3077 . - 0 ID=cds-WP_002848377.1;Parent=gene-HGK48_RS08135;Dbxref=GenBank:WP_002848377.1;Name=WP_002848377.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF014516.6;locus_tag=HGK48_RS08135;product=ABC transporter ATP-binding protein;protein_id=WP_002848377.1;transl_table=11 NZ_JAATTN010000194.1 RefSeq pseudogene 3074 3385 . - . ID=gene-HGK48_RS08140;Name=HGK48_RS08140;end_range=3385,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08140;partial=true;pseudo=true NZ_JAATTN010000194.1 Protein Homology CDS 3074 3385 . - 0 ID=cds-HGK48_RS08140;Parent=gene-HGK48_RS08140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0022857,GO:0016020;end_range=3385,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: protein motif:HMM:NF013219.6;locus_tag=HGK48_RS08140;partial=true;product=iron chelate uptake ABC transporter family permease subunit;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000195.1 1 3490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000195.1 RefSeq region 1 3490 . + . ID=NZ_JAATTN010000195.1:1..3490;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000195.1 RefSeq gene 1 513 . + . ID=gene-HGK48_RS08145;Name=HGK48_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08145;partial=true;start_range=.,1 NZ_JAATTN010000195.1 Protein Homology CDS 1 513 . + 0 ID=cds-WP_168236829.1;Parent=gene-HGK48_RS08145;Dbxref=GenBank:WP_168236829.1;Name=WP_168236829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886238.1;locus_tag=HGK48_RS08145;partial=true;product=DUF1882 domain-containing protein;protein_id=WP_168236829.1;start_range=.,1;transl_table=11 NZ_JAATTN010000195.1 RefSeq gene 524 1291 . + . ID=gene-HGK48_RS08150;Name=HGK48_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08150 NZ_JAATTN010000195.1 Protein Homology CDS 524 1291 . + 0 ID=cds-WP_002849764.1;Parent=gene-HGK48_RS08150;Dbxref=GenBank:WP_002849764.1;Name=WP_002849764.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: protein motif:HMM:NF016895.6;locus_tag=HGK48_RS08150;product=SPOR domain-containing protein;protein_id=WP_002849764.1;transl_table=11 NZ_JAATTN010000195.1 RefSeq gene 1291 2076 . + . ID=gene-HGK48_RS08155;Name=HGK48_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08155 NZ_JAATTN010000195.1 Protein Homology CDS 1291 2076 . + 0 ID=cds-WP_002849763.1;Parent=gene-HGK48_RS08155;Dbxref=GenBank:WP_002849763.1;Name=WP_002849763.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849763.1;locus_tag=HGK48_RS08155;product=shikimate dehydrogenase;protein_id=WP_002849763.1;transl_table=11 NZ_JAATTN010000195.1 RefSeq gene 2092 2661 . - . ID=gene-HGK48_RS08160;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=HGK48_RS08160 NZ_JAATTN010000195.1 Protein Homology CDS 2092 2661 . - 0 ID=cds-WP_002849761.1;Parent=gene-HGK48_RS08160;Dbxref=GenBank:WP_002849761.1;Name=WP_002849761.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849761.1;locus_tag=HGK48_RS08160;product=recombination mediator RecR;protein_id=WP_002849761.1;transl_table=11 NZ_JAATTN010000195.1 RefSeq gene 2642 3490 . - . ID=gene-HGK48_RS08165;Name=HGK48_RS08165;end_range=3490,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08165;partial=true NZ_JAATTN010000195.1 Protein Homology CDS 2642 3490 . - 0 ID=cds-WP_168236830.1;Parent=gene-HGK48_RS08165;Dbxref=GenBank:WP_168236830.1;Name=WP_168236830.1;Ontology_term=GO:0007165,GO:0000155;end_range=3490,.;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849760.1;locus_tag=HGK48_RS08165;partial=true;product=ArsS family sensor histidine kinase;protein_id=WP_168236830.1;transl_table=11 ##sequence-region NZ_JAATTN010000196.1 1 3467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000196.1 RefSeq region 1 3467 . + . ID=NZ_JAATTN010000196.1:1..3467;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000196.1 RefSeq pseudogene 1 437 . - . ID=gene-HGK48_RS08170;Name=HGK48_RS08170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08170;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000196.1 GeneMarkS-2+ CDS 1 437 . - 0 ID=cds-HGK48_RS08170;Parent=gene-HGK48_RS08170;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08170;partial=true;product=PEP/pyruvate-binding domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000196.1 RefSeq pseudogene 434 1209 . - . ID=gene-HGK48_RS08175;Name=HGK48_RS08175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08175;pseudo=true NZ_JAATTN010000196.1 Protein Homology CDS 434 1209 . - 0 ID=cds-HGK48_RS08175;Parent=gene-HGK48_RS08175;Note=frameshifted;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002880381.1;locus_tag=HGK48_RS08175;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_JAATTN010000196.1 RefSeq pseudogene 1335 2095 . - . ID=gene-HGK48_RS08180;Name=HGK48_RS08180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08180;pseudo=true NZ_JAATTN010000196.1 Protein Homology CDS 1335 2095 . - 0 ID=cds-HGK48_RS08180;Parent=gene-HGK48_RS08180;Note=frameshifted;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850696.1;locus_tag=HGK48_RS08180;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_JAATTN010000196.1 RefSeq pseudogene 2118 2636 . - . ID=gene-HGK48_RS08185;Name=HGK48_RS08185;end_range=2636,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08185;partial=true;pseudo=true NZ_JAATTN010000196.1 Protein Homology CDS 2118 2636 . - 0 ID=cds-HGK48_RS08185;Parent=gene-HGK48_RS08185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2636,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850694.1;locus_tag=HGK48_RS08185;partial=true;product=adenylyl-sulfate kinase;pseudo=true;transl_table=11 NZ_JAATTN010000196.1 RefSeq gene 2657 3334 . - . ID=gene-HGK48_RS08190;Name=HGK48_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08190 NZ_JAATTN010000196.1 GeneMarkS-2+ CDS 2657 3334 . - 0 ID=cds-WP_240944834.1;Parent=gene-HGK48_RS08190;Dbxref=GenBank:WP_240944834.1;Name=WP_240944834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08190;product=hypothetical protein;protein_id=WP_240944834.1;transl_table=11 ##sequence-region NZ_JAATTN010000197.1 1 3375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000197.1 RefSeq region 1 3375 . + . ID=NZ_JAATTN010000197.1:1..3375;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000197.1 RefSeq gene 116 730 . + . ID=gene-HGK48_RS08195;Name=HGK48_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08195 NZ_JAATTN010000197.1 Protein Homology CDS 116 730 . + 0 ID=cds-WP_002848364.1;Parent=gene-HGK48_RS08195;Dbxref=GenBank:WP_002848364.1;Name=WP_002848364.1;Ontology_term=GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848364.1;locus_tag=HGK48_RS08195;product=non-canonical purine NTP pyrophosphatase;protein_id=WP_002848364.1;transl_table=11 NZ_JAATTN010000197.1 RefSeq gene 1015 3069 . + . ID=gene-HGK48_RS08200;Name=HGK48_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08200 NZ_JAATTN010000197.1 Protein Homology CDS 1015 3069 . + 0 ID=cds-WP_024305304.1;Parent=gene-HGK48_RS08200;Dbxref=GenBank:WP_024305304.1;Name=WP_024305304.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012801.6;locus_tag=HGK48_RS08200;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_024305304.1;transl_table=11 NZ_JAATTN010000197.1 RefSeq gene 3069 3375 . + . ID=gene-HGK48_RS08205;Name=HGK48_RS08205;end_range=3375,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08205;partial=true NZ_JAATTN010000197.1 Protein Homology CDS 3069 3375 . + 0 ID=cds-WP_168236831.1;Parent=gene-HGK48_RS08205;Dbxref=GenBank:WP_168236831.1;Name=WP_168236831.1;Ontology_term=GO:0010181,GO:0016491,GO:0070967;end_range=3375,.;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: protein motif:HMM:NF012517.6;locus_tag=HGK48_RS08205;partial=true;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_168236831.1;transl_table=11 ##sequence-region NZ_JAATTN010000198.1 1 3452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000198.1 RefSeq region 1 3452 . + . ID=NZ_JAATTN010000198.1:1..3452;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000198.1 RefSeq gene 46 1074 . - . ID=gene-HGK48_RS08210;Name=HGK48_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08210 NZ_JAATTN010000198.1 Protein Homology CDS 46 1074 . - 0 ID=cds-WP_081305157.1;Parent=gene-HGK48_RS08210;Dbxref=GenBank:WP_081305157.1;Name=WP_081305157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662259.1;locus_tag=HGK48_RS08210;product=type IV secretion system protein;protein_id=WP_081305157.1;transl_table=11 NZ_JAATTN010000198.1 RefSeq gene 1075 1254 . - . ID=gene-HGK48_RS08215;Name=HGK48_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08215 NZ_JAATTN010000198.1 GeneMarkS-2+ CDS 1075 1254 . - 0 ID=cds-WP_065839583.1;Parent=gene-HGK48_RS08215;Dbxref=GenBank:WP_065839583.1;Name=WP_065839583.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08215;product=hypothetical protein;protein_id=WP_065839583.1;transl_table=11 NZ_JAATTN010000198.1 RefSeq gene 1291 3255 . - . ID=gene-HGK48_RS08220;Name=HGK48_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08220 NZ_JAATTN010000198.1 Protein Homology CDS 1291 3255 . - 0 ID=cds-WP_240944835.1;Parent=gene-HGK48_RS08220;Dbxref=GenBank:WP_240944835.1;Name=WP_240944835.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662258.1;locus_tag=HGK48_RS08220;product=VirB4 family type IV secretion/conjugal transfer ATPase;protein_id=WP_240944835.1;transl_table=11 ##sequence-region NZ_JAATTN010000199.1 1 3356 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000199.1 RefSeq region 1 3356 . + . ID=NZ_JAATTN010000199.1:1..3356;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000199.1 RefSeq gene 20 1540 . - . ID=gene-HGK48_RS08225;Name=HGK48_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08225 NZ_JAATTN010000199.1 Protein Homology CDS 20 1540 . - 0 ID=cds-WP_002850159.1;Parent=gene-HGK48_RS08225;Dbxref=GenBank:WP_002850159.1;Name=WP_002850159.1;Ontology_term=GO:0009098,GO:0019752,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA,carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850159.1;locus_tag=HGK48_RS08225;product=2-isopropylmalate synthase;protein_id=WP_002850159.1;transl_table=11 NZ_JAATTN010000199.1 RefSeq gene 1703 2437 . - . ID=gene-HGK48_RS08230;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=HGK48_RS08230 NZ_JAATTN010000199.1 Protein Homology CDS 1703 2437 . - 0 ID=cds-WP_024305411.1;Parent=gene-HGK48_RS08230;Dbxref=GenBank:WP_024305411.1;Name=WP_024305411.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850161.1;locus_tag=HGK48_RS08230;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_024305411.1;transl_table=11 NZ_JAATTN010000199.1 RefSeq gene 2442 3059 . - . ID=gene-HGK48_RS08235;Name=HGK48_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08235 NZ_JAATTN010000199.1 Protein Homology CDS 2442 3059 . - 0 ID=cds-WP_002850163.1;Parent=gene-HGK48_RS08235;Dbxref=GenBank:WP_002850163.1;Name=WP_002850163.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: protein motif:HMM:NF014696.6;locus_tag=HGK48_RS08235;product=phosphatidylserine decarboxylase;protein_id=WP_002850163.1;transl_table=11 NZ_JAATTN010000199.1 RefSeq pseudogene 3062 3356 . - . ID=gene-HGK48_RS08240;Name=HGK48_RS08240;end_range=3356,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08240;partial=true;pseudo=true NZ_JAATTN010000199.1 Protein Homology CDS 3062 3356 . - 1 ID=cds-HGK48_RS08240;Parent=gene-HGK48_RS08240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3356,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850165.1;locus_tag=HGK48_RS08240;partial=true;product=ATP-dependent zinc metalloprotease FtsH;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000019.1 1 13947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000019.1 RefSeq region 1 13947 . + . ID=NZ_JAATTN010000019.1:1..13947;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000019.1 RefSeq gene 1 2341 . + . ID=gene-HGK48_RS01940;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=HGK48_RS01940;partial=true;start_range=.,1 NZ_JAATTN010000019.1 Protein Homology CDS 1 2341 . + 1 ID=cds-WP_168236656.1;Parent=gene-HGK48_RS01940;Dbxref=GenBank:WP_168236656.1;Name=WP_168236656.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991961.1;locus_tag=HGK48_RS01940;partial=true;product=isoleucine--tRNA ligase;protein_id=WP_168236656.1;start_range=.,1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 2441 3802 . + . ID=gene-HGK48_RS01945;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=HGK48_RS01945 NZ_JAATTN010000019.1 Protein Homology CDS 2441 3802 . + 0 ID=cds-WP_002849009.1;Parent=gene-HGK48_RS01945;Dbxref=GenBank:WP_002849009.1;Name=WP_002849009.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849009.1;locus_tag=HGK48_RS01945;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_002849009.1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 3807 5258 . + . ID=gene-HGK48_RS01950;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=HGK48_RS01950 NZ_JAATTN010000019.1 Protein Homology CDS 3807 5258 . + 0 ID=cds-WP_002849011.1;Parent=gene-HGK48_RS01950;Dbxref=GenBank:WP_002849011.1;Name=WP_002849011.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002951037.1;locus_tag=HGK48_RS01950;product=IMP dehydrogenase;protein_id=WP_002849011.1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 5258 6364 . + . ID=gene-HGK48_RS01955;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=HGK48_RS01955 NZ_JAATTN010000019.1 Protein Homology CDS 5258 6364 . + 0 ID=cds-WP_002849013.1;Parent=gene-HGK48_RS01955;Dbxref=GenBank:WP_002849013.1;Name=WP_002849013.1;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;gene=metX;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849013.1;locus_tag=HGK48_RS01955;product=homoserine O-acetyltransferase MetX;protein_id=WP_002849013.1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 6355 6552 . + . ID=gene-HGK48_RS01960;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=HGK48_RS01960 NZ_JAATTN010000019.1 Protein Homology CDS 6355 6552 . + 0 ID=cds-WP_002849015.1;Parent=gene-HGK48_RS01960;Dbxref=GenBank:WP_002849015.1;Name=WP_002849015.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseB;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849015.1;locus_tag=HGK48_RS01960;product=exodeoxyribonuclease VII small subunit;protein_id=WP_002849015.1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 6545 7351 . + . ID=gene-HGK48_RS01965;Name=HGK48_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01965 NZ_JAATTN010000019.1 Protein Homology CDS 6545 7351 . + 0 ID=cds-WP_002849016.1;Parent=gene-HGK48_RS01965;Dbxref=GenBank:WP_002849016.1;Name=WP_002849016.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849016.1;locus_tag=HGK48_RS01965;product=carbon-nitrogen hydrolase family protein;protein_id=WP_002849016.1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 7353 8651 . + . ID=gene-HGK48_RS01970;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=HGK48_RS01970 NZ_JAATTN010000019.1 Protein Homology CDS 7353 8651 . + 0 ID=cds-WP_002849017.1;Parent=gene-HGK48_RS01970;Dbxref=GenBank:WP_002849017.1;Name=WP_002849017.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849017.1;locus_tag=HGK48_RS01970;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_002849017.1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 8648 8989 . + . ID=gene-HGK48_RS01975;Name=HGK48_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01975 NZ_JAATTN010000019.1 GeneMarkS-2+ CDS 8648 8989 . + 0 ID=cds-WP_010403977.1;Parent=gene-HGK48_RS01975;Dbxref=GenBank:WP_010403977.1;Name=WP_010403977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01975;product=hypothetical protein;protein_id=WP_010403977.1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 8993 10009 . + . ID=gene-HGK48_RS01980;Name=HGK48_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01980 NZ_JAATTN010000019.1 Protein Homology CDS 8993 10009 . + 0 ID=cds-WP_002849020.1;Parent=gene-HGK48_RS01980;Dbxref=GenBank:WP_002849020.1;Name=WP_002849020.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849020.1;locus_tag=HGK48_RS01980;product=oxidoreductase;protein_id=WP_002849020.1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 10006 10749 . - . ID=gene-HGK48_RS01985;Name=HGK48_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01985 NZ_JAATTN010000019.1 Protein Homology CDS 10006 10749 . - 0 ID=cds-WP_002849022.1;Parent=gene-HGK48_RS01985;Dbxref=GenBank:WP_002849022.1;Name=WP_002849022.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991645.1;locus_tag=HGK48_RS01985;product=ABC transporter ATP-binding protein;protein_id=WP_002849022.1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 10733 11470 . - . ID=gene-HGK48_RS01990;Name=HGK48_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01990 NZ_JAATTN010000019.1 Protein Homology CDS 10733 11470 . - 0 ID=cds-WP_002849024.1;Parent=gene-HGK48_RS01990;Dbxref=GenBank:WP_002849024.1;Name=WP_002849024.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849024.1;locus_tag=HGK48_RS01990;product=ABC transporter permease;protein_id=WP_002849024.1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 11472 12389 . - . ID=gene-HGK48_RS01995;Name=HGK48_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01995 NZ_JAATTN010000019.1 Protein Homology CDS 11472 12389 . - 0 ID=cds-WP_002849026.1;Parent=gene-HGK48_RS01995;Dbxref=GenBank:WP_002849026.1;Name=WP_002849026.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849026.1;locus_tag=HGK48_RS01995;product=ABC transporter substrate-binding protein;protein_id=WP_002849026.1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 12386 13450 . - . ID=gene-HGK48_RS02000;Name=HGK48_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02000 NZ_JAATTN010000019.1 Protein Homology CDS 12386 13450 . - 0 ID=cds-WP_011731882.1;Parent=gene-HGK48_RS02000;Dbxref=GenBank:WP_011731882.1;Name=WP_011731882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731882.1;locus_tag=HGK48_RS02000;product=acyl-CoA dehydrogenase family protein;protein_id=WP_011731882.1;transl_table=11 NZ_JAATTN010000019.1 RefSeq gene 13468 13947 . - . ID=gene-HGK48_RS02005;Name=HGK48_RS02005;end_range=13947,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02005;partial=true NZ_JAATTN010000019.1 Protein Homology CDS 13468 13947 . - 0 ID=cds-WP_168236657.1;Parent=gene-HGK48_RS02005;Dbxref=GenBank:WP_168236657.1;Name=WP_168236657.1;Ontology_term=GO:0006979,GO:0004601;end_range=13947,.;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002813309.1;locus_tag=HGK48_RS02005;partial=true;product=OsmC family protein;protein_id=WP_168236657.1;transl_table=11 ##sequence-region NZ_JAATTN010000001.1 1 32577 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000001.1 RefSeq region 1 32577 . + . ID=NZ_JAATTN010000001.1:1..32577;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000001.1 RefSeq gene 1 1012 . + . ID=gene-HGK48_RS00005;Name=HGK48_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00005;partial=true;start_range=.,1 NZ_JAATTN010000001.1 Protein Homology CDS 1 1012 . + 1 ID=cds-WP_206120287.1;Parent=gene-HGK48_RS00005;Dbxref=GenBank:WP_206120287.1;Name=WP_206120287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010404288.1;locus_tag=HGK48_RS00005;partial=true;product=terminase large subunit domain-containing protein;protein_id=WP_206120287.1;start_range=.,1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 1012 1425 . + . ID=gene-HGK48_RS00010;Name=HGK48_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00010 NZ_JAATTN010000001.1 Protein Homology CDS 1012 1425 . + 0 ID=cds-WP_025370353.1;Parent=gene-HGK48_RS00010;Dbxref=GenBank:WP_025370353.1;Name=WP_025370353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010404290.1;locus_tag=HGK48_RS00010;product=HK97 gp10 family phage protein;protein_id=WP_025370353.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 1734 2030 . - . ID=gene-HGK48_RS00015;Name=HGK48_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00015 NZ_JAATTN010000001.1 GeneMarkS-2+ CDS 1734 2030 . - 0 ID=cds-WP_010403314.1;Parent=gene-HGK48_RS00015;Dbxref=GenBank:WP_010403314.1;Name=WP_010403314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00015;product=hypothetical protein;protein_id=WP_010403314.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 2006 3232 . - . ID=gene-HGK48_RS00020;Name=HGK48_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00020 NZ_JAATTN010000001.1 GeneMarkS-2+ CDS 2006 3232 . - 0 ID=cds-WP_010403312.1;Parent=gene-HGK48_RS00020;Dbxref=GenBank:WP_010403312.1;Name=WP_010403312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00020;product=structural protein;protein_id=WP_010403312.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 3225 3410 . - . ID=gene-HGK48_RS00025;Name=HGK48_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00025 NZ_JAATTN010000001.1 Protein Homology CDS 3225 3410 . - 0 ID=cds-WP_010403310.1;Parent=gene-HGK48_RS00025;Dbxref=GenBank:WP_010403310.1;Name=WP_010403310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850358.1;locus_tag=HGK48_RS00025;product=NrdR family transcriptional regulator;protein_id=WP_010403310.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 3407 3844 . - . ID=gene-HGK48_RS00030;Name=HGK48_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00030 NZ_JAATTN010000001.1 Protein Homology CDS 3407 3844 . - 0 ID=cds-WP_065840709.1;Parent=gene-HGK48_RS00030;Dbxref=GenBank:WP_065840709.1;Name=WP_065840709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850356.1;locus_tag=HGK48_RS00030;product=hypothetical protein;protein_id=WP_065840709.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 3846 4295 . - . ID=gene-HGK48_RS00035;Name=HGK48_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00035 NZ_JAATTN010000001.1 GeneMarkS-2+ CDS 3846 4295 . - 0 ID=cds-WP_024305443.1;Parent=gene-HGK48_RS00035;Dbxref=GenBank:WP_024305443.1;Name=WP_024305443.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00035;product=hypothetical protein;protein_id=WP_024305443.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 4423 4614 . - . ID=gene-HGK48_RS00040;Name=HGK48_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00040 NZ_JAATTN010000001.1 GeneMarkS-2+ CDS 4423 4614 . - 0 ID=cds-WP_024305444.1;Parent=gene-HGK48_RS00040;Dbxref=GenBank:WP_024305444.1;Name=WP_024305444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00040;product=hypothetical protein;protein_id=WP_024305444.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 4611 4772 . - . ID=gene-HGK48_RS00045;Name=HGK48_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00045 NZ_JAATTN010000001.1 GeneMarkS-2+ CDS 4611 4772 . - 0 ID=cds-WP_010400020.1;Parent=gene-HGK48_RS00045;Dbxref=GenBank:WP_010400020.1;Name=WP_010400020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00045;product=RNA polymerase sigma factor sigma-70 region 4 domain-containing protein;protein_id=WP_010400020.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 4841 5233 . - . ID=gene-HGK48_RS00050;Name=HGK48_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00050 NZ_JAATTN010000001.1 Protein Homology CDS 4841 5233 . - 0 ID=cds-WP_029662472.1;Parent=gene-HGK48_RS00050;Dbxref=GenBank:WP_029662472.1;Name=WP_029662472.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02681.1;locus_tag=HGK48_RS00050;product=Rha family transcriptional regulator;protein_id=WP_029662472.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 5618 5845 . - . ID=gene-HGK48_RS00055;Name=HGK48_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00055 NZ_JAATTN010000001.1 Protein Homology CDS 5618 5845 . - 0 ID=cds-WP_024305452.1;Parent=gene-HGK48_RS00055;Dbxref=GenBank:WP_024305452.1;Name=WP_024305452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002826690.1;locus_tag=HGK48_RS00055;product=hypothetical protein;protein_id=WP_024305452.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 6102 6284 . - . ID=gene-HGK48_RS00060;Name=HGK48_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00060 NZ_JAATTN010000001.1 GeneMarkS-2+ CDS 6102 6284 . - 0 ID=cds-WP_010393320.1;Parent=gene-HGK48_RS00060;Dbxref=GenBank:WP_010393320.1;Name=WP_010393320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00060;product=hypothetical protein;protein_id=WP_010393320.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 6281 6499 . - . ID=gene-HGK48_RS00065;Name=HGK48_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00065 NZ_JAATTN010000001.1 GeneMarkS-2+ CDS 6281 6499 . - 0 ID=cds-WP_024305451.1;Parent=gene-HGK48_RS00065;Dbxref=GenBank:WP_024305451.1;Name=WP_024305451.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00065;product=hypothetical protein;protein_id=WP_024305451.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 6499 7011 . - . ID=gene-HGK48_RS00070;Name=HGK48_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00070 NZ_JAATTN010000001.1 GeneMarkS-2+ CDS 6499 7011 . - 0 ID=cds-WP_024305450.1;Parent=gene-HGK48_RS00070;Dbxref=GenBank:WP_024305450.1;Name=WP_024305450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00070;product=hypothetical protein;protein_id=WP_024305450.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 7067 7480 . - . ID=gene-HGK48_RS00075;Name=HGK48_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00075 NZ_JAATTN010000001.1 Protein Homology CDS 7067 7480 . - 0 ID=cds-WP_024305449.1;Parent=gene-HGK48_RS00075;Dbxref=GenBank:WP_024305449.1;Name=WP_024305449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850347.1;locus_tag=HGK48_RS00075;product=hypothetical protein;protein_id=WP_024305449.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 7593 7937 . - . ID=gene-HGK48_RS00080;Name=HGK48_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00080 NZ_JAATTN010000001.1 Protein Homology CDS 7593 7937 . - 0 ID=cds-WP_234446185.1;Parent=gene-HGK48_RS00080;Dbxref=GenBank:WP_234446185.1;Name=WP_234446185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016647486.1;locus_tag=HGK48_RS00080;product=DUF1937 family protein;protein_id=WP_234446185.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 7950 8195 . - . ID=gene-HGK48_RS00085;Name=HGK48_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00085 NZ_JAATTN010000001.1 GeneMarkS-2+ CDS 7950 8195 . - 0 ID=cds-WP_024305447.1;Parent=gene-HGK48_RS00085;Dbxref=GenBank:WP_024305447.1;Name=WP_024305447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00085;product=hypothetical protein;protein_id=WP_024305447.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 8209 9090 . - . ID=gene-HGK48_RS00090;Name=HGK48_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00090 NZ_JAATTN010000001.1 Protein Homology CDS 8209 9090 . - 0 ID=cds-WP_024305446.1;Parent=gene-HGK48_RS00090;Dbxref=GenBank:WP_024305446.1;Name=WP_024305446.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF017437.6;locus_tag=HGK48_RS00090;product=AAA family ATPase;protein_id=WP_024305446.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 9356 11935 . - . ID=gene-HGK48_RS00095;Name=HGK48_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00095 NZ_JAATTN010000001.1 GeneMarkS-2+ CDS 9356 11935 . - 0 ID=cds-WP_025370355.1;Parent=gene-HGK48_RS00095;Dbxref=GenBank:WP_025370355.1;Name=WP_025370355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00095;product=DDE-type integrase/transposase/recombinase;protein_id=WP_025370355.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 11937 12101 . - . ID=gene-HGK48_RS00100;Name=HGK48_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00100 NZ_JAATTN010000001.1 Protein Homology CDS 11937 12101 . - 0 ID=cds-WP_010401131.1;Parent=gene-HGK48_RS00100;Dbxref=GenBank:WP_010401131.1;Name=WP_010401131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848751.1;locus_tag=HGK48_RS00100;product=hypothetical protein;protein_id=WP_010401131.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 12335 12790 . - . ID=gene-HGK48_RS00105;Name=HGK48_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00105 NZ_JAATTN010000001.1 GeneMarkS-2+ CDS 12335 12790 . - 0 ID=cds-WP_010401134.1;Parent=gene-HGK48_RS00105;Dbxref=GenBank:WP_010401134.1;Name=WP_010401134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00105;product=hypothetical protein;protein_id=WP_010401134.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 12944 13684 . + . ID=gene-HGK48_RS00110;Name=HGK48_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00110 NZ_JAATTN010000001.1 Protein Homology CDS 12944 13684 . + 0 ID=cds-WP_025370356.1;Parent=gene-HGK48_RS00110;Dbxref=GenBank:WP_025370356.1;Name=WP_025370356.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651001.1;locus_tag=HGK48_RS00110;product=XRE family transcriptional regulator;protein_id=WP_025370356.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 13956 14339 . + . ID=gene-HGK48_RS00115;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=HGK48_RS00115 NZ_JAATTN010000001.1 Protein Homology CDS 13956 14339 . + 0 ID=cds-WP_002850111.1;Parent=gene-HGK48_RS00115;Dbxref=GenBank:WP_002850111.1;Name=WP_002850111.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147885.1;locus_tag=HGK48_RS00115;product=30S ribosomal protein S12;protein_id=WP_002850111.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 14406 14876 . + . ID=gene-HGK48_RS00120;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=HGK48_RS00120 NZ_JAATTN010000001.1 Protein Homology CDS 14406 14876 . + 0 ID=cds-WP_002850109.1;Parent=gene-HGK48_RS00120;Dbxref=GenBank:WP_002850109.1;Name=WP_002850109.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343926.1;locus_tag=HGK48_RS00120;product=30S ribosomal protein S7;protein_id=WP_002850109.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 14889 16964 . + . ID=gene-HGK48_RS00125;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=HGK48_RS00125 NZ_JAATTN010000001.1 Protein Homology CDS 14889 16964 . + 0 ID=cds-WP_002850108.1;Parent=gene-HGK48_RS00125;Dbxref=GenBank:WP_002850108.1;Name=WP_002850108.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343927.1;locus_tag=HGK48_RS00125;product=elongation factor G;protein_id=WP_002850108.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 17018 17094 . + . ID=gene-HGK48_RS00130;Name=HGK48_RS00130;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS00130 NZ_JAATTN010000001.1 tRNAscan-SE tRNA 17018 17094 . + . ID=rna-HGK48_RS00130;Parent=gene-HGK48_RS00130;anticodon=(pos:17052..17054);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS00130;product=tRNA-Arg NZ_JAATTN010000001.1 tRNAscan-SE exon 17018 17094 . + . ID=exon-HGK48_RS00130-1;Parent=rna-HGK48_RS00130;anticodon=(pos:17052..17054);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS00130;product=tRNA-Arg NZ_JAATTN010000001.1 RefSeq gene 17366 17560 . - . ID=gene-HGK48_RS00135;Name=HGK48_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00135 NZ_JAATTN010000001.1 GeneMarkS-2+ CDS 17366 17560 . - 0 ID=cds-WP_010401894.1;Parent=gene-HGK48_RS00135;Dbxref=GenBank:WP_010401894.1;Name=WP_010401894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00135;product=hypothetical protein;protein_id=WP_010401894.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 18141 19775 . - . ID=gene-HGK48_RS00140;Name=HGK48_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00140 NZ_JAATTN010000001.1 Protein Homology CDS 18141 19775 . - 0 ID=cds-WP_168236617.1;Parent=gene-HGK48_RS00140;Dbxref=GenBank:WP_168236617.1;Name=WP_168236617.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731727.1;locus_tag=HGK48_RS00140;product=methyl-accepting chemotaxis protein;protein_id=WP_168236617.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 20017 21309 . - . ID=gene-HGK48_RS00145;Name=HGK48_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00145 NZ_JAATTN010000001.1 Protein Homology CDS 20017 21309 . - 0 ID=cds-WP_002848200.1;Parent=gene-HGK48_RS00145;Dbxref=GenBank:WP_002848200.1;Name=WP_002848200.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848200.1;locus_tag=HGK48_RS00145;product=MFS transporter;protein_id=WP_002848200.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 21428 22189 . - . ID=gene-HGK48_RS00150;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=HGK48_RS00150 NZ_JAATTN010000001.1 Protein Homology CDS 21428 22189 . - 0 ID=cds-WP_002848198.1;Parent=gene-HGK48_RS00150;Dbxref=GenBank:WP_002848198.1;Name=WP_002848198.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848198.1;locus_tag=HGK48_RS00150;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_002848198.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 22200 23039 . - . ID=gene-HGK48_RS00155;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=HGK48_RS00155 NZ_JAATTN010000001.1 Protein Homology CDS 22200 23039 . - 0 ID=cds-WP_002848196.1;Parent=gene-HGK48_RS00155;Dbxref=GenBank:WP_002848196.1;Name=WP_002848196.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848196.1;locus_tag=HGK48_RS00155;product=phosphate ABC transporter permease PstA;protein_id=WP_002848196.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 23036 23911 . - . ID=gene-HGK48_RS00160;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=HGK48_RS00160 NZ_JAATTN010000001.1 Protein Homology CDS 23036 23911 . - 0 ID=cds-WP_002848193.1;Parent=gene-HGK48_RS00160;Dbxref=GenBank:WP_002848193.1;Name=WP_002848193.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848193.1;locus_tag=HGK48_RS00160;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_002848193.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 23974 24996 . - . ID=gene-HGK48_RS00165;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=HGK48_RS00165 NZ_JAATTN010000001.1 Protein Homology CDS 23974 24996 . - 0 ID=cds-WP_002848191.1;Parent=gene-HGK48_RS00165;Dbxref=GenBank:WP_002848191.1;Name=WP_002848191.1;Ontology_term=GO:0006817,GO:0035435,GO:0015415,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;go_process=phosphate ion transport|0006817||IEA,phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731726.1;locus_tag=HGK48_RS00165;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_002848191.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 25106 25888 . - . ID=gene-HGK48_RS00170;Name=HGK48_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00170 NZ_JAATTN010000001.1 Protein Homology CDS 25106 25888 . - 0 ID=cds-WP_002848188.1;Parent=gene-HGK48_RS00170;Dbxref=GenBank:WP_002848188.1;Name=WP_002848188.1;Ontology_term=GO:0006790,GO:0050427,GO:0000287,GO:0008441;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA,3'-phosphoadenosine 5'-phosphosulfate metabolic process|0050427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848188.1;locus_tag=HGK48_RS00170;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ family protein;protein_id=WP_002848188.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 25885 27162 . - . ID=gene-HGK48_RS00175;Name=HGK48_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00175 NZ_JAATTN010000001.1 Protein Homology CDS 25885 27162 . - 0 ID=cds-WP_002848186.1;Parent=gene-HGK48_RS00175;Dbxref=GenBank:WP_002848186.1;Name=WP_002848186.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848186.1;locus_tag=HGK48_RS00175;product=citrate synthase;protein_id=WP_002848186.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 27244 28410 . - . ID=gene-HGK48_RS00180;Name=HGK48_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00180 NZ_JAATTN010000001.1 Protein Homology CDS 27244 28410 . - 0 ID=cds-WP_002848184.1;Parent=gene-HGK48_RS00180;Dbxref=GenBank:WP_002848184.1;Name=WP_002848184.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731725.1;locus_tag=HGK48_RS00180;product=cation:proton antiporter;protein_id=WP_002848184.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 28391 29233 . - . ID=gene-HGK48_RS00185;Name=HGK48_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00185 NZ_JAATTN010000001.1 Protein Homology CDS 28391 29233 . - 0 ID=cds-WP_002848183.1;Parent=gene-HGK48_RS00185;Dbxref=GenBank:WP_002848183.1;Name=WP_002848183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848183.1;locus_tag=HGK48_RS00185;product=biotin synthase;protein_id=WP_002848183.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 29226 31310 . - . ID=gene-HGK48_RS00190;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=HGK48_RS00190 NZ_JAATTN010000001.1 Protein Homology CDS 29226 31310 . - 0 ID=cds-WP_011731723.1;Parent=gene-HGK48_RS00190;Dbxref=GenBank:WP_011731723.1;Name=WP_011731723.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731723.1;locus_tag=HGK48_RS00190;product=type I DNA topoisomerase;protein_id=WP_011731723.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 31425 32078 . - . ID=gene-HGK48_RS00195;Name=HGK48_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00195 NZ_JAATTN010000001.1 Protein Homology CDS 31425 32078 . - 0 ID=cds-WP_002848181.1;Parent=gene-HGK48_RS00195;Dbxref=GenBank:WP_002848181.1;Name=WP_002848181.1;Ontology_term=GO:0055085,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848181.1;locus_tag=HGK48_RS00195;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_002848181.1;transl_table=11 NZ_JAATTN010000001.1 RefSeq gene 32075 32577 . - . ID=gene-HGK48_RS00200;Name=HGK48_RS00200;end_range=32577,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00200;partial=true NZ_JAATTN010000001.1 Protein Homology CDS 32075 32577 . - 2 ID=cds-WP_168236618.1;Parent=gene-HGK48_RS00200;Dbxref=GenBank:WP_168236618.1;Name=WP_168236618.1;Ontology_term=GO:0055085;end_range=32577,.;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731722.1;locus_tag=HGK48_RS00200;partial=true;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_168236618.1;transl_table=11 ##sequence-region NZ_JAATTN010000200.1 1 3345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000200.1 RefSeq region 1 3345 . + . ID=NZ_JAATTN010000200.1:1..3345;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000200.1 RefSeq gene 59 1366 . - . ID=gene-HGK48_RS08245;Name=HGK48_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08245 NZ_JAATTN010000200.1 Protein Homology CDS 59 1366 . - 0 ID=cds-WP_010401553.1;Parent=gene-HGK48_RS08245;Dbxref=GenBank:WP_010401553.1;Name=WP_010401553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010401553.1;locus_tag=HGK48_RS08245;product=coproporphyrinogen III oxidase family protein;protein_id=WP_010401553.1;transl_table=11 NZ_JAATTN010000200.1 RefSeq gene 1454 2125 . - . ID=gene-HGK48_RS08250;Name=HGK48_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08250 NZ_JAATTN010000200.1 GeneMarkS-2+ CDS 1454 2125 . - 0 ID=cds-WP_002850741.1;Parent=gene-HGK48_RS08250;Dbxref=GenBank:WP_002850741.1;Name=WP_002850741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08250;product=thioredoxin domain-containing protein;protein_id=WP_002850741.1;transl_table=11 NZ_JAATTN010000200.1 RefSeq gene 2135 2632 . - . ID=gene-HGK48_RS08255;Name=HGK48_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08255 NZ_JAATTN010000200.1 Protein Homology CDS 2135 2632 . - 0 ID=cds-WP_002850740.1;Parent=gene-HGK48_RS08255;Dbxref=GenBank:WP_002850740.1;Name=WP_002850740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850740.1;locus_tag=HGK48_RS08255;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_002850740.1;transl_table=11 NZ_JAATTN010000200.1 RefSeq gene 2635 3345 . - . ID=gene-HGK48_RS08260;Name=HGK48_RS08260;end_range=3345,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08260;partial=true NZ_JAATTN010000200.1 Protein Homology CDS 2635 3345 . - 0 ID=cds-WP_168236833.1;Parent=gene-HGK48_RS08260;Dbxref=GenBank:WP_168236833.1;Name=WP_168236833.1;Ontology_term=GO:0051287;end_range=3345,.;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850739.1;locus_tag=HGK48_RS08260;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=WP_168236833.1;transl_table=11 ##sequence-region NZ_JAATTN010000201.1 1 3395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000201.1 RefSeq region 1 3395 . + . ID=NZ_JAATTN010000201.1:1..3395;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000201.1 RefSeq gene 129 995 . + . ID=gene-HGK48_RS08265;Name=HGK48_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08265 NZ_JAATTN010000201.1 GeneMarkS-2+ CDS 129 995 . + 0 ID=cds-WP_011731819.1;Parent=gene-HGK48_RS08265;Dbxref=GenBank:WP_011731819.1;Name=WP_011731819.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08265;product=hypothetical protein;protein_id=WP_011731819.1;transl_table=11 NZ_JAATTN010000201.1 RefSeq pseudogene 1037 3301 . + . ID=gene-HGK48_RS08270;Name=nosZ;end_range=3301,.;gbkey=Gene;gene=nosZ;gene_biotype=pseudogene;locus_tag=HGK48_RS08270;partial=true;pseudo=true NZ_JAATTN010000201.1 Protein Homology CDS 1037 3301 . + 0 ID=cds-HGK48_RS08270;Parent=gene-HGK48_RS08270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019333,GO:0050304;end_range=3301,.;gbkey=CDS;gene=nosZ;go_function=nitrous-oxide reductase activity|0050304||IEA;go_process=denitrification pathway|0019333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731820.1;locus_tag=HGK48_RS08270;partial=true;product=Sec-dependent nitrous-oxide reductase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000202.1 1 3313 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000202.1 RefSeq region 1 3313 . + . ID=NZ_JAATTN010000202.1:1..3313;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000202.1 RefSeq gene 134 1621 . - . ID=gene-HGK48_RS08275;Name=HGK48_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08275 NZ_JAATTN010000202.1 GeneMarkS-2+ CDS 134 1621 . - 0 ID=cds-WP_011732039.1;Parent=gene-HGK48_RS08275;Dbxref=GenBank:WP_011732039.1;Name=WP_011732039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08275;product=hypothetical protein;protein_id=WP_011732039.1;transl_table=11 NZ_JAATTN010000202.1 RefSeq gene 1689 2558 . - . ID=gene-HGK48_RS08280;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=HGK48_RS08280 NZ_JAATTN010000202.1 Protein Homology CDS 1689 2558 . - 0 ID=cds-WP_024305437.1;Parent=gene-HGK48_RS08280;Dbxref=GenBank:WP_024305437.1;Name=WP_024305437.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732038.1;locus_tag=HGK48_RS08280;product=GTPase Era;protein_id=WP_024305437.1;transl_table=11 NZ_JAATTN010000202.1 RefSeq gene 2555 3313 . - . ID=gene-HGK48_RS08285;Name=hslU;end_range=3313,.;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=HGK48_RS08285;partial=true NZ_JAATTN010000202.1 Protein Homology CDS 2555 3313 . - 0 ID=cds-WP_168236834.1;Parent=gene-HGK48_RS08285;Dbxref=GenBank:WP_168236834.1;Name=WP_168236834.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;end_range=3313,.;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344086.1;locus_tag=HGK48_RS08285;partial=true;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_168236834.1;transl_table=11 ##sequence-region NZ_JAATTN010000203.1 1 3380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000203.1 RefSeq region 1 3380 . + . ID=NZ_JAATTN010000203.1:1..3380;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000203.1 RefSeq gene 149 667 . - . ID=gene-HGK48_RS08295;Name=HGK48_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08295 NZ_JAATTN010000203.1 Protein Homology CDS 149 667 . - 0 ID=cds-WP_002849393.1;Parent=gene-HGK48_RS08295;Dbxref=GenBank:WP_002849393.1;Name=WP_002849393.1;Ontology_term=GO:0006508,GO:0004252,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849393.1;locus_tag=HGK48_RS08295;product=rhomboid family intramembrane serine protease;protein_id=WP_002849393.1;transl_table=11 NZ_JAATTN010000203.1 RefSeq gene 862 1596 . + . ID=gene-HGK48_RS08300;Name=HGK48_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08300 NZ_JAATTN010000203.1 Protein Homology CDS 862 1596 . + 0 ID=cds-WP_011731990.1;Parent=gene-HGK48_RS08300;Dbxref=GenBank:WP_011731990.1;Name=WP_011731990.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731990.1;locus_tag=HGK48_RS08300;product=(Fe-S)-binding protein;protein_id=WP_011731990.1;transl_table=11 NZ_JAATTN010000203.1 RefSeq gene 1593 3017 . + . ID=gene-HGK48_RS08305;Name=HGK48_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08305 NZ_JAATTN010000203.1 Protein Homology CDS 1593 3017 . + 0 ID=cds-WP_002849394.1;Parent=gene-HGK48_RS08305;Dbxref=GenBank:WP_002849394.1;Name=WP_002849394.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849394.1;locus_tag=HGK48_RS08305;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_002849394.1;transl_table=11 NZ_JAATTN010000203.1 RefSeq gene 3010 3380 . + . ID=gene-HGK48_RS08310;Name=HGK48_RS08310;end_range=3380,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08310;partial=true NZ_JAATTN010000203.1 GeneMarkS-2+ CDS 3010 3380 . + 0 ID=cds-WP_168236835.1;Parent=gene-HGK48_RS08310;Dbxref=GenBank:WP_168236835.1;Name=WP_168236835.1;end_range=3380,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08310;partial=true;product=hypothetical protein;protein_id=WP_168236835.1;transl_table=11 ##sequence-region NZ_JAATTN010000204.1 1 3368 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000204.1 RefSeq region 1 3368 . + . ID=NZ_JAATTN010000204.1:1..3368;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000204.1 RefSeq gene 97 555 . + . ID=gene-HGK48_RS08315;Name=HGK48_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08315 NZ_JAATTN010000204.1 Protein Homology CDS 97 555 . + 0 ID=cds-WP_002849548.1;Parent=gene-HGK48_RS08315;Dbxref=GenBank:WP_002849548.1;Name=WP_002849548.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849548.1;locus_tag=HGK48_RS08315;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_002849548.1;transl_table=11 NZ_JAATTN010000204.1 RefSeq gene 622 1638 . - . ID=gene-HGK48_RS08320;Name=HGK48_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08320 NZ_JAATTN010000204.1 Protein Homology CDS 622 1638 . - 0 ID=cds-WP_002849550.1;Parent=gene-HGK48_RS08320;Dbxref=GenBank:WP_002849550.1;Name=WP_002849550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016647200.1;locus_tag=HGK48_RS08320;product=bifunctional 3%2C4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_002849550.1;transl_table=11 NZ_JAATTN010000204.1 RefSeq gene 1813 2256 . + . ID=gene-HGK48_RS08325;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=HGK48_RS08325 NZ_JAATTN010000204.1 Protein Homology CDS 1813 2256 . + 0 ID=cds-WP_002849551.1;Parent=gene-HGK48_RS08325;Dbxref=GenBank:WP_002849551.1;Name=WP_002849551.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849551.1;locus_tag=HGK48_RS08325;product=50S ribosomal protein L9;protein_id=WP_002849551.1;transl_table=11 NZ_JAATTN010000204.1 RefSeq gene 2256 2798 . + . ID=gene-HGK48_RS08330;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=HGK48_RS08330 NZ_JAATTN010000204.1 Protein Homology CDS 2256 2798 . + 0 ID=cds-WP_002849553.1;Parent=gene-HGK48_RS08330;Dbxref=GenBank:WP_002849553.1;Name=WP_002849553.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344087.1;locus_tag=HGK48_RS08330;product=ATP-dependent protease subunit HslV;protein_id=WP_002849553.1;transl_table=11 NZ_JAATTN010000204.1 RefSeq gene 2795 3368 . + . ID=gene-HGK48_RS08335;Name=HGK48_RS08335;end_range=3368,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08335;partial=true NZ_JAATTN010000204.1 Protein Homology CDS 2795 3368 . + 0 ID=cds-WP_168236836.1;Parent=gene-HGK48_RS08335;Dbxref=GenBank:WP_168236836.1;Name=WP_168236836.1;Ontology_term=GO:0005524,GO:0016887;end_range=3368,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004277779.1;locus_tag=HGK48_RS08335;partial=true;product=AAA family ATPase;protein_id=WP_168236836.1;transl_table=11 ##sequence-region NZ_JAATTN010000205.1 1 3286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000205.1 RefSeq region 1 3286 . + . ID=NZ_JAATTN010000205.1:1..3286;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000205.1 RefSeq gene 1 615 . + . ID=gene-HGK48_RS08340;Name=HGK48_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08340;partial=true;start_range=.,1 NZ_JAATTN010000205.1 GeneMarkS-2+ CDS 1 615 . + 0 ID=cds-WP_168236837.1;Parent=gene-HGK48_RS08340;Dbxref=GenBank:WP_168236837.1;Name=WP_168236837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08340;partial=true;product=ParA family protein;protein_id=WP_168236837.1;start_range=.,1;transl_table=11 NZ_JAATTN010000205.1 RefSeq gene 628 891 . + . ID=gene-HGK48_RS08345;Name=HGK48_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08345 NZ_JAATTN010000205.1 Protein Homology CDS 628 891 . + 0 ID=cds-WP_035170821.1;Parent=gene-HGK48_RS08345;Dbxref=GenBank:WP_035170821.1;Name=WP_035170821.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF046164.2;locus_tag=HGK48_RS08345;product=plasmid mobilization protein;protein_id=WP_035170821.1;transl_table=11 NZ_JAATTN010000205.1 RefSeq gene 991 1287 . + . ID=gene-HGK48_RS08350;Name=HGK48_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08350 NZ_JAATTN010000205.1 Protein Homology CDS 991 1287 . + 0 ID=cds-WP_051936686.1;Parent=gene-HGK48_RS08350;Dbxref=GenBank:WP_051936686.1;Name=WP_051936686.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=HGK48_RS08350;product=helix-turn-helix domain-containing protein;protein_id=WP_051936686.1;transl_table=11 NZ_JAATTN010000205.1 RefSeq gene 1298 1720 . + . ID=gene-HGK48_RS08355;Name=HGK48_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08355 NZ_JAATTN010000205.1 Protein Homology CDS 1298 1720 . + 0 ID=cds-WP_051936685.1;Parent=gene-HGK48_RS08355;Dbxref=GenBank:WP_051936685.1;Name=WP_051936685.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012920.6;locus_tag=HGK48_RS08355;product=S24 family peptidase;protein_id=WP_051936685.1;transl_table=11 NZ_JAATTN010000205.1 RefSeq gene 1853 3103 . - . ID=gene-HGK48_RS08360;Name=HGK48_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08360 NZ_JAATTN010000205.1 Protein Homology CDS 1853 3103 . - 0 ID=cds-WP_168236838.1;Parent=gene-HGK48_RS08360;Dbxref=GenBank:WP_168236838.1;Name=WP_168236838.1;Ontology_term=GO:0016310,GO:0004674,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006564015.1;locus_tag=HGK48_RS08360;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_168236838.1;transl_table=11 ##sequence-region NZ_JAATTN010000206.1 1 3294 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000206.1 RefSeq region 1 3294 . + . ID=NZ_JAATTN010000206.1:1..3294;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000206.1 RefSeq gene 1 944 . - . ID=gene-HGK48_RS08365;Name=HGK48_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08365;partial=true;start_range=.,1 NZ_JAATTN010000206.1 GeneMarkS-2+ CDS 1 944 . - 0 ID=cds-WP_168236839.1;Parent=gene-HGK48_RS08365;Dbxref=GenBank:WP_168236839.1;Name=WP_168236839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08365;partial=true;product=AAA family ATPase;protein_id=WP_168236839.1;start_range=.,1;transl_table=11 NZ_JAATTN010000206.1 RefSeq gene 954 1907 . - . ID=gene-HGK48_RS08370;Name=HGK48_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08370 NZ_JAATTN010000206.1 Protein Homology CDS 954 1907 . - 0 ID=cds-WP_002849044.1;Parent=gene-HGK48_RS08370;Dbxref=GenBank:WP_002849044.1;Name=WP_002849044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849044.1;locus_tag=HGK48_RS08370;product=NAD(P)-binding domain-containing protein;protein_id=WP_002849044.1;transl_table=11 NZ_JAATTN010000206.1 RefSeq gene 1986 3209 . + . ID=gene-HGK48_RS08375;Name=HGK48_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08375 NZ_JAATTN010000206.1 Protein Homology CDS 1986 3209 . + 0 ID=cds-WP_002849042.1;Parent=gene-HGK48_RS08375;Dbxref=GenBank:WP_002849042.1;Name=WP_002849042.1;Ontology_term=GO:0055129,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849042.1;locus_tag=HGK48_RS08375;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_002849042.1;transl_table=11 ##sequence-region NZ_JAATTN010000207.1 1 3289 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000207.1 RefSeq region 1 3289 . + . ID=NZ_JAATTN010000207.1:1..3289;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000207.1 RefSeq pseudogene 1 245 . + . ID=gene-HGK48_RS08380;Name=HGK48_RS08380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08380;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000207.1 GeneMarkS-2+ CDS 1 245 . + 2 ID=cds-HGK48_RS08380;Parent=gene-HGK48_RS08380;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08380;partial=true;product=SH3 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000207.1 RefSeq gene 229 906 . + . ID=gene-HGK48_RS08385;Name=HGK48_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08385 NZ_JAATTN010000207.1 Protein Homology CDS 229 906 . + 0 ID=cds-WP_011732014.1;Parent=gene-HGK48_RS08385;Dbxref=GenBank:WP_011732014.1;Name=WP_011732014.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732014.1;locus_tag=HGK48_RS08385;product=lysophospholipid acyltransferase family protein;protein_id=WP_011732014.1;transl_table=11 NZ_JAATTN010000207.1 RefSeq gene 903 1289 . + . ID=gene-HGK48_RS08390;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=HGK48_RS08390 NZ_JAATTN010000207.1 Protein Homology CDS 903 1289 . + 0 ID=cds-WP_002849487.1;Parent=gene-HGK48_RS08390;Dbxref=GenBank:WP_002849487.1;Name=WP_002849487.1;Ontology_term=GO:1903424,GO:1903425,GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;go_function=fluoride transmembrane transporter activity|1903425||IEA;go_process=fluoride transmembrane transport|1903424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849487.1;locus_tag=HGK48_RS08390;product=fluoride efflux transporter CrcB;protein_id=WP_002849487.1;transl_table=11 NZ_JAATTN010000207.1 RefSeq gene 1316 1867 . - . ID=gene-HGK48_RS08395;Name=HGK48_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08395 NZ_JAATTN010000207.1 Protein Homology CDS 1316 1867 . - 0 ID=cds-WP_002849488.1;Parent=gene-HGK48_RS08395;Dbxref=GenBank:WP_002849488.1;Name=WP_002849488.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015463.6;locus_tag=HGK48_RS08395;product=RICIN domain-containing protein;protein_id=WP_002849488.1;transl_table=11 NZ_JAATTN010000207.1 RefSeq gene 1877 2671 . - . ID=gene-HGK48_RS08400;Name=HGK48_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08400 NZ_JAATTN010000207.1 Protein Homology CDS 1877 2671 . - 0 ID=cds-WP_002849489.1;Parent=gene-HGK48_RS08400;Dbxref=GenBank:WP_002849489.1;Name=WP_002849489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011049588.1;locus_tag=HGK48_RS08400;product=cytolethal distending toxin subunit B family protein;protein_id=WP_002849489.1;transl_table=11 NZ_JAATTN010000207.1 RefSeq gene 2681 3289 . - . ID=gene-HGK48_RS08405;Name=HGK48_RS08405;end_range=3289,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08405;partial=true NZ_JAATTN010000207.1 Protein Homology CDS 2681 3289 . - 0 ID=cds-WP_168236840.1;Parent=gene-HGK48_RS08405;Dbxref=GenBank:WP_168236840.1;Name=WP_168236840.1;end_range=3289,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849490.1;locus_tag=HGK48_RS08405;partial=true;product=RICIN domain-containing protein;protein_id=WP_168236840.1;transl_table=11 ##sequence-region NZ_JAATTN010000208.1 1 3275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000208.1 RefSeq region 1 3275 . + . ID=NZ_JAATTN010000208.1:1..3275;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000208.1 RefSeq gene 1 208 . + . ID=gene-HGK48_RS08410;Name=HGK48_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08410;partial=true;start_range=.,1 NZ_JAATTN010000208.1 GeneMarkS-2+ CDS 1 208 . + 1 ID=cds-WP_168236841.1;Parent=gene-HGK48_RS08410;Dbxref=GenBank:WP_168236841.1;Name=WP_168236841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08410;partial=true;product=hypothetical protein;protein_id=WP_168236841.1;start_range=.,1;transl_table=11 NZ_JAATTN010000208.1 RefSeq gene 300 1325 . - . ID=gene-HGK48_RS08415;Name=HGK48_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08415 NZ_JAATTN010000208.1 Protein Homology CDS 300 1325 . - 0 ID=cds-WP_002850416.1;Parent=gene-HGK48_RS08415;Dbxref=GenBank:WP_002850416.1;Name=WP_002850416.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850416.1;locus_tag=HGK48_RS08415;product=c-type cytochrome;protein_id=WP_002850416.1;transl_table=11 NZ_JAATTN010000208.1 RefSeq gene 1322 2569 . - . ID=gene-HGK48_RS08420;Name=HGK48_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08420 NZ_JAATTN010000208.1 Protein Homology CDS 1322 2569 . - 0 ID=cds-WP_002850415.1;Parent=gene-HGK48_RS08420;Dbxref=GenBank:WP_002850415.1;Name=WP_002850415.1;Ontology_term=GO:0022904,GO:0008121,GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=quinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850415.1;locus_tag=HGK48_RS08420;product=cytochrome b;protein_id=WP_002850415.1;transl_table=11 NZ_JAATTN010000208.1 RefSeq gene 2580 3086 . - . ID=gene-HGK48_RS08425;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=HGK48_RS08425 NZ_JAATTN010000208.1 Protein Homology CDS 2580 3086 . - 0 ID=cds-WP_002850414.1;Parent=gene-HGK48_RS08425;Dbxref=GenBank:WP_002850414.1;Name=WP_002850414.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=quinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939267.1;locus_tag=HGK48_RS08425;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=WP_002850414.1;transl_table=11 ##sequence-region NZ_JAATTN010000209.1 1 3263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000209.1 RefSeq region 1 3263 . + . ID=NZ_JAATTN010000209.1:1..3263;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000209.1 RefSeq gene 1 2017 . + . ID=gene-HGK48_RS08430;Name=HGK48_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08430;partial=true;start_range=.,1 NZ_JAATTN010000209.1 Protein Homology CDS 1 2017 . + 1 ID=cds-WP_168236842.1;Parent=gene-HGK48_RS08430;Dbxref=GenBank:WP_168236842.1;Name=WP_168236842.1;Ontology_term=GO:0006396,GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=RNA processing|0006396||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850035.1;locus_tag=HGK48_RS08430;partial=true;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_168236842.1;start_range=.,1;transl_table=11 NZ_JAATTN010000209.1 RefSeq gene 2039 2887 . + . ID=gene-HGK48_RS08435;Name=HGK48_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08435 NZ_JAATTN010000209.1 Protein Homology CDS 2039 2887 . + 0 ID=cds-WP_002850032.1;Parent=gene-HGK48_RS08435;Dbxref=GenBank:WP_002850032.1;Name=WP_002850032.1;Ontology_term=GO:0050896,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850032.1;locus_tag=HGK48_RS08435;product=universal stress protein;protein_id=WP_002850032.1;transl_table=11 NZ_JAATTN010000209.1 RefSeq gene 2913 3263 . - . ID=gene-HGK48_RS08440;Name=HGK48_RS08440;end_range=3263,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08440;partial=true NZ_JAATTN010000209.1 Protein Homology CDS 2913 3263 . - 0 ID=cds-WP_206120317.1;Parent=gene-HGK48_RS08440;Dbxref=GenBank:WP_206120317.1;Name=WP_206120317.1;end_range=3263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002843624.1;locus_tag=HGK48_RS08440;partial=true;product=histidine triad nucleotide-binding protein;protein_id=WP_206120317.1;transl_table=11 ##sequence-region NZ_JAATTN010000020.1 1 13372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000020.1 RefSeq region 1 13372 . + . ID=NZ_JAATTN010000020.1:1..13372;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000020.1 RefSeq gene 1 409 . - . ID=gene-HGK48_RS02010;Name=HGK48_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02010;partial=true;start_range=.,1 NZ_JAATTN010000020.1 Protein Homology CDS 1 409 . - 0 ID=cds-WP_168236658.1;Parent=gene-HGK48_RS02010;Dbxref=GenBank:WP_168236658.1;Name=WP_168236658.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024212.6;locus_tag=HGK48_RS02010;partial=true;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_168236658.1;start_range=.,1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 544 1926 . - . ID=gene-HGK48_RS02015;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=HGK48_RS02015 NZ_JAATTN010000020.1 Protein Homology CDS 544 1926 . - 0 ID=cds-WP_002850586.1;Parent=gene-HGK48_RS02015;Dbxref=GenBank:WP_002850586.1;Name=WP_002850586.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732243.1;locus_tag=HGK48_RS02015;product=glutamate--tRNA ligase;protein_id=WP_002850586.1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 2000 2827 . + . ID=gene-HGK48_RS02020;Name=HGK48_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02020 NZ_JAATTN010000020.1 Protein Homology CDS 2000 2827 . + 0 ID=cds-WP_002850588.1;Parent=gene-HGK48_RS02020;Dbxref=GenBank:WP_002850588.1;Name=WP_002850588.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: protein motif:HMM:NF046756.2;locus_tag=HGK48_RS02020;product=peptidylprolyl isomerase;protein_id=WP_002850588.1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 2866 4203 . - . ID=gene-HGK48_RS02025;Name=HGK48_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02025 NZ_JAATTN010000020.1 Protein Homology CDS 2866 4203 . - 0 ID=cds-WP_002850590.1;Parent=gene-HGK48_RS02025;Dbxref=GenBank:WP_002850590.1;Name=WP_002850590.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850590.1;locus_tag=HGK48_RS02025;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002850590.1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 4200 4652 . - . ID=gene-HGK48_RS02030;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=HGK48_RS02030 NZ_JAATTN010000020.1 Protein Homology CDS 4200 4652 . - 0 ID=cds-WP_002850595.1;Parent=gene-HGK48_RS02030;Dbxref=GenBank:WP_002850595.1;Name=WP_002850595.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002878577.1;locus_tag=HGK48_RS02030;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_002850595.1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 4948 5508 . + . ID=gene-HGK48_RS02035;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=HGK48_RS02035 NZ_JAATTN010000020.1 Protein Homology CDS 4948 5508 . + 0 ID=cds-WP_002850597.1;Parent=gene-HGK48_RS02035;Dbxref=GenBank:WP_002850597.1;Name=WP_002850597.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344682.1;locus_tag=HGK48_RS02035;product=dCTP deaminase;protein_id=WP_002850597.1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 5516 6637 . + . ID=gene-HGK48_RS02040;Name=pseC;gbkey=Gene;gene=pseC;gene_biotype=protein_coding;locus_tag=HGK48_RS02040 NZ_JAATTN010000020.1 Protein Homology CDS 5516 6637 . + 0 ID=cds-WP_024305414.1;Parent=gene-HGK48_RS02040;Dbxref=GenBank:WP_024305414.1;Name=WP_024305414.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pseC;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002945505.1;locus_tag=HGK48_RS02040;product=UDP-4-amino-4%2C6-dideoxy-N-acetyl-beta-L-altrosamine transaminase;protein_id=WP_024305414.1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 6701 7963 . - . ID=gene-HGK48_RS02045;Name=HGK48_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02045 NZ_JAATTN010000020.1 Protein Homology CDS 6701 7963 . - 0 ID=cds-WP_002850600.1;Parent=gene-HGK48_RS02045;Dbxref=GenBank:WP_002850600.1;Name=WP_002850600.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850600.1;locus_tag=HGK48_RS02045;product=(Fe-S)-binding protein;protein_id=WP_002850600.1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 7964 8710 . - . ID=gene-HGK48_RS02050;Name=HGK48_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02050 NZ_JAATTN010000020.1 Protein Homology CDS 7964 8710 . - 0 ID=cds-WP_002850602.1;Parent=gene-HGK48_RS02050;Dbxref=GenBank:WP_002850602.1;Name=WP_002850602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850602.1;locus_tag=HGK48_RS02050;product=pyrroline-5-carboxylate reductase;protein_id=WP_002850602.1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 8707 9531 . - . ID=gene-HGK48_RS02055;Name=HGK48_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02055 NZ_JAATTN010000020.1 Protein Homology CDS 8707 9531 . - 0 ID=cds-WP_002850604.1;Parent=gene-HGK48_RS02055;Dbxref=GenBank:WP_002850604.1;Name=WP_002850604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850604.1;locus_tag=HGK48_RS02055;product=DUF5718 family protein;protein_id=WP_002850604.1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 9552 10913 . - . ID=gene-HGK48_RS02060;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=HGK48_RS02060 NZ_JAATTN010000020.1 Protein Homology CDS 9552 10913 . - 0 ID=cds-WP_002850606.1;Parent=gene-HGK48_RS02060;Dbxref=GenBank:WP_002850606.1;Name=WP_002850606.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020247010.1;locus_tag=HGK48_RS02060;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_002850606.1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 10913 11350 . - . ID=gene-HGK48_RS02065;Name=HGK48_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02065 NZ_JAATTN010000020.1 Protein Homology CDS 10913 11350 . - 0 ID=cds-WP_010400169.1;Parent=gene-HGK48_RS02065;Dbxref=GenBank:WP_010400169.1;Name=WP_010400169.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022245.6;locus_tag=HGK48_RS02065;product=DUF2603 domain-containing protein;protein_id=WP_010400169.1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 11343 12272 . - . ID=gene-HGK48_RS02070;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=HGK48_RS02070 NZ_JAATTN010000020.1 Protein Homology CDS 11343 12272 . - 0 ID=cds-WP_002850612.1;Parent=gene-HGK48_RS02070;Dbxref=GenBank:WP_002850612.1;Name=WP_002850612.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850612.1;locus_tag=HGK48_RS02070;product=ornithine carbamoyltransferase;protein_id=WP_002850612.1;transl_table=11 NZ_JAATTN010000020.1 RefSeq gene 12281 13258 . - . ID=gene-HGK48_RS02075;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=HGK48_RS02075 NZ_JAATTN010000020.1 Protein Homology CDS 12281 13258 . - 0 ID=cds-WP_002850614.1;Parent=gene-HGK48_RS02075;Dbxref=GenBank:WP_002850614.1;Name=WP_002850614.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850614.1;locus_tag=HGK48_RS02075;product=porphobilinogen synthase;protein_id=WP_002850614.1;transl_table=11 ##sequence-region NZ_JAATTN010000210.1 1 3258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000210.1 RefSeq region 1 3258 . + . ID=NZ_JAATTN010000210.1:1..3258;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000210.1 RefSeq gene 1 271 . + . ID=gene-HGK48_RS08445;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=HGK48_RS08445;partial=true;start_range=.,1 NZ_JAATTN010000210.1 Protein Homology CDS 1 271 . + 1 ID=cds-WP_168236844.1;Parent=gene-HGK48_RS08445;Dbxref=GenBank:WP_168236844.1;Name=WP_168236844.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: protein motif:HMM:TIGR03170.1;locus_tag=HGK48_RS08445;partial=true;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_168236844.1;start_range=.,1;transl_table=11 NZ_JAATTN010000210.1 RefSeq gene 275 754 . + . ID=gene-HGK48_RS08450;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=HGK48_RS08450 NZ_JAATTN010000210.1 Protein Homology CDS 275 754 . + 0 ID=cds-WP_002849399.1;Parent=gene-HGK48_RS08450;Dbxref=GenBank:WP_002849399.1;Name=WP_002849399.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849399.1;locus_tag=HGK48_RS08450;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_002849399.1;transl_table=11 NZ_JAATTN010000210.1 RefSeq gene 748 1326 . + . ID=gene-HGK48_RS08455;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=HGK48_RS08455 NZ_JAATTN010000210.1 Protein Homology CDS 748 1326 . + 0 ID=cds-WP_024305501.1;Parent=gene-HGK48_RS08455;Dbxref=GenBank:WP_024305501.1;Name=WP_024305501.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731993.1;locus_tag=HGK48_RS08455;product=dTMP kinase;protein_id=WP_024305501.1;transl_table=11 NZ_JAATTN010000210.1 RefSeq gene 1323 2552 . + . ID=gene-HGK48_RS08460;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=HGK48_RS08460 NZ_JAATTN010000210.1 Protein Homology CDS 1323 2552 . + 0 ID=cds-WP_011731994.1;Parent=gene-HGK48_RS08460;Dbxref=GenBank:WP_011731994.1;Name=WP_011731994.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731994.1;locus_tag=HGK48_RS08460;product=histidine--tRNA ligase;protein_id=WP_011731994.1;transl_table=11 NZ_JAATTN010000210.1 RefSeq pseudogene 2549 3079 . + . ID=gene-HGK48_RS08465;Name=HGK48_RS08465;end_range=3079,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08465;partial=true;pseudo=true NZ_JAATTN010000210.1 Protein Homology CDS 2549 3079 . + 0 ID=cds-HGK48_RS08465;Parent=gene-HGK48_RS08465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3079,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849401.1;locus_tag=HGK48_RS08465;partial=true;product=arginine decarboxylase;pseudo=true;transl_table=11 NZ_JAATTN010000210.1 RefSeq pseudogene 3152 3258 . - . ID=gene-HGK48_RS11580;Name=HGK48_RS11580;end_range=3258,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11580;partial=true;pseudo=true;start_range=.,3152 NZ_JAATTN010000210.1 Protein Homology CDS 3152 3258 . - 2 ID=cds-HGK48_RS11580;Parent=gene-HGK48_RS11580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344171.1;locus_tag=HGK48_RS11580;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3152;transl_table=11 ##sequence-region NZ_JAATTN010000211.1 1 3164 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000211.1 RefSeq region 1 3164 . + . ID=NZ_JAATTN010000211.1:1..3164;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000211.1 RefSeq gene 1 1700 . - . ID=gene-HGK48_RS08470;Name=HGK48_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08470;partial=true;start_range=.,1 NZ_JAATTN010000211.1 Protein Homology CDS 1 1700 . - 0 ID=cds-WP_168236845.1;Parent=gene-HGK48_RS08470;Dbxref=GenBank:WP_168236845.1;Name=WP_168236845.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731920.1;locus_tag=HGK48_RS08470;partial=true;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_168236845.1;start_range=.,1;transl_table=11 NZ_JAATTN010000211.1 RefSeq gene 1700 1987 . - . ID=gene-HGK48_RS08475;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=HGK48_RS08475 NZ_JAATTN010000211.1 Protein Homology CDS 1700 1987 . - 0 ID=cds-WP_002849118.1;Parent=gene-HGK48_RS08475;Dbxref=GenBank:WP_002849118.1;Name=WP_002849118.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849118.1;locus_tag=HGK48_RS08475;product=flagellar hook-basal body complex protein FliE;protein_id=WP_002849118.1;transl_table=11 NZ_JAATTN010000211.1 RefSeq gene 1991 2485 . - . ID=gene-HGK48_RS08480;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=HGK48_RS08480 NZ_JAATTN010000211.1 Protein Homology CDS 1991 2485 . - 0 ID=cds-WP_002849120.1;Parent=gene-HGK48_RS08480;Dbxref=GenBank:WP_002849120.1;Name=WP_002849120.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343958.1;locus_tag=HGK48_RS08480;product=flagellar basal body rod protein FlgC;protein_id=WP_002849120.1;transl_table=11 NZ_JAATTN010000211.1 RefSeq gene 2495 2935 . - . ID=gene-HGK48_RS08485;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=HGK48_RS08485 NZ_JAATTN010000211.1 Protein Homology CDS 2495 2935 . - 0 ID=cds-WP_011731922.1;Parent=gene-HGK48_RS08485;Dbxref=GenBank:WP_011731922.1;Name=WP_011731922.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946578.1;locus_tag=HGK48_RS08485;product=flagellar basal body rod protein FlgB;protein_id=WP_011731922.1;transl_table=11 NZ_JAATTN010000211.1 RefSeq pseudogene 2981 3164 . - . ID=gene-HGK48_RS08490;Name=HGK48_RS08490;end_range=3164,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08490;partial=true;pseudo=true NZ_JAATTN010000211.1 Protein Homology CDS 2981 3164 . - 1 ID=cds-HGK48_RS08490;Parent=gene-HGK48_RS08490;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3164,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849121.1;locus_tag=HGK48_RS08490;partial=true;product=leucyl/phenylalanyl-tRNA--protein transferase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000212.1 1 3209 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000212.1 RefSeq region 1 3209 . + . ID=NZ_JAATTN010000212.1:1..3209;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000212.1 RefSeq gene 1 988 . - . ID=gene-HGK48_RS08495;Name=HGK48_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08495;partial=true;start_range=.,1 NZ_JAATTN010000212.1 Protein Homology CDS 1 988 . - 0 ID=cds-WP_168236846.1;Parent=gene-HGK48_RS08495;Dbxref=GenBank:WP_168236846.1;Name=WP_168236846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940315.1;locus_tag=HGK48_RS08495;partial=true;product=trypsin-like peptidase domain-containing protein;protein_id=WP_168236846.1;start_range=.,1;transl_table=11 NZ_JAATTN010000212.1 RefSeq gene 1198 2070 . + . ID=gene-HGK48_RS08500;Name=HGK48_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08500 NZ_JAATTN010000212.1 Protein Homology CDS 1198 2070 . + 0 ID=cds-WP_002849197.1;Parent=gene-HGK48_RS08500;Dbxref=GenBank:WP_002849197.1;Name=WP_002849197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849197.1;locus_tag=HGK48_RS08500;product=DnaJ family protein;protein_id=WP_002849197.1;transl_table=11 NZ_JAATTN010000212.1 RefSeq gene 2082 2453 . + . ID=gene-HGK48_RS08505;Name=HGK48_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08505 NZ_JAATTN010000212.1 Protein Homology CDS 2082 2453 . + 0 ID=cds-WP_002849199.1;Parent=gene-HGK48_RS08505;Dbxref=GenBank:WP_002849199.1;Name=WP_002849199.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849199.1;locus_tag=HGK48_RS08505;product=heat shock protein transcriptional repressor HspR;protein_id=WP_002849199.1;transl_table=11 NZ_JAATTN010000212.1 RefSeq pseudogene 2459 3040 . + . ID=gene-HGK48_RS08510;Name=HGK48_RS08510;end_range=3040,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08510;partial=true;pseudo=true NZ_JAATTN010000212.1 Protein Homology CDS 2459 3040 . + 0 ID=cds-HGK48_RS08510;Parent=gene-HGK48_RS08510;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;end_range=3040,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731946.1;locus_tag=HGK48_RS08510;partial=true;product=cation:proton antiporter domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000213.1 1 3110 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000213.1 RefSeq region 1 3110 . + . ID=NZ_JAATTN010000213.1:1..3110;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000213.1 RefSeq gene 1 1185 . + . ID=gene-HGK48_RS08515;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=HGK48_RS08515;partial=true;start_range=.,1 NZ_JAATTN010000213.1 Protein Homology CDS 1 1185 . + 0 ID=cds-WP_168236847.1;Parent=gene-HGK48_RS08515;Dbxref=GenBank:WP_168236847.1;Name=WP_168236847.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009494753.1;locus_tag=HGK48_RS08515;partial=true;product=chromosomal replication initiator protein DnaA;protein_id=WP_168236847.1;start_range=.,1;transl_table=11 NZ_JAATTN010000213.1 RefSeq gene 1323 2393 . + . ID=gene-HGK48_RS08520;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=HGK48_RS08520 NZ_JAATTN010000213.1 Protein Homology CDS 1323 2393 . + 0 ID=cds-WP_002847901.1;Parent=gene-HGK48_RS08520;Dbxref=GenBank:WP_002847901.1;Name=WP_002847901.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009494751.1;locus_tag=HGK48_RS08520;product=DNA polymerase III subunit beta;protein_id=WP_002847901.1;transl_table=11 NZ_JAATTN010000213.1 RefSeq gene 2402 3110 . + . ID=gene-HGK48_RS08525;Name=HGK48_RS08525;end_range=3110,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08525;partial=true NZ_JAATTN010000213.1 Protein Homology CDS 2402 3110 . + 0 ID=cds-WP_240944836.1;Parent=gene-HGK48_RS08525;Dbxref=GenBank:WP_240944836.1;Name=WP_240944836.1;end_range=3110,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847902.1;locus_tag=HGK48_RS08525;partial=true;product=ATP-binding protein;protein_id=WP_240944836.1;transl_table=11 ##sequence-region NZ_JAATTN010000214.1 1 3105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000214.1 RefSeq region 1 3105 . + . ID=NZ_JAATTN010000214.1:1..3105;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000214.1 RefSeq gene 1 680 . - . ID=gene-HGK48_RS08530;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=HGK48_RS08530;partial=true;start_range=.,1 NZ_JAATTN010000214.1 Protein Homology CDS 1 680 . - 0 ID=cds-WP_168236848.1;Parent=gene-HGK48_RS08530;Dbxref=GenBank:WP_168236848.1;Name=WP_168236848.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: protein motif:HMM:TIGR02432.1;locus_tag=HGK48_RS08530;partial=true;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_168236848.1;start_range=.,1;transl_table=11 NZ_JAATTN010000214.1 RefSeq gene 668 1978 . - . ID=gene-HGK48_RS08535;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=HGK48_RS08535 NZ_JAATTN010000214.1 Protein Homology CDS 668 1978 . - 0 ID=cds-WP_002850202.1;Parent=gene-HGK48_RS08535;Dbxref=GenBank:WP_002850202.1;Name=WP_002850202.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850202.1;locus_tag=HGK48_RS08535;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_002850202.1;transl_table=11 NZ_JAATTN010000214.1 RefSeq gene 1980 2801 . - . ID=gene-HGK48_RS08540;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=HGK48_RS08540 NZ_JAATTN010000214.1 Protein Homology CDS 1980 2801 . - 0 ID=cds-WP_002850200.1;Parent=gene-HGK48_RS08540;Dbxref=GenBank:WP_002850200.1;Name=WP_002850200.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850200.1;locus_tag=HGK48_RS08540;product=pantoate--beta-alanine ligase;protein_id=WP_002850200.1;transl_table=11 NZ_JAATTN010000214.1 RefSeq pseudogene 2973 3105 . + . ID=gene-HGK48_RS08545;Name=prfB;end_range=3105,.;gbkey=Gene;gene=prfB;gene_biotype=pseudogene;locus_tag=HGK48_RS08545;partial=true;pseudo=true NZ_JAATTN010000214.1 Protein Homology CDS 2973 3105 . + 0 ID=cds-HGK48_RS08545;Parent=gene-HGK48_RS08545;Note=recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2%3B in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism%3B this protein is similar to release factor 1%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3105,.;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850199.1;locus_tag=HGK48_RS08545;partial=true;product=peptide chain release factor 2;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000215.1 1 3097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000215.1 RefSeq region 1 3097 . + . ID=NZ_JAATTN010000215.1:1..3097;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000215.1 RefSeq gene 1 1410 . - . ID=gene-HGK48_RS08550;Name=HGK48_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08550;partial=true;start_range=.,1 NZ_JAATTN010000215.1 Protein Homology CDS 1 1410 . - 0 ID=cds-WP_168236849.1;Parent=gene-HGK48_RS08550;Dbxref=GenBank:WP_168236849.1;Name=WP_168236849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731715.1;locus_tag=HGK48_RS08550;partial=true;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_168236849.1;start_range=.,1;transl_table=11 NZ_JAATTN010000215.1 RefSeq gene 1570 2538 . + . ID=gene-HGK48_RS08555;Name=HGK48_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08555 NZ_JAATTN010000215.1 Protein Homology CDS 1570 2538 . + 0 ID=cds-WP_002848139.1;Parent=gene-HGK48_RS08555;Dbxref=GenBank:WP_002848139.1;Name=WP_002848139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848139.1;locus_tag=HGK48_RS08555;product=putative transporter;protein_id=WP_002848139.1;transl_table=11 NZ_JAATTN010000215.1 RefSeq gene 2546 3097 . + . ID=gene-HGK48_RS08560;Name=HGK48_RS08560;end_range=3097,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08560;partial=true NZ_JAATTN010000215.1 Protein Homology CDS 2546 3097 . + 0 ID=cds-WP_168236850.1;Parent=gene-HGK48_RS08560;Dbxref=GenBank:WP_168236850.1;Name=WP_168236850.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;end_range=3097,.;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731716.1;locus_tag=HGK48_RS08560;partial=true;product=M48 family metallopeptidase;protein_id=WP_168236850.1;transl_table=11 ##sequence-region NZ_JAATTN010000216.1 1 3083 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000216.1 RefSeq region 1 3083 . + . ID=NZ_JAATTN010000216.1:1..3083;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000216.1 RefSeq gene 1 804 . + . ID=gene-HGK48_RS08565;Name=pglE;gbkey=Gene;gene=pglE;gene_biotype=protein_coding;locus_tag=HGK48_RS08565;partial=true;start_range=.,1 NZ_JAATTN010000216.1 Protein Homology CDS 1 804 . + 0 ID=cds-WP_168236851.1;Parent=gene-HGK48_RS08565;Dbxref=GenBank:WP_168236851.1;Name=WP_168236851.1;gbkey=CDS;gene=pglE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_065843131.1;locus_tag=HGK48_RS08565;partial=true;product=UDP-N-acetylbacillosamine transaminase;protein_id=WP_168236851.1;start_range=.,1;transl_table=11 NZ_JAATTN010000216.1 RefSeq gene 801 2588 . + . ID=gene-HGK48_RS08570;Name=pglF;gbkey=Gene;gene=pglF;gene_biotype=protein_coding;locus_tag=HGK48_RS08570 NZ_JAATTN010000216.1 Protein Homology CDS 801 2588 . + 0 ID=cds-WP_002850177.1;Parent=gene-HGK48_RS08570;Dbxref=GenBank:WP_002850177.1;Name=WP_002850177.1;gbkey=CDS;gene=pglF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_081867149.1;locus_tag=HGK48_RS08570;product=UDP-N-acetylglucosamine 4%2C6-dehydratase (configuration-retaining);protein_id=WP_002850177.1;transl_table=11 NZ_JAATTN010000216.1 RefSeq gene 2590 3083 . + . ID=gene-HGK48_RS08575;Name=HGK48_RS08575;end_range=3083,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08575;partial=true NZ_JAATTN010000216.1 Protein Homology CDS 2590 3083 . + 0 ID=cds-WP_394352683.1;Parent=gene-HGK48_RS08575;Dbxref=GenBank:WP_394352683.1;Name=WP_394352683.1;Ontology_term=GO:0007165;end_range=3083,.;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850175.1;locus_tag=HGK48_RS08575;partial=true;product=PDC sensor domain-containing protein;protein_id=WP_394352683.1;transl_table=11 ##sequence-region NZ_JAATTN010000217.1 1 3045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000217.1 RefSeq region 1 3045 . + . ID=NZ_JAATTN010000217.1:1..3045;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000217.1 RefSeq gene 1 685 . - . ID=gene-HGK48_RS08580;Name=HGK48_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08580;partial=true;start_range=.,1 NZ_JAATTN010000217.1 Protein Homology CDS 1 685 . - 0 ID=cds-WP_206120318.1;Parent=gene-HGK48_RS08580;Dbxref=GenBank:WP_206120318.1;Name=WP_206120318.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024314.6;locus_tag=HGK48_RS08580;partial=true;product=SH3 domain-containing protein;protein_id=WP_206120318.1;start_range=.,1;transl_table=11 NZ_JAATTN010000217.1 RefSeq gene 743 2050 . + . ID=gene-HGK48_RS08585;Name=HGK48_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08585 NZ_JAATTN010000217.1 Protein Homology CDS 743 2050 . + 0 ID=cds-WP_002848968.1;Parent=gene-HGK48_RS08585;Dbxref=GenBank:WP_002848968.1;Name=WP_002848968.1;Ontology_term=GO:0032508,GO:0003677,GO:0003678,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;go_process=obsolete DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848968.1;locus_tag=HGK48_RS08585;product=ATP-dependent DNA helicase;protein_id=WP_002848968.1;transl_table=11 NZ_JAATTN010000217.1 RefSeq gene 2047 2517 . + . ID=gene-HGK48_RS08590;Name=HGK48_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08590 NZ_JAATTN010000217.1 GeneMarkS-2+ CDS 2047 2517 . + 0 ID=cds-WP_002848970.1;Parent=gene-HGK48_RS08590;Dbxref=GenBank:WP_002848970.1;Name=WP_002848970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08590;product=hypothetical protein;protein_id=WP_002848970.1;transl_table=11 NZ_JAATTN010000217.1 RefSeq gene 2563 3045 . - . ID=gene-HGK48_RS08595;Name=lolA;end_range=3045,.;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=HGK48_RS08595;partial=true NZ_JAATTN010000217.1 Protein Homology CDS 2563 3045 . - 0 ID=cds-WP_206120319.1;Parent=gene-HGK48_RS08595;Dbxref=GenBank:WP_206120319.1;Name=WP_206120319.1;end_range=3045,.;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005870579.1;locus_tag=HGK48_RS08595;partial=true;product=LolA-like outer membrane lipoprotein chaperone;protein_id=WP_206120319.1;transl_table=11 ##sequence-region NZ_JAATTN010000218.1 1 3015 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000218.1 RefSeq region 1 3015 . + . ID=NZ_JAATTN010000218.1:1..3015;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000218.1 RefSeq pseudogene 1 541 . + . ID=gene-HGK48_RS08600;Name=HGK48_RS08600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08600;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000218.1 GeneMarkS-2+ CDS 1 541 . + 1 ID=cds-HGK48_RS08600;Parent=gene-HGK48_RS08600;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08600;partial=true;product=HD domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000218.1 RefSeq gene 552 2369 . + . ID=gene-HGK48_RS08605;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=HGK48_RS08605 NZ_JAATTN010000218.1 Protein Homology CDS 552 2369 . + 0 ID=cds-WP_002848996.1;Parent=gene-HGK48_RS08605;Dbxref=GenBank:WP_002848996.1;Name=WP_002848996.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009650468.1;locus_tag=HGK48_RS08605;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_002848996.1;transl_table=11 NZ_JAATTN010000218.1 RefSeq pseudogene 2507 2926 . + . ID=gene-HGK48_RS08610;Name=HGK48_RS08610;end_range=2926,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08610;partial=true;pseudo=true NZ_JAATTN010000218.1 Protein Homology CDS 2507 2926 . + 0 ID=cds-HGK48_RS08610;Parent=gene-HGK48_RS08610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010403526.1;locus_tag=HGK48_RS08610;partial=true;product=YeeE/YedE thiosulfate transporter family protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000219.1 1 3008 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000219.1 RefSeq region 1 3008 . + . ID=NZ_JAATTN010000219.1:1..3008;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000219.1 RefSeq gene 1 1211 . + . ID=gene-HGK48_RS08615;Name=HGK48_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08615;partial=true;start_range=.,1 NZ_JAATTN010000219.1 Protein Homology CDS 1 1211 . + 2 ID=cds-WP_168236853.1;Parent=gene-HGK48_RS08615;Dbxref=GenBank:WP_168236853.1;Name=WP_168236853.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848129.1;locus_tag=HGK48_RS08615;partial=true;product=flavocytochrome c;protein_id=WP_168236853.1;start_range=.,1;transl_table=11 NZ_JAATTN010000219.1 RefSeq gene 1205 1597 . + . ID=gene-HGK48_RS08620;Name=HGK48_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08620 NZ_JAATTN010000219.1 Protein Homology CDS 1205 1597 . + 0 ID=cds-WP_002848131.1;Parent=gene-HGK48_RS08620;Dbxref=GenBank:WP_002848131.1;Name=WP_002848131.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848131.1;locus_tag=HGK48_RS08620;product=cytochrome c3 family protein;protein_id=WP_002848131.1;transl_table=11 NZ_JAATTN010000219.1 RefSeq gene 1607 2179 . + . ID=gene-HGK48_RS08625;Name=HGK48_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08625 NZ_JAATTN010000219.1 Protein Homology CDS 1607 2179 . + 0 ID=cds-WP_002848132.1;Parent=gene-HGK48_RS08625;Dbxref=GenBank:WP_002848132.1;Name=WP_002848132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731711.1;locus_tag=HGK48_RS08625;product=cytochrome c3 family protein;protein_id=WP_002848132.1;transl_table=11 NZ_JAATTN010000219.1 RefSeq gene 2188 2880 . + . ID=gene-HGK48_RS08630;Name=HGK48_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08630 NZ_JAATTN010000219.1 Protein Homology CDS 2188 2880 . + 0 ID=cds-WP_231854847.1;Parent=gene-HGK48_RS08630;Dbxref=GenBank:WP_231854847.1;Name=WP_231854847.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014763.6;locus_tag=HGK48_RS08630;product=cache domain-containing protein;protein_id=WP_231854847.1;transl_table=11 ##sequence-region NZ_JAATTN010000021.1 1 13329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000021.1 RefSeq region 1 13329 . + . ID=NZ_JAATTN010000021.1:1..13329;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000021.1 RefSeq pseudogene 1 204 . - . ID=gene-HGK48_RS02080;Name=HGK48_RS02080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS02080;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000021.1 Protein Homology CDS 1 204 . - 0 ID=cds-HGK48_RS02080;Parent=gene-HGK48_RS02080;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850503.1;locus_tag=HGK48_RS02080;partial=true;product=aminofutalosine deaminase family hydrolase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 305 772 . + . ID=gene-HGK48_RS02085;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=HGK48_RS02085 NZ_JAATTN010000021.1 Protein Homology CDS 305 772 . + 0 ID=cds-WP_161780550.1;Parent=gene-HGK48_RS02085;Dbxref=GenBank:WP_161780550.1;Name=WP_161780550.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012660977.1;locus_tag=HGK48_RS02085;product=type II 3-dehydroquinate dehydratase;protein_id=WP_161780550.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 765 1787 . + . ID=gene-HGK48_RS02090;Name=HGK48_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02090 NZ_JAATTN010000021.1 Protein Homology CDS 765 1787 . + 0 ID=cds-WP_002850507.1;Parent=gene-HGK48_RS02090;Dbxref=GenBank:WP_002850507.1;Name=WP_002850507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850507.1;locus_tag=HGK48_RS02090;product=M24 family metallopeptidase;protein_id=WP_002850507.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 1791 2282 . + . ID=gene-HGK48_RS02095;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=HGK48_RS02095 NZ_JAATTN010000021.1 Protein Homology CDS 1791 2282 . + 0 ID=cds-WP_002850509.1;Parent=gene-HGK48_RS02095;Dbxref=GenBank:WP_002850509.1;Name=WP_002850509.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850509.1;locus_tag=HGK48_RS02095;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_002850509.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 2282 3589 . + . ID=gene-HGK48_RS02100;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=HGK48_RS02100 NZ_JAATTN010000021.1 Protein Homology CDS 2282 3589 . + 0 ID=cds-WP_010400968.1;Parent=gene-HGK48_RS02100;Dbxref=GenBank:WP_010400968.1;Name=WP_010400968.1;Ontology_term=GO:0044781,GO:0003924,GO:0005525;gbkey=CDS;gene=flhF;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010400968.1;locus_tag=HGK48_RS02100;product=flagellar biosynthesis protein FlhF;protein_id=WP_010400968.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 3573 4436 . + . ID=gene-HGK48_RS02105;Name=HGK48_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02105 NZ_JAATTN010000021.1 Protein Homology CDS 3573 4436 . + 0 ID=cds-WP_011732233.1;Parent=gene-HGK48_RS02105;Dbxref=GenBank:WP_011732233.1;Name=WP_011732233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008351081.1;locus_tag=HGK48_RS02105;product=P-loop NTPase;protein_id=WP_011732233.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 4450 4800 . + . ID=gene-HGK48_RS02110;Name=HGK48_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02110 NZ_JAATTN010000021.1 Protein Homology CDS 4450 4800 . + 0 ID=cds-WP_002850511.1;Parent=gene-HGK48_RS02110;Dbxref=GenBank:WP_002850511.1;Name=WP_002850511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850511.1;locus_tag=HGK48_RS02110;product=membrane protein;protein_id=WP_002850511.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 4772 5476 . + . ID=gene-HGK48_RS02115;Name=HGK48_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02115 NZ_JAATTN010000021.1 Protein Homology CDS 4772 5476 . + 0 ID=cds-WP_002850513.1;Parent=gene-HGK48_RS02115;Dbxref=GenBank:WP_002850513.1;Name=WP_002850513.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850513.1;locus_tag=HGK48_RS02115;product=RNA polymerase sigma factor FliA;protein_id=WP_002850513.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 5476 6567 . + . ID=gene-HGK48_RS02120;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=HGK48_RS02120 NZ_JAATTN010000021.1 Protein Homology CDS 5476 6567 . + 0 ID=cds-WP_002850515.1;Parent=gene-HGK48_RS02120;Dbxref=GenBank:WP_002850515.1;Name=WP_002850515.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009649303.1;locus_tag=HGK48_RS02120;product=flagellar motor switch protein FliM;protein_id=WP_002850515.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 6560 7390 . + . ID=gene-HGK48_RS02125;Name=fliY;gbkey=Gene;gene=fliY;gene_biotype=protein_coding;locus_tag=HGK48_RS02125 NZ_JAATTN010000021.1 Protein Homology CDS 6560 7390 . + 0 ID=cds-WP_002850517.1;Parent=gene-HGK48_RS02125;Dbxref=GenBank:WP_002850517.1;Name=WP_002850517.1;Ontology_term=GO:0071973,GO:0003774,GO:0009425;gbkey=CDS;gene=fliY;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850517.1;locus_tag=HGK48_RS02125;product=flagellar motor switch protein FliY;protein_id=WP_002850517.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 7463 8215 . - . ID=gene-HGK48_RS02130;Name=HGK48_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02130 NZ_JAATTN010000021.1 Protein Homology CDS 7463 8215 . - 0 ID=cds-WP_002850519.1;Parent=gene-HGK48_RS02130;Dbxref=GenBank:WP_002850519.1;Name=WP_002850519.1;Ontology_term=GO:0006400,GO:0005524,GO:0032267;gbkey=CDS;go_function=ATP binding|0005524||IEA,tRNA(Ile)-lysidine synthase activity|0032267||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850519.1;locus_tag=HGK48_RS02130;product=tRNA lysidine(34) synthetase;protein_id=WP_002850519.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 8212 8898 . - . ID=gene-HGK48_RS02135;Name=HGK48_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02135 NZ_JAATTN010000021.1 Protein Homology CDS 8212 8898 . - 0 ID=cds-WP_002850521.1;Parent=gene-HGK48_RS02135;Dbxref=GenBank:WP_002850521.1;Name=WP_002850521.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002922859.1;locus_tag=HGK48_RS02135;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_002850521.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 8895 9812 . - . ID=gene-HGK48_RS02140;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=HGK48_RS02140 NZ_JAATTN010000021.1 Protein Homology CDS 8895 9812 . - 0 ID=cds-WP_002850523.1;Parent=gene-HGK48_RS02140;Dbxref=GenBank:WP_002850523.1;Name=WP_002850523.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850523.1;locus_tag=HGK48_RS02140;product=ACP S-malonyltransferase;protein_id=WP_002850523.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 9821 10393 . - . ID=gene-HGK48_RS02145;Name=HGK48_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02145 NZ_JAATTN010000021.1 Protein Homology CDS 9821 10393 . - 0 ID=cds-WP_002850525.1;Parent=gene-HGK48_RS02145;Dbxref=GenBank:WP_002850525.1;Name=WP_002850525.1;Ontology_term=GO:0006457,GO:0003755,GO:0046872;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,metal ion binding|0046872||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850525.1;locus_tag=HGK48_RS02145;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002850525.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 10414 11295 . - . ID=gene-HGK48_RS02150;Name=HGK48_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02150 NZ_JAATTN010000021.1 Protein Homology CDS 10414 11295 . - 0 ID=cds-WP_002850527.1;Parent=gene-HGK48_RS02150;Dbxref=GenBank:WP_002850527.1;Name=WP_002850527.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009649300.1;locus_tag=HGK48_RS02150;product=tetratricopeptide repeat protein;protein_id=WP_002850527.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 11299 11820 . - . ID=gene-HGK48_RS02155;Name=HGK48_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02155 NZ_JAATTN010000021.1 Protein Homology CDS 11299 11820 . - 0 ID=cds-WP_002850529.1;Parent=gene-HGK48_RS02155;Dbxref=GenBank:WP_002850529.1;Name=WP_002850529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939415.1;locus_tag=HGK48_RS02155;product=OmpA family protein;protein_id=WP_002850529.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 11907 13172 . - . ID=gene-HGK48_RS02160;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=HGK48_RS02160 NZ_JAATTN010000021.1 Protein Homology CDS 11907 13172 . - 0 ID=cds-WP_002850531.1;Parent=gene-HGK48_RS02160;Dbxref=GenBank:WP_002850531.1;Name=WP_002850531.1;gbkey=CDS;gene=tolB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516670.1;locus_tag=HGK48_RS02160;product=Tol-Pal system protein TolB;protein_id=WP_002850531.1;transl_table=11 NZ_JAATTN010000021.1 RefSeq gene 13169 13312 . - . ID=gene-HGK48_RS11505;Name=HGK48_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11505 NZ_JAATTN010000021.1 Protein Homology CDS 13169 13312 . - 0 ID=cds-WP_394352675.1;Parent=gene-HGK48_RS11505;Dbxref=GenBank:WP_394352675.1;Name=WP_394352675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024503.6;locus_tag=HGK48_RS11505;product=hypothetical protein;protein_id=WP_394352675.1;transl_table=11 ##sequence-region NZ_JAATTN010000220.1 1 2997 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000220.1 RefSeq region 1 2997 . + . ID=NZ_JAATTN010000220.1:1..2997;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000220.1 RefSeq gene 1 648 . - . ID=gene-HGK48_RS08635;Name=HGK48_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08635;partial=true;start_range=.,1 NZ_JAATTN010000220.1 Protein Homology CDS 1 648 . - 0 ID=cds-WP_168236854.1;Parent=gene-HGK48_RS08635;Dbxref=GenBank:WP_168236854.1;Name=WP_168236854.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732041.1;locus_tag=HGK48_RS08635;partial=true;product=ATP-binding protein;protein_id=WP_168236854.1;start_range=.,1;transl_table=11 NZ_JAATTN010000220.1 RefSeq pseudogene 645 2182 . - . ID=gene-HGK48_RS08640;Name=mshL;gbkey=Gene;gene=mshL;gene_biotype=pseudogene;locus_tag=HGK48_RS08640;pseudo=true NZ_JAATTN010000220.1 Protein Homology CDS 645 2182 . - 0 ID=cds-HGK48_RS08640;Parent=gene-HGK48_RS08640;Note=frameshifted;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=mshL;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849561.1;locus_tag=HGK48_RS08640;product=pilus (MSHA type) biogenesis protein MshL;pseudo=true;transl_table=11 NZ_JAATTN010000220.1 RefSeq gene 2160 2558 . - . ID=gene-HGK48_RS08645;Name=HGK48_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08645 NZ_JAATTN010000220.1 GeneMarkS-2+ CDS 2160 2558 . - 0 ID=cds-WP_011732040.1;Parent=gene-HGK48_RS08645;Dbxref=GenBank:WP_011732040.1;Name=WP_011732040.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08645;product=hypothetical protein;protein_id=WP_011732040.1;transl_table=11 NZ_JAATTN010000220.1 RefSeq pseudogene 2555 2997 . - . ID=gene-HGK48_RS08650;Name=HGK48_RS08650;end_range=2997,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08650;partial=true;pseudo=true NZ_JAATTN010000220.1 GeneMarkS-2+ CDS 2555 2997 . - 2 ID=cds-HGK48_RS08650;Parent=gene-HGK48_RS08650;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2997,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08650;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000221.1 1 2961 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000221.1 RefSeq region 1 2961 . + . ID=NZ_JAATTN010000221.1:1..2961;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000221.1 RefSeq gene 1 582 . - . ID=gene-HGK48_RS08655;Name=HGK48_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08655;partial=true;start_range=.,1 NZ_JAATTN010000221.1 Protein Homology CDS 1 582 . - 0 ID=cds-WP_168236855.1;Parent=gene-HGK48_RS08655;Dbxref=GenBank:WP_168236855.1;Name=WP_168236855.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849268.1;locus_tag=HGK48_RS08655;partial=true;product=flagellar basal body L-ring protein FlgH;protein_id=WP_168236855.1;start_range=.,1;transl_table=11 NZ_JAATTN010000221.1 RefSeq gene 658 2052 . + . ID=gene-HGK48_RS08660;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=HGK48_RS08660 NZ_JAATTN010000221.1 Protein Homology CDS 658 2052 . + 0 ID=cds-WP_002849267.1;Parent=gene-HGK48_RS08660;Dbxref=GenBank:WP_002849267.1;Name=WP_002849267.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849267.1;locus_tag=HGK48_RS08660;product=phosphate acetyltransferase;protein_id=WP_002849267.1;transl_table=11 NZ_JAATTN010000221.1 RefSeq pseudogene 2053 2856 . + . ID=gene-HGK48_RS08665;Name=HGK48_RS08665;end_range=2856,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08665;partial=true;pseudo=true NZ_JAATTN010000221.1 Protein Homology CDS 2053 2856 . + 0 ID=cds-HGK48_RS08665;Parent=gene-HGK48_RS08665;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006082,GO:0016301,GO:0016774;end_range=2856,.;gbkey=CDS;go_function=kinase activity|0016301||IEA,phosphotransferase activity%2C carboxyl group as acceptor|0016774||IEA;go_process=organic acid metabolic process|0006082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849266.1;locus_tag=HGK48_RS08665;partial=true;product=acetate/propionate family kinase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000222.1 1 2946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000222.1 RefSeq region 1 2946 . + . ID=NZ_JAATTN010000222.1:1..2946;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000222.1 RefSeq gene 40 1344 . - . ID=gene-HGK48_RS08670;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=HGK48_RS08670 NZ_JAATTN010000222.1 Protein Homology CDS 40 1344 . - 0 ID=cds-WP_024305202.1;Parent=gene-HGK48_RS08670;Dbxref=GenBank:WP_024305202.1;Name=WP_024305202.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732097.1;locus_tag=HGK48_RS08670;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_024305202.1;transl_table=11 NZ_JAATTN010000222.1 RefSeq gene 1353 1964 . - . ID=gene-HGK48_RS08675;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=HGK48_RS08675 NZ_JAATTN010000222.1 Protein Homology CDS 1353 1964 . - 0 ID=cds-WP_010400265.1;Parent=gene-HGK48_RS08675;Dbxref=GenBank:WP_010400265.1;Name=WP_010400265.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010400265.1;locus_tag=HGK48_RS08675;product=ATP phosphoribosyltransferase;protein_id=WP_010400265.1;transl_table=11 NZ_JAATTN010000222.1 RefSeq gene 1952 2584 . - . ID=gene-HGK48_RS08680;Name=HGK48_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08680 NZ_JAATTN010000222.1 Protein Homology CDS 1952 2584 . - 0 ID=cds-WP_002849782.1;Parent=gene-HGK48_RS08680;Dbxref=GenBank:WP_002849782.1;Name=WP_002849782.1;Ontology_term=GO:0004594;gbkey=CDS;go_function=pantothenate kinase activity|0004594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849782.1;locus_tag=HGK48_RS08680;product=type III pantothenate kinase;protein_id=WP_002849782.1;transl_table=11 NZ_JAATTN010000222.1 RefSeq gene 2571 2897 . - . ID=gene-HGK48_RS08685;Name=HGK48_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08685 NZ_JAATTN010000222.1 GeneMarkS-2+ CDS 2571 2897 . - 0 ID=cds-WP_002849781.1;Parent=gene-HGK48_RS08685;Dbxref=GenBank:WP_002849781.1;Name=WP_002849781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08685;product=hypothetical protein;protein_id=WP_002849781.1;transl_table=11 ##sequence-region NZ_JAATTN010000223.1 1 2849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000223.1 RefSeq region 1 2849 . + . ID=NZ_JAATTN010000223.1:1..2849;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000223.1 RefSeq gene 1 347 . - . ID=gene-HGK48_RS08690;Name=HGK48_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08690;partial=true;start_range=.,1 NZ_JAATTN010000223.1 Protein Homology CDS 1 347 . - 0 ID=cds-WP_168236856.1;Parent=gene-HGK48_RS08690;Dbxref=GenBank:WP_168236856.1;Name=WP_168236856.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002953154.1;locus_tag=HGK48_RS08690;partial=true;product=Dps family protein;protein_id=WP_168236856.1;start_range=.,1;transl_table=11 NZ_JAATTN010000223.1 RefSeq gene 552 1757 . - . ID=gene-HGK48_RS08695;Name=HGK48_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08695 NZ_JAATTN010000223.1 Protein Homology CDS 552 1757 . - 0 ID=cds-WP_024305268.1;Parent=gene-HGK48_RS08695;Dbxref=GenBank:WP_024305268.1;Name=WP_024305268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731690.1;locus_tag=HGK48_RS08695;product=glucose-6-phosphate isomerase;protein_id=WP_024305268.1;transl_table=11 NZ_JAATTN010000223.1 RefSeq gene 1744 2574 . - . ID=gene-HGK48_RS08700;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=HGK48_RS08700 NZ_JAATTN010000223.1 Protein Homology CDS 1744 2574 . - 0 ID=cds-WP_002848061.1;Parent=gene-HGK48_RS08700;Dbxref=GenBank:WP_002848061.1;Name=WP_002848061.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011992568.1;locus_tag=HGK48_RS08700;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_002848061.1;transl_table=11 NZ_JAATTN010000223.1 RefSeq gene 2650 2849 . + . ID=gene-HGK48_RS08705;Name=HGK48_RS08705;end_range=2849,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08705;partial=true NZ_JAATTN010000223.1 Protein Homology CDS 2650 2849 . + 0 ID=cds-WP_168236857.1;Parent=gene-HGK48_RS08705;Dbxref=GenBank:WP_168236857.1;Name=WP_168236857.1;end_range=2849,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848059.1;locus_tag=HGK48_RS08705;partial=true;product=YigZ family protein;protein_id=WP_168236857.1;transl_table=11 ##sequence-region NZ_JAATTN010000224.1 1 2909 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000224.1 RefSeq region 1 2909 . + . ID=NZ_JAATTN010000224.1:1..2909;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000224.1 RefSeq gene 132 1316 . + . ID=gene-HGK48_RS08710;Name=HGK48_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08710 NZ_JAATTN010000224.1 Protein Homology CDS 132 1316 . + 0 ID=cds-WP_024305229.1;Parent=gene-HGK48_RS08710;Dbxref=GenBank:WP_024305229.1;Name=WP_024305229.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849324.1;locus_tag=HGK48_RS08710;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_024305229.1;transl_table=11 NZ_JAATTN010000224.1 RefSeq gene 1313 2320 . + . ID=gene-HGK48_RS08715;Name=HGK48_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08715 NZ_JAATTN010000224.1 Protein Homology CDS 1313 2320 . + 0 ID=cds-WP_002849334.1;Parent=gene-HGK48_RS08715;Dbxref=GenBank:WP_002849334.1;Name=WP_002849334.1;Ontology_term=GO:0005975,GO:0007049,GO:0008360,GO:0009252,GO:0030259,GO:0051301,GO:0071555,GO:0050511,GO:0051991,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA,UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2%2C6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity|0051991||IEA;go_process=carbohydrate metabolic process|0005975||IEA,cell cycle|0007049||IEA,regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,obsolete lipid glycosylation|0030259||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849334.1;locus_tag=HGK48_RS08715;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=WP_002849334.1;transl_table=11 NZ_JAATTN010000224.1 RefSeq gene 2487 2801 . + . ID=gene-HGK48_RS08720;Name=HGK48_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08720 NZ_JAATTN010000224.1 Protein Homology CDS 2487 2801 . + 0 ID=cds-WP_002849336.1;Parent=gene-HGK48_RS08720;Dbxref=GenBank:WP_002849336.1;Name=WP_002849336.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004277457.1;locus_tag=HGK48_RS08720;product=HU family DNA-binding protein;protein_id=WP_002849336.1;transl_table=11 ##sequence-region NZ_JAATTN010000225.1 1 2855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000225.1 RefSeq region 1 2855 . + . ID=NZ_JAATTN010000225.1:1..2855;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000225.1 RefSeq pseudogene 1 204 . + . ID=gene-HGK48_RS08725;Name=HGK48_RS08725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08725;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000225.1 GeneMarkS-2+ CDS 1 204 . + 0 ID=cds-HGK48_RS08725;Parent=gene-HGK48_RS08725;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08725;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000225.1 RefSeq gene 214 1422 . + . ID=gene-HGK48_RS08730;Name=HGK48_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08730 NZ_JAATTN010000225.1 Protein Homology CDS 214 1422 . + 0 ID=cds-WP_002848395.1;Parent=gene-HGK48_RS08730;Dbxref=GenBank:WP_002848395.1;Name=WP_002848395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012001056.1;locus_tag=HGK48_RS08730;product=LL-diaminopimelate aminotransferase;protein_id=WP_002848395.1;transl_table=11 NZ_JAATTN010000225.1 RefSeq gene 1419 2687 . + . ID=gene-HGK48_RS08735;Name=HGK48_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08735 NZ_JAATTN010000225.1 Protein Homology CDS 1419 2687 . + 0 ID=cds-WP_011731766.1;Parent=gene-HGK48_RS08735;Dbxref=GenBank:WP_011731766.1;Name=WP_011731766.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002785474.1;locus_tag=HGK48_RS08735;product=homoserine dehydrogenase;protein_id=WP_011731766.1;transl_table=11 NZ_JAATTN010000225.1 RefSeq gene 2689 2855 . + . ID=gene-HGK48_RS08740;Name=HGK48_RS08740;end_range=2855,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08740;partial=true NZ_JAATTN010000225.1 Protein Homology CDS 2689 2855 . + 0 ID=cds-WP_168236858.1;Parent=gene-HGK48_RS08740;Dbxref=GenBank:WP_168236858.1;Name=WP_168236858.1;Ontology_term=GO:0003677,GO:0004519;end_range=2855,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848396.1;locus_tag=HGK48_RS08740;partial=true;product=YraN family protein;protein_id=WP_168236858.1;transl_table=11 ##sequence-region NZ_JAATTN010000226.1 1 2855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000226.1 RefSeq region 1 2855 . + . ID=NZ_JAATTN010000226.1:1..2855;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000226.1 RefSeq gene 352 426 . - . ID=gene-HGK48_RS08750;Name=HGK48_RS08750;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS08750 NZ_JAATTN010000226.1 tRNAscan-SE tRNA 352 426 . - . ID=rna-HGK48_RS08750;Parent=gene-HGK48_RS08750;anticodon=(pos:complement(392..394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS08750;product=tRNA-Gly NZ_JAATTN010000226.1 tRNAscan-SE exon 352 426 . - . ID=exon-HGK48_RS08750-1;Parent=rna-HGK48_RS08750;anticodon=(pos:complement(392..394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS08750;product=tRNA-Gly NZ_JAATTN010000226.1 RefSeq gene 473 1651 . - . ID=gene-HGK48_RS08755;Name=HGK48_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08755 NZ_JAATTN010000226.1 Protein Homology CDS 473 1651 . - 0 ID=cds-WP_002849398.1;Parent=gene-HGK48_RS08755;Dbxref=GenBank:WP_002849398.1;Name=WP_002849398.1;Ontology_term=GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004274722.1;locus_tag=HGK48_RS08755;product=molybdopterin molybdotransferase MoeA;protein_id=WP_002849398.1;transl_table=11 NZ_JAATTN010000226.1 RefSeq pseudogene 1663 2781 . - . ID=gene-HGK48_RS08760;Name=murA;end_range=2781,.;gbkey=Gene;gene=murA;gene_biotype=pseudogene;locus_tag=HGK48_RS08760;partial=true;pseudo=true NZ_JAATTN010000226.1 Protein Homology CDS 1663 2781 . - 0 ID=cds-HGK48_RS08760;Parent=gene-HGK48_RS08760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0019277,GO:0008760;end_range=2781,.;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002870028.1;locus_tag=HGK48_RS08760;partial=true;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000227.1 1 2833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000227.1 RefSeq region 1 2833 . + . ID=NZ_JAATTN010000227.1:1..2833;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000227.1 RefSeq gene 208 621 . - . ID=gene-HGK48_RS08765;Name=HGK48_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08765 NZ_JAATTN010000227.1 Protein Homology CDS 208 621 . - 0 ID=cds-WP_010404195.1;Parent=gene-HGK48_RS08765;Dbxref=GenBank:WP_010404195.1;Name=WP_010404195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850347.1;locus_tag=HGK48_RS08765;product=hypothetical protein;protein_id=WP_010404195.1;transl_table=11 NZ_JAATTN010000227.1 RefSeq gene 699 1040 . - . ID=gene-HGK48_RS08770;Name=HGK48_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08770 NZ_JAATTN010000227.1 Protein Homology CDS 699 1040 . - 0 ID=cds-WP_010404189.1;Parent=gene-HGK48_RS08770;Dbxref=GenBank:WP_010404189.1;Name=WP_010404189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016647486.1;locus_tag=HGK48_RS08770;product=DUF1937 family protein;protein_id=WP_010404189.1;transl_table=11 NZ_JAATTN010000227.1 RefSeq gene 1281 2210 . - . ID=gene-HGK48_RS08775;Name=HGK48_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08775 NZ_JAATTN010000227.1 Protein Homology CDS 1281 2210 . - 0 ID=cds-WP_065839578.1;Parent=gene-HGK48_RS08775;Dbxref=GenBank:WP_065839578.1;Name=WP_065839578.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF017437.6;locus_tag=HGK48_RS08775;product=AAA family ATPase;protein_id=WP_065839578.1;transl_table=11 NZ_JAATTN010000227.1 RefSeq gene 2481 2833 . - . ID=gene-HGK48_RS08780;Name=HGK48_RS08780;end_range=2833,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08780;partial=true NZ_JAATTN010000227.1 GeneMarkS-2+ CDS 2481 2833 . - 2 ID=cds-WP_168236860.1;Parent=gene-HGK48_RS08780;Dbxref=GenBank:WP_168236860.1;Name=WP_168236860.1;end_range=2833,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08780;partial=true;product=hypothetical protein;protein_id=WP_168236860.1;transl_table=11 ##sequence-region NZ_JAATTN010000228.1 1 2824 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000228.1 RefSeq region 1 2824 . + . ID=NZ_JAATTN010000228.1:1..2824;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000228.1 RefSeq pseudogene 1 216 . - . ID=gene-HGK48_RS08785;Name=HGK48_RS08785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08785;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000228.1 Protein Homology CDS 1 216 . - 0 ID=cds-HGK48_RS08785;Parent=gene-HGK48_RS08785;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005871271.1;locus_tag=HGK48_RS08785;partial=true;product=peptidase M50;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000228.1 RefSeq gene 209 553 . - . ID=gene-HGK48_RS08790;Name=HGK48_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08790 NZ_JAATTN010000228.1 Protein Homology CDS 209 553 . - 0 ID=cds-WP_002848932.1;Parent=gene-HGK48_RS08790;Dbxref=GenBank:WP_002848932.1;Name=WP_002848932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848932.1;locus_tag=HGK48_RS08790;product=hypothetical protein;protein_id=WP_002848932.1;transl_table=11 NZ_JAATTN010000228.1 RefSeq gene 753 2285 . - . ID=gene-HGK48_RS08795;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=HGK48_RS08795 NZ_JAATTN010000228.1 Protein Homology CDS 753 2285 . - 0 ID=cds-WP_002848931.1;Parent=gene-HGK48_RS08795;Dbxref=GenBank:WP_002848931.1;Name=WP_002848931.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004284125.1;locus_tag=HGK48_RS08795;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_002848931.1;transl_table=11 NZ_JAATTN010000228.1 RefSeq gene 2313 2824 . - . ID=gene-HGK48_RS08800;Name=HGK48_RS08800;end_range=2824,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08800;partial=true NZ_JAATTN010000228.1 Protein Homology CDS 2313 2824 . - 2 ID=cds-WP_168236861.1;Parent=gene-HGK48_RS08800;Dbxref=GenBank:WP_168236861.1;Name=WP_168236861.1;end_range=2824,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012451.6;locus_tag=HGK48_RS08800;partial=true;product=DnaJ domain-containing protein;protein_id=WP_168236861.1;transl_table=11 ##sequence-region NZ_JAATTN010000229.1 1 2797 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000229.1 RefSeq region 1 2797 . + . ID=NZ_JAATTN010000229.1:1..2797;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000229.1 RefSeq gene 133 1347 . + . ID=gene-HGK48_RS08805;Name=HGK48_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08805 NZ_JAATTN010000229.1 Protein Homology CDS 133 1347 . + 0 ID=cds-WP_002848383.1;Parent=gene-HGK48_RS08805;Dbxref=GenBank:WP_002848383.1;Name=WP_002848383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848383.1;locus_tag=HGK48_RS08805;product=saccharopine dehydrogenase family protein;protein_id=WP_002848383.1;transl_table=11 NZ_JAATTN010000229.1 RefSeq gene 1344 1604 . + . ID=gene-HGK48_RS08810;Name=HGK48_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08810 NZ_JAATTN010000229.1 GeneMarkS-2+ CDS 1344 1604 . + 0 ID=cds-WP_002848384.1;Parent=gene-HGK48_RS08810;Dbxref=GenBank:WP_002848384.1;Name=WP_002848384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08810;product=hypothetical protein;protein_id=WP_002848384.1;transl_table=11 NZ_JAATTN010000229.1 RefSeq gene 1665 1865 . + . ID=gene-HGK48_RS08815;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=HGK48_RS08815 NZ_JAATTN010000229.1 Protein Homology CDS 1665 1865 . + 0 ID=cds-WP_002848387.1;Parent=gene-HGK48_RS08815;Dbxref=GenBank:WP_002848387.1;Name=WP_002848387.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343615.1;locus_tag=HGK48_RS08815;product=50S ribosomal protein L31;protein_id=WP_002848387.1;transl_table=11 NZ_JAATTN010000229.1 RefSeq gene 1870 2685 . + . ID=gene-HGK48_RS08820;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=HGK48_RS08820 NZ_JAATTN010000229.1 Protein Homology CDS 1870 2685 . + 0 ID=cds-WP_011731765.1;Parent=gene-HGK48_RS08820;Dbxref=GenBank:WP_011731765.1;Name=WP_011731765.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731765.1;locus_tag=HGK48_RS08820;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_011731765.1;transl_table=11 ##sequence-region NZ_JAATTN010000022.1 1 12929 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000022.1 RefSeq region 1 12929 . + . ID=NZ_JAATTN010000022.1:1..12929;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000022.1 RefSeq gene 127 438 . + . ID=gene-HGK48_RS02170;Name=HGK48_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02170 NZ_JAATTN010000022.1 Protein Homology CDS 127 438 . + 0 ID=cds-WP_002850963.1;Parent=gene-HGK48_RS02170;Dbxref=GenBank:WP_002850963.1;Name=WP_002850963.1;Ontology_term=GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850963.1;locus_tag=HGK48_RS02170;product=nucleotidyltransferase family protein;protein_id=WP_002850963.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 431 862 . + . ID=gene-HGK48_RS02175;Name=HGK48_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02175 NZ_JAATTN010000022.1 Protein Homology CDS 431 862 . + 0 ID=cds-WP_002850961.1;Parent=gene-HGK48_RS02175;Dbxref=GenBank:WP_002850961.1;Name=WP_002850961.1;Ontology_term=GO:0004540,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: protein motif:HMM:NF014043.6;locus_tag=HGK48_RS02175;product=HepT-like ribonuclease domain-containing protein;protein_id=WP_002850961.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 866 1702 . + . ID=gene-HGK48_RS02180;Name=HGK48_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02180 NZ_JAATTN010000022.1 Protein Homology CDS 866 1702 . + 0 ID=cds-WP_002850958.1;Parent=gene-HGK48_RS02180;Dbxref=GenBank:WP_002850958.1;Name=WP_002850958.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850958.1;locus_tag=HGK48_RS02180;product=Fic family protein;protein_id=WP_002850958.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 1702 2622 . + . ID=gene-HGK48_RS02185;Name=HGK48_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02185 NZ_JAATTN010000022.1 Protein Homology CDS 1702 2622 . + 0 ID=cds-WP_002850956.1;Parent=gene-HGK48_RS02185;Dbxref=GenBank:WP_002850956.1;Name=WP_002850956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850956.1;locus_tag=HGK48_RS02185;product=Fic family protein;protein_id=WP_002850956.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 2836 3144 . + . ID=gene-HGK48_RS02190;Name=HGK48_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02190 NZ_JAATTN010000022.1 GeneMarkS-2+ CDS 2836 3144 . + 0 ID=cds-WP_024305489.1;Parent=gene-HGK48_RS02190;Dbxref=GenBank:WP_024305489.1;Name=WP_024305489.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02190;product=hypothetical protein;protein_id=WP_024305489.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 3176 3808 . - . ID=gene-HGK48_RS02195;Name=HGK48_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02195 NZ_JAATTN010000022.1 Protein Homology CDS 3176 3808 . - 0 ID=cds-WP_059431089.1;Parent=gene-HGK48_RS02195;Dbxref=GenBank:WP_059431089.1;Name=WP_059431089.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: protein motif:HMM:NF018154.6;locus_tag=HGK48_RS02195;product=zeta toxin family protein;protein_id=WP_059431089.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 3818 4051 . - . ID=gene-HGK48_RS02200;Name=HGK48_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02200 NZ_JAATTN010000022.1 GeneMarkS-2+ CDS 3818 4051 . - 0 ID=cds-WP_024305484.1;Parent=gene-HGK48_RS02200;Dbxref=GenBank:WP_024305484.1;Name=WP_024305484.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02200;product=hypothetical protein;protein_id=WP_024305484.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 4181 5176 . - . ID=gene-HGK48_RS02205;Name=mobP1;gbkey=Gene;gene=mobP1;gene_biotype=protein_coding;locus_tag=HGK48_RS02205 NZ_JAATTN010000022.1 Protein Homology CDS 4181 5176 . - 0 ID=cds-WP_240944802.1;Parent=gene-HGK48_RS02205;Dbxref=GenBank:WP_240944802.1;Name=WP_240944802.1;gbkey=CDS;gene=mobP1;inference=COORDINATES: protein motif:HMM:NF041450.1;locus_tag=HGK48_RS02205;product=MobP1 family relaxase;protein_id=WP_240944802.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 5196 5558 . - . ID=gene-HGK48_RS11150;Name=HGK48_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11150 NZ_JAATTN010000022.1 GeneMarkS-2+ CDS 5196 5558 . - 0 ID=cds-WP_240944803.1;Parent=gene-HGK48_RS11150;Dbxref=GenBank:WP_240944803.1;Name=WP_240944803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11150;product=hypothetical protein;protein_id=WP_240944803.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 5560 6102 . - . ID=gene-HGK48_RS02210;Name=HGK48_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02210 NZ_JAATTN010000022.1 GeneMarkS-2+ CDS 5560 6102 . - 0 ID=cds-WP_024305482.1;Parent=gene-HGK48_RS02210;Dbxref=GenBank:WP_024305482.1;Name=WP_024305482.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02210;product=hypothetical protein;protein_id=WP_024305482.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 6319 6555 . + . ID=gene-HGK48_RS02215;Name=HGK48_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02215 NZ_JAATTN010000022.1 GeneMarkS-2+ CDS 6319 6555 . + 0 ID=cds-WP_024305481.1;Parent=gene-HGK48_RS02215;Dbxref=GenBank:WP_024305481.1;Name=WP_024305481.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02215;product=hypothetical protein;protein_id=WP_024305481.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 6563 6943 . + . ID=gene-HGK48_RS02220;Name=HGK48_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02220 NZ_JAATTN010000022.1 GeneMarkS-2+ CDS 6563 6943 . + 0 ID=cds-WP_024305480.1;Parent=gene-HGK48_RS02220;Dbxref=GenBank:WP_024305480.1;Name=WP_024305480.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02220;product=hypothetical protein;protein_id=WP_024305480.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 7368 7793 . + . ID=gene-HGK48_RS02225;Name=HGK48_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02225 NZ_JAATTN010000022.1 GeneMarkS-2+ CDS 7368 7793 . + 0 ID=cds-WP_024305425.1;Parent=gene-HGK48_RS02225;Dbxref=GenBank:WP_024305425.1;Name=WP_024305425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02225;product=hypothetical protein;protein_id=WP_024305425.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 7803 8258 . + . ID=gene-HGK48_RS02230;Name=HGK48_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02230 NZ_JAATTN010000022.1 GeneMarkS-2+ CDS 7803 8258 . + 0 ID=cds-WP_168236659.1;Parent=gene-HGK48_RS02230;Dbxref=GenBank:WP_168236659.1;Name=WP_168236659.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02230;product=hypothetical protein;protein_id=WP_168236659.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 8318 8617 . + . ID=gene-HGK48_RS02235;Name=HGK48_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02235 NZ_JAATTN010000022.1 GeneMarkS-2+ CDS 8318 8617 . + 0 ID=cds-WP_065840830.1;Parent=gene-HGK48_RS02235;Dbxref=GenBank:WP_065840830.1;Name=WP_065840830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02235;product=hypothetical protein;protein_id=WP_065840830.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 8734 9150 . - . ID=gene-HGK48_RS02240;Name=HGK48_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02240 NZ_JAATTN010000022.1 GeneMarkS-2+ CDS 8734 9150 . - 0 ID=cds-WP_024305198.1;Parent=gene-HGK48_RS02240;Dbxref=GenBank:WP_024305198.1;Name=WP_024305198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02240;product=hypothetical protein;protein_id=WP_024305198.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 9222 9857 . + . ID=gene-HGK48_RS02245;Name=HGK48_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02245 NZ_JAATTN010000022.1 Protein Homology CDS 9222 9857 . + 0 ID=cds-WP_024305199.1;Parent=gene-HGK48_RS02245;Dbxref=GenBank:WP_024305199.1;Name=WP_024305199.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662280.1;locus_tag=HGK48_RS02245;product=recombinase family protein;protein_id=WP_024305199.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 9970 11757 . - . ID=gene-HGK48_RS02250;Name=HGK48_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02250 NZ_JAATTN010000022.1 Protein Homology CDS 9970 11757 . - 0 ID=cds-WP_059431096.1;Parent=gene-HGK48_RS02250;Dbxref=GenBank:WP_059431096.1;Name=WP_059431096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002835057.1;locus_tag=HGK48_RS02250;product=AAA family ATPase;protein_id=WP_059431096.1;transl_table=11 NZ_JAATTN010000022.1 RefSeq gene 12606 12884 . + . ID=gene-HGK48_RS02255;Name=HGK48_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02255 NZ_JAATTN010000022.1 Protein Homology CDS 12606 12884 . + 0 ID=cds-WP_158004942.1;Parent=gene-HGK48_RS02255;Dbxref=GenBank:WP_158004942.1;Name=WP_158004942.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033894.1;locus_tag=HGK48_RS02255;product=EexN family lipoprotein;protein_id=WP_158004942.1;transl_table=11 ##sequence-region NZ_JAATTN010000230.1 1 2795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000230.1 RefSeq region 1 2795 . + . ID=NZ_JAATTN010000230.1:1..2795;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000230.1 RefSeq gene 1 463 . - . ID=gene-HGK48_RS08830;Name=HGK48_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08830;partial=true;start_range=.,1 NZ_JAATTN010000230.1 GeneMarkS-2+ CDS 1 463 . - 0 ID=cds-WP_168236862.1;Parent=gene-HGK48_RS08830;Dbxref=GenBank:WP_168236862.1;Name=WP_168236862.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08830;partial=true;product=hypothetical protein;protein_id=WP_168236862.1;start_range=.,1;transl_table=11 NZ_JAATTN010000230.1 RefSeq gene 620 2795 . - . ID=gene-HGK48_RS08835;Name=HGK48_RS08835;end_range=2795,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08835;partial=true NZ_JAATTN010000230.1 Protein Homology CDS 620 2795 . - 1 ID=cds-WP_168236863.1;Parent=gene-HGK48_RS08835;Dbxref=GenBank:WP_168236863.1;Name=WP_168236863.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;end_range=2795,.;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731883.1;locus_tag=HGK48_RS08835;partial=true;product=endonuclease MutS2;protein_id=WP_168236863.1;transl_table=11 ##sequence-region NZ_JAATTN010000231.1 1 2783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000231.1 RefSeq region 1 2783 . + . ID=NZ_JAATTN010000231.1:1..2783;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000231.1 RefSeq gene 1 197 . + . ID=gene-HGK48_RS08840;Name=HGK48_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08840;partial=true;start_range=.,1 NZ_JAATTN010000231.1 Protein Homology CDS 1 197 . + 2 ID=cds-WP_206120320.1;Parent=gene-HGK48_RS08840;Dbxref=GenBank:WP_206120320.1;Name=WP_206120320.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012920.6;locus_tag=HGK48_RS08840;partial=true;product=S24 family peptidase;protein_id=WP_206120320.1;start_range=.,1;transl_table=11 NZ_JAATTN010000231.1 RefSeq gene 345 1919 . - . ID=gene-HGK48_RS08845;Name=HGK48_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08845 NZ_JAATTN010000231.1 Protein Homology CDS 345 1919 . - 0 ID=cds-WP_168236865.1;Parent=gene-HGK48_RS08845;Dbxref=GenBank:WP_168236865.1;Name=WP_168236865.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002778415.1;locus_tag=HGK48_RS08845;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_168236865.1;transl_table=11 NZ_JAATTN010000231.1 RefSeq pseudogene 1932 2672 . - . ID=gene-HGK48_RS08850;Name=HGK48_RS08850;end_range=2672,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08850;partial=true;pseudo=true NZ_JAATTN010000231.1 Protein Homology CDS 1932 2672 . - 0 ID=cds-HGK48_RS08850;Parent=gene-HGK48_RS08850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2672,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002824933.1;locus_tag=HGK48_RS08850;partial=true;product=DapH/DapD/GlmU-related protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000232.1 1 2737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000232.1 RefSeq region 1 2737 . + . ID=NZ_JAATTN010000232.1:1..2737;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000232.1 RefSeq gene 68 2464 . - . ID=gene-HGK48_RS08855;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=HGK48_RS08855 NZ_JAATTN010000232.1 Protein Homology CDS 68 2464 . - 0 ID=cds-WP_002849628.1;Parent=gene-HGK48_RS08855;Dbxref=GenBank:WP_002849628.1;Name=WP_002849628.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009650222.1;locus_tag=HGK48_RS08855;product=endopeptidase La;protein_id=WP_002849628.1;transl_table=11 NZ_JAATTN010000232.1 RefSeq pseudogene 2473 2737 . - . ID=gene-HGK48_RS08860;Name=HGK48_RS08860;end_range=2737,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08860;partial=true;pseudo=true NZ_JAATTN010000232.1 Protein Homology CDS 2473 2737 . - 1 ID=cds-HGK48_RS08860;Parent=gene-HGK48_RS08860;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2737,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849630.1;locus_tag=HGK48_RS08860;partial=true;product=outer membrane protein assembly factor BamD;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000233.1 1 2656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000233.1 RefSeq region 1 2656 . + . ID=NZ_JAATTN010000233.1:1..2656;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000233.1 RefSeq gene 287 1399 . + . ID=gene-HGK48_RS08865;Name=HGK48_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08865 NZ_JAATTN010000233.1 Protein Homology CDS 287 1399 . + 0 ID=cds-WP_240944837.1;Parent=gene-HGK48_RS08865;Dbxref=GenBank:WP_240944837.1;Name=WP_240944837.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: protein motif:HMM:NF013073.7;locus_tag=HGK48_RS08865;product=M15 family metallopeptidase;protein_id=WP_240944837.1;transl_table=11 NZ_JAATTN010000233.1 RefSeq gene 1417 2571 . - . ID=gene-HGK48_RS08870;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=HGK48_RS08870 NZ_JAATTN010000233.1 Protein Homology CDS 1417 2571 . - 0 ID=cds-WP_002848962.1;Parent=gene-HGK48_RS08870;Dbxref=GenBank:WP_002848962.1;Name=WP_002848962.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848962.1;locus_tag=HGK48_RS08870;product=cell division protein FtsZ;protein_id=WP_002848962.1;transl_table=11 ##sequence-region NZ_JAATTN010000234.1 1 2731 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000234.1 RefSeq region 1 2731 . + . ID=NZ_JAATTN010000234.1:1..2731;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000234.1 RefSeq gene 284 658 . + . ID=gene-HGK48_RS11585;Name=HGK48_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11585 NZ_JAATTN010000234.1 Protein Homology CDS 284 658 . + 0 ID=cds-WP_010404226.1;Parent=gene-HGK48_RS11585;Dbxref=GenBank:WP_010404226.1;Name=WP_010404226.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF015867.6;locus_tag=HGK48_RS11585;product=ComEA family DNA-binding protein;protein_id=WP_010404226.1;transl_table=11 NZ_JAATTN010000234.1 RefSeq gene 914 989 . + . ID=gene-HGK48_RS08880;Name=HGK48_RS08880;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS08880 NZ_JAATTN010000234.1 tRNAscan-SE tRNA 914 989 . + . ID=rna-HGK48_RS08880;Parent=gene-HGK48_RS08880;anticodon=(pos:947..949);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS08880;product=tRNA-Lys NZ_JAATTN010000234.1 tRNAscan-SE exon 914 989 . + . ID=exon-HGK48_RS08880-1;Parent=rna-HGK48_RS08880;anticodon=(pos:947..949);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS08880;product=tRNA-Lys NZ_JAATTN010000234.1 RefSeq gene 1004 1079 . + . ID=gene-HGK48_RS08885;Name=HGK48_RS08885;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS08885 NZ_JAATTN010000234.1 tRNAscan-SE tRNA 1004 1079 . + . ID=rna-HGK48_RS08885;Parent=gene-HGK48_RS08885;anticodon=(pos:1037..1039);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS08885;product=tRNA-Val NZ_JAATTN010000234.1 tRNAscan-SE exon 1004 1079 . + . ID=exon-HGK48_RS08885-1;Parent=rna-HGK48_RS08885;anticodon=(pos:1037..1039);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS08885;product=tRNA-Val NZ_JAATTN010000234.1 RefSeq gene 1091 1167 . + . ID=gene-HGK48_RS08890;Name=HGK48_RS08890;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS08890 NZ_JAATTN010000234.1 tRNAscan-SE tRNA 1091 1167 . + . ID=rna-HGK48_RS08890;Parent=gene-HGK48_RS08890;anticodon=(pos:1125..1127);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS08890;product=tRNA-Asp NZ_JAATTN010000234.1 tRNAscan-SE exon 1091 1167 . + . ID=exon-HGK48_RS08890-1;Parent=rna-HGK48_RS08890;anticodon=(pos:1125..1127);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS08890;product=tRNA-Asp NZ_JAATTN010000234.1 RefSeq gene 1205 1280 . + . ID=gene-HGK48_RS08895;Name=HGK48_RS08895;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS08895 NZ_JAATTN010000234.1 tRNAscan-SE tRNA 1205 1280 . + . ID=rna-HGK48_RS08895;Parent=gene-HGK48_RS08895;anticodon=(pos:1238..1240);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS08895;product=tRNA-Lys NZ_JAATTN010000234.1 tRNAscan-SE exon 1205 1280 . + . ID=exon-HGK48_RS08895-1;Parent=rna-HGK48_RS08895;anticodon=(pos:1238..1240);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS08895;product=tRNA-Lys NZ_JAATTN010000234.1 RefSeq gene 1302 1376 . + . ID=gene-HGK48_RS08900;Name=HGK48_RS08900;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS08900 NZ_JAATTN010000234.1 tRNAscan-SE tRNA 1302 1376 . + . ID=rna-HGK48_RS08900;Parent=gene-HGK48_RS08900;anticodon=(pos:1335..1337);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS08900;product=tRNA-Glu NZ_JAATTN010000234.1 tRNAscan-SE exon 1302 1376 . + . ID=exon-HGK48_RS08900-1;Parent=rna-HGK48_RS08900;anticodon=(pos:1335..1337);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS08900;product=tRNA-Glu NZ_JAATTN010000234.1 RefSeq gene 1497 2654 . + . ID=gene-HGK48_RS08905;Name=HGK48_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08905 NZ_JAATTN010000234.1 Protein Homology CDS 1497 2654 . + 0 ID=cds-WP_002849003.1;Parent=gene-HGK48_RS08905;Dbxref=GenBank:WP_002849003.1;Name=WP_002849003.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=HGK48_RS08905;product=GGDEF domain-containing protein;protein_id=WP_002849003.1;transl_table=11 ##sequence-region NZ_JAATTN010000235.1 1 2726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000235.1 RefSeq region 1 2726 . + . ID=NZ_JAATTN010000235.1:1..2726;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000235.1 RefSeq pseudogene 1 1059 . - . ID=gene-HGK48_RS08910;Name=HGK48_RS08910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS08910;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000235.1 Protein Homology CDS 1 1059 . - 0 ID=cds-HGK48_RS08910;Parent=gene-HGK48_RS08910;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344331.1;locus_tag=HGK48_RS08910;partial=true;product=biotin attachment protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000235.1 RefSeq gene 1087 2463 . - . ID=gene-HGK48_RS08915;Name=HGK48_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08915 NZ_JAATTN010000235.1 Protein Homology CDS 1087 2463 . - 0 ID=cds-WP_002850085.1;Parent=gene-HGK48_RS08915;Dbxref=GenBank:WP_002850085.1;Name=WP_002850085.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850085.1;locus_tag=HGK48_RS08915;product=sodium-dependent transporter;protein_id=WP_002850085.1;transl_table=11 ##sequence-region NZ_JAATTN010000236.1 1 2718 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000236.1 RefSeq region 1 2718 . + . ID=NZ_JAATTN010000236.1:1..2718;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000236.1 RefSeq gene 130 2001 . + . ID=gene-HGK48_RS08920;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=HGK48_RS08920 NZ_JAATTN010000236.1 Protein Homology CDS 130 2001 . + 0 ID=cds-WP_002848863.1;Parent=gene-HGK48_RS08920;Dbxref=GenBank:WP_002848863.1;Name=WP_002848863.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731852.1;locus_tag=HGK48_RS08920;product=RNA polymerase sigma factor RpoD;protein_id=WP_002848863.1;transl_table=11 NZ_JAATTN010000236.1 RefSeq gene 2052 2718 . - . ID=gene-HGK48_RS08925;Name=HGK48_RS08925;end_range=2718,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08925;partial=true NZ_JAATTN010000236.1 Protein Homology CDS 2052 2718 . - 1 ID=cds-WP_168236867.1;Parent=gene-HGK48_RS08925;Dbxref=GenBank:WP_168236867.1;Name=WP_168236867.1;end_range=2718,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848862.1;locus_tag=HGK48_RS08925;partial=true;product=flagellin;protein_id=WP_168236867.1;transl_table=11 ##sequence-region NZ_JAATTN010000237.1 1 2682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000237.1 RefSeq region 1 2682 . + . ID=NZ_JAATTN010000237.1:1..2682;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000237.1 RefSeq gene 66 1046 . + . ID=gene-HGK48_RS08930;Name=HGK48_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08930 NZ_JAATTN010000237.1 GeneMarkS-2+ CDS 66 1046 . + 0 ID=cds-WP_002848759.1;Parent=gene-HGK48_RS08930;Dbxref=GenBank:WP_002848759.1;Name=WP_002848759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08930;product=hypothetical protein;protein_id=WP_002848759.1;transl_table=11 NZ_JAATTN010000237.1 RefSeq gene 1380 2489 . + . ID=gene-HGK48_RS08935;Name=HGK48_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08935 NZ_JAATTN010000237.1 GeneMarkS-2+ CDS 1380 2489 . + 0 ID=cds-WP_233445178.1;Parent=gene-HGK48_RS08935;Dbxref=GenBank:WP_233445178.1;Name=WP_233445178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08935;product=hypothetical protein;protein_id=WP_233445178.1;transl_table=11 ##sequence-region NZ_JAATTN010000238.1 1 2671 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000238.1 RefSeq region 1 2671 . + . ID=NZ_JAATTN010000238.1:1..2671;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000238.1 RefSeq gene 1 618 . + . ID=gene-HGK48_RS08940;Name=HGK48_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08940;partial=true;start_range=.,1 NZ_JAATTN010000238.1 Protein Homology CDS 1 618 . + 0 ID=cds-WP_457550919.1;Parent=gene-HGK48_RS08940;Dbxref=GenBank:WP_457550919.1;Name=WP_457550919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002939420.1;locus_tag=HGK48_RS08940;partial=true;product=ATP synthase beta subunit C-terminal domain-containing protein;protein_id=WP_457550919.1;start_range=.,1;transl_table=11 NZ_JAATTN010000238.1 RefSeq gene 636 1025 . + . ID=gene-HGK48_RS08945;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=HGK48_RS08945 NZ_JAATTN010000238.1 Protein Homology CDS 636 1025 . + 0 ID=cds-WP_002850539.1;Parent=gene-HGK48_RS08945;Dbxref=GenBank:WP_002850539.1;Name=WP_002850539.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpC;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850539.1;locus_tag=HGK48_RS08945;product=ATP synthase F1 subunit epsilon;protein_id=WP_002850539.1;transl_table=11 NZ_JAATTN010000238.1 RefSeq gene 1026 1625 . + . ID=gene-HGK48_RS08950;Name=HGK48_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08950 NZ_JAATTN010000238.1 Protein Homology CDS 1026 1625 . + 0 ID=cds-WP_011732235.1;Parent=gene-HGK48_RS08950;Dbxref=GenBank:WP_011732235.1;Name=WP_011732235.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732235.1;locus_tag=HGK48_RS08950;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_011732235.1;transl_table=11 NZ_JAATTN010000238.1 RefSeq gene 1612 2004 . + . ID=gene-HGK48_RS08955;Name=HGK48_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08955 NZ_JAATTN010000238.1 Protein Homology CDS 1612 2004 . + 0 ID=cds-WP_002850537.1;Parent=gene-HGK48_RS08955;Dbxref=GenBank:WP_002850537.1;Name=WP_002850537.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002947482.1;locus_tag=HGK48_RS08955;product=biopolymer transporter ExbD;protein_id=WP_002850537.1;transl_table=11 NZ_JAATTN010000238.1 RefSeq gene 2006 2671 . + . ID=gene-HGK48_RS08960;Name=HGK48_RS08960;end_range=2671,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08960;partial=true NZ_JAATTN010000238.1 GeneMarkS-2+ CDS 2006 2671 . + 0 ID=cds-WP_168236868.1;Parent=gene-HGK48_RS08960;Dbxref=GenBank:WP_168236868.1;Name=WP_168236868.1;end_range=2671,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08960;partial=true;product=hypothetical protein;protein_id=WP_168236868.1;transl_table=11 ##sequence-region NZ_JAATTN010000239.1 1 2592 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000239.1 RefSeq region 1 2592 . + . ID=NZ_JAATTN010000239.1:1..2592;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000239.1 RefSeq gene 156 2021 . - . ID=gene-HGK48_RS08965;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=HGK48_RS08965 NZ_JAATTN010000239.1 Protein Homology CDS 156 2021 . - 0 ID=cds-WP_002850412.1;Parent=gene-HGK48_RS08965;Dbxref=GenBank:WP_002850412.1;Name=WP_002850412.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850412.1;locus_tag=HGK48_RS08965;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_002850412.1;transl_table=11 NZ_JAATTN010000239.1 RefSeq gene 2124 2592 . + . ID=gene-HGK48_RS08970;Name=HGK48_RS08970;end_range=2592,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08970;partial=true NZ_JAATTN010000239.1 Protein Homology CDS 2124 2592 . + 0 ID=cds-WP_168236869.1;Parent=gene-HGK48_RS08970;Dbxref=GenBank:WP_168236869.1;Name=WP_168236869.1;end_range=2592,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002873161.1;locus_tag=HGK48_RS08970;partial=true;product=riboflavin synthase family protein;protein_id=WP_168236869.1;transl_table=11 ##sequence-region NZ_JAATTN010000023.1 1 12891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000023.1 RefSeq region 1 12891 . + . ID=NZ_JAATTN010000023.1:1..12891;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000023.1 RefSeq gene 122 1225 . - . ID=gene-HGK48_RS02260;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=HGK48_RS02260 NZ_JAATTN010000023.1 Protein Homology CDS 122 1225 . - 0 ID=cds-WP_002849529.1;Parent=gene-HGK48_RS02260;Dbxref=GenBank:WP_002849529.1;Name=WP_002849529.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849529.1;locus_tag=HGK48_RS02260;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_002849529.1;transl_table=11 NZ_JAATTN010000023.1 RefSeq gene 1228 1974 . - . ID=gene-HGK48_RS02265;Name=HGK48_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02265 NZ_JAATTN010000023.1 Protein Homology CDS 1228 1974 . - 0 ID=cds-WP_002849530.1;Parent=gene-HGK48_RS02265;Dbxref=GenBank:WP_002849530.1;Name=WP_002849530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732026.1;locus_tag=HGK48_RS02265;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_002849530.1;transl_table=11 NZ_JAATTN010000023.1 RefSeq gene 1971 3080 . - . ID=gene-HGK48_RS02270;Name=HGK48_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02270 NZ_JAATTN010000023.1 Protein Homology CDS 1971 3080 . - 0 ID=cds-WP_002849531.1;Parent=gene-HGK48_RS02270;Dbxref=GenBank:WP_002849531.1;Name=WP_002849531.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024206.6;locus_tag=HGK48_RS02270;product=ankyrin repeat domain-containing protein;protein_id=WP_002849531.1;transl_table=11 NZ_JAATTN010000023.1 RefSeq gene 3083 4510 . - . ID=gene-HGK48_RS02275;Name=HGK48_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02275 NZ_JAATTN010000023.1 Protein Homology CDS 3083 4510 . - 0 ID=cds-WP_011732027.1;Parent=gene-HGK48_RS02275;Dbxref=GenBank:WP_011732027.1;Name=WP_011732027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002947996.1;locus_tag=HGK48_RS02275;product=COG3400 family protein;protein_id=WP_011732027.1;transl_table=11 NZ_JAATTN010000023.1 RefSeq gene 4548 5672 . + . ID=gene-HGK48_RS02280;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=HGK48_RS02280 NZ_JAATTN010000023.1 Protein Homology CDS 4548 5672 . + 0 ID=cds-WP_002849532.1;Parent=gene-HGK48_RS02280;Dbxref=GenBank:WP_002849532.1;Name=WP_002849532.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849532.1;locus_tag=HGK48_RS02280;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_002849532.1;transl_table=11 NZ_JAATTN010000023.1 RefSeq gene 5669 6400 . + . ID=gene-HGK48_RS02285;Name=HGK48_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02285 NZ_JAATTN010000023.1 Protein Homology CDS 5669 6400 . + 0 ID=cds-WP_002849533.1;Parent=gene-HGK48_RS02285;Dbxref=GenBank:WP_002849533.1;Name=WP_002849533.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013694.6;locus_tag=HGK48_RS02285;product=CorA family divalent cation transporter;protein_id=WP_002849533.1;transl_table=11 NZ_JAATTN010000023.1 RefSeq gene 6460 7848 . - . ID=gene-HGK48_RS02290;Name=HGK48_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02290 NZ_JAATTN010000023.1 Protein Homology CDS 6460 7848 . - 0 ID=cds-WP_024305236.1;Parent=gene-HGK48_RS02290;Dbxref=GenBank:WP_024305236.1;Name=WP_024305236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002856770.1;locus_tag=HGK48_RS02290;product=replicative DNA helicase;protein_id=WP_024305236.1;transl_table=11 NZ_JAATTN010000023.1 RefSeq gene 7853 8923 . - . ID=gene-HGK48_RS02295;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=HGK48_RS02295 NZ_JAATTN010000023.1 Protein Homology CDS 7853 8923 . - 0 ID=cds-WP_002849534.1;Parent=gene-HGK48_RS02295;Dbxref=GenBank:WP_002849534.1;Name=WP_002849534.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849534.1;locus_tag=HGK48_RS02295;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_002849534.1;transl_table=11 NZ_JAATTN010000023.1 RefSeq gene 9055 9720 . - . ID=gene-HGK48_RS02300;Name=HGK48_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02300 NZ_JAATTN010000023.1 Protein Homology CDS 9055 9720 . - 0 ID=cds-WP_002849535.1;Parent=gene-HGK48_RS02300;Dbxref=GenBank:WP_002849535.1;Name=WP_002849535.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849535.1;locus_tag=HGK48_RS02300;product=M48 family metallopeptidase;protein_id=WP_002849535.1;transl_table=11 NZ_JAATTN010000023.1 RefSeq gene 9713 12784 . - . ID=gene-HGK48_RS02305;Name=HGK48_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02305 NZ_JAATTN010000023.1 Protein Homology CDS 9713 12784 . - 0 ID=cds-WP_002849536.1;Parent=gene-HGK48_RS02305;Dbxref=GenBank:WP_002849536.1;Name=WP_002849536.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849536.1;locus_tag=HGK48_RS02305;product=type I restriction endonuclease subunit R;protein_id=WP_002849536.1;transl_table=11 ##sequence-region NZ_JAATTN010000240.1 1 2660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000240.1 RefSeq region 1 2660 . + . ID=NZ_JAATTN010000240.1:1..2660;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000240.1 RefSeq gene 1 262 . + . ID=gene-HGK48_RS08975;Name=HGK48_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08975;partial=true;start_range=.,1 NZ_JAATTN010000240.1 Protein Homology CDS 1 262 . + 1 ID=cds-WP_277346440.1;Parent=gene-HGK48_RS08975;Dbxref=GenBank:WP_277346440.1;Name=WP_277346440.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002785602.1;locus_tag=HGK48_RS08975;partial=true;product=formyltransferase family protein;protein_id=WP_277346440.1;start_range=.,1;transl_table=11 NZ_JAATTN010000240.1 RefSeq gene 263 751 . + . ID=gene-HGK48_RS08980;Name=HGK48_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08980 NZ_JAATTN010000240.1 Protein Homology CDS 263 751 . + 0 ID=cds-WP_011731968.1;Parent=gene-HGK48_RS08980;Dbxref=GenBank:WP_011731968.1;Name=WP_011731968.1;Ontology_term=GO:0001510,GO:0003723,GO:0008173,GO:0141098,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,tRNA (cytidine(34)-2'-O)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731968.1;locus_tag=HGK48_RS08980;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_011731968.1;transl_table=11 NZ_JAATTN010000240.1 RefSeq gene 739 2034 . + . ID=gene-HGK48_RS08985;Name=HGK48_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08985 NZ_JAATTN010000240.1 Protein Homology CDS 739 2034 . + 0 ID=cds-WP_011731969.1;Parent=gene-HGK48_RS08985;Dbxref=GenBank:WP_011731969.1;Name=WP_011731969.1;Ontology_term=GO:0003677,GO:0016787,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF015338.6;locus_tag=HGK48_RS08985;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_011731969.1;transl_table=11 NZ_JAATTN010000240.1 RefSeq gene 2027 2209 . + . ID=gene-HGK48_RS08990;Name=HGK48_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08990 NZ_JAATTN010000240.1 GeneMarkS-2+ CDS 2027 2209 . + 0 ID=cds-WP_010393466.1;Parent=gene-HGK48_RS08990;Dbxref=GenBank:WP_010393466.1;Name=WP_010393466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS08990;product=hypothetical protein;protein_id=WP_010393466.1;transl_table=11 NZ_JAATTN010000240.1 RefSeq gene 2316 2660 . + . ID=gene-HGK48_RS08995;Name=HGK48_RS08995;end_range=2660,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS08995;partial=true NZ_JAATTN010000240.1 Protein Homology CDS 2316 2660 . + 0 ID=cds-WP_168236870.1;Parent=gene-HGK48_RS08995;Dbxref=GenBank:WP_168236870.1;Name=WP_168236870.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;end_range=2660,.;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731970.1;locus_tag=HGK48_RS08995;partial=true;product=glycine--tRNA ligase subunit beta;protein_id=WP_168236870.1;transl_table=11 ##sequence-region NZ_JAATTN010000241.1 1 2631 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000241.1 RefSeq region 1 2631 . + . ID=NZ_JAATTN010000241.1:1..2631;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000241.1 RefSeq gene 1 278 . + . ID=gene-HGK48_RS09000;Name=HGK48_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09000;partial=true;start_range=.,1 NZ_JAATTN010000241.1 Protein Homology CDS 1 278 . + 2 ID=cds-WP_168236871.1;Parent=gene-HGK48_RS09000;Dbxref=GenBank:WP_168236871.1;Name=WP_168236871.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731755.1;locus_tag=HGK48_RS09000;partial=true;product=ABC transporter permease;protein_id=WP_168236871.1;start_range=.,1;transl_table=11 NZ_JAATTN010000241.1 RefSeq gene 297 713 . - . ID=gene-HGK48_RS09005;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=HGK48_RS09005 NZ_JAATTN010000241.1 Protein Homology CDS 297 713 . - 0 ID=cds-WP_002848342.1;Parent=gene-HGK48_RS09005;Dbxref=GenBank:WP_002848342.1;Name=WP_002848342.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848342.1;locus_tag=HGK48_RS09005;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_002848342.1;transl_table=11 NZ_JAATTN010000241.1 RefSeq gene 796 2598 . - . ID=gene-HGK48_RS09010;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=HGK48_RS09010 NZ_JAATTN010000241.1 Protein Homology CDS 796 2598 . - 0 ID=cds-WP_002848344.1;Parent=gene-HGK48_RS09010;Dbxref=GenBank:WP_002848344.1;Name=WP_002848344.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848344.1;locus_tag=HGK48_RS09010;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_002848344.1;transl_table=11 ##sequence-region NZ_JAATTN010000242.1 1 2629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000242.1 RefSeq region 1 2629 . + . ID=NZ_JAATTN010000242.1:1..2629;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000242.1 RefSeq gene 1 1492 . - . ID=gene-HGK48_RS09015;Name=HGK48_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09015;partial=true;start_range=.,1 NZ_JAATTN010000242.1 Protein Homology CDS 1 1492 . - 0 ID=cds-WP_168236872.1;Parent=gene-HGK48_RS09015;Dbxref=GenBank:WP_168236872.1;Name=WP_168236872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002927610.1;locus_tag=HGK48_RS09015;partial=true;product=multicopper oxidase family protein;protein_id=WP_168236872.1;start_range=.,1;transl_table=11 NZ_JAATTN010000242.1 RefSeq gene 1714 2629 . + . ID=gene-HGK48_RS09020;Name=HGK48_RS09020;end_range=2629,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09020;partial=true NZ_JAATTN010000242.1 Protein Homology CDS 1714 2629 . + 0 ID=cds-WP_277346442.1;Parent=gene-HGK48_RS09020;Dbxref=GenBank:WP_277346442.1;Name=WP_277346442.1;Ontology_term=GO:0007165;end_range=2629,.;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732157.1;locus_tag=HGK48_RS09020;partial=true;product=PDC sensor domain-containing protein;protein_id=WP_277346442.1;transl_table=11 ##sequence-region NZ_JAATTN010000243.1 1 2619 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000243.1 RefSeq region 1 2619 . + . ID=NZ_JAATTN010000243.1:1..2619;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000243.1 RefSeq pseudogene 181 2270 . + . ID=gene-HGK48_RS09025;Name=cfrA;gbkey=Gene;gene=cfrA;gene_biotype=pseudogene;locus_tag=HGK48_RS09025;pseudo=true NZ_JAATTN010000243.1 Protein Homology CDS 181 2270 . + 0 ID=cds-HGK48_RS09025;Parent=gene-HGK48_RS09025;Note=frameshifted;Ontology_term=GO:0044718,GO:0015344;gbkey=CDS;gene=cfrA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transmembrane transport|0044718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002790453.1;locus_tag=HGK48_RS09025;product=TonB-dependent ferric enterobactin receptor CfrA;pseudo=true;transl_table=11 NZ_JAATTN010000243.1 RefSeq gene 2444 2608 . + . ID=gene-HGK48_RS09030;Name=HGK48_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09030 NZ_JAATTN010000243.1 Protein Homology CDS 2444 2608 . + 0 ID=cds-WP_002850726.1;Parent=gene-HGK48_RS09030;Dbxref=GenBank:WP_002850726.1;Name=WP_002850726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000394826.1;locus_tag=HGK48_RS09030;product=hypothetical protein;protein_id=WP_002850726.1;transl_table=11 ##sequence-region NZ_JAATTN010000244.1 1 2466 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000244.1 RefSeq region 1 2466 . + . ID=NZ_JAATTN010000244.1:1..2466;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000244.1 RefSeq gene 34 1257 . + . ID=gene-HGK48_RS09035;Name=HGK48_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09035 NZ_JAATTN010000244.1 Protein Homology CDS 34 1257 . + 0 ID=cds-WP_002849322.1;Parent=gene-HGK48_RS09035;Dbxref=GenBank:WP_002849322.1;Name=WP_002849322.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849322.1;locus_tag=HGK48_RS09035;product=argininosuccinate synthase;protein_id=WP_002849322.1;transl_table=11 NZ_JAATTN010000244.1 RefSeq gene 1322 2386 . + . ID=gene-HGK48_RS09040;Name=HGK48_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09040 NZ_JAATTN010000244.1 Protein Homology CDS 1322 2386 . + 0 ID=cds-WP_024305228.1;Parent=gene-HGK48_RS09040;Dbxref=GenBank:WP_024305228.1;Name=WP_024305228.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344270.1;locus_tag=HGK48_RS09040;product=tyrosine-type recombinase/integrase;protein_id=WP_024305228.1;transl_table=11 ##sequence-region NZ_JAATTN010000245.1 1 2532 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000245.1 RefSeq region 1 2532 . + . ID=NZ_JAATTN010000245.1:1..2532;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000245.1 RefSeq gene 1 794 . + . ID=gene-HGK48_RS09045;Name=HGK48_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09045;partial=true;start_range=.,1 NZ_JAATTN010000245.1 Protein Homology CDS 1 794 . + 2 ID=cds-WP_168236873.1;Parent=gene-HGK48_RS09045;Dbxref=GenBank:WP_168236873.1;Name=WP_168236873.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731712.1;locus_tag=HGK48_RS09045;partial=true;product=sensor histidine kinase;protein_id=WP_168236873.1;start_range=.,1;transl_table=11 NZ_JAATTN010000245.1 RefSeq gene 784 1473 . + . ID=gene-HGK48_RS09050;Name=HGK48_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09050 NZ_JAATTN010000245.1 Protein Homology CDS 784 1473 . + 0 ID=cds-WP_002848133.1;Parent=gene-HGK48_RS09050;Dbxref=GenBank:WP_002848133.1;Name=WP_002848133.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848133.1;locus_tag=HGK48_RS09050;product=response regulator transcription factor;protein_id=WP_002848133.1;transl_table=11 NZ_JAATTN010000245.1 RefSeq gene 1518 1605 . - . ID=gene-HGK48_RS09055;Name=HGK48_RS09055;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS09055 NZ_JAATTN010000245.1 tRNAscan-SE tRNA 1518 1605 . - . ID=rna-HGK48_RS09055;Parent=gene-HGK48_RS09055;anticodon=(pos:complement(1569..1571));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS09055;product=tRNA-Ser NZ_JAATTN010000245.1 tRNAscan-SE exon 1518 1605 . - . ID=exon-HGK48_RS09055-1;Parent=rna-HGK48_RS09055;anticodon=(pos:complement(1569..1571));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS09055;product=tRNA-Ser NZ_JAATTN010000245.1 RefSeq gene 1884 2360 . + . ID=gene-HGK48_RS09060;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=HGK48_RS09060 NZ_JAATTN010000245.1 Protein Homology CDS 1884 2360 . + 0 ID=cds-WP_002848134.1;Parent=gene-HGK48_RS09060;Dbxref=GenBank:WP_002848134.1;Name=WP_002848134.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731713.1;locus_tag=HGK48_RS09060;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_002848134.1;transl_table=11 NZ_JAATTN010000245.1 RefSeq gene 2353 2532 . + . ID=gene-HGK48_RS09065;Name=HGK48_RS09065;end_range=2532,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09065;partial=true NZ_JAATTN010000245.1 Protein Homology CDS 2353 2532 . + 0 ID=cds-WP_168236874.1;Parent=gene-HGK48_RS09065;Dbxref=GenBank:WP_168236874.1;Name=WP_168236874.1;end_range=2532,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848135.1;locus_tag=HGK48_RS09065;partial=true;product=HP0495 family protein;protein_id=WP_168236874.1;transl_table=11 ##sequence-region NZ_JAATTN010000246.1 1 2528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000246.1 RefSeq region 1 2528 . + . ID=NZ_JAATTN010000246.1:1..2528;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000246.1 RefSeq gene 1 301 . + . ID=gene-HGK48_RS09070;Name=HGK48_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09070;partial=true;start_range=.,1 NZ_JAATTN010000246.1 Protein Homology CDS 1 301 . + 1 ID=cds-WP_206120321.1;Parent=gene-HGK48_RS09070;Dbxref=GenBank:WP_206120321.1;Name=WP_206120321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848466.1;locus_tag=HGK48_RS09070;partial=true;product=nitroreductase family protein;protein_id=WP_206120321.1;start_range=.,1;transl_table=11 NZ_JAATTN010000246.1 RefSeq gene 309 1385 . + . ID=gene-HGK48_RS09075;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=HGK48_RS09075 NZ_JAATTN010000246.1 Protein Homology CDS 309 1385 . + 0 ID=cds-WP_024305324.1;Parent=gene-HGK48_RS09075;Dbxref=GenBank:WP_024305324.1;Name=WP_024305324.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002952453.1;locus_tag=HGK48_RS09075;product=flagellar biosynthesis protein FlhB;protein_id=WP_024305324.1;transl_table=11 NZ_JAATTN010000246.1 RefSeq gene 1431 2528 . - . ID=gene-HGK48_RS09080;Name=nhaA;end_range=2528,.;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=HGK48_RS09080;partial=true NZ_JAATTN010000246.1 Protein Homology CDS 1431 2528 . - 0 ID=cds-WP_168236875.1;Parent=gene-HGK48_RS09080;Dbxref=GenBank:WP_168236875.1;Name=WP_168236875.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;end_range=2528,.;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848468.1;locus_tag=HGK48_RS09080;partial=true;product=Na+/H+ antiporter NhaA;protein_id=WP_168236875.1;transl_table=11 ##sequence-region NZ_JAATTN010000247.1 1 2438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000247.1 RefSeq region 1 2438 . + . ID=NZ_JAATTN010000247.1:1..2438;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000247.1 RefSeq gene 1 432 . + . ID=gene-HGK48_RS09085;Name=HGK48_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09085;partial=true;start_range=.,1 NZ_JAATTN010000247.1 Protein Homology CDS 1 432 . + 0 ID=cds-WP_277346444.1;Parent=gene-HGK48_RS09085;Dbxref=GenBank:WP_277346444.1;Name=WP_277346444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731938.1;locus_tag=HGK48_RS09085;partial=true;product=phosphopantothenoylcysteine decarboxylase domain-containing protein;protein_id=WP_277346444.1;start_range=.,1;transl_table=11 NZ_JAATTN010000247.1 RefSeq gene 429 1106 . + . ID=gene-HGK48_RS09090;Name=HGK48_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09090 NZ_JAATTN010000247.1 GeneMarkS-2+ CDS 429 1106 . + 0 ID=cds-WP_010392707.1;Parent=gene-HGK48_RS09090;Dbxref=GenBank:WP_010392707.1;Name=WP_010392707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09090;product=hypothetical protein;protein_id=WP_010392707.1;transl_table=11 NZ_JAATTN010000247.1 RefSeq gene 1109 1786 . + . ID=gene-HGK48_RS09095;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=HGK48_RS09095 NZ_JAATTN010000247.1 Protein Homology CDS 1109 1786 . + 0 ID=cds-WP_011731937.1;Parent=gene-HGK48_RS09095;Dbxref=GenBank:WP_011731937.1;Name=WP_011731937.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012001542.1;locus_tag=HGK48_RS09095;product=polyprenyl diphosphate synthase;protein_id=WP_011731937.1;transl_table=11 NZ_JAATTN010000247.1 RefSeq gene 1786 2438 . + . ID=gene-HGK48_RS09100;Name=HGK48_RS09100;end_range=2438,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09100;partial=true NZ_JAATTN010000247.1 Protein Homology CDS 1786 2438 . + 0 ID=cds-WP_168236876.1;Parent=gene-HGK48_RS09100;Dbxref=GenBank:WP_168236876.1;Name=WP_168236876.1;Ontology_term=GO:0004190,GO:0016020;end_range=2438,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: protein motif:HMM:NF018460.6;locus_tag=HGK48_RS09100;partial=true;product=prepilin peptidase;protein_id=WP_168236876.1;transl_table=11 ##sequence-region NZ_JAATTN010000248.1 1 2513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000248.1 RefSeq region 1 2513 . + . ID=NZ_JAATTN010000248.1:1..2513;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000248.1 RefSeq gene 78 629 . - . ID=gene-HGK48_RS09105;Name=HGK48_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09105 NZ_JAATTN010000248.1 Protein Homology CDS 78 629 . - 0 ID=cds-WP_035170847.1;Parent=gene-HGK48_RS09105;Dbxref=GenBank:WP_035170847.1;Name=WP_035170847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801292.1;locus_tag=HGK48_RS09105;product=hypothetical protein;protein_id=WP_035170847.1;transl_table=11 NZ_JAATTN010000248.1 RefSeq gene 629 1330 . - . ID=gene-HGK48_RS09110;Name=HGK48_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09110 NZ_JAATTN010000248.1 Protein Homology CDS 629 1330 . - 0 ID=cds-WP_065838980.1;Parent=gene-HGK48_RS09110;Dbxref=GenBank:WP_065838980.1;Name=WP_065838980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851014.1;locus_tag=HGK48_RS09110;product=TrbM/KikA/MpfK family conjugal transfer protein;protein_id=WP_065838980.1;transl_table=11 NZ_JAATTN010000248.1 RefSeq gene 1642 2513 . - . ID=gene-HGK48_RS09115;Name=HGK48_RS09115;end_range=2513,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09115;partial=true NZ_JAATTN010000248.1 Protein Homology CDS 1642 2513 . - 2 ID=cds-WP_168236877.1;Parent=gene-HGK48_RS09115;Dbxref=GenBank:WP_168236877.1;Name=WP_168236877.1;Ontology_term=GO:0005524,GO:0016887,GO:0016020;end_range=2513,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849955.1;locus_tag=HGK48_RS09115;partial=true;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_168236877.1;transl_table=11 ##sequence-region NZ_JAATTN010000249.1 1 2442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000249.1 RefSeq region 1 2442 . + . ID=NZ_JAATTN010000249.1:1..2442;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000249.1 RefSeq gene 1 732 . - . ID=gene-HGK48_RS09120;Name=HGK48_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09120;partial=true;start_range=.,1 NZ_JAATTN010000249.1 Protein Homology CDS 1 732 . - 0 ID=cds-WP_168236878.1;Parent=gene-HGK48_RS09120;Dbxref=GenBank:WP_168236878.1;Name=WP_168236878.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848375.1;locus_tag=HGK48_RS09120;partial=true;product=FecCD family ABC transporter permease;protein_id=WP_168236878.1;start_range=.,1;transl_table=11 NZ_JAATTN010000249.1 RefSeq gene 719 1732 . - . ID=gene-HGK48_RS09125;Name=HGK48_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09125 NZ_JAATTN010000249.1 Protein Homology CDS 719 1732 . - 0 ID=cds-WP_167497329.1;Parent=gene-HGK48_RS09125;Dbxref=GenBank:WP_167497329.1;Name=WP_167497329.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013648.6;locus_tag=HGK48_RS09125;product=ABC transporter substrate-binding protein;protein_id=WP_167497329.1;transl_table=11 NZ_JAATTN010000249.1 RefSeq gene 1725 2442 . - . ID=gene-HGK48_RS09130;Name=HGK48_RS09130;end_range=2442,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09130;partial=true NZ_JAATTN010000249.1 Protein Homology CDS 1725 2442 . - 1 ID=cds-WP_168236879.1;Parent=gene-HGK48_RS09130;Dbxref=GenBank:WP_168236879.1;Name=WP_168236879.1;Ontology_term=GO:0010181,GO:0016491,GO:0070967;end_range=2442,.;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: protein motif:HMM:NF012517.6;locus_tag=HGK48_RS09130;partial=true;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_168236879.1;transl_table=11 ##sequence-region NZ_JAATTN010000024.1 1 12297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000024.1 RefSeq region 1 12297 . + . ID=NZ_JAATTN010000024.1:1..12297;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000024.1 RefSeq gene 1 576 . - . ID=gene-HGK48_RS02310;Name=HGK48_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02310;partial=true;start_range=.,1 NZ_JAATTN010000024.1 Protein Homology CDS 1 576 . - 0 ID=cds-WP_168236660.1;Parent=gene-HGK48_RS02310;Dbxref=GenBank:WP_168236660.1;Name=WP_168236660.1;Ontology_term=GO:0120010,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=intermembrane phospholipid transfer|0120010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848521.1;locus_tag=HGK48_RS02310;partial=true;product=MlaA family lipoprotein;protein_id=WP_168236660.1;start_range=.,1;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 740 1531 . + . ID=gene-HGK48_RS02315;Name=HGK48_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02315 NZ_JAATTN010000024.1 Protein Homology CDS 740 1531 . + 0 ID=cds-WP_002848519.1;Parent=gene-HGK48_RS02315;Dbxref=GenBank:WP_002848519.1;Name=WP_002848519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731787.1;locus_tag=HGK48_RS02315;product=TOBE domain-containing protein;protein_id=WP_002848519.1;transl_table=11 NZ_JAATTN010000024.1 RefSeq pseudogene 1674 2413 . + . ID=gene-HGK48_RS02320;Name=modA;gbkey=Gene;gene=modA;gene_biotype=pseudogene;locus_tag=HGK48_RS02320;pseudo=true NZ_JAATTN010000024.1 Protein Homology CDS 1674 2413 . + 0 ID=cds-HGK48_RS02320;Parent=gene-HGK48_RS02320;Note=frameshifted;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848517.1;locus_tag=HGK48_RS02320;product=molybdate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 2413 2787 . + . ID=gene-HGK48_RS02325;Name=HGK48_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02325 NZ_JAATTN010000024.1 GeneMarkS-2+ CDS 2413 2787 . + 0 ID=cds-WP_010400138.1;Parent=gene-HGK48_RS02325;Dbxref=GenBank:WP_010400138.1;Name=WP_010400138.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02325;product=hypothetical protein;protein_id=WP_010400138.1;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 2784 3635 . + . ID=gene-HGK48_RS02330;Name=HGK48_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02330 NZ_JAATTN010000024.1 Protein Homology CDS 2784 3635 . + 0 ID=cds-WP_002848514.1;Parent=gene-HGK48_RS02330;Dbxref=GenBank:WP_002848514.1;Name=WP_002848514.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848514.1;locus_tag=HGK48_RS02330;product=ABC transporter ATP-binding protein;protein_id=WP_002848514.1;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 3632 4297 . + . ID=gene-HGK48_RS02335;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=HGK48_RS02335 NZ_JAATTN010000024.1 Protein Homology CDS 3632 4297 . + 0 ID=cds-WP_002848512.1;Parent=gene-HGK48_RS02335;Dbxref=GenBank:WP_002848512.1;Name=WP_002848512.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848512.1;locus_tag=HGK48_RS02335;product=molybdate ABC transporter permease subunit;protein_id=WP_002848512.1;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 4323 4892 . + . ID=gene-HGK48_RS02340;Name=HGK48_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02340 NZ_JAATTN010000024.1 GeneMarkS-2+ CDS 4323 4892 . + 0 ID=cds-WP_002848509.1;Parent=gene-HGK48_RS02340;Dbxref=GenBank:WP_002848509.1;Name=WP_002848509.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02340;product=hypothetical protein;protein_id=WP_002848509.1;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 4932 5879 . - . ID=gene-HGK48_RS02345;Name=HGK48_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02345 NZ_JAATTN010000024.1 GeneMarkS-2+ CDS 4932 5879 . - 0 ID=cds-WP_002848507.1;Parent=gene-HGK48_RS02345;Dbxref=GenBank:WP_002848507.1;Name=WP_002848507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02345;product=hypothetical protein;protein_id=WP_002848507.1;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 5876 6181 . - . ID=gene-HGK48_RS02350;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=HGK48_RS02350 NZ_JAATTN010000024.1 Protein Homology CDS 5876 6181 . - 0 ID=cds-WP_002848505.1;Parent=gene-HGK48_RS02350;Dbxref=GenBank:WP_002848505.1;Name=WP_002848505.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009425;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum basal body|0009425||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848505.1;locus_tag=HGK48_RS02350;product=flagellar motor switch protein FliN;protein_id=WP_002848505.1;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 6178 6597 . - . ID=gene-HGK48_RS02355;Name=HGK48_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02355 NZ_JAATTN010000024.1 Protein Homology CDS 6178 6597 . - 0 ID=cds-WP_002848503.1;Parent=gene-HGK48_RS02355;Dbxref=GenBank:WP_002848503.1;Name=WP_002848503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848503.1;locus_tag=HGK48_RS02355;product=hypothetical protein;protein_id=WP_002848503.1;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 6746 7495 . - . ID=gene-HGK48_RS02360;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=HGK48_RS02360 NZ_JAATTN010000024.1 Protein Homology CDS 6746 7495 . - 0 ID=cds-WP_002848498.1;Parent=gene-HGK48_RS02360;Dbxref=GenBank:WP_002848498.1;Name=WP_002848498.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848498.1;locus_tag=HGK48_RS02360;product=tryptophan synthase subunit alpha;protein_id=WP_002848498.1;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 7488 8669 . - . ID=gene-HGK48_RS02365;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=HGK48_RS02365 NZ_JAATTN010000024.1 Protein Homology CDS 7488 8669 . - 0 ID=cds-WP_002848496.1;Parent=gene-HGK48_RS02365;Dbxref=GenBank:WP_002848496.1;Name=WP_002848496.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002952997.1;locus_tag=HGK48_RS02365;product=tryptophan synthase subunit beta;protein_id=WP_002848496.1;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 8666 9271 . - . ID=gene-HGK48_RS02370;Name=HGK48_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02370 NZ_JAATTN010000024.1 Protein Homology CDS 8666 9271 . - 0 ID=cds-WP_002848494.1;Parent=gene-HGK48_RS02370;Dbxref=GenBank:WP_002848494.1;Name=WP_002848494.1;Ontology_term=GO:0000162,GO:0004640;gbkey=CDS;go_function=phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018136060.1;locus_tag=HGK48_RS02370;product=phosphoribosylanthranilate isomerase;protein_id=WP_002848494.1;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 9268 10863 . - . ID=gene-HGK48_RS02375;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=HGK48_RS02375 NZ_JAATTN010000024.1 Protein Homology CDS 9268 10863 . - 0 ID=cds-WP_002848492.1;Parent=gene-HGK48_RS02375;Dbxref=GenBank:WP_002848492.1;Name=WP_002848492.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848492.1;locus_tag=HGK48_RS02375;product=anthranilate phosphoribosyltransferase;protein_id=WP_002848492.1;transl_table=11 NZ_JAATTN010000024.1 RefSeq gene 10860 12119 . - . ID=gene-HGK48_RS02380;Name=HGK48_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02380 NZ_JAATTN010000024.1 Protein Homology CDS 10860 12119 . - 0 ID=cds-WP_024305326.1;Parent=gene-HGK48_RS02380;Dbxref=GenBank:WP_024305326.1;Name=WP_024305326.1;Ontology_term=GO:0009058,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731784.1;locus_tag=HGK48_RS02380;product=anthranilate synthase component I family protein;protein_id=WP_024305326.1;transl_table=11 ##sequence-region NZ_JAATTN010000250.1 1 2441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000250.1 RefSeq region 1 2441 . + . ID=NZ_JAATTN010000250.1:1..2441;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000250.1 RefSeq gene 1 129 . - . ID=gene-HGK48_RS09135;Name=HGK48_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09135;partial=true;start_range=.,1 NZ_JAATTN010000250.1 Protein Homology CDS 1 129 . - 0 ID=cds-WP_457550920.1;Parent=gene-HGK48_RS09135;Dbxref=GenBank:WP_457550920.1;Name=WP_457550920.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012286.6;locus_tag=HGK48_RS09135;partial=true;product=lactate/malate family dehydrogenase;protein_id=WP_457550920.1;start_range=.,1;transl_table=11 NZ_JAATTN010000250.1 RefSeq gene 113 2305 . - . ID=gene-HGK48_RS09140;Name=HGK48_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09140 NZ_JAATTN010000250.1 Protein Homology CDS 113 2305 . - 0 ID=cds-WP_011731999.1;Parent=gene-HGK48_RS09140;Dbxref=GenBank:WP_011731999.1;Name=WP_011731999.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731999.1;locus_tag=HGK48_RS09140;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_011731999.1;transl_table=11 ##sequence-region NZ_JAATTN010000251.1 1 2440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000251.1 RefSeq region 1 2440 . + . ID=NZ_JAATTN010000251.1:1..2440;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000251.1 RefSeq gene 120 386 . + . ID=gene-HGK48_RS09145;Name=HGK48_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09145 NZ_JAATTN010000251.1 Protein Homology CDS 120 386 . + 0 ID=cds-WP_034959644.1;Parent=gene-HGK48_RS09145;Dbxref=GenBank:WP_034959644.1;Name=WP_034959644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011992178.1;locus_tag=HGK48_RS09145;product=hypothetical protein;protein_id=WP_034959644.1;transl_table=11 NZ_JAATTN010000251.1 RefSeq gene 383 784 . + . ID=gene-HGK48_RS09150;Name=HGK48_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09150 NZ_JAATTN010000251.1 GeneMarkS-2+ CDS 383 784 . + 0 ID=cds-WP_002849301.1;Parent=gene-HGK48_RS09150;Dbxref=GenBank:WP_002849301.1;Name=WP_002849301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09150;product=hypothetical protein;protein_id=WP_002849301.1;transl_table=11 NZ_JAATTN010000251.1 RefSeq gene 820 1908 . - . ID=gene-HGK48_RS09155;Name=HGK48_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09155 NZ_JAATTN010000251.1 Protein Homology CDS 820 1908 . - 0 ID=cds-WP_002849300.1;Parent=gene-HGK48_RS09155;Dbxref=GenBank:WP_002849300.1;Name=WP_002849300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731971.1;locus_tag=HGK48_RS09155;product=DNA adenine methylase;protein_id=WP_002849300.1;transl_table=11 NZ_JAATTN010000251.1 RefSeq pseudogene 1905 2440 . - . ID=gene-HGK48_RS09160;Name=HGK48_RS09160;end_range=2440,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09160;partial=true;pseudo=true NZ_JAATTN010000251.1 Protein Homology CDS 1905 2440 . - 2 ID=cds-HGK48_RS09160;Parent=gene-HGK48_RS09160;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2440,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731970.1;locus_tag=HGK48_RS09160;partial=true;product=glycine--tRNA ligase subunit beta;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000252.1 1 2399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000252.1 RefSeq region 1 2399 . + . ID=NZ_JAATTN010000252.1:1..2399;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000252.1 RefSeq gene 237 2399 . - . ID=gene-HGK48_RS09165;Name=HGK48_RS09165;end_range=2399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09165;partial=true NZ_JAATTN010000252.1 GeneMarkS-2+ CDS 237 2399 . - 0 ID=cds-WP_168236881.1;Parent=gene-HGK48_RS09165;Dbxref=GenBank:WP_168236881.1;Name=WP_168236881.1;end_range=2399,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09165;partial=true;product=beta strand repeat-containing protein;protein_id=WP_168236881.1;transl_table=11 ##sequence-region NZ_JAATTN010000253.1 1 2391 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000253.1 RefSeq region 1 2391 . + . ID=NZ_JAATTN010000253.1:1..2391;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000253.1 RefSeq gene 81 557 . - . ID=gene-HGK48_RS09170;Name=HGK48_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09170 NZ_JAATTN010000253.1 Protein Homology CDS 81 557 . - 0 ID=cds-WP_002849585.1;Parent=gene-HGK48_RS09170;Dbxref=GenBank:WP_002849585.1;Name=WP_002849585.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025716.6;locus_tag=HGK48_RS09170;product=DUF4405 domain-containing protein;protein_id=WP_002849585.1;transl_table=11 NZ_JAATTN010000253.1 RefSeq gene 667 1281 . + . ID=gene-HGK48_RS09175;Name=HGK48_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09175 NZ_JAATTN010000253.1 Protein Homology CDS 667 1281 . + 0 ID=cds-WP_002849584.1;Parent=gene-HGK48_RS09175;Dbxref=GenBank:WP_002849584.1;Name=WP_002849584.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: protein motif:HMM:NF013933.6;locus_tag=HGK48_RS09175;product=LysE family translocator;protein_id=WP_002849584.1;transl_table=11 NZ_JAATTN010000253.1 RefSeq gene 1290 1889 . + . ID=gene-HGK48_RS09180;Name=HGK48_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09180 NZ_JAATTN010000253.1 Protein Homology CDS 1290 1889 . + 0 ID=cds-WP_002849582.1;Parent=gene-HGK48_RS09180;Dbxref=GenBank:WP_002849582.1;Name=WP_002849582.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: protein motif:HMM:NF013933.6;locus_tag=HGK48_RS09180;product=LysE family translocator;protein_id=WP_002849582.1;transl_table=11 NZ_JAATTN010000253.1 RefSeq gene 1932 2391 . + . ID=gene-HGK48_RS09185;Name=HGK48_RS09185;end_range=2391,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09185;partial=true NZ_JAATTN010000253.1 Protein Homology CDS 1932 2391 . + 0 ID=cds-WP_168236882.1;Parent=gene-HGK48_RS09185;Dbxref=GenBank:WP_168236882.1;Name=WP_168236882.1;Ontology_term=GO:0009098,GO:0003861;end_range=2391,.;gbkey=CDS;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732045.1;locus_tag=HGK48_RS09185;partial=true;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_168236882.1;transl_table=11 ##sequence-region NZ_JAATTN010000254.1 1 2386 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000254.1 RefSeq region 1 2386 . + . ID=NZ_JAATTN010000254.1:1..2386;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000254.1 RefSeq gene 1 738 . - . ID=gene-HGK48_RS09190;Name=HGK48_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09190;partial=true;start_range=.,1 NZ_JAATTN010000254.1 Protein Homology CDS 1 738 . - 0 ID=cds-WP_394352684.1;Parent=gene-HGK48_RS09190;Dbxref=GenBank:WP_394352684.1;Name=WP_394352684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047080.2;locus_tag=HGK48_RS09190;partial=true;product=phage integrase central domain-containing protein;protein_id=WP_394352684.1;start_range=.,1;transl_table=11 NZ_JAATTN010000254.1 RefSeq gene 929 1005 . - . ID=gene-HGK48_RS09195;Name=HGK48_RS09195;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS09195 NZ_JAATTN010000254.1 tRNAscan-SE tRNA 929 1005 . - . ID=rna-HGK48_RS09195;Parent=gene-HGK48_RS09195;anticodon=(pos:complement(969..971));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS09195;product=tRNA-Ile NZ_JAATTN010000254.1 tRNAscan-SE exon 929 1005 . - . ID=exon-HGK48_RS09195-1;Parent=rna-HGK48_RS09195;anticodon=(pos:complement(969..971));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS09195;product=tRNA-Ile NZ_JAATTN010000254.1 RefSeq pseudogene 1166 2386 . - . ID=gene-HGK48_RS09200;Name=HGK48_RS09200;end_range=2386,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09200;partial=true;pseudo=true NZ_JAATTN010000254.1 Protein Homology CDS 1166 2386 . - 2 ID=cds-HGK48_RS09200;Parent=gene-HGK48_RS09200;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=2386,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732130.1;locus_tag=HGK48_RS09200;partial=true;product=sodium/proline symporter;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000255.1 1 2362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000255.1 RefSeq region 1 2362 . + . ID=NZ_JAATTN010000255.1:1..2362;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000255.1 RefSeq gene 103 261 . - . ID=gene-HGK48_RS09205;Name=HGK48_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09205 NZ_JAATTN010000255.1 GeneMarkS-2+ CDS 103 261 . - 0 ID=cds-WP_010404305.1;Parent=gene-HGK48_RS09205;Dbxref=GenBank:WP_010404305.1;Name=WP_010404305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09205;product=hypothetical protein;protein_id=WP_010404305.1;transl_table=11 NZ_JAATTN010000255.1 RefSeq gene 317 730 . - . ID=gene-HGK48_RS09210;Name=HGK48_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09210 NZ_JAATTN010000255.1 Protein Homology CDS 317 730 . - 0 ID=cds-WP_168236883.1;Parent=gene-HGK48_RS09210;Dbxref=GenBank:WP_168236883.1;Name=WP_168236883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850347.1;locus_tag=HGK48_RS09210;product=hypothetical protein;protein_id=WP_168236883.1;transl_table=11 NZ_JAATTN010000255.1 RefSeq gene 808 1152 . - . ID=gene-HGK48_RS09215;Name=HGK48_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09215 NZ_JAATTN010000255.1 Protein Homology CDS 808 1152 . - 0 ID=cds-WP_081305023.1;Parent=gene-HGK48_RS09215;Dbxref=GenBank:WP_081305023.1;Name=WP_081305023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016647486.1;locus_tag=HGK48_RS09215;product=DUF7768 domain-containing protein;protein_id=WP_081305023.1;transl_table=11 NZ_JAATTN010000255.1 RefSeq gene 1201 2154 . - . ID=gene-HGK48_RS09220;Name=HGK48_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09220 NZ_JAATTN010000255.1 Protein Homology CDS 1201 2154 . - 0 ID=cds-WP_025370434.1;Parent=gene-HGK48_RS09220;Dbxref=GenBank:WP_025370434.1;Name=WP_025370434.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF017437.6;locus_tag=HGK48_RS09220;product=AAA family ATPase;protein_id=WP_025370434.1;transl_table=11 ##sequence-region NZ_JAATTN010000256.1 1 2348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000256.1 RefSeq region 1 2348 . + . ID=NZ_JAATTN010000256.1:1..2348;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000256.1 RefSeq gene 1 250 . - . ID=gene-HGK48_RS09225;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=HGK48_RS09225;partial=true;start_range=.,1 NZ_JAATTN010000256.1 Protein Homology CDS 1 250 . - 0 ID=cds-WP_168236884.1;Parent=gene-HGK48_RS09225;Dbxref=GenBank:WP_168236884.1;Name=WP_168236884.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012108442.1;locus_tag=HGK48_RS09225;partial=true;product=co-chaperone GroES;protein_id=WP_168236884.1;start_range=.,1;transl_table=11 NZ_JAATTN010000256.1 RefSeq gene 467 2348 . + . ID=gene-HGK48_RS09230;Name=HGK48_RS09230;end_range=2348,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09230;partial=true NZ_JAATTN010000256.1 GeneMarkS-2+ CDS 467 2348 . + 0 ID=cds-WP_168236885.1;Parent=gene-HGK48_RS09230;Dbxref=GenBank:WP_168236885.1;Name=WP_168236885.1;end_range=2348,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09230;partial=true;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_168236885.1;transl_table=11 ##sequence-region NZ_JAATTN010000257.1 1 2331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000257.1 RefSeq region 1 2331 . + . ID=NZ_JAATTN010000257.1:1..2331;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000257.1 RefSeq gene 2 1015 . + . ID=gene-HGK48_RS09235;Name=HGK48_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09235 NZ_JAATTN010000257.1 Protein Homology CDS 2 1015 . + 0 ID=cds-WP_338153893.1;Parent=gene-HGK48_RS09235;Dbxref=GenBank:WP_338153893.1;Name=WP_338153893.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849374.1;locus_tag=HGK48_RS09235;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_338153893.1;transl_table=11 NZ_JAATTN010000257.1 RefSeq gene 1034 2206 . + . ID=gene-HGK48_RS09240;Name=HGK48_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09240 NZ_JAATTN010000257.1 Protein Homology CDS 1034 2206 . + 0 ID=cds-WP_240944839.1;Parent=gene-HGK48_RS09240;Dbxref=GenBank:WP_240944839.1;Name=WP_240944839.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019335.6;locus_tag=HGK48_RS09240;product=TonB-dependent siderophore receptor;protein_id=WP_240944839.1;transl_table=11 ##sequence-region NZ_JAATTN010000258.1 1 2324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000258.1 RefSeq region 1 2324 . + . ID=NZ_JAATTN010000258.1:1..2324;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000258.1 RefSeq gene 266 691 . + . ID=gene-HGK48_RS09245;Name=HGK48_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09245 NZ_JAATTN010000258.1 Protein Homology CDS 266 691 . + 0 ID=cds-WP_002848681.1;Parent=gene-HGK48_RS09245;Dbxref=GenBank:WP_002848681.1;Name=WP_002848681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731826.1;locus_tag=HGK48_RS09245;product=DUF1924 domain-containing protein;protein_id=WP_002848681.1;transl_table=11 NZ_JAATTN010000258.1 RefSeq gene 701 1207 . + . ID=gene-HGK48_RS09250;Name=HGK48_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09250 NZ_JAATTN010000258.1 Protein Homology CDS 701 1207 . + 0 ID=cds-WP_002848680.1;Parent=gene-HGK48_RS09250;Dbxref=GenBank:WP_002848680.1;Name=WP_002848680.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021165.6;locus_tag=HGK48_RS09250;product=diheme cytochrome c;protein_id=WP_002848680.1;transl_table=11 NZ_JAATTN010000258.1 RefSeq gene 1200 2297 . + . ID=gene-HGK48_RS11470;Name=HGK48_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11470 NZ_JAATTN010000258.1 Protein Homology CDS 1200 2297 . + 0 ID=cds-WP_168236887.1;Parent=gene-HGK48_RS11470;Dbxref=GenBank:WP_168236887.1;Name=WP_168236887.1;Ontology_term=GO:0009055,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: protein motif:HMM:NF013460.7;locus_tag=HGK48_RS11470;product=cytochrome b/b6 domain-containing protein;protein_id=WP_168236887.1;transl_table=11 ##sequence-region NZ_JAATTN010000259.1 1 2324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000259.1 RefSeq region 1 2324 . + . ID=NZ_JAATTN010000259.1:1..2324;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000259.1 RefSeq gene 39 1676 . + . ID=gene-HGK48_RS09260;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=HGK48_RS09260 NZ_JAATTN010000259.1 Protein Homology CDS 39 1676 . + 0 ID=cds-WP_011731919.1;Parent=gene-HGK48_RS09260;Dbxref=GenBank:WP_011731919.1;Name=WP_011731919.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344612.1;locus_tag=HGK48_RS09260;product=chaperonin GroEL;protein_id=WP_011731919.1;transl_table=11 NZ_JAATTN010000259.1 RefSeq gene 1834 2324 . + . ID=gene-HGK48_RS09265;Name=HGK48_RS09265;end_range=2324,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09265;partial=true NZ_JAATTN010000259.1 Protein Homology CDS 1834 2324 . + 0 ID=cds-WP_206120322.1;Parent=gene-HGK48_RS09265;Dbxref=GenBank:WP_206120322.1;Name=WP_206120322.1;Ontology_term=GO:0006783,GO:0004325;end_range=2324,.;gbkey=CDS;go_function=ferrochelatase activity|0004325||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849117.1;locus_tag=HGK48_RS09265;partial=true;product=ferrochelatase;protein_id=WP_206120322.1;transl_table=11 ##sequence-region NZ_JAATTN010000025.1 1 12177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000025.1 RefSeq region 1 12177 . + . ID=NZ_JAATTN010000025.1:1..12177;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000025.1 RefSeq gene 1 773 . - . ID=gene-HGK48_RS02385;Name=HGK48_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02385;partial=true;start_range=.,1 NZ_JAATTN010000025.1 Protein Homology CDS 1 773 . - 0 ID=cds-WP_168236661.1;Parent=gene-HGK48_RS02385;Dbxref=GenBank:WP_168236661.1;Name=WP_168236661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848839.1;locus_tag=HGK48_RS02385;partial=true;product=Rnase Y domain-containing protein;protein_id=WP_168236661.1;start_range=.,1;transl_table=11 NZ_JAATTN010000025.1 RefSeq gene 706 1335 . - . ID=gene-HGK48_RS02390;Name=HGK48_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02390 NZ_JAATTN010000025.1 Protein Homology CDS 706 1335 . - 0 ID=cds-WP_011731847.1;Parent=gene-HGK48_RS02390;Dbxref=GenBank:WP_011731847.1;Name=WP_011731847.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848828.1;locus_tag=HGK48_RS02390;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_011731847.1;transl_table=11 NZ_JAATTN010000025.1 RefSeq gene 1388 1942 . + . ID=gene-HGK48_RS02395;Name=HGK48_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02395 NZ_JAATTN010000025.1 Protein Homology CDS 1388 1942 . + 0 ID=cds-WP_002848826.1;Parent=gene-HGK48_RS02395;Dbxref=GenBank:WP_002848826.1;Name=WP_002848826.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848826.1;locus_tag=HGK48_RS02395;product=TlpA family protein disulfide reductase;protein_id=WP_002848826.1;transl_table=11 NZ_JAATTN010000025.1 RefSeq gene 1942 2811 . + . ID=gene-HGK48_RS02400;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=HGK48_RS02400 NZ_JAATTN010000025.1 Protein Homology CDS 1942 2811 . + 0 ID=cds-WP_002848824.1;Parent=gene-HGK48_RS02400;Dbxref=GenBank:WP_002848824.1;Name=WP_002848824.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848824.1;locus_tag=HGK48_RS02400;product=signal recognition particle-docking protein FtsY;protein_id=WP_002848824.1;transl_table=11 NZ_JAATTN010000025.1 RefSeq gene 2811 4151 . + . ID=gene-HGK48_RS02405;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=HGK48_RS02405 NZ_JAATTN010000025.1 Protein Homology CDS 2811 4151 . + 0 ID=cds-WP_002848822.1;Parent=gene-HGK48_RS02405;Dbxref=GenBank:WP_002848822.1;Name=WP_002848822.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002831854.1;locus_tag=HGK48_RS02405;product=DNA repair protein RadA;protein_id=WP_002848822.1;transl_table=11 NZ_JAATTN010000025.1 RefSeq gene 4155 5468 . - . ID=gene-HGK48_RS02410;Name=HGK48_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02410 NZ_JAATTN010000025.1 Protein Homology CDS 4155 5468 . - 0 ID=cds-WP_024305240.1;Parent=gene-HGK48_RS02410;Dbxref=GenBank:WP_024305240.1;Name=WP_024305240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731846.1;locus_tag=HGK48_RS02410;product=sugar transferase;protein_id=WP_024305240.1;transl_table=11 NZ_JAATTN010000025.1 RefSeq gene 5440 6555 . - . ID=gene-HGK48_RS02415;Name=HGK48_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02415 NZ_JAATTN010000025.1 Protein Homology CDS 5440 6555 . - 0 ID=cds-WP_024305241.1;Parent=gene-HGK48_RS02415;Dbxref=GenBank:WP_024305241.1;Name=WP_024305241.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848820.1;locus_tag=HGK48_RS02415;product=glycosyltransferase;protein_id=WP_024305241.1;transl_table=11 NZ_JAATTN010000025.1 RefSeq gene 6742 7506 . + . ID=gene-HGK48_RS02420;Name=HGK48_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02420 NZ_JAATTN010000025.1 Protein Homology CDS 6742 7506 . + 0 ID=cds-WP_011731845.1;Parent=gene-HGK48_RS02420;Dbxref=GenBank:WP_011731845.1;Name=WP_011731845.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731845.1;locus_tag=HGK48_RS02420;product=ABC transporter permease;protein_id=WP_011731845.1;transl_table=11 NZ_JAATTN010000025.1 RefSeq gene 7503 8687 . + . ID=gene-HGK48_RS02425;Name=HGK48_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02425 NZ_JAATTN010000025.1 Protein Homology CDS 7503 8687 . + 0 ID=cds-WP_002848818.1;Parent=gene-HGK48_RS02425;Dbxref=GenBank:WP_002848818.1;Name=WP_002848818.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848818.1;locus_tag=HGK48_RS02425;product=ABC transporter ATP-binding protein;protein_id=WP_002848818.1;transl_table=11 NZ_JAATTN010000025.1 RefSeq gene 8687 8872 . + . ID=gene-HGK48_RS02430;Name=HGK48_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02430 NZ_JAATTN010000025.1 GeneMarkS-2+ CDS 8687 8872 . + 0 ID=cds-WP_002848817.1;Parent=gene-HGK48_RS02430;Dbxref=GenBank:WP_002848817.1;Name=WP_002848817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02430;product=hypothetical protein;protein_id=WP_002848817.1;transl_table=11 NZ_JAATTN010000025.1 RefSeq gene 8875 11106 . + . ID=gene-HGK48_RS02435;Name=HGK48_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02435 NZ_JAATTN010000025.1 Protein Homology CDS 8875 11106 . + 0 ID=cds-WP_011731844.1;Parent=gene-HGK48_RS02435;Dbxref=GenBank:WP_011731844.1;Name=WP_011731844.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF025072.6;locus_tag=HGK48_RS02435;product=glycosyltransferase;protein_id=WP_011731844.1;transl_table=11 NZ_JAATTN010000025.1 RefSeq gene 11103 12177 . + . ID=gene-HGK48_RS02440;Name=HGK48_RS02440;end_range=12177,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02440;partial=true NZ_JAATTN010000025.1 Protein Homology CDS 11103 12177 . + 0 ID=cds-WP_168236662.1;Parent=gene-HGK48_RS02440;Dbxref=GenBank:WP_168236662.1;Name=WP_168236662.1;Ontology_term=GO:0009101,GO:0016757;end_range=12177,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: protein motif:HMM:NF024831.6;locus_tag=HGK48_RS02440;partial=true;product=glycosyltransferase family 4 protein;protein_id=WP_168236662.1;transl_table=11 ##sequence-region NZ_JAATTN010000260.1 1 2322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000260.1 RefSeq region 1 2322 . + . ID=NZ_JAATTN010000260.1:1..2322;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000260.1 RefSeq gene 1 1359 . - . ID=gene-HGK48_RS09270;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=HGK48_RS09270;partial=true;start_range=.,1 NZ_JAATTN010000260.1 Protein Homology CDS 1 1359 . - 0 ID=cds-WP_168236888.1;Parent=gene-HGK48_RS09270;Dbxref=GenBank:WP_168236888.1;Name=WP_168236888.1;gbkey=CDS;gene=yidC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004319430.1;locus_tag=HGK48_RS09270;partial=true;product=membrane protein insertase YidC;protein_id=WP_168236888.1;start_range=.,1;transl_table=11 NZ_JAATTN010000260.1 RefSeq gene 1359 1697 . - . ID=gene-HGK48_RS09275;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=HGK48_RS09275 NZ_JAATTN010000260.1 Protein Homology CDS 1359 1697 . - 0 ID=cds-WP_024305457.1;Parent=gene-HGK48_RS09275;Dbxref=GenBank:WP_024305457.1;Name=WP_024305457.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009293672.1;locus_tag=HGK48_RS09275;product=membrane protein insertion efficiency factor YidD;protein_id=WP_024305457.1;transl_table=11 NZ_JAATTN010000260.1 RefSeq gene 1694 2020 . - . ID=gene-HGK48_RS09280;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=HGK48_RS09280 NZ_JAATTN010000260.1 Protein Homology CDS 1694 2020 . - 0 ID=cds-WP_029662475.1;Parent=gene-HGK48_RS09280;Dbxref=GenBank:WP_029662475.1;Name=WP_029662475.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002860715.1;locus_tag=HGK48_RS09280;product=ribonuclease P protein component;protein_id=WP_029662475.1;transl_table=11 NZ_JAATTN010000260.1 RefSeq gene 2047 2181 . - . ID=gene-HGK48_RS09285;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=HGK48_RS09285 NZ_JAATTN010000260.1 Protein Homology CDS 2047 2181 . - 0 ID=cds-WP_002848923.1;Parent=gene-HGK48_RS09285;Dbxref=GenBank:WP_002848923.1;Name=WP_002848923.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002940373.1;locus_tag=HGK48_RS09285;product=50S ribosomal protein L34;protein_id=WP_002848923.1;transl_table=11 ##sequence-region NZ_JAATTN010000261.1 1 2243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000261.1 RefSeq region 1 2243 . + . ID=NZ_JAATTN010000261.1:1..2243;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000261.1 RefSeq gene 159 1025 . + . ID=gene-HGK48_RS09290;Name=HGK48_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09290 NZ_JAATTN010000261.1 Protein Homology CDS 159 1025 . + 0 ID=cds-WP_002848231.1;Parent=gene-HGK48_RS09290;Dbxref=GenBank:WP_002848231.1;Name=WP_002848231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848231.1;locus_tag=HGK48_RS09290;product=menaquinone biosynthesis family protein;protein_id=WP_002848231.1;transl_table=11 NZ_JAATTN010000261.1 RefSeq gene 1025 1291 . + . ID=gene-HGK48_RS09295;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=HGK48_RS09295 NZ_JAATTN010000261.1 Protein Homology CDS 1025 1291 . + 0 ID=cds-WP_002848233.1;Parent=gene-HGK48_RS09295;Dbxref=GenBank:WP_002848233.1;Name=WP_002848233.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009650949.1;locus_tag=HGK48_RS09295;product=flagellar biosynthesis protein FliQ;protein_id=WP_002848233.1;transl_table=11 NZ_JAATTN010000261.1 RefSeq gene 1288 2049 . + . ID=gene-HGK48_RS09300;Name=HGK48_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09300 NZ_JAATTN010000261.1 Protein Homology CDS 1288 2049 . + 0 ID=cds-WP_002848234.1;Parent=gene-HGK48_RS09300;Dbxref=GenBank:WP_002848234.1;Name=WP_002848234.1;Ontology_term=GO:0008762,GO:0050660;gbkey=CDS;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848234.1;locus_tag=HGK48_RS09300;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_002848234.1;transl_table=11 NZ_JAATTN010000261.1 RefSeq gene 2170 2241 . + . ID=gene-HGK48_RS09305;Name=HGK48_RS09305;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS09305 NZ_JAATTN010000261.1 tRNAscan-SE tRNA 2170 2241 . + . ID=rna-HGK48_RS09305;Parent=gene-HGK48_RS09305;anticodon=(pos:2202..2204);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS09305;product=tRNA-Asn NZ_JAATTN010000261.1 tRNAscan-SE exon 2170 2241 . + . ID=exon-HGK48_RS09305-1;Parent=rna-HGK48_RS09305;anticodon=(pos:2202..2204);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS09305;product=tRNA-Asn ##sequence-region NZ_JAATTN010000262.1 1 2242 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000262.1 RefSeq region 1 2242 . + . ID=NZ_JAATTN010000262.1:1..2242;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000262.1 RefSeq pseudogene 1 294 . - . ID=gene-HGK48_RS09310;Name=HGK48_RS09310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09310;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000262.1 GeneMarkS-2+ CDS 1 294 . - 0 ID=cds-HGK48_RS09310;Parent=gene-HGK48_RS09310;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09310;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000262.1 RefSeq gene 934 1389 . - . ID=gene-HGK48_RS09315;Name=HGK48_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09315 NZ_JAATTN010000262.1 GeneMarkS-2+ CDS 934 1389 . - 0 ID=cds-WP_002850084.1;Parent=gene-HGK48_RS09315;Dbxref=GenBank:WP_002850084.1;Name=WP_002850084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09315;product=hypothetical protein;protein_id=WP_002850084.1;transl_table=11 NZ_JAATTN010000262.1 RefSeq gene 1910 2182 . - . ID=gene-HGK48_RS09320;Name=HGK48_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09320 NZ_JAATTN010000262.1 GeneMarkS-2+ CDS 1910 2182 . - 0 ID=cds-WP_167497343.1;Parent=gene-HGK48_RS09320;Dbxref=GenBank:WP_167497343.1;Name=WP_167497343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09320;product=hypothetical protein;protein_id=WP_167497343.1;transl_table=11 ##sequence-region NZ_JAATTN010000263.1 1 2311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000263.1 RefSeq region 1 2311 . + . ID=NZ_JAATTN010000263.1:1..2311;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000263.1 RefSeq gene 158 1183 . + . ID=gene-HGK48_RS09325;Name=HGK48_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09325 NZ_JAATTN010000263.1 Protein Homology CDS 158 1183 . + 0 ID=cds-WP_002849169.1;Parent=gene-HGK48_RS09325;Dbxref=GenBank:WP_002849169.1;Name=WP_002849169.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849169.1;locus_tag=HGK48_RS09325;product=LptF/LptG family permease;protein_id=WP_002849169.1;transl_table=11 NZ_JAATTN010000263.1 RefSeq gene 1180 1956 . + . ID=gene-HGK48_RS09330;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=HGK48_RS09330 NZ_JAATTN010000263.1 Protein Homology CDS 1180 1956 . + 0 ID=cds-WP_002849168.1;Parent=gene-HGK48_RS09330;Dbxref=GenBank:WP_002849168.1;Name=WP_002849168.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849168.1;locus_tag=HGK48_RS09330;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_002849168.1;transl_table=11 NZ_JAATTN010000263.1 RefSeq pseudogene 2104 2311 . - . ID=gene-HGK48_RS09335;Name=HGK48_RS09335;end_range=2311,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09335;partial=true;pseudo=true NZ_JAATTN010000263.1 Protein Homology CDS 2104 2311 . - 1 ID=cds-HGK48_RS09335;Parent=gene-HGK48_RS09335;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2311,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002781941.1;locus_tag=HGK48_RS09335;partial=true;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000264.1 1 2306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000264.1 RefSeq region 1 2306 . + . ID=NZ_JAATTN010000264.1:1..2306;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000264.1 RefSeq gene 194 1624 . - . ID=gene-HGK48_RS09340;Name=HGK48_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09340 NZ_JAATTN010000264.1 Protein Homology CDS 194 1624 . - 0 ID=cds-WP_002849436.1;Parent=gene-HGK48_RS09340;Dbxref=GenBank:WP_002849436.1;Name=WP_002849436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732001.1;locus_tag=HGK48_RS09340;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_002849436.1;transl_table=11 NZ_JAATTN010000264.1 RefSeq pseudogene 1744 2306 . - . ID=gene-HGK48_RS09345;Name=HGK48_RS09345;end_range=2306,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09345;partial=true;pseudo=true NZ_JAATTN010000264.1 Protein Homology CDS 1744 2306 . - 2 ID=cds-HGK48_RS09345;Parent=gene-HGK48_RS09345;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2306,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849437.1;locus_tag=HGK48_RS09345;partial=true;product=hydroxylamine reductase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000265.1 1 2301 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000265.1 RefSeq region 1 2301 . + . ID=NZ_JAATTN010000265.1:1..2301;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000265.1 RefSeq gene 23 943 . - . ID=gene-HGK48_RS09350;Name=HGK48_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09350 NZ_JAATTN010000265.1 Protein Homology CDS 23 943 . - 0 ID=cds-WP_024305378.1;Parent=gene-HGK48_RS09350;Dbxref=GenBank:WP_024305378.1;Name=WP_024305378.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732049.1;locus_tag=HGK48_RS09350;product=AEC family transporter;protein_id=WP_024305378.1;transl_table=11 NZ_JAATTN010000265.1 RefSeq gene 1062 2301 . + . ID=gene-HGK48_RS09355;Name=rmuC;end_range=2301,.;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=HGK48_RS09355;partial=true NZ_JAATTN010000265.1 Protein Homology CDS 1062 2301 . + 0 ID=cds-WP_168236889.1;Parent=gene-HGK48_RS09355;Dbxref=GenBank:WP_168236889.1;Name=WP_168236889.1;end_range=2301,.;gbkey=CDS;gene=rmuC;inference=COORDINATES: protein motif:HMM:NF014680.6;locus_tag=HGK48_RS09355;partial=true;product=DNA recombination protein RmuC;protein_id=WP_168236889.1;transl_table=11 ##sequence-region NZ_JAATTN010000266.1 1 2295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000266.1 RefSeq region 1 2295 . + . ID=NZ_JAATTN010000266.1:1..2295;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000266.1 RefSeq gene 1 311 . + . ID=gene-HGK48_RS09360;Name=HGK48_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09360;partial=true;start_range=.,1 NZ_JAATTN010000266.1 GeneMarkS-2+ CDS 1 311 . + 2 ID=cds-WP_394352685.1;Parent=gene-HGK48_RS09360;Dbxref=GenBank:WP_394352685.1;Name=WP_394352685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09360;partial=true;product=hypothetical protein;protein_id=WP_394352685.1;start_range=.,1;transl_table=11 NZ_JAATTN010000266.1 RefSeq gene 326 1504 . + . ID=gene-HGK48_RS09365;Name=HGK48_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09365 NZ_JAATTN010000266.1 Protein Homology CDS 326 1504 . + 0 ID=cds-WP_024305178.1;Parent=gene-HGK48_RS09365;Dbxref=GenBank:WP_024305178.1;Name=WP_024305178.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002951509.1;locus_tag=HGK48_RS09365;product=glutathionylspermidine synthase family protein;protein_id=WP_024305178.1;transl_table=11 NZ_JAATTN010000266.1 RefSeq gene 1504 2046 . + . ID=gene-HGK48_RS09370;Name=HGK48_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09370 NZ_JAATTN010000266.1 Protein Homology CDS 1504 2046 . + 0 ID=cds-WP_002850738.1;Parent=gene-HGK48_RS09370;Dbxref=GenBank:WP_002850738.1;Name=WP_002850738.1;Ontology_term=GO:0004659;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850738.1;locus_tag=HGK48_RS09370;product=UbiX family flavin prenyltransferase;protein_id=WP_002850738.1;transl_table=11 ##sequence-region NZ_JAATTN010000267.1 1 2290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000267.1 RefSeq region 1 2290 . + . ID=NZ_JAATTN010000267.1:1..2290;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000267.1 RefSeq gene 1 796 . - . ID=gene-HGK48_RS09380;Name=HGK48_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09380;partial=true;start_range=.,1 NZ_JAATTN010000267.1 Protein Homology CDS 1 796 . - 0 ID=cds-WP_168236890.1;Parent=gene-HGK48_RS09380;Dbxref=GenBank:WP_168236890.1;Name=WP_168236890.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012789.6;locus_tag=HGK48_RS09380;partial=true;product=UvrD-helicase domain-containing protein;protein_id=WP_168236890.1;start_range=.,1;transl_table=11 NZ_JAATTN010000267.1 RefSeq gene 793 2290 . - . ID=gene-HGK48_RS09385;Name=HGK48_RS09385;end_range=2290,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09385;partial=true NZ_JAATTN010000267.1 Protein Homology CDS 793 2290 . - 1 ID=cds-WP_168236891.1;Parent=gene-HGK48_RS09385;Dbxref=GenBank:WP_168236891.1;Name=WP_168236891.1;end_range=2290,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024117.6;locus_tag=HGK48_RS09385;partial=true;product=RecB family exonuclease;protein_id=WP_168236891.1;transl_table=11 ##sequence-region NZ_JAATTN010000268.1 1 2266 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000268.1 RefSeq region 1 2266 . + . ID=NZ_JAATTN010000268.1:1..2266;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000268.1 RefSeq gene 102 965 . + . ID=gene-HGK48_RS09390;Name=HGK48_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09390 NZ_JAATTN010000268.1 Protein Homology CDS 102 965 . + 0 ID=cds-WP_010401859.1;Parent=gene-HGK48_RS09390;Dbxref=GenBank:WP_010401859.1;Name=WP_010401859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010401859.1;locus_tag=HGK48_RS09390;product=NAD(+) kinase;protein_id=WP_010401859.1;transl_table=11 NZ_JAATTN010000268.1 RefSeq gene 955 2266 . + . ID=gene-HGK48_RS09395;Name=HGK48_RS09395;end_range=2266,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09395;partial=true NZ_JAATTN010000268.1 Protein Homology CDS 955 2266 . + 0 ID=cds-WP_168236892.1;Parent=gene-HGK48_RS09395;Dbxref=GenBank:WP_168236892.1;Name=WP_168236892.1;Ontology_term=GO:0006302,GO:0016887;end_range=2266,.;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732116.1;locus_tag=HGK48_RS09395;partial=true;product=AAA family ATPase;protein_id=WP_168236892.1;transl_table=11 ##sequence-region NZ_JAATTN010000269.1 1 2246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000269.1 RefSeq region 1 2246 . + . ID=NZ_JAATTN010000269.1:1..2246;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000269.1 RefSeq gene 1 2246 . + . ID=gene-HGK48_RS09400;Name=HGK48_RS09400;end_range=2246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09400;partial=true;start_range=.,1 NZ_JAATTN010000269.1 GeneMarkS-2+ CDS 1 2246 . + 0 ID=cds-WP_206120323.1;Parent=gene-HGK48_RS09400;Dbxref=GenBank:WP_206120323.1;Name=WP_206120323.1;end_range=2246,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09400;partial=true;product=hypothetical protein;protein_id=WP_206120323.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000026.1 1 11982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000026.1 RefSeq region 1 11982 . + . ID=NZ_JAATTN010000026.1:1..11982;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000026.1 RefSeq gene 1 673 . - . ID=gene-HGK48_RS02445;Name=HGK48_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02445;partial=true;start_range=.,1 NZ_JAATTN010000026.1 Protein Homology CDS 1 673 . - 0 ID=cds-WP_168236663.1;Parent=gene-HGK48_RS02445;Dbxref=GenBank:WP_168236663.1;Name=WP_168236663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731953.1;locus_tag=HGK48_RS02445;partial=true;product=transporter substrate-binding domain-containing protein;protein_id=WP_168236663.1;start_range=.,1;transl_table=11 NZ_JAATTN010000026.1 RefSeq gene 802 1347 . - . ID=gene-HGK48_RS02450;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=HGK48_RS02450 NZ_JAATTN010000026.1 Protein Homology CDS 802 1347 . - 0 ID=cds-WP_002849224.1;Parent=gene-HGK48_RS02450;Dbxref=GenBank:WP_002849224.1;Name=WP_002849224.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849224.1;locus_tag=HGK48_RS02450;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_002849224.1;transl_table=11 NZ_JAATTN010000026.1 RefSeq gene 1344 2132 . - . ID=gene-HGK48_RS02455;Name=HGK48_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02455 NZ_JAATTN010000026.1 Protein Homology CDS 1344 2132 . - 0 ID=cds-WP_002849226.1;Parent=gene-HGK48_RS02455;Dbxref=GenBank:WP_002849226.1;Name=WP_002849226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002947869.1;locus_tag=HGK48_RS02455;product=enoyl-ACP reductase;protein_id=WP_002849226.1;transl_table=11 NZ_JAATTN010000026.1 RefSeq gene 2132 3025 . - . ID=gene-HGK48_RS02460;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=HGK48_RS02460 NZ_JAATTN010000026.1 Protein Homology CDS 2132 3025 . - 0 ID=cds-WP_002849227.1;Parent=gene-HGK48_RS02460;Dbxref=GenBank:WP_002849227.1;Name=WP_002849227.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012001835.1;locus_tag=HGK48_RS02460;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002849227.1;transl_table=11 NZ_JAATTN010000026.1 RefSeq gene 3022 4269 . - . ID=gene-HGK48_RS02465;Name=HGK48_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02465 NZ_JAATTN010000026.1 Protein Homology CDS 3022 4269 . - 0 ID=cds-WP_024305216.1;Parent=gene-HGK48_RS02465;Dbxref=GenBank:WP_024305216.1;Name=WP_024305216.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731954.1;locus_tag=HGK48_RS02465;product=M16 family metallopeptidase;protein_id=WP_024305216.1;transl_table=11 NZ_JAATTN010000026.1 RefSeq gene 4270 5328 . - . ID=gene-HGK48_RS02470;Name=HGK48_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02470 NZ_JAATTN010000026.1 Protein Homology CDS 4270 5328 . - 0 ID=cds-WP_002849228.1;Parent=gene-HGK48_RS02470;Dbxref=GenBank:WP_002849228.1;Name=WP_002849228.1;Ontology_term=GO:0006207,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849228.1;locus_tag=HGK48_RS02470;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_002849228.1;transl_table=11 NZ_JAATTN010000026.1 RefSeq gene 5380 7098 . - . ID=gene-HGK48_RS02475;Name=HGK48_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02475 NZ_JAATTN010000026.1 Protein Homology CDS 5380 7098 . - 0 ID=cds-WP_011731955.1;Parent=gene-HGK48_RS02475;Dbxref=GenBank:WP_011731955.1;Name=WP_011731955.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731955.1;locus_tag=HGK48_RS02475;product=ABC transporter ATP-binding protein;protein_id=WP_011731955.1;transl_table=11 NZ_JAATTN010000026.1 RefSeq gene 7095 8474 . - . ID=gene-HGK48_RS02480;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=HGK48_RS02480 NZ_JAATTN010000026.1 Protein Homology CDS 7095 8474 . - 0 ID=cds-WP_024305217.1;Parent=gene-HGK48_RS02480;Dbxref=GenBank:WP_024305217.1;Name=WP_024305217.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011992254.1;locus_tag=HGK48_RS02480;product=cysteine--tRNA ligase;protein_id=WP_024305217.1;transl_table=11 NZ_JAATTN010000026.1 RefSeq gene 8458 9858 . - . ID=gene-HGK48_RS02485;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=HGK48_RS02485 NZ_JAATTN010000026.1 Protein Homology CDS 8458 9858 . - 0 ID=cds-WP_011731957.1;Parent=gene-HGK48_RS02485;Dbxref=GenBank:WP_011731957.1;Name=WP_011731957.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731957.1;locus_tag=HGK48_RS02485;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_011731957.1;transl_table=11 NZ_JAATTN010000026.1 RefSeq gene 10216 11910 . + . ID=gene-HGK48_RS02490;Name=HGK48_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02490 NZ_JAATTN010000026.1 Protein Homology CDS 10216 11910 . + 0 ID=cds-WP_024305218.1;Parent=gene-HGK48_RS02490;Dbxref=GenBank:WP_024305218.1;Name=WP_024305218.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF012492.6;locus_tag=HGK48_RS02490;product=DEAD/DEAH box helicase;protein_id=WP_024305218.1;transl_table=11 ##sequence-region NZ_JAATTN010000270.1 1 2246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000270.1 RefSeq region 1 2246 . + . ID=NZ_JAATTN010000270.1:1..2246;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000270.1 RefSeq gene 1 212 . - . ID=gene-HGK48_RS11105;Name=HGK48_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11105;partial=true;start_range=.,1 NZ_JAATTN010000270.1 GeneMarkS-2+ CDS 1 212 . - 0 ID=cds-WP_206120324.1;Parent=gene-HGK48_RS11105;Dbxref=GenBank:WP_206120324.1;Name=WP_206120324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11105;partial=true;product=hypothetical protein;protein_id=WP_206120324.1;start_range=.,1;transl_table=11 NZ_JAATTN010000270.1 RefSeq gene 209 778 . - . ID=gene-HGK48_RS09405;Name=HGK48_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09405 NZ_JAATTN010000270.1 Protein Homology CDS 209 778 . - 0 ID=cds-WP_002848843.1;Parent=gene-HGK48_RS09405;Dbxref=GenBank:WP_002848843.1;Name=WP_002848843.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848843.1;locus_tag=HGK48_RS09405;product=DedA family protein;protein_id=WP_002848843.1;transl_table=11 NZ_JAATTN010000270.1 RefSeq gene 787 1371 . - . ID=gene-HGK48_RS09410;Name=HGK48_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09410 NZ_JAATTN010000270.1 Protein Homology CDS 787 1371 . - 0 ID=cds-WP_011731848.1;Parent=gene-HGK48_RS09410;Dbxref=GenBank:WP_011731848.1;Name=WP_011731848.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: protein motif:HMM:NF016269.6;locus_tag=HGK48_RS09410;product=lipid-binding SYLF domain-containing protein;protein_id=WP_011731848.1;transl_table=11 NZ_JAATTN010000270.1 RefSeq gene 1384 2246 . - . ID=gene-HGK48_RS09415;Name=HGK48_RS09415;end_range=2246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09415;partial=true NZ_JAATTN010000270.1 Protein Homology CDS 1384 2246 . - 2 ID=cds-WP_168236893.1;Parent=gene-HGK48_RS09415;Dbxref=GenBank:WP_168236893.1;Name=WP_168236893.1;end_range=2246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344600.1;locus_tag=HGK48_RS09415;partial=true;product=HDIG domain-containing metalloprotein;protein_id=WP_168236893.1;transl_table=11 ##sequence-region NZ_JAATTN010000271.1 1 2229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000271.1 RefSeq region 1 2229 . + . ID=NZ_JAATTN010000271.1:1..2229;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000271.1 RefSeq gene 1 234 . + . ID=gene-HGK48_RS11110;Name=HGK48_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11110;partial=true;start_range=.,1 NZ_JAATTN010000271.1 GeneMarkS-2+ CDS 1 234 . + 0 ID=cds-WP_206120325.1;Parent=gene-HGK48_RS11110;Dbxref=GenBank:WP_206120325.1;Name=WP_206120325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11110;partial=true;product=hypothetical protein;protein_id=WP_206120325.1;start_range=.,1;transl_table=11 NZ_JAATTN010000271.1 RefSeq gene 962 2229 . + . ID=gene-HGK48_RS09420;Name=HGK48_RS09420;end_range=2229,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09420;partial=true NZ_JAATTN010000271.1 Protein Homology CDS 962 2229 . + 0 ID=cds-WP_168236894.1;Parent=gene-HGK48_RS09420;Dbxref=GenBank:WP_168236894.1;Name=WP_168236894.1;end_range=2229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012108658.1;locus_tag=HGK48_RS09420;partial=true;product=acetyl-CoA carboxylase subunit A;protein_id=WP_168236894.1;transl_table=11 ##sequence-region NZ_JAATTN010000272.1 1 2228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000272.1 RefSeq region 1 2228 . + . ID=NZ_JAATTN010000272.1:1..2228;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000272.1 RefSeq gene 1 601 . + . ID=gene-HGK48_RS09425;Name=HGK48_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09425;partial=true;start_range=.,1 NZ_JAATTN010000272.1 Protein Homology CDS 1 601 . + 1 ID=cds-WP_168236895.1;Parent=gene-HGK48_RS09425;Dbxref=GenBank:WP_168236895.1;Name=WP_168236895.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.6;locus_tag=HGK48_RS09425;partial=true;product=glycosyltransferase;protein_id=WP_168236895.1;start_range=.,1;transl_table=11 NZ_JAATTN010000272.1 RefSeq gene 589 2228 . + . ID=gene-HGK48_RS09430;Name=asnB;end_range=2228,.;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=HGK48_RS09430;partial=true NZ_JAATTN010000272.1 Protein Homology CDS 589 2228 . + 0 ID=cds-WP_168236896.1;Parent=gene-HGK48_RS09430;Dbxref=GenBank:WP_168236896.1;Name=WP_168236896.1;Ontology_term=GO:0070981,GO:0004066;end_range=2228,.;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: protein motif:HMM:TIGR01536.1;locus_tag=HGK48_RS09430;partial=true;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_168236896.1;transl_table=11 ##sequence-region NZ_JAATTN010000273.1 1 2212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000273.1 RefSeq region 1 2212 . + . ID=NZ_JAATTN010000273.1:1..2212;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000273.1 RefSeq pseudogene 1 303 . - . ID=gene-HGK48_RS09435;Name=HGK48_RS09435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09435;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000273.1 Protein Homology CDS 1 303 . - 0 ID=cds-HGK48_RS09435;Parent=gene-HGK48_RS09435;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941912.1;locus_tag=HGK48_RS09435;partial=true;product=histidinol phosphate phosphatase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000273.1 RefSeq pseudogene 362 484 . + . ID=gene-HGK48_RS11475;Name=HGK48_RS11475;end_range=484,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11475;partial=true;pseudo=true NZ_JAATTN010000273.1 Protein Homology CDS 362 484 . + 0 ID=cds-HGK48_RS11475;Parent=gene-HGK48_RS11475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=484,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014826.6;locus_tag=HGK48_RS11475;partial=true;product=histidinol phosphate phosphatase;pseudo=true;transl_table=11 NZ_JAATTN010000273.1 RefSeq gene 521 757 . + . ID=gene-HGK48_RS11480;Name=HGK48_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11480 NZ_JAATTN010000273.1 GeneMarkS-2+ CDS 521 757 . + 0 ID=cds-WP_240944841.1;Parent=gene-HGK48_RS11480;Dbxref=GenBank:WP_240944841.1;Name=WP_240944841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11480;product=PHP-associated domain-containing protein;protein_id=WP_240944841.1;transl_table=11 NZ_JAATTN010000273.1 RefSeq gene 846 2212 . + . ID=gene-HGK48_RS09445;Name=glnA;end_range=2212,.;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=HGK48_RS09445;partial=true NZ_JAATTN010000273.1 Protein Homology CDS 846 2212 . + 0 ID=cds-WP_168236897.1;Parent=gene-HGK48_RS09445;Dbxref=GenBank:WP_168236897.1;Name=WP_168236897.1;Ontology_term=GO:0006542,GO:0004356;end_range=2212,.;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344117.1;locus_tag=HGK48_RS09445;partial=true;product=type I glutamate--ammonia ligase;protein_id=WP_168236897.1;transl_table=11 ##sequence-region NZ_JAATTN010000274.1 1 2184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000274.1 RefSeq region 1 2184 . + . ID=NZ_JAATTN010000274.1:1..2184;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000274.1 RefSeq gene 211 687 . + . ID=gene-HGK48_RS09450;Name=HGK48_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09450 NZ_JAATTN010000274.1 Protein Homology CDS 211 687 . + 0 ID=cds-WP_002848148.1;Parent=gene-HGK48_RS09450;Dbxref=GenBank:WP_002848148.1;Name=WP_002848148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011989606.1;locus_tag=HGK48_RS09450;product=hypothetical protein;protein_id=WP_002848148.1;transl_table=11 NZ_JAATTN010000274.1 RefSeq gene 684 1985 . - . ID=gene-HGK48_RS09455;Name=HGK48_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09455 NZ_JAATTN010000274.1 Protein Homology CDS 684 1985 . - 0 ID=cds-WP_011731717.1;Parent=gene-HGK48_RS09455;Dbxref=GenBank:WP_011731717.1;Name=WP_011731717.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848147.1;locus_tag=HGK48_RS09455;product=hemolysin family protein;protein_id=WP_011731717.1;transl_table=11 ##sequence-region NZ_JAATTN010000275.1 1 2157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000275.1 RefSeq region 1 2157 . + . ID=NZ_JAATTN010000275.1:1..2157;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000275.1 RefSeq gene 1 504 . - . ID=gene-HGK48_RS09460;Name=HGK48_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09460;partial=true;start_range=.,1 NZ_JAATTN010000275.1 Protein Homology CDS 1 504 . - 0 ID=cds-WP_168236898.1;Parent=gene-HGK48_RS09460;Dbxref=GenBank:WP_168236898.1;Name=WP_168236898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869250.1;locus_tag=HGK48_RS09460;partial=true;product=Rha family transcriptional regulator;protein_id=WP_168236898.1;start_range=.,1;transl_table=11 NZ_JAATTN010000275.1 RefSeq gene 667 1182 . - . ID=gene-HGK48_RS09465;Name=HGK48_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09465 NZ_JAATTN010000275.1 Protein Homology CDS 667 1182 . - 0 ID=cds-WP_065840825.1;Parent=gene-HGK48_RS09465;Dbxref=GenBank:WP_065840825.1;Name=WP_065840825.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF014548.6;locus_tag=HGK48_RS09465;product=BRO-N domain-containing protein;protein_id=WP_065840825.1;transl_table=11 NZ_JAATTN010000275.1 RefSeq gene 1183 2157 . - . ID=gene-HGK48_RS09470;Name=HGK48_RS09470;end_range=2157,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09470;partial=true NZ_JAATTN010000275.1 Protein Homology CDS 1183 2157 . - 0 ID=cds-WP_168236899.1;Parent=gene-HGK48_RS09470;Dbxref=GenBank:WP_168236899.1;Name=WP_168236899.1;end_range=2157,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016491.6;locus_tag=HGK48_RS09470;partial=true;product=type IV secretion system protein;protein_id=WP_168236899.1;transl_table=11 ##sequence-region NZ_JAATTN010000276.1 1 2152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000276.1 RefSeq region 1 2152 . + . ID=NZ_JAATTN010000276.1:1..2152;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000276.1 RefSeq pseudogene 1 482 . - . ID=gene-HGK48_RS09475;Name=HGK48_RS09475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09475;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000276.1 Protein Homology CDS 1 482 . - 0 ID=cds-HGK48_RS09475;Parent=gene-HGK48_RS09475;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848686.1;locus_tag=HGK48_RS09475;partial=true;product=type I secretion system permease/ATPase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000276.1 RefSeq gene 469 1611 . - . ID=gene-HGK48_RS09480;Name=HGK48_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09480 NZ_JAATTN010000276.1 Protein Homology CDS 469 1611 . - 0 ID=cds-WP_011731828.1;Parent=gene-HGK48_RS09480;Dbxref=GenBank:WP_011731828.1;Name=WP_011731828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731828.1;locus_tag=HGK48_RS09480;product=SapC family protein;protein_id=WP_011731828.1;transl_table=11 ##sequence-region NZ_JAATTN010000277.1 1 2140 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000277.1 RefSeq region 1 2140 . + . ID=NZ_JAATTN010000277.1:1..2140;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000277.1 RefSeq gene 1 308 . + . ID=gene-HGK48_RS09485;Name=HGK48_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09485;partial=true;start_range=.,1 NZ_JAATTN010000277.1 Protein Homology CDS 1 308 . + 2 ID=cds-WP_168236900.1;Parent=gene-HGK48_RS09485;Dbxref=GenBank:WP_168236900.1;Name=WP_168236900.1;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732080.1;locus_tag=HGK48_RS09485;partial=true;product=TOBE domain-containing protein;protein_id=WP_168236900.1;start_range=.,1;transl_table=11 NZ_JAATTN010000277.1 RefSeq gene 292 927 . + . ID=gene-HGK48_RS09490;Name=HGK48_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09490 NZ_JAATTN010000277.1 Protein Homology CDS 292 927 . + 0 ID=cds-WP_002849701.1;Parent=gene-HGK48_RS09490;Dbxref=GenBank:WP_002849701.1;Name=WP_002849701.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:TIGR01490.1;locus_tag=HGK48_RS09490;product=HAD family hydrolase;protein_id=WP_002849701.1;transl_table=11 NZ_JAATTN010000277.1 RefSeq gene 975 1562 . - . ID=gene-HGK48_RS09495;Name=HGK48_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09495 NZ_JAATTN010000277.1 Protein Homology CDS 975 1562 . - 0 ID=cds-WP_002849700.1;Parent=gene-HGK48_RS09495;Dbxref=GenBank:WP_002849700.1;Name=WP_002849700.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849700.1;locus_tag=HGK48_RS09495;product=aminotransferase class IV;protein_id=WP_002849700.1;transl_table=11 NZ_JAATTN010000277.1 RefSeq gene 1528 2140 . - . ID=gene-HGK48_RS09500;Name=HGK48_RS09500;end_range=2140,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09500;partial=true NZ_JAATTN010000277.1 Protein Homology CDS 1528 2140 . - 1 ID=cds-WP_168236901.1;Parent=gene-HGK48_RS09500;Dbxref=GenBank:WP_168236901.1;Name=WP_168236901.1;Ontology_term=GO:0009058;end_range=2140,.;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849699.1;locus_tag=HGK48_RS09500;partial=true;product=aminodeoxychorismate synthase component I;protein_id=WP_168236901.1;transl_table=11 ##sequence-region NZ_JAATTN010000278.1 1 2107 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000278.1 RefSeq region 1 2107 . + . ID=NZ_JAATTN010000278.1:1..2107;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000278.1 RefSeq gene 237 653 . - . ID=gene-HGK48_RS09505;Name=HGK48_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09505 NZ_JAATTN010000278.1 GeneMarkS-2+ CDS 237 653 . - 0 ID=cds-WP_002848177.1;Parent=gene-HGK48_RS09505;Dbxref=GenBank:WP_002848177.1;Name=WP_002848177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09505;product=hypothetical protein;protein_id=WP_002848177.1;transl_table=11 NZ_JAATTN010000278.1 RefSeq gene 650 1234 . - . ID=gene-HGK48_RS09510;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=HGK48_RS09510 NZ_JAATTN010000278.1 Protein Homology CDS 650 1234 . - 0 ID=cds-WP_002848175.1;Parent=gene-HGK48_RS09510;Dbxref=GenBank:WP_002848175.1;Name=WP_002848175.1;gbkey=CDS;gene=cbiM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848175.1;locus_tag=HGK48_RS09510;product=cobalt transporter CbiM;protein_id=WP_002848175.1;transl_table=11 NZ_JAATTN010000278.1 RefSeq gene 1235 1990 . - . ID=gene-HGK48_RS09515;Name=HGK48_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09515 NZ_JAATTN010000278.1 Protein Homology CDS 1235 1990 . - 0 ID=cds-WP_002848173.1;Parent=gene-HGK48_RS09515;Dbxref=GenBank:WP_002848173.1;Name=WP_002848173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848173.1;locus_tag=HGK48_RS09515;product=DUF4198 domain-containing protein;protein_id=WP_002848173.1;transl_table=11 ##sequence-region NZ_JAATTN010000279.1 1 2099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000279.1 RefSeq region 1 2099 . + . ID=NZ_JAATTN010000279.1:1..2099;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000279.1 RefSeq pseudogene 1 76 . - . ID=gene-HGK48_RS09520;Name=HGK48_RS09520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09520;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000279.1 Protein Homology CDS 1 76 . - 0 ID=cds-HGK48_RS09520;Parent=gene-HGK48_RS09520;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849602.1;locus_tag=HGK48_RS09520;partial=true;product=ribosome maturation factor RimM;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000279.1 RefSeq gene 66 311 . - . ID=gene-HGK48_RS09525;Name=HGK48_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09525 NZ_JAATTN010000279.1 Protein Homology CDS 66 311 . - 0 ID=cds-WP_002849604.1;Parent=gene-HGK48_RS09525;Dbxref=GenBank:WP_002849604.1;Name=WP_002849604.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849604.1;locus_tag=HGK48_RS09525;product=KH domain-containing protein;protein_id=WP_002849604.1;transl_table=11 NZ_JAATTN010000279.1 RefSeq gene 317 544 . - . ID=gene-HGK48_RS09530;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=HGK48_RS09530 NZ_JAATTN010000279.1 Protein Homology CDS 317 544 . - 0 ID=cds-WP_002849606.1;Parent=gene-HGK48_RS09530;Dbxref=GenBank:WP_002849606.1;Name=WP_002849606.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849606.1;locus_tag=HGK48_RS09530;product=30S ribosomal protein S16;protein_id=WP_002849606.1;transl_table=11 NZ_JAATTN010000279.1 RefSeq gene 615 1961 . - . ID=gene-HGK48_RS09535;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=HGK48_RS09535 NZ_JAATTN010000279.1 Protein Homology CDS 615 1961 . - 0 ID=cds-WP_010400988.1;Parent=gene-HGK48_RS09535;Dbxref=GenBank:WP_010400988.1;Name=WP_010400988.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010400988.1;locus_tag=HGK48_RS09535;product=signal recognition particle protein;protein_id=WP_010400988.1;transl_table=11 ##sequence-region NZ_JAATTN010000027.1 1 11664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000027.1 RefSeq region 1 11664 . + . ID=NZ_JAATTN010000027.1:1..11664;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000027.1 RefSeq gene 1 471 . + . ID=gene-HGK48_RS02495;Name=HGK48_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02495;partial=true;start_range=.,1 NZ_JAATTN010000027.1 Protein Homology CDS 1 471 . + 0 ID=cds-WP_240944804.1;Parent=gene-HGK48_RS02495;Dbxref=GenBank:WP_240944804.1;Name=WP_240944804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012001812.1;locus_tag=HGK48_RS02495;partial=true;product=AIR synthase-related protein;protein_id=WP_240944804.1;start_range=.,1;transl_table=11 NZ_JAATTN010000027.1 RefSeq gene 485 826 . + . ID=gene-HGK48_RS02500;Name=HGK48_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02500 NZ_JAATTN010000027.1 Protein Homology CDS 485 826 . + 0 ID=cds-WP_002849461.1;Parent=gene-HGK48_RS02500;Dbxref=GenBank:WP_002849461.1;Name=WP_002849461.1;Ontology_term=GO:0051604,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849461.1;locus_tag=HGK48_RS02500;product=hydrogenase maturation nickel metallochaperone HypA/HybF;protein_id=WP_002849461.1;transl_table=11 NZ_JAATTN010000027.1 RefSeq gene 832 3363 . - . ID=gene-HGK48_RS02505;Name=HGK48_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02505 NZ_JAATTN010000027.1 Protein Homology CDS 832 3363 . - 0 ID=cds-WP_024305510.1;Parent=gene-HGK48_RS02505;Dbxref=GenBank:WP_024305510.1;Name=WP_024305510.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024516.7;locus_tag=HGK48_RS02505;product=YhdP family protein;protein_id=WP_024305510.1;transl_table=11 NZ_JAATTN010000027.1 RefSeq gene 3260 4255 . + . ID=gene-HGK48_RS02510;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=HGK48_RS02510 NZ_JAATTN010000027.1 Protein Homology CDS 3260 4255 . + 0 ID=cds-WP_011732004.1;Parent=gene-HGK48_RS02510;Dbxref=GenBank:WP_011732004.1;Name=WP_011732004.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732004.1;locus_tag=HGK48_RS02510;product=endolytic transglycosylase MltG;protein_id=WP_011732004.1;transl_table=11 NZ_JAATTN010000027.1 RefSeq gene 4354 4977 . + . ID=gene-HGK48_RS02515;Name=HGK48_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02515 NZ_JAATTN010000027.1 Protein Homology CDS 4354 4977 . + 0 ID=cds-WP_010399559.1;Parent=gene-HGK48_RS02515;Dbxref=GenBank:WP_010399559.1;Name=WP_010399559.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010399559.1;locus_tag=HGK48_RS02515;product=trimeric intracellular cation channel family protein;protein_id=WP_010399559.1;transl_table=11 NZ_JAATTN010000027.1 RefSeq gene 4980 6143 . + . ID=gene-HGK48_RS02520;Name=HGK48_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02520 NZ_JAATTN010000027.1 Protein Homology CDS 4980 6143 . + 0 ID=cds-WP_011732003.1;Parent=gene-HGK48_RS02520;Dbxref=GenBank:WP_011732003.1;Name=WP_011732003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732003.1;locus_tag=HGK48_RS02520;product=aspartate aminotransferase family protein;protein_id=WP_011732003.1;transl_table=11 NZ_JAATTN010000027.1 RefSeq gene 6144 7010 . + . ID=gene-HGK48_RS02525;Name=HGK48_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02525 NZ_JAATTN010000027.1 Protein Homology CDS 6144 7010 . + 0 ID=cds-WP_002849451.1;Parent=gene-HGK48_RS02525;Dbxref=GenBank:WP_002849451.1;Name=WP_002849451.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002866789.1;locus_tag=HGK48_RS02525;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_002849451.1;transl_table=11 NZ_JAATTN010000027.1 RefSeq gene 7085 7612 . + . ID=gene-HGK48_RS02530;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=HGK48_RS02530 NZ_JAATTN010000027.1 Protein Homology CDS 7085 7612 . + 0 ID=cds-WP_002849449.1;Parent=gene-HGK48_RS02530;Dbxref=GenBank:WP_002849449.1;Name=WP_002849449.1;Ontology_term=GO:0006935,GO:0071973;gbkey=CDS;gene=fliL;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849449.1;locus_tag=HGK48_RS02530;product=flagellar basal body-associated protein FliL;protein_id=WP_002849449.1;transl_table=11 NZ_JAATTN010000027.1 RefSeq gene 7609 7956 . + . ID=gene-HGK48_RS02535;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=HGK48_RS02535 NZ_JAATTN010000027.1 Protein Homology CDS 7609 7956 . + 0 ID=cds-WP_002849445.1;Parent=gene-HGK48_RS02535;Dbxref=GenBank:WP_002849445.1;Name=WP_002849445.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849445.1;locus_tag=HGK48_RS02535;product=holo-ACP synthase;protein_id=WP_002849445.1;transl_table=11 NZ_JAATTN010000027.1 RefSeq gene 7953 8867 . - . ID=gene-HGK48_RS02540;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=HGK48_RS02540 NZ_JAATTN010000027.1 Protein Homology CDS 7953 8867 . - 0 ID=cds-WP_002849443.1;Parent=gene-HGK48_RS02540;Dbxref=GenBank:WP_002849443.1;Name=WP_002849443.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849443.1;locus_tag=HGK48_RS02540;product=cysteine synthase A;protein_id=WP_002849443.1;transl_table=11 NZ_JAATTN010000027.1 RefSeq gene 8878 9291 . - . ID=gene-HGK48_RS02545;Name=HGK48_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02545 NZ_JAATTN010000027.1 Protein Homology CDS 8878 9291 . - 0 ID=cds-WP_168236664.1;Parent=gene-HGK48_RS02545;Dbxref=GenBank:WP_168236664.1;Name=WP_168236664.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732002.1;locus_tag=HGK48_RS02545;product=RrF2 family transcriptional regulator;protein_id=WP_168236664.1;transl_table=11 NZ_JAATTN010000027.1 RefSeq gene 9288 10559 . - . ID=gene-HGK48_RS02550;Name=HGK48_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02550 NZ_JAATTN010000027.1 Protein Homology CDS 9288 10559 . - 0 ID=cds-WP_002849439.1;Parent=gene-HGK48_RS02550;Dbxref=GenBank:WP_002849439.1;Name=WP_002849439.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849439.1;locus_tag=HGK48_RS02550;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_002849439.1;transl_table=11 NZ_JAATTN010000027.1 RefSeq pseudogene 10816 11664 . + . ID=gene-HGK48_RS02555;Name=HGK48_RS02555;end_range=11664,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS02555;partial=true;pseudo=true NZ_JAATTN010000027.1 Protein Homology CDS 10816 11664 . + 0 ID=cds-HGK48_RS02555;Parent=gene-HGK48_RS02555;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=11664,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849437.1;locus_tag=HGK48_RS02555;partial=true;product=hydroxylamine reductase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000280.1 1 2087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000280.1 RefSeq region 1 2087 . + . ID=NZ_JAATTN010000280.1:1..2087;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000280.1 RefSeq gene 64 543 . - . ID=gene-HGK48_RS09540;Name=HGK48_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09540 NZ_JAATTN010000280.1 GeneMarkS-2+ CDS 64 543 . - 0 ID=cds-WP_002848208.1;Parent=gene-HGK48_RS09540;Dbxref=GenBank:WP_002848208.1;Name=WP_002848208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09540;product=hypothetical protein;protein_id=WP_002848208.1;transl_table=11 NZ_JAATTN010000280.1 RefSeq gene 558 1004 . - . ID=gene-HGK48_RS09545;Name=HGK48_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09545 NZ_JAATTN010000280.1 Protein Homology CDS 558 1004 . - 0 ID=cds-WP_002848209.1;Parent=gene-HGK48_RS09545;Dbxref=GenBank:WP_002848209.1;Name=WP_002848209.1;Ontology_term=GO:0006777,GO:0030366,GO:1990140;gbkey=CDS;go_component=molybdopterin synthase complex|1990140||IEA;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848209.1;locus_tag=HGK48_RS09545;product=molybdopterin synthase catalytic subunit;protein_id=WP_002848209.1;transl_table=11 NZ_JAATTN010000280.1 RefSeq gene 1006 1227 . - . ID=gene-HGK48_RS09550;Name=HGK48_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09550 NZ_JAATTN010000280.1 Protein Homology CDS 1006 1227 . - 0 ID=cds-WP_002848211.1;Parent=gene-HGK48_RS09550;Dbxref=GenBank:WP_002848211.1;Name=WP_002848211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002781225.1;locus_tag=HGK48_RS09550;product=MoaD/ThiS family protein;protein_id=WP_002848211.1;transl_table=11 NZ_JAATTN010000280.1 RefSeq gene 1265 2087 . - . ID=gene-HGK48_RS09555;Name=HGK48_RS09555;end_range=2087,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09555;partial=true NZ_JAATTN010000280.1 Protein Homology CDS 1265 2087 . - 1 ID=cds-WP_168236902.1;Parent=gene-HGK48_RS09555;Dbxref=GenBank:WP_168236902.1;Name=WP_168236902.1;end_range=2087,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731734.1;locus_tag=HGK48_RS09555;partial=true;product=NFACT RNA binding domain-containing protein;protein_id=WP_168236902.1;transl_table=11 ##sequence-region NZ_JAATTN010000281.1 1 2044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000281.1 RefSeq region 1 2044 . + . ID=NZ_JAATTN010000281.1:1..2044;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000281.1 RefSeq gene 1 770 . - . ID=gene-HGK48_RS09560;Name=HGK48_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09560;partial=true;start_range=.,1 NZ_JAATTN010000281.1 Protein Homology CDS 1 770 . - 0 ID=cds-WP_168236903.1;Parent=gene-HGK48_RS09560;Dbxref=GenBank:WP_168236903.1;Name=WP_168236903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011049588.1;locus_tag=HGK48_RS09560;partial=true;product=cytolethal distending toxin subunit B family protein;protein_id=WP_168236903.1;start_range=.,1;transl_table=11 NZ_JAATTN010000281.1 RefSeq gene 779 1480 . - . ID=gene-HGK48_RS09565;Name=HGK48_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09565 NZ_JAATTN010000281.1 Protein Homology CDS 779 1480 . - 0 ID=cds-WP_002849499.1;Parent=gene-HGK48_RS09565;Dbxref=GenBank:WP_002849499.1;Name=WP_002849499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849499.1;locus_tag=HGK48_RS09565;product=RICIN domain-containing protein;protein_id=WP_002849499.1;transl_table=11 NZ_JAATTN010000281.1 RefSeq pseudogene 1709 2044 . + . ID=gene-HGK48_RS09570;Name=HGK48_RS09570;end_range=2044,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09570;partial=true;pseudo=true NZ_JAATTN010000281.1 Protein Homology CDS 1709 2044 . + 0 ID=cds-HGK48_RS09570;Parent=gene-HGK48_RS09570;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2044,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014769635.1;locus_tag=HGK48_RS09570;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000282.1 1 1965 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000282.1 RefSeq region 1 1965 . + . ID=NZ_JAATTN010000282.1:1..1965;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000282.1 RefSeq gene 1 649 . + . ID=gene-HGK48_RS09575;Name=HGK48_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09575;partial=true;start_range=.,1 NZ_JAATTN010000282.1 GeneMarkS-2+ CDS 1 649 . + 1 ID=cds-WP_168236904.1;Parent=gene-HGK48_RS09575;Dbxref=GenBank:WP_168236904.1;Name=WP_168236904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09575;partial=true;product=hypothetical protein;protein_id=WP_168236904.1;start_range=.,1;transl_table=11 NZ_JAATTN010000282.1 RefSeq gene 646 1173 . + . ID=gene-HGK48_RS09580;Name=HGK48_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09580 NZ_JAATTN010000282.1 Protein Homology CDS 646 1173 . + 0 ID=cds-WP_002850206.1;Parent=gene-HGK48_RS09580;Dbxref=GenBank:WP_002850206.1;Name=WP_002850206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850206.1;locus_tag=HGK48_RS09580;product=hypothetical protein;protein_id=WP_002850206.1;transl_table=11 NZ_JAATTN010000282.1 RefSeq gene 1160 1696 . + . ID=gene-HGK48_RS09585;Name=HGK48_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09585 NZ_JAATTN010000282.1 GeneMarkS-2+ CDS 1160 1696 . + 0 ID=cds-WP_002850205.1;Parent=gene-HGK48_RS09585;Dbxref=GenBank:WP_002850205.1;Name=WP_002850205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09585;product=hypothetical protein;protein_id=WP_002850205.1;transl_table=11 NZ_JAATTN010000282.1 RefSeq pseudogene 1659 1965 . - . ID=gene-HGK48_RS09590;Name=HGK48_RS09590;end_range=1965,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09590;partial=true;pseudo=true NZ_JAATTN010000282.1 GeneMarkS-2+ CDS 1659 1965 . - 1 ID=cds-HGK48_RS09590;Parent=gene-HGK48_RS09590;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1965,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09590;partial=true;product=tRNA lysidine(34) synthetase TilS;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000283.1 1 2038 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000283.1 RefSeq region 1 2038 . + . ID=NZ_JAATTN010000283.1:1..2038;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000283.1 RefSeq gene 57 575 . - . ID=gene-HGK48_RS09595;Name=HGK48_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09595 NZ_JAATTN010000283.1 Protein Homology CDS 57 575 . - 0 ID=cds-WP_002849623.1;Parent=gene-HGK48_RS09595;Dbxref=GenBank:WP_002849623.1;Name=WP_002849623.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849623.1;locus_tag=HGK48_RS09595;product=ankyrin repeat domain-containing protein;protein_id=WP_002849623.1;transl_table=11 NZ_JAATTN010000283.1 RefSeq pseudogene 687 2038 . - . ID=gene-HGK48_RS09600;Name=HGK48_RS09600;end_range=2038,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09600;partial=true;pseudo=true NZ_JAATTN010000283.1 Protein Homology CDS 687 2038 . - 0 ID=cds-HGK48_RS09600;Parent=gene-HGK48_RS09600;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004096,GO:0020037,GO:0046872;end_range=2038,.;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849625.1;locus_tag=HGK48_RS09600;partial=true;product=catalase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000284.1 1 1907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000284.1 RefSeq region 1 1907 . + . ID=NZ_JAATTN010000284.1:1..1907;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000284.1 RefSeq pseudogene 1 219 . + . ID=gene-HGK48_RS09605;Name=HGK48_RS09605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09605;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000284.1 Protein Homology CDS 1 219 . + 0 ID=cds-HGK48_RS09605;Parent=gene-HGK48_RS09605;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850273.1;locus_tag=HGK48_RS09605;partial=true;product=glycosyltransferase family 4 protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000284.1 RefSeq gene 164 1282 . - . ID=gene-HGK48_RS09610;Name=HGK48_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09610 NZ_JAATTN010000284.1 Protein Homology CDS 164 1282 . - 0 ID=cds-WP_002850272.1;Parent=gene-HGK48_RS09610;Dbxref=GenBank:WP_002850272.1;Name=WP_002850272.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850272.1;locus_tag=HGK48_RS09610;product=glycosyltransferase family 9 protein;protein_id=WP_002850272.1;transl_table=11 NZ_JAATTN010000284.1 RefSeq gene 1339 1907 . + . ID=gene-HGK48_RS09615;Name=HGK48_RS09615;end_range=1907,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09615;partial=true NZ_JAATTN010000284.1 Protein Homology CDS 1339 1907 . + 0 ID=cds-WP_168236905.1;Parent=gene-HGK48_RS09615;Dbxref=GenBank:WP_168236905.1;Name=WP_168236905.1;Ontology_term=GO:0005975,GO:0016787,GO:0016810,GO:0046872;end_range=1907,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850271.1;locus_tag=HGK48_RS09615;partial=true;product=polysaccharide deacetylase family protein;protein_id=WP_168236905.1;transl_table=11 ##sequence-region NZ_JAATTN010000285.1 1 1985 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000285.1 RefSeq region 1 1985 . + . ID=NZ_JAATTN010000285.1:1..1985;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000285.1 RefSeq gene 1 792 . + . ID=gene-HGK48_RS09620;Name=HGK48_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09620;partial=true;start_range=.,1 NZ_JAATTN010000285.1 Protein Homology CDS 1 792 . + 0 ID=cds-WP_168236906.1;Parent=gene-HGK48_RS09620;Dbxref=GenBank:WP_168236906.1;Name=WP_168236906.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004320212.1;locus_tag=HGK48_RS09620;partial=true;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=WP_168236906.1;start_range=.,1;transl_table=11 NZ_JAATTN010000285.1 RefSeq gene 789 1484 . + . ID=gene-HGK48_RS09625;Name=HGK48_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09625 NZ_JAATTN010000285.1 Protein Homology CDS 789 1484 . + 0 ID=cds-WP_002850267.1;Parent=gene-HGK48_RS09625;Dbxref=GenBank:WP_002850267.1;Name=WP_002850267.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850267.1;locus_tag=HGK48_RS09625;product=glycosyltransferase family 2 protein;protein_id=WP_002850267.1;transl_table=11 NZ_JAATTN010000285.1 RefSeq gene 1481 1985 . + . ID=gene-HGK48_RS09630;Name=HGK48_RS09630;end_range=1985,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09630;partial=true NZ_JAATTN010000285.1 Protein Homology CDS 1481 1985 . + 0 ID=cds-WP_168236907.1;Parent=gene-HGK48_RS09630;Dbxref=GenBank:WP_168236907.1;Name=WP_168236907.1;Ontology_term=GO:0016757;end_range=1985,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732192.1;locus_tag=HGK48_RS09630;partial=true;product=glycosyltransferase family 9 protein;protein_id=WP_168236907.1;transl_table=11 ##sequence-region NZ_JAATTN010000286.1 1 1980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000286.1 RefSeq region 1 1980 . + . ID=NZ_JAATTN010000286.1:1..1980;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000286.1 RefSeq gene 1 745 . - . ID=gene-HGK48_RS09635;Name=HGK48_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09635;partial=true;start_range=.,1 NZ_JAATTN010000286.1 Protein Homology CDS 1 745 . - 0 ID=cds-WP_168236908.1;Parent=gene-HGK48_RS09635;Dbxref=GenBank:WP_168236908.1;Name=WP_168236908.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849995.1;locus_tag=HGK48_RS09635;partial=true;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_168236908.1;start_range=.,1;transl_table=11 NZ_JAATTN010000286.1 RefSeq gene 746 1354 . - . ID=gene-HGK48_RS09640;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=HGK48_RS09640 NZ_JAATTN010000286.1 Protein Homology CDS 746 1354 . - 0 ID=cds-WP_002849993.1;Parent=gene-HGK48_RS09640;Dbxref=GenBank:WP_002849993.1;Name=WP_002849993.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849993.1;locus_tag=HGK48_RS09640;product=thiamine phosphate synthase;protein_id=WP_002849993.1;transl_table=11 NZ_JAATTN010000286.1 RefSeq gene 1392 1980 . - . ID=gene-HGK48_RS09645;Name=HGK48_RS09645;end_range=1980,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09645;partial=true NZ_JAATTN010000286.1 Protein Homology CDS 1392 1980 . - 1 ID=cds-WP_168236909.1;Parent=gene-HGK48_RS09645;Dbxref=GenBank:WP_168236909.1;Name=WP_168236909.1;end_range=1980,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849991.1;locus_tag=HGK48_RS09645;partial=true;product=transporter substrate-binding domain-containing protein;protein_id=WP_168236909.1;transl_table=11 ##sequence-region NZ_JAATTN010000287.1 1 1972 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000287.1 RefSeq region 1 1972 . + . ID=NZ_JAATTN010000287.1:1..1972;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000287.1 RefSeq gene 1 484 . - . ID=gene-HGK48_RS09650;Name=HGK48_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09650;partial=true;start_range=.,1 NZ_JAATTN010000287.1 Protein Homology CDS 1 484 . - 0 ID=cds-WP_168236910.1;Parent=gene-HGK48_RS09650;Dbxref=GenBank:WP_168236910.1;Name=WP_168236910.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024831.6;locus_tag=HGK48_RS09650;partial=true;product=glycosyltransferase;protein_id=WP_168236910.1;start_range=.,1;transl_table=11 NZ_JAATTN010000287.1 RefSeq gene 481 1206 . - . ID=gene-HGK48_RS09655;Name=HGK48_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09655 NZ_JAATTN010000287.1 Protein Homology CDS 481 1206 . - 0 ID=cds-WP_002850681.1;Parent=gene-HGK48_RS09655;Dbxref=GenBank:WP_002850681.1;Name=WP_002850681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011371828.1;locus_tag=HGK48_RS09655;product=methyltransferase domain-containing protein;protein_id=WP_002850681.1;transl_table=11 NZ_JAATTN010000287.1 RefSeq pseudogene 1206 1972 . - . ID=gene-HGK48_RS09660;Name=HGK48_RS09660;end_range=1972,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09660;partial=true;pseudo=true NZ_JAATTN010000287.1 GeneMarkS-2+ CDS 1206 1972 . - 2 ID=cds-HGK48_RS09660;Parent=gene-HGK48_RS09660;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1972,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09660;partial=true;product=CDP-glycerol glycerophosphotransferase family protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000288.1 1 1963 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000288.1 RefSeq region 1 1963 . + . ID=NZ_JAATTN010000288.1:1..1963;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000288.1 RefSeq gene 84 1963 . + . ID=gene-HGK48_RS09665;Name=HGK48_RS09665;end_range=1963,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09665;partial=true NZ_JAATTN010000288.1 Protein Homology CDS 84 1963 . + 0 ID=cds-WP_168236911.1;Parent=gene-HGK48_RS09665;Dbxref=GenBank:WP_168236911.1;Name=WP_168236911.1;end_range=1963,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779346.1;locus_tag=HGK48_RS09665;partial=true;product=proline dehydrogenase family protein;protein_id=WP_168236911.1;transl_table=11 ##sequence-region NZ_JAATTN010000289.1 1 1960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000289.1 RefSeq region 1 1960 . + . ID=NZ_JAATTN010000289.1:1..1960;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000289.1 RefSeq gene 18 635 . - . ID=gene-HGK48_RS09670;Name=HGK48_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09670 NZ_JAATTN010000289.1 Protein Homology CDS 18 635 . - 0 ID=cds-WP_059431082.1;Parent=gene-HGK48_RS09670;Dbxref=GenBank:WP_059431082.1;Name=WP_059431082.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002801139.1;locus_tag=HGK48_RS09670;product=recombinase family protein;protein_id=WP_059431082.1;transl_table=11 NZ_JAATTN010000289.1 RefSeq gene 898 1164 . + . ID=gene-HGK48_RS09675;Name=HGK48_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09675 NZ_JAATTN010000289.1 Protein Homology CDS 898 1164 . + 0 ID=cds-WP_059431081.1;Parent=gene-HGK48_RS09675;Dbxref=GenBank:WP_059431081.1;Name=WP_059431081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803299.1;locus_tag=HGK48_RS09675;product=TrbC/VirB2 family protein;protein_id=WP_059431081.1;transl_table=11 NZ_JAATTN010000289.1 RefSeq gene 1177 1960 . + . ID=gene-HGK48_RS09680;Name=HGK48_RS09680;end_range=1960,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09680;partial=true NZ_JAATTN010000289.1 Protein Homology CDS 1177 1960 . + 0 ID=cds-WP_206120328.1;Parent=gene-HGK48_RS09680;Dbxref=GenBank:WP_206120328.1;Name=WP_206120328.1;end_range=1960,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016957.6;locus_tag=HGK48_RS09680;partial=true;product=type IV secretion system protein VirB3;protein_id=WP_206120328.1;transl_table=11 ##sequence-region NZ_JAATTN010000028.1 1 11705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000028.1 RefSeq region 1 11705 . + . ID=NZ_JAATTN010000028.1:1..11705;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000028.1 RefSeq gene 1 293 . - . ID=gene-HGK48_RS02560;Name=HGK48_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02560;partial=true;start_range=.,1 NZ_JAATTN010000028.1 Protein Homology CDS 1 293 . - 0 ID=cds-WP_240944805.1;Parent=gene-HGK48_RS02560;Dbxref=GenBank:WP_240944805.1;Name=WP_240944805.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848625.1;locus_tag=HGK48_RS02560;partial=true;product=cation transporter;protein_id=WP_240944805.1;start_range=.,1;transl_table=11 NZ_JAATTN010000028.1 RefSeq gene 302 505 . - . ID=gene-HGK48_RS02565;Name=HGK48_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02565 NZ_JAATTN010000028.1 Protein Homology CDS 302 505 . - 0 ID=cds-WP_011731810.1;Parent=gene-HGK48_RS02565;Dbxref=GenBank:WP_011731810.1;Name=WP_011731810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731810.1;locus_tag=HGK48_RS02565;product=heavy metal transport/detoxification protein;protein_id=WP_011731810.1;transl_table=11 NZ_JAATTN010000028.1 RefSeq gene 502 1059 . - . ID=gene-HGK48_RS02570;Name=HGK48_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02570 NZ_JAATTN010000028.1 Protein Homology CDS 502 1059 . - 0 ID=cds-WP_002848634.1;Parent=gene-HGK48_RS02570;Dbxref=GenBank:WP_002848634.1;Name=WP_002848634.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009492880.1;locus_tag=HGK48_RS02570;product=GNAT family N-acetyltransferase;protein_id=WP_002848634.1;transl_table=11 NZ_JAATTN010000028.1 RefSeq gene 1397 2593 . + . ID=gene-HGK48_RS02575;Name=HGK48_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02575 NZ_JAATTN010000028.1 Protein Homology CDS 1397 2593 . + 0 ID=cds-WP_065439535.1;Parent=gene-HGK48_RS02575;Dbxref=GenBank:WP_065439535.1;Name=WP_065439535.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006656998.1;locus_tag=HGK48_RS02575;product=aromatic amino acid transport family protein;protein_id=WP_065439535.1;transl_table=11 NZ_JAATTN010000028.1 RefSeq gene 2645 3352 . + . ID=gene-HGK48_RS02580;Name=HGK48_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02580 NZ_JAATTN010000028.1 Protein Homology CDS 2645 3352 . + 0 ID=cds-WP_002848636.1;Parent=gene-HGK48_RS02580;Dbxref=GenBank:WP_002848636.1;Name=WP_002848636.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002933240.1;locus_tag=HGK48_RS02580;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_002848636.1;transl_table=11 NZ_JAATTN010000028.1 RefSeq gene 3378 3869 . + . ID=gene-HGK48_RS02585;Name=HGK48_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02585 NZ_JAATTN010000028.1 Protein Homology CDS 3378 3869 . + 0 ID=cds-WP_002848638.1;Parent=gene-HGK48_RS02585;Dbxref=GenBank:WP_002848638.1;Name=WP_002848638.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949776.1;locus_tag=HGK48_RS02585;product=peptidylprolyl isomerase;protein_id=WP_002848638.1;transl_table=11 NZ_JAATTN010000028.1 RefSeq gene 4073 5383 . + . ID=gene-HGK48_RS02590;Name=HGK48_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02590 NZ_JAATTN010000028.1 Protein Homology CDS 4073 5383 . + 0 ID=cds-WP_002848640.1;Parent=gene-HGK48_RS02590;Dbxref=GenBank:WP_002848640.1;Name=WP_002848640.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848640.1;locus_tag=HGK48_RS02590;product=cation:dicarboxylate symporter family transporter;protein_id=WP_002848640.1;transl_table=11 NZ_JAATTN010000028.1 RefSeq gene 5445 6050 . - . ID=gene-HGK48_RS02595;Name=HGK48_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02595 NZ_JAATTN010000028.1 Protein Homology CDS 5445 6050 . - 0 ID=cds-WP_002848643.1;Parent=gene-HGK48_RS02595;Dbxref=GenBank:WP_002848643.1;Name=WP_002848643.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: protein motif:HMM:NF012257.6;locus_tag=HGK48_RS02595;product=Crp/Fnr family transcriptional regulator;protein_id=WP_002848643.1;transl_table=11 NZ_JAATTN010000028.1 RefSeq gene 6252 8633 . + . ID=gene-HGK48_RS02600;Name=HGK48_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02600 NZ_JAATTN010000028.1 Protein Homology CDS 6252 8633 . + 0 ID=cds-WP_002848645.1;Parent=gene-HGK48_RS02600;Dbxref=GenBank:WP_002848645.1;Name=WP_002848645.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001979875.1;locus_tag=HGK48_RS02600;product=molybdopterin-dependent oxidoreductase;protein_id=WP_002848645.1;transl_table=11 NZ_JAATTN010000028.1 RefSeq gene 8635 9159 . + . ID=gene-HGK48_RS02605;Name=HGK48_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02605 NZ_JAATTN010000028.1 GeneMarkS-2+ CDS 8635 9159 . + 0 ID=cds-WP_002848647.1;Parent=gene-HGK48_RS02605;Dbxref=GenBank:WP_002848647.1;Name=WP_002848647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02605;product=hypothetical protein;protein_id=WP_002848647.1;transl_table=11 NZ_JAATTN010000028.1 RefSeq gene 9282 10931 . + . ID=gene-HGK48_RS02610;Name=HGK48_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02610 NZ_JAATTN010000028.1 Protein Homology CDS 9282 10931 . + 0 ID=cds-WP_002848649.1;Parent=gene-HGK48_RS02610;Dbxref=GenBank:WP_002848649.1;Name=WP_002848649.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014567.6;locus_tag=HGK48_RS02610;product=sensor histidine kinase;protein_id=WP_002848649.1;transl_table=11 NZ_JAATTN010000028.1 RefSeq gene 10928 11611 . + . ID=gene-HGK48_RS02615;Name=HGK48_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02615 NZ_JAATTN010000028.1 Protein Homology CDS 10928 11611 . + 0 ID=cds-WP_002848651.1;Parent=gene-HGK48_RS02615;Dbxref=GenBank:WP_002848651.1;Name=WP_002848651.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848651.1;locus_tag=HGK48_RS02615;product=response regulator;protein_id=WP_002848651.1;transl_table=11 ##sequence-region NZ_JAATTN010000290.1 1 1960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000290.1 RefSeq region 1 1960 . + . ID=NZ_JAATTN010000290.1:1..1960;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000290.1 RefSeq gene 1 1207 . + . ID=gene-HGK48_RS09685;Name=HGK48_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09685;partial=true;start_range=.,1 NZ_JAATTN010000290.1 Protein Homology CDS 1 1207 . + 1 ID=cds-WP_168236912.1;Parent=gene-HGK48_RS09685;Dbxref=GenBank:WP_168236912.1;Name=WP_168236912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004284673.1;locus_tag=HGK48_RS09685;partial=true;product=PhoX family protein;protein_id=WP_168236912.1;start_range=.,1;transl_table=11 NZ_JAATTN010000290.1 RefSeq gene 1271 1756 . - . ID=gene-HGK48_RS09690;Name=HGK48_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09690 NZ_JAATTN010000290.1 Protein Homology CDS 1271 1756 . - 0 ID=cds-WP_002849410.1;Parent=gene-HGK48_RS09690;Dbxref=GenBank:WP_002849410.1;Name=WP_002849410.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849410.1;locus_tag=HGK48_RS09690;product=flavodoxin domain-containing protein;protein_id=WP_002849410.1;transl_table=11 ##sequence-region NZ_JAATTN010000291.1 1 1944 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000291.1 RefSeq region 1 1944 . + . ID=NZ_JAATTN010000291.1:1..1944;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000291.1 RefSeq gene 1 107 . - . ID=gene-HGK48_RS09695;Name=HGK48_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09695;partial=true;start_range=.,1 NZ_JAATTN010000291.1 Protein Homology CDS 1 107 . - 0 ID=cds-WP_168236913.1;Parent=gene-HGK48_RS09695;Dbxref=GenBank:WP_168236913.1;Name=WP_168236913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004320117.1;locus_tag=HGK48_RS09695;partial=true;product=DUF1882 domain-containing protein;protein_id=WP_168236913.1;start_range=.,1;transl_table=11 NZ_JAATTN010000291.1 RefSeq gene 107 1351 . - . ID=gene-HGK48_RS09700;Name=HGK48_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09700 NZ_JAATTN010000291.1 Protein Homology CDS 107 1351 . - 0 ID=cds-WP_002849766.1;Parent=gene-HGK48_RS09700;Dbxref=GenBank:WP_002849766.1;Name=WP_002849766.1;Ontology_term=GO:0019264,GO:0004372,GO:0030170;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343839.1;locus_tag=HGK48_RS09700;product=serine hydroxymethyltransferase;protein_id=WP_002849766.1;transl_table=11 NZ_JAATTN010000291.1 RefSeq gene 1348 1944 . - . ID=gene-HGK48_RS09705;Name=HGK48_RS09705;end_range=1944,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09705;partial=true NZ_JAATTN010000291.1 Protein Homology CDS 1348 1944 . - 0 ID=cds-WP_338153894.1;Parent=gene-HGK48_RS09705;Dbxref=GenBank:WP_338153894.1;Name=WP_338153894.1;Ontology_term=GO:0043039,GO:0000166,GO:0004812,GO:0005524;end_range=1944,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002941289.1;locus_tag=HGK48_RS09705;partial=true;product=amino acid--tRNA ligase-related protein;protein_id=WP_338153894.1;transl_table=11 ##sequence-region NZ_JAATTN010000292.1 1 1939 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000292.1 RefSeq region 1 1939 . + . ID=NZ_JAATTN010000292.1:1..1939;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000292.1 RefSeq pseudogene 1 189 . + . ID=gene-HGK48_RS09710;Name=actP;gbkey=Gene;gene=actP;gene_biotype=pseudogene;locus_tag=HGK48_RS09710;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000292.1 Protein Homology CDS 1 189 . + 0 ID=cds-HGK48_RS09710;Parent=gene-HGK48_RS09710;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002837866.1;locus_tag=HGK48_RS09710;partial=true;product=cation acetate symporter;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000292.1 RefSeq gene 227 637 . - . ID=gene-HGK48_RS09715;Name=HGK48_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09715 NZ_JAATTN010000292.1 Protein Homology CDS 227 637 . - 0 ID=cds-WP_002850076.1;Parent=gene-HGK48_RS09715;Dbxref=GenBank:WP_002850076.1;Name=WP_002850076.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850076.1;locus_tag=HGK48_RS09715;product=acyl-CoA thioesterase;protein_id=WP_002850076.1;transl_table=11 NZ_JAATTN010000292.1 RefSeq gene 723 1736 . - . ID=gene-HGK48_RS09720;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=HGK48_RS09720 NZ_JAATTN010000292.1 Protein Homology CDS 723 1736 . - 0 ID=cds-WP_002850078.1;Parent=gene-HGK48_RS09720;Dbxref=GenBank:WP_002850078.1;Name=WP_002850078.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850078.1;locus_tag=HGK48_RS09720;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_002850078.1;transl_table=11 ##sequence-region NZ_JAATTN010000293.1 1 1926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000293.1 RefSeq region 1 1926 . + . ID=NZ_JAATTN010000293.1:1..1926;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000293.1 RefSeq gene 1 389 . - . ID=gene-HGK48_RS09725;Name=HGK48_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09725;partial=true;start_range=.,1 NZ_JAATTN010000293.1 GeneMarkS-2+ CDS 1 389 . - 0 ID=cds-WP_394352686.1;Parent=gene-HGK48_RS09725;Dbxref=GenBank:WP_394352686.1;Name=WP_394352686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09725;partial=true;product=hypothetical protein;protein_id=WP_394352686.1;start_range=.,1;transl_table=11 NZ_JAATTN010000293.1 RefSeq gene 383 1309 . - . ID=gene-HGK48_RS09730;Name=HGK48_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09730 NZ_JAATTN010000293.1 GeneMarkS-2+ CDS 383 1309 . - 0 ID=cds-WP_167497331.1;Parent=gene-HGK48_RS09730;Dbxref=GenBank:WP_167497331.1;Name=WP_167497331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09730;product=hypothetical protein;protein_id=WP_167497331.1;transl_table=11 NZ_JAATTN010000293.1 RefSeq gene 1302 1922 . - . ID=gene-HGK48_RS09735;Name=HGK48_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09735 NZ_JAATTN010000293.1 Protein Homology CDS 1302 1922 . - 0 ID=cds-WP_168236914.1;Parent=gene-HGK48_RS09735;Dbxref=GenBank:WP_168236914.1;Name=WP_168236914.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018713417.1;locus_tag=HGK48_RS09735;product=TrmH family RNA methyltransferase;protein_id=WP_168236914.1;transl_table=11 ##sequence-region NZ_JAATTN010000294.1 1 1924 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000294.1 RefSeq region 1 1924 . + . ID=NZ_JAATTN010000294.1:1..1924;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000294.1 RefSeq pseudogene 37 1924 . + . ID=gene-HGK48_RS09745;Name=HGK48_RS09745;end_range=1924,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09745;partial=true;pseudo=true NZ_JAATTN010000294.1 Protein Homology CDS 37 1924 . + 0 ID=cds-HGK48_RS09745;Parent=gene-HGK48_RS09745;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=1924,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.6;locus_tag=HGK48_RS09745;partial=true;product=filamentous hemagglutinin N-terminal domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000295.1 1 1845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000295.1 RefSeq region 1 1845 . + . ID=NZ_JAATTN010000295.1:1..1845;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000295.1 RefSeq gene 55 1554 . + . ID=gene-HGK48_RS09750;Name=HGK48_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09750 NZ_JAATTN010000295.1 Protein Homology CDS 55 1554 . + 0 ID=cds-WP_002850725.1;Parent=gene-HGK48_RS09750;Dbxref=GenBank:WP_002850725.1;Name=WP_002850725.1;Ontology_term=GO:0006457,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000357005.1;locus_tag=HGK48_RS09750;product=disulfide bond formation protein B;protein_id=WP_002850725.1;transl_table=11 NZ_JAATTN010000295.1 RefSeq pseudogene 1625 1845 . - . ID=gene-HGK48_RS09755;Name=HGK48_RS09755;end_range=1845,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09755;partial=true;pseudo=true NZ_JAATTN010000295.1 Protein Homology CDS 1625 1845 . - 2 ID=cds-HGK48_RS09755;Parent=gene-HGK48_RS09755;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1845,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732298.1;locus_tag=HGK48_RS09755;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000296.1 1 1907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000296.1 RefSeq region 1 1907 . + . ID=NZ_JAATTN010000296.1:1..1907;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000296.1 RefSeq gene 182 970 . - . ID=gene-HGK48_RS09760;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=HGK48_RS09760 NZ_JAATTN010000296.1 Protein Homology CDS 182 970 . - 0 ID=cds-WP_002848865.1;Parent=gene-HGK48_RS09760;Dbxref=GenBank:WP_002848865.1;Name=WP_002848865.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002825384.1;locus_tag=HGK48_RS09760;product=flagellar basal-body rod protein FlgG;protein_id=WP_002848865.1;transl_table=11 NZ_JAATTN010000296.1 RefSeq gene 989 1801 . - . ID=gene-HGK48_RS09765;Name=HGK48_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09765 NZ_JAATTN010000296.1 Protein Homology CDS 989 1801 . - 0 ID=cds-WP_002848864.1;Parent=gene-HGK48_RS09765;Dbxref=GenBank:WP_002848864.1;Name=WP_002848864.1;Ontology_term=GO:0071973,GO:0009425;gbkey=CDS;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848864.1;locus_tag=HGK48_RS09765;product=flagellar hook-basal body protein;protein_id=WP_002848864.1;transl_table=11 ##sequence-region NZ_JAATTN010000297.1 1 1824 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000297.1 RefSeq region 1 1824 . + . ID=NZ_JAATTN010000297.1:1..1824;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000297.1 RefSeq gene 1 1763 . + . ID=gene-HGK48_RS11590;Name=HGK48_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11590;partial=true;start_range=.,1 NZ_JAATTN010000297.1 Protein Homology CDS 1 1763 . + 2 ID=cds-WP_394352687.1;Parent=gene-HGK48_RS11590;Dbxref=GenBank:WP_394352687.1;Name=WP_394352687.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF019291.6;locus_tag=HGK48_RS11590;partial=true;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_394352687.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000298.1 1 1901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000298.1 RefSeq region 1 1901 . + . ID=NZ_JAATTN010000298.1:1..1901;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000298.1 RefSeq gene 52 1901 . - . ID=gene-HGK48_RS09775;Name=HGK48_RS09775;end_range=1901,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09775;partial=true NZ_JAATTN010000298.1 Protein Homology CDS 52 1901 . - 2 ID=cds-WP_394352688.1;Parent=gene-HGK48_RS09775;Dbxref=GenBank:WP_394352688.1;Name=WP_394352688.1;end_range=1901,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731827.1;locus_tag=HGK48_RS09775;partial=true;product=beta strand repeat-containing protein;protein_id=WP_394352688.1;transl_table=11 ##sequence-region NZ_JAATTN010000299.1 1 1806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000299.1 RefSeq region 1 1806 . + . ID=NZ_JAATTN010000299.1:1..1806;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000299.1 RefSeq gene 117 1806 . - . ID=gene-HGK48_RS09780;Name=HGK48_RS09780;end_range=1806,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09780;partial=true NZ_JAATTN010000299.1 Protein Homology CDS 117 1806 . - 1 ID=cds-WP_168236916.1;Parent=gene-HGK48_RS09780;Dbxref=GenBank:WP_168236916.1;Name=WP_168236916.1;end_range=1806,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343475.1;locus_tag=HGK48_RS09780;partial=true;product=toprim domain-containing protein;protein_id=WP_168236916.1;transl_table=11 ##sequence-region NZ_JAATTN010000029.1 1 11603 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000029.1 RefSeq region 1 11603 . + . ID=NZ_JAATTN010000029.1:1..11603;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000029.1 RefSeq gene 1 995 . + . ID=gene-HGK48_RS02620;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=HGK48_RS02620;partial=true;start_range=.,1 NZ_JAATTN010000029.1 Protein Homology CDS 1 995 . + 2 ID=cds-WP_168236666.1;Parent=gene-HGK48_RS02620;Dbxref=GenBank:WP_168236666.1;Name=WP_168236666.1;Ontology_term=GO:0006415,GO:0016149,GO:0005737;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850199.1;locus_tag=HGK48_RS02620;partial=true;product=peptide chain release factor 2;protein_id=WP_168236666.1;start_range=.,1;transl_table=11 NZ_JAATTN010000029.1 RefSeq gene 1041 1364 . + . ID=gene-HGK48_RS02625;Name=HGK48_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02625 NZ_JAATTN010000029.1 Protein Homology CDS 1041 1364 . + 0 ID=cds-WP_002850198.1;Parent=gene-HGK48_RS02625;Dbxref=GenBank:WP_002850198.1;Name=WP_002850198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732173.1;locus_tag=HGK48_RS02625;product=hypothetical protein;protein_id=WP_002850198.1;transl_table=11 NZ_JAATTN010000029.1 RefSeq gene 1374 2690 . + . ID=gene-HGK48_RS02630;Name=HGK48_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02630 NZ_JAATTN010000029.1 Protein Homology CDS 1374 2690 . + 0 ID=cds-WP_002850197.1;Parent=gene-HGK48_RS02630;Dbxref=GenBank:WP_002850197.1;Name=WP_002850197.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850197.1;locus_tag=HGK48_RS02630;product=dihydrolipoyl dehydrogenase family protein;protein_id=WP_002850197.1;transl_table=11 NZ_JAATTN010000029.1 RefSeq gene 2701 3099 . + . ID=gene-HGK48_RS02635;Name=HGK48_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02635 NZ_JAATTN010000029.1 GeneMarkS-2+ CDS 2701 3099 . + 0 ID=cds-WP_002850196.1;Parent=gene-HGK48_RS02635;Dbxref=GenBank:WP_002850196.1;Name=WP_002850196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02635;product=SEL1-like repeat protein;protein_id=WP_002850196.1;transl_table=11 NZ_JAATTN010000029.1 RefSeq gene 3135 4067 . - . ID=gene-HGK48_RS02640;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=HGK48_RS02640 NZ_JAATTN010000029.1 Protein Homology CDS 3135 4067 . - 0 ID=cds-WP_011732172.1;Parent=gene-HGK48_RS02640;Dbxref=GenBank:WP_011732172.1;Name=WP_011732172.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732172.1;locus_tag=HGK48_RS02640;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_011732172.1;transl_table=11 NZ_JAATTN010000029.1 RefSeq gene 4067 5281 . - . ID=gene-HGK48_RS02645;Name=HGK48_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02645 NZ_JAATTN010000029.1 Protein Homology CDS 4067 5281 . - 0 ID=cds-WP_002850194.1;Parent=gene-HGK48_RS02645;Dbxref=GenBank:WP_002850194.1;Name=WP_002850194.1;Ontology_term=GO:0006633,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850194.1;locus_tag=HGK48_RS02645;product=beta-ketoacyl-ACP synthase II;protein_id=WP_002850194.1;transl_table=11 NZ_JAATTN010000029.1 RefSeq gene 5303 5536 . - . ID=gene-HGK48_RS02650;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=HGK48_RS02650 NZ_JAATTN010000029.1 Protein Homology CDS 5303 5536 . - 0 ID=cds-WP_002850193.1;Parent=gene-HGK48_RS02650;Dbxref=GenBank:WP_002850193.1;Name=WP_002850193.1;Ontology_term=GO:0006633,GO:0000036;gbkey=CDS;gene=acpP;go_function=acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343878.1;locus_tag=HGK48_RS02650;product=acyl carrier protein;protein_id=WP_002850193.1;transl_table=11 NZ_JAATTN010000029.1 RefSeq gene 5597 6340 . - . ID=gene-HGK48_RS02655;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=HGK48_RS02655 NZ_JAATTN010000029.1 Protein Homology CDS 5597 6340 . - 0 ID=cds-WP_002850191.1;Parent=gene-HGK48_RS02655;Dbxref=GenBank:WP_002850191.1;Name=WP_002850191.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343872.1;locus_tag=HGK48_RS02655;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_002850191.1;transl_table=11 NZ_JAATTN010000029.1 RefSeq gene 6365 7828 . - . ID=gene-HGK48_RS02660;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=HGK48_RS02660 NZ_JAATTN010000029.1 Protein Homology CDS 6365 7828 . - 0 ID=cds-WP_002850189.1;Parent=gene-HGK48_RS02660;Dbxref=GenBank:WP_002850189.1;Name=WP_002850189.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850189.1;locus_tag=HGK48_RS02660;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_002850189.1;transl_table=11 NZ_JAATTN010000029.1 RefSeq gene 7927 8991 . + . ID=gene-HGK48_RS02665;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=HGK48_RS02665 NZ_JAATTN010000029.1 Protein Homology CDS 7927 8991 . + 0 ID=cds-WP_024305409.1;Parent=gene-HGK48_RS02665;Dbxref=GenBank:WP_024305409.1;Name=WP_024305409.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732170.1;locus_tag=HGK48_RS02665;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_024305409.1;transl_table=11 NZ_JAATTN010000029.1 RefSeq gene 8995 10191 . + . ID=gene-HGK48_RS02670;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=HGK48_RS02670 NZ_JAATTN010000029.1 Protein Homology CDS 8995 10191 . + 0 ID=cds-WP_002850187.1;Parent=gene-HGK48_RS02670;Dbxref=GenBank:WP_002850187.1;Name=WP_002850187.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002815878.1;locus_tag=HGK48_RS02670;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_002850187.1;transl_table=11 NZ_JAATTN010000029.1 RefSeq gene 10284 10359 . + . ID=gene-HGK48_RS02675;Name=HGK48_RS02675;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS02675 NZ_JAATTN010000029.1 tRNAscan-SE tRNA 10284 10359 . + . ID=rna-HGK48_RS02675;Parent=gene-HGK48_RS02675;anticodon=(pos:10317..10319);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS02675;product=tRNA-Phe NZ_JAATTN010000029.1 tRNAscan-SE exon 10284 10359 . + . ID=exon-HGK48_RS02675-1;Parent=rna-HGK48_RS02675;anticodon=(pos:10317..10319);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS02675;product=tRNA-Phe NZ_JAATTN010000029.1 RefSeq gene 10507 11031 . - . ID=gene-HGK48_RS02680;Name=HGK48_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02680 NZ_JAATTN010000029.1 Protein Homology CDS 10507 11031 . - 0 ID=cds-WP_010402272.1;Parent=gene-HGK48_RS02680;Dbxref=GenBank:WP_010402272.1;Name=WP_010402272.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850185.1;locus_tag=HGK48_RS02680;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_010402272.1;transl_table=11 NZ_JAATTN010000029.1 RefSeq pseudogene 11271 11603 . + . ID=gene-HGK48_RS02685;Name=pglE;end_range=11603,.;gbkey=Gene;gene=pglE;gene_biotype=pseudogene;locus_tag=HGK48_RS02685;partial=true;pseudo=true NZ_JAATTN010000029.1 Protein Homology CDS 11271 11603 . + 0 ID=cds-HGK48_RS02685;Parent=gene-HGK48_RS02685;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=11603,.;gbkey=CDS;gene=pglE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_065843131.1;locus_tag=HGK48_RS02685;partial=true;product=UDP-N-acetylbacillosamine transaminase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000002.1 1 26679 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000002.1 RefSeq region 1 26679 . + . ID=NZ_JAATTN010000002.1:1..26679;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000002.1 RefSeq gene 1 617 . + . ID=gene-HGK48_RS00205;Name=HGK48_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00205;partial=true;start_range=.,1 NZ_JAATTN010000002.1 Protein Homology CDS 1 617 . + 2 ID=cds-WP_168236619.1;Parent=gene-HGK48_RS00205;Dbxref=GenBank:WP_168236619.1;Name=WP_168236619.1;Ontology_term=GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: protein motif:HMM:NF012772.6;locus_tag=HGK48_RS00205;partial=true;product=EAL domain-containing protein;protein_id=WP_168236619.1;start_range=.,1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 620 1060 . + . ID=gene-HGK48_RS00210;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=HGK48_RS00210 NZ_JAATTN010000002.1 Protein Homology CDS 620 1060 . + 0 ID=cds-WP_002847904.1;Parent=gene-HGK48_RS00210;Dbxref=GenBank:WP_002847904.1;Name=WP_002847904.1;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847904.1;locus_tag=HGK48_RS00210;product=preQ(1) synthase;protein_id=WP_002847904.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 1070 2290 . + . ID=gene-HGK48_RS00215;Name=HGK48_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00215 NZ_JAATTN010000002.1 Protein Homology CDS 1070 2290 . + 0 ID=cds-WP_002847905.1;Parent=gene-HGK48_RS00215;Dbxref=GenBank:WP_002847905.1;Name=WP_002847905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731672.1;locus_tag=HGK48_RS00215;product=HD domain-containing protein;protein_id=WP_002847905.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 2295 2392 . - . ID=gene-HGK48_RS00220;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=HGK48_RS00220 NZ_JAATTN010000002.1 cmsearch SRP_RNA 2295 2392 . - . ID=rna-HGK48_RS00220;Parent=gene-HGK48_RS00220;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS00220;product=signal recognition particle sRNA small type NZ_JAATTN010000002.1 cmsearch exon 2295 2392 . - . ID=exon-HGK48_RS00220-1;Parent=rna-HGK48_RS00220;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS00220;product=signal recognition particle sRNA small type NZ_JAATTN010000002.1 RefSeq gene 2441 2863 . + . ID=gene-HGK48_RS00225;Name=HGK48_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00225 NZ_JAATTN010000002.1 Protein Homology CDS 2441 2863 . + 0 ID=cds-WP_002847911.1;Parent=gene-HGK48_RS00225;Dbxref=GenBank:WP_002847911.1;Name=WP_002847911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847911.1;locus_tag=HGK48_RS00225;product=hypothetical protein;protein_id=WP_002847911.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 2864 4504 . - . ID=gene-HGK48_RS00230;Name=HGK48_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00230 NZ_JAATTN010000002.1 Protein Homology CDS 2864 4504 . - 0 ID=cds-WP_024305262.1;Parent=gene-HGK48_RS00230;Dbxref=GenBank:WP_024305262.1;Name=WP_024305262.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03506.1;locus_tag=HGK48_RS00230;product=flagellar hook-basal body complex protein;protein_id=WP_024305262.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 4501 5292 . - . ID=gene-HGK48_RS00235;Name=HGK48_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00235 NZ_JAATTN010000002.1 Protein Homology CDS 4501 5292 . - 0 ID=cds-WP_002847913.1;Parent=gene-HGK48_RS00235;Dbxref=GenBank:WP_002847913.1;Name=WP_002847913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991611.1;locus_tag=HGK48_RS00235;product=flagellar basal body rod modification protein;protein_id=WP_002847913.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 5350 6951 . - . ID=gene-HGK48_RS00240;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=HGK48_RS00240 NZ_JAATTN010000002.1 Protein Homology CDS 5350 6951 . - 0 ID=cds-WP_011731675.1;Parent=gene-HGK48_RS00240;Dbxref=GenBank:WP_011731675.1;Name=WP_011731675.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011989458.1;locus_tag=HGK48_RS00240;product=flagellar hook-length control protein FliK;protein_id=WP_011731675.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 7111 8313 . + . ID=gene-HGK48_RS00245;Name=HGK48_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00245 NZ_JAATTN010000002.1 Protein Homology CDS 7111 8313 . + 0 ID=cds-WP_002847918.1;Parent=gene-HGK48_RS00245;Dbxref=GenBank:WP_002847918.1;Name=WP_002847918.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847918.1;locus_tag=HGK48_RS00245;product=multidrug effflux MFS transporter;protein_id=WP_002847918.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 8400 10208 . + . ID=gene-HGK48_RS00250;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=HGK48_RS00250 NZ_JAATTN010000002.1 Protein Homology CDS 8400 10208 . + 0 ID=cds-WP_002847920.1;Parent=gene-HGK48_RS00250;Dbxref=GenBank:WP_002847920.1;Name=WP_002847920.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002944071.1;locus_tag=HGK48_RS00250;product=translational GTPase TypA;protein_id=WP_002847920.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 10208 10891 . + . ID=gene-HGK48_RS00255;Name=HGK48_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00255 NZ_JAATTN010000002.1 GeneMarkS-2+ CDS 10208 10891 . + 0 ID=cds-WP_002847922.1;Parent=gene-HGK48_RS00255;Dbxref=GenBank:WP_002847922.1;Name=WP_002847922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00255;product=hypothetical protein;protein_id=WP_002847922.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 10932 11993 . - . ID=gene-HGK48_RS00260;Name=HGK48_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00260 NZ_JAATTN010000002.1 GeneMarkS-2+ CDS 10932 11993 . - 0 ID=cds-WP_002847924.1;Parent=gene-HGK48_RS00260;Dbxref=GenBank:WP_002847924.1;Name=WP_002847924.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00260;product=ATP-binding protein;protein_id=WP_002847924.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 12001 12570 . - . ID=gene-HGK48_RS00265;Name=HGK48_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00265 NZ_JAATTN010000002.1 Protein Homology CDS 12001 12570 . - 0 ID=cds-WP_002847926.1;Parent=gene-HGK48_RS00265;Dbxref=GenBank:WP_002847926.1;Name=WP_002847926.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847926.1;locus_tag=HGK48_RS00265;product=ribonuclease HII;protein_id=WP_002847926.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 12563 13540 . - . ID=gene-HGK48_RS00270;Name=HGK48_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00270 NZ_JAATTN010000002.1 Protein Homology CDS 12563 13540 . - 0 ID=cds-WP_002847933.1;Parent=gene-HGK48_RS00270;Dbxref=GenBank:WP_002847933.1;Name=WP_002847933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731677.1;locus_tag=HGK48_RS00270;product=DUF475 domain-containing protein;protein_id=WP_002847933.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 13676 14626 . + . ID=gene-HGK48_RS00275;Name=HGK48_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00275 NZ_JAATTN010000002.1 Protein Homology CDS 13676 14626 . + 0 ID=cds-WP_024305264.1;Parent=gene-HGK48_RS00275;Dbxref=GenBank:WP_024305264.1;Name=WP_024305264.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004276082.1;locus_tag=HGK48_RS00275;product=ABC transporter ATP-binding protein;protein_id=WP_024305264.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 14636 15265 . - . ID=gene-HGK48_RS00280;Name=HGK48_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00280 NZ_JAATTN010000002.1 Protein Homology CDS 14636 15265 . - 0 ID=cds-WP_002847937.1;Parent=gene-HGK48_RS00280;Dbxref=GenBank:WP_002847937.1;Name=WP_002847937.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF019843.6;locus_tag=HGK48_RS00280;product=tetratricopeptide repeat protein;protein_id=WP_002847937.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 15387 16331 . - . ID=gene-HGK48_RS00285;Name=HGK48_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00285 NZ_JAATTN010000002.1 Protein Homology CDS 15387 16331 . - 0 ID=cds-WP_002847938.1;Parent=gene-HGK48_RS00285;Dbxref=GenBank:WP_002847938.1;Name=WP_002847938.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:TIGR01297.1;locus_tag=HGK48_RS00285;product=cation diffusion facilitator family transporter;protein_id=WP_002847938.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 16651 18720 . + . ID=gene-HGK48_RS00290;Name=HGK48_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00290 NZ_JAATTN010000002.1 Protein Homology CDS 16651 18720 . + 0 ID=cds-WP_002847939.1;Parent=gene-HGK48_RS00290;Dbxref=GenBank:WP_002847939.1;Name=WP_002847939.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847939.1;locus_tag=HGK48_RS00290;product=ribonucleoside triphosphate reductase;protein_id=WP_002847939.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 18934 20298 . + . ID=gene-HGK48_RS00295;Name=HGK48_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00295 NZ_JAATTN010000002.1 Protein Homology CDS 18934 20298 . + 0 ID=cds-WP_002847940.1;Parent=gene-HGK48_RS00295;Dbxref=GenBank:WP_002847940.1;Name=WP_002847940.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731678.1;locus_tag=HGK48_RS00295;product=nicotinate phosphoribosyltransferase;protein_id=WP_002847940.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 20309 20470 . + . ID=gene-HGK48_RS00300;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=HGK48_RS00300 NZ_JAATTN010000002.1 Protein Homology CDS 20309 20470 . + 0 ID=cds-WP_011731679.1;Parent=gene-HGK48_RS00300;Dbxref=GenBank:WP_011731679.1;Name=WP_011731679.1;Ontology_term=GO:0006260,GO:0008998,GO:0016491;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA,oxidoreductase activity|0016491||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014768285.1;locus_tag=HGK48_RS00300;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_011731679.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 20464 21135 . + . ID=gene-HGK48_RS00305;Name=HGK48_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00305 NZ_JAATTN010000002.1 Protein Homology CDS 20464 21135 . + 0 ID=cds-WP_002847941.1;Parent=gene-HGK48_RS00305;Dbxref=GenBank:WP_002847941.1;Name=WP_002847941.1;Ontology_term=GO:0009265,GO:0051353,GO:0051539;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA,positive regulation of oxidoreductase activity|0051353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847941.1;locus_tag=HGK48_RS00305;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_002847941.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 21184 21732 . - . ID=gene-HGK48_RS00310;Name=cdtC;gbkey=Gene;gene=cdtC;gene_biotype=protein_coding;locus_tag=HGK48_RS00310 NZ_JAATTN010000002.1 Protein Homology CDS 21184 21732 . - 0 ID=cds-WP_011731680.1;Parent=gene-HGK48_RS00310;Dbxref=GenBank:WP_011731680.1;Name=WP_011731680.1;gbkey=CDS;gene=cdtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731680.1;locus_tag=HGK48_RS00310;product=cytolethal distending toxin subunit Cf-CdtC;protein_id=WP_011731680.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 21732 22532 . - . ID=gene-HGK48_RS00315;Name=cdtB;gbkey=Gene;gene=cdtB;gene_biotype=protein_coding;locus_tag=HGK48_RS00315 NZ_JAATTN010000002.1 Protein Homology CDS 21732 22532 . - 0 ID=cds-WP_002847942.1;Parent=gene-HGK48_RS00315;Dbxref=GenBank:WP_002847942.1;Name=WP_002847942.1;gbkey=CDS;gene=cdtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847942.1;locus_tag=HGK48_RS00315;product=cytolethal distending toxin nuclease subunit Cf-CdtB;protein_id=WP_002847942.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 22541 23362 . - . ID=gene-HGK48_RS00320;Name=cdtA;gbkey=Gene;gene=cdtA;gene_biotype=protein_coding;locus_tag=HGK48_RS00320 NZ_JAATTN010000002.1 Protein Homology CDS 22541 23362 . - 0 ID=cds-WP_002847943.1;Parent=gene-HGK48_RS00320;Dbxref=GenBank:WP_002847943.1;Name=WP_002847943.1;gbkey=CDS;gene=cdtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847943.1;locus_tag=HGK48_RS00320;product=cytolethal distending toxin subunit Cf-CdtA;protein_id=WP_002847943.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 23738 24226 . - . ID=gene-HGK48_RS00325;Name=HGK48_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00325 NZ_JAATTN010000002.1 Protein Homology CDS 23738 24226 . - 0 ID=cds-WP_002847945.1;Parent=gene-HGK48_RS00325;Dbxref=GenBank:WP_002847945.1;Name=WP_002847945.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018137350.1;locus_tag=HGK48_RS00325;product=type II secretion system protein;protein_id=WP_002847945.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 24394 25416 . + . ID=gene-HGK48_RS00330;Name=HGK48_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00330 NZ_JAATTN010000002.1 Protein Homology CDS 24394 25416 . + 0 ID=cds-WP_002847947.1;Parent=gene-HGK48_RS00330;Dbxref=GenBank:WP_002847947.1;Name=WP_002847947.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343674.1;locus_tag=HGK48_RS00330;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_002847947.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 25406 26068 . + . ID=gene-HGK48_RS00335;Name=HGK48_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00335 NZ_JAATTN010000002.1 Protein Homology CDS 25406 26068 . + 0 ID=cds-WP_011731682.1;Parent=gene-HGK48_RS00335;Dbxref=GenBank:WP_011731682.1;Name=WP_011731682.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012993.6;locus_tag=HGK48_RS00335;product=carbon-nitrogen hydrolase family protein;protein_id=WP_011731682.1;transl_table=11 NZ_JAATTN010000002.1 RefSeq gene 26126 26679 . + . ID=gene-HGK48_RS00340;Name=HGK48_RS00340;end_range=26679,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00340;partial=true NZ_JAATTN010000002.1 Protein Homology CDS 26126 26679 . + 0 ID=cds-WP_168236620.1;Parent=gene-HGK48_RS00340;Dbxref=GenBank:WP_168236620.1;Name=WP_168236620.1;Ontology_term=GO:0036211,GO:0004719;end_range=26679,.;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004321654.1;locus_tag=HGK48_RS00340;partial=true;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_168236620.1;transl_table=11 ##sequence-region NZ_JAATTN010000300.1 1 1882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000300.1 RefSeq region 1 1882 . + . ID=NZ_JAATTN010000300.1:1..1882;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000300.1 RefSeq gene 149 442 . + . ID=gene-HGK48_RS09785;Name=HGK48_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09785 NZ_JAATTN010000300.1 GeneMarkS-2+ CDS 149 442 . + 0 ID=cds-WP_065840831.1;Parent=gene-HGK48_RS09785;Dbxref=GenBank:WP_065840831.1;Name=WP_065840831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09785;product=hypothetical protein;protein_id=WP_065840831.1;transl_table=11 NZ_JAATTN010000300.1 RefSeq gene 439 1701 . - . ID=gene-HGK48_RS09790;Name=HGK48_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09790 NZ_JAATTN010000300.1 Protein Homology CDS 439 1701 . - 0 ID=cds-WP_065840832.1;Parent=gene-HGK48_RS09790;Dbxref=GenBank:WP_065840832.1;Name=WP_065840832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803292.1;locus_tag=HGK48_RS09790;product=DUF5710 domain-containing protein;protein_id=WP_065840832.1;transl_table=11 ##sequence-region NZ_JAATTN010000301.1 1 1882 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000301.1 RefSeq region 1 1882 . + . ID=NZ_JAATTN010000301.1:1..1882;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000301.1 RefSeq gene 10 549 . - . ID=gene-HGK48_RS09795;Name=HGK48_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09795 NZ_JAATTN010000301.1 Protein Homology CDS 10 549 . - 0 ID=cds-WP_002850012.1;Parent=gene-HGK48_RS09795;Dbxref=GenBank:WP_002850012.1;Name=WP_002850012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850012.1;locus_tag=HGK48_RS09795;product=DJ-1 family glyoxalase III;protein_id=WP_002850012.1;transl_table=11 NZ_JAATTN010000301.1 RefSeq gene 657 896 . + . ID=gene-HGK48_RS11410;Name=HGK48_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11410 NZ_JAATTN010000301.1 Protein Homology CDS 657 896 . + 0 ID=cds-WP_277346452.1;Parent=gene-HGK48_RS11410;Dbxref=GenBank:WP_277346452.1;Name=WP_277346452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_255349555.1;locus_tag=HGK48_RS11410;product=SelT/SelW/SelH family (seleno)protein;protein_id=WP_277346452.1;transl_except=(pos:687..689%2Caa:Sec);transl_table=11 NZ_JAATTN010000301.1 RefSeq gene 928 1497 . - . ID=gene-HGK48_RS09805;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=HGK48_RS09805 NZ_JAATTN010000301.1 Protein Homology CDS 928 1497 . - 0 ID=cds-WP_002850016.1;Parent=gene-HGK48_RS09805;Dbxref=GenBank:WP_002850016.1;Name=WP_002850016.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343982.1;locus_tag=HGK48_RS09805;product=elongation factor P;protein_id=WP_002850016.1;transl_table=11 NZ_JAATTN010000301.1 RefSeq gene 1512 1882 . - . ID=gene-HGK48_RS09810;Name=HGK48_RS09810;end_range=1882,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09810;partial=true NZ_JAATTN010000301.1 Protein Homology CDS 1512 1882 . - 2 ID=cds-WP_168236917.1;Parent=gene-HGK48_RS09810;Dbxref=GenBank:WP_168236917.1;Name=WP_168236917.1;end_range=1882,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850018.1;locus_tag=HGK48_RS09810;partial=true;product=ACT domain-containing protein;protein_id=WP_168236917.1;transl_table=11 ##sequence-region NZ_JAATTN010000302.1 1 1861 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000302.1 RefSeq region 1 1861 . + . ID=NZ_JAATTN010000302.1:1..1861;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000302.1 RefSeq gene 1 946 . - . ID=gene-HGK48_RS09815;Name=HGK48_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09815;partial=true;start_range=.,1 NZ_JAATTN010000302.1 Protein Homology CDS 1 946 . - 0 ID=cds-WP_168236918.1;Parent=gene-HGK48_RS09815;Dbxref=GenBank:WP_168236918.1;Name=WP_168236918.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015552.6;locus_tag=HGK48_RS09815;partial=true;product=SLAC1 anion channel family protein;protein_id=WP_168236918.1;start_range=.,1;transl_table=11 NZ_JAATTN010000302.1 RefSeq gene 1096 1713 . - . ID=gene-HGK48_RS09820;Name=HGK48_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09820 NZ_JAATTN010000302.1 Protein Homology CDS 1096 1713 . - 0 ID=cds-WP_002849432.1;Parent=gene-HGK48_RS09820;Dbxref=GenBank:WP_002849432.1;Name=WP_002849432.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012001635.1;locus_tag=HGK48_RS09820;product=HAD family hydrolase;protein_id=WP_002849432.1;transl_table=11 ##sequence-region NZ_JAATTN010000303.1 1 1769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000303.1 RefSeq region 1 1769 . + . ID=NZ_JAATTN010000303.1:1..1769;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000303.1 RefSeq gene 31 1626 . - . ID=gene-HGK48_RS09830;Name=HGK48_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09830 NZ_JAATTN010000303.1 Protein Homology CDS 31 1626 . - 0 ID=cds-WP_002848144.1;Parent=gene-HGK48_RS09830;Dbxref=GenBank:WP_002848144.1;Name=WP_002848144.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002881261.1;locus_tag=HGK48_RS09830;product=L-lactate permease;protein_id=WP_002848144.1;transl_table=11 ##sequence-region NZ_JAATTN010000304.1 1 1841 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000304.1 RefSeq region 1 1841 . + . ID=NZ_JAATTN010000304.1:1..1841;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000304.1 RefSeq pseudogene 1 324 . - . ID=gene-HGK48_RS09835;Name=HGK48_RS09835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09835;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000304.1 Protein Homology CDS 1 324 . - 0 ID=cds-HGK48_RS09835;Parent=gene-HGK48_RS09835;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849699.1;locus_tag=HGK48_RS09835;partial=true;product=aminodeoxychorismate synthase component I;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000304.1 RefSeq gene 351 623 . - . ID=gene-HGK48_RS09840;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=HGK48_RS09840 NZ_JAATTN010000304.1 Protein Homology CDS 351 623 . - 0 ID=cds-WP_002849698.1;Parent=gene-HGK48_RS09840;Dbxref=GenBank:WP_002849698.1;Name=WP_002849698.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344284.1;locus_tag=HGK48_RS09840;product=30S ribosomal protein S15;protein_id=WP_002849698.1;transl_table=11 NZ_JAATTN010000304.1 RefSeq gene 795 1199 . + . ID=gene-HGK48_RS09845;Name=HGK48_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09845 NZ_JAATTN010000304.1 Protein Homology CDS 795 1199 . + 0 ID=cds-WP_002849697.1;Parent=gene-HGK48_RS09845;Dbxref=GenBank:WP_002849697.1;Name=WP_002849697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849697.1;locus_tag=HGK48_RS09845;product=Rrf2 family transcriptional regulator;protein_id=WP_002849697.1;transl_table=11 NZ_JAATTN010000304.1 RefSeq gene 1226 1841 . + . ID=gene-HGK48_RS09850;Name=HGK48_RS09850;end_range=1841,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09850;partial=true NZ_JAATTN010000304.1 Protein Homology CDS 1226 1841 . + 0 ID=cds-WP_394352689.1;Parent=gene-HGK48_RS09850;Dbxref=GenBank:WP_394352689.1;Name=WP_394352689.1;Ontology_term=GO:0009306,GO:0016020;end_range=1841,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849696.1;locus_tag=HGK48_RS09850;partial=true;product=FHIPEP family type III secretion protein;protein_id=WP_394352689.1;transl_table=11 ##sequence-region NZ_JAATTN010000305.1 1 1759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000305.1 RefSeq region 1 1759 . + . ID=NZ_JAATTN010000305.1:1..1759;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000305.1 RefSeq pseudogene 1 586 . - . ID=gene-HGK48_RS09855;Name=HGK48_RS09855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS09855;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000305.1 Protein Homology CDS 1 586 . - 0 ID=cds-HGK48_RS09855;Parent=gene-HGK48_RS09855;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732287.1;locus_tag=HGK48_RS09855;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000305.1 RefSeq gene 561 728 . - . ID=gene-HGK48_RS09860;Name=HGK48_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09860 NZ_JAATTN010000305.1 Protein Homology CDS 561 728 . - 0 ID=cds-WP_162832103.1;Parent=gene-HGK48_RS09860;Dbxref=GenBank:WP_162832103.1;Name=WP_162832103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732286.1;locus_tag=HGK48_RS09860;product=hypothetical protein;protein_id=WP_162832103.1;transl_table=11 NZ_JAATTN010000305.1 RefSeq gene 738 1759 . - . ID=gene-HGK48_RS09865;Name=HGK48_RS09865;end_range=1759,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09865;partial=true NZ_JAATTN010000305.1 GeneMarkS-2+ CDS 738 1759 . - 2 ID=cds-WP_168236919.1;Parent=gene-HGK48_RS09865;Dbxref=GenBank:WP_168236919.1;Name=WP_168236919.1;end_range=1759,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09865;partial=true;product=hypothetical protein;protein_id=WP_168236919.1;transl_table=11 ##sequence-region NZ_JAATTN010000306.1 1 1826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000306.1 RefSeq region 1 1826 . + . ID=NZ_JAATTN010000306.1:1..1826;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000306.1 RefSeq gene 35 433 . + . ID=gene-HGK48_RS09870;Name=HGK48_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09870 NZ_JAATTN010000306.1 Protein Homology CDS 35 433 . + 0 ID=cds-WP_029662399.1;Parent=gene-HGK48_RS09870;Dbxref=GenBank:WP_029662399.1;Name=WP_029662399.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849166.1;locus_tag=HGK48_RS09870;product=CoA-binding protein;protein_id=WP_029662399.1;transl_table=11 NZ_JAATTN010000306.1 RefSeq gene 417 1628 . + . ID=gene-HGK48_RS09875;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=HGK48_RS09875 NZ_JAATTN010000306.1 Protein Homology CDS 417 1628 . + 0 ID=cds-WP_011731934.1;Parent=gene-HGK48_RS09875;Dbxref=GenBank:WP_011731934.1;Name=WP_011731934.1;Ontology_term=GO:0006567,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002780366.1;locus_tag=HGK48_RS09875;product=threonine ammonia-lyase;protein_id=WP_011731934.1;transl_table=11 ##sequence-region NZ_JAATTN010000307.1 1 1826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000307.1 RefSeq region 1 1826 . + . ID=NZ_JAATTN010000307.1:1..1826;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000307.1 RefSeq pseudogene 1 189 . - . ID=gene-HGK48_RS11315;Name=HGK48_RS11315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11315;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000307.1 Protein Homology CDS 1 189 . - 0 ID=cds-HGK48_RS11315;Parent=gene-HGK48_RS11315;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849885.1;locus_tag=HGK48_RS11315;partial=true;product=cell division protein FtsX;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000307.1 RefSeq gene 176 847 . - . ID=gene-HGK48_RS09885;Name=HGK48_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09885 NZ_JAATTN010000307.1 Protein Homology CDS 176 847 . - 0 ID=cds-WP_011732124.1;Parent=gene-HGK48_RS09885;Dbxref=GenBank:WP_011732124.1;Name=WP_011732124.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002853534.1;locus_tag=HGK48_RS09885;product=cell division ATP-binding protein FtsE;protein_id=WP_011732124.1;transl_table=11 NZ_JAATTN010000307.1 RefSeq gene 832 1826 . - . ID=gene-HGK48_RS09890;Name=trmB;end_range=1826,.;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=HGK48_RS09890;partial=true NZ_JAATTN010000307.1 Protein Homology CDS 832 1826 . - 2 ID=cds-WP_168236920.1;Parent=gene-HGK48_RS09890;Dbxref=GenBank:WP_168236920.1;Name=WP_168236920.1;Ontology_term=GO:0006400,GO:0008176;end_range=1826,.;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849909.1;locus_tag=HGK48_RS09890;partial=true;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_168236920.1;transl_table=11 ##sequence-region NZ_JAATTN010000308.1 1 1793 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000308.1 RefSeq region 1 1793 . + . ID=NZ_JAATTN010000308.1:1..1793;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000308.1 RefSeq gene 641 1708 . - . ID=gene-HGK48_RS09895;Name=HGK48_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09895 NZ_JAATTN010000308.1 Protein Homology CDS 641 1708 . - 0 ID=cds-WP_002848433.1;Parent=gene-HGK48_RS09895;Dbxref=GenBank:WP_002848433.1;Name=WP_002848433.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848433.1;locus_tag=HGK48_RS09895;product=epoxyqueuosine reductase QueH;protein_id=WP_002848433.1;transl_table=11 ##sequence-region NZ_JAATTN010000309.1 1 1791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000309.1 RefSeq region 1 1791 . + . ID=NZ_JAATTN010000309.1:1..1791;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000309.1 RefSeq gene 1 411 . - . ID=gene-HGK48_RS09900;Name=HGK48_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09900;partial=true;start_range=.,1 NZ_JAATTN010000309.1 Protein Homology CDS 1 411 . - 0 ID=cds-WP_168236921.1;Parent=gene-HGK48_RS09900;Dbxref=GenBank:WP_168236921.1;Name=WP_168236921.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849031.1;locus_tag=HGK48_RS09900;partial=true;product=LysE family translocator;protein_id=WP_168236921.1;start_range=.,1;transl_table=11 NZ_JAATTN010000309.1 RefSeq gene 421 1791 . - . ID=gene-HGK48_RS09905;Name=HGK48_RS09905;end_range=1791,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09905;partial=true NZ_JAATTN010000309.1 Protein Homology CDS 421 1791 . - 0 ID=cds-WP_206120331.1;Parent=gene-HGK48_RS09905;Dbxref=GenBank:WP_206120331.1;Name=WP_206120331.1;Ontology_term=GO:0071111;end_range=1791,.;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: protein motif:HMM:NF012772.6;locus_tag=HGK48_RS09905;partial=true;product=EAL domain-containing protein;protein_id=WP_206120331.1;transl_table=11 ##sequence-region NZ_JAATTN010000030.1 1 11620 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000030.1 RefSeq region 1 11620 . + . ID=NZ_JAATTN010000030.1:1..11620;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000030.1 RefSeq gene 210 380 . + . ID=gene-HGK48_RS02690;Name=HGK48_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02690 NZ_JAATTN010000030.1 GeneMarkS-2+ CDS 210 380 . + 0 ID=cds-WP_002847863.1;Parent=gene-HGK48_RS02690;Dbxref=GenBank:WP_002847863.1;Name=WP_002847863.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02690;product=hypothetical protein;protein_id=WP_002847863.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 450 884 . + . ID=gene-HGK48_RS02695;Name=HGK48_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02695 NZ_JAATTN010000030.1 Protein Homology CDS 450 884 . + 0 ID=cds-WP_002847862.1;Parent=gene-HGK48_RS02695;Dbxref=GenBank:WP_002847862.1;Name=WP_002847862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847862.1;locus_tag=HGK48_RS02695;product=HvfX family Cu-binding RiPP maturation protein;protein_id=WP_002847862.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 874 1395 . + . ID=gene-HGK48_RS02700;Name=HGK48_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02700 NZ_JAATTN010000030.1 Protein Homology CDS 874 1395 . + 0 ID=cds-WP_002847860.1;Parent=gene-HGK48_RS02700;Dbxref=GenBank:WP_002847860.1;Name=WP_002847860.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025004.6;locus_tag=HGK48_RS02700;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=WP_002847860.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 1423 3072 . + . ID=gene-HGK48_RS02705;Name=HGK48_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02705 NZ_JAATTN010000030.1 Protein Homology CDS 1423 3072 . + 0 ID=cds-WP_002847859.1;Parent=gene-HGK48_RS02705;Dbxref=GenBank:WP_002847859.1;Name=WP_002847859.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732348.1;locus_tag=HGK48_RS02705;product=GMC family oxidoreductase;protein_id=WP_002847859.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 3107 3727 . + . ID=gene-HGK48_RS02710;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=HGK48_RS02710 NZ_JAATTN010000030.1 Protein Homology CDS 3107 3727 . + 0 ID=cds-WP_002847858.1;Parent=gene-HGK48_RS02710;Dbxref=GenBank:WP_002847858.1;Name=WP_002847858.1;Ontology_term=GO:0006231,GO:0050660,GO:0050797;gbkey=CDS;gene=thyX;go_function=flavin adenine dinucleotide binding|0050660||IEA,thymidylate synthase (FAD) activity|0050797||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847858.1;locus_tag=HGK48_RS02710;product=FAD-dependent thymidylate synthase;protein_id=WP_002847858.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 4254 4580 . + . ID=gene-HGK48_RS02715;Name=HGK48_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02715 NZ_JAATTN010000030.1 Protein Homology CDS 4254 4580 . + 0 ID=cds-WP_002847857.1;Parent=gene-HGK48_RS02715;Dbxref=GenBank:WP_002847857.1;Name=WP_002847857.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847857.1;locus_tag=HGK48_RS02715;product=phage tail assembly protein;protein_id=WP_002847857.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 4997 5197 . + . ID=gene-HGK48_RS02720;Name=HGK48_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02720 NZ_JAATTN010000030.1 GeneMarkS-2+ CDS 4997 5197 . + 0 ID=cds-WP_134853844.1;Parent=gene-HGK48_RS02720;Dbxref=GenBank:WP_134853844.1;Name=WP_134853844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02720;product=hypothetical protein;protein_id=WP_134853844.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 5233 5421 . - . ID=gene-HGK48_RS02725;Name=HGK48_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02725 NZ_JAATTN010000030.1 GeneMarkS-2+ CDS 5233 5421 . - 0 ID=cds-WP_168236667.1;Parent=gene-HGK48_RS02725;Dbxref=GenBank:WP_168236667.1;Name=WP_168236667.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02725;product=hypothetical protein;protein_id=WP_168236667.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 5470 5802 . + . ID=gene-HGK48_RS02730;Name=HGK48_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02730 NZ_JAATTN010000030.1 GeneMarkS-2+ CDS 5470 5802 . + 0 ID=cds-WP_002847848.1;Parent=gene-HGK48_RS02730;Dbxref=GenBank:WP_002847848.1;Name=WP_002847848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02730;product=hypothetical protein;protein_id=WP_002847848.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 5858 6130 . + . ID=gene-HGK48_RS02735;Name=HGK48_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02735 NZ_JAATTN010000030.1 Protein Homology CDS 5858 6130 . + 0 ID=cds-WP_002847846.1;Parent=gene-HGK48_RS02735;Dbxref=GenBank:WP_002847846.1;Name=WP_002847846.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: protein motif:HMM:NF024094.6;locus_tag=HGK48_RS02735;product=flavodoxin;protein_id=WP_002847846.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 6186 6767 . - . ID=gene-HGK48_RS02740;Name=HGK48_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02740 NZ_JAATTN010000030.1 Protein Homology CDS 6186 6767 . - 0 ID=cds-WP_002847844.1;Parent=gene-HGK48_RS02740;Dbxref=GenBank:WP_002847844.1;Name=WP_002847844.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847844.1;locus_tag=HGK48_RS02740;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_002847844.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 7100 7264 . + . ID=gene-HGK48_RS02745;Name=HGK48_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02745 NZ_JAATTN010000030.1 GeneMarkS-2+ CDS 7100 7264 . + 0 ID=cds-WP_155104980.1;Parent=gene-HGK48_RS02745;Dbxref=GenBank:WP_155104980.1;Name=WP_155104980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02745;product=cupin domain-containing protein;protein_id=WP_155104980.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 7378 7626 . + . ID=gene-HGK48_RS02750;Name=HGK48_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02750 NZ_JAATTN010000030.1 GeneMarkS-2+ CDS 7378 7626 . + 0 ID=cds-WP_024305300.1;Parent=gene-HGK48_RS02750;Dbxref=GenBank:WP_024305300.1;Name=WP_024305300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02750;product=hypothetical protein;protein_id=WP_024305300.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 8005 11205 . - . ID=gene-HGK48_RS02755;Name=HGK48_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02755 NZ_JAATTN010000030.1 Protein Homology CDS 8005 11205 . - 0 ID=cds-WP_002847840.1;Parent=gene-HGK48_RS02755;Dbxref=GenBank:WP_002847840.1;Name=WP_002847840.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.6;locus_tag=HGK48_RS02755;product=S8 family peptidase;protein_id=WP_002847840.1;transl_table=11 NZ_JAATTN010000030.1 RefSeq gene 11408 11483 . - . ID=gene-HGK48_RS02760;Name=HGK48_RS02760;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS02760 NZ_JAATTN010000030.1 tRNAscan-SE tRNA 11408 11483 . - . ID=rna-HGK48_RS02760;Parent=gene-HGK48_RS02760;anticodon=(pos:complement(11448..11450));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS02760;product=tRNA-Ala NZ_JAATTN010000030.1 tRNAscan-SE exon 11408 11483 . - . ID=exon-HGK48_RS02760-1;Parent=rna-HGK48_RS02760;anticodon=(pos:complement(11448..11450));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS02760;product=tRNA-Ala ##sequence-region NZ_JAATTN010000310.1 1 1661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000310.1 RefSeq region 1 1661 . + . ID=NZ_JAATTN010000310.1:1..1661;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000310.1 RefSeq gene 1 273 . - . ID=gene-HGK48_RS09910;Name=HGK48_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09910;partial=true;start_range=.,1 NZ_JAATTN010000310.1 Protein Homology CDS 1 273 . - 0 ID=cds-WP_277346453.1;Parent=gene-HGK48_RS09910;Dbxref=GenBank:WP_277346453.1;Name=WP_277346453.1;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731695.1;locus_tag=HGK48_RS09910;partial=true;product=sugar phosphate nucleotidyltransferase;protein_id=WP_277346453.1;start_range=.,1;transl_table=11 NZ_JAATTN010000310.1 RefSeq gene 270 1637 . - . ID=gene-HGK48_RS09915;Name=HGK48_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09915 NZ_JAATTN010000310.1 Protein Homology CDS 270 1637 . - 0 ID=cds-WP_002848091.1;Parent=gene-HGK48_RS09915;Dbxref=GenBank:WP_002848091.1;Name=WP_002848091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848091.1;locus_tag=HGK48_RS09915;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_002848091.1;transl_table=11 ##sequence-region NZ_JAATTN010000311.1 1 1583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000311.1 RefSeq region 1 1583 . + . ID=NZ_JAATTN010000311.1:1..1583;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000311.1 RefSeq gene 222 425 . + . ID=gene-HGK48_RS09925;Name=HGK48_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09925 NZ_JAATTN010000311.1 Protein Homology CDS 222 425 . + 0 ID=cds-WP_002850560.1;Parent=gene-HGK48_RS09925;Dbxref=GenBank:WP_002850560.1;Name=WP_002850560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850560.1;locus_tag=HGK48_RS09925;product=twin-arginine translocation signal domain-containing protein;protein_id=WP_002850560.1;transl_table=11 NZ_JAATTN010000311.1 RefSeq gene 436 1583 . + . ID=gene-HGK48_RS11320;Name=HGK48_RS11320;end_range=1583,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11320;partial=true NZ_JAATTN010000311.1 Protein Homology CDS 436 1583 . + 0 ID=cds-WP_240944844.1;Parent=gene-HGK48_RS11320;Dbxref=GenBank:WP_240944844.1;Name=WP_240944844.1;Ontology_term=GO:0016491;end_range=1583,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014770341.1;locus_tag=HGK48_RS11320;partial=true;product=molybdopterin-dependent oxidoreductase;protein_id=WP_240944844.1;transl_except=(pos:970..972%2Caa:Sec);transl_table=11 ##sequence-region NZ_JAATTN010000312.1 1 1654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000312.1 RefSeq region 1 1654 . + . ID=NZ_JAATTN010000312.1:1..1654;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000312.1 RefSeq gene 247 1527 . + . ID=gene-HGK48_RS09940;Name=HGK48_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09940 NZ_JAATTN010000312.1 Protein Homology CDS 247 1527 . + 0 ID=cds-WP_002849997.1;Parent=gene-HGK48_RS09940;Dbxref=GenBank:WP_002849997.1;Name=WP_002849997.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849997.1;locus_tag=HGK48_RS09940;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_002849997.1;transl_table=11 ##sequence-region NZ_JAATTN010000313.1 1 1646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000313.1 RefSeq region 1 1646 . + . ID=NZ_JAATTN010000313.1:1..1646;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000313.1 RefSeq gene 157 1494 . + . ID=gene-HGK48_RS09945;Name=HGK48_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09945 NZ_JAATTN010000313.1 Protein Homology CDS 157 1494 . + 0 ID=cds-WP_002850723.1;Parent=gene-HGK48_RS09945;Dbxref=GenBank:WP_002850723.1;Name=WP_002850723.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732297.1;locus_tag=HGK48_RS09945;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_002850723.1;transl_table=11 ##sequence-region NZ_JAATTN010000314.1 1 1645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000314.1 RefSeq region 1 1645 . + . ID=NZ_JAATTN010000314.1:1..1645;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000314.1 RefSeq gene 1 1645 . + . ID=gene-HGK48_RS09950;Name=HGK48_RS09950;end_range=1645,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09950;partial=true;start_range=.,1 NZ_JAATTN010000314.1 Protein Homology CDS 1 1645 . + 1 ID=cds-WP_168236924.1;Parent=gene-HGK48_RS09950;Dbxref=GenBank:WP_168236924.1;Name=WP_168236924.1;end_range=1645,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF010487.0;locus_tag=HGK48_RS09950;partial=true;product=RecB-like helicase;protein_id=WP_168236924.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000315.1 1 1621 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000315.1 RefSeq region 1 1621 . + . ID=NZ_JAATTN010000315.1:1..1621;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000315.1 RefSeq gene 1 1588 . - . ID=gene-HGK48_RS09955;Name=HGK48_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09955;partial=true;start_range=.,1 NZ_JAATTN010000315.1 GeneMarkS-2+ CDS 1 1588 . - 0 ID=cds-WP_394352690.1;Parent=gene-HGK48_RS09955;Dbxref=GenBank:WP_394352690.1;Name=WP_394352690.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09955;partial=true;product=beta strand repeat-containing protein;protein_id=WP_394352690.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000316.1 1 1523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000316.1 RefSeq region 1 1523 . + . ID=NZ_JAATTN010000316.1:1..1523;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000316.1 RefSeq gene 223 1053 . - . ID=gene-HGK48_RS09960;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=HGK48_RS09960 NZ_JAATTN010000316.1 Protein Homology CDS 223 1053 . - 0 ID=cds-WP_002848622.1;Parent=gene-HGK48_RS09960;Dbxref=GenBank:WP_002848622.1;Name=WP_002848622.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848622.1;locus_tag=HGK48_RS09960;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002848622.1;transl_table=11 NZ_JAATTN010000316.1 RefSeq gene 1046 1523 . - . ID=gene-HGK48_RS09965;Name=HGK48_RS09965;end_range=1523,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09965;partial=true NZ_JAATTN010000316.1 GeneMarkS-2+ CDS 1046 1523 . - 1 ID=cds-WP_168236925.1;Parent=gene-HGK48_RS09965;Dbxref=GenBank:WP_168236925.1;Name=WP_168236925.1;end_range=1523,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09965;partial=true;product=hypothetical protein;protein_id=WP_168236925.1;transl_table=11 ##sequence-region NZ_JAATTN010000317.1 1 1606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000317.1 RefSeq region 1 1606 . + . ID=NZ_JAATTN010000317.1:1..1606;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000317.1 RefSeq gene 3 299 . + . ID=gene-HGK48_RS09970;Name=HGK48_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09970 NZ_JAATTN010000317.1 Protein Homology CDS 3 299 . + 0 ID=cds-WP_338153895.1;Parent=gene-HGK48_RS09970;Dbxref=GenBank:WP_338153895.1;Name=WP_338153895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732073.1;locus_tag=HGK48_RS09970;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_338153895.1;transl_table=11 NZ_JAATTN010000317.1 RefSeq gene 347 1423 . + . ID=gene-HGK48_RS09975;Name=HGK48_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09975 NZ_JAATTN010000317.1 Protein Homology CDS 347 1423 . + 0 ID=cds-WP_167497339.1;Parent=gene-HGK48_RS09975;Dbxref=GenBank:WP_167497339.1;Name=WP_167497339.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=HGK48_RS09975;product=GGDEF domain-containing protein;protein_id=WP_167497339.1;transl_table=11 NZ_JAATTN010000317.1 RefSeq gene 1407 1606 . + . ID=gene-HGK48_RS09980;Name=HGK48_RS09980;end_range=1606,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09980;partial=true NZ_JAATTN010000317.1 GeneMarkS-2+ CDS 1407 1606 . + 0 ID=cds-WP_168236927.1;Parent=gene-HGK48_RS09980;Dbxref=GenBank:WP_168236927.1;Name=WP_168236927.1;end_range=1606,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09980;partial=true;product=hypothetical protein;protein_id=WP_168236927.1;transl_table=11 ##sequence-region NZ_JAATTN010000318.1 1 1570 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000318.1 RefSeq region 1 1570 . + . ID=NZ_JAATTN010000318.1:1..1570;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000318.1 RefSeq gene 156 1570 . + . ID=gene-HGK48_RS09985;Name=aspA;end_range=1570,.;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=HGK48_RS09985;partial=true NZ_JAATTN010000318.1 Protein Homology CDS 156 1570 . + 0 ID=cds-WP_168236928.1;Parent=gene-HGK48_RS09985;Dbxref=GenBank:WP_168236928.1;Name=WP_168236928.1;Ontology_term=GO:0006520,GO:0008797;end_range=1570,.;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011115564.1;locus_tag=HGK48_RS09985;partial=true;product=aspartate ammonia-lyase;protein_id=WP_168236928.1;transl_table=11 ##sequence-region NZ_JAATTN010000319.1 1 1516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000319.1 RefSeq region 1 1516 . + . ID=NZ_JAATTN010000319.1:1..1516;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000319.1 RefSeq gene 113 1063 . - . ID=gene-HGK48_RS09990;Name=HGK48_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09990 NZ_JAATTN010000319.1 GeneMarkS-2+ CDS 113 1063 . - 0 ID=cds-WP_168236929.1;Parent=gene-HGK48_RS09990;Dbxref=GenBank:WP_168236929.1;Name=WP_168236929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS09990;product=calcium-binding protein;protein_id=WP_168236929.1;transl_table=11 NZ_JAATTN010000319.1 RefSeq gene 1131 1511 . + . ID=gene-HGK48_RS09995;Name=HGK48_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS09995 NZ_JAATTN010000319.1 Protein Homology CDS 1131 1511 . + 0 ID=cds-WP_168236930.1;Parent=gene-HGK48_RS09995;Dbxref=GenBank:WP_168236930.1;Name=WP_168236930.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015581.6;locus_tag=HGK48_RS09995;product=DUF302 domain-containing protein;protein_id=WP_168236930.1;transl_table=11 ##sequence-region NZ_JAATTN010000031.1 1 11459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000031.1 RefSeq region 1 11459 . + . ID=NZ_JAATTN010000031.1:1..11459;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000031.1 RefSeq gene 153 500 . - . ID=gene-HGK48_RS02765;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=HGK48_RS02765 NZ_JAATTN010000031.1 Protein Homology CDS 153 500 . - 0 ID=cds-WP_002848041.1;Parent=gene-HGK48_RS02765;Dbxref=GenBank:WP_002848041.1;Name=WP_002848041.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848041.1;locus_tag=HGK48_RS02765;product=aspartate 1-decarboxylase;protein_id=WP_002848041.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 520 1809 . - . ID=gene-HGK48_RS02770;Name=HGK48_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02770 NZ_JAATTN010000031.1 Protein Homology CDS 520 1809 . - 0 ID=cds-WP_002848040.1;Parent=gene-HGK48_RS02770;Dbxref=GenBank:WP_002848040.1;Name=WP_002848040.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848040.1;locus_tag=HGK48_RS02770;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_002848040.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 1790 2338 . - . ID=gene-HGK48_RS02775;Name=HGK48_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02775 NZ_JAATTN010000031.1 GeneMarkS-2+ CDS 1790 2338 . - 0 ID=cds-WP_002848039.1;Parent=gene-HGK48_RS02775;Dbxref=GenBank:WP_002848039.1;Name=WP_002848039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02775;product=hypothetical protein;protein_id=WP_002848039.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 2328 2594 . - . ID=gene-HGK48_RS02780;Name=HGK48_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02780 NZ_JAATTN010000031.1 Protein Homology CDS 2328 2594 . - 0 ID=cds-WP_002848038.1;Parent=gene-HGK48_RS02780;Dbxref=GenBank:WP_002848038.1;Name=WP_002848038.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848038.1;locus_tag=HGK48_RS02780;product=NifU family protein;protein_id=WP_002848038.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 2819 3175 . - . ID=gene-HGK48_RS02785;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=HGK48_RS02785 NZ_JAATTN010000031.1 Protein Homology CDS 2819 3175 . - 0 ID=cds-WP_002848037.1;Parent=gene-HGK48_RS02785;Dbxref=GenBank:WP_002848037.1;Name=WP_002848037.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848037.1;locus_tag=HGK48_RS02785;product=50S ribosomal protein L17;protein_id=WP_002848037.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 3194 4192 . - . ID=gene-HGK48_RS02790;Name=HGK48_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02790 NZ_JAATTN010000031.1 Protein Homology CDS 3194 4192 . - 0 ID=cds-WP_002848036.1;Parent=gene-HGK48_RS02790;Dbxref=GenBank:WP_002848036.1;Name=WP_002848036.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848036.1;locus_tag=HGK48_RS02790;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002848036.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 4205 4831 . - . ID=gene-HGK48_RS02795;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=HGK48_RS02795 NZ_JAATTN010000031.1 Protein Homology CDS 4205 4831 . - 0 ID=cds-WP_002848035.1;Parent=gene-HGK48_RS02795;Dbxref=GenBank:WP_002848035.1;Name=WP_002848035.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002856574.1;locus_tag=HGK48_RS02795;product=30S ribosomal protein S4;protein_id=WP_002848035.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 4859 5251 . - . ID=gene-HGK48_RS02800;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=HGK48_RS02800 NZ_JAATTN010000031.1 Protein Homology CDS 4859 5251 . - 0 ID=cds-WP_002848034.1;Parent=gene-HGK48_RS02800;Dbxref=GenBank:WP_002848034.1;Name=WP_002848034.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344962.1;locus_tag=HGK48_RS02800;product=30S ribosomal protein S11;protein_id=WP_002848034.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 5261 5629 . - . ID=gene-HGK48_RS02805;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=HGK48_RS02805 NZ_JAATTN010000031.1 Protein Homology CDS 5261 5629 . - 0 ID=cds-WP_002848033.1;Parent=gene-HGK48_RS02805;Dbxref=GenBank:WP_002848033.1;Name=WP_002848033.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009494839.1;locus_tag=HGK48_RS02805;product=30S ribosomal protein S13;protein_id=WP_002848033.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 5633 5746 . - . ID=gene-HGK48_RS02810;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=HGK48_RS02810 NZ_JAATTN010000031.1 Protein Homology CDS 5633 5746 . - 0 ID=cds-WP_002848032.1;Parent=gene-HGK48_RS02810;Dbxref=GenBank:WP_002848032.1;Name=WP_002848032.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015896560.1;locus_tag=HGK48_RS02810;product=50S ribosomal protein L36;protein_id=WP_002848032.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 5906 6124 . - . ID=gene-HGK48_RS02815;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=HGK48_RS02815 NZ_JAATTN010000031.1 Protein Homology CDS 5906 6124 . - 0 ID=cds-WP_002848031.1;Parent=gene-HGK48_RS02815;Dbxref=GenBank:WP_002848031.1;Name=WP_002848031.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344959.1;locus_tag=HGK48_RS02815;product=translation initiation factor IF-1;protein_id=WP_002848031.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 6373 7131 . - . ID=gene-HGK48_RS02820;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=HGK48_RS02820 NZ_JAATTN010000031.1 Protein Homology CDS 6373 7131 . - 0 ID=cds-WP_002848003.1;Parent=gene-HGK48_RS02820;Dbxref=GenBank:WP_002848003.1;Name=WP_002848003.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848003.1;locus_tag=HGK48_RS02820;product=type I methionyl aminopeptidase;protein_id=WP_002848003.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 7133 8395 . - . ID=gene-HGK48_RS02825;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=HGK48_RS02825 NZ_JAATTN010000031.1 Protein Homology CDS 7133 8395 . - 0 ID=cds-WP_002848001.1;Parent=gene-HGK48_RS02825;Dbxref=GenBank:WP_002848001.1;Name=WP_002848001.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345054.1;locus_tag=HGK48_RS02825;product=preprotein translocase subunit SecY;protein_id=WP_002848001.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 8395 8796 . - . ID=gene-HGK48_RS02830;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=HGK48_RS02830 NZ_JAATTN010000031.1 Protein Homology CDS 8395 8796 . - 0 ID=cds-WP_010402709.1;Parent=gene-HGK48_RS02830;Dbxref=GenBank:WP_010402709.1;Name=WP_010402709.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016646181.1;locus_tag=HGK48_RS02830;product=50S ribosomal protein L15;protein_id=WP_010402709.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 8806 9249 . - . ID=gene-HGK48_RS02835;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=HGK48_RS02835 NZ_JAATTN010000031.1 Protein Homology CDS 8806 9249 . - 0 ID=cds-WP_002847997.1;Parent=gene-HGK48_RS02835;Dbxref=GenBank:WP_002847997.1;Name=WP_002847997.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345056.1;locus_tag=HGK48_RS02835;product=30S ribosomal protein S5;protein_id=WP_002847997.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 9264 9620 . - . ID=gene-HGK48_RS02840;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=HGK48_RS02840 NZ_JAATTN010000031.1 Protein Homology CDS 9264 9620 . - 0 ID=cds-WP_002847994.1;Parent=gene-HGK48_RS02840;Dbxref=GenBank:WP_002847994.1;Name=WP_002847994.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016818303.1;locus_tag=HGK48_RS02840;product=50S ribosomal protein L18;protein_id=WP_002847994.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 9630 10166 . - . ID=gene-HGK48_RS02845;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=HGK48_RS02845 NZ_JAATTN010000031.1 Protein Homology CDS 9630 10166 . - 0 ID=cds-WP_002847992.1;Parent=gene-HGK48_RS02845;Dbxref=GenBank:WP_002847992.1;Name=WP_002847992.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345058.1;locus_tag=HGK48_RS02845;product=50S ribosomal protein L6;protein_id=WP_002847992.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 10288 10683 . - . ID=gene-HGK48_RS02850;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=HGK48_RS02850 NZ_JAATTN010000031.1 Protein Homology CDS 10288 10683 . - 0 ID=cds-WP_002847989.1;Parent=gene-HGK48_RS02850;Dbxref=GenBank:WP_002847989.1;Name=WP_002847989.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345059.1;locus_tag=HGK48_RS02850;product=30S ribosomal protein S8;protein_id=WP_002847989.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 10694 10879 . - . ID=gene-HGK48_RS02855;Name=HGK48_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02855 NZ_JAATTN010000031.1 Protein Homology CDS 10694 10879 . - 0 ID=cds-WP_002847988.1;Parent=gene-HGK48_RS02855;Dbxref=GenBank:WP_002847988.1;Name=WP_002847988.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085694.1;locus_tag=HGK48_RS02855;product=type Z 30S ribosomal protein S14;protein_id=WP_002847988.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq gene 10881 11363 . - . ID=gene-HGK48_RS02860;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=HGK48_RS02860 NZ_JAATTN010000031.1 Protein Homology CDS 10881 11363 . - 0 ID=cds-WP_168236668.1;Parent=gene-HGK48_RS02860;Dbxref=GenBank:WP_168236668.1;Name=WP_168236668.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013553079.1;locus_tag=HGK48_RS02860;product=50S ribosomal protein L5;protein_id=WP_168236668.1;transl_table=11 NZ_JAATTN010000031.1 RefSeq pseudogene 11364 11459 . + . ID=gene-HGK48_RS02865;Name=rplE;end_range=11459,.;gbkey=Gene;gene=rplE;gene_biotype=pseudogene;locus_tag=HGK48_RS02865;partial=true;pseudo=true;start_range=.,11364 NZ_JAATTN010000031.1 Protein Homology CDS 11364 11459 . + 0 ID=cds-HGK48_RS02865;Parent=gene-HGK48_RS02865;Note=part of 50S and 5S/L5/L18/L25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11459,.;gbkey=CDS;gene=rplE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002345061.1;locus_tag=HGK48_RS02865;partial=true;product=50S ribosomal protein L5;pseudo=true;start_range=.,11364;transl_table=11 ##sequence-region NZ_JAATTN010000320.1 1 1461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000320.1 RefSeq region 1 1461 . + . ID=NZ_JAATTN010000320.1:1..1461;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000320.1 RefSeq gene 3 281 . - . ID=gene-HGK48_RS10000;Name=HGK48_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10000 NZ_JAATTN010000320.1 GeneMarkS-2+ CDS 3 281 . - 0 ID=cds-WP_240944845.1;Parent=gene-HGK48_RS10000;Dbxref=GenBank:WP_240944845.1;Name=WP_240944845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10000;product=hypothetical protein;protein_id=WP_240944845.1;transl_table=11 NZ_JAATTN010000320.1 RefSeq pseudogene 372 1461 . + . ID=gene-HGK48_RS10005;Name=HGK48_RS10005;end_range=1461,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10005;partial=true;pseudo=true NZ_JAATTN010000320.1 GeneMarkS-2+ CDS 372 1461 . + 0 ID=cds-HGK48_RS10005;Parent=gene-HGK48_RS10005;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1461,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10005;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000321.1 1 1512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000321.1 RefSeq region 1 1512 . + . ID=NZ_JAATTN010000321.1:1..1512;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000321.1 RefSeq gene 1 226 . + . ID=gene-HGK48_RS10010;Name=HGK48_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10010;partial=true;start_range=.,1 NZ_JAATTN010000321.1 GeneMarkS-2+ CDS 1 226 . + 1 ID=cds-WP_168236931.1;Parent=gene-HGK48_RS10010;Dbxref=GenBank:WP_168236931.1;Name=WP_168236931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10010;partial=true;product=hypothetical protein;protein_id=WP_168236931.1;start_range=.,1;transl_table=11 NZ_JAATTN010000321.1 RefSeq gene 227 895 . + . ID=gene-HGK48_RS10015;Name=HGK48_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10015 NZ_JAATTN010000321.1 Protein Homology CDS 227 895 . + 0 ID=cds-WP_024305227.1;Parent=gene-HGK48_RS10015;Dbxref=GenBank:WP_024305227.1;Name=WP_024305227.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731975.1;locus_tag=HGK48_RS10015;product=response regulator transcription factor;protein_id=WP_024305227.1;transl_table=11 NZ_JAATTN010000321.1 RefSeq gene 885 1512 . + . ID=gene-HGK48_RS10020;Name=HGK48_RS10020;end_range=1512,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10020;partial=true NZ_JAATTN010000321.1 GeneMarkS-2+ CDS 885 1512 . + 0 ID=cds-WP_168236932.1;Parent=gene-HGK48_RS10020;Dbxref=GenBank:WP_168236932.1;Name=WP_168236932.1;end_range=1512,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10020;partial=true;product=hypothetical protein;protein_id=WP_168236932.1;transl_table=11 ##sequence-region NZ_JAATTN010000322.1 1 1487 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000322.1 RefSeq region 1 1487 . + . ID=NZ_JAATTN010000322.1:1..1487;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000322.1 RefSeq gene 95 1270 . + . ID=gene-HGK48_RS10030;Name=HGK48_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10030 NZ_JAATTN010000322.1 GeneMarkS-2+ CDS 95 1270 . + 0 ID=cds-WP_024305427.1;Parent=gene-HGK48_RS10030;Dbxref=GenBank:WP_024305427.1;Name=WP_024305427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10030;product=hypothetical protein;protein_id=WP_024305427.1;transl_table=11 ##sequence-region NZ_JAATTN010000323.1 1 1482 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000323.1 RefSeq region 1 1482 . + . ID=NZ_JAATTN010000323.1:1..1482;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000323.1 RefSeq gene 202 1482 . + . ID=gene-HGK48_RS10040;Name=HGK48_RS10040;end_range=1482,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10040;partial=true NZ_JAATTN010000323.1 Protein Homology CDS 202 1482 . + 0 ID=cds-WP_168236933.1;Parent=gene-HGK48_RS10040;Dbxref=GenBank:WP_168236933.1;Name=WP_168236933.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;end_range=1482,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849378.1;locus_tag=HGK48_RS10040;partial=true;product=MATE family efflux transporter;protein_id=WP_168236933.1;transl_table=11 ##sequence-region NZ_JAATTN010000324.1 1 1396 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000324.1 RefSeq region 1 1396 . + . ID=NZ_JAATTN010000324.1:1..1396;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000324.1 RefSeq gene 1 1052 . - . ID=gene-HGK48_RS10045;Name=HGK48_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10045;partial=true;start_range=.,1 NZ_JAATTN010000324.1 Protein Homology CDS 1 1052 . - 0 ID=cds-WP_168236934.1;Parent=gene-HGK48_RS10045;Dbxref=GenBank:WP_168236934.1;Name=WP_168236934.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731962.1;locus_tag=HGK48_RS10045;partial=true;product=MFS transporter;protein_id=WP_168236934.1;start_range=.,1;transl_table=11 NZ_JAATTN010000324.1 RefSeq gene 1049 1396 . - . ID=gene-HGK48_RS10050;Name=HGK48_RS10050;end_range=1396,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10050;partial=true NZ_JAATTN010000324.1 Protein Homology CDS 1049 1396 . - 0 ID=cds-WP_168236935.1;Parent=gene-HGK48_RS10050;Dbxref=GenBank:WP_168236935.1;Name=WP_168236935.1;end_range=1396,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016087.6;locus_tag=HGK48_RS10050;partial=true;product=copper resistance protein NlpE N-terminal domain-containing protein;protein_id=WP_168236935.1;transl_table=11 ##sequence-region NZ_JAATTN010000325.1 1 1473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000325.1 RefSeq region 1 1473 . + . ID=NZ_JAATTN010000325.1:1..1473;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000325.1 RefSeq gene 1 199 . - . ID=gene-HGK48_RS10055;Name=HGK48_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10055;partial=true;start_range=.,1 NZ_JAATTN010000325.1 Protein Homology CDS 1 199 . - 0 ID=cds-WP_168236936.1;Parent=gene-HGK48_RS10055;Dbxref=GenBank:WP_168236936.1;Name=WP_168236936.1;Ontology_term=GO:1902600,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732106.1;locus_tag=HGK48_RS10055;partial=true;product=AtpZ/AtpI family protein;protein_id=WP_168236936.1;start_range=.,1;transl_table=11 NZ_JAATTN010000325.1 RefSeq gene 196 1467 . - . ID=gene-HGK48_RS10060;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=HGK48_RS10060 NZ_JAATTN010000325.1 Protein Homology CDS 196 1467 . - 0 ID=cds-WP_002849830.1;Parent=gene-HGK48_RS10060;Dbxref=GenBank:WP_002849830.1;Name=WP_002849830.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849830.1;locus_tag=HGK48_RS10060;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_002849830.1;transl_table=11 ##sequence-region NZ_JAATTN010000326.1 1 1473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000326.1 RefSeq region 1 1473 . + . ID=NZ_JAATTN010000326.1:1..1473;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000326.1 RefSeq pseudogene 1 154 . - . ID=gene-HGK48_RS10065;Name=HGK48_RS10065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10065;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000326.1 Protein Homology CDS 1 154 . - 0 ID=cds-HGK48_RS10065;Parent=gene-HGK48_RS10065;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849397.1;locus_tag=HGK48_RS10065;partial=true;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000326.1 RefSeq gene 260 889 . + . ID=gene-HGK48_RS10070;Name=HGK48_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10070 NZ_JAATTN010000326.1 Protein Homology CDS 260 889 . + 0 ID=cds-WP_002849396.1;Parent=gene-HGK48_RS10070;Dbxref=GenBank:WP_002849396.1;Name=WP_002849396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002947728.1;locus_tag=HGK48_RS10070;product=NlpC/P60 family protein;protein_id=WP_002849396.1;transl_table=11 NZ_JAATTN010000326.1 RefSeq gene 978 1473 . - . ID=gene-HGK48_RS10075;Name=HGK48_RS10075;end_range=1473,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10075;partial=true NZ_JAATTN010000326.1 Protein Homology CDS 978 1473 . - 1 ID=cds-WP_168236937.1;Parent=gene-HGK48_RS10075;Dbxref=GenBank:WP_168236937.1;Name=WP_168236937.1;end_range=1473,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014628.6;locus_tag=HGK48_RS10075;partial=true;product=LutC/YkgG family protein;protein_id=WP_168236937.1;transl_table=11 ##sequence-region NZ_JAATTN010000327.1 1 1453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000327.1 RefSeq region 1 1453 . + . ID=NZ_JAATTN010000327.1:1..1453;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000327.1 RefSeq gene 1 1222 . - . ID=gene-HGK48_RS10080;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=HGK48_RS10080;partial=true;start_range=.,1 NZ_JAATTN010000327.1 Protein Homology CDS 1 1222 . - 0 ID=cds-WP_168236938.1;Parent=gene-HGK48_RS10080;Dbxref=GenBank:WP_168236938.1;Name=WP_168236938.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850018.1;locus_tag=HGK48_RS10080;partial=true;product=phosphoglycerate dehydrogenase;protein_id=WP_168236938.1;start_range=.,1;transl_table=11 NZ_JAATTN010000327.1 RefSeq pseudogene 1226 1453 . - . ID=gene-HGK48_RS10085;Name=HGK48_RS10085;end_range=1453,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10085;partial=true;pseudo=true NZ_JAATTN010000327.1 GeneMarkS-2+ CDS 1226 1453 . - 0 ID=cds-HGK48_RS10085;Parent=gene-HGK48_RS10085;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1453,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10085;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000328.1 1 1446 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000328.1 RefSeq region 1 1446 . + . ID=NZ_JAATTN010000328.1:1..1446;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000328.1 RefSeq gene 103 558 . + . ID=gene-HGK48_RS10090;Name=HGK48_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10090 NZ_JAATTN010000328.1 GeneMarkS-2+ CDS 103 558 . + 0 ID=cds-WP_038452394.1;Parent=gene-HGK48_RS10090;Dbxref=GenBank:WP_038452394.1;Name=WP_038452394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10090;product=hypothetical protein;protein_id=WP_038452394.1;transl_table=11 NZ_JAATTN010000328.1 RefSeq gene 548 1446 . + . ID=gene-HGK48_RS10095;Name=HGK48_RS10095;end_range=1446,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10095;partial=true NZ_JAATTN010000328.1 Protein Homology CDS 548 1446 . + 0 ID=cds-WP_168236939.1;Parent=gene-HGK48_RS10095;Dbxref=GenBank:WP_168236939.1;Name=WP_168236939.1;Ontology_term=GO:0055085,GO:0022857;end_range=1446,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732108.1;locus_tag=HGK48_RS10095;partial=true;product=MFS transporter;protein_id=WP_168236939.1;transl_table=11 ##sequence-region NZ_JAATTN010000329.1 1 1441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000329.1 RefSeq region 1 1441 . + . ID=NZ_JAATTN010000329.1:1..1441;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000329.1 RefSeq pseudogene 1 1408 . - . ID=gene-HGK48_RS10100;Name=HGK48_RS10100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10100;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000329.1 GeneMarkS-2+ CDS 1 1408 . - 0 ID=cds-HGK48_RS10100;Parent=gene-HGK48_RS10100;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10100;partial=true;product=beta strand repeat-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000032.1 1 10954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000032.1 RefSeq region 1 10954 . + . ID=NZ_JAATTN010000032.1:1..10954;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000032.1 RefSeq gene 1 792 . + . ID=gene-HGK48_RS02870;Name=HGK48_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02870;partial=true;start_range=.,1 NZ_JAATTN010000032.1 Protein Homology CDS 1 792 . + 0 ID=cds-WP_168236669.1;Parent=gene-HGK48_RS02870;Dbxref=GenBank:WP_168236669.1;Name=WP_168236669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010403526.1;locus_tag=HGK48_RS02870;partial=true;product=YeeE/YedE thiosulfate transporter family protein;protein_id=WP_168236669.1;start_range=.,1;transl_table=11 NZ_JAATTN010000032.1 RefSeq gene 792 1028 . + . ID=gene-HGK48_RS02875;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=HGK48_RS02875 NZ_JAATTN010000032.1 Protein Homology CDS 792 1028 . + 0 ID=cds-WP_002848999.1;Parent=gene-HGK48_RS02875;Dbxref=GenBank:WP_002848999.1;Name=WP_002848999.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848999.1;locus_tag=HGK48_RS02875;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_002848999.1;transl_table=11 NZ_JAATTN010000032.1 RefSeq gene 1205 1966 . - . ID=gene-HGK48_RS02880;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=HGK48_RS02880 NZ_JAATTN010000032.1 Protein Homology CDS 1205 1966 . - 0 ID=cds-WP_002849001.1;Parent=gene-HGK48_RS02880;Dbxref=GenBank:WP_002849001.1;Name=WP_002849001.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849001.1;locus_tag=HGK48_RS02880;product=glutamate racemase;protein_id=WP_002849001.1;transl_table=11 NZ_JAATTN010000032.1 RefSeq gene 1970 3772 . - . ID=gene-HGK48_RS02885;Name=HGK48_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02885 NZ_JAATTN010000032.1 Protein Homology CDS 1970 3772 . - 0 ID=cds-WP_011731878.1;Parent=gene-HGK48_RS02885;Dbxref=GenBank:WP_011731878.1;Name=WP_011731878.1;Ontology_term=GO:0009234,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018713917.1;locus_tag=HGK48_RS02885;product=menaquinone biosynthesis decarboxylase;protein_id=WP_011731878.1;transl_table=11 NZ_JAATTN010000032.1 RefSeq gene 4455 5969 . + . ID=gene-HGK48_RS02890;Name=HGK48_RS02890;gbkey=Gene;gene_biotype=rRNA;locus_tag=HGK48_RS02890 NZ_JAATTN010000032.1 cmsearch rRNA 4455 5969 . + . ID=rna-HGK48_RS02890;Parent=gene-HGK48_RS02890;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS02890;product=16S ribosomal RNA NZ_JAATTN010000032.1 cmsearch exon 4455 5969 . + . ID=exon-HGK48_RS02890-1;Parent=rna-HGK48_RS02890;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS02890;product=16S ribosomal RNA NZ_JAATTN010000032.1 RefSeq gene 6061 6136 . + . ID=gene-HGK48_RS02895;Name=HGK48_RS02895;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS02895 NZ_JAATTN010000032.1 tRNAscan-SE tRNA 6061 6136 . + . ID=rna-HGK48_RS02895;Parent=gene-HGK48_RS02895;anticodon=(pos:6094..6096);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS02895;product=tRNA-Ala NZ_JAATTN010000032.1 tRNAscan-SE exon 6061 6136 . + . ID=exon-HGK48_RS02895-1;Parent=rna-HGK48_RS02895;anticodon=(pos:6094..6096);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS02895;product=tRNA-Ala NZ_JAATTN010000032.1 RefSeq gene 6725 9755 . + . ID=gene-HGK48_RS02900;Name=HGK48_RS02900;gbkey=Gene;gene_biotype=rRNA;locus_tag=HGK48_RS02900 NZ_JAATTN010000032.1 cmsearch rRNA 6725 9755 . + . ID=rna-HGK48_RS02900;Parent=gene-HGK48_RS02900;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS02900;product=23S ribosomal RNA NZ_JAATTN010000032.1 cmsearch exon 6725 9755 . + . ID=exon-HGK48_RS02900-1;Parent=rna-HGK48_RS02900;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS02900;product=23S ribosomal RNA NZ_JAATTN010000032.1 RefSeq gene 10059 10177 . + . ID=gene-HGK48_RS02905;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=HGK48_RS02905 NZ_JAATTN010000032.1 cmsearch rRNA 10059 10177 . + . ID=rna-HGK48_RS02905;Parent=gene-HGK48_RS02905;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS02905;product=5S ribosomal RNA NZ_JAATTN010000032.1 cmsearch exon 10059 10177 . + . ID=exon-HGK48_RS02905-1;Parent=rna-HGK48_RS02905;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS02905;product=5S ribosomal RNA NZ_JAATTN010000032.1 RefSeq gene 10482 10919 . + . ID=gene-HGK48_RS02910;Name=HGK48_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02910 NZ_JAATTN010000032.1 Protein Homology CDS 10482 10919 . + 0 ID=cds-WP_002848150.1;Parent=gene-HGK48_RS02910;Dbxref=GenBank:WP_002848150.1;Name=WP_002848150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848150.1;locus_tag=HGK48_RS02910;product=DsrE family protein;protein_id=WP_002848150.1;transl_table=11 ##sequence-region NZ_JAATTN010000330.1 1 1353 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000330.1 RefSeq region 1 1353 . + . ID=NZ_JAATTN010000330.1:1..1353;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000330.1 RefSeq gene 104 694 . + . ID=gene-HGK48_RS10105;Name=HGK48_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10105 NZ_JAATTN010000330.1 Protein Homology CDS 104 694 . + 0 ID=cds-WP_002849661.1;Parent=gene-HGK48_RS10105;Dbxref=GenBank:WP_002849661.1;Name=WP_002849661.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849661.1;locus_tag=HGK48_RS10105;product=MBL fold metallo-hydrolase;protein_id=WP_002849661.1;transl_table=11 NZ_JAATTN010000330.1 RefSeq gene 687 1196 . - . ID=gene-HGK48_RS10110;Name=HGK48_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10110 NZ_JAATTN010000330.1 Protein Homology CDS 687 1196 . - 0 ID=cds-WP_002849653.1;Parent=gene-HGK48_RS10110;Dbxref=GenBank:WP_002849653.1;Name=WP_002849653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009495936.1;locus_tag=HGK48_RS10110;product=hotdog family protein;protein_id=WP_002849653.1;transl_table=11 NZ_JAATTN010000330.1 RefSeq gene 1208 1353 . - . ID=gene-HGK48_RS10115;Name=HGK48_RS10115;end_range=1353,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10115;partial=true NZ_JAATTN010000330.1 Protein Homology CDS 1208 1353 . - 2 ID=cds-WP_168236940.1;Parent=gene-HGK48_RS10115;Dbxref=GenBank:WP_168236940.1;Name=WP_168236940.1;end_range=1353,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732070.1;locus_tag=HGK48_RS10115;partial=true;product=DUF1698 domain-containing protein;protein_id=WP_168236940.1;transl_table=11 ##sequence-region NZ_JAATTN010000331.1 1 1348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000331.1 RefSeq region 1 1348 . + . ID=NZ_JAATTN010000331.1:1..1348;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000331.1 RefSeq gene 202 1348 . + . ID=gene-HGK48_RS10120;Name=HGK48_RS10120;end_range=1348,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10120;partial=true NZ_JAATTN010000331.1 Protein Homology CDS 202 1348 . + 0 ID=cds-WP_168236941.1;Parent=gene-HGK48_RS10120;Dbxref=GenBank:WP_168236941.1;Name=WP_168236941.1;end_range=1348,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019335.6;locus_tag=HGK48_RS10120;partial=true;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_168236941.1;transl_table=11 ##sequence-region NZ_JAATTN010000332.1 1 1394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000332.1 RefSeq region 1 1394 . + . ID=NZ_JAATTN010000332.1:1..1394;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000332.1 RefSeq gene 72 305 . + . ID=gene-HGK48_RS10125;Name=HGK48_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10125 NZ_JAATTN010000332.1 Protein Homology CDS 72 305 . + 0 ID=cds-WP_046037407.1;Parent=gene-HGK48_RS10125;Dbxref=GenBank:WP_046037407.1;Name=WP_046037407.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018755.6;locus_tag=HGK48_RS10125;product=DUF1353 domain-containing protein;protein_id=WP_046037407.1;transl_table=11 NZ_JAATTN010000332.1 RefSeq gene 522 656 . - . ID=gene-HGK48_RS11415;Name=HGK48_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11415 NZ_JAATTN010000332.1 GeneMarkS-2+ CDS 522 656 . - 0 ID=cds-WP_259459121.1;Parent=gene-HGK48_RS11415;Dbxref=GenBank:WP_259459121.1;Name=WP_259459121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11415;product=hypothetical protein;protein_id=WP_259459121.1;transl_table=11 ##sequence-region NZ_JAATTN010000333.1 1 1342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000333.1 RefSeq region 1 1342 . + . ID=NZ_JAATTN010000333.1:1..1342;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000333.1 RefSeq gene 17 223 . + . ID=gene-HGK48_RS10130;Name=HGK48_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10130 NZ_JAATTN010000333.1 Protein Homology CDS 17 223 . + 0 ID=cds-WP_002850481.1;Parent=gene-HGK48_RS10130;Dbxref=GenBank:WP_002850481.1;Name=WP_002850481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850481.1;locus_tag=HGK48_RS10130;product=hypothetical protein;protein_id=WP_002850481.1;transl_table=11 NZ_JAATTN010000333.1 RefSeq gene 280 1284 . + . ID=gene-HGK48_RS10135;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=HGK48_RS10135 NZ_JAATTN010000333.1 Protein Homology CDS 280 1284 . + 0 ID=cds-WP_168236942.1;Parent=gene-HGK48_RS10135;Dbxref=GenBank:WP_168236942.1;Name=WP_168236942.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016646049.1;locus_tag=HGK48_RS10135;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_168236942.1;transl_table=11 ##sequence-region NZ_JAATTN010000334.1 1 1339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000334.1 RefSeq region 1 1339 . + . ID=NZ_JAATTN010000334.1:1..1339;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000334.1 RefSeq gene 1 1315 . - . ID=gene-HGK48_RS10140;Name=HGK48_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10140;partial=true;start_range=.,1 NZ_JAATTN010000334.1 Protein Homology CDS 1 1315 . - 0 ID=cds-WP_240944846.1;Parent=gene-HGK48_RS10140;Dbxref=GenBank:WP_240944846.1;Name=WP_240944846.1;Ontology_term=GO:0050136;gbkey=CDS;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: protein motif:HMM:TIGR01974.1;locus_tag=HGK48_RS10140;partial=true;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_240944846.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000335.1 1 1332 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000335.1 RefSeq region 1 1332 . + . ID=NZ_JAATTN010000335.1:1..1332;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000335.1 RefSeq gene 1 478 . + . ID=gene-HGK48_RS10145;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=HGK48_RS10145;partial=true;start_range=.,1 NZ_JAATTN010000335.1 Protein Homology CDS 1 478 . + 1 ID=cds-WP_168236944.1;Parent=gene-HGK48_RS10145;Dbxref=GenBank:WP_168236944.1;Name=WP_168236944.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731940.1;locus_tag=HGK48_RS10145;partial=true;product=flagellar type III secretion system pore protein FliP;protein_id=WP_168236944.1;start_range=.,1;transl_table=11 NZ_JAATTN010000335.1 RefSeq gene 471 1332 . - . ID=gene-HGK48_RS10150;Name=HGK48_RS10150;end_range=1332,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10150;partial=true NZ_JAATTN010000335.1 GeneMarkS-2+ CDS 471 1332 . - 1 ID=cds-WP_168236945.1;Parent=gene-HGK48_RS10150;Dbxref=GenBank:WP_168236945.1;Name=WP_168236945.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=1332,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10150;partial=true;product=DMT family transporter;protein_id=WP_168236945.1;transl_table=11 ##sequence-region NZ_JAATTN010000336.1 1 1316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000336.1 RefSeq region 1 1316 . + . ID=NZ_JAATTN010000336.1:1..1316;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000336.1 RefSeq gene 1 1316 . + . ID=gene-HGK48_RS10155;Name=HGK48_RS10155;end_range=1316,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10155;partial=true;start_range=.,1 NZ_JAATTN010000336.1 GeneMarkS-2+ CDS 1 1316 . + 2 ID=cds-WP_168236946.1;Parent=gene-HGK48_RS10155;Dbxref=GenBank:WP_168236946.1;Name=WP_168236946.1;end_range=1316,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10155;partial=true;product=hypothetical protein;protein_id=WP_168236946.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000337.1 1 1305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000337.1 RefSeq region 1 1305 . + . ID=NZ_JAATTN010000337.1:1..1305;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000337.1 RefSeq gene 146 313 . + . ID=gene-HGK48_RS10160;Name=HGK48_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10160 NZ_JAATTN010000337.1 Protein Homology CDS 146 313 . + 0 ID=cds-WP_164468585.1;Parent=gene-HGK48_RS10160;Dbxref=GenBank:WP_164468585.1;Name=WP_164468585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018713715.1;locus_tag=HGK48_RS10160;product=hypothetical protein;protein_id=WP_164468585.1;transl_table=11 NZ_JAATTN010000337.1 RefSeq pseudogene 313 1305 . + . ID=gene-HGK48_RS10165;Name=HGK48_RS10165;end_range=1305,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10165;partial=true;pseudo=true NZ_JAATTN010000337.1 GeneMarkS-2+ CDS 313 1305 . + 0 ID=cds-HGK48_RS10165;Parent=gene-HGK48_RS10165;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1305,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10165;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000338.1 1 1221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000338.1 RefSeq region 1 1221 . + . ID=NZ_JAATTN010000338.1:1..1221;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000338.1 RefSeq pseudogene 58 1221 . + . ID=gene-HGK48_RS10170;Name=HGK48_RS10170;end_range=1221,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10170;partial=true;pseudo=true;start_range=.,58 NZ_JAATTN010000338.1 Protein Homology CDS 58 1221 . + 0 ID=cds-HGK48_RS10170;Parent=gene-HGK48_RS10170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0009306,GO:0016020;end_range=1221,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849696.1;locus_tag=HGK48_RS10170;partial=true;product=FHIPEP family type III secretion protein;pseudo=true;start_range=.,58;transl_table=11 ##sequence-region NZ_JAATTN010000339.1 1 1292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000339.1 RefSeq region 1 1292 . + . ID=NZ_JAATTN010000339.1:1..1292;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000339.1 RefSeq gene 1 445 . + . ID=gene-HGK48_RS10175;Name=HGK48_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10175;partial=true;start_range=.,1 NZ_JAATTN010000339.1 Protein Homology CDS 1 445 . + 1 ID=cds-WP_168236947.1;Parent=gene-HGK48_RS10175;Dbxref=GenBank:WP_168236947.1;Name=WP_168236947.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849816.1;locus_tag=HGK48_RS10175;partial=true;product=amino acid ABC transporter permease;protein_id=WP_168236947.1;start_range=.,1;transl_table=11 NZ_JAATTN010000339.1 RefSeq gene 448 1110 . + . ID=gene-HGK48_RS10180;Name=HGK48_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10180 NZ_JAATTN010000339.1 Protein Homology CDS 448 1110 . + 0 ID=cds-WP_002849815.1;Parent=gene-HGK48_RS10180;Dbxref=GenBank:WP_002849815.1;Name=WP_002849815.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849815.1;locus_tag=HGK48_RS10180;product=amino acid ABC transporter permease;protein_id=WP_002849815.1;transl_table=11 ##sequence-region NZ_JAATTN010000033.1 1 10791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000033.1 RefSeq region 1 10791 . + . ID=NZ_JAATTN010000033.1:1..10791;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000033.1 RefSeq gene 1 417 . - . ID=gene-HGK48_RS02915;Name=HGK48_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02915;partial=true;start_range=.,1 NZ_JAATTN010000033.1 Protein Homology CDS 1 417 . - 0 ID=cds-WP_168236670.1;Parent=gene-HGK48_RS02915;Dbxref=GenBank:WP_168236670.1;Name=WP_168236670.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848129.1;locus_tag=HGK48_RS02915;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_168236670.1;start_range=.,1;transl_table=11 NZ_JAATTN010000033.1 RefSeq gene 427 1593 . - . ID=gene-HGK48_RS02920;Name=HGK48_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02920 NZ_JAATTN010000033.1 Protein Homology CDS 427 1593 . - 0 ID=cds-WP_002848128.1;Parent=gene-HGK48_RS02920;Dbxref=GenBank:WP_002848128.1;Name=WP_002848128.1;Ontology_term=GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848128.1;locus_tag=HGK48_RS02920;product=Opr family porin;protein_id=WP_002848128.1;transl_table=11 NZ_JAATTN010000033.1 RefSeq gene 1606 3228 . - . ID=gene-HGK48_RS02925;Name=HGK48_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02925 NZ_JAATTN010000033.1 Protein Homology CDS 1606 3228 . - 0 ID=cds-WP_024305275.1;Parent=gene-HGK48_RS02925;Dbxref=GenBank:WP_024305275.1;Name=WP_024305275.1;Ontology_term=GO:0170035,GO:0016841;gbkey=CDS;go_function=ammonia-lyase activity|0016841||IEA;go_process=L-amino acid catabolic process|0170035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848127.1;locus_tag=HGK48_RS02925;product=HAL/PAL/TAL family ammonia-lyase;protein_id=WP_024305275.1;transl_table=11 NZ_JAATTN010000033.1 RefSeq gene 3756 4391 . + . ID=gene-HGK48_RS02930;Name=HGK48_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02930 NZ_JAATTN010000033.1 Protein Homology CDS 3756 4391 . + 0 ID=cds-WP_002848126.1;Parent=gene-HGK48_RS02930;Dbxref=GenBank:WP_002848126.1;Name=WP_002848126.1;Ontology_term=GO:0009061,GO:0019645,GO:0046872,GO:0051539;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848126.1;locus_tag=HGK48_RS02930;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_002848126.1;transl_table=11 NZ_JAATTN010000033.1 RefSeq gene 4384 6336 . + . ID=gene-HGK48_RS02935;Name=HGK48_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02935 NZ_JAATTN010000033.1 Protein Homology CDS 4384 6336 . + 0 ID=cds-WP_002848125.1;Parent=gene-HGK48_RS02935;Dbxref=GenBank:WP_002848125.1;Name=WP_002848125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012581.7;locus_tag=HGK48_RS02935;product=proton-conducting transporter transmembrane domain-containing protein;protein_id=WP_002848125.1;transl_table=11 NZ_JAATTN010000033.1 RefSeq gene 6337 7257 . + . ID=gene-HGK48_RS02940;Name=HGK48_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02940 NZ_JAATTN010000033.1 Protein Homology CDS 6337 7257 . + 0 ID=cds-WP_002848124.1;Parent=gene-HGK48_RS02940;Dbxref=GenBank:WP_002848124.1;Name=WP_002848124.1;Ontology_term=GO:0022900,GO:0016491,GO:0005886,GO:0016020,GO:1990204;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731708.1;locus_tag=HGK48_RS02940;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_002848124.1;transl_table=11 NZ_JAATTN010000033.1 RefSeq gene 7259 7894 . + . ID=gene-HGK48_RS02945;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=HGK48_RS02945 NZ_JAATTN010000033.1 Protein Homology CDS 7259 7894 . + 0 ID=cds-WP_011731707.1;Parent=gene-HGK48_RS02945;Dbxref=GenBank:WP_011731707.1;Name=WP_011731707.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731707.1;locus_tag=HGK48_RS02945;product=hydrogenase 4 membrane subunit;protein_id=WP_011731707.1;transl_table=11 NZ_JAATTN010000033.1 RefSeq gene 7898 9373 . + . ID=gene-HGK48_RS02950;Name=HGK48_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02950 NZ_JAATTN010000033.1 Protein Homology CDS 7898 9373 . + 0 ID=cds-WP_002848122.1;Parent=gene-HGK48_RS02950;Dbxref=GenBank:WP_002848122.1;Name=WP_002848122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848122.1;locus_tag=HGK48_RS02950;product=proton-conducting transporter transmembrane domain-containing protein;protein_id=WP_002848122.1;transl_table=11 NZ_JAATTN010000033.1 RefSeq gene 9373 10791 . + . ID=gene-HGK48_RS02955;Name=HGK48_RS02955;end_range=10791,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02955;partial=true NZ_JAATTN010000033.1 Protein Homology CDS 9373 10791 . + 0 ID=cds-WP_168236671.1;Parent=gene-HGK48_RS02955;Dbxref=GenBank:WP_168236671.1;Name=WP_168236671.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;end_range=10791,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848121.1;locus_tag=HGK48_RS02955;partial=true;product=NADH-quinone oxidoreductase subunit D-related protein;protein_id=WP_168236671.1;transl_table=11 ##sequence-region NZ_JAATTN010000340.1 1 1291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000340.1 RefSeq region 1 1291 . + . ID=NZ_JAATTN010000340.1:1..1291;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000340.1 RefSeq gene 1 332 . + . ID=gene-HGK48_RS10185;Name=HGK48_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10185;partial=true;start_range=.,1 NZ_JAATTN010000340.1 Protein Homology CDS 1 332 . + 2 ID=cds-WP_168236948.1;Parent=gene-HGK48_RS10185;Dbxref=GenBank:WP_168236948.1;Name=WP_168236948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849391.1;locus_tag=HGK48_RS10185;partial=true;product=DUF455 family protein;protein_id=WP_168236948.1;start_range=.,1;transl_table=11 NZ_JAATTN010000340.1 RefSeq gene 329 808 . + . ID=gene-HGK48_RS10190;Name=HGK48_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10190 NZ_JAATTN010000340.1 Protein Homology CDS 329 808 . + 0 ID=cds-WP_002849389.1;Parent=gene-HGK48_RS10190;Dbxref=GenBank:WP_002849389.1;Name=WP_002849389.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849389.1;locus_tag=HGK48_RS10190;product=SixA phosphatase family protein;protein_id=WP_002849389.1;transl_table=11 NZ_JAATTN010000340.1 RefSeq gene 828 1291 . - . ID=gene-HGK48_RS10195;Name=HGK48_RS10195;end_range=1291,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10195;partial=true NZ_JAATTN010000340.1 GeneMarkS-2+ CDS 828 1291 . - 2 ID=cds-WP_394352692.1;Parent=gene-HGK48_RS10195;Dbxref=GenBank:WP_394352692.1;Name=WP_394352692.1;end_range=1291,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10195;partial=true;product=hypothetical protein;protein_id=WP_394352692.1;transl_table=11 ##sequence-region NZ_JAATTN010000341.1 1 1274 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000341.1 RefSeq region 1 1274 . + . ID=NZ_JAATTN010000341.1:1..1274;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000341.1 RefSeq gene 1 940 . - . ID=gene-HGK48_RS10200;Name=HGK48_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10200;partial=true;start_range=.,1 NZ_JAATTN010000341.1 Protein Homology CDS 1 940 . - 0 ID=cds-WP_168236949.1;Parent=gene-HGK48_RS10200;Dbxref=GenBank:WP_168236949.1;Name=WP_168236949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010404288.1;locus_tag=HGK48_RS10200;partial=true;product=terminase large subunit domain-containing protein;protein_id=WP_168236949.1;start_range=.,1;transl_table=11 NZ_JAATTN010000341.1 RefSeq pseudogene 1042 1274 . - . ID=gene-HGK48_RS10205;Name=HGK48_RS10205;end_range=1274,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10205;partial=true;pseudo=true NZ_JAATTN010000341.1 Protein Homology CDS 1042 1274 . - 2 ID=cds-HGK48_RS10205;Parent=gene-HGK48_RS10205;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1274,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849061.1;locus_tag=HGK48_RS10205;partial=true;product=phage portal protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000342.1 1 1267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000342.1 RefSeq region 1 1267 . + . ID=NZ_JAATTN010000342.1:1..1267;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000342.1 RefSeq gene 1 1267 . + . ID=gene-HGK48_RS10210;Name=HGK48_RS10210;end_range=1267,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10210;partial=true;start_range=.,1 NZ_JAATTN010000342.1 Protein Homology CDS 1 1267 . + 0 ID=cds-WP_168236951.1;Parent=gene-HGK48_RS10210;Dbxref=GenBank:WP_168236951.1;Name=WP_168236951.1;Ontology_term=GO:0006812,GO:0042625,GO:0016020;end_range=1267,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848625.1;locus_tag=HGK48_RS10210;partial=true;product=heavy metal translocating P-type ATPase;protein_id=WP_168236951.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000343.1 1 1264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000343.1 RefSeq region 1 1264 . + . ID=NZ_JAATTN010000343.1:1..1264;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000343.1 RefSeq gene 1 585 . - . ID=gene-HGK48_RS10215;Name=dsbI;gbkey=Gene;gene=dsbI;gene_biotype=protein_coding;locus_tag=HGK48_RS10215;partial=true;start_range=.,1 NZ_JAATTN010000343.1 Protein Homology CDS 1 585 . - 0 ID=cds-WP_168236952.1;Parent=gene-HGK48_RS10215;Dbxref=GenBank:WP_168236952.1;Name=WP_168236952.1;gbkey=CDS;gene=dsbI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848655.1;locus_tag=HGK48_RS10215;partial=true;product=protein-disulfide oxidoreductase DsbI;protein_id=WP_168236952.1;start_range=.,1;transl_table=11 NZ_JAATTN010000343.1 RefSeq gene 596 1264 . - . ID=gene-HGK48_RS10220;Name=HGK48_RS10220;end_range=1264,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10220;partial=true NZ_JAATTN010000343.1 Protein Homology CDS 596 1264 . - 0 ID=cds-WP_168236953.1;Parent=gene-HGK48_RS10220;Dbxref=GenBank:WP_168236953.1;Name=WP_168236953.1;Ontology_term=GO:0015035;end_range=1264,.;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848653.1;locus_tag=HGK48_RS10220;partial=true;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_168236953.1;transl_table=11 ##sequence-region NZ_JAATTN010000344.1 1 1161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000344.1 RefSeq region 1 1161 . + . ID=NZ_JAATTN010000344.1:1..1161;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000344.1 RefSeq gene 1 1161 . + . ID=gene-HGK48_RS10225;Name=HGK48_RS10225;end_range=1161,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10225;partial=true;start_range=.,1 NZ_JAATTN010000344.1 Protein Homology CDS 1 1161 . + 2 ID=cds-WP_168236954.1;Parent=gene-HGK48_RS10225;Dbxref=GenBank:WP_168236954.1;Name=WP_168236954.1;end_range=1161,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015397.6;locus_tag=HGK48_RS10225;partial=true;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_168236954.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000345.1 1 1238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000345.1 RefSeq region 1 1238 . + . ID=NZ_JAATTN010000345.1:1..1238;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000345.1 RefSeq gene 1 442 . - . ID=gene-HGK48_RS10230;Name=HGK48_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10230;partial=true;start_range=.,1 NZ_JAATTN010000345.1 Protein Homology CDS 1 442 . - 0 ID=cds-WP_168236955.1;Parent=gene-HGK48_RS10230;Dbxref=GenBank:WP_168236955.1;Name=WP_168236955.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849220.1;locus_tag=HGK48_RS10230;partial=true;product=EamA family transporter;protein_id=WP_168236955.1;start_range=.,1;transl_table=11 NZ_JAATTN010000345.1 RefSeq gene 454 1200 . - . ID=gene-HGK48_RS10235;Name=HGK48_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10235 NZ_JAATTN010000345.1 Protein Homology CDS 454 1200 . - 0 ID=cds-WP_011731951.1;Parent=gene-HGK48_RS10235;Dbxref=GenBank:WP_011731951.1;Name=WP_011731951.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013135222.1;locus_tag=HGK48_RS10235;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_011731951.1;transl_table=11 ##sequence-region NZ_JAATTN010000346.1 1 1230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000346.1 RefSeq region 1 1230 . + . ID=NZ_JAATTN010000346.1:1..1230;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000346.1 RefSeq gene 1 1097 . + . ID=gene-HGK48_RS10240;Name=HGK48_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10240;partial=true;start_range=.,1 NZ_JAATTN010000346.1 Protein Homology CDS 1 1097 . + 2 ID=cds-WP_206120335.1;Parent=gene-HGK48_RS10240;Dbxref=GenBank:WP_206120335.1;Name=WP_206120335.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017870.6;locus_tag=HGK48_RS10240;partial=true;product=DUF945 family protein;protein_id=WP_206120335.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000347.1 1 1220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000347.1 RefSeq region 1 1220 . + . ID=NZ_JAATTN010000347.1:1..1220;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000347.1 RefSeq gene 42 479 . + . ID=gene-HGK48_RS10245;Name=HGK48_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10245 NZ_JAATTN010000347.1 Protein Homology CDS 42 479 . + 0 ID=cds-WP_002850356.1;Parent=gene-HGK48_RS10245;Dbxref=GenBank:WP_002850356.1;Name=WP_002850356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850356.1;locus_tag=HGK48_RS10245;product=hypothetical protein;protein_id=WP_002850356.1;transl_table=11 NZ_JAATTN010000347.1 RefSeq gene 476 661 . + . ID=gene-HGK48_RS10250;Name=HGK48_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10250 NZ_JAATTN010000347.1 Protein Homology CDS 476 661 . + 0 ID=cds-WP_002850358.1;Parent=gene-HGK48_RS10250;Dbxref=GenBank:WP_002850358.1;Name=WP_002850358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850358.1;locus_tag=HGK48_RS10250;product=NrdR family transcriptional regulator;protein_id=WP_002850358.1;transl_table=11 NZ_JAATTN010000347.1 RefSeq pseudogene 654 1220 . + . ID=gene-HGK48_RS10255;Name=HGK48_RS10255;end_range=1220,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10255;partial=true;pseudo=true NZ_JAATTN010000347.1 GeneMarkS-2+ CDS 654 1220 . + 0 ID=cds-HGK48_RS10255;Parent=gene-HGK48_RS10255;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1220,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10255;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000348.1 1 1182 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000348.1 RefSeq region 1 1182 . + . ID=NZ_JAATTN010000348.1:1..1182;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000348.1 RefSeq gene 63 1182 . + . ID=gene-HGK48_RS10260;Name=HGK48_RS10260;end_range=1182,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10260;partial=true NZ_JAATTN010000348.1 Protein Homology CDS 63 1182 . + 0 ID=cds-WP_168236957.1;Parent=gene-HGK48_RS10260;Dbxref=GenBank:WP_168236957.1;Name=WP_168236957.1;end_range=1182,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=HGK48_RS10260;partial=true;product=class I SAM-dependent methyltransferase;protein_id=WP_168236957.1;transl_table=11 ##sequence-region NZ_JAATTN010000349.1 1 1169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000349.1 RefSeq region 1 1169 . + . ID=NZ_JAATTN010000349.1:1..1169;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000349.1 RefSeq pseudogene 1 771 . + . ID=gene-HGK48_RS10265;Name=HGK48_RS10265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10265;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000349.1 GeneMarkS-2+ CDS 1 771 . + 0 ID=cds-HGK48_RS10265;Parent=gene-HGK48_RS10265;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10265;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000349.1 RefSeq gene 768 1169 . + . ID=gene-HGK48_RS10270;Name=HGK48_RS10270;end_range=1169,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10270;partial=true NZ_JAATTN010000349.1 GeneMarkS-2+ CDS 768 1169 . + 0 ID=cds-WP_168236958.1;Parent=gene-HGK48_RS10270;Dbxref=GenBank:WP_168236958.1;Name=WP_168236958.1;end_range=1169,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10270;partial=true;product=hypothetical protein;protein_id=WP_168236958.1;transl_table=11 ##sequence-region NZ_JAATTN010000034.1 1 10704 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000034.1 RefSeq region 1 10704 . + . ID=NZ_JAATTN010000034.1:1..10704;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000034.1 RefSeq pseudogene 1 367 . + . ID=gene-HGK48_RS02960;Name=HGK48_RS02960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS02960;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000034.1 Protein Homology CDS 1 367 . + 1 ID=cds-HGK48_RS02960;Parent=gene-HGK48_RS02960;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848076.1;locus_tag=HGK48_RS02960;partial=true;product=thiamine-phosphate kinase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 345 1478 . + . ID=gene-HGK48_RS02965;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=HGK48_RS02965 NZ_JAATTN010000034.1 Protein Homology CDS 345 1478 . + 0 ID=cds-WP_010403376.1;Parent=gene-HGK48_RS02965;Dbxref=GenBank:WP_010403376.1;Name=WP_010403376.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;gene=truD;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010403376.1;locus_tag=HGK48_RS02965;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_010403376.1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 1612 1940 . + . ID=gene-HGK48_RS02970;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=HGK48_RS02970 NZ_JAATTN010000034.1 cmsearch RNase_P_RNA 1612 1940 . + . ID=rna-HGK48_RS02970;Parent=gene-HGK48_RS02970;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS02970;product=RNase P RNA component class A NZ_JAATTN010000034.1 cmsearch exon 1612 1940 . + . ID=exon-HGK48_RS02970-1;Parent=rna-HGK48_RS02970;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS02970;product=RNase P RNA component class A NZ_JAATTN010000034.1 RefSeq gene 1953 2168 . - . ID=gene-HGK48_RS02975;Name=HGK48_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02975 NZ_JAATTN010000034.1 GeneMarkS-2+ CDS 1953 2168 . - 0 ID=cds-WP_010403374.1;Parent=gene-HGK48_RS02975;Dbxref=GenBank:WP_010403374.1;Name=WP_010403374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS02975;product=hypothetical protein;protein_id=WP_010403374.1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 2152 2541 . - . ID=gene-HGK48_RS02980;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=HGK48_RS02980 NZ_JAATTN010000034.1 Protein Homology CDS 2152 2541 . - 0 ID=cds-WP_002848078.1;Parent=gene-HGK48_RS02980;Dbxref=GenBank:WP_002848078.1;Name=WP_002848078.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848078.1;locus_tag=HGK48_RS02980;product=flagellar export chaperone FliS;protein_id=WP_002848078.1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 2552 4375 . - . ID=gene-HGK48_RS02985;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=HGK48_RS02985 NZ_JAATTN010000034.1 Protein Homology CDS 2552 4375 . - 0 ID=cds-WP_011731693.1;Parent=gene-HGK48_RS02985;Dbxref=GenBank:WP_011731693.1;Name=WP_011731693.1;Ontology_term=GO:0007155,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF009400.1;locus_tag=HGK48_RS02985;product=flagellar filament capping protein FliD;protein_id=WP_011731693.1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 4379 4759 . - . ID=gene-HGK48_RS02990;Name=HGK48_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02990 NZ_JAATTN010000034.1 Protein Homology CDS 4379 4759 . - 0 ID=cds-WP_002848079.1;Parent=gene-HGK48_RS02990;Dbxref=GenBank:WP_002848079.1;Name=WP_002848079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004276925.1;locus_tag=HGK48_RS02990;product=FlaG family protein;protein_id=WP_002848079.1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 4880 5227 . + . ID=gene-HGK48_RS02995;Name=HGK48_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS02995 NZ_JAATTN010000034.1 Protein Homology CDS 4880 5227 . + 0 ID=cds-WP_002848081.1;Parent=gene-HGK48_RS02995;Dbxref=GenBank:WP_002848081.1;Name=WP_002848081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848081.1;locus_tag=HGK48_RS02995;product=hypothetical protein;protein_id=WP_002848081.1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 5217 5792 . + . ID=gene-HGK48_RS03000;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=HGK48_RS03000 NZ_JAATTN010000034.1 Protein Homology CDS 5217 5792 . + 0 ID=cds-WP_223261882.1;Parent=gene-HGK48_RS03000;Dbxref=GenBank:WP_223261882.1;Name=WP_223261882.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848082.1;locus_tag=HGK48_RS03000;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_223261882.1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 5866 6903 . + . ID=gene-HGK48_RS03005;Name=HGK48_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03005 NZ_JAATTN010000034.1 Protein Homology CDS 5866 6903 . + 0 ID=cds-WP_024305270.1;Parent=gene-HGK48_RS03005;Dbxref=GenBank:WP_024305270.1;Name=WP_024305270.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002858049.1;locus_tag=HGK48_RS03005;product=flagellar basal body P-ring protein FlgI;protein_id=WP_024305270.1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 6904 7203 . + . ID=gene-HGK48_RS03010;Name=HGK48_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03010 NZ_JAATTN010000034.1 Protein Homology CDS 6904 7203 . + 0 ID=cds-WP_002848085.1;Parent=gene-HGK48_RS03010;Dbxref=GenBank:WP_002848085.1;Name=WP_002848085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848085.1;locus_tag=HGK48_RS03010;product=rod-binding protein;protein_id=WP_002848085.1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 7260 7463 . + . ID=gene-HGK48_RS03015;Name=HGK48_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03015 NZ_JAATTN010000034.1 Protein Homology CDS 7260 7463 . + 0 ID=cds-WP_002848086.1;Parent=gene-HGK48_RS03015;Dbxref=GenBank:WP_002848086.1;Name=WP_002848086.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016223.6;locus_tag=HGK48_RS03015;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_002848086.1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 7502 7936 . + . ID=gene-HGK48_RS03020;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=HGK48_RS03020 NZ_JAATTN010000034.1 Protein Homology CDS 7502 7936 . + 0 ID=cds-WP_002848087.1;Parent=gene-HGK48_RS03020;Dbxref=GenBank:WP_002848087.1;Name=WP_002848087.1;Ontology_term=GO:0044780,GO:0005515;gbkey=CDS;gene=flgN;go_function=protein binding|0005515||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848087.1;locus_tag=HGK48_RS03020;product=flagellar export chaperone FlgN;protein_id=WP_002848087.1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 7938 9791 . + . ID=gene-HGK48_RS03025;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=HGK48_RS03025 NZ_JAATTN010000034.1 Protein Homology CDS 7938 9791 . + 0 ID=cds-WP_002848088.1;Parent=gene-HGK48_RS03025;Dbxref=GenBank:WP_002848088.1;Name=WP_002848088.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848088.1;locus_tag=HGK48_RS03025;product=flagellar hook-associated protein FlgK;protein_id=WP_002848088.1;transl_table=11 NZ_JAATTN010000034.1 RefSeq gene 9794 10570 . + . ID=gene-HGK48_RS03030;Name=HGK48_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03030 NZ_JAATTN010000034.1 Protein Homology CDS 9794 10570 . + 0 ID=cds-WP_002848089.1;Parent=gene-HGK48_RS03030;Dbxref=GenBank:WP_002848089.1;Name=WP_002848089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848089.1;locus_tag=HGK48_RS03030;product=TIGR02757 family protein;protein_id=WP_002848089.1;transl_table=11 ##sequence-region NZ_JAATTN010000350.1 1 1163 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000350.1 RefSeq region 1 1163 . + . ID=NZ_JAATTN010000350.1:1..1163;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000350.1 RefSeq pseudogene 1 487 . + . ID=gene-HGK48_RS10275;Name=HGK48_RS10275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10275;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000350.1 Protein Homology CDS 1 487 . + 1 ID=cds-HGK48_RS10275;Parent=gene-HGK48_RS10275;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732211.1;locus_tag=HGK48_RS10275;partial=true;product=radical SAM protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000350.1 RefSeq gene 688 762 . + . ID=gene-HGK48_RS10280;Name=HGK48_RS10280;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS10280 NZ_JAATTN010000350.1 tRNAscan-SE tRNA 688 762 . + . ID=rna-HGK48_RS10280;Parent=gene-HGK48_RS10280;anticodon=(pos:720..722);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS10280;product=tRNA-Asn NZ_JAATTN010000350.1 tRNAscan-SE exon 688 762 . + . ID=exon-HGK48_RS10280-1;Parent=rna-HGK48_RS10280;anticodon=(pos:720..722);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS10280;product=tRNA-Asn NZ_JAATTN010000350.1 RefSeq gene 923 997 . - . ID=gene-HGK48_RS10285;Name=HGK48_RS10285;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS10285 NZ_JAATTN010000350.1 tRNAscan-SE tRNA 923 997 . - . ID=rna-HGK48_RS10285;Parent=gene-HGK48_RS10285;anticodon=(pos:complement(963..965));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS10285;product=tRNA-Met NZ_JAATTN010000350.1 tRNAscan-SE exon 923 997 . - . ID=exon-HGK48_RS10285-1;Parent=rna-HGK48_RS10285;anticodon=(pos:complement(963..965));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS10285;product=tRNA-Met NZ_JAATTN010000350.1 RefSeq gene 1010 1084 . - . ID=gene-HGK48_RS10290;Name=HGK48_RS10290;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS10290 NZ_JAATTN010000350.1 tRNAscan-SE tRNA 1010 1084 . - . ID=rna-HGK48_RS10290;Parent=gene-HGK48_RS10290;anticodon=(pos:complement(1050..1052));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS10290;product=tRNA-Gln NZ_JAATTN010000350.1 tRNAscan-SE exon 1010 1084 . - . ID=exon-HGK48_RS10290-1;Parent=rna-HGK48_RS10290;anticodon=(pos:complement(1050..1052));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS10290;product=tRNA-Gln ##sequence-region NZ_JAATTN010000351.1 1 1161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000351.1 RefSeq region 1 1161 . + . ID=NZ_JAATTN010000351.1:1..1161;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000351.1 RefSeq gene 1 976 . + . ID=gene-HGK48_RS10295;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=HGK48_RS10295;partial=true;start_range=.,1 NZ_JAATTN010000351.1 Protein Homology CDS 1 976 . + 1 ID=cds-WP_168236959.1;Parent=gene-HGK48_RS10295;Dbxref=GenBank:WP_168236959.1;Name=WP_168236959.1;Ontology_term=GO:0009435,GO:0008987;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731942.1;locus_tag=HGK48_RS10295;partial=true;product=quinolinate synthase NadA;protein_id=WP_168236959.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000352.1 1 1152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000352.1 RefSeq region 1 1152 . + . ID=NZ_JAATTN010000352.1:1..1152;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000352.1 RefSeq direct_repeat 149 1100 . + . ID=id-NZ_JAATTN010000352.1:149..1100;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=149..178;rpt_unit_seq=gtttcaacacaaacattgtcattagcaaac ##sequence-region NZ_JAATTN010000353.1 1 1055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000353.1 RefSeq region 1 1055 . + . ID=NZ_JAATTN010000353.1:1..1055;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000353.1 RefSeq gene 55 1055 . + . ID=gene-HGK48_RS10305;Name=HGK48_RS10305;end_range=1055,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10305;partial=true NZ_JAATTN010000353.1 Protein Homology CDS 55 1055 . + 0 ID=cds-WP_277346454.1;Parent=gene-HGK48_RS10305;Dbxref=GenBank:WP_277346454.1;Name=WP_277346454.1;Ontology_term=GO:0007165;end_range=1055,.;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731731.1;locus_tag=HGK48_RS10305;partial=true;product=PDC sensor domain-containing protein;protein_id=WP_277346454.1;transl_table=11 ##sequence-region NZ_JAATTN010000354.1 1 1129 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000354.1 RefSeq region 1 1129 . + . ID=NZ_JAATTN010000354.1:1..1129;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000354.1 RefSeq pseudogene 1 309 . - . ID=gene-HGK48_RS10310;Name=HGK48_RS10310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10310;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000354.1 GeneMarkS-2+ CDS 1 309 . - 0 ID=cds-HGK48_RS10310;Parent=gene-HGK48_RS10310;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10310;partial=true;product=glycosyltransferase family 9 protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000354.1 RefSeq pseudogene 403 1129 . - . ID=gene-HGK48_RS10315;Name=HGK48_RS10315;end_range=1129,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10315;partial=true;pseudo=true NZ_JAATTN010000354.1 GeneMarkS-2+ CDS 403 1129 . - 1 ID=cds-HGK48_RS10315;Parent=gene-HGK48_RS10315;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1129,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10315;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000355.1 1 1129 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000355.1 RefSeq region 1 1129 . + . ID=NZ_JAATTN010000355.1:1..1129;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000355.1 RefSeq gene 199 495 . - . ID=gene-HGK48_RS10320;Name=HGK48_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10320 NZ_JAATTN010000355.1 Protein Homology CDS 199 495 . - 0 ID=cds-WP_059431084.1;Parent=gene-HGK48_RS10320;Dbxref=GenBank:WP_059431084.1;Name=WP_059431084.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028087.6;locus_tag=HGK48_RS10320;product=ribbon-helix-helix domain-containing protein;protein_id=WP_059431084.1;transl_table=11 NZ_JAATTN010000355.1 RefSeq gene 498 1055 . - . ID=gene-HGK48_RS10325;Name=HGK48_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10325 NZ_JAATTN010000355.1 Protein Homology CDS 498 1055 . - 0 ID=cds-WP_059431083.1;Parent=gene-HGK48_RS10325;Dbxref=GenBank:WP_059431083.1;Name=WP_059431083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002782407.1;locus_tag=HGK48_RS10325;product=P-loop NTPase family protein;protein_id=WP_059431083.1;transl_table=11 ##sequence-region NZ_JAATTN010000356.1 1 1044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000356.1 RefSeq region 1 1044 . + . ID=NZ_JAATTN010000356.1:1..1044;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000356.1 RefSeq gene 1 1044 . - . ID=gene-HGK48_RS10330;Name=glmU;end_range=1044,.;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=HGK48_RS10330;partial=true;start_range=.,1 NZ_JAATTN010000356.1 Protein Homology CDS 1 1044 . - 0 ID=cds-WP_168236962.1;Parent=gene-HGK48_RS10330;Dbxref=GenBank:WP_168236962.1;Name=WP_168236962.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134,GO:0005737;end_range=1044,.;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012001543.1;locus_tag=HGK48_RS10330;partial=true;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_168236962.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000357.1 1 1120 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000357.1 RefSeq region 1 1120 . + . ID=NZ_JAATTN010000357.1:1..1120;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000357.1 RefSeq pseudogene 1 263 . + . ID=gene-HGK48_RS10335;Name=HGK48_RS10335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10335;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000357.1 Protein Homology CDS 1 263 . + 2 ID=cds-HGK48_RS10335;Parent=gene-HGK48_RS10335;Note=catalyzes the ATP-dependent carboxylation of a covalently attached biotin and the transfer of the carboxyl group to pyruvate forming oxaloacetate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731909.1;locus_tag=HGK48_RS10335;partial=true;product=acetyl-CoA carboxylase biotin carboxylase subunit;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000357.1 RefSeq gene 270 506 . + . ID=gene-HGK48_RS10340;Name=HGK48_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10340 NZ_JAATTN010000357.1 GeneMarkS-2+ CDS 270 506 . + 0 ID=cds-WP_002849076.1;Parent=gene-HGK48_RS10340;Dbxref=GenBank:WP_002849076.1;Name=WP_002849076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10340;product=hypothetical protein;protein_id=WP_002849076.1;transl_table=11 NZ_JAATTN010000357.1 RefSeq gene 493 1120 . + . ID=gene-HGK48_RS10345;Name=HGK48_RS10345;end_range=1120,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10345;partial=true NZ_JAATTN010000357.1 Protein Homology CDS 493 1120 . + 0 ID=cds-WP_168236963.1;Parent=gene-HGK48_RS10345;Dbxref=GenBank:WP_168236963.1;Name=WP_168236963.1;end_range=1120,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849077.1;locus_tag=HGK48_RS10345;partial=true;product=arginyltransferase;protein_id=WP_168236963.1;transl_table=11 ##sequence-region NZ_JAATTN010000358.1 1 1117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000358.1 RefSeq region 1 1117 . + . ID=NZ_JAATTN010000358.1:1..1117;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000358.1 RefSeq pseudogene 1 972 . - . ID=gene-HGK48_RS10350;Name=HGK48_RS10350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10350;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000358.1 Protein Homology CDS 1 972 . - 0 ID=cds-HGK48_RS10350;Parent=gene-HGK48_RS10350;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849380.1;locus_tag=HGK48_RS10350;partial=true;product=RNA degradosome polyphosphate kinase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000359.1 1 1016 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000359.1 RefSeq region 1 1016 . + . ID=NZ_JAATTN010000359.1:1..1016;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000359.1 RefSeq gene 1 181 . - . ID=gene-HGK48_RS10355;Name=HGK48_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10355;partial=true;start_range=.,1 NZ_JAATTN010000359.1 Protein Homology CDS 1 181 . - 0 ID=cds-WP_168236964.1;Parent=gene-HGK48_RS10355;Dbxref=GenBank:WP_168236964.1;Name=WP_168236964.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849619.1;locus_tag=HGK48_RS10355;partial=true;product=PHP domain-containing protein;protein_id=WP_168236964.1;start_range=.,1;transl_table=11 NZ_JAATTN010000359.1 RefSeq gene 595 671 . - . ID=gene-HGK48_RS10360;Name=HGK48_RS10360;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS10360 NZ_JAATTN010000359.1 tRNAscan-SE tRNA 595 671 . - . ID=rna-HGK48_RS10360;Parent=gene-HGK48_RS10360;anticodon=(pos:complement(635..637));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS10360;product=tRNA-Arg NZ_JAATTN010000359.1 tRNAscan-SE exon 595 671 . - . ID=exon-HGK48_RS10360-1;Parent=rna-HGK48_RS10360;anticodon=(pos:complement(635..637));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS10360;product=tRNA-Arg ##sequence-region NZ_JAATTN010000035.1 1 10394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000035.1 RefSeq region 1 10394 . + . ID=NZ_JAATTN010000035.1:1..10394;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000035.1 RefSeq gene 44 592 . - . ID=gene-HGK48_RS03035;Name=HGK48_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03035 NZ_JAATTN010000035.1 Protein Homology CDS 44 592 . - 0 ID=cds-WP_002850132.1;Parent=gene-HGK48_RS03035;Dbxref=GenBank:WP_002850132.1;Name=WP_002850132.1;Ontology_term=GO:0006801,GO:0005507,GO:0046872;gbkey=CDS;go_function=copper ion binding|0005507||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850132.1;locus_tag=HGK48_RS03035;product=superoxide dismutase family protein;protein_id=WP_002850132.1;transl_table=11 NZ_JAATTN010000035.1 RefSeq gene 720 810 . - . ID=gene-HGK48_RS03040;Name=HGK48_RS03040;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS03040 NZ_JAATTN010000035.1 tRNAscan-SE tRNA 720 810 . - . ID=rna-HGK48_RS03040;Parent=gene-HGK48_RS03040;anticodon=(pos:complement(774..776));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS03040;product=tRNA-Ser NZ_JAATTN010000035.1 tRNAscan-SE exon 720 810 . - . ID=exon-HGK48_RS03040-1;Parent=rna-HGK48_RS03040;anticodon=(pos:complement(774..776));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS03040;product=tRNA-Ser NZ_JAATTN010000035.1 RefSeq gene 868 1551 . - . ID=gene-HGK48_RS03045;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=HGK48_RS03045 NZ_JAATTN010000035.1 Protein Homology CDS 868 1551 . - 0 ID=cds-WP_002850135.1;Parent=gene-HGK48_RS03045;Dbxref=GenBank:WP_002850135.1;Name=WP_002850135.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850135.1;locus_tag=HGK48_RS03045;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_002850135.1;transl_table=11 NZ_JAATTN010000035.1 RefSeq gene 1551 1946 . - . ID=gene-HGK48_RS03050;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=HGK48_RS03050 NZ_JAATTN010000035.1 Protein Homology CDS 1551 1946 . - 0 ID=cds-WP_002850137.1;Parent=gene-HGK48_RS03050;Dbxref=GenBank:WP_002850137.1;Name=WP_002850137.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850137.1;locus_tag=HGK48_RS03050;product=transcription antitermination factor NusB;protein_id=WP_002850137.1;transl_table=11 NZ_JAATTN010000035.1 RefSeq gene 1948 2418 . - . ID=gene-HGK48_RS03055;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=HGK48_RS03055 NZ_JAATTN010000035.1 Protein Homology CDS 1948 2418 . - 0 ID=cds-WP_002850139.1;Parent=gene-HGK48_RS03055;Dbxref=GenBank:WP_002850139.1;Name=WP_002850139.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850139.1;locus_tag=HGK48_RS03055;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_002850139.1;transl_table=11 NZ_JAATTN010000035.1 RefSeq gene 2472 2792 . - . ID=gene-HGK48_RS03060;Name=HGK48_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03060 NZ_JAATTN010000035.1 Protein Homology CDS 2472 2792 . - 0 ID=cds-WP_002850141.1;Parent=gene-HGK48_RS03060;Dbxref=GenBank:WP_002850141.1;Name=WP_002850141.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732165.1;locus_tag=HGK48_RS03060;product=DMT family transporter;protein_id=WP_002850141.1;transl_table=11 NZ_JAATTN010000035.1 RefSeq gene 2792 3118 . - . ID=gene-HGK48_RS03065;Name=HGK48_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03065 NZ_JAATTN010000035.1 Protein Homology CDS 2792 3118 . - 0 ID=cds-WP_002850143.1;Parent=gene-HGK48_RS03065;Dbxref=GenBank:WP_002850143.1;Name=WP_002850143.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850143.1;locus_tag=HGK48_RS03065;product=DMT family transporter;protein_id=WP_002850143.1;transl_table=11 NZ_JAATTN010000035.1 RefSeq gene 3123 3917 . - . ID=gene-HGK48_RS03070;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=HGK48_RS03070 NZ_JAATTN010000035.1 Protein Homology CDS 3123 3917 . - 0 ID=cds-WP_024305412.1;Parent=gene-HGK48_RS03070;Dbxref=GenBank:WP_024305412.1;Name=WP_024305412.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009492863.1;locus_tag=HGK48_RS03070;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_024305412.1;transl_table=11 NZ_JAATTN010000035.1 RefSeq gene 3975 4865 . - . ID=gene-HGK48_RS03075;Name=HGK48_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03075 NZ_JAATTN010000035.1 Protein Homology CDS 3975 4865 . - 0 ID=cds-WP_168236672.1;Parent=gene-HGK48_RS03075;Dbxref=GenBank:WP_168236672.1;Name=WP_168236672.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850147.1;locus_tag=HGK48_RS03075;product=DMT family transporter;protein_id=WP_168236672.1;transl_table=11 NZ_JAATTN010000035.1 RefSeq gene 4993 6384 . + . ID=gene-HGK48_RS03080;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=HGK48_RS03080 NZ_JAATTN010000035.1 Protein Homology CDS 4993 6384 . + 0 ID=cds-WP_002850149.1;Parent=gene-HGK48_RS03080;Dbxref=GenBank:WP_002850149.1;Name=WP_002850149.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850149.1;locus_tag=HGK48_RS03080;product=ribosome biogenesis GTPase Der;protein_id=WP_002850149.1;transl_table=11 NZ_JAATTN010000035.1 RefSeq gene 6374 6907 . + . ID=gene-HGK48_RS03085;Name=HGK48_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03085 NZ_JAATTN010000035.1 Protein Homology CDS 6374 6907 . + 0 ID=cds-WP_002850151.1;Parent=gene-HGK48_RS03085;Dbxref=GenBank:WP_002850151.1;Name=WP_002850151.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850151.1;locus_tag=HGK48_RS03085;product=shikimate kinase;protein_id=WP_002850151.1;transl_table=11 NZ_JAATTN010000035.1 RefSeq gene 6911 7882 . + . ID=gene-HGK48_RS03090;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=HGK48_RS03090 NZ_JAATTN010000035.1 Protein Homology CDS 6911 7882 . + 0 ID=cds-WP_002850153.1;Parent=gene-HGK48_RS03090;Dbxref=GenBank:WP_002850153.1;Name=WP_002850153.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012001231.1;locus_tag=HGK48_RS03090;product=tryptophan--tRNA ligase;protein_id=WP_002850153.1;transl_table=11 NZ_JAATTN010000035.1 RefSeq gene 7892 9136 . + . ID=gene-HGK48_RS03095;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=HGK48_RS03095 NZ_JAATTN010000035.1 Protein Homology CDS 7892 9136 . + 0 ID=cds-WP_002850155.1;Parent=gene-HGK48_RS03095;Dbxref=GenBank:WP_002850155.1;Name=WP_002850155.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991926.1;locus_tag=HGK48_RS03095;product=serine--tRNA ligase;protein_id=WP_002850155.1;transl_table=11 NZ_JAATTN010000035.1 RefSeq gene 9146 10394 . + . ID=gene-HGK48_RS03100;Name=HGK48_RS03100;end_range=10394,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03100;partial=true NZ_JAATTN010000035.1 Protein Homology CDS 9146 10394 . + 0 ID=cds-WP_338153884.1;Parent=gene-HGK48_RS03100;Dbxref=GenBank:WP_338153884.1;Name=WP_338153884.1;end_range=10394,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732166.1;locus_tag=HGK48_RS03100;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_338153884.1;transl_table=11 ##sequence-region NZ_JAATTN010000360.1 1 1104 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000360.1 RefSeq region 1 1104 . + . ID=NZ_JAATTN010000360.1:1..1104;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000360.1 RefSeq gene 1 718 . - . ID=gene-HGK48_RS11485;Name=HGK48_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11485;partial=true;start_range=.,1 NZ_JAATTN010000360.1 Protein Homology CDS 1 718 . - 0 ID=cds-WP_168236965.1;Parent=gene-HGK48_RS11485;Dbxref=GenBank:WP_168236965.1;Name=WP_168236965.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF013648.6;locus_tag=HGK48_RS11485;partial=true;product=ABC transporter substrate-binding protein;protein_id=WP_168236965.1;start_range=.,1;transl_table=11 NZ_JAATTN010000360.1 RefSeq gene 715 1104 . - . ID=gene-HGK48_RS10370;Name=HGK48_RS10370;end_range=1104,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10370;partial=true NZ_JAATTN010000360.1 GeneMarkS-2+ CDS 715 1104 . - 0 ID=cds-WP_206120336.1;Parent=gene-HGK48_RS10370;Dbxref=GenBank:WP_206120336.1;Name=WP_206120336.1;end_range=1104,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10370;partial=true;product=hypothetical protein;protein_id=WP_206120336.1;transl_table=11 ##sequence-region NZ_JAATTN010000361.1 1 1097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000361.1 RefSeq region 1 1097 . + . ID=NZ_JAATTN010000361.1:1..1097;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000361.1 RefSeq gene 1 207 . + . ID=gene-HGK48_RS10375;Name=HGK48_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10375;partial=true;start_range=.,1 NZ_JAATTN010000361.1 Protein Homology CDS 1 207 . + 0 ID=cds-WP_168236966.1;Parent=gene-HGK48_RS10375;Dbxref=GenBank:WP_168236966.1;Name=WP_168236966.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: protein motif:HMM:NF012451.6;locus_tag=HGK48_RS10375;partial=true;product=J domain-containing protein;protein_id=WP_168236966.1;start_range=.,1;transl_table=11 NZ_JAATTN010000361.1 RefSeq gene 252 1025 . + . ID=gene-HGK48_RS10380;Name=HGK48_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10380 NZ_JAATTN010000361.1 Protein Homology CDS 252 1025 . + 0 ID=cds-WP_011731911.1;Parent=gene-HGK48_RS10380;Dbxref=GenBank:WP_011731911.1;Name=WP_011731911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731911.1;locus_tag=HGK48_RS10380;product=pyridoxine 5'-phosphate synthase;protein_id=WP_011731911.1;transl_table=11 ##sequence-region NZ_JAATTN010000362.1 1 1073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000362.1 RefSeq region 1 1073 . + . ID=NZ_JAATTN010000362.1:1..1073;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000362.1 RefSeq gene 243 1052 . - . ID=gene-HGK48_RS10390;Name=pgp3;gbkey=Gene;gene=pgp3;gene_biotype=protein_coding;locus_tag=HGK48_RS10390 NZ_JAATTN010000362.1 Protein Homology CDS 243 1052 . - 0 ID=cds-WP_011731974.1;Parent=gene-HGK48_RS10390;Dbxref=GenBank:WP_011731974.1;Name=WP_011731974.1;gbkey=CDS;gene=pgp3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731974.1;locus_tag=HGK48_RS10390;product=peptidoglycan metallopeptidase Pgp3;protein_id=WP_011731974.1;transl_table=11 ##sequence-region NZ_JAATTN010000363.1 1 1061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000363.1 RefSeq region 1 1061 . + . ID=NZ_JAATTN010000363.1:1..1061;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000363.1 RefSeq gene 1 1061 . - . ID=gene-HGK48_RS10395;Name=ftsA;end_range=1061,.;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=HGK48_RS10395;partial=true;start_range=.,1 NZ_JAATTN010000363.1 Protein Homology CDS 1 1061 . - 1 ID=cds-WP_168236968.1;Parent=gene-HGK48_RS10395;Dbxref=GenBank:WP_168236968.1;Name=WP_168236968.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;end_range=1061,.;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848960.1;locus_tag=HGK48_RS10395;partial=true;product=cell division protein FtsA;protein_id=WP_168236968.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000364.1 1 1058 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000364.1 RefSeq region 1 1058 . + . ID=NZ_JAATTN010000364.1:1..1058;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000364.1 RefSeq gene 153 1058 . + . ID=gene-HGK48_RS10400;Name=HGK48_RS10400;end_range=1058,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10400;partial=true NZ_JAATTN010000364.1 Protein Homology CDS 153 1058 . + 0 ID=cds-WP_168236969.1;Parent=gene-HGK48_RS10400;Dbxref=GenBank:WP_168236969.1;Name=WP_168236969.1;Ontology_term=GO:0006528,GO:0004067;end_range=1058,.;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006017793.1;locus_tag=HGK48_RS10400;partial=true;product=type II asparaginase;protein_id=WP_168236969.1;transl_table=11 ##sequence-region NZ_JAATTN010000365.1 1 1043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000365.1 RefSeq region 1 1043 . + . ID=NZ_JAATTN010000365.1:1..1043;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000365.1 RefSeq gene 1 1043 . - . ID=gene-HGK48_RS10405;Name=HGK48_RS10405;end_range=1043,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10405;partial=true;start_range=.,1 NZ_JAATTN010000365.1 Protein Homology CDS 1 1043 . - 2 ID=cds-WP_394352693.1;Parent=gene-HGK48_RS10405;Dbxref=GenBank:WP_394352693.1;Name=WP_394352693.1;Ontology_term=GO:0005515;end_range=1043,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850157.1;locus_tag=HGK48_RS10405;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_394352693.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000366.1 1 1031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000366.1 RefSeq region 1 1031 . + . ID=NZ_JAATTN010000366.1:1..1031;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000366.1 RefSeq gene 34 1031 . - . ID=gene-HGK48_RS10410;Name=HGK48_RS10410;end_range=1031,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10410;partial=true NZ_JAATTN010000366.1 Protein Homology CDS 34 1031 . - 2 ID=cds-WP_168236970.1;Parent=gene-HGK48_RS10410;Dbxref=GenBank:WP_168236970.1;Name=WP_168236970.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;end_range=1031,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848853.1;locus_tag=HGK48_RS10410;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_168236970.1;transl_table=11 ##sequence-region NZ_JAATTN010000367.1 1 1013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000367.1 RefSeq region 1 1013 . + . ID=NZ_JAATTN010000367.1:1..1013;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000367.1 RefSeq gene 205 1013 . - . ID=gene-HGK48_RS10415;Name=HGK48_RS10415;end_range=1013,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10415;partial=true NZ_JAATTN010000367.1 Protein Homology CDS 205 1013 . - 2 ID=cds-WP_168236971.1;Parent=gene-HGK48_RS10415;Dbxref=GenBank:WP_168236971.1;Name=WP_168236971.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;end_range=1013,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731986.1;locus_tag=HGK48_RS10415;partial=true;product=TonB-dependent siderophore receptor;protein_id=WP_168236971.1;transl_table=11 ##sequence-region NZ_JAATTN010000368.1 1 1010 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000368.1 RefSeq region 1 1010 . + . ID=NZ_JAATTN010000368.1:1..1010;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000368.1 RefSeq pseudogene 1 110 . + . ID=gene-HGK48_RS11490;Name=HGK48_RS11490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11490;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000368.1 Protein Homology CDS 1 110 . + 2 ID=cds-HGK48_RS11490;Parent=gene-HGK48_RS11490;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814348.1;locus_tag=HGK48_RS11490;partial=true;product=conjugal transfer protein TraL;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000368.1 RefSeq gene 230 478 . + . ID=gene-HGK48_RS10425;Name=HGK48_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10425 NZ_JAATTN010000368.1 Protein Homology CDS 230 478 . + 0 ID=cds-WP_035171227.1;Parent=gene-HGK48_RS10425;Dbxref=GenBank:WP_035171227.1;Name=WP_035171227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002838509.1;locus_tag=HGK48_RS10425;product=hypothetical protein;protein_id=WP_035171227.1;transl_table=11 NZ_JAATTN010000368.1 RefSeq gene 462 923 . + . ID=gene-HGK48_RS10430;Name=HGK48_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10430 NZ_JAATTN010000368.1 Protein Homology CDS 462 923 . + 0 ID=cds-WP_168236972.1;Parent=gene-HGK48_RS10430;Dbxref=GenBank:WP_168236972.1;Name=WP_168236972.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: protein motif:HMM:NF014691.6;locus_tag=HGK48_RS10430;product=Fic/DOC family protein;protein_id=WP_168236972.1;transl_table=11 ##sequence-region NZ_JAATTN010000369.1 1 998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000369.1 RefSeq region 1 998 . + . ID=NZ_JAATTN010000369.1:1..998;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000369.1 RefSeq pseudogene 1 518 . + . ID=gene-HGK48_RS10435;Name=HGK48_RS10435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10435;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000369.1 GeneMarkS-2+ CDS 1 518 . + 2 ID=cds-HGK48_RS10435;Parent=gene-HGK48_RS10435;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10435;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000369.1 RefSeq gene 476 808 . + . ID=gene-HGK48_RS10440;Name=HGK48_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10440 NZ_JAATTN010000369.1 GeneMarkS-2+ CDS 476 808 . + 0 ID=cds-WP_010404295.1;Parent=gene-HGK48_RS10440;Dbxref=GenBank:WP_010404295.1;Name=WP_010404295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10440;product=hypothetical protein;protein_id=WP_010404295.1;transl_table=11 ##sequence-region NZ_JAATTN010000036.1 1 10389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000036.1 RefSeq region 1 10389 . + . ID=NZ_JAATTN010000036.1:1..10389;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000036.1 RefSeq gene 188 263 . - . ID=gene-HGK48_RS03105;Name=HGK48_RS03105;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS03105 NZ_JAATTN010000036.1 tRNAscan-SE tRNA 188 263 . - . ID=rna-HGK48_RS03105;Parent=gene-HGK48_RS03105;anticodon=(pos:complement(228..230));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS03105;product=tRNA-Val NZ_JAATTN010000036.1 tRNAscan-SE exon 188 263 . - . ID=exon-HGK48_RS03105-1;Parent=rna-HGK48_RS03105;anticodon=(pos:complement(228..230));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS03105;product=tRNA-Val NZ_JAATTN010000036.1 RefSeq gene 317 763 . - . ID=gene-HGK48_RS03110;Name=HGK48_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03110 NZ_JAATTN010000036.1 Protein Homology CDS 317 763 . - 0 ID=cds-WP_002850804.1;Parent=gene-HGK48_RS03110;Dbxref=GenBank:WP_002850804.1;Name=WP_002850804.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850804.1;locus_tag=HGK48_RS03110;product=CopD family protein;protein_id=WP_002850804.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 827 1189 . - . ID=gene-HGK48_RS03115;Name=HGK48_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03115 NZ_JAATTN010000036.1 Protein Homology CDS 827 1189 . - 0 ID=cds-WP_002850805.1;Parent=gene-HGK48_RS03115;Dbxref=GenBank:WP_002850805.1;Name=WP_002850805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850805.1;locus_tag=HGK48_RS03115;product=NINE protein;protein_id=WP_002850805.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 1189 1632 . - . ID=gene-HGK48_RS03120;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=HGK48_RS03120 NZ_JAATTN010000036.1 Protein Homology CDS 1189 1632 . - 0 ID=cds-WP_002850807.1;Parent=gene-HGK48_RS03120;Dbxref=GenBank:WP_002850807.1;Name=WP_002850807.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850807.1;locus_tag=HGK48_RS03120;product=signal peptidase II;protein_id=WP_002850807.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 1625 2965 . - . ID=gene-HGK48_RS03125;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=HGK48_RS03125 NZ_JAATTN010000036.1 Protein Homology CDS 1625 2965 . - 0 ID=cds-WP_002850809.1;Parent=gene-HGK48_RS03125;Dbxref=GenBank:WP_002850809.1;Name=WP_002850809.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850809.1;locus_tag=HGK48_RS03125;product=phosphoglucosamine mutase;protein_id=WP_002850809.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 3170 3436 . + . ID=gene-HGK48_RS03130;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=HGK48_RS03130 NZ_JAATTN010000036.1 Protein Homology CDS 3170 3436 . + 0 ID=cds-WP_002850811.1;Parent=gene-HGK48_RS03130;Dbxref=GenBank:WP_002850811.1;Name=WP_002850811.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850811.1;locus_tag=HGK48_RS03130;product=30S ribosomal protein S20;protein_id=WP_002850811.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 3448 4515 . + . ID=gene-HGK48_RS03135;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=HGK48_RS03135 NZ_JAATTN010000036.1 Protein Homology CDS 3448 4515 . + 0 ID=cds-WP_002850812.1;Parent=gene-HGK48_RS03135;Dbxref=GenBank:WP_002850812.1;Name=WP_002850812.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344981.1;locus_tag=HGK48_RS03135;product=peptide chain release factor 1;protein_id=WP_002850812.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 4541 4891 . + . ID=gene-HGK48_RS03140;Name=HGK48_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03140 NZ_JAATTN010000036.1 Protein Homology CDS 4541 4891 . + 0 ID=cds-WP_002850814.1;Parent=gene-HGK48_RS03140;Dbxref=GenBank:WP_002850814.1;Name=WP_002850814.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850814.1;locus_tag=HGK48_RS03140;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_002850814.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 4892 5395 . - . ID=gene-HGK48_RS03145;Name=HGK48_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03145 NZ_JAATTN010000036.1 Protein Homology CDS 4892 5395 . - 0 ID=cds-WP_002850816.1;Parent=gene-HGK48_RS03145;Dbxref=GenBank:WP_002850816.1;Name=WP_002850816.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013053.7;locus_tag=HGK48_RS03145;product=isochorismatase family protein;protein_id=WP_002850816.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 5413 6171 . - . ID=gene-HGK48_RS03150;Name=HGK48_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03150 NZ_JAATTN010000036.1 Protein Homology CDS 5413 6171 . - 0 ID=cds-WP_002850817.1;Parent=gene-HGK48_RS03150;Dbxref=GenBank:WP_002850817.1;Name=WP_002850817.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009295089.1;locus_tag=HGK48_RS03150;product=exodeoxyribonuclease III;protein_id=WP_002850817.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 6294 7823 . + . ID=gene-HGK48_RS03155;Name=HGK48_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03155 NZ_JAATTN010000036.1 Protein Homology CDS 6294 7823 . + 0 ID=cds-WP_024305259.1;Parent=gene-HGK48_RS03155;Dbxref=GenBank:WP_024305259.1;Name=WP_024305259.1;Ontology_term=GO:0009244,GO:0016772,GO:0016776,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: protein motif:HMM:NF028537.1;locus_tag=HGK48_RS03155;product=phosphoethanolamine transferase;protein_id=WP_024305259.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 7820 8182 . + . ID=gene-HGK48_RS03160;Name=HGK48_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03160 NZ_JAATTN010000036.1 Protein Homology CDS 7820 8182 . + 0 ID=cds-WP_002850819.1;Parent=gene-HGK48_RS03160;Dbxref=GenBank:WP_002850819.1;Name=WP_002850819.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850819.1;locus_tag=HGK48_RS03160;product=diacylglycerol kinase;protein_id=WP_002850819.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 8149 8412 . + . ID=gene-HGK48_RS03165;Name=HGK48_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03165 NZ_JAATTN010000036.1 Protein Homology CDS 8149 8412 . + 0 ID=cds-WP_024305260.1;Parent=gene-HGK48_RS03165;Dbxref=GenBank:WP_024305260.1;Name=WP_024305260.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF017542.6;locus_tag=HGK48_RS03165;product=winged helix-turn-helix domain-containing protein;protein_id=WP_024305260.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq pseudogene 8390 8934 . - . ID=gene-HGK48_RS03170;Name=HGK48_RS03170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS03170;pseudo=true NZ_JAATTN010000036.1 Protein Homology CDS 8390 8934 . - 0 ID=cds-HGK48_RS03170;Parent=gene-HGK48_RS03170;Note=frameshifted;Ontology_term=GO:0071421,GO:0005384,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=manganese ion transmembrane transporter activity|0005384||IEA;go_process=manganese ion transmembrane transport|0071421||IEA;inference=COORDINATES: protein motif:HMM:NF014689.6;locus_tag=HGK48_RS03170;product=manganese efflux pump MntP;pseudo=true;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 9022 9930 . + . ID=gene-HGK48_RS03175;Name=HGK48_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03175 NZ_JAATTN010000036.1 Protein Homology CDS 9022 9930 . + 0 ID=cds-WP_002850823.1;Parent=gene-HGK48_RS03175;Dbxref=GenBank:WP_002850823.1;Name=WP_002850823.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850823.1;locus_tag=HGK48_RS03175;product=DMT family transporter;protein_id=WP_002850823.1;transl_table=11 NZ_JAATTN010000036.1 RefSeq gene 9927 10389 . - . ID=gene-HGK48_RS03180;Name=HGK48_RS03180;end_range=10389,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03180;partial=true NZ_JAATTN010000036.1 Protein Homology CDS 9927 10389 . - 1 ID=cds-WP_168236673.1;Parent=gene-HGK48_RS03180;Dbxref=GenBank:WP_168236673.1;Name=WP_168236673.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;end_range=10389,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732323.1;locus_tag=HGK48_RS03180;partial=true;product=metal ABC transporter permease;protein_id=WP_168236673.1;transl_table=11 ##sequence-region NZ_JAATTN010000370.1 1 983 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000370.1 RefSeq region 1 983 . + . ID=NZ_JAATTN010000370.1:1..983;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000370.1 RefSeq gene 1 728 . + . ID=gene-HGK48_RS10450;Name=HGK48_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10450;partial=true;start_range=.,1 NZ_JAATTN010000370.1 Protein Homology CDS 1 728 . + 2 ID=cds-WP_168236974.1;Parent=gene-HGK48_RS10450;Dbxref=GenBank:WP_168236974.1;Name=WP_168236974.1;Ontology_term=GO:0009435,GO:0008795;gbkey=CDS;go_function=NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849663.1;locus_tag=HGK48_RS10450;partial=true;product=NAD+ synthase;protein_id=WP_168236974.1;start_range=.,1;transl_table=11 NZ_JAATTN010000370.1 RefSeq gene 742 983 . + . ID=gene-HGK48_RS10455;Name=HGK48_RS10455;end_range=983,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10455;partial=true NZ_JAATTN010000370.1 Protein Homology CDS 742 983 . + 0 ID=cds-WP_168236975.1;Parent=gene-HGK48_RS10455;Dbxref=GenBank:WP_168236975.1;Name=WP_168236975.1;end_range=983,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849665.1;locus_tag=HGK48_RS10455;partial=true;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_168236975.1;transl_table=11 ##sequence-region NZ_JAATTN010000371.1 1 980 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000371.1 RefSeq region 1 980 . + . ID=NZ_JAATTN010000371.1:1..980;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000371.1 RefSeq gene 1 438 . + . ID=gene-HGK48_RS10460;Name=HGK48_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10460;partial=true;start_range=.,1 NZ_JAATTN010000371.1 Protein Homology CDS 1 438 . + 0 ID=cds-WP_168236976.1;Parent=gene-HGK48_RS10460;Dbxref=GenBank:WP_168236976.1;Name=WP_168236976.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849220.1;locus_tag=HGK48_RS10460;partial=true;product=EamA family transporter;protein_id=WP_168236976.1;start_range=.,1;transl_table=11 NZ_JAATTN010000371.1 RefSeq gene 431 865 . + . ID=gene-HGK48_RS10465;Name=HGK48_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10465 NZ_JAATTN010000371.1 GeneMarkS-2+ CDS 431 865 . + 0 ID=cds-WP_002849218.1;Parent=gene-HGK48_RS10465;Dbxref=GenBank:WP_002849218.1;Name=WP_002849218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10465;product=hypothetical protein;protein_id=WP_002849218.1;transl_table=11 ##sequence-region NZ_JAATTN010000372.1 1 977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000372.1 RefSeq region 1 977 . + . ID=NZ_JAATTN010000372.1:1..977;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000372.1 RefSeq gene 30 884 . - . ID=gene-HGK48_RS10470;Name=HGK48_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10470 NZ_JAATTN010000372.1 GeneMarkS-2+ CDS 30 884 . - 0 ID=cds-WP_059431066.1;Parent=gene-HGK48_RS10470;Dbxref=GenBank:WP_059431066.1;Name=WP_059431066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10470;product=hypothetical protein;protein_id=WP_059431066.1;transl_table=11 ##sequence-region NZ_JAATTN010000373.1 1 970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000373.1 RefSeq region 1 970 . + . ID=NZ_JAATTN010000373.1:1..970;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000373.1 RefSeq pseudogene 1 862 . + . ID=gene-HGK48_RS10475;Name=HGK48_RS10475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10475;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000373.1 Protein Homology CDS 1 862 . + 1 ID=cds-HGK48_RS10475;Parent=gene-HGK48_RS10475;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731830.1;locus_tag=HGK48_RS10475;partial=true;product=beta strand repeat-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000374.1 1 966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000374.1 RefSeq region 1 966 . + . ID=NZ_JAATTN010000374.1:1..966;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000374.1 RefSeq gene 1 148 . - . ID=gene-HGK48_RS11420;Name=HGK48_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11420;partial=true;start_range=.,1 NZ_JAATTN010000374.1 Protein Homology CDS 1 148 . - 0 ID=cds-WP_168236977.1;Parent=gene-HGK48_RS11420;Dbxref=GenBank:WP_168236977.1;Name=WP_168236977.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.6;locus_tag=HGK48_RS11420;partial=true;product=transporter substrate-binding domain-containing protein;protein_id=WP_168236977.1;start_range=.,1;transl_table=11 NZ_JAATTN010000374.1 RefSeq gene 176 904 . - . ID=gene-HGK48_RS10485;Name=HGK48_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10485 NZ_JAATTN010000374.1 Protein Homology CDS 176 904 . - 0 ID=cds-WP_011732131.1;Parent=gene-HGK48_RS10485;Dbxref=GenBank:WP_011732131.1;Name=WP_011732131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732131.1;locus_tag=HGK48_RS10485;product=basic amino acid ABC transporter substrate-binding protein;protein_id=WP_011732131.1;transl_table=11 ##sequence-region NZ_JAATTN010000375.1 1 960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000375.1 RefSeq region 1 960 . + . ID=NZ_JAATTN010000375.1:1..960;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000375.1 RefSeq gene 1 355 . + . ID=gene-HGK48_RS10490;Name=HGK48_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10490;partial=true;start_range=.,1 NZ_JAATTN010000375.1 Protein Homology CDS 1 355 . + 1 ID=cds-WP_206120337.1;Parent=gene-HGK48_RS10490;Dbxref=GenBank:WP_206120337.1;Name=WP_206120337.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849696.1;locus_tag=HGK48_RS10490;partial=true;product=FHIPEP family type III secretion protein;protein_id=WP_206120337.1;start_range=.,1;transl_table=11 NZ_JAATTN010000375.1 RefSeq gene 365 960 . + . ID=gene-HGK48_RS10495;Name=HGK48_RS10495;end_range=960,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10495;partial=true NZ_JAATTN010000375.1 Protein Homology CDS 365 960 . + 0 ID=cds-WP_394352694.1;Parent=gene-HGK48_RS10495;Dbxref=GenBank:WP_394352694.1;Name=WP_394352694.1;end_range=960,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849695.1;locus_tag=HGK48_RS10495;partial=true;product=DHH family phosphoesterase;protein_id=WP_394352694.1;transl_table=11 ##sequence-region NZ_JAATTN010000376.1 1 957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000376.1 RefSeq region 1 957 . + . ID=NZ_JAATTN010000376.1:1..957;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000376.1 RefSeq gene 1 957 . + . ID=gene-HGK48_RS10500;Name=htpG;end_range=957,.;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=HGK48_RS10500;partial=true;start_range=.,1 NZ_JAATTN010000376.1 Protein Homology CDS 1 957 . + 0 ID=cds-WP_168236978.1;Parent=gene-HGK48_RS10500;Dbxref=GenBank:WP_168236978.1;Name=WP_168236978.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;end_range=957,.;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002839601.1;locus_tag=HGK48_RS10500;partial=true;product=molecular chaperone HtpG;protein_id=WP_168236978.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000377.1 1 947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000377.1 RefSeq region 1 947 . + . ID=NZ_JAATTN010000377.1:1..947;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000377.1 RefSeq gene 1 423 . + . ID=gene-HGK48_RS10505;Name=HGK48_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10505;partial=true;start_range=.,1 NZ_JAATTN010000377.1 Protein Homology CDS 1 423 . + 0 ID=cds-WP_457550921.1;Parent=gene-HGK48_RS10505;Dbxref=GenBank:WP_457550921.1;Name=WP_457550921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010404288.1;locus_tag=HGK48_RS10505;partial=true;product=phage terminase large subunit family protein;protein_id=WP_457550921.1;start_range=.,1;transl_table=11 NZ_JAATTN010000377.1 RefSeq gene 420 890 . + . ID=gene-HGK48_RS10510;Name=HGK48_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10510 NZ_JAATTN010000377.1 Protein Homology CDS 420 890 . + 0 ID=cds-WP_002850362.1;Parent=gene-HGK48_RS10510;Dbxref=GenBank:WP_002850362.1;Name=WP_002850362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850362.1;locus_tag=HGK48_RS10510;product=HK97-gp10 family putative phage morphogenesis protein;protein_id=WP_002850362.1;transl_table=11 ##sequence-region NZ_JAATTN010000378.1 1 942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000378.1 RefSeq region 1 942 . + . ID=NZ_JAATTN010000378.1:1..942;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000378.1 RefSeq gene 1 230 . + . ID=gene-HGK48_RS10515;Name=HGK48_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10515;partial=true;start_range=.,1 NZ_JAATTN010000378.1 GeneMarkS-2+ CDS 1 230 . + 2 ID=cds-WP_206120338.1;Parent=gene-HGK48_RS10515;Dbxref=GenBank:WP_206120338.1;Name=WP_206120338.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10515;partial=true;product=hypothetical protein;protein_id=WP_206120338.1;start_range=.,1;transl_table=11 NZ_JAATTN010000378.1 RefSeq gene 327 942 . + . ID=gene-HGK48_RS10520;Name=HGK48_RS10520;end_range=942,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10520;partial=true NZ_JAATTN010000378.1 Protein Homology CDS 327 942 . + 0 ID=cds-WP_168236980.1;Parent=gene-HGK48_RS10520;Dbxref=GenBank:WP_168236980.1;Name=WP_168236980.1;end_range=942,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017591.6;locus_tag=HGK48_RS10520;partial=true;product=PhoX family protein;protein_id=WP_168236980.1;transl_table=11 ##sequence-region NZ_JAATTN010000379.1 1 939 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000379.1 RefSeq region 1 939 . + . ID=NZ_JAATTN010000379.1:1..939;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000379.1 RefSeq gene 1 386 . + . ID=gene-HGK48_RS10525;Name=HGK48_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10525;partial=true;start_range=.,1 NZ_JAATTN010000379.1 Protein Homology CDS 1 386 . + 2 ID=cds-WP_168236981.1;Parent=gene-HGK48_RS10525;Dbxref=GenBank:WP_168236981.1;Name=WP_168236981.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008339236.1;locus_tag=HGK48_RS10525;partial=true;product=c-type cytochrome;protein_id=WP_168236981.1;start_range=.,1;transl_table=11 NZ_JAATTN010000379.1 RefSeq gene 513 851 . + . ID=gene-HGK48_RS10530;Name=HGK48_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10530 NZ_JAATTN010000379.1 GeneMarkS-2+ CDS 513 851 . + 0 ID=cds-WP_240944849.1;Parent=gene-HGK48_RS10530;Dbxref=GenBank:WP_240944849.1;Name=WP_240944849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10530;product=hypothetical protein;protein_id=WP_240944849.1;transl_table=11 NZ_JAATTN010000379.1 RefSeq pseudogene 829 939 . - . ID=gene-HGK48_RS11330;Name=HGK48_RS11330;end_range=939,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11330;partial=true;pseudo=true;start_range=.,829 NZ_JAATTN010000379.1 Protein Homology CDS 829 939 . - 0 ID=cds-HGK48_RS11330;Parent=gene-HGK48_RS11330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=939,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848665.1;locus_tag=HGK48_RS11330;partial=true;product=cytochrome C;pseudo=true;start_range=.,829;transl_table=11 ##sequence-region NZ_JAATTN010000037.1 1 10318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000037.1 RefSeq region 1 10318 . + . ID=NZ_JAATTN010000037.1:1..10318;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000037.1 RefSeq gene 1 1208 . + . ID=gene-HGK48_RS03185;Name=HGK48_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03185;partial=true;start_range=.,1 NZ_JAATTN010000037.1 Protein Homology CDS 1 1208 . + 2 ID=cds-WP_168236674.1;Parent=gene-HGK48_RS03185;Dbxref=GenBank:WP_168236674.1;Name=WP_168236674.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009492322.1;locus_tag=HGK48_RS03185;partial=true;product=ABC transporter permease;protein_id=WP_168236674.1;start_range=.,1;transl_table=11 NZ_JAATTN010000037.1 RefSeq gene 1195 2325 . + . ID=gene-HGK48_RS03190;Name=HGK48_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03190 NZ_JAATTN010000037.1 Protein Homology CDS 1195 2325 . + 0 ID=cds-WP_002848871.1;Parent=gene-HGK48_RS03190;Dbxref=GenBank:WP_002848871.1;Name=WP_002848871.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731854.1;locus_tag=HGK48_RS03190;product=ABC transporter permease;protein_id=WP_002848871.1;transl_table=11 NZ_JAATTN010000037.1 RefSeq gene 2328 2990 . + . ID=gene-HGK48_RS03195;Name=HGK48_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03195 NZ_JAATTN010000037.1 Protein Homology CDS 2328 2990 . + 0 ID=cds-WP_002848872.1;Parent=gene-HGK48_RS03195;Dbxref=GenBank:WP_002848872.1;Name=WP_002848872.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848872.1;locus_tag=HGK48_RS03195;product=ABC transporter ATP-binding protein;protein_id=WP_002848872.1;transl_table=11 NZ_JAATTN010000037.1 RefSeq gene 2987 3484 . + . ID=gene-HGK48_RS03200;Name=HGK48_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03200 NZ_JAATTN010000037.1 Protein Homology CDS 2987 3484 . + 0 ID=cds-WP_002848875.1;Parent=gene-HGK48_RS03200;Dbxref=GenBank:WP_002848875.1;Name=WP_002848875.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848875.1;locus_tag=HGK48_RS03200;product=TlpA family protein disulfide reductase;protein_id=WP_002848875.1;transl_table=11 NZ_JAATTN010000037.1 RefSeq gene 3556 4527 . + . ID=gene-HGK48_RS03205;Name=HGK48_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03205 NZ_JAATTN010000037.1 Protein Homology CDS 3556 4527 . + 0 ID=cds-WP_002848884.1;Parent=gene-HGK48_RS03205;Dbxref=GenBank:WP_002848884.1;Name=WP_002848884.1;Ontology_term=GO:0009446,GO:0016813;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amidines|0016813||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011990318.1;locus_tag=HGK48_RS03205;product=agmatine deiminase family protein;protein_id=WP_002848884.1;transl_table=11 NZ_JAATTN010000037.1 RefSeq gene 4524 5399 . + . ID=gene-HGK48_RS03210;Name=HGK48_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03210 NZ_JAATTN010000037.1 Protein Homology CDS 4524 5399 . + 0 ID=cds-WP_002848886.1;Parent=gene-HGK48_RS03210;Dbxref=GenBank:WP_002848886.1;Name=WP_002848886.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848886.1;locus_tag=HGK48_RS03210;product=cation diffusion facilitator family transporter;protein_id=WP_002848886.1;transl_table=11 NZ_JAATTN010000037.1 RefSeq gene 5396 6265 . + . ID=gene-HGK48_RS03215;Name=HGK48_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03215 NZ_JAATTN010000037.1 Protein Homology CDS 5396 6265 . + 0 ID=cds-WP_002848887.1;Parent=gene-HGK48_RS03215;Dbxref=GenBank:WP_002848887.1;Name=WP_002848887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882793.1;locus_tag=HGK48_RS03215;product=carbon-nitrogen hydrolase;protein_id=WP_002848887.1;transl_table=11 NZ_JAATTN010000037.1 RefSeq gene 6304 7518 . - . ID=gene-HGK48_RS03220;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=HGK48_RS03220 NZ_JAATTN010000037.1 Protein Homology CDS 6304 7518 . - 0 ID=cds-WP_002848889.1;Parent=gene-HGK48_RS03220;Dbxref=GenBank:WP_002848889.1;Name=WP_002848889.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848889.1;locus_tag=HGK48_RS03220;product=sodium/glutamate symporter;protein_id=WP_002848889.1;transl_table=11 NZ_JAATTN010000037.1 RefSeq gene 7610 8230 . - . ID=gene-HGK48_RS03225;Name=HGK48_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03225 NZ_JAATTN010000037.1 Protein Homology CDS 7610 8230 . - 0 ID=cds-WP_002848890.1;Parent=gene-HGK48_RS03225;Dbxref=GenBank:WP_002848890.1;Name=WP_002848890.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848890.1;locus_tag=HGK48_RS03225;product=M48 family metallopeptidase;protein_id=WP_002848890.1;transl_table=11 NZ_JAATTN010000037.1 RefSeq gene 8206 9528 . - . ID=gene-HGK48_RS03230;Name=HGK48_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03230 NZ_JAATTN010000037.1 Protein Homology CDS 8206 9528 . - 0 ID=cds-WP_010401950.1;Parent=gene-HGK48_RS03230;Dbxref=GenBank:WP_010401950.1;Name=WP_010401950.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731859.1;locus_tag=HGK48_RS03230;product=MATE family efflux transporter;protein_id=WP_010401950.1;transl_table=11 NZ_JAATTN010000037.1 RefSeq gene 9525 10318 . - . ID=gene-HGK48_RS03235;Name=HGK48_RS03235;end_range=10318,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03235;partial=true NZ_JAATTN010000037.1 Protein Homology CDS 9525 10318 . - 2 ID=cds-WP_206120291.1;Parent=gene-HGK48_RS03235;Dbxref=GenBank:WP_206120291.1;Name=WP_206120291.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;end_range=10318,.;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014567.6;locus_tag=HGK48_RS03235;partial=true;product=sensor histidine kinase;protein_id=WP_206120291.1;transl_table=11 ##sequence-region NZ_JAATTN010000380.1 1 935 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000380.1 RefSeq region 1 935 . + . ID=NZ_JAATTN010000380.1:1..935;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000380.1 RefSeq pseudogene 1 218 . - . ID=gene-HGK48_RS10540;Name=HGK48_RS10540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10540;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000380.1 Protein Homology CDS 1 218 . - 0 ID=cds-HGK48_RS10540;Parent=gene-HGK48_RS10540;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849760.1;locus_tag=HGK48_RS10540;partial=true;product=ArsS family sensor histidine kinase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000380.1 RefSeq gene 215 886 . - . ID=gene-HGK48_RS10545;Name=HGK48_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10545 NZ_JAATTN010000380.1 Protein Homology CDS 215 886 . - 0 ID=cds-WP_002849759.1;Parent=gene-HGK48_RS10545;Dbxref=GenBank:WP_002849759.1;Name=WP_002849759.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344652.1;locus_tag=HGK48_RS10545;product=response regulator transcription factor;protein_id=WP_002849759.1;transl_table=11 ##sequence-region NZ_JAATTN010000381.1 1 932 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000381.1 RefSeq region 1 932 . + . ID=NZ_JAATTN010000381.1:1..932;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000381.1 RefSeq pseudogene 1 762 . + . ID=gene-HGK48_RS10550;Name=HGK48_RS10550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10550;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000381.1 Protein Homology CDS 1 762 . + 0 ID=cds-HGK48_RS10550;Parent=gene-HGK48_RS10550;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731843.1;locus_tag=HGK48_RS10550;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000382.1 1 920 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000382.1 RefSeq region 1 920 . + . ID=NZ_JAATTN010000382.1:1..920;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000382.1 RefSeq gene 110 676 . + . ID=gene-HGK48_RS10555;Name=HGK48_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10555 NZ_JAATTN010000382.1 Protein Homology CDS 110 676 . + 0 ID=cds-WP_002848064.1;Parent=gene-HGK48_RS10555;Dbxref=GenBank:WP_002848064.1;Name=WP_002848064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016647263.1;locus_tag=HGK48_RS10555;product=YceI family protein;protein_id=WP_002848064.1;transl_table=11 NZ_JAATTN010000382.1 RefSeq gene 737 920 . - . ID=gene-HGK48_RS10560;Name=HGK48_RS10560;end_range=920,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10560;partial=true NZ_JAATTN010000382.1 Protein Homology CDS 737 920 . - 1 ID=cds-WP_277346456.1;Parent=gene-HGK48_RS10560;Dbxref=GenBank:WP_277346456.1;Name=WP_277346456.1;Ontology_term=GO:0008199;end_range=920,.;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848063.1;locus_tag=HGK48_RS10560;partial=true;product=ferritin-like domain-containing protein;protein_id=WP_277346456.1;transl_table=11 ##sequence-region NZ_JAATTN010000383.1 1 917 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000383.1 RefSeq region 1 917 . + . ID=NZ_JAATTN010000383.1:1..917;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000383.1 RefSeq gene 1 902 . - . ID=gene-HGK48_RS10565;Name=HGK48_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10565;partial=true;start_range=.,1 NZ_JAATTN010000383.1 Protein Homology CDS 1 902 . - 0 ID=cds-WP_168236982.1;Parent=gene-HGK48_RS10565;Dbxref=GenBank:WP_168236982.1;Name=WP_168236982.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017197.7;locus_tag=HGK48_RS10565;partial=true;product=DUF748 domain-containing protein;protein_id=WP_168236982.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000384.1 1 915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000384.1 RefSeq region 1 915 . + . ID=NZ_JAATTN010000384.1:1..915;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000384.1 RefSeq gene 1 859 . - . ID=gene-HGK48_RS10570;Name=HGK48_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10570;partial=true;start_range=.,1 NZ_JAATTN010000384.1 Protein Homology CDS 1 859 . - 0 ID=cds-WP_168236983.1;Parent=gene-HGK48_RS10570;Dbxref=GenBank:WP_168236983.1;Name=WP_168236983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849167.1;locus_tag=HGK48_RS10570;partial=true;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_168236983.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000385.1 1 835 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000385.1 RefSeq region 1 835 . + . ID=NZ_JAATTN010000385.1:1..835;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000385.1 RefSeq gene 1 328 . + . ID=gene-HGK48_RS10575;Name=HGK48_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10575;partial=true;start_range=.,1 NZ_JAATTN010000385.1 Protein Homology CDS 1 328 . + 1 ID=cds-WP_277346457.1;Parent=gene-HGK48_RS10575;Dbxref=GenBank:WP_277346457.1;Name=WP_277346457.1;Ontology_term=GO:0015740,GO:0015556,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344094.1;locus_tag=HGK48_RS10575;partial=true;product=anaerobic C4-dicarboxylate transporter family protein;protein_id=WP_277346457.1;start_range=.,1;transl_table=11 NZ_JAATTN010000385.1 RefSeq gene 426 835 . + . ID=gene-HGK48_RS10580;Name=HGK48_RS10580;end_range=835,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10580;partial=true NZ_JAATTN010000385.1 Protein Homology CDS 426 835 . + 0 ID=cds-WP_168236984.1;Parent=gene-HGK48_RS10580;Dbxref=GenBank:WP_168236984.1;Name=WP_168236984.1;end_range=835,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848137.1;locus_tag=HGK48_RS10580;partial=true;product=DUF411 domain-containing protein;protein_id=WP_168236984.1;transl_table=11 ##sequence-region NZ_JAATTN010000386.1 1 832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000386.1 RefSeq region 1 832 . + . ID=NZ_JAATTN010000386.1:1..832;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000386.1 RefSeq gene 1 610 . - . ID=gene-HGK48_RS10585;Name=HGK48_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10585;partial=true;start_range=.,1 NZ_JAATTN010000386.1 Protein Homology CDS 1 610 . - 0 ID=cds-WP_168236985.1;Parent=gene-HGK48_RS10585;Dbxref=GenBank:WP_168236985.1;Name=WP_168236985.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF006502.0;locus_tag=HGK48_RS10585;partial=true;product=adenylosuccinate lyase;protein_id=WP_168236985.1;start_range=.,1;transl_table=11 NZ_JAATTN010000386.1 RefSeq gene 667 819 . - . ID=gene-HGK48_RS11425;Name=HGK48_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11425 NZ_JAATTN010000386.1 Protein Homology CDS 667 819 . - 0 ID=cds-WP_338153897.1;Parent=gene-HGK48_RS11425;Dbxref=GenBank:WP_338153897.1;Name=WP_338153897.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016277.6;locus_tag=HGK48_RS11425;product=hypothetical protein;protein_id=WP_338153897.1;transl_table=11 ##sequence-region NZ_JAATTN010000387.1 1 907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000387.1 RefSeq region 1 907 . + . ID=NZ_JAATTN010000387.1:1..907;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000387.1 RefSeq pseudogene 1 464 . + . ID=gene-HGK48_RS10595;Name=HGK48_RS10595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10595;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000387.1 Protein Homology CDS 1 464 . + 2 ID=cds-HGK48_RS10595;Parent=gene-HGK48_RS10595;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848665.1;locus_tag=HGK48_RS10595;partial=true;product=cytochrome C;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000387.1 RefSeq gene 461 907 . + . ID=gene-HGK48_RS10600;Name=HGK48_RS10600;end_range=907,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10600;partial=true NZ_JAATTN010000387.1 Protein Homology CDS 461 907 . + 0 ID=cds-WP_394352695.1;Parent=gene-HGK48_RS10600;Dbxref=GenBank:WP_394352695.1;Name=WP_394352695.1;end_range=907,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848666.1;locus_tag=HGK48_RS10600;partial=true;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_394352695.1;transl_table=11 ##sequence-region NZ_JAATTN010000388.1 1 828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000388.1 RefSeq region 1 828 . + . ID=NZ_JAATTN010000388.1:1..828;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000388.1 RefSeq gene 1 683 . + . ID=gene-HGK48_RS10605;Name=HGK48_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10605;partial=true;start_range=.,1 NZ_JAATTN010000388.1 Protein Homology CDS 1 683 . + 2 ID=cds-WP_457550922.1;Parent=gene-HGK48_RS10605;Dbxref=GenBank:WP_457550922.1;Name=WP_457550922.1;Ontology_term=GO:0006281,GO:0003684;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: protein motif:HMM:NF023227.6;locus_tag=HGK48_RS10605;partial=true;product=DinB/UmuC family translesion DNA polymerase;protein_id=WP_457550922.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000389.1 1 819 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000389.1 RefSeq region 1 819 . + . ID=NZ_JAATTN010000389.1:1..819;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000389.1 RefSeq gene 29 819 . + . ID=gene-HGK48_RS10610;Name=HGK48_RS10610;end_range=819,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10610;partial=true NZ_JAATTN010000389.1 Protein Homology CDS 29 819 . + 0 ID=cds-WP_168236986.1;Parent=gene-HGK48_RS10610;Dbxref=GenBank:WP_168236986.1;Name=WP_168236986.1;Ontology_term=GO:0005524,GO:0016887;end_range=819,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF013776.6;locus_tag=HGK48_RS10610;partial=true;product=AAA family ATPase;protein_id=WP_168236986.1;transl_table=11 ##sequence-region NZ_JAATTN010000038.1 1 10272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000038.1 RefSeq region 1 10272 . + . ID=NZ_JAATTN010000038.1:1..10272;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000038.1 RefSeq gene 1 1937 . - . ID=gene-HGK48_RS03240;Name=HGK48_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03240;partial=true;start_range=.,1 NZ_JAATTN010000038.1 Protein Homology CDS 1 1937 . - 0 ID=cds-WP_168236676.1;Parent=gene-HGK48_RS03240;Dbxref=GenBank:WP_168236676.1;Name=WP_168236676.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012801.6;locus_tag=HGK48_RS03240;partial=true;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_168236676.1;start_range=.,1;transl_table=11 NZ_JAATTN010000038.1 RefSeq gene 2039 2962 . + . ID=gene-HGK48_RS03245;Name=HGK48_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03245 NZ_JAATTN010000038.1 Protein Homology CDS 2039 2962 . + 0 ID=cds-WP_002849869.1;Parent=gene-HGK48_RS03245;Dbxref=GenBank:WP_002849869.1;Name=WP_002849869.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=HGK48_RS03245;product=helix-turn-helix transcriptional regulator;protein_id=WP_002849869.1;transl_table=11 NZ_JAATTN010000038.1 RefSeq gene 3009 4847 . - . ID=gene-HGK48_RS03250;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=HGK48_RS03250 NZ_JAATTN010000038.1 Protein Homology CDS 3009 4847 . - 0 ID=cds-WP_002849872.1;Parent=gene-HGK48_RS03250;Dbxref=GenBank:WP_002849872.1;Name=WP_002849872.1;Ontology_term=GO:0008033,GO:0004808,GO:0016645;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: protein motif:HMM:NF002481.0;locus_tag=HGK48_RS03250;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_002849872.1;transl_table=11 NZ_JAATTN010000038.1 RefSeq gene 4844 6463 . - . ID=gene-HGK48_RS03255;Name=HGK48_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03255 NZ_JAATTN010000038.1 Protein Homology CDS 4844 6463 . - 0 ID=cds-WP_002849874.1;Parent=gene-HGK48_RS03255;Dbxref=GenBank:WP_002849874.1;Name=WP_002849874.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004319544.1;locus_tag=HGK48_RS03255;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=WP_002849874.1;transl_table=11 NZ_JAATTN010000038.1 RefSeq gene 6447 7559 . - . ID=gene-HGK48_RS03260;Name=HGK48_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03260 NZ_JAATTN010000038.1 Protein Homology CDS 6447 7559 . - 0 ID=cds-WP_002849876.1;Parent=gene-HGK48_RS03260;Dbxref=GenBank:WP_002849876.1;Name=WP_002849876.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849876.1;locus_tag=HGK48_RS03260;product=nitronate monooxygenase;protein_id=WP_002849876.1;transl_table=11 NZ_JAATTN010000038.1 RefSeq gene 7559 8767 . - . ID=gene-HGK48_RS03265;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=HGK48_RS03265 NZ_JAATTN010000038.1 Protein Homology CDS 7559 8767 . - 0 ID=cds-WP_002849878.1;Parent=gene-HGK48_RS03265;Dbxref=GenBank:WP_002849878.1;Name=WP_002849878.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849878.1;locus_tag=HGK48_RS03265;product=tyrosine--tRNA ligase;protein_id=WP_002849878.1;transl_table=11 NZ_JAATTN010000038.1 RefSeq pseudogene 8769 10163 . - . ID=gene-HGK48_RS03270;Name=HGK48_RS03270;end_range=10163,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS03270;partial=true;pseudo=true NZ_JAATTN010000038.1 Protein Homology CDS 8769 10163 . - 0 ID=cds-HGK48_RS03270;Parent=gene-HGK48_RS03270;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=10163,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849880.1;locus_tag=HGK48_RS03270;partial=true;product=TGS domain-containing protein;pseudo=true;transl_table=11 NZ_JAATTN010000038.1 RefSeq gene 10166 10272 . + . ID=gene-HGK48_RS03275;Name=HGK48_RS03275;end_range=10272,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03275;partial=true NZ_JAATTN010000038.1 Protein Homology CDS 10166 10272 . + 0 ID=cds-WP_168236677.1;Parent=gene-HGK48_RS03275;Dbxref=GenBank:WP_168236677.1;Name=WP_168236677.1;end_range=10272,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024724.6;locus_tag=HGK48_RS03275;partial=true;product=HD domain-containing protein;protein_id=WP_168236677.1;transl_table=11 ##sequence-region NZ_JAATTN010000390.1 1 818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000390.1 RefSeq region 1 818 . + . ID=NZ_JAATTN010000390.1:1..818;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000390.1 RefSeq gene 71 427 . + . ID=gene-HGK48_RS10615;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=HGK48_RS10615 NZ_JAATTN010000390.1 Protein Homology CDS 71 427 . + 0 ID=cds-WP_002849599.1;Parent=gene-HGK48_RS10615;Dbxref=GenBank:WP_002849599.1;Name=WP_002849599.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344132.1;locus_tag=HGK48_RS10615;product=50S ribosomal protein L19;protein_id=WP_002849599.1;transl_table=11 NZ_JAATTN010000390.1 RefSeq gene 535 732 . + . ID=gene-HGK48_RS10620;Name=HGK48_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10620 NZ_JAATTN010000390.1 GeneMarkS-2+ CDS 535 732 . + 0 ID=cds-WP_240944850.1;Parent=gene-HGK48_RS10620;Dbxref=GenBank:WP_240944850.1;Name=WP_240944850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10620;product=hypothetical protein;protein_id=WP_240944850.1;transl_table=11 ##sequence-region NZ_JAATTN010000391.1 1 896 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000391.1 RefSeq region 1 896 . + . ID=NZ_JAATTN010000391.1:1..896;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000391.1 RefSeq gene 85 896 . + . ID=gene-HGK48_RS10630;Name=HGK48_RS10630;end_range=896,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10630;partial=true NZ_JAATTN010000391.1 Protein Homology CDS 85 896 . + 0 ID=cds-WP_168236987.1;Parent=gene-HGK48_RS10630;Dbxref=GenBank:WP_168236987.1;Name=WP_168236987.1;Ontology_term=GO:0007165,GO:0000155;end_range=896,.;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850001.1;locus_tag=HGK48_RS10630;partial=true;product=sensor histidine kinase;protein_id=WP_168236987.1;transl_table=11 ##sequence-region NZ_JAATTN010000392.1 1 895 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000392.1 RefSeq region 1 895 . + . ID=NZ_JAATTN010000392.1:1..895;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000392.1 RefSeq pseudogene 1 412 . + . ID=gene-HGK48_RS10635;Name=HGK48_RS10635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10635;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000392.1 Protein Homology CDS 1 412 . + 1 ID=cds-HGK48_RS10635;Parent=gene-HGK48_RS10635;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942366.1;locus_tag=HGK48_RS10635;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000392.1 RefSeq gene 388 705 . + . ID=gene-HGK48_RS10640;Name=HGK48_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10640 NZ_JAATTN010000392.1 GeneMarkS-2+ CDS 388 705 . + 0 ID=cds-WP_002849067.1;Parent=gene-HGK48_RS10640;Dbxref=GenBank:WP_002849067.1;Name=WP_002849067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10640;product=hypothetical protein;protein_id=WP_002849067.1;transl_table=11 ##sequence-region NZ_JAATTN010000393.1 1 879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000393.1 RefSeq region 1 879 . + . ID=NZ_JAATTN010000393.1:1..879;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000393.1 RefSeq pseudogene 1 166 . + . ID=gene-HGK48_RS11335;Name=HGK48_RS11335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11335;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000393.1 Protein Homology CDS 1 166 . + 1 ID=cds-HGK48_RS11335;Parent=gene-HGK48_RS11335;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849702.1;locus_tag=HGK48_RS11335;partial=true;product=ABC transporter permease;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000393.1 RefSeq gene 168 879 . + . ID=gene-HGK48_RS10655;Name=HGK48_RS10655;end_range=879,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10655;partial=true NZ_JAATTN010000393.1 Protein Homology CDS 168 879 . + 0 ID=cds-WP_168236989.1;Parent=gene-HGK48_RS10655;Dbxref=GenBank:WP_168236989.1;Name=WP_168236989.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;end_range=879,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002776579.1;locus_tag=HGK48_RS10655;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_168236989.1;transl_table=11 ##sequence-region NZ_JAATTN010000394.1 1 723 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000394.1 RefSeq region 1 723 . + . ID=NZ_JAATTN010000394.1:1..723;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000394.1 RefSeq pseudogene 19 723 . - . ID=gene-HGK48_RS10660;Name=HGK48_RS10660;end_range=723,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10660;partial=true;pseudo=true NZ_JAATTN010000394.1 Protein Homology CDS 19 723 . - 0 ID=cds-HGK48_RS10660;Parent=gene-HGK48_RS10660;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=723,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732162.1;locus_tag=HGK48_RS10660;partial=true;product=DNA-directed RNA polymerase subunit beta';pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000395.1 1 866 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000395.1 RefSeq region 1 866 . + . ID=NZ_JAATTN010000395.1:1..866;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000395.1 RefSeq gene 167 439 . - . ID=gene-HGK48_RS10665;Name=HGK48_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10665 NZ_JAATTN010000395.1 Protein Homology CDS 167 439 . - 0 ID=cds-WP_010398810.1;Parent=gene-HGK48_RS10665;Dbxref=GenBank:WP_010398810.1;Name=WP_010398810.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010398810.1;locus_tag=HGK48_RS10665;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_010398810.1;transl_table=11 NZ_JAATTN010000395.1 RefSeq gene 432 680 . - . ID=gene-HGK48_RS10670;Name=HGK48_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10670 NZ_JAATTN010000395.1 GeneMarkS-2+ CDS 432 680 . - 0 ID=cds-WP_010398813.1;Parent=gene-HGK48_RS10670;Dbxref=GenBank:WP_010398813.1;Name=WP_010398813.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10670;product=hypothetical protein;protein_id=WP_010398813.1;transl_table=11 ##sequence-region NZ_JAATTN010000396.1 1 857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000396.1 RefSeq region 1 857 . + . ID=NZ_JAATTN010000396.1:1..857;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000396.1 RefSeq gene 57 710 . - . ID=gene-HGK48_RS10675;Name=HGK48_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10675 NZ_JAATTN010000396.1 Protein Homology CDS 57 710 . - 0 ID=cds-WP_024305265.1;Parent=gene-HGK48_RS10675;Dbxref=GenBank:WP_024305265.1;Name=WP_024305265.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002947009.1;locus_tag=HGK48_RS10675;product=superoxide dismutase;protein_id=WP_024305265.1;transl_table=11 ##sequence-region NZ_JAATTN010000397.1 1 855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000397.1 RefSeq region 1 855 . + . ID=NZ_JAATTN010000397.1:1..855;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000397.1 RefSeq gene 1 855 . + . ID=gene-HGK48_RS10685;Name=HGK48_RS10685;end_range=855,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10685;partial=true;start_range=.,1 NZ_JAATTN010000397.1 GeneMarkS-2+ CDS 1 855 . + 2 ID=cds-WP_168236990.1;Parent=gene-HGK48_RS10685;Dbxref=GenBank:WP_168236990.1;Name=WP_168236990.1;end_range=855,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10685;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_168236990.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000398.1 1 848 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000398.1 RefSeq region 1 848 . + . ID=NZ_JAATTN010000398.1:1..848;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000398.1 RefSeq gene 128 848 . - . ID=gene-HGK48_RS10690;Name=pdxA;end_range=848,.;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=HGK48_RS10690;partial=true NZ_JAATTN010000398.1 Protein Homology CDS 128 848 . - 1 ID=cds-WP_168236991.1;Parent=gene-HGK48_RS10690;Dbxref=GenBank:WP_168236991.1;Name=WP_168236991.1;Ontology_term=GO:0051287;end_range=848,.;gbkey=CDS;gene=pdxA;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731912.1;locus_tag=HGK48_RS10690;partial=true;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=WP_168236991.1;transl_table=11 ##sequence-region NZ_JAATTN010000399.1 1 834 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000399.1 RefSeq region 1 834 . + . ID=NZ_JAATTN010000399.1:1..834;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000399.1 RefSeq gene 66 365 . - . ID=gene-HGK48_RS10695;Name=HGK48_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10695 NZ_JAATTN010000399.1 GeneMarkS-2+ CDS 66 365 . - 0 ID=cds-WP_002850360.1;Parent=gene-HGK48_RS10695;Dbxref=GenBank:WP_002850360.1;Name=WP_002850360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10695;product=hypothetical protein;protein_id=WP_002850360.1;transl_table=11 NZ_JAATTN010000399.1 RefSeq pseudogene 341 834 . - . ID=gene-HGK48_RS10700;Name=HGK48_RS10700;end_range=834,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10700;partial=true;pseudo=true NZ_JAATTN010000399.1 GeneMarkS-2+ CDS 341 834 . - 2 ID=cds-HGK48_RS10700;Parent=gene-HGK48_RS10700;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=834,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10700;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000039.1 1 9893 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000039.1 RefSeq region 1 9893 . + . ID=NZ_JAATTN010000039.1:1..9893;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000039.1 RefSeq pseudogene 1 408 . + . ID=gene-HGK48_RS03280;Name=HGK48_RS03280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS03280;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000039.1 Protein Homology CDS 1 408 . + 0 ID=cds-HGK48_RS03280;Parent=gene-HGK48_RS03280;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949647.1;locus_tag=HGK48_RS03280;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000039.1 RefSeq gene 395 823 . + . ID=gene-HGK48_RS03285;Name=HGK48_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03285 NZ_JAATTN010000039.1 GeneMarkS-2+ CDS 395 823 . + 0 ID=cds-WP_024305331.1;Parent=gene-HGK48_RS03285;Dbxref=GenBank:WP_024305331.1;Name=WP_024305331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS03285;product=hypothetical protein;protein_id=WP_024305331.1;transl_table=11 NZ_JAATTN010000039.1 RefSeq gene 1041 2261 . + . ID=gene-HGK48_RS03290;Name=HGK48_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03290 NZ_JAATTN010000039.1 Protein Homology CDS 1041 2261 . + 0 ID=cds-WP_025370317.1;Parent=gene-HGK48_RS03290;Dbxref=GenBank:WP_025370317.1;Name=WP_025370317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848586.1;locus_tag=HGK48_RS03290;product=major outer membrane protein;protein_id=WP_025370317.1;transl_table=11 NZ_JAATTN010000039.1 RefSeq gene 2538 3758 . + . ID=gene-HGK48_RS03295;Name=HGK48_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03295 NZ_JAATTN010000039.1 Protein Homology CDS 2538 3758 . + 0 ID=cds-WP_002848586.1;Parent=gene-HGK48_RS03295;Dbxref=GenBank:WP_002848586.1;Name=WP_002848586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848586.1;locus_tag=HGK48_RS03295;product=major outer membrane protein;protein_id=WP_002848586.1;transl_table=11 NZ_JAATTN010000039.1 RefSeq gene 3882 4451 . + . ID=gene-HGK48_RS03300;Name=HGK48_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03300 NZ_JAATTN010000039.1 Protein Homology CDS 3882 4451 . + 0 ID=cds-WP_002848590.1;Parent=gene-HGK48_RS03300;Dbxref=GenBank:WP_002848590.1;Name=WP_002848590.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848590.1;locus_tag=HGK48_RS03300;product=c-type cytochrome;protein_id=WP_002848590.1;transl_table=11 NZ_JAATTN010000039.1 RefSeq gene 4596 5714 . + . ID=gene-HGK48_RS03305;Name=HGK48_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03305 NZ_JAATTN010000039.1 Protein Homology CDS 4596 5714 . + 0 ID=cds-WP_002848592.1;Parent=gene-HGK48_RS03305;Dbxref=GenBank:WP_002848592.1;Name=WP_002848592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002853461.1;locus_tag=HGK48_RS03305;product=ABC transporter substrate-binding protein;protein_id=WP_002848592.1;transl_table=11 NZ_JAATTN010000039.1 RefSeq gene 5989 6885 . + . ID=gene-HGK48_RS03310;Name=HGK48_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03310 NZ_JAATTN010000039.1 Protein Homology CDS 5989 6885 . + 0 ID=cds-WP_002848594.1;Parent=gene-HGK48_RS03310;Dbxref=GenBank:WP_002848594.1;Name=WP_002848594.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848594.1;locus_tag=HGK48_RS03310;product=branched-chain amino acid ABC transporter permease;protein_id=WP_002848594.1;transl_table=11 NZ_JAATTN010000039.1 RefSeq gene 6885 7943 . + . ID=gene-HGK48_RS03315;Name=HGK48_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03315 NZ_JAATTN010000039.1 Protein Homology CDS 6885 7943 . + 0 ID=cds-WP_372682840.1;Parent=gene-HGK48_RS03315;Dbxref=GenBank:WP_372682840.1;Name=WP_372682840.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012856280.1;locus_tag=HGK48_RS03315;product=branched-chain amino acid ABC transporter permease;protein_id=WP_372682840.1;transl_table=11 NZ_JAATTN010000039.1 RefSeq gene 7940 8704 . + . ID=gene-HGK48_RS03320;Name=HGK48_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03320 NZ_JAATTN010000039.1 Protein Homology CDS 7940 8704 . + 0 ID=cds-WP_002848597.1;Parent=gene-HGK48_RS03320;Dbxref=GenBank:WP_002848597.1;Name=WP_002848597.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848597.1;locus_tag=HGK48_RS03320;product=ABC transporter ATP-binding protein;protein_id=WP_002848597.1;transl_table=11 NZ_JAATTN010000039.1 RefSeq gene 8701 9396 . + . ID=gene-HGK48_RS03325;Name=HGK48_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03325 NZ_JAATTN010000039.1 Protein Homology CDS 8701 9396 . + 0 ID=cds-WP_002848598.1;Parent=gene-HGK48_RS03325;Dbxref=GenBank:WP_002848598.1;Name=WP_002848598.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848598.1;locus_tag=HGK48_RS03325;product=ABC transporter ATP-binding protein;protein_id=WP_002848598.1;transl_table=11 NZ_JAATTN010000039.1 RefSeq gene 9467 9893 . + . ID=gene-HGK48_RS03330;Name=HGK48_RS03330;end_range=9893,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03330;partial=true NZ_JAATTN010000039.1 Protein Homology CDS 9467 9893 . + 0 ID=cds-WP_168236678.1;Parent=gene-HGK48_RS03330;Dbxref=GenBank:WP_168236678.1;Name=WP_168236678.1;end_range=9893,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848599.1;locus_tag=HGK48_RS03330;partial=true;product=cytochrome c biogenesis protein ResB;protein_id=WP_168236678.1;transl_table=11 ##sequence-region NZ_JAATTN010000003.1 1 24212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000003.1 RefSeq region 1 24212 . + . ID=NZ_JAATTN010000003.1:1..24212;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000003.1 RefSeq gene 1 1004 . + . ID=gene-HGK48_RS00345;Name=HGK48_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00345;partial=true;start_range=.,1 NZ_JAATTN010000003.1 Protein Homology CDS 1 1004 . + 2 ID=cds-WP_240944797.1;Parent=gene-HGK48_RS00345;Dbxref=GenBank:WP_240944797.1;Name=WP_240944797.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848283.1;locus_tag=HGK48_RS00345;partial=true;product=DNA polymerase;protein_id=WP_240944797.1;start_range=.,1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 1076 1846 . + . ID=gene-HGK48_RS00350;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=HGK48_RS00350 NZ_JAATTN010000003.1 Protein Homology CDS 1076 1846 . + 0 ID=cds-WP_011731745.1;Parent=gene-HGK48_RS00350;Dbxref=GenBank:WP_011731745.1;Name=WP_011731745.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731745.1;locus_tag=HGK48_RS00350;product=flagellar motor stator protein MotA;protein_id=WP_011731745.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 1855 2571 . + . ID=gene-HGK48_RS00355;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=HGK48_RS00355 NZ_JAATTN010000003.1 Protein Homology CDS 1855 2571 . + 0 ID=cds-WP_011731746.1;Parent=gene-HGK48_RS00355;Dbxref=GenBank:WP_011731746.1;Name=WP_011731746.1;gbkey=CDS;gene=motB;inference=COORDINATES: protein motif:HMM:NF006285.1;locus_tag=HGK48_RS00355;product=flagellar motor protein MotB;protein_id=WP_011731746.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 2708 2989 . + . ID=gene-HGK48_RS00360;Name=HGK48_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00360 NZ_JAATTN010000003.1 Protein Homology CDS 2708 2989 . + 0 ID=cds-WP_002848287.1;Parent=gene-HGK48_RS00360;Dbxref=GenBank:WP_002848287.1;Name=WP_002848287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848287.1;locus_tag=HGK48_RS00360;product=DUF362 domain-containing protein;protein_id=WP_002848287.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 3093 3506 . + . ID=gene-HGK48_RS00365;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=HGK48_RS00365 NZ_JAATTN010000003.1 Protein Homology CDS 3093 3506 . + 0 ID=cds-WP_002848288.1;Parent=gene-HGK48_RS00365;Dbxref=GenBank:WP_002848288.1;Name=WP_002848288.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343770.1;locus_tag=HGK48_RS00365;product=nucleoside-diphosphate kinase;protein_id=WP_002848288.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 3522 3887 . + . ID=gene-HGK48_RS00370;Name=HGK48_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00370 NZ_JAATTN010000003.1 Protein Homology CDS 3522 3887 . + 0 ID=cds-WP_002848289.1;Parent=gene-HGK48_RS00370;Dbxref=GenBank:WP_002848289.1;Name=WP_002848289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848289.1;locus_tag=HGK48_RS00370;product=hypothetical protein;protein_id=WP_002848289.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 3889 4035 . + . ID=gene-HGK48_RS00375;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=HGK48_RS00375 NZ_JAATTN010000003.1 Protein Homology CDS 3889 4035 . + 0 ID=cds-WP_002848290.1;Parent=gene-HGK48_RS00375;Dbxref=GenBank:WP_002848290.1;Name=WP_002848290.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942540.1;locus_tag=HGK48_RS00375;product=50S ribosomal protein L32;protein_id=WP_002848290.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 4045 5034 . + . ID=gene-HGK48_RS00380;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=HGK48_RS00380 NZ_JAATTN010000003.1 Protein Homology CDS 4045 5034 . + 0 ID=cds-WP_011731747.1;Parent=gene-HGK48_RS00380;Dbxref=GenBank:WP_011731747.1;Name=WP_011731747.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012001307.1;locus_tag=HGK48_RS00380;product=phosphate acyltransferase PlsX;protein_id=WP_011731747.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 5042 6028 . + . ID=gene-HGK48_RS00385;Name=HGK48_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00385 NZ_JAATTN010000003.1 Protein Homology CDS 5042 6028 . + 0 ID=cds-WP_002848291.1;Parent=gene-HGK48_RS00385;Dbxref=GenBank:WP_002848291.1;Name=WP_002848291.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848291.1;locus_tag=HGK48_RS00385;product=beta-ketoacyl-ACP synthase III;protein_id=WP_002848291.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 6102 7229 . + . ID=gene-HGK48_RS00390;Name=HGK48_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00390 NZ_JAATTN010000003.1 GeneMarkS-2+ CDS 6102 7229 . + 0 ID=cds-WP_002848293.1;Parent=gene-HGK48_RS00390;Dbxref=GenBank:WP_002848293.1;Name=WP_002848293.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00390;product=PilZ domain-containing protein;protein_id=WP_002848293.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 7226 9430 . + . ID=gene-HGK48_RS00395;Name=HGK48_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00395 NZ_JAATTN010000003.1 Protein Homology CDS 7226 9430 . + 0 ID=cds-WP_002848295.1;Parent=gene-HGK48_RS00395;Dbxref=GenBank:WP_002848295.1;Name=WP_002848295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012109344.1;locus_tag=HGK48_RS00395;product=helicase HerA domain-containing protein;protein_id=WP_002848295.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 9440 10057 . + . ID=gene-HGK48_RS00400;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=HGK48_RS00400 NZ_JAATTN010000003.1 Protein Homology CDS 9440 10057 . + 0 ID=cds-WP_002848297.1;Parent=gene-HGK48_RS00400;Dbxref=GenBank:WP_002848297.1;Name=WP_002848297.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848297.1;locus_tag=HGK48_RS00400;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_002848297.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 10054 10371 . + . ID=gene-HGK48_RS00405;Name=HGK48_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00405 NZ_JAATTN010000003.1 Protein Homology CDS 10054 10371 . + 0 ID=cds-WP_002848299.1;Parent=gene-HGK48_RS00405;Dbxref=GenBank:WP_002848299.1;Name=WP_002848299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848299.1;locus_tag=HGK48_RS00405;product=dihydroneopterin aldolase;protein_id=WP_002848299.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 10450 11121 . + . ID=gene-HGK48_RS00410;Name=hsrA;gbkey=Gene;gene=hsrA;gene_biotype=protein_coding;locus_tag=HGK48_RS00410 NZ_JAATTN010000003.1 Protein Homology CDS 10450 11121 . + 0 ID=cds-WP_002848301.1;Parent=gene-HGK48_RS00410;Dbxref=GenBank:WP_002848301.1;Name=WP_002848301.1;gbkey=CDS;gene=hsrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343793.1;locus_tag=HGK48_RS00410;product=homeostatic response regulator transcription factor HsrA;protein_id=WP_002848301.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 11160 12425 . + . ID=gene-HGK48_RS00415;Name=HGK48_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00415 NZ_JAATTN010000003.1 Protein Homology CDS 11160 12425 . + 0 ID=cds-WP_024305307.1;Parent=gene-HGK48_RS00415;Dbxref=GenBank:WP_024305307.1;Name=WP_024305307.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005871262.1;locus_tag=HGK48_RS00415;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_024305307.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 12472 12723 . + . ID=gene-HGK48_RS00420;Name=HGK48_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00420 NZ_JAATTN010000003.1 Protein Homology CDS 12472 12723 . + 0 ID=cds-WP_002848303.1;Parent=gene-HGK48_RS00420;Dbxref=GenBank:WP_002848303.1;Name=WP_002848303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848303.1;locus_tag=HGK48_RS00420;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_002848303.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 12723 14201 . + . ID=gene-HGK48_RS00425;Name=HGK48_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00425 NZ_JAATTN010000003.1 Protein Homology CDS 12723 14201 . + 0 ID=cds-WP_002848304.1;Parent=gene-HGK48_RS00425;Dbxref=GenBank:WP_002848304.1;Name=WP_002848304.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848304.1;locus_tag=HGK48_RS00425;product=Ppx/GppA phosphatase family protein;protein_id=WP_002848304.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 14202 14816 . - . ID=gene-HGK48_RS00430;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=HGK48_RS00430 NZ_JAATTN010000003.1 Protein Homology CDS 14202 14816 . - 0 ID=cds-WP_002848305.1;Parent=gene-HGK48_RS00430;Dbxref=GenBank:WP_002848305.1;Name=WP_002848305.1;gbkey=CDS;gene=recO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848305.1;locus_tag=HGK48_RS00430;product=recombination protein RecO;protein_id=WP_002848305.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 14818 15738 . - . ID=gene-HGK48_RS00435;Name=HGK48_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00435 NZ_JAATTN010000003.1 Protein Homology CDS 14818 15738 . - 0 ID=cds-WP_002848306.1;Parent=gene-HGK48_RS00435;Dbxref=GenBank:WP_002848306.1;Name=WP_002848306.1;Ontology_term=GO:0008033,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848306.1;locus_tag=HGK48_RS00435;product=tRNA dihydrouridine synthase;protein_id=WP_002848306.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 15735 16739 . - . ID=gene-HGK48_RS00440;Name=HGK48_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00440 NZ_JAATTN010000003.1 GeneMarkS-2+ CDS 15735 16739 . - 0 ID=cds-WP_010401708.1;Parent=gene-HGK48_RS00440;Dbxref=GenBank:WP_010401708.1;Name=WP_010401708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00440;product=hypothetical protein;protein_id=WP_010401708.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 16736 17104 . - . ID=gene-HGK48_RS00445;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=HGK48_RS00445 NZ_JAATTN010000003.1 Protein Homology CDS 16736 17104 . - 0 ID=cds-WP_002848307.1;Parent=gene-HGK48_RS00445;Dbxref=GenBank:WP_002848307.1;Name=WP_002848307.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848307.1;locus_tag=HGK48_RS00445;product=RNA polymerase-binding protein DksA;protein_id=WP_002848307.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 17114 17563 . - . ID=gene-HGK48_RS00450;Name=HGK48_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00450 NZ_JAATTN010000003.1 Protein Homology CDS 17114 17563 . - 0 ID=cds-WP_011731749.1;Parent=gene-HGK48_RS00450;Dbxref=GenBank:WP_011731749.1;Name=WP_011731749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009649352.1;locus_tag=HGK48_RS00450;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_011731749.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 17563 18444 . - . ID=gene-HGK48_RS00455;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=HGK48_RS00455 NZ_JAATTN010000003.1 Protein Homology CDS 17563 18444 . - 0 ID=cds-WP_002848311.1;Parent=gene-HGK48_RS00455;Dbxref=GenBank:WP_002848311.1;Name=WP_002848311.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848311.1;locus_tag=HGK48_RS00455;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_002848311.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 18679 19275 . + . ID=gene-HGK48_RS00460;Name=HGK48_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00460 NZ_JAATTN010000003.1 Protein Homology CDS 18679 19275 . + 0 ID=cds-WP_002848312.1;Parent=gene-HGK48_RS00460;Dbxref=GenBank:WP_002848312.1;Name=WP_002848312.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343772.1;locus_tag=HGK48_RS00460;product=peroxiredoxin;protein_id=WP_002848312.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 19396 19596 . + . ID=gene-HGK48_RS00465;Name=HGK48_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00465 NZ_JAATTN010000003.1 GeneMarkS-2+ CDS 19396 19596 . + 0 ID=cds-WP_168236621.1;Parent=gene-HGK48_RS00465;Dbxref=GenBank:WP_168236621.1;Name=WP_168236621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00465;product=hypothetical protein;protein_id=WP_168236621.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 19589 19783 . + . ID=gene-HGK48_RS00470;Name=HGK48_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00470 NZ_JAATTN010000003.1 GeneMarkS-2+ CDS 19589 19783 . + 0 ID=cds-WP_168236622.1;Parent=gene-HGK48_RS00470;Dbxref=GenBank:WP_168236622.1;Name=WP_168236622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00470;product=hypothetical protein;protein_id=WP_168236622.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 19913 20992 . - . ID=gene-HGK48_RS00475;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=HGK48_RS00475 NZ_JAATTN010000003.1 Protein Homology CDS 19913 20992 . - 0 ID=cds-WP_002848319.1;Parent=gene-HGK48_RS00475;Dbxref=GenBank:WP_002848319.1;Name=WP_002848319.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848319.1;locus_tag=HGK48_RS00475;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_002848319.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 21004 22167 . - . ID=gene-HGK48_RS00480;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=HGK48_RS00480 NZ_JAATTN010000003.1 Protein Homology CDS 21004 22167 . - 0 ID=cds-WP_011731750.1;Parent=gene-HGK48_RS00480;Dbxref=GenBank:WP_011731750.1;Name=WP_011731750.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731750.1;locus_tag=HGK48_RS00480;product=exodeoxyribonuclease VII large subunit;protein_id=WP_011731750.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 22164 22880 . - . ID=gene-HGK48_RS00485;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=HGK48_RS00485 NZ_JAATTN010000003.1 Protein Homology CDS 22164 22880 . - 0 ID=cds-WP_011731751.1;Parent=gene-HGK48_RS00485;Dbxref=GenBank:WP_011731751.1;Name=WP_011731751.1;Ontology_term=GO:0042372,GO:0052624;gbkey=CDS;gene=ubiE;go_function=2-phytyl-1%2C4-naphthoquinone methyltransferase activity|0052624||IEA;go_process=phylloquinone biosynthetic process|0042372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731751.1;locus_tag=HGK48_RS00485;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_011731751.1;transl_table=11 NZ_JAATTN010000003.1 RefSeq gene 22881 24212 . - . ID=gene-HGK48_RS00490;Name=HGK48_RS00490;end_range=24212,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00490;partial=true NZ_JAATTN010000003.1 GeneMarkS-2+ CDS 22881 24212 . - 0 ID=cds-WP_168236623.1;Parent=gene-HGK48_RS00490;Dbxref=GenBank:WP_168236623.1;Name=WP_168236623.1;end_range=24212,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00490;partial=true;product=CYTH domain-containing protein;protein_id=WP_168236623.1;transl_table=11 ##sequence-region NZ_JAATTN010000400.1 1 831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000400.1 RefSeq region 1 831 . + . ID=NZ_JAATTN010000400.1:1..831;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000400.1 RefSeq gene 1 215 . - . ID=gene-HGK48_RS10705;Name=HGK48_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10705;partial=true;start_range=.,1 NZ_JAATTN010000400.1 Protein Homology CDS 1 215 . - 0 ID=cds-WP_457550923.1;Parent=gene-HGK48_RS10705;Dbxref=GenBank:WP_457550923.1;Name=WP_457550923.1;Ontology_term=GO:0006281;gbkey=CDS;go_process=DNA repair|0006281||IEA;inference=COORDINATES: protein motif:HMM:NF013015.6;locus_tag=HGK48_RS10705;partial=true;product=Y-family DNA polymerase;protein_id=WP_457550923.1;start_range=.,1;transl_table=11 NZ_JAATTN010000400.1 RefSeq gene 218 831 . - . ID=gene-HGK48_RS10710;Name=HGK48_RS10710;end_range=831,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10710;partial=true NZ_JAATTN010000400.1 Protein Homology CDS 218 831 . - 2 ID=cds-WP_168236993.1;Parent=gene-HGK48_RS10710;Dbxref=GenBank:WP_168236993.1;Name=WP_168236993.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;end_range=831,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848625.1;locus_tag=HGK48_RS10710;partial=true;product=HAD-IC family P-type ATPase;protein_id=WP_168236993.1;transl_table=11 ##sequence-region NZ_JAATTN010000401.1 1 831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000401.1 RefSeq region 1 831 . + . ID=NZ_JAATTN010000401.1:1..831;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000401.1 RefSeq gene 1 831 . + . ID=gene-HGK48_RS10715;Name=HGK48_RS10715;end_range=831,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10715;partial=true;start_range=.,1 NZ_JAATTN010000401.1 Protein Homology CDS 1 831 . + 0 ID=cds-WP_168236994.1;Parent=gene-HGK48_RS10715;Dbxref=GenBank:WP_168236994.1;Name=WP_168236994.1;end_range=831,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.6;locus_tag=HGK48_RS10715;partial=true;product=TonB-dependent receptor domain-containing protein;protein_id=WP_168236994.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000402.1 1 740 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000402.1 RefSeq region 1 740 . + . ID=NZ_JAATTN010000402.1:1..740;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000402.1 RefSeq gene 1 740 . + . ID=gene-HGK48_RS10720;Name=HGK48_RS10720;end_range=740,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10720;partial=true;start_range=.,1 NZ_JAATTN010000402.1 Protein Homology CDS 1 740 . + 0 ID=cds-WP_168236995.1;Parent=gene-HGK48_RS10720;Dbxref=GenBank:WP_168236995.1;Name=WP_168236995.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;end_range=740,.;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731970.1;locus_tag=HGK48_RS10720;partial=true;product=glycine--tRNA ligase subunit beta;protein_id=WP_168236995.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000403.1 1 816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000403.1 RefSeq region 1 816 . + . ID=NZ_JAATTN010000403.1:1..816;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000403.1 RefSeq gene 1 813 . + . ID=gene-HGK48_RS10725;Name=HGK48_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10725;partial=true;start_range=.,1 NZ_JAATTN010000403.1 Protein Homology CDS 1 813 . + 0 ID=cds-WP_168236996.1;Parent=gene-HGK48_RS10725;Dbxref=GenBank:WP_168236996.1;Name=WP_168236996.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF014867.6;locus_tag=HGK48_RS10725;partial=true;product=lactate/malate family dehydrogenase;protein_id=WP_168236996.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000404.1 1 815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000404.1 RefSeq region 1 815 . + . ID=NZ_JAATTN010000404.1:1..815;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000404.1 RefSeq gene 88 558 . - . ID=gene-HGK48_RS10730;Name=HGK48_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10730 NZ_JAATTN010000404.1 GeneMarkS-2+ CDS 88 558 . - 0 ID=cds-WP_024305397.1;Parent=gene-HGK48_RS10730;Dbxref=GenBank:WP_024305397.1;Name=WP_024305397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10730;product=hypothetical protein;protein_id=WP_024305397.1;transl_table=11 NZ_JAATTN010000404.1 RefSeq gene 597 803 . - . ID=gene-HGK48_RS10735;Name=HGK48_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10735 NZ_JAATTN010000404.1 GeneMarkS-2+ CDS 597 803 . - 0 ID=cds-WP_010404198.1;Parent=gene-HGK48_RS10735;Dbxref=GenBank:WP_010404198.1;Name=WP_010404198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10735;product=hypothetical protein;protein_id=WP_010404198.1;transl_table=11 ##sequence-region NZ_JAATTN010000405.1 1 812 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000405.1 RefSeq region 1 812 . + . ID=NZ_JAATTN010000405.1:1..812;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000405.1 RefSeq gene 1 812 . - . ID=gene-HGK48_RS10740;Name=HGK48_RS10740;end_range=812,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10740;partial=true;start_range=.,1 NZ_JAATTN010000405.1 GeneMarkS-2+ CDS 1 812 . - 1 ID=cds-WP_168236997.1;Parent=gene-HGK48_RS10740;Dbxref=GenBank:WP_168236997.1;Name=WP_168236997.1;end_range=812,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10740;partial=true;product=hypothetical protein;protein_id=WP_168236997.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000406.1 1 801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000406.1 RefSeq region 1 801 . + . ID=NZ_JAATTN010000406.1:1..801;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000406.1 RefSeq gene 1 801 . + . ID=gene-HGK48_RS10745;Name=HGK48_RS10745;end_range=801,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=HGK48_RS10745;partial=true;start_range=.,1 NZ_JAATTN010000406.1 cmsearch rRNA 1 801 . + . ID=rna-HGK48_RS10745;Parent=gene-HGK48_RS10745;Dbxref=RFAM:RF00177;end_range=801,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS10745;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JAATTN010000406.1 cmsearch exon 1 801 . + . ID=exon-HGK48_RS10745-1;Parent=rna-HGK48_RS10745;Dbxref=RFAM:RF00177;end_range=801,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS10745;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAATTN010000407.1 1 785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000407.1 RefSeq region 1 785 . + . ID=NZ_JAATTN010000407.1:1..785;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000407.1 RefSeq gene 1 621 . + . ID=gene-HGK48_RS10750;Name=HGK48_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10750;partial=true;start_range=.,1 NZ_JAATTN010000407.1 Protein Homology CDS 1 621 . + 0 ID=cds-WP_168236998.1;Parent=gene-HGK48_RS10750;Dbxref=GenBank:WP_168236998.1;Name=WP_168236998.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014999.6;locus_tag=HGK48_RS10750;partial=true;product=ATP-binding protein;protein_id=WP_168236998.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000408.1 1 780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000408.1 RefSeq region 1 780 . + . ID=NZ_JAATTN010000408.1:1..780;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000408.1 RefSeq gene 58 780 . + . ID=gene-HGK48_RS10755;Name=HGK48_RS10755;end_range=780,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10755;partial=true NZ_JAATTN010000408.1 Protein Homology CDS 58 780 . + 0 ID=cds-WP_206120339.1;Parent=gene-HGK48_RS10755;Dbxref=GenBank:WP_206120339.1;Name=WP_206120339.1;Ontology_term=GO:0055085,GO:0016020;end_range=780,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732054.1;locus_tag=HGK48_RS10755;partial=true;product=SLC13 family permease;protein_id=WP_206120339.1;transl_table=11 ##sequence-region NZ_JAATTN010000409.1 1 779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000409.1 RefSeq region 1 779 . + . ID=NZ_JAATTN010000409.1:1..779;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000409.1 RefSeq pseudogene 1 677 . - . ID=gene-HGK48_RS10760;Name=HGK48_RS10760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10760;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000409.1 Protein Homology CDS 1 677 . - 0 ID=cds-HGK48_RS10760;Parent=gene-HGK48_RS10760;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850476.1;locus_tag=HGK48_RS10760;partial=true;product=glutamate synthase large subunit;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000040.1 1 9691 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000040.1 RefSeq region 1 9691 . + . ID=NZ_JAATTN010000040.1:1..9691;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000040.1 RefSeq gene 1 729 . - . ID=gene-HGK48_RS03335;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=HGK48_RS03335;partial=true;start_range=.,1 NZ_JAATTN010000040.1 Protein Homology CDS 1 729 . - 0 ID=cds-WP_168236679.1;Parent=gene-HGK48_RS03335;Dbxref=GenBank:WP_168236679.1;Name=WP_168236679.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: protein motif:HMM:NF005196.1;locus_tag=HGK48_RS03335;partial=true;product=flagellar assembly protein FliH;protein_id=WP_168236679.1;start_range=.,1;transl_table=11 NZ_JAATTN010000040.1 RefSeq gene 726 1754 . - . ID=gene-HGK48_RS03340;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=HGK48_RS03340 NZ_JAATTN010000040.1 Protein Homology CDS 726 1754 . - 0 ID=cds-WP_002848349.1;Parent=gene-HGK48_RS03340;Dbxref=GenBank:WP_002848349.1;Name=WP_002848349.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343757.1;locus_tag=HGK48_RS03340;product=flagellar motor switch protein FliG;protein_id=WP_002848349.1;transl_table=11 NZ_JAATTN010000040.1 RefSeq gene 1754 3460 . - . ID=gene-HGK48_RS03345;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=HGK48_RS03345 NZ_JAATTN010000040.1 Protein Homology CDS 1754 3460 . - 0 ID=cds-WP_002848351.1;Parent=gene-HGK48_RS03345;Dbxref=GenBank:WP_002848351.1;Name=WP_002848351.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848351.1;locus_tag=HGK48_RS03345;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_002848351.1;transl_table=11 NZ_JAATTN010000040.1 RefSeq gene 3467 4567 . - . ID=gene-HGK48_RS03350;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=HGK48_RS03350 NZ_JAATTN010000040.1 Protein Homology CDS 3467 4567 . - 0 ID=cds-WP_002848353.1;Parent=gene-HGK48_RS03350;Dbxref=GenBank:WP_002848353.1;Name=WP_002848353.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731759.1;locus_tag=HGK48_RS03350;product=histidinol-phosphate transaminase;protein_id=WP_002848353.1;transl_table=11 NZ_JAATTN010000040.1 RefSeq gene 4570 5646 . - . ID=gene-HGK48_RS03355;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=HGK48_RS03355 NZ_JAATTN010000040.1 Protein Homology CDS 4570 5646 . - 0 ID=cds-WP_002848356.1;Parent=gene-HGK48_RS03355;Dbxref=GenBank:WP_002848356.1;Name=WP_002848356.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848356.1;locus_tag=HGK48_RS03355;product=prephenate dehydratase;protein_id=WP_002848356.1;transl_table=11 NZ_JAATTN010000040.1 RefSeq gene 5633 6412 . - . ID=gene-HGK48_RS03360;Name=HGK48_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03360 NZ_JAATTN010000040.1 Protein Homology CDS 5633 6412 . - 0 ID=cds-WP_011731760.1;Parent=gene-HGK48_RS03360;Dbxref=GenBank:WP_011731760.1;Name=WP_011731760.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731760.1;locus_tag=HGK48_RS03360;product=HAD-IIA family hydrolase;protein_id=WP_011731760.1;transl_table=11 NZ_JAATTN010000040.1 RefSeq gene 6412 7623 . - . ID=gene-HGK48_RS03365;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=HGK48_RS03365 NZ_JAATTN010000040.1 Protein Homology CDS 6412 7623 . - 0 ID=cds-WP_002848358.1;Parent=gene-HGK48_RS03365;Dbxref=GenBank:WP_002848358.1;Name=WP_002848358.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848358.1;locus_tag=HGK48_RS03365;product=diaminopimelate decarboxylase;protein_id=WP_002848358.1;transl_table=11 NZ_JAATTN010000040.1 RefSeq gene 7836 8897 . - . ID=gene-HGK48_RS03370;Name=HGK48_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03370 NZ_JAATTN010000040.1 Protein Homology CDS 7836 8897 . - 0 ID=cds-WP_002848360.1;Parent=gene-HGK48_RS03370;Dbxref=GenBank:WP_002848360.1;Name=WP_002848360.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848360.1;locus_tag=HGK48_RS03370;product=LptF/LptG family permease;protein_id=WP_002848360.1;transl_table=11 NZ_JAATTN010000040.1 RefSeq gene 9022 9660 . + . ID=gene-HGK48_RS03375;Name=HGK48_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03375 NZ_JAATTN010000040.1 Protein Homology CDS 9022 9660 . + 0 ID=cds-WP_168236680.1;Parent=gene-HGK48_RS03375;Dbxref=GenBank:WP_168236680.1;Name=WP_168236680.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF020893.6;locus_tag=HGK48_RS03375;product=TVP38/TMEM64 family protein;protein_id=WP_168236680.1;transl_table=11 ##sequence-region NZ_JAATTN010000410.1 1 773 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000410.1 RefSeq region 1 773 . + . ID=NZ_JAATTN010000410.1:1..773;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000410.1 RefSeq gene 1 702 . + . ID=gene-HGK48_RS10765;Name=HGK48_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10765;partial=true;start_range=.,1 NZ_JAATTN010000410.1 Protein Homology CDS 1 702 . + 0 ID=cds-WP_168236999.1;Parent=gene-HGK48_RS10765;Dbxref=GenBank:WP_168236999.1;Name=WP_168236999.1;Ontology_term=GO:0008152,GO:0042279,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002881480.1;locus_tag=HGK48_RS10765;partial=true;product=ammonia-forming cytochrome c nitrite reductase subunit c552;protein_id=WP_168236999.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000411.1 1 761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000411.1 RefSeq region 1 761 . + . ID=NZ_JAATTN010000411.1:1..761;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000411.1 RefSeq gene 172 723 . - . ID=gene-HGK48_RS10770;Name=HGK48_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10770 NZ_JAATTN010000411.1 Protein Homology CDS 172 723 . - 0 ID=cds-WP_002849497.1;Parent=gene-HGK48_RS10770;Dbxref=GenBank:WP_002849497.1;Name=WP_002849497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015463.6;locus_tag=HGK48_RS10770;product=RICIN domain-containing protein;protein_id=WP_002849497.1;transl_table=11 ##sequence-region NZ_JAATTN010000412.1 1 759 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000412.1 RefSeq region 1 759 . + . ID=NZ_JAATTN010000412.1:1..759;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000412.1 RefSeq pseudogene 1 574 . - . ID=gene-HGK48_RS10775;Name=HGK48_RS10775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10775;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000412.1 Protein Homology CDS 1 574 . - 0 ID=cds-HGK48_RS10775;Parent=gene-HGK48_RS10775;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732298.1;locus_tag=HGK48_RS10775;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000413.1 1 753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000413.1 RefSeq region 1 753 . + . ID=NZ_JAATTN010000413.1:1..753;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000413.1 RefSeq pseudogene 239 753 . - . ID=gene-HGK48_RS10780;Name=HGK48_RS10780;end_range=753,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10780;partial=true;pseudo=true NZ_JAATTN010000413.1 Protein Homology CDS 239 753 . - 2 ID=cds-HGK48_RS10780;Parent=gene-HGK48_RS10780;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=753,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731752.1;locus_tag=HGK48_RS10780;partial=true;product=SLC13 family permease;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000414.1 1 753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000414.1 RefSeq region 1 753 . + . ID=NZ_JAATTN010000414.1:1..753;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000414.1 RefSeq gene 1 453 . - . ID=gene-HGK48_RS11115;Name=HGK48_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11115;partial=true;start_range=.,1 NZ_JAATTN010000414.1 Protein Homology CDS 1 453 . - 0 ID=cds-WP_206120340.1;Parent=gene-HGK48_RS11115;Dbxref=GenBank:WP_206120340.1;Name=WP_206120340.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=HGK48_RS11115;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_206120340.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000415.1 1 741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000415.1 RefSeq region 1 741 . + . ID=NZ_JAATTN010000415.1:1..741;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000415.1 RefSeq pseudogene 1 186 . + . ID=gene-HGK48_RS10795;Name=HGK48_RS10795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10795;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000415.1 Protein Homology CDS 1 186 . + 0 ID=cds-HGK48_RS10795;Parent=gene-HGK48_RS10795;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850271.1;locus_tag=HGK48_RS10795;partial=true;product=polysaccharide deacetylase family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000415.1 RefSeq gene 165 741 . - . ID=gene-HGK48_RS10800;Name=HGK48_RS10800;end_range=741,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10800;partial=true NZ_JAATTN010000415.1 Protein Homology CDS 165 741 . - 1 ID=cds-WP_168237001.1;Parent=gene-HGK48_RS10800;Dbxref=GenBank:WP_168237001.1;Name=WP_168237001.1;Ontology_term=GO:0016757;end_range=741,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732192.1;locus_tag=HGK48_RS10800;partial=true;product=glycosyltransferase family 9 protein;protein_id=WP_168237001.1;transl_table=11 ##sequence-region NZ_JAATTN010000416.1 1 735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000416.1 RefSeq region 1 735 . + . ID=NZ_JAATTN010000416.1:1..735;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000416.1 RefSeq gene 123 735 . - . ID=gene-HGK48_RS10805;Name=HGK48_RS10805;end_range=735,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10805;partial=true NZ_JAATTN010000416.1 Protein Homology CDS 123 735 . - 1 ID=cds-WP_457550924.1;Parent=gene-HGK48_RS10805;Dbxref=GenBank:WP_457550924.1;Name=WP_457550924.1;end_range=735,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037112.6;locus_tag=HGK48_RS10805;partial=true;product=putative barnase/colicin E5 family endoribonuclease;protein_id=WP_457550924.1;transl_table=11 ##sequence-region NZ_JAATTN010000417.1 1 726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000417.1 RefSeq region 1 726 . + . ID=NZ_JAATTN010000417.1:1..726;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000417.1 RefSeq gene 11 97 . + . ID=gene-HGK48_RS10810;Name=HGK48_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10810 NZ_JAATTN010000417.1 Protein Homology CDS 11 97 . + 0 ID=cds-WP_338153899.1;Parent=gene-HGK48_RS10810;Dbxref=GenBank:WP_338153899.1;Name=WP_338153899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.6;locus_tag=HGK48_RS10810;product=hypothetical protein;protein_id=WP_338153899.1;transl_table=11 NZ_JAATTN010000417.1 RefSeq gene 90 726 . + . ID=gene-HGK48_RS10815;Name=HGK48_RS10815;end_range=726,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10815;partial=true NZ_JAATTN010000417.1 Protein Homology CDS 90 726 . + 0 ID=cds-WP_338153898.1;Parent=gene-HGK48_RS10815;Dbxref=GenBank:WP_338153898.1;Name=WP_338153898.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;end_range=726,.;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015829002.1;locus_tag=HGK48_RS10815;partial=true;product=amino acid ABC transporter permease;protein_id=WP_338153898.1;transl_table=11 ##sequence-region NZ_JAATTN010000418.1 1 644 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000418.1 RefSeq region 1 644 . + . ID=NZ_JAATTN010000418.1:1..644;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000418.1 RefSeq pseudogene 1 644 . + . ID=gene-HGK48_RS10820;Name=HGK48_RS10820;end_range=644,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10820;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000418.1 Protein Homology CDS 1 644 . + 1 ID=cds-HGK48_RS10820;Parent=gene-HGK48_RS10820;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=644,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731837.1;locus_tag=HGK48_RS10820;partial=true;product=beta strand repeat-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000419.1 1 640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000419.1 RefSeq region 1 640 . + . ID=NZ_JAATTN010000419.1:1..640;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000419.1 RefSeq gene 1 611 . - . ID=gene-HGK48_RS10825;Name=HGK48_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10825;partial=true;start_range=.,1 NZ_JAATTN010000419.1 GeneMarkS-2+ CDS 1 611 . - 0 ID=cds-WP_168237004.1;Parent=gene-HGK48_RS10825;Dbxref=GenBank:WP_168237004.1;Name=WP_168237004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10825;partial=true;product=hypothetical protein;protein_id=WP_168237004.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000041.1 1 9488 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000041.1 RefSeq region 1 9488 . + . ID=NZ_JAATTN010000041.1:1..9488;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000041.1 RefSeq gene 123 1220 . + . ID=gene-HGK48_RS03385;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=HGK48_RS03385 NZ_JAATTN010000041.1 Protein Homology CDS 123 1220 . + 0 ID=cds-WP_002849032.1;Parent=gene-HGK48_RS03385;Dbxref=GenBank:WP_002849032.1;Name=WP_002849032.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849032.1;locus_tag=HGK48_RS03385;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_002849032.1;transl_table=11 NZ_JAATTN010000041.1 RefSeq gene 1302 2654 . + . ID=gene-HGK48_RS03390;Name=HGK48_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03390 NZ_JAATTN010000041.1 Protein Homology CDS 1302 2654 . + 0 ID=cds-WP_002849033.1;Parent=gene-HGK48_RS03390;Dbxref=GenBank:WP_002849033.1;Name=WP_002849033.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849033.1;locus_tag=HGK48_RS03390;product=FAD-dependent oxidoreductase;protein_id=WP_002849033.1;transl_table=11 NZ_JAATTN010000041.1 RefSeq gene 2614 3357 . + . ID=gene-HGK48_RS03395;Name=HGK48_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03395 NZ_JAATTN010000041.1 Protein Homology CDS 2614 3357 . + 0 ID=cds-WP_002849034.1;Parent=gene-HGK48_RS03395;Dbxref=GenBank:WP_002849034.1;Name=WP_002849034.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=HGK48_RS03395;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_002849034.1;transl_table=11 NZ_JAATTN010000041.1 RefSeq gene 3419 4864 . + . ID=gene-HGK48_RS03400;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=HGK48_RS03400 NZ_JAATTN010000041.1 Protein Homology CDS 3419 4864 . + 0 ID=cds-WP_024305375.1;Parent=gene-HGK48_RS03400;Dbxref=GenBank:WP_024305375.1;Name=WP_024305375.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014768746.1;locus_tag=HGK48_RS03400;product=pyruvate kinase;protein_id=WP_024305375.1;transl_table=11 NZ_JAATTN010000041.1 RefSeq gene 4880 6103 . + . ID=gene-HGK48_RS03405;Name=HGK48_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03405 NZ_JAATTN010000041.1 Protein Homology CDS 4880 6103 . + 0 ID=cds-WP_002849037.1;Parent=gene-HGK48_RS03405;Dbxref=GenBank:WP_002849037.1;Name=WP_002849037.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849037.1;locus_tag=HGK48_RS03405;product=M16 family metallopeptidase;protein_id=WP_002849037.1;transl_table=11 NZ_JAATTN010000041.1 RefSeq gene 6093 7901 . + . ID=gene-HGK48_RS03410;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=HGK48_RS03410 NZ_JAATTN010000041.1 Protein Homology CDS 6093 7901 . + 0 ID=cds-WP_010404052.1;Parent=gene-HGK48_RS03410;Dbxref=GenBank:WP_010404052.1;Name=WP_010404052.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;gene=recG;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010404052.1;locus_tag=HGK48_RS03410;product=ATP-dependent DNA helicase RecG;protein_id=WP_010404052.1;transl_table=11 NZ_JAATTN010000041.1 RefSeq gene 8160 9488 . + . ID=gene-HGK48_RS03415;Name=HGK48_RS03415;end_range=9488,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03415;partial=true NZ_JAATTN010000041.1 Protein Homology CDS 8160 9488 . + 0 ID=cds-WP_168236681.1;Parent=gene-HGK48_RS03415;Dbxref=GenBank:WP_168236681.1;Name=WP_168236681.1;Ontology_term=GO:0009073,GO:0009423,GO:0003849;end_range=9488,.;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849039.1;locus_tag=HGK48_RS03415;partial=true;product=class II 3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_168236681.1;transl_table=11 ##sequence-region NZ_JAATTN010000420.1 1 714 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000420.1 RefSeq region 1 714 . + . ID=NZ_JAATTN010000420.1:1..714;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000420.1 RefSeq gene 147 311 . + . ID=gene-HGK48_RS10830;Name=HGK48_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10830 NZ_JAATTN010000420.1 Protein Homology CDS 147 311 . + 0 ID=cds-WP_010401022.1;Parent=gene-HGK48_RS10830;Dbxref=GenBank:WP_010401022.1;Name=WP_010401022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848751.1;locus_tag=HGK48_RS10830;product=hypothetical protein;protein_id=WP_010401022.1;transl_table=11 NZ_JAATTN010000420.1 RefSeq gene 313 714 . + . ID=gene-HGK48_RS10835;Name=HGK48_RS10835;end_range=714,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10835;partial=true NZ_JAATTN010000420.1 GeneMarkS-2+ CDS 313 714 . + 0 ID=cds-WP_168237005.1;Parent=gene-HGK48_RS10835;Dbxref=GenBank:WP_168237005.1;Name=WP_168237005.1;end_range=714,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10835;partial=true;product=hypothetical protein;protein_id=WP_168237005.1;transl_table=11 ##sequence-region NZ_JAATTN010000421.1 1 713 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000421.1 RefSeq region 1 713 . + . ID=NZ_JAATTN010000421.1:1..713;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000421.1 RefSeq gene 1 182 . + . ID=gene-HGK48_RS10840;Name=HGK48_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10840;partial=true;start_range=.,1 NZ_JAATTN010000421.1 Protein Homology CDS 1 182 . + 2 ID=cds-WP_277346458.1;Parent=gene-HGK48_RS10840;Dbxref=GenBank:WP_277346458.1;Name=WP_277346458.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850419.1;locus_tag=HGK48_RS10840;partial=true;product=uroporphyrinogen decarboxylase family protein;protein_id=WP_277346458.1;start_range=.,1;transl_table=11 NZ_JAATTN010000421.1 RefSeq gene 179 713 . + . ID=gene-HGK48_RS10845;Name=HGK48_RS10845;end_range=713,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10845;partial=true NZ_JAATTN010000421.1 Protein Homology CDS 179 713 . + 0 ID=cds-WP_168237006.1;Parent=gene-HGK48_RS10845;Dbxref=GenBank:WP_168237006.1;Name=WP_168237006.1;Ontology_term=GO:0003824,GO:0051539;end_range=713,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732211.1;locus_tag=HGK48_RS10845;partial=true;product=radical SAM protein;protein_id=WP_168237006.1;transl_table=11 ##sequence-region NZ_JAATTN010000422.1 1 685 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000422.1 RefSeq region 1 685 . + . ID=NZ_JAATTN010000422.1:1..685;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000422.1 RefSeq gene 1 685 . + . ID=gene-HGK48_RS10850;Name=HGK48_RS10850;end_range=685,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10850;partial=true;start_range=.,1 NZ_JAATTN010000422.1 Protein Homology CDS 1 685 . + 1 ID=cds-WP_168237007.1;Parent=gene-HGK48_RS10850;Dbxref=GenBank:WP_168237007.1;Name=WP_168237007.1;Ontology_term=GO:0055085,GO:0016020;end_range=685,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849178.1;locus_tag=HGK48_RS10850;partial=true;product=AEC family transporter;protein_id=WP_168237007.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000423.1 1 678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000423.1 RefSeq region 1 678 . + . ID=NZ_JAATTN010000423.1:1..678;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000423.1 RefSeq gene 75 278 . - . ID=gene-HGK48_RS10855;Name=HGK48_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10855 NZ_JAATTN010000423.1 Protein Homology CDS 75 278 . - 0 ID=cds-WP_168237008.1;Parent=gene-HGK48_RS10855;Dbxref=GenBank:WP_168237008.1;Name=WP_168237008.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020993.6;locus_tag=HGK48_RS10855;product=DUF2018 family protein;protein_id=WP_168237008.1;transl_table=11 NZ_JAATTN010000423.1 RefSeq gene 345 678 . - . ID=gene-HGK48_RS10860;Name=HGK48_RS10860;end_range=678,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10860;partial=true NZ_JAATTN010000423.1 Protein Homology CDS 345 678 . - 1 ID=cds-WP_277346459.1;Parent=gene-HGK48_RS10860;Dbxref=GenBank:WP_277346459.1;Name=WP_277346459.1;end_range=678,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731914.1;locus_tag=HGK48_RS10860;partial=true;product=DNA translocase FtsK;protein_id=WP_277346459.1;transl_table=11 ##sequence-region NZ_JAATTN010000424.1 1 668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000424.1 RefSeq region 1 668 . + . ID=NZ_JAATTN010000424.1:1..668;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000424.1 RefSeq pseudogene 1 668 . + . ID=gene-HGK48_RS10865;Name=HGK48_RS10865;end_range=668,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10865;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000424.1 Protein Homology CDS 1 668 . + 2 ID=cds-HGK48_RS10865;Parent=gene-HGK48_RS10865;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731792.1;locus_tag=HGK48_RS10865;partial=true;product=PAS domain-containing sensor histidine kinase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000425.1 1 665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000425.1 RefSeq region 1 665 . + . ID=NZ_JAATTN010000425.1:1..665;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000425.1 RefSeq gene 317 661 . + . ID=gene-HGK48_RS10870;Name=HGK48_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10870 NZ_JAATTN010000425.1 GeneMarkS-2+ CDS 317 661 . + 0 ID=cds-WP_065839581.1;Parent=gene-HGK48_RS10870;Dbxref=GenBank:WP_065839581.1;Name=WP_065839581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10870;product=hypothetical protein;protein_id=WP_065839581.1;transl_table=11 ##sequence-region NZ_JAATTN010000426.1 1 659 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000426.1 RefSeq region 1 659 . + . ID=NZ_JAATTN010000426.1:1..659;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000426.1 RefSeq gene 1 659 . + . ID=gene-HGK48_RS10875;Name=HGK48_RS10875;end_range=659,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10875;partial=true;start_range=.,1 NZ_JAATTN010000426.1 Protein Homology CDS 1 659 . + 2 ID=cds-WP_240944852.1;Parent=gene-HGK48_RS10875;Dbxref=GenBank:WP_240944852.1;Name=WP_240944852.1;end_range=659,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010403161.1;locus_tag=HGK48_RS10875;partial=true;product=dihydropteroate synthase;protein_id=WP_240944852.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000427.1 1 657 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000427.1 RefSeq region 1 657 . + . ID=NZ_JAATTN010000427.1:1..657;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000427.1 RefSeq gene 1 540 . + . ID=gene-HGK48_RS10880;Name=HGK48_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10880;partial=true;start_range=.,1 NZ_JAATTN010000427.1 Protein Homology CDS 1 540 . + 0 ID=cds-WP_168237010.1;Parent=gene-HGK48_RS10880;Dbxref=GenBank:WP_168237010.1;Name=WP_168237010.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002871902.1;locus_tag=HGK48_RS10880;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_168237010.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000428.1 1 651 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000428.1 RefSeq region 1 651 . + . ID=NZ_JAATTN010000428.1:1..651;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000428.1 RefSeq gene 91 651 . + . ID=gene-HGK48_RS10885;Name=HGK48_RS10885;end_range=651,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10885;partial=true NZ_JAATTN010000428.1 Protein Homology CDS 91 651 . + 0 ID=cds-WP_338153900.1;Parent=gene-HGK48_RS10885;Dbxref=GenBank:WP_338153900.1;Name=WP_338153900.1;Ontology_term=GO:0016787;end_range=651,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732098.1;locus_tag=HGK48_RS10885;partial=true;product=metallophosphoesterase;protein_id=WP_338153900.1;transl_table=11 ##sequence-region NZ_JAATTN010000429.1 1 649 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000429.1 RefSeq region 1 649 . + . ID=NZ_JAATTN010000429.1:1..649;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000429.1 RefSeq pseudogene 1 649 . - . ID=gene-HGK48_RS11340;Name=HGK48_RS11340;end_range=649,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11340;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000429.1 Protein Homology CDS 1 649 . - 0 ID=cds-HGK48_RS11340;Parent=gene-HGK48_RS11340;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=649,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731831.1;locus_tag=HGK48_RS11340;partial=true;product=beta strand repeat-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000042.1 1 9271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000042.1 RefSeq region 1 9271 . + . ID=NZ_JAATTN010000042.1:1..9271;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000042.1 RefSeq gene 1 450 . - . ID=gene-HGK48_RS03420;Name=HGK48_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03420;partial=true;start_range=.,1 NZ_JAATTN010000042.1 Protein Homology CDS 1 450 . - 0 ID=cds-WP_168236682.1;Parent=gene-HGK48_RS03420;Dbxref=GenBank:WP_168236682.1;Name=WP_168236682.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991695.1;locus_tag=HGK48_RS03420;partial=true;product=metal ABC transporter permease;protein_id=WP_168236682.1;start_range=.,1;transl_table=11 NZ_JAATTN010000042.1 RefSeq gene 447 1202 . - . ID=gene-HGK48_RS03425;Name=HGK48_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03425 NZ_JAATTN010000042.1 Protein Homology CDS 447 1202 . - 0 ID=cds-WP_011732324.1;Parent=gene-HGK48_RS03425;Dbxref=GenBank:WP_011732324.1;Name=WP_011732324.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732324.1;locus_tag=HGK48_RS03425;product=metal ABC transporter ATP-binding protein;protein_id=WP_011732324.1;transl_table=11 NZ_JAATTN010000042.1 RefSeq gene 1199 2740 . - . ID=gene-HGK48_RS03430;Name=HGK48_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03430 NZ_JAATTN010000042.1 Protein Homology CDS 1199 2740 . - 0 ID=cds-WP_011732325.1;Parent=gene-HGK48_RS03430;Dbxref=GenBank:WP_011732325.1;Name=WP_011732325.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: protein motif:HMM:NF015763.6;locus_tag=HGK48_RS03430;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_011732325.1;transl_table=11 NZ_JAATTN010000042.1 RefSeq gene 2737 4146 . - . ID=gene-HGK48_RS03435;Name=HGK48_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03435 NZ_JAATTN010000042.1 Protein Homology CDS 2737 4146 . - 0 ID=cds-WP_002850828.1;Parent=gene-HGK48_RS03435;Dbxref=GenBank:WP_002850828.1;Name=WP_002850828.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF013465.6;locus_tag=HGK48_RS03435;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=WP_002850828.1;transl_table=11 NZ_JAATTN010000042.1 RefSeq gene 4332 4682 . + . ID=gene-HGK48_RS03440;Name=HGK48_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03440 NZ_JAATTN010000042.1 Protein Homology CDS 4332 4682 . + 0 ID=cds-WP_002850829.1;Parent=gene-HGK48_RS03440;Dbxref=GenBank:WP_002850829.1;Name=WP_002850829.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850829.1;locus_tag=HGK48_RS03440;product=Fur family transcriptional regulator;protein_id=WP_002850829.1;transl_table=11 NZ_JAATTN010000042.1 RefSeq gene 4848 5702 . + . ID=gene-HGK48_RS03445;Name=HGK48_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03445 NZ_JAATTN010000042.1 Protein Homology CDS 4848 5702 . + 0 ID=cds-WP_065439533.1;Parent=gene-HGK48_RS03445;Dbxref=GenBank:WP_065439533.1;Name=WP_065439533.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: protein motif:HMM:NF015131.6;locus_tag=HGK48_RS03445;product=cytochrome-c peroxidase;protein_id=WP_065439533.1;transl_table=11 NZ_JAATTN010000042.1 RefSeq gene 5695 8130 . + . ID=gene-HGK48_RS03450;Name=HGK48_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03450 NZ_JAATTN010000042.1 Protein Homology CDS 5695 8130 . + 0 ID=cds-WP_167497347.1;Parent=gene-HGK48_RS03450;Dbxref=GenBank:WP_167497347.1;Name=WP_167497347.1;Ontology_term=GO:0000160,GO:0007165,GO:0005515,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=protein binding|0005515||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012772.6;locus_tag=HGK48_RS03450;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_167497347.1;transl_table=11 NZ_JAATTN010000042.1 RefSeq gene 8143 8811 . + . ID=gene-HGK48_RS03455;Name=HGK48_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03455 NZ_JAATTN010000042.1 Protein Homology CDS 8143 8811 . + 0 ID=cds-WP_002850835.1;Parent=gene-HGK48_RS03455;Dbxref=GenBank:WP_002850835.1;Name=WP_002850835.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850835.1;locus_tag=HGK48_RS03455;product=carbonic anhydrase;protein_id=WP_002850835.1;transl_table=11 NZ_JAATTN010000042.1 RefSeq pseudogene 8774 9271 . + . ID=gene-HGK48_RS03460;Name=HGK48_RS03460;end_range=9271,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS03460;partial=true;pseudo=true NZ_JAATTN010000042.1 Protein Homology CDS 8774 9271 . + 0 ID=cds-HGK48_RS03460;Parent=gene-HGK48_RS03460;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=9271,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850838.1;locus_tag=HGK48_RS03460;partial=true;product=mechanosensitive ion channel family protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000430.1 1 646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000430.1 RefSeq region 1 646 . + . ID=NZ_JAATTN010000430.1:1..646;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000430.1 RefSeq gene 1 646 . + . ID=gene-HGK48_RS10895;Name=HGK48_RS10895;end_range=646,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10895;partial=true;start_range=.,1 NZ_JAATTN010000430.1 Protein Homology CDS 1 646 . + 1 ID=cds-WP_168237011.1;Parent=gene-HGK48_RS10895;Dbxref=GenBank:WP_168237011.1;Name=WP_168237011.1;Ontology_term=GO:0008654,GO:0004609;end_range=646,.;gbkey=CDS;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732099.1;locus_tag=HGK48_RS10895;partial=true;product=phosphatidylserine decarboxylase;protein_id=WP_168237011.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000431.1 1 580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000431.1 RefSeq region 1 580 . + . ID=NZ_JAATTN010000431.1:1..580;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000431.1 RefSeq gene 1 580 . - . ID=gene-HGK48_RS10900;Name=HGK48_RS10900;end_range=580,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10900;partial=true;start_range=.,1 NZ_JAATTN010000431.1 GeneMarkS-2+ CDS 1 580 . - 0 ID=cds-WP_168237012.1;Parent=gene-HGK48_RS10900;Dbxref=GenBank:WP_168237012.1;Name=WP_168237012.1;end_range=580,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10900;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_168237012.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000432.1 1 634 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000432.1 RefSeq region 1 634 . + . ID=NZ_JAATTN010000432.1:1..634;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000432.1 RefSeq pseudogene 1 331 . + . ID=gene-HGK48_RS10905;Name=HGK48_RS10905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10905;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000432.1 Protein Homology CDS 1 331 . + 1 ID=cds-HGK48_RS10905;Parent=gene-HGK48_RS10905;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732108.1;locus_tag=HGK48_RS10905;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000432.1 RefSeq gene 312 634 . + . ID=gene-HGK48_RS10910;Name=HGK48_RS10910;end_range=634,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10910;partial=true NZ_JAATTN010000432.1 GeneMarkS-2+ CDS 312 634 . + 0 ID=cds-WP_168237014.1;Parent=gene-HGK48_RS10910;Dbxref=GenBank:WP_168237014.1;Name=WP_168237014.1;end_range=634,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10910;partial=true;product=hypothetical protein;protein_id=WP_168237014.1;transl_table=11 ##sequence-region NZ_JAATTN010000433.1 1 626 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000433.1 RefSeq region 1 626 . + . ID=NZ_JAATTN010000433.1:1..626;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000433.1 RefSeq gene 271 626 . - . ID=gene-HGK48_RS10915;Name=HGK48_RS10915;end_range=626,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10915;partial=true NZ_JAATTN010000433.1 GeneMarkS-2+ CDS 271 626 . - 2 ID=cds-WP_168237015.1;Parent=gene-HGK48_RS10915;Dbxref=GenBank:WP_168237015.1;Name=WP_168237015.1;end_range=626,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10915;partial=true;product=hypothetical protein;protein_id=WP_168237015.1;transl_table=11 ##sequence-region NZ_JAATTN010000434.1 1 470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000434.1 RefSeq region 1 470 . + . ID=NZ_JAATTN010000434.1:1..470;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000434.1 RefSeq gene 1 470 . + . ID=gene-HGK48_RS10920;Name=HGK48_RS10920;end_range=470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10920;partial=true;start_range=.,1 NZ_JAATTN010000434.1 Protein Homology CDS 1 470 . + 1 ID=cds-WP_168237016.1;Parent=gene-HGK48_RS10920;Dbxref=GenBank:WP_168237016.1;Name=WP_168237016.1;end_range=470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849391.1;locus_tag=HGK48_RS10920;partial=true;product=DUF455 family protein;protein_id=WP_168237016.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000435.1 1 616 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000435.1 RefSeq region 1 616 . + . ID=NZ_JAATTN010000435.1:1..616;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000435.1 RefSeq gene 182 616 . + . ID=gene-HGK48_RS10925;Name=HGK48_RS10925;end_range=616,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10925;partial=true NZ_JAATTN010000435.1 Protein Homology CDS 182 616 . + 0 ID=cds-WP_168237017.1;Parent=gene-HGK48_RS10925;Dbxref=GenBank:WP_168237017.1;Name=WP_168237017.1;Ontology_term=GO:0003677;end_range=616,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=HGK48_RS10925;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_168237017.1;transl_table=11 ##sequence-region NZ_JAATTN010000436.1 1 615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000436.1 RefSeq region 1 615 . + . ID=NZ_JAATTN010000436.1:1..615;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000436.1 RefSeq gene 51 615 . + . ID=gene-HGK48_RS10930;Name=HGK48_RS10930;end_range=615,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10930;partial=true NZ_JAATTN010000436.1 GeneMarkS-2+ CDS 51 615 . + 0 ID=cds-WP_168237018.1;Parent=gene-HGK48_RS10930;Dbxref=GenBank:WP_168237018.1;Name=WP_168237018.1;end_range=615,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10930;partial=true;product=hypothetical protein;protein_id=WP_168237018.1;transl_table=11 ##sequence-region NZ_JAATTN010000437.1 1 599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000437.1 RefSeq region 1 599 . + . ID=NZ_JAATTN010000437.1:1..599;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000437.1 RefSeq gene 234 434 . - . ID=gene-HGK48_RS10935;Name=HGK48_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10935 NZ_JAATTN010000437.1 GeneMarkS-2+ CDS 234 434 . - 0 ID=cds-WP_035170875.1;Parent=gene-HGK48_RS10935;Dbxref=GenBank:WP_035170875.1;Name=WP_035170875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10935;product=MerR family transcriptional regulator;protein_id=WP_035170875.1;transl_table=11 ##sequence-region NZ_JAATTN010000438.1 1 598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000438.1 RefSeq region 1 598 . + . ID=NZ_JAATTN010000438.1:1..598;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000438.1 RefSeq gene 1 598 . - . ID=gene-HGK48_RS10940;Name=HGK48_RS10940;end_range=598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10940;partial=true;start_range=.,1 NZ_JAATTN010000438.1 Protein Homology CDS 1 598 . - 1 ID=cds-WP_168237019.1;Parent=gene-HGK48_RS10940;Dbxref=GenBank:WP_168237019.1;Name=WP_168237019.1;end_range=598,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849999.1;locus_tag=HGK48_RS10940;partial=true;product=DUF234 domain-containing protein;protein_id=WP_168237019.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000439.1 1 596 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000439.1 RefSeq region 1 596 . + . ID=NZ_JAATTN010000439.1:1..596;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000439.1 RefSeq pseudogene 1 596 . + . ID=gene-HGK48_RS10945;Name=HGK48_RS10945;end_range=596,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10945;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000439.1 GeneMarkS-2+ CDS 1 596 . + 1 ID=cds-HGK48_RS10945;Parent=gene-HGK48_RS10945;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=596,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10945;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000043.1 1 8893 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000043.1 RefSeq region 1 8893 . + . ID=NZ_JAATTN010000043.1:1..8893;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000043.1 RefSeq gene 158 1444 . - . ID=gene-HGK48_RS03470;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=HGK48_RS03470 NZ_JAATTN010000043.1 Protein Homology CDS 158 1444 . - 0 ID=cds-WP_002848860.1;Parent=gene-HGK48_RS03470;Dbxref=GenBank:WP_002848860.1;Name=WP_002848860.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848860.1;locus_tag=HGK48_RS03470;product=histidinol dehydrogenase;protein_id=WP_002848860.1;transl_table=11 NZ_JAATTN010000043.1 RefSeq gene 1468 2340 . - . ID=gene-HGK48_RS03475;Name=HGK48_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03475 NZ_JAATTN010000043.1 Protein Homology CDS 1468 2340 . - 0 ID=cds-WP_002848859.1;Parent=gene-HGK48_RS03475;Dbxref=GenBank:WP_002848859.1;Name=WP_002848859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848859.1;locus_tag=HGK48_RS03475;product=1-aminocyclopropane-1-carboxylate deaminase;protein_id=WP_002848859.1;transl_table=11 NZ_JAATTN010000043.1 RefSeq gene 2330 3334 . - . ID=gene-HGK48_RS03480;Name=HGK48_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03480 NZ_JAATTN010000043.1 Protein Homology CDS 2330 3334 . - 0 ID=cds-WP_002848858.1;Parent=gene-HGK48_RS03480;Dbxref=GenBank:WP_002848858.1;Name=WP_002848858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848858.1;locus_tag=HGK48_RS03480;product=OmpA family protein;protein_id=WP_002848858.1;transl_table=11 NZ_JAATTN010000043.1 RefSeq gene 3321 4646 . - . ID=gene-HGK48_RS03485;Name=HGK48_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03485 NZ_JAATTN010000043.1 Protein Homology CDS 3321 4646 . - 0 ID=cds-WP_011731851.1;Parent=gene-HGK48_RS03485;Dbxref=GenBank:WP_011731851.1;Name=WP_011731851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848857.1;locus_tag=HGK48_RS03485;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_011731851.1;transl_table=11 NZ_JAATTN010000043.1 RefSeq gene 4735 5799 . - . ID=gene-HGK48_RS03490;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=HGK48_RS03490 NZ_JAATTN010000043.1 Protein Homology CDS 4735 5799 . - 0 ID=cds-WP_002848856.1;Parent=gene-HGK48_RS03490;Dbxref=GenBank:WP_002848856.1;Name=WP_002848856.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344027.1;locus_tag=HGK48_RS03490;product=class II fructose-bisphosphate aldolase;protein_id=WP_002848856.1;transl_table=11 NZ_JAATTN010000043.1 RefSeq gene 5809 6618 . - . ID=gene-HGK48_RS03495;Name=HGK48_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03495 NZ_JAATTN010000043.1 Protein Homology CDS 5809 6618 . - 0 ID=cds-WP_002848855.1;Parent=gene-HGK48_RS03495;Dbxref=GenBank:WP_002848855.1;Name=WP_002848855.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002777551.1;locus_tag=HGK48_RS03495;product=peptidylprolyl isomerase;protein_id=WP_002848855.1;transl_table=11 NZ_JAATTN010000043.1 RefSeq gene 6717 7349 . + . ID=gene-HGK48_RS03500;Name=HGK48_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03500 NZ_JAATTN010000043.1 Protein Homology CDS 6717 7349 . + 0 ID=cds-WP_002848854.1;Parent=gene-HGK48_RS03500;Dbxref=GenBank:WP_002848854.1;Name=WP_002848854.1;Ontology_term=GO:0006284,GO:0016798,GO:0051539;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848854.1;locus_tag=HGK48_RS03500;product=endonuclease III domain-containing protein;protein_id=WP_002848854.1;transl_table=11 NZ_JAATTN010000043.1 RefSeq gene 7342 8643 . - . ID=gene-HGK48_RS03505;Name=HGK48_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03505 NZ_JAATTN010000043.1 Protein Homology CDS 7342 8643 . - 0 ID=cds-WP_011731850.1;Parent=gene-HGK48_RS03505;Dbxref=GenBank:WP_011731850.1;Name=WP_011731850.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731850.1;locus_tag=HGK48_RS03505;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_011731850.1;transl_table=11 ##sequence-region NZ_JAATTN010000440.1 1 594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000440.1 RefSeq region 1 594 . + . ID=NZ_JAATTN010000440.1:1..594;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000440.1 RefSeq pseudogene 116 594 . + . ID=gene-HGK48_RS10950;Name=HGK48_RS10950;end_range=594,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10950;partial=true;pseudo=true NZ_JAATTN010000440.1 GeneMarkS-2+ CDS 116 594 . + 0 ID=cds-HGK48_RS10950;Parent=gene-HGK48_RS10950;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=594,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10950;partial=true;product=PDC sensor domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000441.1 1 594 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000441.1 RefSeq region 1 594 . + . ID=NZ_JAATTN010000441.1:1..594;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000441.1 RefSeq gene 127 594 . - . ID=gene-HGK48_RS10955;Name=hemH;end_range=594,.;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=HGK48_RS10955;partial=true NZ_JAATTN010000441.1 Protein Homology CDS 127 594 . - 0 ID=cds-WP_168237021.1;Parent=gene-HGK48_RS10955;Dbxref=GenBank:WP_168237021.1;Name=WP_168237021.1;Ontology_term=GO:0006779,GO:0004325;end_range=594,.;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849117.1;locus_tag=HGK48_RS10955;partial=true;product=ferrochelatase;protein_id=WP_168237021.1;transl_table=11 ##sequence-region NZ_JAATTN010000442.1 1 588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000442.1 RefSeq region 1 588 . + . ID=NZ_JAATTN010000442.1:1..588;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000442.1 RefSeq gene 1 396 . - . ID=gene-HGK48_RS10960;Name=HGK48_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10960;partial=true;start_range=.,1 NZ_JAATTN010000442.1 Protein Homology CDS 1 396 . - 0 ID=cds-WP_168237022.1;Parent=gene-HGK48_RS10960;Dbxref=GenBank:WP_168237022.1;Name=WP_168237022.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=HGK48_RS10960;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_168237022.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000443.1 1 587 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000443.1 RefSeq region 1 587 . + . ID=NZ_JAATTN010000443.1:1..587;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000443.1 RefSeq gene 1 587 . - . ID=gene-HGK48_RS10965;Name=HGK48_RS10965;end_range=587,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10965;partial=true;start_range=.,1 NZ_JAATTN010000443.1 GeneMarkS-2+ CDS 1 587 . - 0 ID=cds-WP_168237023.1;Parent=gene-HGK48_RS10965;Dbxref=GenBank:WP_168237023.1;Name=WP_168237023.1;end_range=587,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10965;partial=true;product=hypothetical protein;protein_id=WP_168237023.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000444.1 1 585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000444.1 RefSeq region 1 585 . + . ID=NZ_JAATTN010000444.1:1..585;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000444.1 RefSeq pseudogene 33 585 . + . ID=gene-HGK48_RS10970;Name=HGK48_RS10970;end_range=585,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10970;partial=true;pseudo=true NZ_JAATTN010000444.1 Protein Homology CDS 33 585 . + 0 ID=cds-HGK48_RS10970;Parent=gene-HGK48_RS10970;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=585,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731830.1;locus_tag=HGK48_RS10970;partial=true;product=beta strand repeat-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000445.1 1 585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000445.1 RefSeq region 1 585 . + . ID=NZ_JAATTN010000445.1:1..585;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000445.1 RefSeq gene 210 455 . + . ID=gene-HGK48_RS10975;Name=HGK48_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10975 NZ_JAATTN010000445.1 Protein Homology CDS 210 455 . + 0 ID=cds-WP_024305159.1;Parent=gene-HGK48_RS10975;Dbxref=GenBank:WP_024305159.1;Name=WP_024305159.1;Ontology_term=GO:0006397,GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;go_process=mRNA processing|0006397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004319321.1;locus_tag=HGK48_RS10975;product=RNA recognition motif domain-containing protein;protein_id=WP_024305159.1;transl_table=11 ##sequence-region NZ_JAATTN010000446.1 1 578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000446.1 RefSeq region 1 578 . + . ID=NZ_JAATTN010000446.1:1..578;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000446.1 RefSeq gene 1 470 . + . ID=gene-HGK48_RS10980;Name=HGK48_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS10980;partial=true;start_range=.,1 NZ_JAATTN010000446.1 Protein Homology CDS 1 470 . + 2 ID=cds-WP_168237024.1;Parent=gene-HGK48_RS10980;Dbxref=GenBank:WP_168237024.1;Name=WP_168237024.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014567.6;locus_tag=HGK48_RS10980;partial=true;product=sensor histidine kinase;protein_id=WP_168237024.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000447.1 1 564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000447.1 RefSeq region 1 564 . + . ID=NZ_JAATTN010000447.1:1..564;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000447.1 RefSeq gene 1 524 . - . ID=gene-HGK48_RS10985;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=HGK48_RS10985;partial=true;start_range=.,1 NZ_JAATTN010000447.1 Protein Homology CDS 1 524 . - 0 ID=cds-WP_168237025.1;Parent=gene-HGK48_RS10985;Dbxref=GenBank:WP_168237025.1;Name=WP_168237025.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849600.1;locus_tag=HGK48_RS10985;partial=true;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_168237025.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000448.1 1 560 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000448.1 RefSeq region 1 560 . + . ID=NZ_JAATTN010000448.1:1..560;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000448.1 RefSeq pseudogene 1 560 . - . ID=gene-HGK48_RS10990;Name=HGK48_RS10990;end_range=560,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS10990;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000448.1 GeneMarkS-2+ CDS 1 560 . - 2 ID=cds-HGK48_RS10990;Parent=gene-HGK48_RS10990;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=560,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS10990;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000449.1 1 557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000449.1 RefSeq region 1 557 . + . ID=NZ_JAATTN010000449.1:1..557;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000449.1 RefSeq gene 1 557 . - . ID=gene-HGK48_RS10995;Name=HGK48_RS10995;end_range=557,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=HGK48_RS10995;partial=true;start_range=.,1 NZ_JAATTN010000449.1 cmsearch rRNA 1 557 . - . ID=rna-HGK48_RS10995;Parent=gene-HGK48_RS10995;Dbxref=RFAM:RF00177;end_range=557,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS10995;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JAATTN010000449.1 cmsearch exon 1 557 . - . ID=exon-HGK48_RS10995-1;Parent=rna-HGK48_RS10995;Dbxref=RFAM:RF00177;end_range=557,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS10995;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAATTN010000044.1 1 8892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000044.1 RefSeq region 1 8892 . + . ID=NZ_JAATTN010000044.1:1..8892;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000044.1 RefSeq gene 82 1170 . + . ID=gene-HGK48_RS03510;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=HGK48_RS03510 NZ_JAATTN010000044.1 Protein Homology CDS 82 1170 . + 0 ID=cds-WP_002849758.1;Parent=gene-HGK48_RS03510;Dbxref=GenBank:WP_002849758.1;Name=WP_002849758.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849758.1;locus_tag=HGK48_RS03510;product=molecular chaperone DnaJ;protein_id=WP_002849758.1;transl_table=11 NZ_JAATTN010000044.1 RefSeq gene 1202 1462 . - . ID=gene-HGK48_RS03515;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=HGK48_RS03515 NZ_JAATTN010000044.1 Protein Homology CDS 1202 1462 . - 0 ID=cds-WP_002849757.1;Parent=gene-HGK48_RS03515;Dbxref=GenBank:WP_002849757.1;Name=WP_002849757.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344465.1;locus_tag=HGK48_RS03515;product=30S ribosomal protein S18;protein_id=WP_002849757.1;transl_table=11 NZ_JAATTN010000044.1 RefSeq gene 1475 2104 . - . ID=gene-HGK48_RS03520;Name=HGK48_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03520 NZ_JAATTN010000044.1 Protein Homology CDS 1475 2104 . - 0 ID=cds-WP_002849756.1;Parent=gene-HGK48_RS03520;Dbxref=GenBank:WP_002849756.1;Name=WP_002849756.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849756.1;locus_tag=HGK48_RS03520;product=single-stranded DNA-binding protein;protein_id=WP_002849756.1;transl_table=11 NZ_JAATTN010000044.1 RefSeq gene 2126 2512 . - . ID=gene-HGK48_RS03525;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=HGK48_RS03525 NZ_JAATTN010000044.1 Protein Homology CDS 2126 2512 . - 0 ID=cds-WP_002849755.1;Parent=gene-HGK48_RS03525;Dbxref=GenBank:WP_002849755.1;Name=WP_002849755.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849755.1;locus_tag=HGK48_RS03525;product=30S ribosomal protein S6;protein_id=WP_002849755.1;transl_table=11 NZ_JAATTN010000044.1 RefSeq gene 2605 3597 . - . ID=gene-HGK48_RS03530;Name=HGK48_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03530 NZ_JAATTN010000044.1 Protein Homology CDS 2605 3597 . - 0 ID=cds-WP_024305204.1;Parent=gene-HGK48_RS03530;Dbxref=GenBank:WP_024305204.1;Name=WP_024305204.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002946423.1;locus_tag=HGK48_RS03530;product=DNA polymerase III subunit delta;protein_id=WP_024305204.1;transl_table=11 NZ_JAATTN010000044.1 RefSeq gene 3590 5518 . - . ID=gene-HGK48_RS03535;Name=HGK48_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03535 NZ_JAATTN010000044.1 Protein Homology CDS 3590 5518 . - 0 ID=cds-WP_168236683.1;Parent=gene-HGK48_RS03535;Dbxref=GenBank:WP_168236683.1;Name=WP_168236683.1;Ontology_term=GO:0003723,GO:0004540;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849749.1;locus_tag=HGK48_RS03535;product=RNB domain-containing ribonuclease;protein_id=WP_168236683.1;transl_table=11 NZ_JAATTN010000044.1 RefSeq gene 5515 6327 . - . ID=gene-HGK48_RS03540;Name=HGK48_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03540 NZ_JAATTN010000044.1 Protein Homology CDS 5515 6327 . - 0 ID=cds-WP_002849747.1;Parent=gene-HGK48_RS03540;Dbxref=GenBank:WP_002849747.1;Name=WP_002849747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732092.1;locus_tag=HGK48_RS03540;product=HDOD domain-containing protein;protein_id=WP_002849747.1;transl_table=11 NZ_JAATTN010000044.1 RefSeq gene 6474 7496 . + . ID=gene-HGK48_RS03545;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=HGK48_RS03545 NZ_JAATTN010000044.1 Protein Homology CDS 6474 7496 . + 0 ID=cds-WP_002849745.1;Parent=gene-HGK48_RS03545;Dbxref=GenBank:WP_002849745.1;Name=WP_002849745.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344061.1;locus_tag=HGK48_RS03545;product=ketol-acid reductoisomerase;protein_id=WP_002849745.1;transl_table=11 NZ_JAATTN010000044.1 RefSeq gene 7575 8660 . + . ID=gene-HGK48_RS03550;Name=HGK48_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03550 NZ_JAATTN010000044.1 Protein Homology CDS 7575 8660 . + 0 ID=cds-WP_134864086.1;Parent=gene-HGK48_RS03550;Dbxref=GenBank:WP_134864086.1;Name=WP_134864086.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF016623.6;locus_tag=HGK48_RS03550;product=divergent polysaccharide deacetylase family protein;protein_id=WP_134864086.1;transl_table=11 NZ_JAATTN010000044.1 RefSeq gene 8644 8892 . + . ID=gene-HGK48_RS03555;Name=HGK48_RS03555;end_range=8892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03555;partial=true NZ_JAATTN010000044.1 Protein Homology CDS 8644 8892 . + 0 ID=cds-WP_206120292.1;Parent=gene-HGK48_RS03555;Dbxref=GenBank:WP_206120292.1;Name=WP_206120292.1;Ontology_term=GO:0009294;end_range=8892,.;gbkey=CDS;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849743.1;locus_tag=HGK48_RS03555;partial=true;product=DNA-processing protein DprA;protein_id=WP_206120292.1;transl_table=11 ##sequence-region NZ_JAATTN010000450.1 1 470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000450.1 RefSeq region 1 470 . + . ID=NZ_JAATTN010000450.1:1..470;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000450.1 RefSeq gene 1 220 . + . ID=gene-HGK48_RS11000;Name=HGK48_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11000;partial=true;start_range=.,1 NZ_JAATTN010000450.1 Protein Homology CDS 1 220 . + 1 ID=cds-WP_206120343.1;Parent=gene-HGK48_RS11000;Dbxref=GenBank:WP_206120343.1;Name=WP_206120343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018136367.1;locus_tag=HGK48_RS11000;partial=true;product=type II secretion system F family protein;protein_id=WP_206120343.1;start_range=.,1;transl_table=11 NZ_JAATTN010000450.1 RefSeq gene 284 470 . + . ID=gene-HGK48_RS11005;Name=HGK48_RS11005;end_range=470,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11005;partial=true NZ_JAATTN010000450.1 Protein Homology CDS 284 470 . + 0 ID=cds-WP_240944853.1;Parent=gene-HGK48_RS11005;Dbxref=GenBank:WP_240944853.1;Name=WP_240944853.1;Ontology_term=GO:0007165,GO:0005515;end_range=470,.;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849568.1;locus_tag=HGK48_RS11005;partial=true;product=PAS domain-containing protein;protein_id=WP_240944853.1;transl_table=11 ##sequence-region NZ_JAATTN010000451.1 1 460 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000451.1 RefSeq region 1 460 . + . ID=NZ_JAATTN010000451.1:1..460;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000451.1 RefSeq gene 1 460 . + . ID=gene-HGK48_RS11010;Name=HGK48_RS11010;end_range=460,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11010;partial=true;start_range=.,1 NZ_JAATTN010000451.1 Protein Homology CDS 1 460 . + 2 ID=cds-WP_168237026.1;Parent=gene-HGK48_RS11010;Dbxref=GenBank:WP_168237026.1;Name=WP_168237026.1;end_range=460,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010403161.1;locus_tag=HGK48_RS11010;partial=true;product=dihydropteroate synthase;protein_id=WP_168237026.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000452.1 1 537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000452.1 RefSeq region 1 537 . + . ID=NZ_JAATTN010000452.1:1..537;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000452.1 RefSeq gene 1 537 . - . ID=gene-HGK48_RS11015;Name=HGK48_RS11015;end_range=537,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11015;partial=true;start_range=.,1 NZ_JAATTN010000452.1 Protein Homology CDS 1 537 . - 0 ID=cds-WP_277346460.1;Parent=gene-HGK48_RS11015;Dbxref=GenBank:WP_277346460.1;Name=WP_277346460.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;end_range=537,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344285.1;locus_tag=HGK48_RS11015;partial=true;product=FtsK/SpoIIIE domain-containing protein;protein_id=WP_277346460.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000453.1 1 537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000453.1 RefSeq region 1 537 . + . ID=NZ_JAATTN010000453.1:1..537;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000453.1 RefSeq gene 140 457 . + . ID=gene-HGK48_RS11020;Name=HGK48_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11020 NZ_JAATTN010000453.1 Protein Homology CDS 140 457 . + 0 ID=cds-WP_002848103.1;Parent=gene-HGK48_RS11020;Dbxref=GenBank:WP_002848103.1;Name=WP_002848103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002780470.1;locus_tag=HGK48_RS11020;product=DUF2325 domain-containing protein;protein_id=WP_002848103.1;transl_table=11 ##sequence-region NZ_JAATTN010000454.1 1 533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000454.1 RefSeq region 1 533 . + . ID=NZ_JAATTN010000454.1:1..533;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000454.1 RefSeq gene 1 533 . - . ID=gene-HGK48_RS11025;Name=HGK48_RS11025;end_range=533,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11025;partial=true;start_range=.,1 NZ_JAATTN010000454.1 Protein Homology CDS 1 533 . - 2 ID=cds-WP_168237027.1;Parent=gene-HGK48_RS11025;Dbxref=GenBank:WP_168237027.1;Name=WP_168237027.1;end_range=533,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002781941.1;locus_tag=HGK48_RS11025;partial=true;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_168237027.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000455.1 1 527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000455.1 RefSeq region 1 527 . + . ID=NZ_JAATTN010000455.1:1..527;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000455.1 RefSeq gene 114 446 . + . ID=gene-HGK48_RS11030;Name=rrpB;gbkey=Gene;gene=rrpB;gene_biotype=protein_coding;locus_tag=HGK48_RS11030 NZ_JAATTN010000455.1 Protein Homology CDS 114 446 . + 0 ID=cds-WP_002849921.1;Parent=gene-HGK48_RS11030;Dbxref=GenBank:WP_002849921.1;Name=WP_002849921.1;gbkey=CDS;gene=rrpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849921.1;locus_tag=HGK48_RS11030;product=MarR family transcription factor RrpB;protein_id=WP_002849921.1;transl_table=11 ##sequence-region NZ_JAATTN010000456.1 1 522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000456.1 RefSeq region 1 522 . + . ID=NZ_JAATTN010000456.1:1..522;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000456.1 RefSeq gene 1 200 . - . ID=gene-HGK48_RS11035;Name=HGK48_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11035;partial=true;start_range=.,1 NZ_JAATTN010000456.1 GeneMarkS-2+ CDS 1 200 . - 0 ID=cds-WP_206120344.1;Parent=gene-HGK48_RS11035;Dbxref=GenBank:WP_206120344.1;Name=WP_206120344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11035;partial=true;product=hypothetical protein;protein_id=WP_206120344.1;start_range=.,1;transl_table=11 NZ_JAATTN010000456.1 RefSeq gene 193 483 . - . ID=gene-HGK48_RS11040;Name=HGK48_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11040 NZ_JAATTN010000456.1 GeneMarkS-2+ CDS 193 483 . - 0 ID=cds-WP_168237028.1;Parent=gene-HGK48_RS11040;Dbxref=GenBank:WP_168237028.1;Name=WP_168237028.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11040;product=hypothetical protein;protein_id=WP_168237028.1;transl_table=11 ##sequence-region NZ_JAATTN010000457.1 1 520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000457.1 RefSeq region 1 520 . + . ID=NZ_JAATTN010000457.1:1..520;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000457.1 RefSeq gene 72 509 . + . ID=gene-HGK48_RS11045;Name=HGK48_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11045 NZ_JAATTN010000457.1 GeneMarkS-2+ CDS 72 509 . + 0 ID=cds-WP_002849621.1;Parent=gene-HGK48_RS11045;Dbxref=GenBank:WP_002849621.1;Name=WP_002849621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11045;product=hypothetical protein;protein_id=WP_002849621.1;transl_table=11 ##sequence-region NZ_JAATTN010000458.1 1 437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000458.1 RefSeq region 1 437 . + . ID=NZ_JAATTN010000458.1:1..437;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000458.1 RefSeq gene 1 437 . - . ID=gene-HGK48_RS11050;Name=HGK48_RS11050;end_range=437,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11050;partial=true;start_range=.,1 NZ_JAATTN010000458.1 Protein Homology CDS 1 437 . - 0 ID=cds-WP_240944855.1;Parent=gene-HGK48_RS11050;Dbxref=GenBank:WP_240944855.1;Name=WP_240944855.1;end_range=437,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012001812.1;locus_tag=HGK48_RS11050;partial=true;product=AIR synthase related protein;protein_id=WP_240944855.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000459.1 1 512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000459.1 RefSeq region 1 512 . + . ID=NZ_JAATTN010000459.1:1..512;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000459.1 RefSeq pseudogene 1 357 . - . ID=gene-HGK48_RS11055;Name=HGK48_RS11055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11055;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000459.1 GeneMarkS-2+ CDS 1 357 . - 0 ID=cds-HGK48_RS11055;Parent=gene-HGK48_RS11055;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11055;partial=true;product=terminase large subunit domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000045.1 1 8650 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000045.1 RefSeq region 1 8650 . + . ID=NZ_JAATTN010000045.1:1..8650;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000045.1 RefSeq gene 355 714 . + . ID=gene-HGK48_RS03560;Name=HGK48_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03560 NZ_JAATTN010000045.1 Protein Homology CDS 355 714 . + 0 ID=cds-WP_002848151.1;Parent=gene-HGK48_RS03560;Dbxref=GenBank:WP_002848151.1;Name=WP_002848151.1;Ontology_term=GO:0016655,GO:0048038,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848151.1;locus_tag=HGK48_RS03560;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_002848151.1;transl_table=11 NZ_JAATTN010000045.1 RefSeq gene 705 1211 . + . ID=gene-HGK48_RS03565;Name=HGK48_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03565 NZ_JAATTN010000045.1 Protein Homology CDS 705 1211 . + 0 ID=cds-WP_002848153.1;Parent=gene-HGK48_RS03565;Dbxref=GenBank:WP_002848153.1;Name=WP_002848153.1;Ontology_term=GO:0015990,GO:0048038,GO:0051539,GO:0045271;gbkey=CDS;go_component=respiratory chain complex I|0045271||IEA;go_function=quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848153.1;locus_tag=HGK48_RS03565;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_002848153.1;transl_table=11 NZ_JAATTN010000045.1 RefSeq gene 1204 2889 . + . ID=gene-HGK48_RS03570;Name=HGK48_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03570 NZ_JAATTN010000045.1 Protein Homology CDS 1204 2889 . + 0 ID=cds-WP_002848154.1;Parent=gene-HGK48_RS03570;Dbxref=GenBank:WP_002848154.1;Name=WP_002848154.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848154.1;locus_tag=HGK48_RS03570;product=NADH-quinone oxidoreductase subunit D;protein_id=WP_002848154.1;transl_table=11 NZ_JAATTN010000045.1 RefSeq gene 2886 3377 . + . ID=gene-HGK48_RS03575;Name=HGK48_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03575 NZ_JAATTN010000045.1 Protein Homology CDS 2886 3377 . + 0 ID=cds-WP_002848156.1;Parent=gene-HGK48_RS03575;Dbxref=GenBank:WP_002848156.1;Name=WP_002848156.1;Ontology_term=GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: protein motif:HMM:NF013426.6;locus_tag=HGK48_RS03575;product=NADH-quinone oxidoreductase subunit NuoE family protein;protein_id=WP_002848156.1;transl_table=11 NZ_JAATTN010000045.1 RefSeq gene 3364 4584 . + . ID=gene-HGK48_RS03580;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=HGK48_RS03580 NZ_JAATTN010000045.1 Protein Homology CDS 3364 4584 . + 0 ID=cds-WP_002848158.1;Parent=gene-HGK48_RS03580;Dbxref=GenBank:WP_002848158.1;Name=WP_002848158.1;Ontology_term=GO:0008137,GO:0010181,GO:0051287,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,FMN binding|0010181||IEA,NAD binding|0051287||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848158.1;locus_tag=HGK48_RS03580;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_002848158.1;transl_table=11 NZ_JAATTN010000045.1 RefSeq gene 4584 5978 . + . ID=gene-HGK48_RS03585;Name=HGK48_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03585 NZ_JAATTN010000045.1 Protein Homology CDS 4584 5978 . + 0 ID=cds-WP_002848159.1;Parent=gene-HGK48_RS03585;Dbxref=GenBank:WP_002848159.1;Name=WP_002848159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024900.6;locus_tag=HGK48_RS03585;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_002848159.1;transl_table=11 NZ_JAATTN010000045.1 RefSeq gene 5975 7252 . + . ID=gene-HGK48_RS03590;Name=HGK48_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03590 NZ_JAATTN010000045.1 Protein Homology CDS 5975 7252 . + 0 ID=cds-WP_002848161.1;Parent=gene-HGK48_RS03590;Dbxref=GenBank:WP_002848161.1;Name=WP_002848161.1;Ontology_term=GO:0016655,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731719.1;locus_tag=HGK48_RS03590;product=complex I subunit 1/NuoH family protein;protein_id=WP_002848161.1;transl_table=11 NZ_JAATTN010000045.1 RefSeq gene 7242 7739 . + . ID=gene-HGK48_RS03595;Name=HGK48_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03595 NZ_JAATTN010000045.1 Protein Homology CDS 7242 7739 . + 0 ID=cds-WP_010402338.1;Parent=gene-HGK48_RS03595;Dbxref=GenBank:WP_010402338.1;Name=WP_010402338.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010402338.1;locus_tag=HGK48_RS03595;product=NuoI/complex I 23 kDa subunit family protein;protein_id=WP_010402338.1;transl_table=11 NZ_JAATTN010000045.1 RefSeq gene 7739 8233 . + . ID=gene-HGK48_RS03600;Name=HGK48_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03600 NZ_JAATTN010000045.1 Protein Homology CDS 7739 8233 . + 0 ID=cds-WP_002848163.1;Parent=gene-HGK48_RS03600;Dbxref=GenBank:WP_002848163.1;Name=WP_002848163.1;Ontology_term=GO:0008137,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,quinone binding|0048038||IEA;inference=COORDINATES: protein motif:HMM:NF012709.6;locus_tag=HGK48_RS03600;product=NADH-quinone oxidoreductase subunit J family protein;protein_id=WP_002848163.1;transl_table=11 NZ_JAATTN010000045.1 RefSeq gene 8226 8534 . + . ID=gene-HGK48_RS03605;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=HGK48_RS03605 NZ_JAATTN010000045.1 Protein Homology CDS 8226 8534 . + 0 ID=cds-WP_002848164.1;Parent=gene-HGK48_RS03605;Dbxref=GenBank:WP_002848164.1;Name=WP_002848164.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848164.1;locus_tag=HGK48_RS03605;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_002848164.1;transl_table=11 ##sequence-region NZ_JAATTN010000460.1 1 512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000460.1 RefSeq region 1 512 . + . ID=NZ_JAATTN010000460.1:1..512;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000460.1 RefSeq pseudogene 1 494 . + . ID=gene-HGK48_RS11060;Name=HGK48_RS11060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11060;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000460.1 Protein Homology CDS 1 494 . + 2 ID=cds-HGK48_RS11060;Parent=gene-HGK48_RS11060;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849266.1;locus_tag=HGK48_RS11060;partial=true;product=acetate kinase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000461.1 1 511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000461.1 RefSeq region 1 511 . + . ID=NZ_JAATTN010000461.1:1..511;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000461.1 RefSeq gene 1 511 . - . ID=gene-HGK48_RS11065;Name=HGK48_RS11065;end_range=511,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11065;partial=true;start_range=.,1 NZ_JAATTN010000461.1 GeneMarkS-2+ CDS 1 511 . - 1 ID=cds-WP_206120345.1;Parent=gene-HGK48_RS11065;Dbxref=GenBank:WP_206120345.1;Name=WP_206120345.1;end_range=511,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11065;partial=true;product=hypothetical protein;protein_id=WP_206120345.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAATTN010000046.1 1 8626 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000046.1 RefSeq region 1 8626 . + . ID=NZ_JAATTN010000046.1:1..8626;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000046.1 RefSeq gene 1 2548 . - . ID=gene-HGK48_RS03610;Name=HGK48_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03610;partial=true;start_range=.,1 NZ_JAATTN010000046.1 Protein Homology CDS 1 2548 . - 0 ID=cds-WP_168236684.1;Parent=gene-HGK48_RS03610;Dbxref=GenBank:WP_168236684.1;Name=WP_168236684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040129.5;locus_tag=HGK48_RS03610;partial=true;product=tape measure protein;protein_id=WP_168236684.1;start_range=.,1;transl_table=11 NZ_JAATTN010000046.1 RefSeq gene 2766 2981 . - . ID=gene-HGK48_RS03615;Name=HGK48_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03615 NZ_JAATTN010000046.1 GeneMarkS-2+ CDS 2766 2981 . - 0 ID=cds-WP_010403284.1;Parent=gene-HGK48_RS03615;Dbxref=GenBank:WP_010403284.1;Name=WP_010403284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS03615;product=hypothetical protein;protein_id=WP_010403284.1;transl_table=11 NZ_JAATTN010000046.1 RefSeq gene 3011 3475 . - . ID=gene-HGK48_RS03620;Name=HGK48_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03620 NZ_JAATTN010000046.1 Protein Homology CDS 3011 3475 . - 0 ID=cds-WP_002849065.1;Parent=gene-HGK48_RS03620;Dbxref=GenBank:WP_002849065.1;Name=WP_002849065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849065.1;locus_tag=HGK48_RS03620;product=hypothetical protein;protein_id=WP_002849065.1;transl_table=11 NZ_JAATTN010000046.1 RefSeq gene 3465 4163 . - . ID=gene-HGK48_RS03625;Name=HGK48_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03625 NZ_JAATTN010000046.1 Protein Homology CDS 3465 4163 . - 0 ID=cds-WP_002849064.1;Parent=gene-HGK48_RS03625;Dbxref=GenBank:WP_002849064.1;Name=WP_002849064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849064.1;locus_tag=HGK48_RS03625;product=hypothetical protein;protein_id=WP_002849064.1;transl_table=11 NZ_JAATTN010000046.1 RefSeq gene 4156 4521 . - . ID=gene-HGK48_RS03630;Name=HGK48_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03630 NZ_JAATTN010000046.1 GeneMarkS-2+ CDS 4156 4521 . - 0 ID=cds-WP_025370349.1;Parent=gene-HGK48_RS03630;Dbxref=GenBank:WP_025370349.1;Name=WP_025370349.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS03630;product=hypothetical protein;protein_id=WP_025370349.1;transl_table=11 NZ_JAATTN010000046.1 RefSeq gene 4506 4805 . - . ID=gene-HGK48_RS03635;Name=HGK48_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03635 NZ_JAATTN010000046.1 GeneMarkS-2+ CDS 4506 4805 . - 0 ID=cds-WP_065840841.1;Parent=gene-HGK48_RS03635;Dbxref=GenBank:WP_065840841.1;Name=WP_065840841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS03635;product=hypothetical protein;protein_id=WP_065840841.1;transl_table=11 NZ_JAATTN010000046.1 RefSeq gene 4795 5730 . - . ID=gene-HGK48_RS03640;Name=HGK48_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03640 NZ_JAATTN010000046.1 GeneMarkS-2+ CDS 4795 5730 . - 0 ID=cds-WP_168236685.1;Parent=gene-HGK48_RS03640;Dbxref=GenBank:WP_168236685.1;Name=WP_168236685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS03640;product=P2 family phage major capsid protein;protein_id=WP_168236685.1;transl_table=11 NZ_JAATTN010000046.1 RefSeq gene 5730 6473 . - . ID=gene-HGK48_RS03645;Name=HGK48_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03645 NZ_JAATTN010000046.1 Protein Homology CDS 5730 6473 . - 0 ID=cds-WP_168236686.1;Parent=gene-HGK48_RS03645;Dbxref=GenBank:WP_168236686.1;Name=WP_168236686.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025901.6;locus_tag=HGK48_RS03645;product=XkdF-like putative serine protease domain-containing protein;protein_id=WP_168236686.1;transl_table=11 NZ_JAATTN010000046.1 RefSeq gene 6605 7666 . + . ID=gene-HGK48_RS03650;Name=HGK48_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03650 NZ_JAATTN010000046.1 Protein Homology CDS 6605 7666 . + 0 ID=cds-WP_168236687.1;Parent=gene-HGK48_RS03650;Dbxref=GenBank:WP_168236687.1;Name=WP_168236687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731893.1;locus_tag=HGK48_RS03650;product=phage portal protein;protein_id=WP_168236687.1;transl_table=11 NZ_JAATTN010000046.1 RefSeq gene 7869 8626 . + . ID=gene-HGK48_RS03655;Name=HGK48_RS03655;end_range=8626,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03655;partial=true NZ_JAATTN010000046.1 Protein Homology CDS 7869 8626 . + 0 ID=cds-WP_168236688.1;Parent=gene-HGK48_RS03655;Dbxref=GenBank:WP_168236688.1;Name=WP_168236688.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=8626,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010404288.1;locus_tag=HGK48_RS03655;partial=true;product=transposase;protein_id=WP_168236688.1;transl_table=11 ##sequence-region NZ_JAATTN010000047.1 1 8325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000047.1 RefSeq region 1 8325 . + . ID=NZ_JAATTN010000047.1:1..8325;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000047.1 RefSeq gene 1 706 . + . ID=gene-HGK48_RS03660;Name=HGK48_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03660;partial=true;start_range=.,1 NZ_JAATTN010000047.1 Protein Homology CDS 1 706 . + 1 ID=cds-WP_168236689.1;Parent=gene-HGK48_RS03660;Dbxref=GenBank:WP_168236689.1;Name=WP_168236689.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848414.1;locus_tag=HGK48_RS03660;partial=true;product=branched-chain amino acid transaminase;protein_id=WP_168236689.1;start_range=.,1;transl_table=11 NZ_JAATTN010000047.1 RefSeq gene 724 1818 . + . ID=gene-HGK48_RS03665;Name=HGK48_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03665 NZ_JAATTN010000047.1 Protein Homology CDS 724 1818 . + 0 ID=cds-WP_011731770.1;Parent=gene-HGK48_RS03665;Dbxref=GenBank:WP_011731770.1;Name=WP_011731770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991774.1;locus_tag=HGK48_RS03665;product=SPFH domain-containing protein;protein_id=WP_011731770.1;transl_table=11 NZ_JAATTN010000047.1 RefSeq gene 1828 2559 . + . ID=gene-HGK48_RS03670;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=HGK48_RS03670 NZ_JAATTN010000047.1 Protein Homology CDS 1828 2559 . + 0 ID=cds-WP_011731769.1;Parent=gene-HGK48_RS03670;Dbxref=GenBank:WP_011731769.1;Name=WP_011731769.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731769.1;locus_tag=HGK48_RS03670;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_011731769.1;transl_table=11 NZ_JAATTN010000047.1 RefSeq gene 2543 3076 . + . ID=gene-HGK48_RS03675;Name=HGK48_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03675 NZ_JAATTN010000047.1 Protein Homology CDS 2543 3076 . + 0 ID=cds-WP_002848412.1;Parent=gene-HGK48_RS03675;Dbxref=GenBank:WP_002848412.1;Name=WP_002848412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848412.1;locus_tag=HGK48_RS03675;product=DUF2393 family protein;protein_id=WP_002848412.1;transl_table=11 NZ_JAATTN010000047.1 RefSeq gene 3076 3609 . + . ID=gene-HGK48_RS03680;Name=HGK48_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03680 NZ_JAATTN010000047.1 Protein Homology CDS 3076 3609 . + 0 ID=cds-WP_002848411.1;Parent=gene-HGK48_RS03680;Dbxref=GenBank:WP_002848411.1;Name=WP_002848411.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021163.6;locus_tag=HGK48_RS03680;product=DUF2393 family protein;protein_id=WP_002848411.1;transl_table=11 NZ_JAATTN010000047.1 RefSeq gene 3668 5008 . - . ID=gene-HGK48_RS03685;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=HGK48_RS03685 NZ_JAATTN010000047.1 Protein Homology CDS 3668 5008 . - 0 ID=cds-WP_002848409.1;Parent=gene-HGK48_RS03685;Dbxref=GenBank:WP_002848409.1;Name=WP_002848409.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002777919.1;locus_tag=HGK48_RS03685;product=amidophosphoribosyltransferase;protein_id=WP_002848409.1;transl_table=11 NZ_JAATTN010000047.1 RefSeq gene 5010 5774 . - . ID=gene-HGK48_RS03690;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=HGK48_RS03690 NZ_JAATTN010000047.1 Protein Homology CDS 5010 5774 . - 0 ID=cds-WP_002848407.1;Parent=gene-HGK48_RS03690;Dbxref=GenBank:WP_002848407.1;Name=WP_002848407.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867114.1;locus_tag=HGK48_RS03690;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_002848407.1;transl_table=11 NZ_JAATTN010000047.1 RefSeq gene 5968 6747 . - . ID=gene-HGK48_RS03695;Name=HGK48_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03695 NZ_JAATTN010000047.1 Protein Homology CDS 5968 6747 . - 0 ID=cds-WP_002848403.1;Parent=gene-HGK48_RS03695;Dbxref=GenBank:WP_002848403.1;Name=WP_002848403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002840159.1;locus_tag=HGK48_RS03695;product=complement resistance protein TraT;protein_id=WP_002848403.1;transl_table=11 NZ_JAATTN010000047.1 RefSeq gene 6839 7783 . - . ID=gene-HGK48_RS03700;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=HGK48_RS03700 NZ_JAATTN010000047.1 Protein Homology CDS 6839 7783 . - 0 ID=cds-WP_002848401.1;Parent=gene-HGK48_RS03700;Dbxref=GenBank:WP_002848401.1;Name=WP_002848401.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848401.1;locus_tag=HGK48_RS03700;product=thioredoxin-disulfide reductase;protein_id=WP_002848401.1;transl_table=11 NZ_JAATTN010000047.1 RefSeq gene 7901 8215 . - . ID=gene-HGK48_RS03705;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=HGK48_RS03705 NZ_JAATTN010000047.1 Protein Homology CDS 7901 8215 . - 0 ID=cds-WP_002848398.1;Parent=gene-HGK48_RS03705;Dbxref=GenBank:WP_002848398.1;Name=WP_002848398.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343607.1;locus_tag=HGK48_RS03705;product=thioredoxin;protein_id=WP_002848398.1;transl_table=11 ##sequence-region NZ_JAATTN010000048.1 1 8400 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000048.1 RefSeq region 1 8400 . + . ID=NZ_JAATTN010000048.1:1..8400;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000048.1 RefSeq gene 1 1295 . + . ID=gene-HGK48_RS03710;Name=pgp6;gbkey=Gene;gene=pgp6;gene_biotype=protein_coding;locus_tag=HGK48_RS03710;partial=true;start_range=.,1 NZ_JAATTN010000048.1 Protein Homology CDS 1 1295 . + 2 ID=cds-WP_168236690.1;Parent=gene-HGK48_RS03710;Dbxref=GenBank:WP_168236690.1;Name=WP_168236690.1;gbkey=CDS;gene=pgp6;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850497.1;locus_tag=HGK48_RS03710;partial=true;product=peptidoglycan metallopeptidase Pgp6;protein_id=WP_168236690.1;start_range=.,1;transl_table=11 NZ_JAATTN010000048.1 RefSeq gene 1350 2252 . + . ID=gene-HGK48_RS03715;Name=HGK48_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03715 NZ_JAATTN010000048.1 Protein Homology CDS 1350 2252 . + 0 ID=cds-WP_002850496.1;Parent=gene-HGK48_RS03715;Dbxref=GenBank:WP_002850496.1;Name=WP_002850496.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850496.1;locus_tag=HGK48_RS03715;product=PhzF family isomerase;protein_id=WP_002850496.1;transl_table=11 NZ_JAATTN010000048.1 RefSeq gene 2325 3209 . + . ID=gene-HGK48_RS03720;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=HGK48_RS03720 NZ_JAATTN010000048.1 Protein Homology CDS 2325 3209 . + 0 ID=cds-WP_002850494.1;Parent=gene-HGK48_RS03720;Dbxref=GenBank:WP_002850494.1;Name=WP_002850494.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002869857.1;locus_tag=HGK48_RS03720;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_002850494.1;transl_table=11 NZ_JAATTN010000048.1 RefSeq gene 3248 3652 . + . ID=gene-HGK48_RS03725;Name=HGK48_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03725 NZ_JAATTN010000048.1 Protein Homology CDS 3248 3652 . + 0 ID=cds-WP_002850492.1;Parent=gene-HGK48_RS03725;Dbxref=GenBank:WP_002850492.1;Name=WP_002850492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850492.1;locus_tag=HGK48_RS03725;product=hypothetical protein;protein_id=WP_002850492.1;transl_table=11 NZ_JAATTN010000048.1 RefSeq gene 3661 4542 . + . ID=gene-HGK48_RS03730;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=HGK48_RS03730 NZ_JAATTN010000048.1 Protein Homology CDS 3661 4542 . + 0 ID=cds-WP_011732230.1;Parent=gene-HGK48_RS03730;Dbxref=GenBank:WP_011732230.1;Name=WP_011732230.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002947519.1;locus_tag=HGK48_RS03730;product=homoserine kinase;protein_id=WP_011732230.1;transl_table=11 NZ_JAATTN010000048.1 RefSeq gene 4567 4809 . + . ID=gene-HGK48_RS03735;Name=HGK48_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03735 NZ_JAATTN010000048.1 Protein Homology CDS 4567 4809 . + 0 ID=cds-WP_023385890.1;Parent=gene-HGK48_RS03735;Dbxref=GenBank:WP_023385890.1;Name=WP_023385890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002859353.1;locus_tag=HGK48_RS03735;product=DUF448 domain-containing protein;protein_id=WP_023385890.1;transl_table=11 NZ_JAATTN010000048.1 RefSeq gene 4796 7312 . + . ID=gene-HGK48_RS03740;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=HGK48_RS03740 NZ_JAATTN010000048.1 Protein Homology CDS 4796 7312 . + 0 ID=cds-WP_002850489.1;Parent=gene-HGK48_RS03740;Dbxref=GenBank:WP_002850489.1;Name=WP_002850489.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850489.1;locus_tag=HGK48_RS03740;product=translation initiation factor IF-2;protein_id=WP_002850489.1;transl_table=11 NZ_JAATTN010000048.1 RefSeq gene 7309 7677 . + . ID=gene-HGK48_RS03745;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=HGK48_RS03745 NZ_JAATTN010000048.1 Protein Homology CDS 7309 7677 . + 0 ID=cds-WP_002850488.1;Parent=gene-HGK48_RS03745;Dbxref=GenBank:WP_002850488.1;Name=WP_002850488.1;gbkey=CDS;gene=rbfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850488.1;locus_tag=HGK48_RS03745;product=30S ribosome-binding factor RbfA;protein_id=WP_002850488.1;transl_table=11 NZ_JAATTN010000048.1 RefSeq gene 7674 8096 . + . ID=gene-HGK48_RS03750;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=HGK48_RS03750 NZ_JAATTN010000048.1 Protein Homology CDS 7674 8096 . + 0 ID=cds-WP_002850487.1;Parent=gene-HGK48_RS03750;Dbxref=GenBank:WP_002850487.1;Name=WP_002850487.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850487.1;locus_tag=HGK48_RS03750;product=ribosome maturation factor RimP;protein_id=WP_002850487.1;transl_table=11 NZ_JAATTN010000048.1 RefSeq gene 8098 8400 . - . ID=gene-HGK48_RS03755;Name=HGK48_RS03755;end_range=8400,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03755;partial=true NZ_JAATTN010000048.1 GeneMarkS-2+ CDS 8098 8400 . - 0 ID=cds-WP_206120294.1;Parent=gene-HGK48_RS03755;Dbxref=GenBank:WP_206120294.1;Name=WP_206120294.1;end_range=8400,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS03755;partial=true;product=hypothetical protein;protein_id=WP_206120294.1;transl_table=11 ##sequence-region NZ_JAATTN010000049.1 1 8280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000049.1 RefSeq region 1 8280 . + . ID=NZ_JAATTN010000049.1:1..8280;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000049.1 RefSeq gene 146 862 . + . ID=gene-HGK48_RS03760;Name=HGK48_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03760 NZ_JAATTN010000049.1 Protein Homology CDS 146 862 . + 0 ID=cds-WP_011731916.1;Parent=gene-HGK48_RS03760;Dbxref=GenBank:WP_011731916.1;Name=WP_011731916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731916.1;locus_tag=HGK48_RS03760;product=plasminogen-binding N-terminal domain-containing protein;protein_id=WP_011731916.1;transl_table=11 NZ_JAATTN010000049.1 RefSeq gene 864 2243 . + . ID=gene-HGK48_RS03765;Name=HGK48_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03765 NZ_JAATTN010000049.1 Protein Homology CDS 864 2243 . + 0 ID=cds-WP_002849100.1;Parent=gene-HGK48_RS03765;Dbxref=GenBank:WP_002849100.1;Name=WP_002849100.1;Ontology_term=GO:0003824,GO:0050660;gbkey=CDS;go_function=catalytic activity|0003824||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009495169.1;locus_tag=HGK48_RS03765;product=FAD-linked oxidase C-terminal domain-containing protein;protein_id=WP_002849100.1;transl_table=11 NZ_JAATTN010000049.1 RefSeq gene 2253 3053 . + . ID=gene-HGK48_RS03770;Name=HGK48_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03770 NZ_JAATTN010000049.1 Protein Homology CDS 2253 3053 . + 0 ID=cds-WP_168236691.1;Parent=gene-HGK48_RS03770;Dbxref=GenBank:WP_168236691.1;Name=WP_168236691.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849097.1;locus_tag=HGK48_RS03770;product=YihY family inner membrane protein;protein_id=WP_168236691.1;transl_table=11 NZ_JAATTN010000049.1 RefSeq gene 3059 3970 . - . ID=gene-HGK48_RS03775;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=HGK48_RS03775 NZ_JAATTN010000049.1 Protein Homology CDS 3059 3970 . - 0 ID=cds-WP_011731915.1;Parent=gene-HGK48_RS03775;Dbxref=GenBank:WP_011731915.1;Name=WP_011731915.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849096.1;locus_tag=HGK48_RS03775;product=hydroxymethylbilane synthase;protein_id=WP_011731915.1;transl_table=11 NZ_JAATTN010000049.1 RefSeq gene 3983 4375 . - . ID=gene-HGK48_RS03780;Name=HGK48_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03780 NZ_JAATTN010000049.1 Protein Homology CDS 3983 4375 . - 0 ID=cds-WP_002849094.1;Parent=gene-HGK48_RS03780;Dbxref=GenBank:WP_002849094.1;Name=WP_002849094.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF016102.6;locus_tag=HGK48_RS03780;product=FxsA family protein;protein_id=WP_002849094.1;transl_table=11 NZ_JAATTN010000049.1 RefSeq gene 4372 6075 . - . ID=gene-HGK48_RS03785;Name=HGK48_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03785 NZ_JAATTN010000049.1 Protein Homology CDS 4372 6075 . - 0 ID=cds-WP_002849093.1;Parent=gene-HGK48_RS03785;Dbxref=GenBank:WP_002849093.1;Name=WP_002849093.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849093.1;locus_tag=HGK48_RS03785;product=proline--tRNA ligase;protein_id=WP_002849093.1;transl_table=11 NZ_JAATTN010000049.1 RefSeq gene 6072 7340 . - . ID=gene-HGK48_RS03790;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=HGK48_RS03790 NZ_JAATTN010000049.1 Protein Homology CDS 6072 7340 . - 0 ID=cds-WP_002849091.1;Parent=gene-HGK48_RS03790;Dbxref=GenBank:WP_002849091.1;Name=WP_002849091.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849091.1;locus_tag=HGK48_RS03790;product=glutamyl-tRNA reductase;protein_id=WP_002849091.1;transl_table=11 NZ_JAATTN010000049.1 RefSeq gene 7340 8224 . - . ID=gene-HGK48_RS03795;Name=HGK48_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03795 NZ_JAATTN010000049.1 Protein Homology CDS 7340 8224 . - 0 ID=cds-WP_002849089.1;Parent=gene-HGK48_RS03795;Dbxref=GenBank:WP_002849089.1;Name=WP_002849089.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002856977.1;locus_tag=HGK48_RS03795;product=polyprenyl synthetase family protein;protein_id=WP_002849089.1;transl_table=11 ##sequence-region NZ_JAATTN010000004.1 1 23148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000004.1 RefSeq region 1 23148 . + . ID=NZ_JAATTN010000004.1:1..23148;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000004.1 RefSeq gene 1 965 . - . ID=gene-HGK48_RS00495;Name=HGK48_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00495;partial=true;start_range=.,1 NZ_JAATTN010000004.1 Protein Homology CDS 1 965 . - 0 ID=cds-WP_168236624.1;Parent=gene-HGK48_RS00495;Dbxref=GenBank:WP_168236624.1;Name=WP_168236624.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850273.1;locus_tag=HGK48_RS00495;partial=true;product=glycosyltransferase family 4 protein;protein_id=WP_168236624.1;start_range=.,1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 962 2041 . - . ID=gene-HGK48_RS00500;Name=HGK48_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00500 NZ_JAATTN010000004.1 Protein Homology CDS 962 2041 . - 0 ID=cds-WP_002850274.1;Parent=gene-HGK48_RS00500;Dbxref=GenBank:WP_002850274.1;Name=WP_002850274.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850274.1;locus_tag=HGK48_RS00500;product=glycosyltransferase family 9 protein;protein_id=WP_002850274.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 2031 3086 . - . ID=gene-HGK48_RS00505;Name=HGK48_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00505 NZ_JAATTN010000004.1 Protein Homology CDS 2031 3086 . - 0 ID=cds-WP_002850275.1;Parent=gene-HGK48_RS00505;Dbxref=GenBank:WP_002850275.1;Name=WP_002850275.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850275.1;locus_tag=HGK48_RS00505;product=glycosyltransferase family 4 protein;protein_id=WP_002850275.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 3083 4003 . - . ID=gene-HGK48_RS00510;Name=HGK48_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00510 NZ_JAATTN010000004.1 Protein Homology CDS 3083 4003 . - 0 ID=cds-WP_011732193.1;Parent=gene-HGK48_RS00510;Dbxref=GenBank:WP_011732193.1;Name=WP_011732193.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732193.1;locus_tag=HGK48_RS00510;product=glycosyltransferase family 9 protein;protein_id=WP_011732193.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 3975 5282 . - . ID=gene-HGK48_RS00515;Name=HGK48_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00515 NZ_JAATTN010000004.1 GeneMarkS-2+ CDS 3975 5282 . - 0 ID=cds-WP_002850276.1;Parent=gene-HGK48_RS00515;Dbxref=GenBank:WP_002850276.1;Name=WP_002850276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00515;product=hypothetical protein;protein_id=WP_002850276.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 5370 6401 . + . ID=gene-HGK48_RS00520;Name=HGK48_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00520 NZ_JAATTN010000004.1 Protein Homology CDS 5370 6401 . + 0 ID=cds-WP_002850277.1;Parent=gene-HGK48_RS00520;Dbxref=GenBank:WP_002850277.1;Name=WP_002850277.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850277.1;locus_tag=HGK48_RS00520;product=glycosyltransferase family 4 protein;protein_id=WP_002850277.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 6385 7329 . + . ID=gene-HGK48_RS00525;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=HGK48_RS00525 NZ_JAATTN010000004.1 Protein Homology CDS 6385 7329 . + 0 ID=cds-WP_002850278.1;Parent=gene-HGK48_RS00525;Dbxref=GenBank:WP_002850278.1;Name=WP_002850278.1;Ontology_term=GO:0009103,GO:0008920,GO:0016757;gbkey=CDS;gene=waaF;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA,glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850278.1;locus_tag=HGK48_RS00525;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_002850278.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 7295 7855 . - . ID=gene-HGK48_RS00530;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=HGK48_RS00530 NZ_JAATTN010000004.1 Protein Homology CDS 7295 7855 . - 0 ID=cds-WP_002850280.1;Parent=gene-HGK48_RS00530;Dbxref=GenBank:WP_002850280.1;Name=WP_002850280.1;Ontology_term=GO:0009244,GO:0008968;gbkey=CDS;gene=gmhA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850280.1;locus_tag=HGK48_RS00530;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_002850280.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 7865 8554 . - . ID=gene-HGK48_RS00535;Name=HGK48_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00535 NZ_JAATTN010000004.1 Protein Homology CDS 7865 8554 . - 0 ID=cds-WP_011732196.1;Parent=gene-HGK48_RS00535;Dbxref=GenBank:WP_011732196.1;Name=WP_011732196.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732196.1;locus_tag=HGK48_RS00535;product=aspartate/glutamate racemase family protein;protein_id=WP_011732196.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 8560 9936 . - . ID=gene-HGK48_RS00540;Name=rfaE1;gbkey=Gene;gene=rfaE1;gene_biotype=protein_coding;locus_tag=HGK48_RS00540 NZ_JAATTN010000004.1 Protein Homology CDS 8560 9936 . - 0 ID=cds-WP_011732197.1;Parent=gene-HGK48_RS00540;Dbxref=GenBank:WP_011732197.1;Name=WP_011732197.1;Ontology_term=GO:0005975,GO:0016773,GO:0016779;gbkey=CDS;gene=rfaE1;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732197.1;locus_tag=HGK48_RS00540;product=D-glycero-beta-D-manno-heptose-7-phosphate kinase;protein_id=WP_011732197.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 9929 10897 . - . ID=gene-HGK48_RS00545;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=HGK48_RS00545 NZ_JAATTN010000004.1 Protein Homology CDS 9929 10897 . - 0 ID=cds-WP_002850283.1;Parent=gene-HGK48_RS00545;Dbxref=GenBank:WP_002850283.1;Name=WP_002850283.1;Ontology_term=GO:0005975,GO:0009244,GO:0008712,GO:0050661;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA,NADP binding|0050661||IEA;go_process=carbohydrate metabolic process|0005975||IEA,lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850283.1;locus_tag=HGK48_RS00545;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_002850283.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 10894 11400 . - . ID=gene-HGK48_RS00550;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=HGK48_RS00550 NZ_JAATTN010000004.1 Protein Homology CDS 10894 11400 . - 0 ID=cds-WP_010404164.1;Parent=gene-HGK48_RS00550;Dbxref=GenBank:WP_010404164.1;Name=WP_010404164.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010404164.1;locus_tag=HGK48_RS00550;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_010404164.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 11531 11845 . + . ID=gene-HGK48_RS00555;Name=HGK48_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00555 NZ_JAATTN010000004.1 Protein Homology CDS 11531 11845 . + 0 ID=cds-WP_002850286.1;Parent=gene-HGK48_RS00555;Dbxref=GenBank:WP_002850286.1;Name=WP_002850286.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850286.1;locus_tag=HGK48_RS00555;product=c-type cytochrome;protein_id=WP_002850286.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 11908 12888 . - . ID=gene-HGK48_RS00560;Name=HGK48_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00560 NZ_JAATTN010000004.1 Protein Homology CDS 11908 12888 . - 0 ID=cds-WP_029662470.1;Parent=gene-HGK48_RS00560;Dbxref=GenBank:WP_029662470.1;Name=WP_029662470.1;Ontology_term=GO:0046903,GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;go_process=secretion|0046903||IEA;inference=COORDINATES: protein motif:HMM:NF015737.6;locus_tag=HGK48_RS00560;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_029662470.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 12881 14938 . - . ID=gene-HGK48_RS00565;Name=HGK48_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00565 NZ_JAATTN010000004.1 Protein Homology CDS 12881 14938 . - 0 ID=cds-WP_050981966.1;Parent=gene-HGK48_RS00565;Dbxref=GenBank:WP_050981966.1;Name=WP_050981966.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.6;locus_tag=HGK48_RS00565;product=S8 family serine peptidase;protein_id=WP_050981966.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 14904 15437 . - . ID=gene-HGK48_RS11345;Name=HGK48_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11345 NZ_JAATTN010000004.1 Protein Homology CDS 14904 15437 . - 0 ID=cds-WP_050981967.1;Parent=gene-HGK48_RS11345;Dbxref=GenBank:WP_050981967.1;Name=WP_050981967.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.6;locus_tag=HGK48_RS11345;product=S8 family serine peptidase;protein_id=WP_050981967.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 15665 15979 . + . ID=gene-HGK48_RS00575;Name=HGK48_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00575 NZ_JAATTN010000004.1 Protein Homology CDS 15665 15979 . + 0 ID=cds-WP_002850288.1;Parent=gene-HGK48_RS00575;Dbxref=GenBank:WP_002850288.1;Name=WP_002850288.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002863434.1;locus_tag=HGK48_RS00575;product=c-type cytochrome;protein_id=WP_002850288.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 15983 16213 . - . ID=gene-HGK48_RS00580;Name=ccoS;gbkey=Gene;gene=ccoS;gene_biotype=protein_coding;locus_tag=HGK48_RS00580 NZ_JAATTN010000004.1 Protein Homology CDS 15983 16213 . - 0 ID=cds-WP_010390783.1;Parent=gene-HGK48_RS00580;Dbxref=GenBank:WP_010390783.1;Name=WP_010390783.1;Ontology_term=GO:0008535;gbkey=CDS;gene=ccoS;go_process=respiratory chain complex IV assembly|0008535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010390783.1;locus_tag=HGK48_RS00580;product=cbb3-type cytochrome oxidase assembly protein CcoS;protein_id=WP_010390783.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 16216 18585 . - . ID=gene-HGK48_RS00585;Name=HGK48_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00585 NZ_JAATTN010000004.1 Protein Homology CDS 16216 18585 . - 0 ID=cds-WP_002850290.1;Parent=gene-HGK48_RS00585;Dbxref=GenBank:WP_002850290.1;Name=WP_002850290.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850290.1;locus_tag=HGK48_RS00585;product=heavy metal translocating P-type ATPase;protein_id=WP_002850290.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 19028 19138 . + . ID=gene-HGK48_RS00590;Name=HGK48_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00590 NZ_JAATTN010000004.1 Protein Homology CDS 19028 19138 . + 0 ID=cds-WP_144686099.1;Parent=gene-HGK48_RS00590;Dbxref=GenBank:WP_144686099.1;Name=WP_144686099.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF019843.6;locus_tag=HGK48_RS00590;product=SEL1-like repeat protein;protein_id=WP_144686099.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 19623 20957 . + . ID=gene-HGK48_RS00595;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=HGK48_RS00595 NZ_JAATTN010000004.1 Protein Homology CDS 19623 20957 . + 0 ID=cds-WP_002850294.1;Parent=gene-HGK48_RS00595;Dbxref=GenBank:WP_002850294.1;Name=WP_002850294.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850294.1;locus_tag=HGK48_RS00595;product=transcription termination factor Rho;protein_id=WP_002850294.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 20967 22580 . + . ID=gene-HGK48_RS00600;Name=HGK48_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00600 NZ_JAATTN010000004.1 Protein Homology CDS 20967 22580 . + 0 ID=cds-WP_010403398.1;Parent=gene-HGK48_RS00600;Dbxref=GenBank:WP_010403398.1;Name=WP_010403398.1;Ontology_term=GO:0006260,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732199.1;locus_tag=HGK48_RS00600;product=DNA polymerase III subunit gamma/tau;protein_id=WP_010403398.1;transl_table=11 NZ_JAATTN010000004.1 RefSeq gene 22577 23148 . - . ID=gene-HGK48_RS00605;Name=HGK48_RS00605;end_range=23148,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00605;partial=true NZ_JAATTN010000004.1 GeneMarkS-2+ CDS 22577 23148 . - 2 ID=cds-WP_168236625.1;Parent=gene-HGK48_RS00605;Dbxref=GenBank:WP_168236625.1;Name=WP_168236625.1;end_range=23148,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00605;partial=true;product=hypothetical protein;protein_id=WP_168236625.1;transl_table=11 ##sequence-region NZ_JAATTN010000050.1 1 8271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000050.1 RefSeq region 1 8271 . + . ID=NZ_JAATTN010000050.1:1..8271;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000050.1 RefSeq gene 1 871 . - . ID=gene-HGK48_RS03800;Name=HGK48_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03800;partial=true;start_range=.,1 NZ_JAATTN010000050.1 Protein Homology CDS 1 871 . - 0 ID=cds-WP_240944807.1;Parent=gene-HGK48_RS03800;Dbxref=GenBank:WP_240944807.1;Name=WP_240944807.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850470.1;locus_tag=HGK48_RS03800;partial=true;product=formate dehydrogenase subunit gamma;protein_id=WP_240944807.1;start_range=.,1;transl_table=11 NZ_JAATTN010000050.1 RefSeq gene 1186 2202 . + . ID=gene-HGK48_RS03805;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=HGK48_RS03805 NZ_JAATTN010000050.1 Protein Homology CDS 1186 2202 . + 0 ID=cds-WP_002850468.1;Parent=gene-HGK48_RS03805;Dbxref=GenBank:WP_002850468.1;Name=WP_002850468.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850468.1;locus_tag=HGK48_RS03805;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_002850468.1;transl_table=11 NZ_JAATTN010000050.1 RefSeq gene 2343 2675 . - . ID=gene-HGK48_RS03810;Name=HGK48_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03810 NZ_JAATTN010000050.1 GeneMarkS-2+ CDS 2343 2675 . - 0 ID=cds-WP_167497345.1;Parent=gene-HGK48_RS03810;Dbxref=GenBank:WP_167497345.1;Name=WP_167497345.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS03810;product=hypothetical protein;protein_id=WP_167497345.1;transl_table=11 NZ_JAATTN010000050.1 RefSeq gene 2651 2881 . - . ID=gene-HGK48_RS03815;Name=HGK48_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03815 NZ_JAATTN010000050.1 Protein Homology CDS 2651 2881 . - 0 ID=cds-WP_024305288.1;Parent=gene-HGK48_RS03815;Dbxref=GenBank:WP_024305288.1;Name=WP_024305288.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=HGK48_RS03815;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_024305288.1;transl_table=11 NZ_JAATTN010000050.1 RefSeq gene 2904 3380 . - . ID=gene-HGK48_RS03820;Name=HGK48_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03820 NZ_JAATTN010000050.1 GeneMarkS-2+ CDS 2904 3380 . - 0 ID=cds-WP_002850461.1;Parent=gene-HGK48_RS03820;Dbxref=GenBank:WP_002850461.1;Name=WP_002850461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS03820;product=hypothetical protein;protein_id=WP_002850461.1;transl_table=11 NZ_JAATTN010000050.1 RefSeq gene 3627 4907 . - . ID=gene-HGK48_RS03825;Name=HGK48_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03825 NZ_JAATTN010000050.1 Protein Homology CDS 3627 4907 . - 0 ID=cds-WP_002850458.1;Parent=gene-HGK48_RS03825;Dbxref=GenBank:WP_002850458.1;Name=WP_002850458.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732222.1;locus_tag=HGK48_RS03825;product=dihydroorotase;protein_id=WP_002850458.1;transl_table=11 NZ_JAATTN010000050.1 RefSeq gene 4911 5843 . - . ID=gene-HGK48_RS03830;Name=HGK48_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03830 NZ_JAATTN010000050.1 Protein Homology CDS 4911 5843 . - 0 ID=cds-WP_002850456.1;Parent=gene-HGK48_RS03830;Dbxref=GenBank:WP_002850456.1;Name=WP_002850456.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850456.1;locus_tag=HGK48_RS03830;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_002850456.1;transl_table=11 NZ_JAATTN010000050.1 RefSeq gene 5955 6884 . + . ID=gene-HGK48_RS03835;Name=HGK48_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03835 NZ_JAATTN010000050.1 Protein Homology CDS 5955 6884 . + 0 ID=cds-WP_002850454.1;Parent=gene-HGK48_RS03835;Dbxref=GenBank:WP_002850454.1;Name=WP_002850454.1;Ontology_term=GO:0006015,GO:0009156,GO:0009165,GO:0016310,GO:0000287,GO:0004749,GO:0005524,GO:0016301,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA,ribonucleoside monophosphate biosynthetic process|0009156||IEA,nucleotide biosynthetic process|0009165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018136129.1;locus_tag=HGK48_RS03835;product=ribose-phosphate pyrophosphokinase;protein_id=WP_002850454.1;transl_table=11 NZ_JAATTN010000050.1 RefSeq gene 7096 8271 . + . ID=gene-HGK48_RS03840;Name=lepA;end_range=8271,.;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=HGK48_RS03840;partial=true NZ_JAATTN010000050.1 Protein Homology CDS 7096 8271 . + 0 ID=cds-WP_168236693.1;Parent=gene-HGK48_RS03840;Dbxref=GenBank:WP_168236693.1;Name=WP_168236693.1;Ontology_term=GO:0003924,GO:0005525;end_range=8271,.;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850447.1;locus_tag=HGK48_RS03840;partial=true;product=translation elongation factor 4;protein_id=WP_168236693.1;transl_table=11 ##sequence-region NZ_JAATTN010000051.1 1 8240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000051.1 RefSeq region 1 8240 . + . ID=NZ_JAATTN010000051.1:1..8240;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000051.1 RefSeq gene 1 912 . - . ID=gene-HGK48_RS03845;Name=HGK48_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03845;partial=true;start_range=.,1 NZ_JAATTN010000051.1 Protein Homology CDS 1 912 . - 0 ID=cds-WP_168236694.1;Parent=gene-HGK48_RS03845;Dbxref=GenBank:WP_168236694.1;Name=WP_168236694.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731834.1;locus_tag=HGK48_RS03845;partial=true;product=AI-2E family transporter;protein_id=WP_168236694.1;start_range=.,1;transl_table=11 NZ_JAATTN010000051.1 RefSeq gene 905 1936 . - . ID=gene-HGK48_RS03850;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=HGK48_RS03850 NZ_JAATTN010000051.1 Protein Homology CDS 905 1936 . - 0 ID=cds-WP_011731833.1;Parent=gene-HGK48_RS03850;Dbxref=GenBank:WP_011731833.1;Name=WP_011731833.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848698.1;locus_tag=HGK48_RS03850;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_011731833.1;transl_table=11 NZ_JAATTN010000051.1 RefSeq gene 1946 2257 . - . ID=gene-HGK48_RS03855;Name=HGK48_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03855 NZ_JAATTN010000051.1 Protein Homology CDS 1946 2257 . - 0 ID=cds-WP_002848697.1;Parent=gene-HGK48_RS03855;Dbxref=GenBank:WP_002848697.1;Name=WP_002848697.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012790.6;locus_tag=HGK48_RS03855;product=rhodanese-like domain-containing protein;protein_id=WP_002848697.1;transl_table=11 NZ_JAATTN010000051.1 RefSeq gene 2241 3035 . - . ID=gene-HGK48_RS03860;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=HGK48_RS03860 NZ_JAATTN010000051.1 Protein Homology CDS 2241 3035 . - 0 ID=cds-WP_011731832.1;Parent=gene-HGK48_RS03860;Dbxref=GenBank:WP_011731832.1;Name=WP_011731832.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848696.1;locus_tag=HGK48_RS03860;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_011731832.1;transl_table=11 NZ_JAATTN010000051.1 RefSeq gene 3122 3538 . + . ID=gene-HGK48_RS03865;Name=HGK48_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03865 NZ_JAATTN010000051.1 Protein Homology CDS 3122 3538 . + 0 ID=cds-WP_002848695.1;Parent=gene-HGK48_RS03865;Dbxref=GenBank:WP_002848695.1;Name=WP_002848695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848695.1;locus_tag=HGK48_RS03865;product=hypothetical protein;protein_id=WP_002848695.1;transl_table=11 NZ_JAATTN010000051.1 RefSeq gene 3575 3935 . + . ID=gene-HGK48_RS03870;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=HGK48_RS03870 NZ_JAATTN010000051.1 cmsearch tmRNA 3575 3935 . + . ID=rna-HGK48_RS03870;Parent=gene-HGK48_RS03870;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS03870;product=transfer-messenger RNA NZ_JAATTN010000051.1 cmsearch exon 3575 3935 . + . ID=exon-HGK48_RS03870-1;Parent=rna-HGK48_RS03870;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=HGK48_RS03870;product=transfer-messenger RNA NZ_JAATTN010000051.1 RefSeq gene 4043 6496 . - . ID=gene-HGK48_RS03875;Name=HGK48_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03875 NZ_JAATTN010000051.1 GeneMarkS-2+ CDS 4043 6496 . - 0 ID=cds-WP_168236695.1;Parent=gene-HGK48_RS03875;Dbxref=GenBank:WP_168236695.1;Name=WP_168236695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS03875;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_168236695.1;transl_table=11 NZ_JAATTN010000051.1 RefSeq gene 6648 6779 . + . ID=gene-HGK48_RS11360;Name=HGK48_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11360 NZ_JAATTN010000051.1 GeneMarkS-2+ CDS 6648 6779 . + 0 ID=cds-WP_256364821.1;Parent=gene-HGK48_RS11360;Dbxref=GenBank:WP_256364821.1;Name=WP_256364821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11360;product=hypothetical protein;protein_id=WP_256364821.1;transl_table=11 NZ_JAATTN010000051.1 RefSeq gene 6793 7902 . - . ID=gene-HGK48_RS03880;Name=HGK48_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03880 NZ_JAATTN010000051.1 GeneMarkS-2+ CDS 6793 7902 . - 0 ID=cds-WP_024305496.1;Parent=gene-HGK48_RS03880;Dbxref=GenBank:WP_024305496.1;Name=WP_024305496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS03880;product=hypothetical protein;protein_id=WP_024305496.1;transl_table=11 ##sequence-region NZ_JAATTN010000052.1 1 8145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000052.1 RefSeq region 1 8145 . + . ID=NZ_JAATTN010000052.1:1..8145;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000052.1 RefSeq gene 1 1057 . - . ID=gene-HGK48_RS03885;Name=HGK48_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03885;partial=true;start_range=.,1 NZ_JAATTN010000052.1 Protein Homology CDS 1 1057 . - 0 ID=cds-WP_168236696.1;Parent=gene-HGK48_RS03885;Dbxref=GenBank:WP_168236696.1;Name=WP_168236696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046245.2;locus_tag=HGK48_RS03885;partial=true;product=Cas10/Cmr2 second palm domain-containing protein;protein_id=WP_168236696.1;start_range=.,1;transl_table=11 NZ_JAATTN010000052.1 RefSeq gene 1130 1711 . - . ID=gene-HGK48_RS03890;Name=HGK48_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03890 NZ_JAATTN010000052.1 GeneMarkS-2+ CDS 1130 1711 . - 0 ID=cds-WP_002850746.1;Parent=gene-HGK48_RS03890;Dbxref=GenBank:WP_002850746.1;Name=WP_002850746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS03890;product=hypothetical protein;protein_id=WP_002850746.1;transl_table=11 NZ_JAATTN010000052.1 RefSeq gene 1988 2062 . - . ID=gene-HGK48_RS03895;Name=HGK48_RS03895;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS03895 NZ_JAATTN010000052.1 tRNAscan-SE tRNA 1988 2062 . - . ID=rna-HGK48_RS03895;Parent=gene-HGK48_RS03895;anticodon=(pos:complement(2027..2029));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS03895;product=tRNA-Glu NZ_JAATTN010000052.1 tRNAscan-SE exon 1988 2062 . - . ID=exon-HGK48_RS03895-1;Parent=rna-HGK48_RS03895;anticodon=(pos:complement(2027..2029));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS03895;product=tRNA-Glu NZ_JAATTN010000052.1 RefSeq gene 2196 2672 . + . ID=gene-HGK48_RS03900;Name=HGK48_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03900 NZ_JAATTN010000052.1 GeneMarkS-2+ CDS 2196 2672 . + 0 ID=cds-WP_002850744.1;Parent=gene-HGK48_RS03900;Dbxref=GenBank:WP_002850744.1;Name=WP_002850744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS03900;product=hypothetical protein;protein_id=WP_002850744.1;transl_table=11 NZ_JAATTN010000052.1 RefSeq gene 2669 3517 . + . ID=gene-HGK48_RS03905;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=HGK48_RS03905 NZ_JAATTN010000052.1 Protein Homology CDS 2669 3517 . + 0 ID=cds-WP_002850743.1;Parent=gene-HGK48_RS03905;Dbxref=GenBank:WP_002850743.1;Name=WP_002850743.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850743.1;locus_tag=HGK48_RS03905;product=deoxyribonuclease IV;protein_id=WP_002850743.1;transl_table=11 NZ_JAATTN010000052.1 RefSeq gene 3517 4800 . + . ID=gene-HGK48_RS03910;Name=HGK48_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03910 NZ_JAATTN010000052.1 Protein Homology CDS 3517 4800 . + 0 ID=cds-WP_002850742.1;Parent=gene-HGK48_RS03910;Dbxref=GenBank:WP_002850742.1;Name=WP_002850742.1;Ontology_term=GO:0055085,GO:0015267,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF015316.6;locus_tag=HGK48_RS03910;product=OmpP1/FadL family transporter;protein_id=WP_002850742.1;transl_table=11 NZ_JAATTN010000052.1 RefSeq gene 4803 6347 . + . ID=gene-HGK48_RS03915;Name=HGK48_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03915 NZ_JAATTN010000052.1 Protein Homology CDS 4803 6347 . + 0 ID=cds-WP_024305177.1;Parent=gene-HGK48_RS03915;Dbxref=GenBank:WP_024305177.1;Name=WP_024305177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732305.1;locus_tag=HGK48_RS03915;product=fatty acid--CoA ligase;protein_id=WP_024305177.1;transl_table=11 NZ_JAATTN010000052.1 RefSeq gene 6344 8053 . + . ID=gene-HGK48_RS03920;Name=HGK48_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03920 NZ_JAATTN010000052.1 Protein Homology CDS 6344 8053 . + 0 ID=cds-WP_011732304.1;Parent=gene-HGK48_RS03920;Dbxref=GenBank:WP_011732304.1;Name=WP_011732304.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732304.1;locus_tag=HGK48_RS03920;product=ATP-binding protein;protein_id=WP_011732304.1;transl_table=11 ##sequence-region NZ_JAATTN010000053.1 1 8035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000053.1 RefSeq region 1 8035 . + . ID=NZ_JAATTN010000053.1:1..8035;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000053.1 RefSeq gene 1 3898 . - . ID=gene-HGK48_RS03925;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=HGK48_RS03925;partial=true;start_range=.,1 NZ_JAATTN010000053.1 Protein Homology CDS 1 3898 . - 0 ID=cds-WP_168236697.1;Parent=gene-HGK48_RS03925;Dbxref=GenBank:WP_168236697.1;Name=WP_168236697.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343913.1;locus_tag=HGK48_RS03925;partial=true;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_168236697.1;start_range=.,1;transl_table=11 NZ_JAATTN010000053.1 RefSeq gene 3891 8030 . - . ID=gene-HGK48_RS03930;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=HGK48_RS03930 NZ_JAATTN010000053.1 Protein Homology CDS 3891 8030 . - 0 ID=cds-WP_024305395.1;Parent=gene-HGK48_RS03930;Dbxref=GenBank:WP_024305395.1;Name=WP_024305395.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009493408.1;locus_tag=HGK48_RS03930;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_024305395.1;transl_table=11 ##sequence-region NZ_JAATTN010000054.1 1 8016 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000054.1 RefSeq region 1 8016 . + . ID=NZ_JAATTN010000054.1:1..8016;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000054.1 RefSeq pseudogene 117 401 . - . ID=gene-HGK48_RS03935;Name=HGK48_RS03935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS03935;partial=true;pseudo=true;start_range=.,117 NZ_JAATTN010000054.1 Protein Homology CDS 117 401 . - 0 ID=cds-HGK48_RS03935;Parent=gene-HGK48_RS03935;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344644.1;locus_tag=HGK48_RS03935;partial=true;product=polyribonucleotide nucleotidyltransferase;pseudo=true;start_range=.,117;transl_table=11 NZ_JAATTN010000054.1 RefSeq gene 411 1091 . - . ID=gene-HGK48_RS03940;Name=HGK48_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03940 NZ_JAATTN010000054.1 Protein Homology CDS 411 1091 . - 0 ID=cds-WP_002850043.1;Parent=gene-HGK48_RS03940;Dbxref=GenBank:WP_002850043.1;Name=WP_002850043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850043.1;locus_tag=HGK48_RS03940;product=phosphoribosyltransferase family protein;protein_id=WP_002850043.1;transl_table=11 NZ_JAATTN010000054.1 RefSeq gene 1088 1771 . - . ID=gene-HGK48_RS11160;Name=HGK48_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11160 NZ_JAATTN010000054.1 GeneMarkS-2+ CDS 1088 1771 . - 0 ID=cds-WP_240944808.1;Parent=gene-HGK48_RS11160;Dbxref=GenBank:WP_240944808.1;Name=WP_240944808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11160;product=LPS-assembly protein LptD;protein_id=WP_240944808.1;transl_table=11 NZ_JAATTN010000054.1 RefSeq gene 2087 3274 . - . ID=gene-HGK48_RS11165;Name=HGK48_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11165 NZ_JAATTN010000054.1 Protein Homology CDS 2087 3274 . - 0 ID=cds-WP_394352677.1;Parent=gene-HGK48_RS11165;Dbxref=GenBank:WP_394352677.1;Name=WP_394352677.1;Ontology_term=GO:0015920;gbkey=CDS;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: protein motif:HMM:NF024500.6;locus_tag=HGK48_RS11165;product=LPS-assembly protein LptD;protein_id=WP_394352677.1;transl_table=11 NZ_JAATTN010000054.1 RefSeq gene 3264 3719 . - . ID=gene-HGK48_RS03950;Name=HGK48_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03950 NZ_JAATTN010000054.1 Protein Homology CDS 3264 3719 . - 0 ID=cds-WP_002850047.1;Parent=gene-HGK48_RS03950;Dbxref=GenBank:WP_002850047.1;Name=WP_002850047.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732139.1;locus_tag=HGK48_RS03950;product=RDD family protein;protein_id=WP_002850047.1;transl_table=11 NZ_JAATTN010000054.1 RefSeq gene 3716 4963 . - . ID=gene-HGK48_RS03955;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=HGK48_RS03955 NZ_JAATTN010000054.1 Protein Homology CDS 3716 4963 . - 0 ID=cds-WP_002850049.1;Parent=gene-HGK48_RS03955;Dbxref=GenBank:WP_002850049.1;Name=WP_002850049.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009294275.1;locus_tag=HGK48_RS03955;product=phosphoribosylamine--glycine ligase;protein_id=WP_002850049.1;transl_table=11 NZ_JAATTN010000054.1 RefSeq gene 5220 5855 . - . ID=gene-HGK48_RS03960;Name=HGK48_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03960 NZ_JAATTN010000054.1 Protein Homology CDS 5220 5855 . - 0 ID=cds-WP_002850051.1;Parent=gene-HGK48_RS03960;Dbxref=GenBank:WP_002850051.1;Name=WP_002850051.1;Ontology_term=GO:0006780,GO:0006782,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,protoporphyrinogen IX biosynthetic process|0006782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850051.1;locus_tag=HGK48_RS03960;product=uroporphyrinogen-III synthase;protein_id=WP_002850051.1;transl_table=11 NZ_JAATTN010000054.1 RefSeq gene 5860 6333 . - . ID=gene-HGK48_RS03965;Name=HGK48_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS03965 NZ_JAATTN010000054.1 Protein Homology CDS 5860 6333 . - 0 ID=cds-WP_002850053.1;Parent=gene-HGK48_RS03965;Dbxref=GenBank:WP_002850053.1;Name=WP_002850053.1;Ontology_term=GO:0006285,GO:0033958;gbkey=CDS;go_function=DNA-deoxyinosine glycosylase activity|0033958||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850053.1;locus_tag=HGK48_RS03965;product=DNA-deoxyinosine glycosylase;protein_id=WP_002850053.1;transl_table=11 NZ_JAATTN010000054.1 RefSeq gene 6348 7880 . - . ID=gene-HGK48_RS03970;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=HGK48_RS03970 NZ_JAATTN010000054.1 Protein Homology CDS 6348 7880 . - 0 ID=cds-WP_002850054.1;Parent=gene-HGK48_RS03970;Dbxref=GenBank:WP_002850054.1;Name=WP_002850054.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344639.1;locus_tag=HGK48_RS03970;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_002850054.1;transl_table=11 ##sequence-region NZ_JAATTN010000055.1 1 7970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000055.1 RefSeq region 1 7970 . + . ID=NZ_JAATTN010000055.1:1..7970;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000055.1 RefSeq gene 1 498 . - . ID=gene-HGK48_RS03975;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=HGK48_RS03975;partial=true;start_range=.,1 NZ_JAATTN010000055.1 Protein Homology CDS 1 498 . - 0 ID=cds-WP_168236698.1;Parent=gene-HGK48_RS03975;Dbxref=GenBank:WP_168236698.1;Name=WP_168236698.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009295072.1;locus_tag=HGK48_RS03975;partial=true;product=peptide deformylase;protein_id=WP_168236698.1;start_range=.,1;transl_table=11 NZ_JAATTN010000055.1 RefSeq gene 499 1581 . - . ID=gene-HGK48_RS11445;Name=HGK48_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11445 NZ_JAATTN010000055.1 Protein Homology CDS 499 1581 . - 0 ID=cds-WP_168236699.1;Parent=gene-HGK48_RS11445;Dbxref=GenBank:WP_168236699.1;Name=WP_168236699.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=HGK48_RS11445;product=GGDEF domain-containing protein;protein_id=WP_168236699.1;transl_table=11 NZ_JAATTN010000055.1 RefSeq gene 1593 2183 . - . ID=gene-HGK48_RS03985;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=HGK48_RS03985 NZ_JAATTN010000055.1 Protein Homology CDS 1593 2183 . - 0 ID=cds-WP_002850769.1;Parent=gene-HGK48_RS03985;Dbxref=GenBank:WP_002850769.1;Name=WP_002850769.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850769.1;locus_tag=HGK48_RS03985;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_002850769.1;transl_table=11 NZ_JAATTN010000055.1 RefSeq gene 2183 3490 . - . ID=gene-HGK48_RS03990;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=HGK48_RS03990 NZ_JAATTN010000055.1 Protein Homology CDS 2183 3490 . - 0 ID=cds-WP_002850770.1;Parent=gene-HGK48_RS03990;Dbxref=GenBank:WP_002850770.1;Name=WP_002850770.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850770.1;locus_tag=HGK48_RS03990;product=trigger factor;protein_id=WP_002850770.1;transl_table=11 NZ_JAATTN010000055.1 RefSeq gene 3624 4211 . + . ID=gene-HGK48_RS03995;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=HGK48_RS03995 NZ_JAATTN010000055.1 Protein Homology CDS 3624 4211 . + 0 ID=cds-WP_002850772.1;Parent=gene-HGK48_RS03995;Dbxref=GenBank:WP_002850772.1;Name=WP_002850772.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850772.1;locus_tag=HGK48_RS03995;product=GTP cyclohydrolase I FolE;protein_id=WP_002850772.1;transl_table=11 NZ_JAATTN010000055.1 RefSeq gene 4208 5512 . + . ID=gene-HGK48_RS04000;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=HGK48_RS04000 NZ_JAATTN010000055.1 Protein Homology CDS 4208 5512 . + 0 ID=cds-WP_002850774.1;Parent=gene-HGK48_RS04000;Dbxref=GenBank:WP_002850774.1;Name=WP_002850774.1;Ontology_term=GO:0030254,GO:0005524,GO:0016887,GO:0030257;gbkey=CDS;gene=fliI;go_component=type III protein secretion system complex|0030257||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850774.1;locus_tag=HGK48_RS04000;product=flagellar protein export ATPase FliI;protein_id=WP_002850774.1;transl_table=11 NZ_JAATTN010000055.1 RefSeq gene 5709 6899 . + . ID=gene-HGK48_RS04005;Name=HGK48_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04005 NZ_JAATTN010000055.1 Protein Homology CDS 5709 6899 . + 0 ID=cds-WP_002850776.1;Parent=gene-HGK48_RS04005;Dbxref=GenBank:WP_002850776.1;Name=WP_002850776.1;Ontology_term=GO:0006534,GO:0031071;gbkey=CDS;go_function=cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004317998.1;locus_tag=HGK48_RS04005;product=NifS family cysteine desulfurase;protein_id=WP_002850776.1;transl_table=11 NZ_JAATTN010000055.1 RefSeq gene 6921 7922 . + . ID=gene-HGK48_RS04010;Name=HGK48_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04010 NZ_JAATTN010000055.1 Protein Homology CDS 6921 7922 . + 0 ID=cds-WP_002850779.1;Parent=gene-HGK48_RS04010;Dbxref=GenBank:WP_002850779.1;Name=WP_002850779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949428.1;locus_tag=HGK48_RS04010;product=iron-sulfur cluster assembly scaffold protein NifU;protein_id=WP_002850779.1;transl_table=11 ##sequence-region NZ_JAATTN010000056.1 1 7707 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000056.1 RefSeq region 1 7707 . + . ID=NZ_JAATTN010000056.1:1..7707;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000056.1 RefSeq gene 104 898 . - . ID=gene-HGK48_RS04015;Name=HGK48_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04015 NZ_JAATTN010000056.1 Protein Homology CDS 104 898 . - 0 ID=cds-WP_002849258.1;Parent=gene-HGK48_RS04015;Dbxref=GenBank:WP_002849258.1;Name=WP_002849258.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731963.1;locus_tag=HGK48_RS04015;product=CheR family methyltransferase;protein_id=WP_002849258.1;transl_table=11 NZ_JAATTN010000056.1 RefSeq gene 891 1457 . - . ID=gene-HGK48_RS04020;Name=HGK48_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04020 NZ_JAATTN010000056.1 Protein Homology CDS 891 1457 . - 0 ID=cds-WP_002849259.1;Parent=gene-HGK48_RS04020;Dbxref=GenBank:WP_002849259.1;Name=WP_002849259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849259.1;locus_tag=HGK48_RS04020;product=CheB methylesterase domain-containing protein;protein_id=WP_002849259.1;transl_table=11 NZ_JAATTN010000056.1 RefSeq gene 1668 3548 . + . ID=gene-HGK48_RS04025;Name=HGK48_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04025 NZ_JAATTN010000056.1 Protein Homology CDS 1668 3548 . + 0 ID=cds-WP_002849260.1;Parent=gene-HGK48_RS04025;Dbxref=GenBank:WP_002849260.1;Name=WP_002849260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042647.4;locus_tag=HGK48_RS04025;product=flagellar assembly protein A;protein_id=WP_002849260.1;transl_table=11 NZ_JAATTN010000056.1 RefSeq gene 3551 4105 . + . ID=gene-HGK48_RS04030;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=HGK48_RS04030 NZ_JAATTN010000056.1 Protein Homology CDS 3551 4105 . + 0 ID=cds-WP_002849261.1;Parent=gene-HGK48_RS04030;Dbxref=GenBank:WP_002849261.1;Name=WP_002849261.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849261.1;locus_tag=HGK48_RS04030;product=Holliday junction branch migration protein RuvA;protein_id=WP_002849261.1;transl_table=11 NZ_JAATTN010000056.1 RefSeq gene 4114 5151 . + . ID=gene-HGK48_RS04035;Name=HGK48_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04035 NZ_JAATTN010000056.1 Protein Homology CDS 4114 5151 . + 0 ID=cds-WP_002849262.1;Parent=gene-HGK48_RS04035;Dbxref=GenBank:WP_002849262.1;Name=WP_002849262.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849262.1;locus_tag=HGK48_RS04035;product=D-alanine--D-alanine ligase;protein_id=WP_002849262.1;transl_table=11 NZ_JAATTN010000056.1 RefSeq gene 5220 5456 . + . ID=gene-HGK48_RS04040;Name=HGK48_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04040 NZ_JAATTN010000056.1 Protein Homology CDS 5220 5456 . + 0 ID=cds-WP_002849263.1;Parent=gene-HGK48_RS04040;Dbxref=GenBank:WP_002849263.1;Name=WP_002849263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849263.1;locus_tag=HGK48_RS04040;product=prevent-host-death protein;protein_id=WP_002849263.1;transl_table=11 NZ_JAATTN010000056.1 RefSeq gene 5446 6240 . + . ID=gene-HGK48_RS04045;Name=HGK48_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04045 NZ_JAATTN010000056.1 Protein Homology CDS 5446 6240 . + 0 ID=cds-WP_002849264.1;Parent=gene-HGK48_RS04045;Dbxref=GenBank:WP_002849264.1;Name=WP_002849264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731964.1;locus_tag=HGK48_RS04045;product=alpha/beta fold hydrolase;protein_id=WP_002849264.1;transl_table=11 NZ_JAATTN010000056.1 RefSeq gene 6233 7669 . + . ID=gene-HGK48_RS04050;Name=HGK48_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04050 NZ_JAATTN010000056.1 Protein Homology CDS 6233 7669 . + 0 ID=cds-WP_002849265.1;Parent=gene-HGK48_RS04050;Dbxref=GenBank:WP_002849265.1;Name=WP_002849265.1;Ontology_term=GO:0009058,GO:0005524,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002852462.1;locus_tag=HGK48_RS04050;product=Mur ligase family protein;protein_id=WP_002849265.1;transl_table=11 ##sequence-region NZ_JAATTN010000057.1 1 7568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000057.1 RefSeq region 1 7568 . + . ID=NZ_JAATTN010000057.1:1..7568;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000057.1 RefSeq gene 1 260 . - . ID=gene-HGK48_RS04055;Name=HGK48_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04055;partial=true;start_range=.,1 NZ_JAATTN010000057.1 GeneMarkS-2+ CDS 1 260 . - 0 ID=cds-WP_168236700.1;Parent=gene-HGK48_RS04055;Dbxref=GenBank:WP_168236700.1;Name=WP_168236700.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04055;partial=true;product=hypothetical protein;protein_id=WP_168236700.1;start_range=.,1;transl_table=11 NZ_JAATTN010000057.1 RefSeq gene 268 1941 . - . ID=gene-HGK48_RS04060;Name=HGK48_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04060 NZ_JAATTN010000057.1 Protein Homology CDS 268 1941 . - 0 ID=cds-WP_011732137.1;Parent=gene-HGK48_RS04060;Dbxref=GenBank:WP_011732137.1;Name=WP_011732137.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002902703.1;locus_tag=HGK48_RS04060;product=30S ribosomal protein S1;protein_id=WP_011732137.1;transl_table=11 NZ_JAATTN010000057.1 RefSeq gene 2042 2881 . - . ID=gene-HGK48_RS04065;Name=HGK48_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04065 NZ_JAATTN010000057.1 Protein Homology CDS 2042 2881 . - 0 ID=cds-WP_002850022.1;Parent=gene-HGK48_RS04065;Dbxref=GenBank:WP_002850022.1;Name=WP_002850022.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850022.1;locus_tag=HGK48_RS04065;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_002850022.1;transl_table=11 NZ_JAATTN010000057.1 RefSeq gene 2871 4148 . - . ID=gene-HGK48_RS04070;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=HGK48_RS04070 NZ_JAATTN010000057.1 Protein Homology CDS 2871 4148 . - 0 ID=cds-WP_002850025.1;Parent=gene-HGK48_RS04070;Dbxref=GenBank:WP_002850025.1;Name=WP_002850025.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850025.1;locus_tag=HGK48_RS04070;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_002850025.1;transl_table=11 NZ_JAATTN010000057.1 RefSeq gene 4145 6481 . - . ID=gene-HGK48_RS04075;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=HGK48_RS04075 NZ_JAATTN010000057.1 Protein Homology CDS 4145 6481 . - 0 ID=cds-WP_002850027.1;Parent=gene-HGK48_RS04075;Dbxref=GenBank:WP_002850027.1;Name=WP_002850027.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850027.1;locus_tag=HGK48_RS04075;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_002850027.1;transl_table=11 NZ_JAATTN010000057.1 RefSeq gene 6478 7470 . - . ID=gene-HGK48_RS04080;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=HGK48_RS04080 NZ_JAATTN010000057.1 Protein Homology CDS 6478 7470 . - 0 ID=cds-WP_002850029.1;Parent=gene-HGK48_RS04080;Dbxref=GenBank:WP_002850029.1;Name=WP_002850029.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009650151.1;locus_tag=HGK48_RS04080;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_002850029.1;transl_table=11 ##sequence-region NZ_JAATTN010000058.1 1 7532 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000058.1 RefSeq region 1 7532 . + . ID=NZ_JAATTN010000058.1:1..7532;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000058.1 RefSeq pseudogene 1 532 . - . ID=gene-HGK48_RS11510;Name=HGK48_RS11510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11510;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000058.1 Protein Homology CDS 1 532 . - 0 ID=cds-HGK48_RS11510;Parent=gene-HGK48_RS11510;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF015549.6;locus_tag=HGK48_RS11510;partial=true;product=AzlC family ABC transporter permease;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000058.1 RefSeq gene 728 3301 . - . ID=gene-HGK48_RS04095;Name=HGK48_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04095 NZ_JAATTN010000058.1 Protein Homology CDS 728 3301 . - 0 ID=cds-WP_002849479.1;Parent=gene-HGK48_RS04095;Dbxref=GenBank:WP_002849479.1;Name=WP_002849479.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732011.1;locus_tag=HGK48_RS04095;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_002849479.1;transl_table=11 NZ_JAATTN010000058.1 RefSeq gene 3464 4765 . + . ID=gene-HGK48_RS04100;Name=HGK48_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04100 NZ_JAATTN010000058.1 Protein Homology CDS 3464 4765 . + 0 ID=cds-WP_372683080.1;Parent=gene-HGK48_RS04100;Dbxref=GenBank:WP_372683080.1;Name=WP_372683080.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901396.1;locus_tag=HGK48_RS04100;product=S41 family peptidase;protein_id=WP_372683080.1;transl_table=11 NZ_JAATTN010000058.1 RefSeq gene 4776 5489 . + . ID=gene-HGK48_RS04105;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=HGK48_RS04105 NZ_JAATTN010000058.1 Protein Homology CDS 4776 5489 . + 0 ID=cds-WP_002849483.1;Parent=gene-HGK48_RS04105;Dbxref=GenBank:WP_002849483.1;Name=WP_002849483.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009293856.1;locus_tag=HGK48_RS04105;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_002849483.1;transl_table=11 NZ_JAATTN010000058.1 RefSeq gene 5618 5848 . + . ID=gene-HGK48_RS04110;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=HGK48_RS04110 NZ_JAATTN010000058.1 Protein Homology CDS 5618 5848 . + 0 ID=cds-WP_002849484.1;Parent=gene-HGK48_RS04110;Dbxref=GenBank:WP_002849484.1;Name=WP_002849484.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849484.1;locus_tag=HGK48_RS04110;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_002849484.1;transl_table=11 NZ_JAATTN010000058.1 RefSeq gene 5851 6516 . + . ID=gene-HGK48_RS04115;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=HGK48_RS04115 NZ_JAATTN010000058.1 Protein Homology CDS 5851 6516 . + 0 ID=cds-WP_002849485.1;Parent=gene-HGK48_RS04115;Dbxref=GenBank:WP_002849485.1;Name=WP_002849485.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950758.1;locus_tag=HGK48_RS04115;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WP_002849485.1;transl_table=11 NZ_JAATTN010000058.1 RefSeq gene 6510 7532 . + . ID=gene-HGK48_RS04120;Name=HGK48_RS04120;end_range=7532,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04120;partial=true NZ_JAATTN010000058.1 GeneMarkS-2+ CDS 6510 7532 . + 0 ID=cds-WP_168236702.1;Parent=gene-HGK48_RS04120;Dbxref=GenBank:WP_168236702.1;Name=WP_168236702.1;end_range=7532,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04120;partial=true;product=hypothetical protein;protein_id=WP_168236702.1;transl_table=11 ##sequence-region NZ_JAATTN010000059.1 1 7503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000059.1 RefSeq region 1 7503 . + . ID=NZ_JAATTN010000059.1:1..7503;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000059.1 RefSeq gene 1 3593 . - . ID=gene-HGK48_RS04125;Name=HGK48_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04125;partial=true;start_range=.,1 NZ_JAATTN010000059.1 Protein Homology CDS 1 3593 . - 0 ID=cds-WP_168236703.1;Parent=gene-HGK48_RS04125;Dbxref=GenBank:WP_168236703.1;Name=WP_168236703.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=HGK48_RS04125;partial=true;product=PAS domain S-box protein;protein_id=WP_168236703.1;start_range=.,1;transl_table=11 NZ_JAATTN010000059.1 RefSeq gene 3627 3724 . - . ID=gene-HGK48_RS04130;Name=HGK48_RS04130;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS04130 NZ_JAATTN010000059.1 tRNAscan-SE tRNA 3627 3724 . - . ID=rna-HGK48_RS04130;Parent=gene-HGK48_RS04130;anticodon=(pos:complement(3688..3690));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS04130;product=tRNA-Sec NZ_JAATTN010000059.1 tRNAscan-SE exon 3627 3724 . - . ID=exon-HGK48_RS04130-1;Parent=rna-HGK48_RS04130;anticodon=(pos:complement(3688..3690));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS04130;product=tRNA-Sec NZ_JAATTN010000059.1 RefSeq gene 3853 4428 . + . ID=gene-HGK48_RS04135;Name=HGK48_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04135 NZ_JAATTN010000059.1 Protein Homology CDS 3853 4428 . + 0 ID=cds-WP_002848534.1;Parent=gene-HGK48_RS04135;Dbxref=GenBank:WP_002848534.1;Name=WP_002848534.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848534.1;locus_tag=HGK48_RS04135;product=BON domain-containing protein;protein_id=WP_002848534.1;transl_table=11 NZ_JAATTN010000059.1 RefSeq gene 4401 6866 . - . ID=gene-HGK48_RS04140;Name=HGK48_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04140 NZ_JAATTN010000059.1 Protein Homology CDS 4401 6866 . - 0 ID=cds-WP_002848525.1;Parent=gene-HGK48_RS04140;Dbxref=GenBank:WP_002848525.1;Name=WP_002848525.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848525.1;locus_tag=HGK48_RS04140;product=efflux RND transporter permease subunit;protein_id=WP_002848525.1;transl_table=11 NZ_JAATTN010000059.1 RefSeq gene 6866 7465 . - . ID=gene-HGK48_RS04145;Name=HGK48_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04145 NZ_JAATTN010000059.1 Protein Homology CDS 6866 7465 . - 0 ID=cds-WP_002848523.1;Parent=gene-HGK48_RS04145;Dbxref=GenBank:WP_002848523.1;Name=WP_002848523.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017319.6;locus_tag=HGK48_RS04145;product=Tgt2/MlaC family protein;protein_id=WP_002848523.1;transl_table=11 ##sequence-region NZ_JAATTN010000005.1 1 21410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000005.1 RefSeq region 1 21410 . + . ID=NZ_JAATTN010000005.1:1..21410;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000005.1 RefSeq gene 56 478 . - . ID=gene-HGK48_RS00615;Name=HGK48_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00615 NZ_JAATTN010000005.1 Protein Homology CDS 56 478 . - 0 ID=cds-WP_240944798.1;Parent=gene-HGK48_RS00615;Dbxref=GenBank:WP_240944798.1;Name=WP_240944798.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013077.6;locus_tag=HGK48_RS00615;product=nitroreductase family protein;protein_id=WP_240944798.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 488 1507 . - . ID=gene-HGK48_RS00620;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=HGK48_RS00620 NZ_JAATTN010000005.1 Protein Homology CDS 488 1507 . - 0 ID=cds-WP_372682838.1;Parent=gene-HGK48_RS00620;Dbxref=GenBank:WP_372682838.1;Name=WP_372682838.1;Ontology_term=GO:0001887,GO:0004756,GO:0005524;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA,ATP binding|0005524||IEA;go_process=selenium compound metabolic process|0001887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013553277.1;locus_tag=HGK48_RS00620;product=selenide%2C water dikinase SelD;protein_id=WP_372682838.1;transl_except=(pos:complement(1460..1462)%2Caa:Sec);transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 1500 2099 . - . ID=gene-HGK48_RS00625;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=HGK48_RS00625 NZ_JAATTN010000005.1 Protein Homology CDS 1500 2099 . - 0 ID=cds-WP_011731779.1;Parent=gene-HGK48_RS00625;Dbxref=GenBank:WP_011731779.1;Name=WP_011731779.1;gbkey=CDS;gene=yedF;inference=COORDINATES: protein motif:HMM:TIGR03527.1;locus_tag=HGK48_RS00625;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_011731779.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 2183 3316 . - . ID=gene-HGK48_RS00630;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=HGK48_RS00630 NZ_JAATTN010000005.1 Protein Homology CDS 2183 3316 . - 0 ID=cds-WP_002848463.1;Parent=gene-HGK48_RS00630;Dbxref=GenBank:WP_002848463.1;Name=WP_002848463.1;Ontology_term=GO:0045312,GO:0016831;gbkey=CDS;gene=nspC;go_function=carboxy-lyase activity|0016831||IEA;go_process=nor-spermidine biosynthetic process|0045312||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848463.1;locus_tag=HGK48_RS00630;product=carboxynorspermidine decarboxylase;protein_id=WP_002848463.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 3390 3935 . - . ID=gene-HGK48_RS00635;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=HGK48_RS00635 NZ_JAATTN010000005.1 Protein Homology CDS 3390 3935 . - 0 ID=cds-WP_002848461.1;Parent=gene-HGK48_RS00635;Dbxref=GenBank:WP_002848461.1;Name=WP_002848461.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848461.1;locus_tag=HGK48_RS00635;product=aminoacyl-tRNA hydrolase;protein_id=WP_002848461.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 3935 4471 . - . ID=gene-HGK48_RS00640;Name=HGK48_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00640 NZ_JAATTN010000005.1 Protein Homology CDS 3935 4471 . - 0 ID=cds-WP_002848460.1;Parent=gene-HGK48_RS00640;Dbxref=GenBank:WP_002848460.1;Name=WP_002848460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002861092.1;locus_tag=HGK48_RS00640;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_002848460.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 4532 5728 . - . ID=gene-HGK48_RS00645;Name=HGK48_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00645 NZ_JAATTN010000005.1 Protein Homology CDS 4532 5728 . - 0 ID=cds-WP_002848459.1;Parent=gene-HGK48_RS00645;Dbxref=GenBank:WP_002848459.1;Name=WP_002848459.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848459.1;locus_tag=HGK48_RS00645;product=type IV pilus twitching motility protein PilT;protein_id=WP_002848459.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 5738 6733 . - . ID=gene-HGK48_RS00650;Name=HGK48_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00650 NZ_JAATTN010000005.1 Protein Homology CDS 5738 6733 . - 0 ID=cds-WP_002848458.1;Parent=gene-HGK48_RS00650;Dbxref=GenBank:WP_002848458.1;Name=WP_002848458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848458.1;locus_tag=HGK48_RS00650;product=transaldolase;protein_id=WP_002848458.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 6746 7369 . - . ID=gene-HGK48_RS00655;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=HGK48_RS00655 NZ_JAATTN010000005.1 Protein Homology CDS 6746 7369 . - 0 ID=cds-WP_002848457.1;Parent=gene-HGK48_RS00655;Dbxref=GenBank:WP_002848457.1;Name=WP_002848457.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731778.1;locus_tag=HGK48_RS00655;product=phosphoserine phosphatase SerB;protein_id=WP_002848457.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 7378 7875 . - . ID=gene-HGK48_RS00660;Name=HGK48_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00660 NZ_JAATTN010000005.1 Protein Homology CDS 7378 7875 . - 0 ID=cds-WP_002848456.1;Parent=gene-HGK48_RS00660;Dbxref=GenBank:WP_002848456.1;Name=WP_002848456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950733.1;locus_tag=HGK48_RS00660;product=chemotaxis protein CheW;protein_id=WP_002848456.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 7885 10224 . - . ID=gene-HGK48_RS00665;Name=HGK48_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00665 NZ_JAATTN010000005.1 Protein Homology CDS 7885 10224 . - 0 ID=cds-WP_002848454.1;Parent=gene-HGK48_RS00665;Dbxref=GenBank:WP_002848454.1;Name=WP_002848454.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848454.1;locus_tag=HGK48_RS00665;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_002848454.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 10235 11191 . - . ID=gene-HGK48_RS00670;Name=HGK48_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00670 NZ_JAATTN010000005.1 Protein Homology CDS 10235 11191 . - 0 ID=cds-WP_002848452.1;Parent=gene-HGK48_RS00670;Dbxref=GenBank:WP_002848452.1;Name=WP_002848452.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012001425.1;locus_tag=HGK48_RS00670;product=chemotaxis protein;protein_id=WP_002848452.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 11184 11903 . - . ID=gene-HGK48_RS00675;Name=HGK48_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00675 NZ_JAATTN010000005.1 Protein Homology CDS 11184 11903 . - 0 ID=cds-WP_011731776.1;Parent=gene-HGK48_RS00675;Dbxref=GenBank:WP_011731776.1;Name=WP_011731776.1;Ontology_term=GO:0009245,GO:0008758,GO:0046872;gbkey=CDS;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,metal ion binding|0046872||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731776.1;locus_tag=HGK48_RS00675;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_011731776.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 11900 12928 . - . ID=gene-HGK48_RS00680;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=HGK48_RS00680 NZ_JAATTN010000005.1 Protein Homology CDS 11900 12928 . - 0 ID=cds-WP_002848450.1;Parent=gene-HGK48_RS00680;Dbxref=GenBank:WP_002848450.1;Name=WP_002848450.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731775.1;locus_tag=HGK48_RS00680;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_002848450.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 12937 13422 . - . ID=gene-HGK48_RS00685;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=HGK48_RS00685 NZ_JAATTN010000005.1 Protein Homology CDS 12937 13422 . - 0 ID=cds-WP_002848449.1;Parent=gene-HGK48_RS00685;Dbxref=GenBank:WP_002848449.1;Name=WP_002848449.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848449.1;locus_tag=HGK48_RS00685;product=transcription elongation factor GreA;protein_id=WP_002848449.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 13459 14490 . - . ID=gene-HGK48_RS00690;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=HGK48_RS00690 NZ_JAATTN010000005.1 Protein Homology CDS 13459 14490 . - 0 ID=cds-WP_002848448.1;Parent=gene-HGK48_RS00690;Dbxref=GenBank:WP_002848448.1;Name=WP_002848448.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848448.1;locus_tag=HGK48_RS00690;product=lipid-A-disaccharide synthase;protein_id=WP_002848448.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 14569 15339 . + . ID=gene-HGK48_RS00695;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=HGK48_RS00695 NZ_JAATTN010000005.1 Protein Homology CDS 14569 15339 . + 0 ID=cds-WP_002848447.1;Parent=gene-HGK48_RS00695;Dbxref=GenBank:WP_002848447.1;Name=WP_002848447.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848447.1;locus_tag=HGK48_RS00695;product=5'/3'-nucleotidase SurE;protein_id=WP_002848447.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 15342 15989 . + . ID=gene-HGK48_RS00700;Name=HGK48_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00700 NZ_JAATTN010000005.1 Protein Homology CDS 15342 15989 . + 0 ID=cds-WP_002848446.1;Parent=gene-HGK48_RS00700;Dbxref=GenBank:WP_002848446.1;Name=WP_002848446.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848446.1;locus_tag=HGK48_RS00700;product=ThiF family adenylyltransferase;protein_id=WP_002848446.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 15982 16866 . + . ID=gene-HGK48_RS00705;Name=HGK48_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00705 NZ_JAATTN010000005.1 Protein Homology CDS 15982 16866 . + 0 ID=cds-WP_002848445.1;Parent=gene-HGK48_RS00705;Dbxref=GenBank:WP_002848445.1;Name=WP_002848445.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: protein motif:HMM:NF019976.6;locus_tag=HGK48_RS00705;product=nuclease-related domain-containing protein;protein_id=WP_002848445.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 16893 17375 . - . ID=gene-HGK48_RS11495;Name=HGK48_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11495 NZ_JAATTN010000005.1 Protein Homology CDS 16893 17375 . - 0 ID=cds-WP_392389512.1;Parent=gene-HGK48_RS11495;Dbxref=GenBank:WP_392389512.1;Name=WP_392389512.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=HGK48_RS11495;product=methyl-accepting chemotaxis protein;protein_id=WP_392389512.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq pseudogene 17475 18095 . - . ID=gene-HGK48_RS11500;Name=cetZ;gbkey=Gene;gene=cetZ;gene_biotype=pseudogene;locus_tag=HGK48_RS11500;partial=true;pseudo=true;start_range=.,17475 NZ_JAATTN010000005.1 Protein Homology CDS 17475 18095 . - 0 ID=cds-HGK48_RS11500;Parent=gene-HGK48_RS11500;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=cetZ;inference=COORDINATES: protein motif:HMM:NF020037.6;locus_tag=HGK48_RS11500;partial=true;product=energy taxis response protein CetZ;pseudo=true;start_range=.,17475;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 18282 18704 . - . ID=gene-HGK48_RS00715;Name=HGK48_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00715 NZ_JAATTN010000005.1 Protein Homology CDS 18282 18704 . - 0 ID=cds-WP_010400448.1;Parent=gene-HGK48_RS00715;Dbxref=GenBank:WP_010400448.1;Name=WP_010400448.1;Ontology_term=GO:0003725;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002831033.1;locus_tag=HGK48_RS00715;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=WP_010400448.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 18701 19540 . - . ID=gene-HGK48_RS00720;Name=HGK48_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00720 NZ_JAATTN010000005.1 Protein Homology CDS 18701 19540 . - 0 ID=cds-WP_002848443.1;Parent=gene-HGK48_RS00720;Dbxref=GenBank:WP_002848443.1;Name=WP_002848443.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013857.6;locus_tag=HGK48_RS00720;product=beta/alpha barrel domain-containing protein;protein_id=WP_002848443.1;transl_table=11 NZ_JAATTN010000005.1 RefSeq gene 19537 21410 . - . ID=gene-HGK48_RS00725;Name=carB;end_range=21410,.;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=HGK48_RS00725;partial=true NZ_JAATTN010000005.1 Protein Homology CDS 19537 21410 . - 2 ID=cds-WP_168236626.1;Parent=gene-HGK48_RS00725;Dbxref=GenBank:WP_168236626.1;Name=WP_168236626.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;end_range=21410,.;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009649467.1;locus_tag=HGK48_RS00725;partial=true;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_168236626.1;transl_table=11 ##sequence-region NZ_JAATTN010000060.1 1 7439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000060.1 RefSeq region 1 7439 . + . ID=NZ_JAATTN010000060.1:1..7439;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000060.1 RefSeq gene 1 1287 . - . ID=gene-HGK48_RS04150;Name=HGK48_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04150;partial=true;start_range=.,1 NZ_JAATTN010000060.1 Protein Homology CDS 1 1287 . - 0 ID=cds-WP_168236704.1;Parent=gene-HGK48_RS04150;Dbxref=GenBank:WP_168236704.1;Name=WP_168236704.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012570.6;locus_tag=HGK48_RS04150;partial=true;product=dynamin family protein;protein_id=WP_168236704.1;start_range=.,1;transl_table=11 NZ_JAATTN010000060.1 RefSeq gene 1281 3359 . - . ID=gene-HGK48_RS04155;Name=HGK48_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04155 NZ_JAATTN010000060.1 Protein Homology CDS 1281 3359 . - 0 ID=cds-WP_002848662.1;Parent=gene-HGK48_RS04155;Dbxref=GenBank:WP_002848662.1;Name=WP_002848662.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012239.6;locus_tag=HGK48_RS04155;product=dynamin family protein;protein_id=WP_002848662.1;transl_table=11 NZ_JAATTN010000060.1 RefSeq gene 3509 5317 . - . ID=gene-HGK48_RS04160;Name=HGK48_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04160 NZ_JAATTN010000060.1 Protein Homology CDS 3509 5317 . - 0 ID=cds-WP_011731817.1;Parent=gene-HGK48_RS04160;Dbxref=GenBank:WP_011731817.1;Name=WP_011731817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731817.1;locus_tag=HGK48_RS04160;product=aryl-sulfate sulfotransferase;protein_id=WP_011731817.1;transl_table=11 NZ_JAATTN010000060.1 RefSeq gene 5399 7189 . - . ID=gene-HGK48_RS04165;Name=HGK48_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04165 NZ_JAATTN010000060.1 GeneMarkS-2+ CDS 5399 7189 . - 0 ID=cds-WP_002848656.1;Parent=gene-HGK48_RS04165;Dbxref=GenBank:WP_002848656.1;Name=WP_002848656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04165;product=porin family protein;protein_id=WP_002848656.1;transl_table=11 NZ_JAATTN010000060.1 RefSeq pseudogene 7357 7439 . - . ID=gene-HGK48_RS04170;Name=HGK48_RS04170;end_range=7439,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS04170;partial=true;pseudo=true NZ_JAATTN010000060.1 Protein Homology CDS 7357 7439 . - 2 ID=cds-HGK48_RS04170;Parent=gene-HGK48_RS04170;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848655.1;locus_tag=HGK48_RS04170;partial=true;product=protein-disulfide oxidoreductase DsbI;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000061.1 1 7434 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000061.1 RefSeq region 1 7434 . + . ID=NZ_JAATTN010000061.1:1..7434;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000061.1 RefSeq gene 1 795 . + . ID=gene-HGK48_RS04175;Name=HGK48_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04175;partial=true;start_range=.,1 NZ_JAATTN010000061.1 Protein Homology CDS 1 795 . + 0 ID=cds-WP_168236705.1;Parent=gene-HGK48_RS04175;Dbxref=GenBank:WP_168236705.1;Name=WP_168236705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009493535.1;locus_tag=HGK48_RS04175;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_168236705.1;start_range=.,1;transl_table=11 NZ_JAATTN010000061.1 RefSeq gene 955 2529 . + . ID=gene-HGK48_RS04180;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=HGK48_RS04180 NZ_JAATTN010000061.1 Protein Homology CDS 955 2529 . + 0 ID=cds-WP_024305386.1;Parent=gene-HGK48_RS04180;Dbxref=GenBank:WP_024305386.1;Name=WP_024305386.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002863221.1;locus_tag=HGK48_RS04180;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_024305386.1;transl_table=11 NZ_JAATTN010000061.1 RefSeq gene 2819 4207 . + . ID=gene-HGK48_RS04185;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=HGK48_RS04185 NZ_JAATTN010000061.1 Protein Homology CDS 2819 4207 . + 0 ID=cds-WP_002850086.1;Parent=gene-HGK48_RS04185;Dbxref=GenBank:WP_002850086.1;Name=WP_002850086.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850086.1;locus_tag=HGK48_RS04185;product=argininosuccinate lyase;protein_id=WP_002850086.1;transl_table=11 NZ_JAATTN010000061.1 RefSeq gene 4375 4608 . + . ID=gene-HGK48_RS04190;Name=HGK48_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04190 NZ_JAATTN010000061.1 Protein Homology CDS 4375 4608 . + 0 ID=cds-WP_002850087.1;Parent=gene-HGK48_RS04190;Dbxref=GenBank:WP_002850087.1;Name=WP_002850087.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: protein motif:HMM:NF015956.6;locus_tag=HGK48_RS04190;product=FeoA family protein;protein_id=WP_002850087.1;transl_table=11 NZ_JAATTN010000061.1 RefSeq gene 4696 6717 . + . ID=gene-HGK48_RS04195;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=HGK48_RS04195 NZ_JAATTN010000061.1 Protein Homology CDS 4696 6717 . + 0 ID=cds-WP_316242794.1;Parent=gene-HGK48_RS04195;Dbxref=GenBank:WP_316242794.1;Name=WP_316242794.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: protein motif:HMM:TIGR00437.1;locus_tag=HGK48_RS04195;product=ferrous iron transport protein B;protein_id=WP_316242794.1;transl_table=11 NZ_JAATTN010000061.1 RefSeq gene 6783 7406 . + . ID=gene-HGK48_RS04200;Name=HGK48_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04200 NZ_JAATTN010000061.1 Protein Homology CDS 6783 7406 . + 0 ID=cds-WP_002850091.1;Parent=gene-HGK48_RS04200;Dbxref=GenBank:WP_002850091.1;Name=WP_002850091.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: protein motif:HMM:NF014573.6;locus_tag=HGK48_RS04200;product=FMN-dependent NADH-azoreductase;protein_id=WP_002850091.1;transl_table=11 ##sequence-region NZ_JAATTN010000062.1 1 7423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000062.1 RefSeq region 1 7423 . + . ID=NZ_JAATTN010000062.1:1..7423;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000062.1 RefSeq gene 170 1147 . + . ID=gene-HGK48_RS04205;Name=HGK48_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04205 NZ_JAATTN010000062.1 Protein Homology CDS 170 1147 . + 0 ID=cds-WP_002849411.1;Parent=gene-HGK48_RS04205;Dbxref=GenBank:WP_002849411.1;Name=WP_002849411.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849411.1;locus_tag=HGK48_RS04205;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_002849411.1;transl_table=11 NZ_JAATTN010000062.1 RefSeq gene 1144 1587 . + . ID=gene-HGK48_RS04210;Name=HGK48_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04210 NZ_JAATTN010000062.1 Protein Homology CDS 1144 1587 . + 0 ID=cds-WP_002849412.1;Parent=gene-HGK48_RS04210;Dbxref=GenBank:WP_002849412.1;Name=WP_002849412.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: protein motif:HMM:NF018979.6;locus_tag=HGK48_RS04210;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_002849412.1;transl_table=11 NZ_JAATTN010000062.1 RefSeq gene 1780 2121 . + . ID=gene-HGK48_RS11075;Name=HGK48_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11075 NZ_JAATTN010000062.1 Protein Homology CDS 1780 2121 . + 0 ID=cds-WP_024305505.1;Parent=gene-HGK48_RS11075;Dbxref=GenBank:WP_024305505.1;Name=WP_024305505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014073.6;locus_tag=HGK48_RS11075;product=tripartite tricarboxylate transporter permease;protein_id=WP_024305505.1;transl_table=11 NZ_JAATTN010000062.1 RefSeq gene 2218 2466 . + . ID=gene-HGK48_RS11080;Name=HGK48_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11080 NZ_JAATTN010000062.1 GeneMarkS-2+ CDS 2218 2466 . + 0 ID=cds-WP_002849420.1;Parent=gene-HGK48_RS11080;Dbxref=GenBank:WP_002849420.1;Name=WP_002849420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11080;product=hypothetical protein;protein_id=WP_002849420.1;transl_table=11 NZ_JAATTN010000062.1 RefSeq gene 2539 3090 . - . ID=gene-HGK48_RS04220;Name=HGK48_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04220 NZ_JAATTN010000062.1 Protein Homology CDS 2539 3090 . - 0 ID=cds-WP_002849421.1;Parent=gene-HGK48_RS04220;Dbxref=GenBank:WP_002849421.1;Name=WP_002849421.1;Ontology_term=GO:0016903;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849421.1;locus_tag=HGK48_RS04220;product=2-oxoacid:acceptor oxidoreductase family protein;protein_id=WP_002849421.1;transl_table=11 NZ_JAATTN010000062.1 RefSeq gene 3087 3932 . - . ID=gene-HGK48_RS04225;Name=HGK48_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04225 NZ_JAATTN010000062.1 Protein Homology CDS 3087 3932 . - 0 ID=cds-WP_002849422.1;Parent=gene-HGK48_RS04225;Dbxref=GenBank:WP_002849422.1;Name=WP_002849422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002947889.1;locus_tag=HGK48_RS04225;product=2-oxoglutarate ferredoxin oxidoreductase subunit beta;protein_id=WP_002849422.1;transl_table=11 NZ_JAATTN010000062.1 RefSeq gene 3934 5055 . - . ID=gene-HGK48_RS04230;Name=HGK48_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04230 NZ_JAATTN010000062.1 Protein Homology CDS 3934 5055 . - 0 ID=cds-WP_002849423.1;Parent=gene-HGK48_RS04230;Dbxref=GenBank:WP_002849423.1;Name=WP_002849423.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849423.1;locus_tag=HGK48_RS04230;product=2-oxoglutarate synthase subunit alpha;protein_id=WP_002849423.1;transl_table=11 NZ_JAATTN010000062.1 RefSeq gene 5067 5375 . - . ID=gene-HGK48_RS04235;Name=HGK48_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04235 NZ_JAATTN010000062.1 Protein Homology CDS 5067 5375 . - 0 ID=cds-WP_024305507.1;Parent=gene-HGK48_RS04235;Dbxref=GenBank:WP_024305507.1;Name=WP_024305507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002862773.1;locus_tag=HGK48_RS04235;product=4Fe-4S binding protein;protein_id=WP_024305507.1;transl_table=11 NZ_JAATTN010000062.1 RefSeq gene 5385 6257 . - . ID=gene-HGK48_RS04240;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=HGK48_RS04240 NZ_JAATTN010000062.1 Protein Homology CDS 5385 6257 . - 0 ID=cds-WP_002849426.1;Parent=gene-HGK48_RS04240;Dbxref=GenBank:WP_002849426.1;Name=WP_002849426.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002776090.1;locus_tag=HGK48_RS04240;product=succinate--CoA ligase subunit alpha;protein_id=WP_002849426.1;transl_table=11 NZ_JAATTN010000062.1 RefSeq gene 6267 7423 . - . ID=gene-HGK48_RS04245;Name=sucC;end_range=7423,.;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=HGK48_RS04245;partial=true NZ_JAATTN010000062.1 Protein Homology CDS 6267 7423 . - 2 ID=cds-WP_168236706.1;Parent=gene-HGK48_RS04245;Dbxref=GenBank:WP_168236706.1;Name=WP_168236706.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;end_range=7423,.;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849429.1;locus_tag=HGK48_RS04245;partial=true;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_168236706.1;transl_table=11 ##sequence-region NZ_JAATTN010000063.1 1 7394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000063.1 RefSeq region 1 7394 . + . ID=NZ_JAATTN010000063.1:1..7394;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000063.1 RefSeq gene 2 1174 . + . ID=gene-HGK48_RS04250;Name=HGK48_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04250 NZ_JAATTN010000063.1 Protein Homology CDS 2 1174 . + 0 ID=cds-WP_029662438.1;Parent=gene-HGK48_RS04250;Dbxref=GenBank:WP_029662438.1;Name=WP_029662438.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848904.1;locus_tag=HGK48_RS04250;product=M48 family metallopeptidase;protein_id=WP_029662438.1;transl_table=11 NZ_JAATTN010000063.1 RefSeq gene 1161 1946 . + . ID=gene-HGK48_RS04255;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=HGK48_RS04255 NZ_JAATTN010000063.1 Protein Homology CDS 1161 1946 . + 0 ID=cds-WP_002848910.1;Parent=gene-HGK48_RS04255;Dbxref=GenBank:WP_002848910.1;Name=WP_002848910.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731863.1;locus_tag=HGK48_RS04255;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_002848910.1;transl_table=11 NZ_JAATTN010000063.1 RefSeq gene 1957 2436 . + . ID=gene-HGK48_RS04260;Name=HGK48_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04260 NZ_JAATTN010000063.1 Protein Homology CDS 1957 2436 . + 0 ID=cds-WP_002848912.1;Parent=gene-HGK48_RS04260;Dbxref=GenBank:WP_002848912.1;Name=WP_002848912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848912.1;locus_tag=HGK48_RS04260;product=DUF4149 domain-containing protein;protein_id=WP_002848912.1;transl_table=11 NZ_JAATTN010000063.1 RefSeq gene 2433 2783 . - . ID=gene-HGK48_RS04265;Name=HGK48_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04265 NZ_JAATTN010000063.1 GeneMarkS-2+ CDS 2433 2783 . - 0 ID=cds-WP_002848914.1;Parent=gene-HGK48_RS04265;Dbxref=GenBank:WP_002848914.1;Name=WP_002848914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04265;product=hypothetical protein;protein_id=WP_002848914.1;transl_table=11 NZ_JAATTN010000063.1 RefSeq gene 2889 3284 . + . ID=gene-HGK48_RS04270;Name=HGK48_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04270 NZ_JAATTN010000063.1 Protein Homology CDS 2889 3284 . + 0 ID=cds-WP_002848915.1;Parent=gene-HGK48_RS04270;Dbxref=GenBank:WP_002848915.1;Name=WP_002848915.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848915.1;locus_tag=HGK48_RS04270;product=YbgC/FadM family acyl-CoA thioesterase;protein_id=WP_002848915.1;transl_table=11 NZ_JAATTN010000063.1 RefSeq gene 3224 4471 . - . ID=gene-HGK48_RS04275;Name=HGK48_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04275 NZ_JAATTN010000063.1 GeneMarkS-2+ CDS 3224 4471 . - 0 ID=cds-WP_002848916.1;Parent=gene-HGK48_RS04275;Dbxref=GenBank:WP_002848916.1;Name=WP_002848916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04275;product=hypothetical protein;protein_id=WP_002848916.1;transl_table=11 NZ_JAATTN010000063.1 RefSeq gene 4468 5109 . - . ID=gene-HGK48_RS04280;Name=HGK48_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04280 NZ_JAATTN010000063.1 Protein Homology CDS 4468 5109 . - 0 ID=cds-WP_011731864.1;Parent=gene-HGK48_RS04280;Dbxref=GenBank:WP_011731864.1;Name=WP_011731864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731864.1;locus_tag=HGK48_RS04280;product=uracil-DNA glycosylase family protein;protein_id=WP_011731864.1;transl_table=11 NZ_JAATTN010000063.1 RefSeq gene 5149 5622 . - . ID=gene-HGK48_RS04285;Name=HGK48_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04285 NZ_JAATTN010000063.1 Protein Homology CDS 5149 5622 . - 0 ID=cds-WP_002848918.1;Parent=gene-HGK48_RS04285;Dbxref=GenBank:WP_002848918.1;Name=WP_002848918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848918.1;locus_tag=HGK48_RS04285;product=GNAT family N-acetyltransferase;protein_id=WP_002848918.1;transl_table=11 NZ_JAATTN010000063.1 RefSeq gene 5689 6972 . - . ID=gene-HGK48_RS04290;Name=HGK48_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04290 NZ_JAATTN010000063.1 Protein Homology CDS 5689 6972 . - 0 ID=cds-WP_002848919.1;Parent=gene-HGK48_RS04290;Dbxref=GenBank:WP_002848919.1;Name=WP_002848919.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848919.1;locus_tag=HGK48_RS04290;product=ammonium transporter;protein_id=WP_002848919.1;transl_table=11 NZ_JAATTN010000063.1 RefSeq gene 6982 7320 . - . ID=gene-HGK48_RS04295;Name=HGK48_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04295 NZ_JAATTN010000063.1 Protein Homology CDS 6982 7320 . - 0 ID=cds-WP_002848921.1;Parent=gene-HGK48_RS04295;Dbxref=GenBank:WP_002848921.1;Name=WP_002848921.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848921.1;locus_tag=HGK48_RS04295;product=P-II family nitrogen regulator;protein_id=WP_002848921.1;transl_table=11 ##sequence-region NZ_JAATTN010000064.1 1 7389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000064.1 RefSeq region 1 7389 . + . ID=NZ_JAATTN010000064.1:1..7389;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000064.1 RefSeq gene 139 930 . + . ID=gene-HGK48_RS04300;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=HGK48_RS04300 NZ_JAATTN010000064.1 Protein Homology CDS 139 930 . + 0 ID=cds-WP_002849517.1;Parent=gene-HGK48_RS04300;Dbxref=GenBank:WP_002849517.1;Name=WP_002849517.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: protein motif:HMM:TIGR00097.1;locus_tag=HGK48_RS04300;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_002849517.1;transl_table=11 NZ_JAATTN010000064.1 RefSeq gene 989 1630 . - . ID=gene-HGK48_RS04305;Name=HGK48_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04305 NZ_JAATTN010000064.1 Protein Homology CDS 989 1630 . - 0 ID=cds-WP_168236707.1;Parent=gene-HGK48_RS04305;Dbxref=GenBank:WP_168236707.1;Name=WP_168236707.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849515.1;locus_tag=HGK48_RS04305;product=methionine ABC transporter permease;protein_id=WP_168236707.1;transl_table=11 NZ_JAATTN010000064.1 RefSeq gene 1627 2595 . - . ID=gene-HGK48_RS04310;Name=HGK48_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04310 NZ_JAATTN010000064.1 Protein Homology CDS 1627 2595 . - 0 ID=cds-WP_002849512.1;Parent=gene-HGK48_RS04310;Dbxref=GenBank:WP_002849512.1;Name=WP_002849512.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849512.1;locus_tag=HGK48_RS04310;product=methionine ABC transporter ATP-binding protein;protein_id=WP_002849512.1;transl_table=11 NZ_JAATTN010000064.1 RefSeq gene 2592 5213 . - . ID=gene-HGK48_RS04315;Name=HGK48_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04315 NZ_JAATTN010000064.1 Protein Homology CDS 2592 5213 . - 0 ID=cds-WP_011732021.1;Parent=gene-HGK48_RS04315;Dbxref=GenBank:WP_011732021.1;Name=WP_011732021.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732021.1;locus_tag=HGK48_RS04315;product=valine--tRNA ligase;protein_id=WP_011732021.1;transl_table=11 NZ_JAATTN010000064.1 RefSeq gene 5388 6785 . + . ID=gene-HGK48_RS04320;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=HGK48_RS04320 NZ_JAATTN010000064.1 Protein Homology CDS 5388 6785 . + 0 ID=cds-WP_002849511.1;Parent=gene-HGK48_RS04320;Dbxref=GenBank:WP_002849511.1;Name=WP_002849511.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009494349.1;locus_tag=HGK48_RS04320;product=class II fumarate hydratase;protein_id=WP_002849511.1;transl_table=11 NZ_JAATTN010000064.1 RefSeq gene 7193 7389 . - . ID=gene-HGK48_RS04325;Name=HGK48_RS04325;end_range=7389,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04325;partial=true NZ_JAATTN010000064.1 Protein Homology CDS 7193 7389 . - 2 ID=cds-WP_206120296.1;Parent=gene-HGK48_RS04325;Dbxref=GenBank:WP_206120296.1;Name=WP_206120296.1;Ontology_term=GO:0006508,GO:0008236;end_range=7389,.;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012920.6;locus_tag=HGK48_RS04325;partial=true;product=S24 family peptidase;protein_id=WP_206120296.1;transl_table=11 ##sequence-region NZ_JAATTN010000065.1 1 7372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000065.1 RefSeq region 1 7372 . + . ID=NZ_JAATTN010000065.1:1..7372;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000065.1 RefSeq gene 126 1196 . + . ID=gene-HGK48_RS04330;Name=HGK48_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04330 NZ_JAATTN010000065.1 Protein Homology CDS 126 1196 . + 0 ID=cds-WP_002850687.1;Parent=gene-HGK48_RS04330;Dbxref=GenBank:WP_002850687.1;Name=WP_002850687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011139957.1;locus_tag=HGK48_RS04330;product=DUF354 domain-containing protein;protein_id=WP_002850687.1;transl_table=11 NZ_JAATTN010000065.1 RefSeq gene 1183 1836 . + . ID=gene-HGK48_RS04335;Name=HGK48_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04335 NZ_JAATTN010000065.1 Protein Homology CDS 1183 1836 . + 0 ID=cds-WP_002850689.1;Parent=gene-HGK48_RS04335;Dbxref=GenBank:WP_002850689.1;Name=WP_002850689.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF013742.6;locus_tag=HGK48_RS04335;product=O-methyltransferase;protein_id=WP_002850689.1;transl_table=11 NZ_JAATTN010000065.1 RefSeq gene 1827 3215 . + . ID=gene-HGK48_RS04340;Name=HGK48_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04340 NZ_JAATTN010000065.1 GeneMarkS-2+ CDS 1827 3215 . + 0 ID=cds-WP_011732281.1;Parent=gene-HGK48_RS04340;Dbxref=GenBank:WP_011732281.1;Name=WP_011732281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04340;product=hypothetical protein;protein_id=WP_011732281.1;transl_table=11 NZ_JAATTN010000065.1 RefSeq gene 3208 4653 . + . ID=gene-HGK48_RS04345;Name=HGK48_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04345 NZ_JAATTN010000065.1 GeneMarkS-2+ CDS 3208 4653 . + 0 ID=cds-WP_011732282.1;Parent=gene-HGK48_RS04345;Dbxref=GenBank:WP_011732282.1;Name=WP_011732282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04345;product=hypothetical protein;protein_id=WP_011732282.1;transl_table=11 NZ_JAATTN010000065.1 RefSeq gene 4650 4814 . + . ID=gene-HGK48_RS04350;Name=HGK48_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04350 NZ_JAATTN010000065.1 Protein Homology CDS 4650 4814 . + 0 ID=cds-WP_167544650.1;Parent=gene-HGK48_RS04350;Dbxref=GenBank:WP_167544650.1;Name=WP_167544650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732286.1;locus_tag=HGK48_RS04350;product=hypothetical protein;protein_id=WP_167544650.1;transl_table=11 NZ_JAATTN010000065.1 RefSeq gene 4811 6046 . + . ID=gene-HGK48_RS04355;Name=HGK48_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04355 NZ_JAATTN010000065.1 GeneMarkS-2+ CDS 4811 6046 . + 0 ID=cds-WP_035169340.1;Parent=gene-HGK48_RS04355;Dbxref=GenBank:WP_035169340.1;Name=WP_035169340.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04355;product=hypothetical protein;protein_id=WP_035169340.1;transl_table=11 NZ_JAATTN010000065.1 RefSeq gene 6057 7372 . + . ID=gene-HGK48_RS04360;Name=HGK48_RS04360;end_range=7372,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04360;partial=true NZ_JAATTN010000065.1 GeneMarkS-2+ CDS 6057 7372 . + 0 ID=cds-WP_168236708.1;Parent=gene-HGK48_RS04360;Dbxref=GenBank:WP_168236708.1;Name=WP_168236708.1;end_range=7372,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04360;partial=true;product=SGNH/GDSL hydrolase family protein;protein_id=WP_168236708.1;transl_table=11 ##sequence-region NZ_JAATTN010000066.1 1 7361 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000066.1 RefSeq region 1 7361 . + . ID=NZ_JAATTN010000066.1:1..7361;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000066.1 RefSeq gene 70 990 . - . ID=gene-HGK48_RS04365;Name=HGK48_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04365 NZ_JAATTN010000066.1 GeneMarkS-2+ CDS 70 990 . - 0 ID=cds-WP_025370404.1;Parent=gene-HGK48_RS04365;Dbxref=GenBank:WP_025370404.1;Name=WP_025370404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04365;product=hypothetical protein;protein_id=WP_025370404.1;transl_table=11 NZ_JAATTN010000066.1 RefSeq gene 1177 1308 . + . ID=gene-HGK48_RS11365;Name=HGK48_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11365 NZ_JAATTN010000066.1 GeneMarkS-2+ CDS 1177 1308 . + 0 ID=cds-WP_002850786.1;Parent=gene-HGK48_RS11365;Dbxref=GenBank:WP_002850786.1;Name=WP_002850786.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11365;product=hypothetical protein;protein_id=WP_002850786.1;transl_table=11 NZ_JAATTN010000066.1 RefSeq gene 2159 2434 . - . ID=gene-HGK48_RS04370;Name=HGK48_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04370 NZ_JAATTN010000066.1 Protein Homology CDS 2159 2434 . - 0 ID=cds-WP_002850794.1;Parent=gene-HGK48_RS04370;Dbxref=GenBank:WP_002850794.1;Name=WP_002850794.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850794.1;locus_tag=HGK48_RS04370;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_002850794.1;transl_table=11 NZ_JAATTN010000066.1 RefSeq gene 2428 2670 . - . ID=gene-HGK48_RS04375;Name=HGK48_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04375 NZ_JAATTN010000066.1 GeneMarkS-2+ CDS 2428 2670 . - 0 ID=cds-WP_002850796.1;Parent=gene-HGK48_RS04375;Dbxref=GenBank:WP_002850796.1;Name=WP_002850796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04375;product=hypothetical protein;protein_id=WP_002850796.1;transl_table=11 NZ_JAATTN010000066.1 RefSeq gene 2844 3155 . - . ID=gene-HGK48_RS04380;Name=HGK48_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04380 NZ_JAATTN010000066.1 GeneMarkS-2+ CDS 2844 3155 . - 0 ID=cds-WP_002850798.1;Parent=gene-HGK48_RS04380;Dbxref=GenBank:WP_002850798.1;Name=WP_002850798.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04380;product=hypothetical protein;protein_id=WP_002850798.1;transl_table=11 NZ_JAATTN010000066.1 RefSeq gene 4223 5002 . - . ID=gene-HGK48_RS04385;Name=HGK48_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04385 NZ_JAATTN010000066.1 GeneMarkS-2+ CDS 4223 5002 . - 0 ID=cds-WP_002850799.1;Parent=gene-HGK48_RS04385;Dbxref=GenBank:WP_002850799.1;Name=WP_002850799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04385;product=hypothetical protein;protein_id=WP_002850799.1;transl_table=11 NZ_JAATTN010000066.1 RefSeq gene 5085 5336 . - . ID=gene-HGK48_RS04390;Name=HGK48_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04390 NZ_JAATTN010000066.1 GeneMarkS-2+ CDS 5085 5336 . - 0 ID=cds-WP_002850800.1;Parent=gene-HGK48_RS04390;Dbxref=GenBank:WP_002850800.1;Name=WP_002850800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04390;product=hypothetical protein;protein_id=WP_002850800.1;transl_table=11 NZ_JAATTN010000066.1 RefSeq gene 5336 5551 . - . ID=gene-HGK48_RS04395;Name=HGK48_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04395 NZ_JAATTN010000066.1 GeneMarkS-2+ CDS 5336 5551 . - 0 ID=cds-WP_002850801.1;Parent=gene-HGK48_RS04395;Dbxref=GenBank:WP_002850801.1;Name=WP_002850801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04395;product=MerR family transcriptional regulator;protein_id=WP_002850801.1;transl_table=11 NZ_JAATTN010000066.1 RefSeq gene 5562 6800 . - . ID=gene-HGK48_RS04400;Name=HGK48_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04400 NZ_JAATTN010000066.1 Protein Homology CDS 5562 6800 . - 0 ID=cds-WP_002850802.1;Parent=gene-HGK48_RS04400;Dbxref=GenBank:WP_002850802.1;Name=WP_002850802.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=HGK48_RS04400;product=tyrosine-type recombinase/integrase;protein_id=WP_002850802.1;transl_table=11 NZ_JAATTN010000066.1 RefSeq gene 6932 7159 . - . ID=gene-HGK48_RS04405;Name=HGK48_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04405 NZ_JAATTN010000066.1 GeneMarkS-2+ CDS 6932 7159 . - 0 ID=cds-WP_011732317.1;Parent=gene-HGK48_RS04405;Dbxref=GenBank:WP_011732317.1;Name=WP_011732317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04405;product=hypothetical protein;protein_id=WP_011732317.1;transl_table=11 ##sequence-region NZ_JAATTN010000067.1 1 7178 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000067.1 RefSeq region 1 7178 . + . ID=NZ_JAATTN010000067.1:1..7178;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000067.1 RefSeq pseudogene 1 228 . + . ID=gene-HGK48_RS04410;Name=HGK48_RS04410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS04410;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000067.1 Protein Homology CDS 1 228 . + 0 ID=cds-HGK48_RS04410;Parent=gene-HGK48_RS04410;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849360.1;locus_tag=HGK48_RS04410;partial=true;product=3'-5' exonuclease;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000067.1 RefSeq gene 221 2053 . - . ID=gene-HGK48_RS04415;Name=HGK48_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04415 NZ_JAATTN010000067.1 Protein Homology CDS 221 2053 . - 0 ID=cds-WP_024305232.1;Parent=gene-HGK48_RS04415;Dbxref=GenBank:WP_024305232.1;Name=WP_024305232.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002776439.1;locus_tag=HGK48_RS04415;product=primosomal protein N';protein_id=WP_024305232.1;transl_table=11 NZ_JAATTN010000067.1 RefSeq gene 2061 2471 . - . ID=gene-HGK48_RS04420;Name=HGK48_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04420 NZ_JAATTN010000067.1 Protein Homology CDS 2061 2471 . - 0 ID=cds-WP_002849361.1;Parent=gene-HGK48_RS04420;Dbxref=GenBank:WP_002849361.1;Name=WP_002849361.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=HGK48_RS04420;product=type II secretion system protein;protein_id=WP_002849361.1;transl_table=11 NZ_JAATTN010000067.1 RefSeq gene 2498 3259 . - . ID=gene-HGK48_RS04425;Name=HGK48_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04425 NZ_JAATTN010000067.1 GeneMarkS-2+ CDS 2498 3259 . - 0 ID=cds-WP_002849362.1;Parent=gene-HGK48_RS04425;Dbxref=GenBank:WP_002849362.1;Name=WP_002849362.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04425;product=hypothetical protein;protein_id=WP_002849362.1;transl_table=11 NZ_JAATTN010000067.1 RefSeq gene 3256 3879 . - . ID=gene-HGK48_RS04430;Name=HGK48_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04430 NZ_JAATTN010000067.1 Protein Homology CDS 3256 3879 . - 0 ID=cds-WP_002849363.1;Parent=gene-HGK48_RS04430;Dbxref=GenBank:WP_002849363.1;Name=WP_002849363.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849363.1;locus_tag=HGK48_RS04430;product=type II secretion system protein;protein_id=WP_002849363.1;transl_table=11 NZ_JAATTN010000067.1 RefSeq gene 3899 4408 . - . ID=gene-HGK48_RS11370;Name=HGK48_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11370 NZ_JAATTN010000067.1 Protein Homology CDS 3899 4408 . - 0 ID=cds-WP_050981951.1;Parent=gene-HGK48_RS11370;Dbxref=GenBank:WP_050981951.1;Name=WP_050981951.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018137350.1;locus_tag=HGK48_RS11370;product=type II secretion system protein;protein_id=WP_050981951.1;transl_table=11 NZ_JAATTN010000067.1 RefSeq gene 4495 4719 . - . ID=gene-HGK48_RS04440;Name=HGK48_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04440 NZ_JAATTN010000067.1 GeneMarkS-2+ CDS 4495 4719 . - 0 ID=cds-WP_002849366.1;Parent=gene-HGK48_RS04440;Dbxref=GenBank:WP_002849366.1;Name=WP_002849366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04440;product=hypothetical protein;protein_id=WP_002849366.1;transl_table=11 NZ_JAATTN010000067.1 RefSeq gene 4716 4949 . - . ID=gene-HGK48_RS04445;Name=HGK48_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04445 NZ_JAATTN010000067.1 Protein Homology CDS 4716 4949 . - 0 ID=cds-WP_002849367.1;Parent=gene-HGK48_RS04445;Dbxref=GenBank:WP_002849367.1;Name=WP_002849367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849367.1;locus_tag=HGK48_RS04445;product=hypothetical protein;protein_id=WP_002849367.1;transl_table=11 NZ_JAATTN010000067.1 RefSeq gene 5140 7116 . + . ID=gene-HGK48_RS04450;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=HGK48_RS04450 NZ_JAATTN010000067.1 Protein Homology CDS 5140 7116 . + 0 ID=cds-WP_002849372.1;Parent=gene-HGK48_RS04450;Dbxref=GenBank:WP_002849372.1;Name=WP_002849372.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849372.1;locus_tag=HGK48_RS04450;product=excinuclease ABC subunit UvrB;protein_id=WP_002849372.1;transl_table=11 ##sequence-region NZ_JAATTN010000068.1 1 7015 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000068.1 RefSeq region 1 7015 . + . ID=NZ_JAATTN010000068.1:1..7015;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000068.1 RefSeq gene 182 343 . - . ID=gene-HGK48_RS04455;Name=HGK48_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04455 NZ_JAATTN010000068.1 GeneMarkS-2+ CDS 182 343 . - 0 ID=cds-WP_010404357.1;Parent=gene-HGK48_RS04455;Dbxref=GenBank:WP_010404357.1;Name=WP_010404357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04455;product=hypothetical protein;protein_id=WP_010404357.1;transl_table=11 NZ_JAATTN010000068.1 RefSeq gene 330 695 . - . ID=gene-HGK48_RS04460;Name=HGK48_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04460 NZ_JAATTN010000068.1 GeneMarkS-2+ CDS 330 695 . - 0 ID=cds-WP_010404361.1;Parent=gene-HGK48_RS04460;Dbxref=GenBank:WP_010404361.1;Name=WP_010404361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04460;product=hypothetical protein;protein_id=WP_010404361.1;transl_table=11 NZ_JAATTN010000068.1 RefSeq gene 692 1762 . - . ID=gene-HGK48_RS04465;Name=HGK48_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04465 NZ_JAATTN010000068.1 GeneMarkS-2+ CDS 692 1762 . - 0 ID=cds-WP_034960263.1;Parent=gene-HGK48_RS04465;Dbxref=GenBank:WP_034960263.1;Name=WP_034960263.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04465;product=coiled-coil domain-containing protein;protein_id=WP_034960263.1;transl_table=11 NZ_JAATTN010000068.1 RefSeq gene 1764 2117 . - . ID=gene-HGK48_RS04470;Name=HGK48_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04470 NZ_JAATTN010000068.1 Protein Homology CDS 1764 2117 . - 0 ID=cds-WP_010404366.1;Parent=gene-HGK48_RS04470;Dbxref=GenBank:WP_010404366.1;Name=WP_010404366.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018755.6;locus_tag=HGK48_RS04470;product=DUF1353 domain-containing protein;protein_id=WP_010404366.1;transl_table=11 NZ_JAATTN010000068.1 RefSeq gene 2110 2748 . - . ID=gene-HGK48_RS04475;Name=HGK48_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04475 NZ_JAATTN010000068.1 GeneMarkS-2+ CDS 2110 2748 . - 0 ID=cds-WP_010404369.1;Parent=gene-HGK48_RS04475;Dbxref=GenBank:WP_010404369.1;Name=WP_010404369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04475;product=hypothetical protein;protein_id=WP_010404369.1;transl_table=11 NZ_JAATTN010000068.1 RefSeq gene 2748 3641 . - . ID=gene-HGK48_RS04480;Name=HGK48_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04480 NZ_JAATTN010000068.1 GeneMarkS-2+ CDS 2748 3641 . - 0 ID=cds-WP_010404372.1;Parent=gene-HGK48_RS04480;Dbxref=GenBank:WP_010404372.1;Name=WP_010404372.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04480;product=hypothetical protein;protein_id=WP_010404372.1;transl_table=11 NZ_JAATTN010000068.1 RefSeq gene 3655 4101 . - . ID=gene-HGK48_RS04485;Name=HGK48_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04485 NZ_JAATTN010000068.1 GeneMarkS-2+ CDS 3655 4101 . - 0 ID=cds-WP_010404376.1;Parent=gene-HGK48_RS04485;Dbxref=GenBank:WP_010404376.1;Name=WP_010404376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04485;product=hypothetical protein;protein_id=WP_010404376.1;transl_table=11 NZ_JAATTN010000068.1 RefSeq gene 4160 4630 . - . ID=gene-HGK48_RS04490;Name=HGK48_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04490 NZ_JAATTN010000068.1 GeneMarkS-2+ CDS 4160 4630 . - 0 ID=cds-WP_010404379.1;Parent=gene-HGK48_RS04490;Dbxref=GenBank:WP_010404379.1;Name=WP_010404379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04490;product=hypothetical protein;protein_id=WP_010404379.1;transl_table=11 NZ_JAATTN010000068.1 RefSeq gene 4637 5392 . - . ID=gene-HGK48_RS04495;Name=HGK48_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04495 NZ_JAATTN010000068.1 GeneMarkS-2+ CDS 4637 5392 . - 0 ID=cds-WP_010404382.1;Parent=gene-HGK48_RS04495;Dbxref=GenBank:WP_010404382.1;Name=WP_010404382.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04495;product=hypothetical protein;protein_id=WP_010404382.1;transl_table=11 NZ_JAATTN010000068.1 RefSeq gene 5392 6249 . - . ID=gene-HGK48_RS04500;Name=HGK48_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04500 NZ_JAATTN010000068.1 GeneMarkS-2+ CDS 5392 6249 . - 0 ID=cds-WP_010404385.1;Parent=gene-HGK48_RS04500;Dbxref=GenBank:WP_010404385.1;Name=WP_010404385.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04500;product=hypothetical protein;protein_id=WP_010404385.1;transl_table=11 NZ_JAATTN010000068.1 RefSeq gene 6249 7015 . - . ID=gene-HGK48_RS04505;Name=HGK48_RS04505;end_range=7015,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04505;partial=true NZ_JAATTN010000068.1 GeneMarkS-2+ CDS 6249 7015 . - 2 ID=cds-WP_168236709.1;Parent=gene-HGK48_RS04505;Dbxref=GenBank:WP_168236709.1;Name=WP_168236709.1;end_range=7015,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04505;partial=true;product=DUF4214 domain-containing protein;protein_id=WP_168236709.1;transl_table=11 ##sequence-region NZ_JAATTN010000069.1 1 6849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000069.1 RefSeq region 1 6849 . + . ID=NZ_JAATTN010000069.1:1..6849;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000069.1 RefSeq gene 1 287 . - . ID=gene-HGK48_RS04510;Name=fliW;gbkey=Gene;gene=fliW;gene_biotype=protein_coding;locus_tag=HGK48_RS04510;partial=true;start_range=.,1 NZ_JAATTN010000069.1 Protein Homology CDS 1 287 . - 0 ID=cds-WP_168236710.1;Parent=gene-HGK48_RS04510;Dbxref=GenBank:WP_168236710.1;Name=WP_168236710.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliW;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849638.1;locus_tag=HGK48_RS04510;partial=true;product=flagellar assembly protein FliW;protein_id=WP_168236710.1;start_range=.,1;transl_table=11 NZ_JAATTN010000069.1 RefSeq gene 397 1500 . - . ID=gene-HGK48_RS04515;Name=HGK48_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04515 NZ_JAATTN010000069.1 Protein Homology CDS 397 1500 . - 0 ID=cds-WP_002849637.1;Parent=gene-HGK48_RS04515;Dbxref=GenBank:WP_002849637.1;Name=WP_002849637.1;Ontology_term=GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849637.1;locus_tag=HGK48_RS04515;product=L-rhamnose mutarotase;protein_id=WP_002849637.1;transl_table=11 NZ_JAATTN010000069.1 RefSeq gene 1526 2725 . - . ID=gene-HGK48_RS04520;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=HGK48_RS04520 NZ_JAATTN010000069.1 Protein Homology CDS 1526 2725 . - 0 ID=cds-WP_002849636.1;Parent=gene-HGK48_RS04520;Dbxref=GenBank:WP_002849636.1;Name=WP_002849636.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849636.1;locus_tag=HGK48_RS04520;product=L-fucose:H+ symporter permease;protein_id=WP_002849636.1;transl_table=11 NZ_JAATTN010000069.1 RefSeq gene 2736 3512 . - . ID=gene-HGK48_RS04525;Name=HGK48_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04525 NZ_JAATTN010000069.1 Protein Homology CDS 2736 3512 . - 0 ID=cds-WP_002849635.1;Parent=gene-HGK48_RS04525;Dbxref=GenBank:WP_002849635.1;Name=WP_002849635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849635.1;locus_tag=HGK48_RS04525;product=SDR family oxidoreductase;protein_id=WP_002849635.1;transl_table=11 NZ_JAATTN010000069.1 RefSeq gene 3533 4780 . - . ID=gene-HGK48_RS04530;Name=HGK48_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04530 NZ_JAATTN010000069.1 Protein Homology CDS 3533 4780 . - 0 ID=cds-WP_065840788.1;Parent=gene-HGK48_RS04530;Dbxref=GenBank:WP_065840788.1;Name=WP_065840788.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014516706.1;locus_tag=HGK48_RS04530;product=UxaA family hydrolase;protein_id=WP_065840788.1;transl_table=11 NZ_JAATTN010000069.1 RefSeq pseudogene 4832 5050 . - . ID=gene-HGK48_RS11180;Name=HGK48_RS11180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11180;partial=true;pseudo=true;start_range=.,4832 NZ_JAATTN010000069.1 Protein Homology CDS 4832 5050 . - 0 ID=cds-HGK48_RS11180;Parent=gene-HGK48_RS11180;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020250.6;locus_tag=HGK48_RS11180;partial=true;product=UxaA family hydrolase;pseudo=true;start_range=.,4832;transl_table=11 NZ_JAATTN010000069.1 RefSeq gene 5047 5934 . - . ID=gene-HGK48_RS04535;Name=HGK48_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04535 NZ_JAATTN010000069.1 Protein Homology CDS 5047 5934 . - 0 ID=cds-WP_002849634.1;Parent=gene-HGK48_RS04535;Dbxref=GenBank:WP_002849634.1;Name=WP_002849634.1;Ontology_term=GO:0009436,GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=glyoxylate catabolic process|0009436||IEA,obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732065.1;locus_tag=HGK48_RS04535;product=dihydrodipicolinate synthase family protein;protein_id=WP_002849634.1;transl_table=11 NZ_JAATTN010000069.1 RefSeq gene 6161 6849 . - . ID=gene-HGK48_RS04540;Name=HGK48_RS04540;end_range=6849,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04540;partial=true NZ_JAATTN010000069.1 Protein Homology CDS 6161 6849 . - 2 ID=cds-WP_168236711.1;Parent=gene-HGK48_RS04540;Dbxref=GenBank:WP_168236711.1;Name=WP_168236711.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=6849,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732064.1;locus_tag=HGK48_RS04540;partial=true;product=IclR family transcriptional regulator;protein_id=WP_168236711.1;transl_table=11 ##sequence-region NZ_JAATTN010000006.1 1 21399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000006.1 RefSeq region 1 21399 . + . ID=NZ_JAATTN010000006.1:1..21399;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000006.1 RefSeq gene 1 1533 . + . ID=gene-HGK48_RS00730;Name=HGK48_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00730;partial=true;start_range=.,1 NZ_JAATTN010000006.1 Protein Homology CDS 1 1533 . + 0 ID=cds-WP_168236627.1;Parent=gene-HGK48_RS00730;Dbxref=GenBank:WP_168236627.1;Name=WP_168236627.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: protein motif:HMM:NF012376.6;locus_tag=HGK48_RS00730;partial=true;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_168236627.1;start_range=.,1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 1683 3314 . + . ID=gene-HGK48_RS00735;Name=HGK48_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00735 NZ_JAATTN010000006.1 Protein Homology CDS 1683 3314 . + 0 ID=cds-WP_024305261.1;Parent=gene-HGK48_RS00735;Dbxref=GenBank:WP_024305261.1;Name=WP_024305261.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850875.1;locus_tag=HGK48_RS00735;product=CTP synthase;protein_id=WP_024305261.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 3308 4900 . + . ID=gene-HGK48_RS00740;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=HGK48_RS00740 NZ_JAATTN010000006.1 Protein Homology CDS 3308 4900 . + 0 ID=cds-WP_002850876.1;Parent=gene-HGK48_RS00740;Dbxref=GenBank:WP_002850876.1;Name=WP_002850876.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850876.1;locus_tag=HGK48_RS00740;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_002850876.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 4901 6085 . + . ID=gene-HGK48_RS00745;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=HGK48_RS00745 NZ_JAATTN010000006.1 Protein Homology CDS 4901 6085 . + 0 ID=cds-WP_002850877.1;Parent=gene-HGK48_RS00745;Dbxref=GenBank:WP_002850877.1;Name=WP_002850877.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850877.1;locus_tag=HGK48_RS00745;product=Na+/H+ antiporter NhaA;protein_id=WP_002850877.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 6075 7619 . + . ID=gene-HGK48_RS00750;Name=HGK48_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00750 NZ_JAATTN010000006.1 Protein Homology CDS 6075 7619 . + 0 ID=cds-WP_011732333.1;Parent=gene-HGK48_RS00750;Dbxref=GenBank:WP_011732333.1;Name=WP_011732333.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012869.6;locus_tag=HGK48_RS00750;product=ATP-binding cassette domain-containing protein;protein_id=WP_011732333.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 7717 8463 . + . ID=gene-HGK48_RS00755;Name=HGK48_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00755 NZ_JAATTN010000006.1 Protein Homology CDS 7717 8463 . + 0 ID=cds-WP_002847781.1;Parent=gene-HGK48_RS00755;Dbxref=GenBank:WP_002847781.1;Name=WP_002847781.1;Ontology_term=GO:0042167,GO:0004392;gbkey=CDS;go_function=heme oxygenase (decyclizing) activity|0004392||IEA;go_process=heme catabolic process|0042167||IEA;inference=COORDINATES: protein motif:HMM:TIGR04109.1;locus_tag=HGK48_RS00755;product=HugZ family heme oxygenase;protein_id=WP_002847781.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 8463 8657 . + . ID=gene-HGK48_RS00760;Name=HGK48_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00760 NZ_JAATTN010000006.1 GeneMarkS-2+ CDS 8463 8657 . + 0 ID=cds-WP_011732334.1;Parent=gene-HGK48_RS00760;Dbxref=GenBank:WP_011732334.1;Name=WP_011732334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00760;product=hypothetical protein;protein_id=WP_011732334.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 8745 10739 . + . ID=gene-HGK48_RS00765;Name=HGK48_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00765 NZ_JAATTN010000006.1 Protein Homology CDS 8745 10739 . + 0 ID=cds-WP_002847783.1;Parent=gene-HGK48_RS00765;Dbxref=GenBank:WP_002847783.1;Name=WP_002847783.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012801.6;locus_tag=HGK48_RS00765;product=TonB-dependent receptor;protein_id=WP_002847783.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq pseudogene 10729 11710 . + . ID=gene-HGK48_RS00770;Name=HGK48_RS00770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS00770;pseudo=true NZ_JAATTN010000006.1 Protein Homology CDS 10729 11710 . + 0 ID=cds-HGK48_RS00770;Parent=gene-HGK48_RS00770;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732336.1;locus_tag=HGK48_RS00770;product=FecCD family ABC transporter permease;pseudo=true;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 11710 12486 . + . ID=gene-HGK48_RS00775;Name=HGK48_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00775 NZ_JAATTN010000006.1 Protein Homology CDS 11710 12486 . + 0 ID=cds-WP_034959934.1;Parent=gene-HGK48_RS00775;Dbxref=GenBank:WP_034959934.1;Name=WP_034959934.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732337.1;locus_tag=HGK48_RS00775;product=ABC transporter ATP-binding protein;protein_id=WP_034959934.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 12489 13283 . + . ID=gene-HGK48_RS00780;Name=HGK48_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00780 NZ_JAATTN010000006.1 Protein Homology CDS 12489 13283 . + 0 ID=cds-WP_002847788.1;Parent=gene-HGK48_RS00780;Dbxref=GenBank:WP_002847788.1;Name=WP_002847788.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949616.1;locus_tag=HGK48_RS00780;product=ABC transporter substrate-binding protein;protein_id=WP_002847788.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 13555 14064 . + . ID=gene-HGK48_RS00785;Name=HGK48_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00785 NZ_JAATTN010000006.1 Protein Homology CDS 13555 14064 . + 0 ID=cds-WP_002847790.1;Parent=gene-HGK48_RS00785;Dbxref=GenBank:WP_002847790.1;Name=WP_002847790.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: protein motif:HMM:NF024055.6;locus_tag=HGK48_RS00785;product=flavodoxin family protein;protein_id=WP_002847790.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 14068 14934 . - . ID=gene-HGK48_RS00790;Name=HGK48_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00790 NZ_JAATTN010000006.1 Protein Homology CDS 14068 14934 . - 0 ID=cds-WP_099032916.1;Parent=gene-HGK48_RS00790;Dbxref=GenBank:WP_099032916.1;Name=WP_099032916.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: protein motif:HMM:NF012425.6;locus_tag=HGK48_RS00790;product=catalase;protein_id=WP_099032916.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 15226 15302 . - . ID=gene-HGK48_RS00795;Name=HGK48_RS00795;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS00795 NZ_JAATTN010000006.1 tRNAscan-SE tRNA 15226 15302 . - . ID=rna-HGK48_RS00795;Parent=gene-HGK48_RS00795;anticodon=(pos:complement(15266..15268));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS00795;product=tRNA-Met NZ_JAATTN010000006.1 tRNAscan-SE exon 15226 15302 . - . ID=exon-HGK48_RS00795-1;Parent=rna-HGK48_RS00795;anticodon=(pos:complement(15266..15268));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS00795;product=tRNA-Met NZ_JAATTN010000006.1 RefSeq gene 15427 16185 . + . ID=gene-HGK48_RS00800;Name=HGK48_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00800 NZ_JAATTN010000006.1 GeneMarkS-2+ CDS 15427 16185 . + 0 ID=cds-WP_002847791.1;Parent=gene-HGK48_RS00800;Dbxref=GenBank:WP_002847791.1;Name=WP_002847791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00800;product=hypothetical protein;protein_id=WP_002847791.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 16248 18935 . - . ID=gene-HGK48_RS00805;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=HGK48_RS00805 NZ_JAATTN010000006.1 Protein Homology CDS 16248 18935 . - 0 ID=cds-WP_024305360.1;Parent=gene-HGK48_RS00805;Dbxref=GenBank:WP_024305360.1;Name=WP_024305360.1;Ontology_term=GO:0044781,GO:0009288;gbkey=CDS;gene=flgE;go_component=bacterial-type flagellum|0009288||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732339.1;locus_tag=HGK48_RS00805;product=flagellar hook protein FlgE;protein_id=WP_024305360.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 19090 19797 . - . ID=gene-HGK48_RS00810;Name=HGK48_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00810 NZ_JAATTN010000006.1 Protein Homology CDS 19090 19797 . - 0 ID=cds-WP_024305361.1;Parent=gene-HGK48_RS00810;Dbxref=GenBank:WP_024305361.1;Name=WP_024305361.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847793.1;locus_tag=HGK48_RS00810;product=glucosaminidase domain-containing protein;protein_id=WP_024305361.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 19778 20521 . - . ID=gene-HGK48_RS00815;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=HGK48_RS00815 NZ_JAATTN010000006.1 Protein Homology CDS 19778 20521 . - 0 ID=cds-WP_002847794.1;Parent=gene-HGK48_RS00815;Dbxref=GenBank:WP_002847794.1;Name=WP_002847794.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004317368.1;locus_tag=HGK48_RS00815;product=diaminopimelate epimerase;protein_id=WP_002847794.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 20502 21113 . - . ID=gene-HGK48_RS00820;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=HGK48_RS00820 NZ_JAATTN010000006.1 Protein Homology CDS 20502 21113 . - 0 ID=cds-WP_029662443.1;Parent=gene-HGK48_RS00820;Dbxref=GenBank:WP_029662443.1;Name=WP_029662443.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991657.1;locus_tag=HGK48_RS00820;product=dephospho-CoA kinase;protein_id=WP_029662443.1;transl_table=11 NZ_JAATTN010000006.1 RefSeq gene 21103 21399 . - . ID=gene-HGK48_RS00825;Name=HGK48_RS00825;end_range=21399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00825;partial=true NZ_JAATTN010000006.1 Protein Homology CDS 21103 21399 . - 0 ID=cds-WP_168236628.1;Parent=gene-HGK48_RS00825;Dbxref=GenBank:WP_168236628.1;Name=WP_168236628.1;end_range=21399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847808.1;locus_tag=HGK48_RS00825;partial=true;product=RidA family protein;protein_id=WP_168236628.1;transl_table=11 ##sequence-region NZ_JAATTN010000070.1 1 6898 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000070.1 RefSeq region 1 6898 . + . ID=NZ_JAATTN010000070.1:1..6898;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000070.1 RefSeq gene 136 2913 . + . ID=gene-HGK48_RS04545;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=HGK48_RS04545 NZ_JAATTN010000070.1 Protein Homology CDS 136 2913 . + 0 ID=cds-WP_011732100.1;Parent=gene-HGK48_RS04545;Dbxref=GenBank:WP_011732100.1;Name=WP_011732100.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344187.1;locus_tag=HGK48_RS04545;product=nitrate reductase catalytic subunit NapA;protein_id=WP_011732100.1;transl_table=11 NZ_JAATTN010000070.1 RefSeq gene 2916 3668 . + . ID=gene-HGK48_RS04550;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=HGK48_RS04550 NZ_JAATTN010000070.1 Protein Homology CDS 2916 3668 . + 0 ID=cds-WP_002849813.1;Parent=gene-HGK48_RS04550;Dbxref=GenBank:WP_002849813.1;Name=WP_002849813.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849813.1;locus_tag=HGK48_RS04550;product=ferredoxin-type protein NapG;protein_id=WP_002849813.1;transl_table=11 NZ_JAATTN010000070.1 RefSeq gene 3665 4450 . + . ID=gene-HGK48_RS04555;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=HGK48_RS04555 NZ_JAATTN010000070.1 Protein Homology CDS 3665 4450 . + 0 ID=cds-WP_002849812.1;Parent=gene-HGK48_RS04555;Dbxref=GenBank:WP_002849812.1;Name=WP_002849812.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849812.1;locus_tag=HGK48_RS04555;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_002849812.1;transl_table=11 NZ_JAATTN010000070.1 RefSeq gene 4447 4980 . + . ID=gene-HGK48_RS04560;Name=HGK48_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04560 NZ_JAATTN010000070.1 Protein Homology CDS 4447 4980 . + 0 ID=cds-WP_002849811.1;Parent=gene-HGK48_RS04560;Dbxref=GenBank:WP_002849811.1;Name=WP_002849811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849811.1;locus_tag=HGK48_RS04560;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_002849811.1;transl_table=11 NZ_JAATTN010000070.1 RefSeq gene 4983 5453 . + . ID=gene-HGK48_RS04565;Name=HGK48_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04565 NZ_JAATTN010000070.1 Protein Homology CDS 4983 5453 . + 0 ID=cds-WP_002849810.1;Parent=gene-HGK48_RS04565;Dbxref=GenBank:WP_002849810.1;Name=WP_002849810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849810.1;locus_tag=HGK48_RS04565;product=4Fe-4S binding protein;protein_id=WP_002849810.1;transl_table=11 NZ_JAATTN010000070.1 RefSeq gene 5450 6349 . + . ID=gene-HGK48_RS04570;Name=HGK48_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04570 NZ_JAATTN010000070.1 GeneMarkS-2+ CDS 5450 6349 . + 0 ID=cds-WP_002849809.1;Parent=gene-HGK48_RS04570;Dbxref=GenBank:WP_002849809.1;Name=WP_002849809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04570;product=WD40 repeat domain-containing protein;protein_id=WP_002849809.1;transl_table=11 NZ_JAATTN010000070.1 RefSeq gene 6346 6681 . + . ID=gene-HGK48_RS04575;Name=HGK48_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04575 NZ_JAATTN010000070.1 Protein Homology CDS 6346 6681 . + 0 ID=cds-WP_002849808.1;Parent=gene-HGK48_RS04575;Dbxref=GenBank:WP_002849808.1;Name=WP_002849808.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015861.6;locus_tag=HGK48_RS04575;product=chaperone NapD;protein_id=WP_002849808.1;transl_table=11 NZ_JAATTN010000070.1 RefSeq gene 6720 6898 . - . ID=gene-HGK48_RS04580;Name=HGK48_RS04580;end_range=6898,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04580;partial=true NZ_JAATTN010000070.1 Protein Homology CDS 6720 6898 . - 2 ID=cds-WP_042764725.1;Parent=gene-HGK48_RS04580;Dbxref=GenBank:WP_042764725.1;Name=WP_042764725.1;Ontology_term=GO:0008654,GO:0004609;end_range=6898,.;gbkey=CDS;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: protein motif:HMM:NF014696.6;locus_tag=HGK48_RS04580;partial=true;product=phosphatidylserine decarboxylase;protein_id=WP_042764725.1;transl_table=11 ##sequence-region NZ_JAATTN010000071.1 1 6789 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000071.1 RefSeq region 1 6789 . + . ID=NZ_JAATTN010000071.1:1..6789;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000071.1 RefSeq pseudogene 1 874 . - . ID=gene-HGK48_RS04585;Name=HGK48_RS04585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS04585;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000071.1 GeneMarkS-2+ CDS 1 874 . - 0 ID=cds-HGK48_RS04585;Parent=gene-HGK48_RS04585;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04585;partial=true;product=PD-(D/E)XK nuclease family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000071.1 RefSeq gene 855 1388 . - . ID=gene-HGK48_RS04590;Name=HGK48_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04590 NZ_JAATTN010000071.1 GeneMarkS-2+ CDS 855 1388 . - 0 ID=cds-WP_002848565.1;Parent=gene-HGK48_RS04590;Dbxref=GenBank:WP_002848565.1;Name=WP_002848565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04590;product=FixH family protein;protein_id=WP_002848565.1;transl_table=11 NZ_JAATTN010000071.1 RefSeq gene 1392 1991 . - . ID=gene-HGK48_RS11450;Name=HGK48_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11450 NZ_JAATTN010000071.1 GeneMarkS-2+ CDS 1392 1991 . - 0 ID=cds-WP_029662426.1;Parent=gene-HGK48_RS11450;Dbxref=GenBank:WP_029662426.1;Name=WP_029662426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11450;product=hypothetical protein;protein_id=WP_029662426.1;transl_table=11 NZ_JAATTN010000071.1 RefSeq gene 1988 2089 . - . ID=gene-HGK48_RS11190;Name=HGK48_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11190 NZ_JAATTN010000071.1 Protein Homology CDS 1988 2089 . - 0 ID=cds-WP_002848561.1;Parent=gene-HGK48_RS11190;Dbxref=GenBank:WP_002848561.1;Name=WP_002848561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011049988.1;locus_tag=HGK48_RS11190;product=hypothetical protein;protein_id=WP_002848561.1;transl_table=11 NZ_JAATTN010000071.1 RefSeq gene 2092 2310 . - . ID=gene-HGK48_RS04600;Name=HGK48_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04600 NZ_JAATTN010000071.1 Protein Homology CDS 2092 2310 . - 0 ID=cds-WP_002848559.1;Parent=gene-HGK48_RS04600;Dbxref=GenBank:WP_002848559.1;Name=WP_002848559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848559.1;locus_tag=HGK48_RS04600;product=DUF4006 family protein;protein_id=WP_002848559.1;transl_table=11 NZ_JAATTN010000071.1 RefSeq gene 2312 3175 . - . ID=gene-HGK48_RS04605;Name=HGK48_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04605 NZ_JAATTN010000071.1 Protein Homology CDS 2312 3175 . - 0 ID=cds-WP_002848557.1;Parent=gene-HGK48_RS04605;Dbxref=GenBank:WP_002848557.1;Name=WP_002848557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900989.1;locus_tag=HGK48_RS04605;product=cbb3-type cytochrome c oxidase N-terminal domain-containing protein;protein_id=WP_002848557.1;transl_table=11 NZ_JAATTN010000071.1 RefSeq gene 3172 3402 . - . ID=gene-HGK48_RS04610;Name=HGK48_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04610 NZ_JAATTN010000071.1 Protein Homology CDS 3172 3402 . - 0 ID=cds-WP_002848554.1;Parent=gene-HGK48_RS04610;Dbxref=GenBank:WP_002848554.1;Name=WP_002848554.1;Ontology_term=GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848554.1;locus_tag=HGK48_RS04610;product=cytochrome c oxidase%2C cbb3-type%2C CcoQ subunit;protein_id=WP_002848554.1;transl_table=11 NZ_JAATTN010000071.1 RefSeq gene 3413 4078 . - . ID=gene-HGK48_RS04615;Name=ccoO;gbkey=Gene;gene=ccoO;gene_biotype=protein_coding;locus_tag=HGK48_RS04615 NZ_JAATTN010000071.1 Protein Homology CDS 3413 4078 . - 0 ID=cds-WP_002848552.1;Parent=gene-HGK48_RS04615;Dbxref=GenBank:WP_002848552.1;Name=WP_002848552.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoO;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344869.1;locus_tag=HGK48_RS04615;product=cytochrome-c oxidase%2C cbb3-type subunit II;protein_id=WP_002848552.1;transl_table=11 NZ_JAATTN010000071.1 RefSeq gene 4089 5555 . - . ID=gene-HGK48_RS04620;Name=ccoN;gbkey=Gene;gene=ccoN;gene_biotype=protein_coding;locus_tag=HGK48_RS04620 NZ_JAATTN010000071.1 Protein Homology CDS 4089 5555 . - 0 ID=cds-WP_002848550.1;Parent=gene-HGK48_RS04620;Dbxref=GenBank:WP_002848550.1;Name=WP_002848550.1;Ontology_term=GO:0004129,GO:0045277;gbkey=CDS;gene=ccoN;go_component=respiratory chain complex IV|0045277||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344870.1;locus_tag=HGK48_RS04620;product=cytochrome-c oxidase%2C cbb3-type subunit I;protein_id=WP_002848550.1;transl_table=11 NZ_JAATTN010000071.1 RefSeq gene 5715 6395 . - . ID=gene-HGK48_RS04625;Name=HGK48_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04625 NZ_JAATTN010000071.1 Protein Homology CDS 5715 6395 . - 0 ID=cds-WP_002848548.1;Parent=gene-HGK48_RS04625;Dbxref=GenBank:WP_002848548.1;Name=WP_002848548.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848548.1;locus_tag=HGK48_RS04625;product=response regulator transcription factor;protein_id=WP_002848548.1;transl_table=11 NZ_JAATTN010000071.1 RefSeq gene 6388 6789 . - . ID=gene-HGK48_RS04630;Name=HGK48_RS04630;end_range=6789,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04630;partial=true NZ_JAATTN010000071.1 Protein Homology CDS 6388 6789 . - 0 ID=cds-WP_168236712.1;Parent=gene-HGK48_RS04630;Dbxref=GenBank:WP_168236712.1;Name=WP_168236712.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;end_range=6789,.;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731792.1;locus_tag=HGK48_RS04630;partial=true;product=sensor histidine kinase;protein_id=WP_168236712.1;transl_table=11 ##sequence-region NZ_JAATTN010000072.1 1 6764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000072.1 RefSeq region 1 6764 . + . ID=NZ_JAATTN010000072.1:1..6764;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000072.1 RefSeq gene 1 507 . - . ID=gene-HGK48_RS04635;Name=HGK48_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04635;partial=true;start_range=.,1 NZ_JAATTN010000072.1 Protein Homology CDS 1 507 . - 0 ID=cds-WP_206120297.1;Parent=gene-HGK48_RS04635;Dbxref=GenBank:WP_206120297.1;Name=WP_206120297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731734.1;locus_tag=HGK48_RS04635;partial=true;product=NFACT family protein;protein_id=WP_206120297.1;start_range=.,1;transl_table=11 NZ_JAATTN010000072.1 RefSeq gene 564 1829 . + . ID=gene-HGK48_RS04640;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=HGK48_RS04640 NZ_JAATTN010000072.1 Protein Homology CDS 564 1829 . + 0 ID=cds-WP_002848215.1;Parent=gene-HGK48_RS04640;Dbxref=GenBank:WP_002848215.1;Name=WP_002848215.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011992759.1;locus_tag=HGK48_RS04640;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_002848215.1;transl_table=11 NZ_JAATTN010000072.1 RefSeq gene 1841 2383 . + . ID=gene-HGK48_RS04645;Name=HGK48_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04645 NZ_JAATTN010000072.1 Protein Homology CDS 1841 2383 . + 0 ID=cds-WP_002848217.1;Parent=gene-HGK48_RS04645;Dbxref=GenBank:WP_002848217.1;Name=WP_002848217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024214.6;locus_tag=HGK48_RS04645;product=NTP transferase domain-containing protein;protein_id=WP_002848217.1;transl_table=11 NZ_JAATTN010000072.1 RefSeq gene 2380 3402 . + . ID=gene-HGK48_RS04650;Name=HGK48_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04650 NZ_JAATTN010000072.1 Protein Homology CDS 2380 3402 . + 0 ID=cds-WP_011731735.1;Parent=gene-HGK48_RS04650;Dbxref=GenBank:WP_011731735.1;Name=WP_011731735.1;Ontology_term=GO:0006629,GO:0004620,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731735.1;locus_tag=HGK48_RS04650;product=phospholipase A;protein_id=WP_011731735.1;transl_table=11 NZ_JAATTN010000072.1 RefSeq gene 3443 4156 . - . ID=gene-HGK48_RS04655;Name=HGK48_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04655 NZ_JAATTN010000072.1 Protein Homology CDS 3443 4156 . - 0 ID=cds-WP_002848219.1;Parent=gene-HGK48_RS04655;Dbxref=GenBank:WP_002848219.1;Name=WP_002848219.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023169.6;locus_tag=HGK48_RS04655;product=AMIN domain-containing protein;protein_id=WP_002848219.1;transl_table=11 NZ_JAATTN010000072.1 RefSeq gene 4173 4451 . - . ID=gene-HGK48_RS04660;Name=HGK48_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04660 NZ_JAATTN010000072.1 Protein Homology CDS 4173 4451 . - 0 ID=cds-WP_002848222.1;Parent=gene-HGK48_RS04660;Dbxref=GenBank:WP_002848222.1;Name=WP_002848222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009650923.1;locus_tag=HGK48_RS04660;product=hypothetical protein;protein_id=WP_002848222.1;transl_table=11 NZ_JAATTN010000072.1 RefSeq gene 4448 5698 . - . ID=gene-HGK48_RS04665;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=HGK48_RS04665 NZ_JAATTN010000072.1 Protein Homology CDS 4448 5698 . - 0 ID=cds-WP_002848225.1;Parent=gene-HGK48_RS04665;Dbxref=GenBank:WP_002848225.1;Name=WP_002848225.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848225.1;locus_tag=HGK48_RS04665;product=phosphopyruvate hydratase;protein_id=WP_002848225.1;transl_table=11 NZ_JAATTN010000072.1 RefSeq gene 5698 6735 . - . ID=gene-HGK48_RS04670;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=HGK48_RS04670 NZ_JAATTN010000072.1 Protein Homology CDS 5698 6735 . - 0 ID=cds-WP_002848230.1;Parent=gene-HGK48_RS04670;Dbxref=GenBank:WP_002848230.1;Name=WP_002848230.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848230.1;locus_tag=HGK48_RS04670;product=recombinase RecA;protein_id=WP_002848230.1;transl_table=11 ##sequence-region NZ_JAATTN010000073.1 1 6599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000073.1 RefSeq region 1 6599 . + . ID=NZ_JAATTN010000073.1:1..6599;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000073.1 RefSeq gene 1 133 . + . ID=gene-HGK48_RS04675;Name=HGK48_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04675;partial=true;start_range=.,1 NZ_JAATTN010000073.1 Protein Homology CDS 1 133 . + 1 ID=cds-WP_206120298.1;Parent=gene-HGK48_RS04675;Dbxref=GenBank:WP_206120298.1;Name=WP_206120298.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849268.1;locus_tag=HGK48_RS04675;partial=true;product=flagellar basal body L-ring protein FlgH;protein_id=WP_206120298.1;start_range=.,1;transl_table=11 NZ_JAATTN010000073.1 RefSeq gene 318 941 . + . ID=gene-HGK48_RS04680;Name=HGK48_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04680 NZ_JAATTN010000073.1 Protein Homology CDS 318 941 . + 0 ID=cds-WP_024305223.1;Parent=gene-HGK48_RS04680;Dbxref=GenBank:WP_024305223.1;Name=WP_024305223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731967.1;locus_tag=HGK48_RS04680;product=DUF305 domain-containing protein;protein_id=WP_024305223.1;transl_table=11 NZ_JAATTN010000073.1 RefSeq gene 1126 2802 . + . ID=gene-HGK48_RS04685;Name=HGK48_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04685 NZ_JAATTN010000073.1 Protein Homology CDS 1126 2802 . + 0 ID=cds-WP_002849272.1;Parent=gene-HGK48_RS04685;Dbxref=GenBank:WP_002849272.1;Name=WP_002849272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849272.1;locus_tag=HGK48_RS04685;product=acetolactate synthase large subunit;protein_id=WP_002849272.1;transl_table=11 NZ_JAATTN010000073.1 RefSeq gene 2806 3267 . + . ID=gene-HGK48_RS04690;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=HGK48_RS04690 NZ_JAATTN010000073.1 Protein Homology CDS 2806 3267 . + 0 ID=cds-WP_002849273.1;Parent=gene-HGK48_RS04690;Dbxref=GenBank:WP_002849273.1;Name=WP_002849273.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849273.1;locus_tag=HGK48_RS04690;product=acetolactate synthase small subunit;protein_id=WP_002849273.1;transl_table=11 NZ_JAATTN010000073.1 RefSeq gene 3267 4214 . + . ID=gene-HGK48_RS04695;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=HGK48_RS04695 NZ_JAATTN010000073.1 Protein Homology CDS 3267 4214 . + 0 ID=cds-WP_002849276.1;Parent=gene-HGK48_RS04695;Dbxref=GenBank:WP_002849276.1;Name=WP_002849276.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849276.1;locus_tag=HGK48_RS04695;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_002849276.1;transl_table=11 NZ_JAATTN010000073.1 RefSeq gene 4211 4438 . + . ID=gene-HGK48_RS04700;Name=HGK48_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04700 NZ_JAATTN010000073.1 Protein Homology CDS 4211 4438 . + 0 ID=cds-WP_002849277.1;Parent=gene-HGK48_RS04700;Dbxref=GenBank:WP_002849277.1;Name=WP_002849277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849277.1;locus_tag=HGK48_RS04700;product=hypothetical protein;protein_id=WP_002849277.1;transl_table=11 NZ_JAATTN010000073.1 RefSeq gene 4435 5043 . - . ID=gene-HGK48_RS04705;Name=HGK48_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04705 NZ_JAATTN010000073.1 Protein Homology CDS 4435 5043 . - 0 ID=cds-WP_002849284.1;Parent=gene-HGK48_RS04705;Dbxref=GenBank:WP_002849284.1;Name=WP_002849284.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849284.1;locus_tag=HGK48_RS04705;product=DedA family protein;protein_id=WP_002849284.1;transl_table=11 NZ_JAATTN010000073.1 RefSeq gene 5153 5983 . + . ID=gene-HGK48_RS04710;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=HGK48_RS04710 NZ_JAATTN010000073.1 Protein Homology CDS 5153 5983 . + 0 ID=cds-WP_002849285.1;Parent=gene-HGK48_RS04710;Dbxref=GenBank:WP_002849285.1;Name=WP_002849285.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849285.1;locus_tag=HGK48_RS04710;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_002849285.1;transl_table=11 NZ_JAATTN010000073.1 RefSeq pseudogene 6184 6599 . + . ID=gene-HGK48_RS04715;Name=HGK48_RS04715;end_range=6599,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS04715;partial=true;pseudo=true NZ_JAATTN010000073.1 Protein Homology CDS 6184 6599 . + 0 ID=cds-HGK48_RS04715;Parent=gene-HGK48_RS04715;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6599,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849286.1;locus_tag=HGK48_RS04715;partial=true;product=formyltetrahydrofolate deformylase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000074.1 1 6443 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000074.1 RefSeq region 1 6443 . + . ID=NZ_JAATTN010000074.1:1..6443;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000074.1 RefSeq gene 1 616 . + . ID=gene-HGK48_RS04720;Name=HGK48_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04720;partial=true;start_range=.,1 NZ_JAATTN010000074.1 Protein Homology CDS 1 616 . + 1 ID=cds-WP_168236713.1;Parent=gene-HGK48_RS04720;Dbxref=GenBank:WP_168236713.1;Name=WP_168236713.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.6;locus_tag=HGK48_RS04720;partial=true;product=EAL domain-containing protein;protein_id=WP_168236713.1;start_range=.,1;transl_table=11 NZ_JAATTN010000074.1 RefSeq gene 619 1470 . + . ID=gene-HGK48_RS04725;Name=HGK48_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04725 NZ_JAATTN010000074.1 Protein Homology CDS 619 1470 . + 0 ID=cds-WP_002848535.1;Parent=gene-HGK48_RS04725;Dbxref=GenBank:WP_002848535.1;Name=WP_002848535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848535.1;locus_tag=HGK48_RS04725;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_002848535.1;transl_table=11 NZ_JAATTN010000074.1 RefSeq gene 1481 2731 . + . ID=gene-HGK48_RS04730;Name=HGK48_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04730 NZ_JAATTN010000074.1 Protein Homology CDS 1481 2731 . + 0 ID=cds-WP_002848536.1;Parent=gene-HGK48_RS04730;Dbxref=GenBank:WP_002848536.1;Name=WP_002848536.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009650792.1;locus_tag=HGK48_RS04730;product=adenylosuccinate synthase;protein_id=WP_002848536.1;transl_table=11 NZ_JAATTN010000074.1 RefSeq gene 2728 3153 . + . ID=gene-HGK48_RS04735;Name=HGK48_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04735 NZ_JAATTN010000074.1 Protein Homology CDS 2728 3153 . + 0 ID=cds-WP_002848538.1;Parent=gene-HGK48_RS04735;Dbxref=GenBank:WP_002848538.1;Name=WP_002848538.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014144.6;locus_tag=HGK48_RS04735;product=flagellar export protein FliJ;protein_id=WP_002848538.1;transl_table=11 NZ_JAATTN010000074.1 RefSeq gene 3150 3683 . + . ID=gene-HGK48_RS04740;Name=HGK48_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04740 NZ_JAATTN010000074.1 Protein Homology CDS 3150 3683 . + 0 ID=cds-WP_002848540.1;Parent=gene-HGK48_RS04740;Dbxref=GenBank:WP_002848540.1;Name=WP_002848540.1;Ontology_term=GO:0044781;gbkey=CDS;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848540.1;locus_tag=HGK48_RS04740;product=MotE family protein;protein_id=WP_002848540.1;transl_table=11 NZ_JAATTN010000074.1 RefSeq gene 3810 4361 . + . ID=gene-HGK48_RS04745;Name=HGK48_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04745 NZ_JAATTN010000074.1 Protein Homology CDS 3810 4361 . + 0 ID=cds-WP_002848542.1;Parent=gene-HGK48_RS04745;Dbxref=GenBank:WP_002848542.1;Name=WP_002848542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991798.1;locus_tag=HGK48_RS04745;product=DUF507 family protein;protein_id=WP_002848542.1;transl_table=11 NZ_JAATTN010000074.1 RefSeq gene 4361 5479 . + . ID=gene-HGK48_RS04750;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=HGK48_RS04750 NZ_JAATTN010000074.1 Protein Homology CDS 4361 5479 . + 0 ID=cds-WP_002848544.1;Parent=gene-HGK48_RS04750;Dbxref=GenBank:WP_002848544.1;Name=WP_002848544.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002785853.1;locus_tag=HGK48_RS04750;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_002848544.1;transl_table=11 NZ_JAATTN010000074.1 RefSeq gene 5479 6144 . + . ID=gene-HGK48_RS04755;Name=HGK48_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04755 NZ_JAATTN010000074.1 Protein Homology CDS 5479 6144 . + 0 ID=cds-WP_011731791.1;Parent=gene-HGK48_RS04755;Dbxref=GenBank:WP_011731791.1;Name=WP_011731791.1;Ontology_term=GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731791.1;locus_tag=HGK48_RS04755;product=sulfite exporter TauE/SafE family protein;protein_id=WP_011731791.1;transl_table=11 NZ_JAATTN010000074.1 RefSeq gene 6141 6443 . + . ID=gene-HGK48_RS04760;Name=HGK48_RS04760;end_range=6443,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04760;partial=true NZ_JAATTN010000074.1 Protein Homology CDS 6141 6443 . + 0 ID=cds-WP_168236714.1;Parent=gene-HGK48_RS04760;Dbxref=GenBank:WP_168236714.1;Name=WP_168236714.1;Ontology_term=GO:0007165,GO:0005515;end_range=6443,.;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731792.1;locus_tag=HGK48_RS04760;partial=true;product=PAS domain-containing protein;protein_id=WP_168236714.1;transl_table=11 ##sequence-region NZ_JAATTN010000075.1 1 6510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000075.1 RefSeq region 1 6510 . + . ID=NZ_JAATTN010000075.1:1..6510;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000075.1 RefSeq gene 131 718 . + . ID=gene-HGK48_RS04770;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=HGK48_RS04770 NZ_JAATTN010000075.1 Protein Homology CDS 131 718 . + 0 ID=cds-WP_002850616.1;Parent=gene-HGK48_RS04770;Dbxref=GenBank:WP_002850616.1;Name=WP_002850616.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850616.1;locus_tag=HGK48_RS04770;product=GTP cyclohydrolase II;protein_id=WP_002850616.1;transl_table=11 NZ_JAATTN010000075.1 RefSeq gene 702 1250 . + . ID=gene-HGK48_RS04775;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=HGK48_RS04775 NZ_JAATTN010000075.1 Protein Homology CDS 702 1250 . + 0 ID=cds-WP_002850618.1;Parent=gene-HGK48_RS04775;Dbxref=GenBank:WP_002850618.1;Name=WP_002850618.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850618.1;locus_tag=HGK48_RS04775;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_002850618.1;transl_table=11 NZ_JAATTN010000075.1 RefSeq gene 1244 1438 . + . ID=gene-HGK48_RS04780;Name=HGK48_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04780 NZ_JAATTN010000075.1 Protein Homology CDS 1244 1438 . + 0 ID=cds-WP_002850620.1;Parent=gene-HGK48_RS04780;Dbxref=GenBank:WP_002850620.1;Name=WP_002850620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850620.1;locus_tag=HGK48_RS04780;product=PP0621 family protein;protein_id=WP_002850620.1;transl_table=11 NZ_JAATTN010000075.1 RefSeq gene 1435 1749 . + . ID=gene-HGK48_RS04785;Name=HGK48_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04785 NZ_JAATTN010000075.1 GeneMarkS-2+ CDS 1435 1749 . + 0 ID=cds-WP_002850622.1;Parent=gene-HGK48_RS04785;Dbxref=GenBank:WP_002850622.1;Name=WP_002850622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04785;product=hypothetical protein;protein_id=WP_002850622.1;transl_table=11 NZ_JAATTN010000075.1 RefSeq gene 1749 2615 . + . ID=gene-HGK48_RS04790;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=HGK48_RS04790 NZ_JAATTN010000075.1 Protein Homology CDS 1749 2615 . + 0 ID=cds-WP_002850624.1;Parent=gene-HGK48_RS04790;Dbxref=GenBank:WP_002850624.1;Name=WP_002850624.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850624.1;locus_tag=HGK48_RS04790;product=zinc metalloprotease HtpX;protein_id=WP_002850624.1;transl_table=11 NZ_JAATTN010000075.1 RefSeq gene 2625 3638 . - . ID=gene-HGK48_RS04795;Name=HGK48_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04795 NZ_JAATTN010000075.1 Protein Homology CDS 2625 3638 . - 0 ID=cds-WP_011732250.1;Parent=gene-HGK48_RS04795;Dbxref=GenBank:WP_011732250.1;Name=WP_011732250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002874533.1;locus_tag=HGK48_RS04795;product=alanine racemase;protein_id=WP_011732250.1;transl_table=11 NZ_JAATTN010000075.1 RefSeq gene 3631 3891 . - . ID=gene-HGK48_RS04800;Name=cmeU;gbkey=Gene;gene=cmeU;gene_biotype=protein_coding;locus_tag=HGK48_RS04800 NZ_JAATTN010000075.1 Protein Homology CDS 3631 3891 . - 0 ID=cds-WP_002850634.1;Parent=gene-HGK48_RS04800;Dbxref=GenBank:WP_002850634.1;Name=WP_002850634.1;gbkey=CDS;gene=cmeU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850634.1;locus_tag=HGK48_RS04800;product=CmeU family protein;protein_id=WP_002850634.1;transl_table=11 NZ_JAATTN010000075.1 RefSeq gene 3904 4872 . - . ID=gene-HGK48_RS04805;Name=pgp2;gbkey=Gene;gene=pgp2;gene_biotype=protein_coding;locus_tag=HGK48_RS04805 NZ_JAATTN010000075.1 Protein Homology CDS 3904 4872 . - 0 ID=cds-WP_011732251.1;Parent=gene-HGK48_RS04805;Dbxref=GenBank:WP_011732251.1;Name=WP_011732251.1;gbkey=CDS;gene=pgp2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732251.1;locus_tag=HGK48_RS04805;product=cell shape-determining L%2CD-carboxypeptidase Pgp2;protein_id=WP_011732251.1;transl_table=11 NZ_JAATTN010000075.1 RefSeq gene 4998 5444 . + . ID=gene-HGK48_RS04810;Name=HGK48_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04810 NZ_JAATTN010000075.1 Protein Homology CDS 4998 5444 . + 0 ID=cds-WP_002850636.1;Parent=gene-HGK48_RS04810;Dbxref=GenBank:WP_002850636.1;Name=WP_002850636.1;Ontology_term=GO:0016531;gbkey=CDS;go_function=copper chaperone activity|0016531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850636.1;locus_tag=HGK48_RS04810;product=copper chaperone PCu(A)C;protein_id=WP_002850636.1;transl_table=11 NZ_JAATTN010000075.1 RefSeq gene 5513 6510 . + . ID=gene-HGK48_RS04815;Name=HGK48_RS04815;end_range=6510,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04815;partial=true NZ_JAATTN010000075.1 GeneMarkS-2+ CDS 5513 6510 . + 0 ID=cds-WP_168236715.1;Parent=gene-HGK48_RS04815;Dbxref=GenBank:WP_168236715.1;Name=WP_168236715.1;end_range=6510,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04815;partial=true;product=hypothetical protein;protein_id=WP_168236715.1;transl_table=11 ##sequence-region NZ_JAATTN010000076.1 1 6564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000076.1 RefSeq region 1 6564 . + . ID=NZ_JAATTN010000076.1:1..6564;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000076.1 RefSeq pseudogene 1 169 . - . ID=gene-HGK48_RS11195;Name=HGK48_RS11195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11195;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000076.1 Protein Homology CDS 1 169 . - 0 ID=cds-HGK48_RS11195;Parent=gene-HGK48_RS11195;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012001812.1;locus_tag=HGK48_RS11195;partial=true;product=hydrogenase expression/formation protein HypE;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000076.1 RefSeq gene 171 1259 . - . ID=gene-HGK48_RS04825;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=HGK48_RS04825 NZ_JAATTN010000076.1 Protein Homology CDS 171 1259 . - 0 ID=cds-WP_002849463.1;Parent=gene-HGK48_RS04825;Dbxref=GenBank:WP_002849463.1;Name=WP_002849463.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849463.1;locus_tag=HGK48_RS04825;product=hydrogenase formation protein HypD;protein_id=WP_002849463.1;transl_table=11 NZ_JAATTN010000076.1 RefSeq gene 1259 1537 . - . ID=gene-HGK48_RS04830;Name=HGK48_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04830 NZ_JAATTN010000076.1 Protein Homology CDS 1259 1537 . - 0 ID=cds-WP_002849464.1;Parent=gene-HGK48_RS04830;Dbxref=GenBank:WP_002849464.1;Name=WP_002849464.1;Ontology_term=GO:0051604,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849464.1;locus_tag=HGK48_RS04830;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_002849464.1;transl_table=11 NZ_JAATTN010000076.1 RefSeq gene 1537 2325 . - . ID=gene-HGK48_RS04835;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=HGK48_RS04835 NZ_JAATTN010000076.1 Protein Homology CDS 1537 2325 . - 0 ID=cds-WP_002849465.1;Parent=gene-HGK48_RS04835;Dbxref=GenBank:WP_002849465.1;Name=WP_002849465.1;Ontology_term=GO:0036211,GO:0051604,GO:0000166,GO:0003924,GO:0016151,GO:0016530;gbkey=CDS;gene=hypB;go_function=nucleotide binding|0000166||IEA,GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA,metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009494362.1;locus_tag=HGK48_RS04835;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_002849465.1;transl_table=11 NZ_JAATTN010000076.1 RefSeq gene 2349 2771 . - . ID=gene-HGK48_RS04840;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=HGK48_RS04840 NZ_JAATTN010000076.1 Protein Homology CDS 2349 2771 . - 0 ID=cds-WP_002849466.1;Parent=gene-HGK48_RS04840;Dbxref=GenBank:WP_002849466.1;Name=WP_002849466.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732006.1;locus_tag=HGK48_RS04840;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_002849466.1;transl_table=11 NZ_JAATTN010000076.1 RefSeq gene 2785 5010 . - . ID=gene-HGK48_RS04845;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=HGK48_RS04845 NZ_JAATTN010000076.1 Protein Homology CDS 2785 5010 . - 0 ID=cds-WP_002849467.1;Parent=gene-HGK48_RS04845;Dbxref=GenBank:WP_002849467.1;Name=WP_002849467.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732007.1;locus_tag=HGK48_RS04845;product=carbamoyltransferase HypF;protein_id=WP_002849467.1;transl_table=11 NZ_JAATTN010000076.1 RefSeq gene 4997 6436 . - . ID=gene-HGK48_RS04850;Name=HGK48_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04850 NZ_JAATTN010000076.1 GeneMarkS-2+ CDS 4997 6436 . - 0 ID=cds-WP_002849468.1;Parent=gene-HGK48_RS04850;Dbxref=GenBank:WP_002849468.1;Name=WP_002849468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04850;product=hypothetical protein;protein_id=WP_002849468.1;transl_table=11 ##sequence-region NZ_JAATTN010000077.1 1 6518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000077.1 RefSeq region 1 6518 . + . ID=NZ_JAATTN010000077.1:1..6518;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000077.1 RefSeq gene 1 429 . - . ID=gene-HGK48_RS04855;Name=HGK48_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04855;partial=true;start_range=.,1 NZ_JAATTN010000077.1 GeneMarkS-2+ CDS 1 429 . - 0 ID=cds-WP_168236716.1;Parent=gene-HGK48_RS04855;Dbxref=GenBank:WP_168236716.1;Name=WP_168236716.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04855;partial=true;product=hypothetical protein;protein_id=WP_168236716.1;start_range=.,1;transl_table=11 NZ_JAATTN010000077.1 RefSeq gene 496 1107 . - . ID=gene-HGK48_RS04860;Name=HGK48_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04860 NZ_JAATTN010000077.1 Protein Homology CDS 496 1107 . - 0 ID=cds-WP_002850209.1;Parent=gene-HGK48_RS04860;Dbxref=GenBank:WP_002850209.1;Name=WP_002850209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732177.1;locus_tag=HGK48_RS04860;product=lysophospholipid acyltransferase family protein;protein_id=WP_002850209.1;transl_table=11 NZ_JAATTN010000077.1 RefSeq gene 1091 2395 . - . ID=gene-HGK48_RS04865;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=HGK48_RS04865 NZ_JAATTN010000077.1 Protein Homology CDS 1091 2395 . - 0 ID=cds-WP_002850213.1;Parent=gene-HGK48_RS04865;Dbxref=GenBank:WP_002850213.1;Name=WP_002850213.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732178.1;locus_tag=HGK48_RS04865;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_002850213.1;transl_table=11 NZ_JAATTN010000077.1 RefSeq gene 2392 2634 . - . ID=gene-HGK48_RS04870;Name=HGK48_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04870 NZ_JAATTN010000077.1 Protein Homology CDS 2392 2634 . - 0 ID=cds-WP_002850216.1;Parent=gene-HGK48_RS04870;Dbxref=GenBank:WP_002850216.1;Name=WP_002850216.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851103.1;locus_tag=HGK48_RS04870;product=HP0268 family nuclease;protein_id=WP_002850216.1;transl_table=11 NZ_JAATTN010000077.1 RefSeq gene 2836 3933 . + . ID=gene-HGK48_RS04875;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=HGK48_RS04875 NZ_JAATTN010000077.1 Protein Homology CDS 2836 3933 . + 0 ID=cds-WP_002850218.1;Parent=gene-HGK48_RS04875;Dbxref=GenBank:WP_002850218.1;Name=WP_002850218.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002949976.1;locus_tag=HGK48_RS04875;product=transcription termination factor NusA;protein_id=WP_002850218.1;transl_table=11 NZ_JAATTN010000077.1 RefSeq gene 3988 4566 . - . ID=gene-HGK48_RS04880;Name=pglD;gbkey=Gene;gene=pglD;gene_biotype=protein_coding;locus_tag=HGK48_RS04880 NZ_JAATTN010000077.1 Protein Homology CDS 3988 4566 . - 0 ID=cds-WP_002850220.1;Parent=gene-HGK48_RS04880;Dbxref=GenBank:WP_002850220.1;Name=WP_002850220.1;gbkey=CDS;gene=pglD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_038453984.1;locus_tag=HGK48_RS04880;product=UDP-N-acetylbacillosamine N-acetyltransferase;protein_id=WP_002850220.1;transl_table=11 NZ_JAATTN010000077.1 RefSeq gene 4575 5180 . - . ID=gene-HGK48_RS04885;Name=pglC;gbkey=Gene;gene=pglC;gene_biotype=protein_coding;locus_tag=HGK48_RS04885 NZ_JAATTN010000077.1 Protein Homology CDS 4575 5180 . - 0 ID=cds-WP_002850222.1;Parent=gene-HGK48_RS04885;Dbxref=GenBank:WP_002850222.1;Name=WP_002850222.1;gbkey=CDS;gene=pglC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_038453985.1;locus_tag=HGK48_RS04885;product=undecaprenyl phosphate N%2CN'-diacetylbacillosamine 1-phosphate transferase;protein_id=WP_002850222.1;transl_table=11 NZ_JAATTN010000077.1 RefSeq gene 5173 6285 . - . ID=gene-HGK48_RS04890;Name=pglA;gbkey=Gene;gene=pglA;gene_biotype=protein_coding;locus_tag=HGK48_RS04890 NZ_JAATTN010000077.1 Protein Homology CDS 5173 6285 . - 0 ID=cds-WP_011732180.1;Parent=gene-HGK48_RS04890;Dbxref=GenBank:WP_011732180.1;Name=WP_011732180.1;gbkey=CDS;gene=pglA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_065842313.1;locus_tag=HGK48_RS04890;product=N%2CN'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1%2C3-N-acetylgalactosaminyltransferase;protein_id=WP_011732180.1;transl_table=11 NZ_JAATTN010000077.1 RefSeq pseudogene 6290 6518 . - . ID=gene-HGK48_RS04895;Name=HGK48_RS04895;end_range=6518,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS04895;partial=true;pseudo=true NZ_JAATTN010000077.1 Protein Homology CDS 6290 6518 . - 1 ID=cds-HGK48_RS04895;Parent=gene-HGK48_RS04895;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732181.1;locus_tag=HGK48_RS04895;partial=true;product=STT3 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000078.1 1 6390 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000078.1 RefSeq region 1 6390 . + . ID=NZ_JAATTN010000078.1:1..6390;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000078.1 RefSeq pseudogene 1 300 . - . ID=gene-HGK48_RS04900;Name=HGK48_RS04900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS04900;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000078.1 GeneMarkS-2+ CDS 1 300 . - 0 ID=cds-HGK48_RS04900;Parent=gene-HGK48_RS04900;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04900;partial=true;product=glycosyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000078.1 RefSeq gene 297 1349 . - . ID=gene-HGK48_RS04905;Name=HGK48_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04905 NZ_JAATTN010000078.1 Protein Homology CDS 297 1349 . - 0 ID=cds-WP_025370383.1;Parent=gene-HGK48_RS04905;Dbxref=GenBank:WP_025370383.1;Name=WP_025370383.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732183.1;locus_tag=HGK48_RS04905;product=glycosyltransferase;protein_id=WP_025370383.1;transl_table=11 NZ_JAATTN010000078.1 RefSeq gene 1366 2880 . - . ID=gene-HGK48_RS04910;Name=HGK48_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04910 NZ_JAATTN010000078.1 Protein Homology CDS 1366 2880 . - 0 ID=cds-WP_002850234.1;Parent=gene-HGK48_RS04910;Dbxref=GenBank:WP_002850234.1;Name=WP_002850234.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850234.1;locus_tag=HGK48_RS04910;product=oligosaccharide flippase family protein;protein_id=WP_002850234.1;transl_table=11 NZ_JAATTN010000078.1 RefSeq gene 3035 4363 . - . ID=gene-HGK48_RS04915;Name=HGK48_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04915 NZ_JAATTN010000078.1 Protein Homology CDS 3035 4363 . - 0 ID=cds-WP_002850237.1;Parent=gene-HGK48_RS04915;Dbxref=GenBank:WP_002850237.1;Name=WP_002850237.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850237.1;locus_tag=HGK48_RS04915;product=UDP-glucose dehydrogenase family protein;protein_id=WP_002850237.1;transl_table=11 NZ_JAATTN010000078.1 RefSeq gene 4452 5453 . + . ID=gene-HGK48_RS04920;Name=HGK48_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04920 NZ_JAATTN010000078.1 Protein Homology CDS 4452 5453 . + 0 ID=cds-WP_002850239.1;Parent=gene-HGK48_RS04920;Dbxref=GenBank:WP_002850239.1;Name=WP_002850239.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083879.1;locus_tag=HGK48_RS04920;product=glycosyltransferase family 2 protein;protein_id=WP_002850239.1;transl_table=11 NZ_JAATTN010000078.1 RefSeq gene 5458 6390 . + . ID=gene-HGK48_RS04925;Name=HGK48_RS04925;end_range=6390,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04925;partial=true NZ_JAATTN010000078.1 Protein Homology CDS 5458 6390 . + 0 ID=cds-WP_168236718.1;Parent=gene-HGK48_RS04925;Dbxref=GenBank:WP_168236718.1;Name=WP_168236718.1;end_range=6390,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025622.6;locus_tag=HGK48_RS04925;partial=true;product=glucosyltransferase domain-containing protein;protein_id=WP_168236718.1;transl_table=11 ##sequence-region NZ_JAATTN010000079.1 1 6401 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000079.1 RefSeq region 1 6401 . + . ID=NZ_JAATTN010000079.1:1..6401;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000079.1 RefSeq gene 1 2650 . + . ID=gene-HGK48_RS04930;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=HGK48_RS04930;partial=true;start_range=.,1 NZ_JAATTN010000079.1 Protein Homology CDS 1 2650 . + 1 ID=cds-WP_168236719.1;Parent=gene-HGK48_RS04930;Dbxref=GenBank:WP_168236719.1;Name=WP_168236719.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848599.1;locus_tag=HGK48_RS04930;partial=true;product=cytochrome c biogenesis protein;protein_id=WP_168236719.1;start_range=.,1;transl_table=11 NZ_JAATTN010000079.1 RefSeq gene 2717 3157 . + . ID=gene-HGK48_RS04935;Name=HGK48_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04935 NZ_JAATTN010000079.1 GeneMarkS-2+ CDS 2717 3157 . + 0 ID=cds-WP_002848601.1;Parent=gene-HGK48_RS04935;Dbxref=GenBank:WP_002848601.1;Name=WP_002848601.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS04935;product=hypothetical protein;protein_id=WP_002848601.1;transl_table=11 NZ_JAATTN010000079.1 RefSeq gene 3147 3599 . - . ID=gene-HGK48_RS04940;Name=HGK48_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04940 NZ_JAATTN010000079.1 Protein Homology CDS 3147 3599 . - 0 ID=cds-WP_002848603.1;Parent=gene-HGK48_RS04940;Dbxref=GenBank:WP_002848603.1;Name=WP_002848603.1;Ontology_term=GO:0006644,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=phospholipid metabolic process|0006644||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731804.1;locus_tag=HGK48_RS04940;product=phosphatidylglycerophosphatase A family protein;protein_id=WP_002848603.1;transl_table=11 NZ_JAATTN010000079.1 RefSeq gene 3620 4798 . - . ID=gene-HGK48_RS04945;Name=HGK48_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04945 NZ_JAATTN010000079.1 Protein Homology CDS 3620 4798 . - 0 ID=cds-WP_024305380.1;Parent=gene-HGK48_RS04945;Dbxref=GenBank:WP_024305380.1;Name=WP_024305380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002944399.1;locus_tag=HGK48_RS04945;product=sulfate adenylyltransferase;protein_id=WP_024305380.1;transl_table=11 NZ_JAATTN010000079.1 RefSeq gene 4776 5666 . - . ID=gene-HGK48_RS04950;Name=HGK48_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04950 NZ_JAATTN010000079.1 Protein Homology CDS 4776 5666 . - 0 ID=cds-WP_024305381.1;Parent=gene-HGK48_RS04950;Dbxref=GenBank:WP_024305381.1;Name=WP_024305381.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002909858.1;locus_tag=HGK48_RS04950;product=response regulator;protein_id=WP_024305381.1;transl_table=11 NZ_JAATTN010000079.1 RefSeq gene 5663 6401 . - . ID=gene-HGK48_RS04955;Name=ispF;end_range=6401,.;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=HGK48_RS04955;partial=true NZ_JAATTN010000079.1 Protein Homology CDS 5663 6401 . - 1 ID=cds-WP_168236720.1;Parent=gene-HGK48_RS04955;Dbxref=GenBank:WP_168236720.1;Name=WP_168236720.1;Ontology_term=GO:0019288,GO:0008685;end_range=6401,.;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848609.1;locus_tag=HGK48_RS04955;partial=true;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_168236720.1;transl_table=11 ##sequence-region NZ_JAATTN010000007.1 1 19712 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000007.1 RefSeq region 1 19712 . + . ID=NZ_JAATTN010000007.1:1..19712;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000007.1 RefSeq gene 1 75 . + . ID=gene-HGK48_RS00830;Name=HGK48_RS00830;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS00830 NZ_JAATTN010000007.1 tRNAscan-SE tRNA 1 75 . + . ID=rna-HGK48_RS00830;Parent=gene-HGK48_RS00830;anticodon=(pos:33..35);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS00830;product=tRNA-Asn NZ_JAATTN010000007.1 tRNAscan-SE exon 1 75 . + . ID=exon-HGK48_RS00830-1;Parent=rna-HGK48_RS00830;anticodon=(pos:33..35);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS00830;product=tRNA-Asn NZ_JAATTN010000007.1 RefSeq gene 195 524 . + . ID=gene-HGK48_RS00835;Name=HGK48_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00835 NZ_JAATTN010000007.1 Protein Homology CDS 195 524 . + 0 ID=cds-WP_010396050.1;Parent=gene-HGK48_RS00835;Dbxref=GenBank:WP_010396050.1;Name=WP_010396050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010396050.1;locus_tag=HGK48_RS00835;product=hypothetical protein;protein_id=WP_010396050.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 529 846 . + . ID=gene-HGK48_RS00840;Name=HGK48_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00840 NZ_JAATTN010000007.1 GeneMarkS-2+ CDS 529 846 . + 0 ID=cds-WP_002848236.1;Parent=gene-HGK48_RS00840;Dbxref=GenBank:WP_002848236.1;Name=WP_002848236.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00840;product=hypothetical protein;protein_id=WP_002848236.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 903 1646 . + . ID=gene-HGK48_RS00845;Name=HGK48_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00845 NZ_JAATTN010000007.1 Protein Homology CDS 903 1646 . + 0 ID=cds-WP_002848237.1;Parent=gene-HGK48_RS00845;Dbxref=GenBank:WP_002848237.1;Name=WP_002848237.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848237.1;locus_tag=HGK48_RS00845;product=phosphatidate cytidylyltransferase;protein_id=WP_002848237.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 1643 2725 . + . ID=gene-HGK48_RS00850;Name=HGK48_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00850 NZ_JAATTN010000007.1 Protein Homology CDS 1643 2725 . + 0 ID=cds-WP_002848238.1;Parent=gene-HGK48_RS00850;Dbxref=GenBank:WP_002848238.1;Name=WP_002848238.1;Ontology_term=GO:0019288,GO:0030554,GO:0030604,GO:0046872;gbkey=CDS;go_function=adenyl nucleotide binding|0030554||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848238.1;locus_tag=HGK48_RS00850;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_002848238.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 2725 3357 . + . ID=gene-HGK48_RS00855;Name=HGK48_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00855 NZ_JAATTN010000007.1 Protein Homology CDS 2725 3357 . + 0 ID=cds-WP_011731738.1;Parent=gene-HGK48_RS00855;Dbxref=GenBank:WP_011731738.1;Name=WP_011731738.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731738.1;locus_tag=HGK48_RS00855;product=DNA-3-methyladenine glycosylase I;protein_id=WP_011731738.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 3347 4600 . + . ID=gene-HGK48_RS00860;Name=HGK48_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00860 NZ_JAATTN010000007.1 Protein Homology CDS 3347 4600 . + 0 ID=cds-WP_002848243.1;Parent=gene-HGK48_RS00860;Dbxref=GenBank:WP_002848243.1;Name=WP_002848243.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848243.1;locus_tag=HGK48_RS00860;product=uracil-xanthine permease family protein;protein_id=WP_002848243.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 4604 5341 . + . ID=gene-HGK48_RS00865;Name=HGK48_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00865 NZ_JAATTN010000007.1 Protein Homology CDS 4604 5341 . + 0 ID=cds-WP_011731740.1;Parent=gene-HGK48_RS00865;Dbxref=GenBank:WP_011731740.1;Name=WP_011731740.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012857998.1;locus_tag=HGK48_RS00865;product=M15 family metallopeptidase;protein_id=WP_011731740.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 5325 6674 . + . ID=gene-HGK48_RS00870;Name=HGK48_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00870 NZ_JAATTN010000007.1 Protein Homology CDS 5325 6674 . + 0 ID=cds-WP_024305309.1;Parent=gene-HGK48_RS00870;Dbxref=GenBank:WP_024305309.1;Name=WP_024305309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009650852.1;locus_tag=HGK48_RS00870;product=M99 family carboxypeptidase catalytic domain-containing protein;protein_id=WP_024305309.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 6671 7678 . + . ID=gene-HGK48_RS00875;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=HGK48_RS00875 NZ_JAATTN010000007.1 Protein Homology CDS 6671 7678 . + 0 ID=cds-WP_010401903.1;Parent=gene-HGK48_RS00875;Dbxref=GenBank:WP_010401903.1;Name=WP_010401903.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010401903.1;locus_tag=HGK48_RS00875;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_010401903.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 7741 10077 . + . ID=gene-HGK48_RS00880;Name=HGK48_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00880 NZ_JAATTN010000007.1 Protein Homology CDS 7741 10077 . + 0 ID=cds-WP_002848256.1;Parent=gene-HGK48_RS00880;Dbxref=GenBank:WP_002848256.1;Name=WP_002848256.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF048783.1;locus_tag=HGK48_RS00880;product=tetratricopeptide repeat protein;protein_id=WP_002848256.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 10072 10974 . - . ID=gene-HGK48_RS00885;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=HGK48_RS00885 NZ_JAATTN010000007.1 Protein Homology CDS 10072 10974 . - 0 ID=cds-WP_002848258.1;Parent=gene-HGK48_RS00885;Dbxref=GenBank:WP_002848258.1;Name=WP_002848258.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848258.1;locus_tag=HGK48_RS00885;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_002848258.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 11059 11928 . + . ID=gene-HGK48_RS00890;Name=mqnP;gbkey=Gene;gene=mqnP;gene_biotype=protein_coding;locus_tag=HGK48_RS00890 NZ_JAATTN010000007.1 Protein Homology CDS 11059 11928 . + 0 ID=cds-WP_002848261.1;Parent=gene-HGK48_RS00890;Dbxref=GenBank:WP_002848261.1;Name=WP_002848261.1;gbkey=CDS;gene=mqnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848261.1;locus_tag=HGK48_RS00890;product=menaquinone biosynthesis prenyltransferase MqnP;protein_id=WP_002848261.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 11922 12425 . + . ID=gene-HGK48_RS00895;Name=HGK48_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00895 NZ_JAATTN010000007.1 GeneMarkS-2+ CDS 11922 12425 . + 0 ID=cds-WP_002848263.1;Parent=gene-HGK48_RS00895;Dbxref=GenBank:WP_002848263.1;Name=WP_002848263.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00895;product=hypothetical protein;protein_id=WP_002848263.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 12418 12942 . + . ID=gene-HGK48_RS00900;Name=HGK48_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00900 NZ_JAATTN010000007.1 Protein Homology CDS 12418 12942 . + 0 ID=cds-WP_011731743.1;Parent=gene-HGK48_RS00900;Dbxref=GenBank:WP_011731743.1;Name=WP_011731743.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039996.5;locus_tag=HGK48_RS00900;product=DUF6115 domain-containing protein;protein_id=WP_011731743.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 12942 13910 . + . ID=gene-HGK48_RS00905;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=HGK48_RS00905 NZ_JAATTN010000007.1 Protein Homology CDS 12942 13910 . + 0 ID=cds-WP_002848267.1;Parent=gene-HGK48_RS00905;Dbxref=GenBank:WP_002848267.1;Name=WP_002848267.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848267.1;locus_tag=HGK48_RS00905;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_002848267.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 13910 14635 . + . ID=gene-HGK48_RS00910;Name=HGK48_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00910 NZ_JAATTN010000007.1 Protein Homology CDS 13910 14635 . + 0 ID=cds-WP_002848269.1;Parent=gene-HGK48_RS00910;Dbxref=GenBank:WP_002848269.1;Name=WP_002848269.1;Ontology_term=GO:0000287,GO:0016840,GO:0051539,GO:1904047;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,carbon-nitrogen lyase activity|0016840||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848269.1;locus_tag=HGK48_RS00910;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_002848269.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 14709 15857 . - . ID=gene-HGK48_RS00915;Name=HGK48_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00915 NZ_JAATTN010000007.1 Protein Homology CDS 14709 15857 . - 0 ID=cds-WP_002848271.1;Parent=gene-HGK48_RS00915;Dbxref=GenBank:WP_002848271.1;Name=WP_002848271.1;Ontology_term=GO:0004022,GO:0018455,GO:0030554,GO:0046872;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,alcohol dehydrogenase [NAD(P)+] activity|0018455||IEA,adenyl nucleotide binding|0030554||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF051259.1;locus_tag=HGK48_RS00915;product=iron-containing alcohol dehydrogenase;protein_id=WP_002848271.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 15951 16532 . + . ID=gene-HGK48_RS00920;Name=HGK48_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00920 NZ_JAATTN010000007.1 Protein Homology CDS 15951 16532 . + 0 ID=cds-WP_002848273.1;Parent=gene-HGK48_RS00920;Dbxref=GenBank:WP_002848273.1;Name=WP_002848273.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848273.1;locus_tag=HGK48_RS00920;product=6-pyruvoyl trahydropterin synthase family protein;protein_id=WP_002848273.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 16532 16711 . + . ID=gene-HGK48_RS00925;Name=HGK48_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00925 NZ_JAATTN010000007.1 GeneMarkS-2+ CDS 16532 16711 . + 0 ID=cds-WP_168236629.1;Parent=gene-HGK48_RS00925;Dbxref=GenBank:WP_168236629.1;Name=WP_168236629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00925;product=hypothetical protein;protein_id=WP_168236629.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 16718 17125 . + . ID=gene-HGK48_RS00930;Name=HGK48_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00930 NZ_JAATTN010000007.1 GeneMarkS-2+ CDS 16718 17125 . + 0 ID=cds-WP_002848276.1;Parent=gene-HGK48_RS00930;Dbxref=GenBank:WP_002848276.1;Name=WP_002848276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00930;product=hypothetical protein;protein_id=WP_002848276.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 17122 17775 . + . ID=gene-HGK48_RS00935;Name=HGK48_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00935 NZ_JAATTN010000007.1 Protein Homology CDS 17122 17775 . + 0 ID=cds-WP_011731744.1;Parent=gene-HGK48_RS00935;Dbxref=GenBank:WP_011731744.1;Name=WP_011731744.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731744.1;locus_tag=HGK48_RS00935;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_011731744.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 17777 18103 . + . ID=gene-HGK48_RS00940;Name=HGK48_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00940 NZ_JAATTN010000007.1 GeneMarkS-2+ CDS 17777 18103 . + 0 ID=cds-WP_002848281.1;Parent=gene-HGK48_RS00940;Dbxref=GenBank:WP_002848281.1;Name=WP_002848281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS00940;product=hypothetical protein;protein_id=WP_002848281.1;transl_table=11 NZ_JAATTN010000007.1 RefSeq gene 18081 19712 . + . ID=gene-HGK48_RS00945;Name=HGK48_RS00945;end_range=19712,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00945;partial=true NZ_JAATTN010000007.1 Protein Homology CDS 18081 19712 . + 0 ID=cds-WP_277346415.1;Parent=gene-HGK48_RS00945;Dbxref=GenBank:WP_277346415.1;Name=WP_277346415.1;Ontology_term=GO:0003677,GO:0003824;end_range=19712,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848283.1;locus_tag=HGK48_RS00945;partial=true;product=5'-3' exonuclease H3TH domain-containing protein;protein_id=WP_277346415.1;transl_table=11 ##sequence-region NZ_JAATTN010000080.1 1 6369 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000080.1 RefSeq region 1 6369 . + . ID=NZ_JAATTN010000080.1:1..6369;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000080.1 RefSeq gene 62 907 . - . ID=gene-HGK48_RS04960;Name=HGK48_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04960 NZ_JAATTN010000080.1 Protein Homology CDS 62 907 . - 0 ID=cds-WP_002850546.1;Parent=gene-HGK48_RS04960;Dbxref=GenBank:WP_002850546.1;Name=WP_002850546.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850546.1;locus_tag=HGK48_RS04960;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_002850546.1;transl_table=11 NZ_JAATTN010000080.1 RefSeq gene 910 1692 . - . ID=gene-HGK48_RS04965;Name=HGK48_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04965 NZ_JAATTN010000080.1 Protein Homology CDS 910 1692 . - 0 ID=cds-WP_002850548.1;Parent=gene-HGK48_RS04965;Dbxref=GenBank:WP_002850548.1;Name=WP_002850548.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002952444.1;locus_tag=HGK48_RS04965;product=ParA family protein;protein_id=WP_002850548.1;transl_table=11 NZ_JAATTN010000080.1 RefSeq gene 1689 2324 . - . ID=gene-HGK48_RS04970;Name=HGK48_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS04970 NZ_JAATTN010000080.1 Protein Homology CDS 1689 2324 . - 0 ID=cds-WP_002850550.1;Parent=gene-HGK48_RS04970;Dbxref=GenBank:WP_002850550.1;Name=WP_002850550.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850550.1;locus_tag=HGK48_RS04970;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_002850550.1;transl_table=11 NZ_JAATTN010000080.1 RefSeq gene 2305 3219 . - . ID=gene-HGK48_RS04975;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=HGK48_RS04975 NZ_JAATTN010000080.1 Protein Homology CDS 2305 3219 . - 0 ID=cds-WP_002850551.1;Parent=gene-HGK48_RS04975;Dbxref=GenBank:WP_002850551.1;Name=WP_002850551.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850551.1;locus_tag=HGK48_RS04975;product=methionyl-tRNA formyltransferase;protein_id=WP_002850551.1;transl_table=11 NZ_JAATTN010000080.1 RefSeq gene 3216 3980 . - . ID=gene-HGK48_RS04980;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=HGK48_RS04980 NZ_JAATTN010000080.1 Protein Homology CDS 3216 3980 . - 0 ID=cds-WP_065840789.1;Parent=gene-HGK48_RS04980;Dbxref=GenBank:WP_065840789.1;Name=WP_065840789.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850552.1;locus_tag=HGK48_RS04980;product=glutamate 5-kinase;protein_id=WP_065840789.1;transl_table=11 NZ_JAATTN010000080.1 RefSeq gene 4146 5180 . - . ID=gene-HGK48_RS04985;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=HGK48_RS04985 NZ_JAATTN010000080.1 Protein Homology CDS 4146 5180 . - 0 ID=cds-WP_002850553.1;Parent=gene-HGK48_RS04985;Dbxref=GenBank:WP_002850553.1;Name=WP_002850553.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850553.1;locus_tag=HGK48_RS04985;product=GTPase ObgE;protein_id=WP_002850553.1;transl_table=11 NZ_JAATTN010000080.1 RefSeq gene 5266 5523 . - . ID=gene-HGK48_RS04990;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=HGK48_RS04990 NZ_JAATTN010000080.1 Protein Homology CDS 5266 5523 . - 0 ID=cds-WP_002850554.1;Parent=gene-HGK48_RS04990;Dbxref=GenBank:WP_002850554.1;Name=WP_002850554.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850554.1;locus_tag=HGK48_RS04990;product=50S ribosomal protein L27;protein_id=WP_002850554.1;transl_table=11 NZ_JAATTN010000080.1 RefSeq gene 5534 5842 . - . ID=gene-HGK48_RS04995;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=HGK48_RS04995 NZ_JAATTN010000080.1 Protein Homology CDS 5534 5842 . - 0 ID=cds-WP_010402549.1;Parent=gene-HGK48_RS04995;Dbxref=GenBank:WP_010402549.1;Name=WP_010402549.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343554.1;locus_tag=HGK48_RS04995;product=50S ribosomal protein L21;protein_id=WP_010402549.1;transl_table=11 NZ_JAATTN010000080.1 RefSeq pseudogene 6051 6302 . - . ID=gene-HGK48_RS05000;Name=HGK48_RS05000;end_range=6302,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS05000;partial=true;pseudo=true NZ_JAATTN010000080.1 Protein Homology CDS 6051 6302 . - 0 ID=cds-HGK48_RS05000;Parent=gene-HGK48_RS05000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6302,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343796.1;locus_tag=HGK48_RS05000;partial=true;product=cytochrome-c peroxidase;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000081.1 1 6265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000081.1 RefSeq region 1 6265 . + . ID=NZ_JAATTN010000081.1:1..6265;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000081.1 RefSeq gene 1 1250 . - . ID=gene-HGK48_RS05005;Name=HGK48_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05005;partial=true;start_range=.,1 NZ_JAATTN010000081.1 Protein Homology CDS 1 1250 . - 0 ID=cds-WP_240944812.1;Parent=gene-HGK48_RS05005;Dbxref=GenBank:WP_240944812.1;Name=WP_240944812.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014581.6;locus_tag=HGK48_RS05005;partial=true;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_240944812.1;start_range=.,1;transl_table=11 NZ_JAATTN010000081.1 RefSeq gene 1253 2062 . - . ID=gene-HGK48_RS05010;Name=HGK48_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05010 NZ_JAATTN010000081.1 GeneMarkS-2+ CDS 1253 2062 . - 0 ID=cds-WP_035170851.1;Parent=gene-HGK48_RS05010;Dbxref=GenBank:WP_035170851.1;Name=WP_035170851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05010;product=hypothetical protein;protein_id=WP_035170851.1;transl_table=11 NZ_JAATTN010000081.1 RefSeq gene 2159 3409 . - . ID=gene-HGK48_RS05015;Name=HGK48_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05015 NZ_JAATTN010000081.1 GeneMarkS-2+ CDS 2159 3409 . - 0 ID=cds-WP_035170853.1;Parent=gene-HGK48_RS05015;Dbxref=GenBank:WP_035170853.1;Name=WP_035170853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05015;product=coiled-coil domain-containing 22 family protein;protein_id=WP_035170853.1;transl_table=11 NZ_JAATTN010000081.1 RefSeq gene 3399 3605 . - . ID=gene-HGK48_RS05020;Name=HGK48_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05020 NZ_JAATTN010000081.1 Protein Homology CDS 3399 3605 . - 0 ID=cds-WP_035170855.1;Parent=gene-HGK48_RS05020;Dbxref=GenBank:WP_035170855.1;Name=WP_035170855.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024139.6;locus_tag=HGK48_RS05020;product=helix-turn-helix domain-containing protein;protein_id=WP_035170855.1;transl_table=11 NZ_JAATTN010000081.1 RefSeq gene 3608 4033 . - . ID=gene-HGK48_RS05025;Name=HGK48_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05025 NZ_JAATTN010000081.1 Protein Homology CDS 3608 4033 . - 0 ID=cds-WP_035170857.1;Parent=gene-HGK48_RS05025;Dbxref=GenBank:WP_035170857.1;Name=WP_035170857.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024517.6;locus_tag=HGK48_RS05025;product=cag pathogenicity island Cag12 family protein;protein_id=WP_035170857.1;transl_table=11 NZ_JAATTN010000081.1 RefSeq gene 4125 5123 . - . ID=gene-HGK48_RS05030;Name=HGK48_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05030 NZ_JAATTN010000081.1 Protein Homology CDS 4125 5123 . - 0 ID=cds-WP_035170859.1;Parent=gene-HGK48_RS05030;Dbxref=GenBank:WP_035170859.1;Name=WP_035170859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849956.1;locus_tag=HGK48_RS05030;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_035170859.1;transl_table=11 NZ_JAATTN010000081.1 RefSeq gene 5120 6265 . - . ID=gene-HGK48_RS05035;Name=virB10;end_range=6265,.;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=HGK48_RS05035;partial=true NZ_JAATTN010000081.1 Protein Homology CDS 5120 6265 . - 0 ID=cds-WP_168236721.1;Parent=gene-HGK48_RS05035;Dbxref=GenBank:WP_168236721.1;Name=WP_168236721.1;end_range=6265,.;gbkey=CDS;gene=virB10;inference=COORDINATES: protein motif:HMM:NF038091.1;locus_tag=HGK48_RS05035;partial=true;product=type IV secretion system protein VirB10;protein_id=WP_168236721.1;transl_table=11 ##sequence-region NZ_JAATTN010000082.1 1 6302 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000082.1 RefSeq region 1 6302 . + . ID=NZ_JAATTN010000082.1:1..6302;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000082.1 RefSeq gene 1 2774 . - . ID=gene-HGK48_RS05040;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=HGK48_RS05040;partial=true;start_range=.,1 NZ_JAATTN010000082.1 Protein Homology CDS 1 2774 . - 0 ID=cds-WP_168236723.1;Parent=gene-HGK48_RS05040;Dbxref=GenBank:WP_168236723.1;Name=WP_168236723.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343780.1;locus_tag=HGK48_RS05040;partial=true;product=excinuclease ABC subunit UvrA;protein_id=WP_168236723.1;start_range=.,1;transl_table=11 NZ_JAATTN010000082.1 RefSeq gene 3011 4669 . + . ID=gene-HGK48_RS05045;Name=HGK48_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05045 NZ_JAATTN010000082.1 Protein Homology CDS 3011 4669 . + 0 ID=cds-WP_002848474.1;Parent=gene-HGK48_RS05045;Dbxref=GenBank:WP_002848474.1;Name=WP_002848474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848474.1;locus_tag=HGK48_RS05045;product=SLC13 family permease;protein_id=WP_002848474.1;transl_table=11 NZ_JAATTN010000082.1 RefSeq gene 4692 5435 . - . ID=gene-HGK48_RS05050;Name=HGK48_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05050 NZ_JAATTN010000082.1 Protein Homology CDS 4692 5435 . - 0 ID=cds-WP_002848478.1;Parent=gene-HGK48_RS05050;Dbxref=GenBank:WP_002848478.1;Name=WP_002848478.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848478.1;locus_tag=HGK48_RS05050;product=sulfite exporter TauE/SafE family protein;protein_id=WP_002848478.1;transl_table=11 NZ_JAATTN010000082.1 RefSeq gene 5457 6185 . - . ID=gene-HGK48_RS05055;Name=HGK48_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05055 NZ_JAATTN010000082.1 Protein Homology CDS 5457 6185 . - 0 ID=cds-WP_002848487.1;Parent=gene-HGK48_RS05055;Dbxref=GenBank:WP_002848487.1;Name=WP_002848487.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848487.1;locus_tag=HGK48_RS05055;product=sulfite exporter TauE/SafE family protein;protein_id=WP_002848487.1;transl_table=11 ##sequence-region NZ_JAATTN010000083.1 1 6270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000083.1 RefSeq region 1 6270 . + . ID=NZ_JAATTN010000083.1:1..6270;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000083.1 RefSeq gene 43 486 . + . ID=gene-HGK48_RS05060;Name=HGK48_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05060 NZ_JAATTN010000083.1 Protein Homology CDS 43 486 . + 0 ID=cds-WP_168236724.1;Parent=gene-HGK48_RS05060;Dbxref=GenBank:WP_168236724.1;Name=WP_168236724.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013648.6;locus_tag=HGK48_RS05060;product=ABC transporter substrate-binding protein;protein_id=WP_168236724.1;transl_table=11 NZ_JAATTN010000083.1 RefSeq gene 467 1447 . + . ID=gene-HGK48_RS05065;Name=HGK48_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05065 NZ_JAATTN010000083.1 Protein Homology CDS 467 1447 . + 0 ID=cds-WP_011732117.1;Parent=gene-HGK48_RS05065;Dbxref=GenBank:WP_011732117.1;Name=WP_011732117.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732117.1;locus_tag=HGK48_RS05065;product=FecCD family ABC transporter permease;protein_id=WP_011732117.1;transl_table=11 NZ_JAATTN010000083.1 RefSeq gene 1438 2211 . + . ID=gene-HGK48_RS05070;Name=HGK48_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05070 NZ_JAATTN010000083.1 Protein Homology CDS 1438 2211 . + 0 ID=cds-WP_002849862.1;Parent=gene-HGK48_RS05070;Dbxref=GenBank:WP_002849862.1;Name=WP_002849862.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849862.1;locus_tag=HGK48_RS05070;product=ABC transporter ATP-binding protein;protein_id=WP_002849862.1;transl_table=11 NZ_JAATTN010000083.1 RefSeq gene 2299 2832 . + . ID=gene-HGK48_RS05075;Name=HGK48_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05075 NZ_JAATTN010000083.1 GeneMarkS-2+ CDS 2299 2832 . + 0 ID=cds-WP_002849861.1;Parent=gene-HGK48_RS05075;Dbxref=GenBank:WP_002849861.1;Name=WP_002849861.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05075;product=hypothetical protein;protein_id=WP_002849861.1;transl_table=11 NZ_JAATTN010000083.1 RefSeq gene 2881 3324 . + . ID=gene-HGK48_RS05080;Name=HGK48_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05080 NZ_JAATTN010000083.1 Protein Homology CDS 2881 3324 . + 0 ID=cds-WP_002849860.1;Parent=gene-HGK48_RS05080;Dbxref=GenBank:WP_002849860.1;Name=WP_002849860.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849860.1;locus_tag=HGK48_RS05080;product=GNAT family N-acetyltransferase;protein_id=WP_002849860.1;transl_table=11 NZ_JAATTN010000083.1 RefSeq gene 3386 3904 . - . ID=gene-HGK48_RS05085;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=HGK48_RS05085 NZ_JAATTN010000083.1 Protein Homology CDS 3386 3904 . - 0 ID=cds-WP_002849859.1;Parent=gene-HGK48_RS05085;Dbxref=GenBank:WP_002849859.1;Name=WP_002849859.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344067.1;locus_tag=HGK48_RS05085;product=inorganic diphosphatase;protein_id=WP_002849859.1;transl_table=11 NZ_JAATTN010000083.1 RefSeq gene 3909 4484 . - . ID=gene-HGK48_RS05090;Name=HGK48_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05090 NZ_JAATTN010000083.1 Protein Homology CDS 3909 4484 . - 0 ID=cds-WP_002849858.1;Parent=gene-HGK48_RS05090;Dbxref=GenBank:WP_002849858.1;Name=WP_002849858.1;Ontology_term=GO:0006139,GO:0019205;gbkey=CDS;go_function=nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849858.1;locus_tag=HGK48_RS05090;product=adenylate kinase;protein_id=WP_002849858.1;transl_table=11 NZ_JAATTN010000083.1 RefSeq gene 4481 6235 . - . ID=gene-HGK48_RS05095;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=HGK48_RS05095 NZ_JAATTN010000083.1 Protein Homology CDS 4481 6235 . - 0 ID=cds-WP_002849857.1;Parent=gene-HGK48_RS05095;Dbxref=GenBank:WP_002849857.1;Name=WP_002849857.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012108181.1;locus_tag=HGK48_RS05095;product=aspartate--tRNA ligase;protein_id=WP_002849857.1;transl_table=11 ##sequence-region NZ_JAATTN010000084.1 1 6155 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000084.1 RefSeq region 1 6155 . + . ID=NZ_JAATTN010000084.1:1..6155;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000084.1 RefSeq pseudogene 1 355 . + . ID=gene-HGK48_RS05100;Name=HGK48_RS05100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS05100;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000084.1 Protein Homology CDS 1 355 . + 1 ID=cds-HGK48_RS05100;Parent=gene-HGK48_RS05100;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731876.1;locus_tag=HGK48_RS05100;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000084.1 RefSeq gene 342 1550 . + . ID=gene-HGK48_RS05105;Name=HGK48_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05105 NZ_JAATTN010000084.1 Protein Homology CDS 342 1550 . + 0 ID=cds-WP_024305455.1;Parent=gene-HGK48_RS05105;Dbxref=GenBank:WP_024305455.1;Name=WP_024305455.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF024629.6;locus_tag=HGK48_RS05105;product=ArnT family glycosyltransferase;protein_id=WP_024305455.1;transl_table=11 NZ_JAATTN010000084.1 RefSeq gene 1569 2240 . + . ID=gene-HGK48_RS05110;Name=HGK48_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05110 NZ_JAATTN010000084.1 Protein Homology CDS 1569 2240 . + 0 ID=cds-WP_002848975.1;Parent=gene-HGK48_RS05110;Dbxref=GenBank:WP_002848975.1;Name=WP_002848975.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019575.6;locus_tag=HGK48_RS05110;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_002848975.1;transl_table=11 NZ_JAATTN010000084.1 RefSeq gene 2243 3433 . - . ID=gene-HGK48_RS05115;Name=HGK48_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05115 NZ_JAATTN010000084.1 Protein Homology CDS 2243 3433 . - 0 ID=cds-WP_029662474.1;Parent=gene-HGK48_RS05115;Dbxref=GenBank:WP_029662474.1;Name=WP_029662474.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016646963.1;locus_tag=HGK48_RS05115;product=ABC transporter permease;protein_id=WP_029662474.1;transl_table=11 NZ_JAATTN010000084.1 RefSeq pseudogene 3435 5816 . - . ID=gene-HGK48_RS05120;Name=secA;end_range=5816,.;gbkey=Gene;gene=secA;gene_biotype=pseudogene;locus_tag=HGK48_RS05120;partial=true;pseudo=true NZ_JAATTN010000084.1 Protein Homology CDS 3435 5816 . - 0 ID=cds-HGK48_RS05120;Parent=gene-HGK48_RS05120;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;end_range=5816,.;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018136431.1;locus_tag=HGK48_RS05120;partial=true;product=preprotein translocase subunit SecA;pseudo=true;transl_table=11 NZ_JAATTN010000084.1 RefSeq gene 5934 6155 . + . ID=gene-HGK48_RS05125;Name=HGK48_RS05125;end_range=6155,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05125;partial=true NZ_JAATTN010000084.1 Protein Homology CDS 5934 6155 . + 0 ID=cds-WP_168236726.1;Parent=gene-HGK48_RS05125;Dbxref=GenBank:WP_168236726.1;Name=WP_168236726.1;end_range=6155,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848972.1;locus_tag=HGK48_RS05125;partial=true;product=hypothetical protein;protein_id=WP_168236726.1;transl_table=11 ##sequence-region NZ_JAATTN010000085.1 1 6231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000085.1 RefSeq region 1 6231 . + . ID=NZ_JAATTN010000085.1:1..6231;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000085.1 RefSeq gene 14 223 . - . ID=gene-HGK48_RS05130;Name=HGK48_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05130 NZ_JAATTN010000085.1 Protein Homology CDS 14 223 . - 0 ID=cds-WP_002849592.1;Parent=gene-HGK48_RS05130;Dbxref=GenBank:WP_002849592.1;Name=WP_002849592.1;Ontology_term=GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011989570.1;locus_tag=HGK48_RS05130;product=alkylphosphonate utilization protein;protein_id=WP_002849592.1;transl_table=11 NZ_JAATTN010000085.1 RefSeq gene 441 2978 . + . ID=gene-HGK48_RS05135;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=HGK48_RS05135 NZ_JAATTN010000085.1 Protein Homology CDS 441 2978 . + 0 ID=cds-WP_002849593.1;Parent=gene-HGK48_RS05135;Dbxref=GenBank:WP_002849593.1;Name=WP_002849593.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732051.1;locus_tag=HGK48_RS05135;product=alanine--tRNA ligase;protein_id=WP_002849593.1;transl_table=11 NZ_JAATTN010000085.1 RefSeq gene 2975 3469 . + . ID=gene-HGK48_RS05140;Name=HGK48_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05140 NZ_JAATTN010000085.1 GeneMarkS-2+ CDS 2975 3469 . + 0 ID=cds-WP_002849595.1;Parent=gene-HGK48_RS05140;Dbxref=GenBank:WP_002849595.1;Name=WP_002849595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05140;product=hypothetical protein;protein_id=WP_002849595.1;transl_table=11 NZ_JAATTN010000085.1 RefSeq gene 3469 4014 . + . ID=gene-HGK48_RS05145;Name=maf;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=HGK48_RS05145 NZ_JAATTN010000085.1 Protein Homology CDS 3469 4014 . + 0 ID=cds-WP_002849596.1;Parent=gene-HGK48_RS05145;Dbxref=GenBank:WP_002849596.1;Name=WP_002849596.1;Ontology_term=GO:0047429;gbkey=CDS;gene=maf;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849596.1;locus_tag=HGK48_RS05145;product=septum formation inhibitor Maf;protein_id=WP_002849596.1;transl_table=11 NZ_JAATTN010000085.1 RefSeq gene 4011 5948 . + . ID=gene-HGK48_RS05150;Name=HGK48_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05150 NZ_JAATTN010000085.1 Protein Homology CDS 4011 5948 . + 0 ID=cds-WP_002849597.1;Parent=gene-HGK48_RS05150;Dbxref=GenBank:WP_002849597.1;Name=WP_002849597.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0008955,GO:0016757;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,glycosyltransferase activity|0016757||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849597.1;locus_tag=HGK48_RS05150;product=transglycosylase domain-containing protein;protein_id=WP_002849597.1;transl_table=11 NZ_JAATTN010000085.1 RefSeq pseudogene 5950 6078 . - . ID=gene-HGK48_RS05155;Name=HGK48_RS05155;end_range=6078,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS05155;partial=true;pseudo=true NZ_JAATTN010000085.1 Protein Homology CDS 5950 6078 . - 0 ID=cds-HGK48_RS05155;Parent=gene-HGK48_RS05155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=6078,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849598.1;locus_tag=HGK48_RS05155;partial=true;product=cupin domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAATTN010000086.1 1 6198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000086.1 RefSeq region 1 6198 . + . ID=NZ_JAATTN010000086.1:1..6198;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000086.1 RefSeq pseudogene 1 368 . - . ID=gene-HGK48_RS05160;Name=HGK48_RS05160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS05160;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000086.1 Protein Homology CDS 1 368 . - 0 ID=cds-HGK48_RS05160;Parent=gene-HGK48_RS05160;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849360.1;locus_tag=HGK48_RS05160;partial=true;product=3'-5' exonuclease;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000086.1 RefSeq gene 381 1022 . - . ID=gene-HGK48_RS05165;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=HGK48_RS05165 NZ_JAATTN010000086.1 Protein Homology CDS 381 1022 . - 0 ID=cds-WP_002849359.1;Parent=gene-HGK48_RS05165;Dbxref=GenBank:WP_002849359.1;Name=WP_002849359.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849359.1;locus_tag=HGK48_RS05165;product=ribulose-phosphate 3-epimerase;protein_id=WP_002849359.1;transl_table=11 NZ_JAATTN010000086.1 RefSeq gene 1151 2263 . + . ID=gene-HGK48_RS05170;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=HGK48_RS05170 NZ_JAATTN010000086.1 Protein Homology CDS 1151 2263 . + 0 ID=cds-WP_002849358.1;Parent=gene-HGK48_RS05170;Dbxref=GenBank:WP_002849358.1;Name=WP_002849358.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731978.1;locus_tag=HGK48_RS05170;product=RIP metalloprotease RseP;protein_id=WP_002849358.1;transl_table=11 NZ_JAATTN010000086.1 RefSeq gene 2260 2877 . + . ID=gene-HGK48_RS05175;Name=HGK48_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05175 NZ_JAATTN010000086.1 Protein Homology CDS 2260 2877 . + 0 ID=cds-WP_002849357.1;Parent=gene-HGK48_RS05175;Dbxref=GenBank:WP_002849357.1;Name=WP_002849357.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849357.1;locus_tag=HGK48_RS05175;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_002849357.1;transl_table=11 NZ_JAATTN010000086.1 RefSeq gene 3133 3663 . - . ID=gene-HGK48_RS05180;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=HGK48_RS05180 NZ_JAATTN010000086.1 Protein Homology CDS 3133 3663 . - 0 ID=cds-WP_002849356.1;Parent=gene-HGK48_RS05180;Dbxref=GenBank:WP_002849356.1;Name=WP_002849356.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849356.1;locus_tag=HGK48_RS05180;product=molybdopterin adenylyltransferase;protein_id=WP_002849356.1;transl_table=11 NZ_JAATTN010000086.1 RefSeq gene 3653 5323 . - . ID=gene-HGK48_RS05185;Name=HGK48_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05185 NZ_JAATTN010000086.1 Protein Homology CDS 3653 5323 . - 0 ID=cds-WP_002849355.1;Parent=gene-HGK48_RS05185;Dbxref=GenBank:WP_002849355.1;Name=WP_002849355.1;Ontology_term=GO:0004176,GO:0004222,GO:0005524,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA,ATP binding|0005524||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849355.1;locus_tag=HGK48_RS05185;product=ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein;protein_id=WP_002849355.1;transl_table=11 NZ_JAATTN010000086.1 RefSeq gene 5301 6198 . - . ID=gene-HGK48_RS05190;Name=HGK48_RS05190;end_range=6198,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05190;partial=true NZ_JAATTN010000086.1 Protein Homology CDS 5301 6198 . - 1 ID=cds-WP_168236727.1;Parent=gene-HGK48_RS05190;Dbxref=GenBank:WP_168236727.1;Name=WP_168236727.1;Ontology_term=GO:0003824,GO:0051539;end_range=6198,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002853846.1;locus_tag=HGK48_RS05190;partial=true;product=radical SAM protein;protein_id=WP_168236727.1;transl_table=11 ##sequence-region NZ_JAATTN010000087.1 1 6193 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000087.1 RefSeq region 1 6193 . + . ID=NZ_JAATTN010000087.1:1..6193;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000087.1 RefSeq gene 337 2157 . + . ID=gene-HGK48_RS05195;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=HGK48_RS05195 NZ_JAATTN010000087.1 Protein Homology CDS 337 2157 . + 0 ID=cds-WP_099032928.1;Parent=gene-HGK48_RS05195;Dbxref=GenBank:WP_099032928.1;Name=WP_099032928.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343664.1;locus_tag=HGK48_RS05195;product=threonine--tRNA ligase;protein_id=WP_099032928.1;transl_table=11 NZ_JAATTN010000087.1 RefSeq gene 2154 2672 . + . ID=gene-HGK48_RS05200;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=HGK48_RS05200 NZ_JAATTN010000087.1 Protein Homology CDS 2154 2672 . + 0 ID=cds-WP_002850783.1;Parent=gene-HGK48_RS05200;Dbxref=GenBank:WP_002850783.1;Name=WP_002850783.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009295104.1;locus_tag=HGK48_RS05200;product=translation initiation factor IF-3;protein_id=WP_002850783.1;transl_table=11 NZ_JAATTN010000087.1 RefSeq gene 2855 3232 . + . ID=gene-HGK48_RS05205;Name=HGK48_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05205 NZ_JAATTN010000087.1 Protein Homology CDS 2855 3232 . + 0 ID=cds-WP_002850781.1;Parent=gene-HGK48_RS05205;Dbxref=GenBank:WP_002850781.1;Name=WP_002850781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850781.1;locus_tag=HGK48_RS05205;product=NINE protein;protein_id=WP_002850781.1;transl_table=11 NZ_JAATTN010000087.1 RefSeq gene 3240 3533 . - . ID=gene-HGK48_RS11515;Name=HGK48_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11515 NZ_JAATTN010000087.1 GeneMarkS-2+ CDS 3240 3533 . - 0 ID=cds-WP_046037282.1;Parent=gene-HGK48_RS11515;Dbxref=GenBank:WP_046037282.1;Name=WP_046037282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11515;product=hypothetical protein;protein_id=WP_046037282.1;transl_table=11 NZ_JAATTN010000087.1 RefSeq gene 3567 3791 . - . ID=gene-HGK48_RS11520;Name=HGK48_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11520 NZ_JAATTN010000087.1 Protein Homology CDS 3567 3791 . - 0 ID=cds-WP_046037281.1;Parent=gene-HGK48_RS11520;Dbxref=GenBank:WP_046037281.1;Name=WP_046037281.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:TIGR02481.1;locus_tag=HGK48_RS11520;product=hemerythrin domain-containing protein;protein_id=WP_046037281.1;transl_table=11 NZ_JAATTN010000087.1 RefSeq gene 3952 4542 . - . ID=gene-HGK48_RS11200;Name=HGK48_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11200 NZ_JAATTN010000087.1 Protein Homology CDS 3952 4542 . - 0 ID=cds-WP_050981981.1;Parent=gene-HGK48_RS11200;Dbxref=GenBank:WP_050981981.1;Name=WP_050981981.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=HGK48_RS11200;product=methyl-accepting chemotaxis protein;protein_id=WP_050981981.1;transl_table=11 NZ_JAATTN010000087.1 RefSeq gene 4659 5912 . - . ID=gene-HGK48_RS11205;Name=HGK48_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11205 NZ_JAATTN010000087.1 Protein Homology CDS 4659 5912 . - 0 ID=cds-WP_051119558.1;Parent=gene-HGK48_RS11205;Dbxref=GenBank:WP_051119558.1;Name=WP_051119558.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014763.6;locus_tag=HGK48_RS11205;product=PDC sensor domain-containing protein;protein_id=WP_051119558.1;transl_table=11 ##sequence-region NZ_JAATTN010000088.1 1 6178 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000088.1 RefSeq region 1 6178 . + . ID=NZ_JAATTN010000088.1:1..6178;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000088.1 RefSeq pseudogene 1 85 . - . ID=gene-HGK48_RS05220;Name=HGK48_RS05220;end_range=85,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS05220;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000088.1 Protein Homology CDS 1 85 . - 0 ID=cds-HGK48_RS05220;Parent=gene-HGK48_RS05220;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=85,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002344747.1;locus_tag=HGK48_RS05220;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000088.1 RefSeq pseudogene 91 1293 . + . ID=gene-HGK48_RS05225;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=pseudogene;locus_tag=HGK48_RS05225;partial=true;pseudo=true;start_range=.,91 NZ_JAATTN010000088.1 Protein Homology CDS 91 1293 . + 0 ID=cds-HGK48_RS05225;Parent=gene-HGK48_RS05225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002777784.1;locus_tag=HGK48_RS05225;partial=true;product=polyphosphate kinase 1;pseudo=true;start_range=.,91;transl_table=11 NZ_JAATTN010000088.1 RefSeq gene 2341 4596 . + . ID=gene-HGK48_RS05230;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=HGK48_RS05230 NZ_JAATTN010000088.1 Protein Homology CDS 2341 4596 . + 0 ID=cds-WP_011731988.1;Parent=gene-HGK48_RS05230;Dbxref=GenBank:WP_011731988.1;Name=WP_011731988.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011991661.1;locus_tag=HGK48_RS05230;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_011731988.1;transl_table=11 NZ_JAATTN010000088.1 RefSeq gene 4655 5548 . + . ID=gene-HGK48_RS05235;Name=HGK48_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05235 NZ_JAATTN010000088.1 Protein Homology CDS 4655 5548 . + 0 ID=cds-WP_002849385.1;Parent=gene-HGK48_RS05235;Dbxref=GenBank:WP_002849385.1;Name=WP_002849385.1;Ontology_term=GO:0006555,GO:0004489,GO:0050660;gbkey=CDS;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=methionine metabolic process|0006555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849385.1;locus_tag=HGK48_RS05235;product=methylenetetrahydrofolate reductase;protein_id=WP_002849385.1;transl_table=11 ##sequence-region NZ_JAATTN010000089.1 1 6166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000089.1 RefSeq region 1 6166 . + . ID=NZ_JAATTN010000089.1:1..6166;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000089.1 RefSeq gene 1 200 . - . ID=gene-HGK48_RS05240;Name=HGK48_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05240;partial=true;start_range=.,1 NZ_JAATTN010000089.1 Protein Homology CDS 1 200 . - 0 ID=cds-WP_240944814.1;Parent=gene-HGK48_RS05240;Dbxref=GenBank:WP_240944814.1;Name=WP_240944814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002851014.1;locus_tag=HGK48_RS05240;partial=true;product=TrbM/KikA/MpfK family conjugal transfer protein;protein_id=WP_240944814.1;start_range=.,1;transl_table=11 NZ_JAATTN010000089.1 RefSeq gene 197 751 . - . ID=gene-HGK48_RS05245;Name=HGK48_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05245 NZ_JAATTN010000089.1 Protein Homology CDS 197 751 . - 0 ID=cds-WP_065840844.1;Parent=gene-HGK48_RS05245;Dbxref=GenBank:WP_065840844.1;Name=WP_065840844.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF014548.6;locus_tag=HGK48_RS05245;product=BRO-N domain-containing protein;protein_id=WP_065840844.1;transl_table=11 NZ_JAATTN010000089.1 RefSeq gene 765 941 . - . ID=gene-HGK48_RS05250;Name=HGK48_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05250 NZ_JAATTN010000089.1 GeneMarkS-2+ CDS 765 941 . - 0 ID=cds-WP_158004914.1;Parent=gene-HGK48_RS05250;Dbxref=GenBank:WP_158004914.1;Name=WP_158004914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05250;product=BRO-N domain-containing protein;protein_id=WP_158004914.1;transl_table=11 NZ_JAATTN010000089.1 RefSeq gene 953 3397 . - . ID=gene-HGK48_RS05255;Name=HGK48_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05255 NZ_JAATTN010000089.1 Protein Homology CDS 953 3397 . - 0 ID=cds-WP_168236728.1;Parent=gene-HGK48_RS05255;Dbxref=GenBank:WP_168236728.1;Name=WP_168236728.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016647503.1;locus_tag=HGK48_RS05255;product=VirB4 family type IV secretion/conjugal transfer ATPase;protein_id=WP_168236728.1;transl_table=11 NZ_JAATTN010000089.1 RefSeq gene 3401 3691 . - . ID=gene-HGK48_RS05260;Name=trbD;gbkey=Gene;gene=trbD;gene_biotype=protein_coding;locus_tag=HGK48_RS05260 NZ_JAATTN010000089.1 Protein Homology CDS 3401 3691 . - 0 ID=cds-WP_059427758.1;Parent=gene-HGK48_RS05260;Dbxref=GenBank:WP_059427758.1;Name=WP_059427758.1;gbkey=CDS;gene=trbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016647502.1;locus_tag=HGK48_RS05260;product=conjugal transfer protein TrbD;protein_id=WP_059427758.1;transl_table=11 NZ_JAATTN010000089.1 RefSeq gene 3688 3981 . - . ID=gene-HGK48_RS05265;Name=HGK48_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05265 NZ_JAATTN010000089.1 Protein Homology CDS 3688 3981 . - 0 ID=cds-WP_059427759.1;Parent=gene-HGK48_RS05265;Dbxref=GenBank:WP_059427759.1;Name=WP_059427759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002784998.1;locus_tag=HGK48_RS05265;product=TrbC/VirB2 family protein;protein_id=WP_059427759.1;transl_table=11 NZ_JAATTN010000089.1 RefSeq gene 4002 4946 . - . ID=gene-HGK48_RS05270;Name=trbB;gbkey=Gene;gene=trbB;gene_biotype=protein_coding;locus_tag=HGK48_RS05270 NZ_JAATTN010000089.1 Protein Homology CDS 4002 4946 . - 0 ID=cds-WP_168236729.1;Parent=gene-HGK48_RS05270;Dbxref=GenBank:WP_168236729.1;Name=WP_168236729.1;Ontology_term=GO:0005524,GO:0005737;gbkey=CDS;gene=trbB;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016647500.1;locus_tag=HGK48_RS05270;product=P-type conjugative transfer ATPase TrbB;protein_id=WP_168236729.1;transl_table=11 NZ_JAATTN010000089.1 RefSeq gene 5269 5724 . + . ID=gene-HGK48_RS05275;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=HGK48_RS05275 NZ_JAATTN010000089.1 Protein Homology CDS 5269 5724 . + 0 ID=cds-WP_010404250.1;Parent=gene-HGK48_RS05275;Dbxref=GenBank:WP_010404250.1;Name=WP_010404250.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008353586.1;locus_tag=HGK48_RS05275;product=IS200/IS605 family transposase;protein_id=WP_010404250.1;transl_table=11 NZ_JAATTN010000089.1 RefSeq gene 5702 6046 . + . ID=gene-HGK48_RS05280;Name=HGK48_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05280 NZ_JAATTN010000089.1 GeneMarkS-2+ CDS 5702 6046 . + 0 ID=cds-WP_206120299.1;Parent=gene-HGK48_RS05280;Dbxref=GenBank:WP_206120299.1;Name=WP_206120299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05280;product=transposase;protein_id=WP_206120299.1;transl_table=11 ##sequence-region NZ_JAATTN010000008.1 1 19573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000008.1 RefSeq region 1 19573 . + . ID=NZ_JAATTN010000008.1:1..19573;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000008.1 RefSeq gene 1 517 . - . ID=gene-HGK48_RS00950;Name=HGK48_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00950;partial=true;start_range=.,1 NZ_JAATTN010000008.1 Protein Homology CDS 1 517 . - 0 ID=cds-WP_240944799.1;Parent=gene-HGK48_RS00950;Dbxref=GenBank:WP_240944799.1;Name=WP_240944799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732350.1;locus_tag=HGK48_RS00950;partial=true;product=nitroreductase family protein;protein_id=WP_240944799.1;start_range=.,1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 540 1055 . - . ID=gene-HGK48_RS00955;Name=HGK48_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00955 NZ_JAATTN010000008.1 Protein Homology CDS 540 1055 . - 0 ID=cds-WP_002847866.1;Parent=gene-HGK48_RS00955;Dbxref=GenBank:WP_002847866.1;Name=WP_002847866.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732351.1;locus_tag=HGK48_RS00955;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_002847866.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 1097 1948 . - . ID=gene-HGK48_RS00960;Name=HGK48_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00960 NZ_JAATTN010000008.1 Protein Homology CDS 1097 1948 . - 0 ID=cds-WP_231854846.1;Parent=gene-HGK48_RS00960;Dbxref=GenBank:WP_231854846.1;Name=WP_231854846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847868.1;locus_tag=HGK48_RS00960;product=HrgA protein;protein_id=WP_231854846.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 2009 3772 . - . ID=gene-HGK48_RS00965;Name=HGK48_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00965 NZ_JAATTN010000008.1 Protein Homology CDS 2009 3772 . - 0 ID=cds-WP_002847875.1;Parent=gene-HGK48_RS00965;Dbxref=GenBank:WP_002847875.1;Name=WP_002847875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847875.1;locus_tag=HGK48_RS00965;product=AIPR family protein;protein_id=WP_002847875.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 3799 4563 . - . ID=gene-HGK48_RS00970;Name=HGK48_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00970 NZ_JAATTN010000008.1 Protein Homology CDS 3799 4563 . - 0 ID=cds-WP_002847877.1;Parent=gene-HGK48_RS00970;Dbxref=GenBank:WP_002847877.1;Name=WP_002847877.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847877.1;locus_tag=HGK48_RS00970;product=pseudouridine synthase;protein_id=WP_002847877.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 4563 5516 . - . ID=gene-HGK48_RS00975;Name=HGK48_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00975 NZ_JAATTN010000008.1 Protein Homology CDS 4563 5516 . - 0 ID=cds-WP_002847879.1;Parent=gene-HGK48_RS00975;Dbxref=GenBank:WP_002847879.1;Name=WP_002847879.1;Ontology_term=GO:0005975,GO:0016853,GO:0046872,GO:0097367;gbkey=CDS;go_function=isomerase activity|0016853||IEA,metal ion binding|0046872||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847879.1;locus_tag=HGK48_RS00975;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_002847879.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 5540 7501 . - . ID=gene-HGK48_RS00980;Name=HGK48_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00980 NZ_JAATTN010000008.1 Protein Homology CDS 5540 7501 . - 0 ID=cds-WP_002847880.1;Parent=gene-HGK48_RS00980;Dbxref=GenBank:WP_002847880.1;Name=WP_002847880.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004521,GO:0004534,GO:0008270,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA,5'-3' RNA exonuclease activity|0004534||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847880.1;locus_tag=HGK48_RS00980;product=ribonuclease J;protein_id=WP_002847880.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 7470 8276 . - . ID=gene-HGK48_RS00985;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=HGK48_RS00985 NZ_JAATTN010000008.1 Protein Homology CDS 7470 8276 . - 0 ID=cds-WP_002847881.1;Parent=gene-HGK48_RS00985;Dbxref=GenBank:WP_002847881.1;Name=WP_002847881.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847881.1;locus_tag=HGK48_RS00985;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_002847881.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 8309 9541 . - . ID=gene-HGK48_RS00990;Name=HGK48_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS00990 NZ_JAATTN010000008.1 Protein Homology CDS 8309 9541 . - 0 ID=cds-WP_011732354.1;Parent=gene-HGK48_RS00990;Dbxref=GenBank:WP_011732354.1;Name=WP_011732354.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF017760.6;locus_tag=HGK48_RS00990;product=MFS transporter;protein_id=WP_011732354.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 9662 10420 . + . ID=gene-HGK48_RS00995;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=HGK48_RS00995 NZ_JAATTN010000008.1 Protein Homology CDS 9662 10420 . + 0 ID=cds-WP_002847885.1;Parent=gene-HGK48_RS00995;Dbxref=GenBank:WP_002847885.1;Name=WP_002847885.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847885.1;locus_tag=HGK48_RS00995;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_002847885.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 10417 10956 . + . ID=gene-HGK48_RS01000;Name=HGK48_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01000 NZ_JAATTN010000008.1 Protein Homology CDS 10417 10956 . + 0 ID=cds-WP_002847887.1;Parent=gene-HGK48_RS01000;Dbxref=GenBank:WP_002847887.1;Name=WP_002847887.1;Ontology_term=GO:0009116,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847887.1;locus_tag=HGK48_RS01000;product=phosphorylase family protein;protein_id=WP_002847887.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 10953 12017 . + . ID=gene-HGK48_RS01005;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=HGK48_RS01005 NZ_JAATTN010000008.1 Protein Homology CDS 10953 12017 . + 0 ID=cds-WP_002847889.1;Parent=gene-HGK48_RS01005;Dbxref=GenBank:WP_002847889.1;Name=WP_002847889.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847889.1;locus_tag=HGK48_RS01005;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_002847889.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 12014 12313 . + . ID=gene-HGK48_RS01010;Name=HGK48_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01010 NZ_JAATTN010000008.1 Protein Homology CDS 12014 12313 . + 0 ID=cds-WP_010403547.1;Parent=gene-HGK48_RS01010;Dbxref=GenBank:WP_010403547.1;Name=WP_010403547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010403547.1;locus_tag=HGK48_RS01010;product=transcriptional regulator;protein_id=WP_010403547.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 12464 13423 . - . ID=gene-HGK48_RS01015;Name=HGK48_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01015 NZ_JAATTN010000008.1 Protein Homology CDS 12464 13423 . - 0 ID=cds-WP_002847891.1;Parent=gene-HGK48_RS01015;Dbxref=GenBank:WP_002847891.1;Name=WP_002847891.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002943044.1;locus_tag=HGK48_RS01015;product=pseudouridine synthase family protein;protein_id=WP_002847891.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 13505 14833 . + . ID=gene-HGK48_RS01020;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=HGK48_RS01020 NZ_JAATTN010000008.1 Protein Homology CDS 13505 14833 . + 0 ID=cds-WP_002847892.1;Parent=gene-HGK48_RS01020;Dbxref=GenBank:WP_002847892.1;Name=WP_002847892.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343495.1;locus_tag=HGK48_RS01020;product=adenylosuccinate lyase;protein_id=WP_002847892.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 14910 17285 . + . ID=gene-HGK48_RS01025;Name=HGK48_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01025 NZ_JAATTN010000008.1 Protein Homology CDS 14910 17285 . + 0 ID=cds-WP_002847893.1;Parent=gene-HGK48_RS01025;Dbxref=GenBank:WP_002847893.1;Name=WP_002847893.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002343496.1;locus_tag=HGK48_RS01025;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_002847893.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 17514 18983 . + . ID=gene-HGK48_RS01030;Name=HGK48_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01030 NZ_JAATTN010000008.1 Protein Homology CDS 17514 18983 . + 0 ID=cds-WP_002847896.1;Parent=gene-HGK48_RS01030;Dbxref=GenBank:WP_002847896.1;Name=WP_002847896.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847896.1;locus_tag=HGK48_RS01030;product=amino acid permease;protein_id=WP_002847896.1;transl_table=11 NZ_JAATTN010000008.1 RefSeq gene 19031 19504 . - . ID=gene-HGK48_RS01035;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=HGK48_RS01035 NZ_JAATTN010000008.1 Protein Homology CDS 19031 19504 . - 0 ID=cds-WP_002847898.1;Parent=gene-HGK48_RS01035;Dbxref=GenBank:WP_002847898.1;Name=WP_002847898.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002847898.1;locus_tag=HGK48_RS01035;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_002847898.1;transl_table=11 ##sequence-region NZ_JAATTN010000090.1 1 6145 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000090.1 RefSeq region 1 6145 . + . ID=NZ_JAATTN010000090.1:1..6145;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000090.1 RefSeq gene 1 3561 . + . ID=gene-HGK48_RS05285;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=HGK48_RS05285;partial=true;start_range=.,1 NZ_JAATTN010000090.1 Protein Homology CDS 1 3561 . + 0 ID=cds-WP_168236730.1;Parent=gene-HGK48_RS05285;Dbxref=GenBank:WP_168236730.1;Name=WP_168236730.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850476.1;locus_tag=HGK48_RS05285;partial=true;product=glutamate synthase large subunit;protein_id=WP_168236730.1;start_range=.,1;transl_table=11 NZ_JAATTN010000090.1 RefSeq gene 3563 4921 . + . ID=gene-HGK48_RS05290;Name=HGK48_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05290 NZ_JAATTN010000090.1 Protein Homology CDS 3563 4921 . + 0 ID=cds-WP_002850474.1;Parent=gene-HGK48_RS05290;Dbxref=GenBank:WP_002850474.1;Name=WP_002850474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732228.1;locus_tag=HGK48_RS05290;product=glutamate synthase subunit beta;protein_id=WP_002850474.1;transl_table=11 NZ_JAATTN010000090.1 RefSeq gene 5023 5550 . + . ID=gene-HGK48_RS05295;Name=HGK48_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05295 NZ_JAATTN010000090.1 Protein Homology CDS 5023 5550 . + 0 ID=cds-WP_002850472.1;Parent=gene-HGK48_RS05295;Dbxref=GenBank:WP_002850472.1;Name=WP_002850472.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016646041.1;locus_tag=HGK48_RS05295;product=LOG family protein;protein_id=WP_002850472.1;transl_table=11 NZ_JAATTN010000090.1 RefSeq gene 5607 6119 . + . ID=gene-HGK48_RS05300;Name=HGK48_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05300 NZ_JAATTN010000090.1 GeneMarkS-2+ CDS 5607 6119 . + 0 ID=cds-WP_011732226.1;Parent=gene-HGK48_RS05300;Dbxref=GenBank:WP_011732226.1;Name=WP_011732226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05300;product=hypothetical protein;protein_id=WP_011732226.1;transl_table=11 ##sequence-region NZ_JAATTN010000091.1 1 6136 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000091.1 RefSeq region 1 6136 . + . ID=NZ_JAATTN010000091.1:1..6136;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000091.1 RefSeq gene 31 465 . + . ID=gene-HGK48_RS05305;Name=HGK48_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05305 NZ_JAATTN010000091.1 GeneMarkS-2+ CDS 31 465 . + 0 ID=cds-WP_025370392.1;Parent=gene-HGK48_RS05305;Dbxref=GenBank:WP_025370392.1;Name=WP_025370392.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS05305;product=class I SAM-dependent methyltransferase;protein_id=WP_025370392.1;transl_table=11 NZ_JAATTN010000091.1 RefSeq gene 428 1450 . + . ID=gene-HGK48_RS05310;Name=pseI;gbkey=Gene;gene=pseI;gene_biotype=protein_coding;locus_tag=HGK48_RS05310 NZ_JAATTN010000091.1 Protein Homology CDS 428 1450 . + 0 ID=cds-WP_002850575.1;Parent=gene-HGK48_RS05310;Dbxref=GenBank:WP_002850575.1;Name=WP_002850575.1;Ontology_term=GO:0016765;gbkey=CDS;gene=pseI;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850575.1;locus_tag=HGK48_RS05310;product=pseudaminic acid synthase;protein_id=WP_002850575.1;transl_table=11 NZ_JAATTN010000091.1 RefSeq gene 1505 2869 . - . ID=gene-HGK48_RS05315;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=HGK48_RS05315 NZ_JAATTN010000091.1 Protein Homology CDS 1505 2869 . - 0 ID=cds-WP_029662457.1;Parent=gene-HGK48_RS05315;Dbxref=GenBank:WP_029662457.1;Name=WP_029662457.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850577.1;locus_tag=HGK48_RS05315;product=NADP-specific glutamate dehydrogenase;protein_id=WP_029662457.1;transl_table=11 NZ_JAATTN010000091.1 RefSeq gene 2977 3660 . - . ID=gene-HGK48_RS05320;Name=HGK48_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05320 NZ_JAATTN010000091.1 Protein Homology CDS 2977 3660 . - 0 ID=cds-WP_002850579.1;Parent=gene-HGK48_RS05320;Dbxref=GenBank:WP_002850579.1;Name=WP_002850579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850579.1;locus_tag=HGK48_RS05320;product=MqnA/MqnD/SBP family protein;protein_id=WP_002850579.1;transl_table=11 NZ_JAATTN010000091.1 RefSeq gene 3668 4297 . - . ID=gene-HGK48_RS05325;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=HGK48_RS05325 NZ_JAATTN010000091.1 Protein Homology CDS 3668 4297 . - 0 ID=cds-WP_002850580.1;Parent=gene-HGK48_RS05325;Dbxref=GenBank:WP_002850580.1;Name=WP_002850580.1;Ontology_term=GO:0006223,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=uracil salvage|0006223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850580.1;locus_tag=HGK48_RS05325;product=uracil phosphoribosyltransferase;protein_id=WP_002850580.1;transl_table=11 NZ_JAATTN010000091.1 RefSeq gene 4695 5942 . - . ID=gene-HGK48_RS05330;Name=HGK48_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05330 NZ_JAATTN010000091.1 Protein Homology CDS 4695 5942 . - 0 ID=cds-WP_002850582.1;Parent=gene-HGK48_RS05330;Dbxref=GenBank:WP_002850582.1;Name=WP_002850582.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850582.1;locus_tag=HGK48_RS05330;product=malic enzyme-like NAD(P)-binding protein;protein_id=WP_002850582.1;transl_table=11 ##sequence-region NZ_JAATTN010000092.1 1 6065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000092.1 RefSeq region 1 6065 . + . ID=NZ_JAATTN010000092.1:1..6065;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000092.1 RefSeq gene 223 1704 . + . ID=gene-HGK48_RS05335;Name=HGK48_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05335 NZ_JAATTN010000092.1 Protein Homology CDS 223 1704 . + 0 ID=cds-WP_046037358.1;Parent=gene-HGK48_RS05335;Dbxref=GenBank:WP_046037358.1;Name=WP_046037358.1;Ontology_term=GO:0006817,GO:0005315,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886000.1;locus_tag=HGK48_RS05335;product=inorganic phosphate transporter;protein_id=WP_046037358.1;transl_table=11 NZ_JAATTN010000092.1 RefSeq gene 1776 4619 . + . ID=gene-HGK48_RS05340;Name=HGK48_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05340 NZ_JAATTN010000092.1 Protein Homology CDS 1776 4619 . + 0 ID=cds-WP_002849083.1;Parent=gene-HGK48_RS05340;Dbxref=GenBank:WP_002849083.1;Name=WP_002849083.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: protein motif:HMM:NF012874.6;locus_tag=HGK48_RS05340;product=flagellin N-terminal helical domain-containing protein;protein_id=WP_002849083.1;transl_table=11 NZ_JAATTN010000092.1 RefSeq gene 4681 6065 . + . ID=gene-HGK48_RS05345;Name=HGK48_RS05345;end_range=6065,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05345;partial=true NZ_JAATTN010000092.1 Protein Homology CDS 4681 6065 . + 0 ID=cds-WP_168236731.1;Parent=gene-HGK48_RS05345;Dbxref=GenBank:WP_168236731.1;Name=WP_168236731.1;end_range=6065,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731914.1;locus_tag=HGK48_RS05345;partial=true;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=WP_168236731.1;transl_table=11 ##sequence-region NZ_JAATTN010000093.1 1 6057 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000093.1 RefSeq region 1 6057 . + . ID=NZ_JAATTN010000093.1:1..6057;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000093.1 RefSeq gene 25 225 . - . ID=gene-HGK48_RS05350;Name=kcuS;gbkey=Gene;gene=kcuS;gene_biotype=protein_coding;locus_tag=HGK48_RS05350 NZ_JAATTN010000093.1 Protein Homology CDS 25 225 . - 0 ID=cds-WP_011731686.1;Parent=gene-HGK48_RS05350;Dbxref=GenBank:WP_011731686.1;Name=WP_011731686.1;gbkey=CDS;gene=kcuS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_148936497.1;locus_tag=HGK48_RS05350;product=KCU-star family selenoprotein;protein_id=WP_011731686.1;transl_table=11 NZ_JAATTN010000093.1 RefSeq gene 209 2290 . - . ID=gene-HGK48_RS05355;Name=HGK48_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05355 NZ_JAATTN010000093.1 Protein Homology CDS 209 2290 . - 0 ID=cds-WP_024305266.1;Parent=gene-HGK48_RS05355;Dbxref=GenBank:WP_024305266.1;Name=WP_024305266.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848050.1;locus_tag=HGK48_RS05355;product=carbon starvation CstA family protein;protein_id=WP_024305266.1;transl_table=11 NZ_JAATTN010000093.1 RefSeq gene 2480 2680 . + . ID=gene-HGK48_RS05360;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=HGK48_RS05360 NZ_JAATTN010000093.1 Protein Homology CDS 2480 2680 . + 0 ID=cds-WP_002848051.1;Parent=gene-HGK48_RS05360;Dbxref=GenBank:WP_002848051.1;Name=WP_002848051.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: protein motif:HMM:TIGR01683.1;locus_tag=HGK48_RS05360;product=sulfur carrier protein ThiS;protein_id=WP_002848051.1;transl_table=11 NZ_JAATTN010000093.1 RefSeq gene 2817 3620 . + . ID=gene-HGK48_RS05365;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=HGK48_RS05365 NZ_JAATTN010000093.1 Protein Homology CDS 2817 3620 . + 0 ID=cds-WP_024305267.1;Parent=gene-HGK48_RS05365;Dbxref=GenBank:WP_024305267.1;Name=WP_024305267.1;gbkey=CDS;gene=thiF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848052.1;locus_tag=HGK48_RS05365;product=sulfur carrier protein ThiS adenylyltransferase ThiF;protein_id=WP_024305267.1;transl_table=11 NZ_JAATTN010000093.1 RefSeq gene 3613 4374 . + . ID=gene-HGK48_RS05370;Name=HGK48_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05370 NZ_JAATTN010000093.1 Protein Homology CDS 3613 4374 . + 0 ID=cds-WP_002848055.1;Parent=gene-HGK48_RS05370;Dbxref=GenBank:WP_002848055.1;Name=WP_002848055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848055.1;locus_tag=HGK48_RS05370;product=thiazole synthase;protein_id=WP_002848055.1;transl_table=11 NZ_JAATTN010000093.1 RefSeq gene 4396 5556 . + . ID=gene-HGK48_RS05375;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=HGK48_RS05375 NZ_JAATTN010000093.1 Protein Homology CDS 4396 5556 . + 0 ID=cds-WP_002848057.1;Parent=gene-HGK48_RS05375;Dbxref=GenBank:WP_002848057.1;Name=WP_002848057.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848057.1;locus_tag=HGK48_RS05375;product=2-iminoacetate synthase ThiH;protein_id=WP_002848057.1;transl_table=11 NZ_JAATTN010000093.1 RefSeq gene 5606 6057 . - . ID=gene-HGK48_RS05380;Name=HGK48_RS05380;end_range=6057,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05380;partial=true NZ_JAATTN010000093.1 Protein Homology CDS 5606 6057 . - 2 ID=cds-WP_168236732.1;Parent=gene-HGK48_RS05380;Dbxref=GenBank:WP_168236732.1;Name=WP_168236732.1;end_range=6057,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848059.1;locus_tag=HGK48_RS05380;partial=true;product=YigZ family protein;protein_id=WP_168236732.1;transl_table=11 ##sequence-region NZ_JAATTN010000094.1 1 6042 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000094.1 RefSeq region 1 6042 . + . ID=NZ_JAATTN010000094.1:1..6042;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000094.1 RefSeq pseudogene 1 266 . - . ID=gene-HGK48_RS05385;Name=HGK48_RS05385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS05385;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000094.1 Protein Homology CDS 1 266 . - 0 ID=cds-HGK48_RS05385;Parent=gene-HGK48_RS05385;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848960.1;locus_tag=HGK48_RS05385;partial=true;product=cell division protein FtsA;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000094.1 RefSeq gene 272 1729 . - . ID=gene-HGK48_RS05390;Name=HGK48_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05390 NZ_JAATTN010000094.1 Protein Homology CDS 272 1729 . - 0 ID=cds-WP_002848957.1;Parent=gene-HGK48_RS05390;Dbxref=GenBank:WP_002848957.1;Name=WP_002848957.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848957.1;locus_tag=HGK48_RS05390;product=peptidylprolyl isomerase;protein_id=WP_002848957.1;transl_table=11 NZ_JAATTN010000094.1 RefSeq gene 1850 2443 . - . ID=gene-HGK48_RS05395;Name=HGK48_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05395 NZ_JAATTN010000094.1 Protein Homology CDS 1850 2443 . - 0 ID=cds-WP_002848955.1;Parent=gene-HGK48_RS05395;Dbxref=GenBank:WP_002848955.1;Name=WP_002848955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848955.1;locus_tag=HGK48_RS05395;product=class II aldolase and adducin N-terminal domain-containing protein;protein_id=WP_002848955.1;transl_table=11 NZ_JAATTN010000094.1 RefSeq gene 2552 3475 . + . ID=gene-HGK48_RS05400;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=HGK48_RS05400 NZ_JAATTN010000094.1 Protein Homology CDS 2552 3475 . + 0 ID=cds-WP_002848952.1;Parent=gene-HGK48_RS05400;Dbxref=GenBank:WP_002848952.1;Name=WP_002848952.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848952.1;locus_tag=HGK48_RS05400;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_002848952.1;transl_table=11 NZ_JAATTN010000094.1 RefSeq gene 3472 3753 . + . ID=gene-HGK48_RS05405;Name=HGK48_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05405 NZ_JAATTN010000094.1 Protein Homology CDS 3472 3753 . + 0 ID=cds-WP_002848947.1;Parent=gene-HGK48_RS05405;Dbxref=GenBank:WP_002848947.1;Name=WP_002848947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848947.1;locus_tag=HGK48_RS05405;product=hypothetical protein;protein_id=WP_002848947.1;transl_table=11 NZ_JAATTN010000094.1 RefSeq gene 3753 5714 . + . ID=gene-HGK48_RS05410;Name=HGK48_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05410 NZ_JAATTN010000094.1 Protein Homology CDS 3753 5714 . + 0 ID=cds-WP_002848945.1;Parent=gene-HGK48_RS05410;Dbxref=GenBank:WP_002848945.1;Name=WP_002848945.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024905.6;locus_tag=HGK48_RS05410;product=FUSC family protein;protein_id=WP_002848945.1;transl_table=11 NZ_JAATTN010000094.1 RefSeq gene 5700 6042 . - . ID=gene-HGK48_RS05415;Name=HGK48_RS05415;end_range=6042,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05415;partial=true NZ_JAATTN010000094.1 Protein Homology CDS 5700 6042 . - 1 ID=cds-WP_168236733.1;Parent=gene-HGK48_RS05415;Dbxref=GenBank:WP_168236733.1;Name=WP_168236733.1;end_range=6042,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731872.1;locus_tag=HGK48_RS05415;partial=true;product=hypothetical protein;protein_id=WP_168236733.1;transl_table=11 ##sequence-region NZ_JAATTN010000095.1 1 6041 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000095.1 RefSeq region 1 6041 . + . ID=NZ_JAATTN010000095.1:1..6041;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000095.1 RefSeq gene 1 119 . - . ID=gene-HGK48_RS05420;Name=HGK48_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05420;partial=true;start_range=.,1 NZ_JAATTN010000095.1 Protein Homology CDS 1 119 . - 0 ID=cds-WP_168236734.1;Parent=gene-HGK48_RS05420;Dbxref=GenBank:WP_168236734.1;Name=WP_168236734.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950794.1;locus_tag=HGK48_RS05420;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_168236734.1;start_range=.,1;transl_table=11 NZ_JAATTN010000095.1 RefSeq gene 182 1054 . + . ID=gene-HGK48_RS05425;Name=HGK48_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05425 NZ_JAATTN010000095.1 Protein Homology CDS 182 1054 . + 0 ID=cds-WP_024305246.1;Parent=gene-HGK48_RS05425;Dbxref=GenBank:WP_024305246.1;Name=WP_024305246.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849134.1;locus_tag=HGK48_RS05425;product=LysR family transcriptional regulator;protein_id=WP_024305246.1;transl_table=11 NZ_JAATTN010000095.1 RefSeq gene 1044 1487 . - . ID=gene-HGK48_RS05430;Name=HGK48_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05430 NZ_JAATTN010000095.1 Protein Homology CDS 1044 1487 . - 0 ID=cds-WP_002849139.1;Parent=gene-HGK48_RS05430;Dbxref=GenBank:WP_002849139.1;Name=WP_002849139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002863388.1;locus_tag=HGK48_RS05430;product=hypothetical protein;protein_id=WP_002849139.1;transl_table=11 NZ_JAATTN010000095.1 RefSeq gene 1497 3209 . - . ID=gene-HGK48_RS05435;Name=HGK48_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05435 NZ_JAATTN010000095.1 Protein Homology CDS 1497 3209 . - 0 ID=cds-WP_024305247.1;Parent=gene-HGK48_RS05435;Dbxref=GenBank:WP_024305247.1;Name=WP_024305247.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810209.1;locus_tag=HGK48_RS05435;product=M3 family oligoendopeptidase;protein_id=WP_024305247.1;transl_table=11 NZ_JAATTN010000095.1 RefSeq gene 3296 4525 . - . ID=gene-HGK48_RS05440;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=HGK48_RS05440 NZ_JAATTN010000095.1 Protein Homology CDS 3296 4525 . - 0 ID=cds-WP_002849141.1;Parent=gene-HGK48_RS05440;Dbxref=GenBank:WP_002849141.1;Name=WP_002849141.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849141.1;locus_tag=HGK48_RS05440;product=serine/threonine transporter SstT;protein_id=WP_002849141.1;transl_table=11 NZ_JAATTN010000095.1 RefSeq gene 4685 5881 . + . ID=gene-HGK48_RS05445;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=HGK48_RS05445 NZ_JAATTN010000095.1 Protein Homology CDS 4685 5881 . + 0 ID=cds-WP_011731926.1;Parent=gene-HGK48_RS05445;Dbxref=GenBank:WP_011731926.1;Name=WP_011731926.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849143.1;locus_tag=HGK48_RS05445;product=methionine adenosyltransferase;protein_id=WP_011731926.1;transl_table=11 ##sequence-region NZ_JAATTN010000096.1 1 5910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000096.1 RefSeq region 1 5910 . + . ID=NZ_JAATTN010000096.1:1..5910;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000096.1 RefSeq pseudogene 1 130 . + . ID=gene-HGK48_RS11210;Name=HGK48_RS11210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11210;partial=true;pseudo=true;start_range=.,1 NZ_JAATTN010000096.1 Protein Homology CDS 1 130 . + 1 ID=cds-HGK48_RS11210;Parent=gene-HGK48_RS11210;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732045.1;locus_tag=HGK48_RS11210;partial=true;product=3-isopropylmalate dehydratase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAATTN010000096.1 RefSeq gene 155 1225 . + . ID=gene-HGK48_RS05455;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=HGK48_RS05455 NZ_JAATTN010000096.1 Protein Homology CDS 155 1225 . + 0 ID=cds-WP_002849578.1;Parent=gene-HGK48_RS05455;Dbxref=GenBank:WP_002849578.1;Name=WP_002849578.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849578.1;locus_tag=HGK48_RS05455;product=3-isopropylmalate dehydrogenase;protein_id=WP_002849578.1;transl_table=11 NZ_JAATTN010000096.1 RefSeq gene 1222 1473 . + . ID=gene-HGK48_RS05460;Name=HGK48_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05460 NZ_JAATTN010000096.1 Protein Homology CDS 1222 1473 . + 0 ID=cds-WP_002849577.1;Parent=gene-HGK48_RS05460;Dbxref=GenBank:WP_002849577.1;Name=WP_002849577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002856910.1;locus_tag=HGK48_RS05460;product=hypothetical protein;protein_id=WP_002849577.1;transl_table=11 NZ_JAATTN010000096.1 RefSeq pseudogene 1653 1817 . + . ID=gene-HGK48_RS11525;Name=HGK48_RS11525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HGK48_RS11525;partial=true;pseudo=true;start_range=.,1653 NZ_JAATTN010000096.1 Protein Homology CDS 1653 1817 . + 0 ID=cds-HGK48_RS11525;Parent=gene-HGK48_RS11525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002867966.1;locus_tag=HGK48_RS11525;partial=true;product=CiaD-like domain-containing protein;pseudo=true;start_range=.,1653;transl_table=11 NZ_JAATTN010000096.1 RefSeq gene 1777 2883 . + . ID=gene-HGK48_RS05470;Name=HGK48_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05470 NZ_JAATTN010000096.1 Protein Homology CDS 1777 2883 . + 0 ID=cds-WP_002849575.1;Parent=gene-HGK48_RS05470;Dbxref=GenBank:WP_002849575.1;Name=WP_002849575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002945417.1;locus_tag=HGK48_RS05470;product=tRNA nucleotidyltransferase/poly(A) polymerase family protein;protein_id=WP_002849575.1;transl_table=11 NZ_JAATTN010000096.1 RefSeq gene 2880 3758 . + . ID=gene-HGK48_RS05475;Name=HGK48_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05475 NZ_JAATTN010000096.1 Protein Homology CDS 2880 3758 . + 0 ID=cds-WP_002849573.1;Parent=gene-HGK48_RS05475;Dbxref=GenBank:WP_002849573.1;Name=WP_002849573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014587.6;locus_tag=HGK48_RS05475;product=Ppx/GppA phosphatase family protein;protein_id=WP_002849573.1;transl_table=11 NZ_JAATTN010000096.1 RefSeq gene 3761 4207 . + . ID=gene-HGK48_RS05480;Name=HGK48_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05480 NZ_JAATTN010000096.1 Protein Homology CDS 3761 4207 . + 0 ID=cds-WP_002849571.1;Parent=gene-HGK48_RS05480;Dbxref=GenBank:WP_002849571.1;Name=WP_002849571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849571.1;locus_tag=HGK48_RS05480;product=GatB/YqeY domain-containing protein;protein_id=WP_002849571.1;transl_table=11 NZ_JAATTN010000096.1 RefSeq gene 4295 5491 . - . ID=gene-HGK48_RS05485;Name=HGK48_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05485 NZ_JAATTN010000096.1 Protein Homology CDS 4295 5491 . - 0 ID=cds-WP_002849569.1;Parent=gene-HGK48_RS05485;Dbxref=GenBank:WP_002849569.1;Name=WP_002849569.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: protein motif:HMM:NF012245.6;locus_tag=HGK48_RS05485;product=methyl-accepting chemotaxis protein;protein_id=WP_002849569.1;transl_table=11 NZ_JAATTN010000096.1 RefSeq gene 5494 5910 . - . ID=gene-HGK48_RS05490;Name=HGK48_RS05490;end_range=5910,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05490;partial=true NZ_JAATTN010000096.1 Protein Homology CDS 5494 5910 . - 0 ID=cds-WP_168236735.1;Parent=gene-HGK48_RS05490;Dbxref=GenBank:WP_168236735.1;Name=WP_168236735.1;Ontology_term=GO:0005515;end_range=5910,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002849568.1;locus_tag=HGK48_RS05490;partial=true;product=PAS domain-containing protein;protein_id=WP_168236735.1;transl_table=11 ##sequence-region NZ_JAATTN010000097.1 1 5975 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000097.1 RefSeq region 1 5975 . + . ID=NZ_JAATTN010000097.1:1..5975;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000097.1 RefSeq gene 1 1035 . + . ID=gene-HGK48_RS05495;Name=mqnF;gbkey=Gene;gene=mqnF;gene_biotype=protein_coding;locus_tag=HGK48_RS05495;partial=true;start_range=.,1 NZ_JAATTN010000097.1 Protein Homology CDS 1 1035 . + 0 ID=cds-WP_168236736.1;Parent=gene-HGK48_RS05495;Dbxref=GenBank:WP_168236736.1;Name=WP_168236736.1;gbkey=CDS;gene=mqnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850503.1;locus_tag=HGK48_RS05495;partial=true;product=aminofutalosine deaminase family hydrolase;protein_id=WP_168236736.1;start_range=.,1;transl_table=11 NZ_JAATTN010000097.1 RefSeq gene 1023 1886 . + . ID=gene-HGK48_RS05500;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=HGK48_RS05500 NZ_JAATTN010000097.1 Protein Homology CDS 1023 1886 . + 0 ID=cds-WP_002850501.1;Parent=gene-HGK48_RS05500;Dbxref=GenBank:WP_002850501.1;Name=WP_002850501.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850501.1;locus_tag=HGK48_RS05500;product=signal peptide peptidase SppA;protein_id=WP_002850501.1;transl_table=11 NZ_JAATTN010000097.1 RefSeq gene 1887 2552 . + . ID=gene-HGK48_RS05505;Name=HGK48_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05505 NZ_JAATTN010000097.1 Protein Homology CDS 1887 2552 . + 0 ID=cds-WP_002850500.1;Parent=gene-HGK48_RS05505;Dbxref=GenBank:WP_002850500.1;Name=WP_002850500.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004308309.1;locus_tag=HGK48_RS05505;product=MOSC domain-containing protein;protein_id=WP_002850500.1;transl_table=11 NZ_JAATTN010000097.1 RefSeq gene 2580 4853 . - . ID=gene-HGK48_RS05510;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=HGK48_RS05510 NZ_JAATTN010000097.1 Protein Homology CDS 2580 4853 . - 0 ID=cds-WP_011732232.1;Parent=gene-HGK48_RS05510;Dbxref=GenBank:WP_011732232.1;Name=WP_011732232.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732232.1;locus_tag=HGK48_RS05510;product=outer membrane protein assembly factor BamA;protein_id=WP_011732232.1;transl_table=11 NZ_JAATTN010000097.1 RefSeq gene 5026 5856 . + . ID=gene-HGK48_RS05515;Name=HGK48_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05515 NZ_JAATTN010000097.1 Protein Homology CDS 5026 5856 . + 0 ID=cds-WP_002850498.1;Parent=gene-HGK48_RS05515;Dbxref=GenBank:WP_002850498.1;Name=WP_002850498.1;Ontology_term=GO:0006571,GO:0004665,GO:0008977;gbkey=CDS;go_function=prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=L-tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002857321.1;locus_tag=HGK48_RS05515;product=prephenate dehydrogenase;protein_id=WP_002850498.1;transl_table=11 ##sequence-region NZ_JAATTN010000098.1 1 5893 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000098.1 RefSeq region 1 5893 . + . ID=NZ_JAATTN010000098.1:1..5893;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000098.1 RefSeq gene 111 302 . - . ID=gene-HGK48_RS05520;Name=HGK48_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05520 NZ_JAATTN010000098.1 Protein Homology CDS 111 302 . - 0 ID=cds-WP_158004711.1;Parent=gene-HGK48_RS05520;Dbxref=GenBank:WP_158004711.1;Name=WP_158004711.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=HGK48_RS05520;product=helix-turn-helix domain-containing protein;protein_id=WP_158004711.1;transl_table=11 NZ_JAATTN010000098.1 RefSeq gene 427 552 . - . ID=gene-HGK48_RS11375;Name=HGK48_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11375 NZ_JAATTN010000098.1 GeneMarkS-2+ CDS 427 552 . - 0 ID=cds-WP_011732149.1;Parent=gene-HGK48_RS11375;Dbxref=GenBank:WP_011732149.1;Name=WP_011732149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11375;product=hypothetical protein;protein_id=WP_011732149.1;transl_table=11 NZ_JAATTN010000098.1 RefSeq gene 617 1762 . - . ID=gene-HGK48_RS05525;Name=HGK48_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05525 NZ_JAATTN010000098.1 Protein Homology CDS 617 1762 . - 0 ID=cds-WP_002850082.1;Parent=gene-HGK48_RS05525;Dbxref=GenBank:WP_002850082.1;Name=WP_002850082.1;Ontology_term=GO:0018455,GO:0030554,GO:0046872;gbkey=CDS;go_function=alcohol dehydrogenase [NAD(P)+] activity|0018455||IEA,adenyl nucleotide binding|0030554||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850082.1;locus_tag=HGK48_RS05525;product=iron-containing alcohol dehydrogenase;protein_id=WP_002850082.1;transl_table=11 NZ_JAATTN010000098.1 RefSeq gene 1855 2748 . - . ID=gene-HGK48_RS05530;Name=HGK48_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05530 NZ_JAATTN010000098.1 Protein Homology CDS 1855 2748 . - 0 ID=cds-WP_011732147.1;Parent=gene-HGK48_RS05530;Dbxref=GenBank:WP_011732147.1;Name=WP_011732147.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732147.1;locus_tag=HGK48_RS05530;product=AraC family transcriptional regulator;protein_id=WP_011732147.1;transl_table=11 NZ_JAATTN010000098.1 RefSeq gene 2889 3188 . + . ID=gene-HGK48_RS05535;Name=HGK48_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05535 NZ_JAATTN010000098.1 Protein Homology CDS 2889 3188 . + 0 ID=cds-WP_002850081.1;Parent=gene-HGK48_RS05535;Dbxref=GenBank:WP_002850081.1;Name=WP_002850081.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002850081.1;locus_tag=HGK48_RS05535;product=TFIIB-type zinc ribbon-containing protein;protein_id=WP_002850081.1;transl_table=11 NZ_JAATTN010000098.1 RefSeq gene 3219 3545 . - . ID=gene-HGK48_RS05540;Name=HGK48_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05540 NZ_JAATTN010000098.1 Protein Homology CDS 3219 3545 . - 0 ID=cds-WP_024305165.1;Parent=gene-HGK48_RS05540;Dbxref=GenBank:WP_024305165.1;Name=WP_024305165.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014721.6;locus_tag=HGK48_RS05540;product=YnfA family protein;protein_id=WP_024305165.1;transl_table=11 NZ_JAATTN010000098.1 RefSeq gene 3560 3645 . - . ID=gene-HGK48_RS05545;Name=HGK48_RS05545;gbkey=Gene;gene_biotype=tRNA;locus_tag=HGK48_RS05545 NZ_JAATTN010000098.1 tRNAscan-SE tRNA 3560 3645 . - . ID=rna-HGK48_RS05545;Parent=gene-HGK48_RS05545;anticodon=(pos:complement(3609..3611));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS05545;product=tRNA-Leu NZ_JAATTN010000098.1 tRNAscan-SE exon 3560 3645 . - . ID=exon-HGK48_RS05545-1;Parent=rna-HGK48_RS05545;anticodon=(pos:complement(3609..3611));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=HGK48_RS05545;product=tRNA-Leu NZ_JAATTN010000098.1 RefSeq gene 3677 3979 . - . ID=gene-HGK48_RS05550;Name=HGK48_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05550 NZ_JAATTN010000098.1 Protein Homology CDS 3677 3979 . - 0 ID=cds-WP_002850080.1;Parent=gene-HGK48_RS05550;Dbxref=GenBank:WP_002850080.1;Name=WP_002850080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011372064.1;locus_tag=HGK48_RS05550;product=F0F1 ATP synthase subunit C;protein_id=WP_002850080.1;transl_table=11 NZ_JAATTN010000098.1 RefSeq gene 4090 5893 . - . ID=gene-HGK48_RS05555;Name=ciaB;end_range=5893,.;gbkey=Gene;gene=ciaB;gene_biotype=protein_coding;locus_tag=HGK48_RS05555;partial=true NZ_JAATTN010000098.1 Protein Homology CDS 4090 5893 . - 1 ID=cds-WP_168236737.1;Parent=gene-HGK48_RS05555;Dbxref=GenBank:WP_168236737.1;Name=WP_168236737.1;end_range=5893,.;gbkey=CDS;gene=ciaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011732146.1;locus_tag=HGK48_RS05555;partial=true;product=invasion protein CiaB;protein_id=WP_168236737.1;transl_table=11 ##sequence-region NZ_JAATTN010000099.1 1 5755 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000099.1 RefSeq region 1 5755 . + . ID=NZ_JAATTN010000099.1:1..5755;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000099.1 RefSeq gene 1 866 . - . ID=gene-HGK48_RS05560;Name=HGK48_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05560;partial=true;start_range=.,1 NZ_JAATTN010000099.1 Protein Homology CDS 1 866 . - 0 ID=cds-WP_168236738.1;Parent=gene-HGK48_RS05560;Dbxref=GenBank:WP_168236738.1;Name=WP_168236738.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731752.1;locus_tag=HGK48_RS05560;partial=true;product=SLC13 family permease;protein_id=WP_168236738.1;start_range=.,1;transl_table=11 NZ_JAATTN010000099.1 RefSeq gene 1203 2186 . + . ID=gene-HGK48_RS05565;Name=HGK48_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05565 NZ_JAATTN010000099.1 Protein Homology CDS 1203 2186 . + 0 ID=cds-WP_024305306.1;Parent=gene-HGK48_RS05565;Dbxref=GenBank:WP_024305306.1;Name=WP_024305306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731753.1;locus_tag=HGK48_RS05565;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_024305306.1;transl_table=11 NZ_JAATTN010000099.1 RefSeq gene 2170 3825 . + . ID=gene-HGK48_RS05570;Name=HGK48_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05570 NZ_JAATTN010000099.1 Protein Homology CDS 2170 3825 . + 0 ID=cds-WP_002848327.1;Parent=gene-HGK48_RS05570;Dbxref=GenBank:WP_002848327.1;Name=WP_002848327.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848327.1;locus_tag=HGK48_RS05570;product=ATP-binding cassette domain-containing protein;protein_id=WP_002848327.1;transl_table=11 NZ_JAATTN010000099.1 RefSeq gene 3815 4888 . + . ID=gene-HGK48_RS05575;Name=HGK48_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05575 NZ_JAATTN010000099.1 Protein Homology CDS 3815 4888 . + 0 ID=cds-WP_168236739.1;Parent=gene-HGK48_RS05575;Dbxref=GenBank:WP_168236739.1;Name=WP_168236739.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002848338.1;locus_tag=HGK48_RS05575;product=ABC transporter permease;protein_id=WP_168236739.1;transl_table=11 NZ_JAATTN010000099.1 RefSeq gene 4885 5755 . + . ID=gene-HGK48_RS05580;Name=HGK48_RS05580;end_range=5755,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS05580;partial=true NZ_JAATTN010000099.1 Protein Homology CDS 4885 5755 . + 0 ID=cds-WP_168236740.1;Parent=gene-HGK48_RS05580;Dbxref=GenBank:WP_168236740.1;Name=WP_168236740.1;Ontology_term=GO:0140359,GO:0016020;end_range=5755,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011731755.1;locus_tag=HGK48_RS05580;partial=true;product=ABC transporter permease;protein_id=WP_168236740.1;transl_table=11 ##sequence-region NZ_JAATTN010000009.1 1 17111 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=32020 NZ_JAATTN010000009.1 RefSeq region 1 17111 . + . ID=NZ_JAATTN010000009.1:1..17111;Dbxref=taxon:32020;collected-by=North-West University;collection-date=2019-09-13;country=South Africa: Molopo%2C Vryburg;gbkey=Src;genome=genomic;lat-lon=26.00 S 25.32 E;mol_type=genomic DNA;nat-host=cattle;strain=NW_ME2;sub-species=venerealis NZ_JAATTN010000009.1 RefSeq gene 1 671 . - . ID=gene-HGK48_RS01040;Name=HGK48_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01040;partial=true;start_range=.,1 NZ_JAATTN010000009.1 Protein Homology CDS 1 671 . - 0 ID=cds-WP_168236631.1;Parent=gene-HGK48_RS01040;Dbxref=GenBank:WP_168236631.1;Name=WP_168236631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814348.1;locus_tag=HGK48_RS01040;partial=true;product=nucleotide-binding protein;protein_id=WP_168236631.1;start_range=.,1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 668 2503 . - . ID=gene-HGK48_RS01045;Name=HGK48_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01045 NZ_JAATTN010000009.1 Protein Homology CDS 668 2503 . - 0 ID=cds-WP_168236632.1;Parent=gene-HGK48_RS01045;Dbxref=GenBank:WP_168236632.1;Name=WP_168236632.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016647517.1;locus_tag=HGK48_RS01045;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_168236632.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 2516 4702 . - . ID=gene-HGK48_RS01050;Name=HGK48_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01050 NZ_JAATTN010000009.1 Protein Homology CDS 2516 4702 . - 0 ID=cds-WP_065844119.1;Parent=gene-HGK48_RS01050;Dbxref=GenBank:WP_065844119.1;Name=WP_065844119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002846006.1;locus_tag=HGK48_RS01050;product=zincin-like metallopeptidase domain-containing protein;protein_id=WP_065844119.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 4692 4844 . - . ID=gene-HGK48_RS01055;Name=HGK48_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01055 NZ_JAATTN010000009.1 Protein Homology CDS 4692 4844 . - 0 ID=cds-WP_162832119.1;Parent=gene-HGK48_RS01055;Dbxref=GenBank:WP_162832119.1;Name=WP_162832119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844662.1;locus_tag=HGK48_RS01055;product=hypothetical protein;protein_id=WP_162832119.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 4837 5196 . - . ID=gene-HGK48_RS01060;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=HGK48_RS01060 NZ_JAATTN010000009.1 Protein Homology CDS 4837 5196 . - 0 ID=cds-WP_065840808.1;Parent=gene-HGK48_RS01060;Dbxref=GenBank:WP_065840808.1;Name=WP_065840808.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844661.1;locus_tag=HGK48_RS01060;product=single-stranded DNA-binding protein;protein_id=WP_065840808.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 5193 5300 . - . ID=gene-HGK48_RS01065;Name=HGK48_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01065 NZ_JAATTN010000009.1 GeneMarkS-2+ CDS 5193 5300 . - 0 ID=cds-WP_141071689.1;Parent=gene-HGK48_RS01065;Dbxref=GenBank:WP_141071689.1;Name=WP_141071689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01065;product=single-stranded DNA-binding protein;protein_id=WP_141071689.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 5297 6088 . - . ID=gene-HGK48_RS01070;Name=HGK48_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01070 NZ_JAATTN010000009.1 Protein Homology CDS 5297 6088 . - 0 ID=cds-WP_081305156.1;Parent=gene-HGK48_RS01070;Dbxref=GenBank:WP_081305156.1;Name=WP_081305156.1;Ontology_term=GO:0043684;gbkey=CDS;go_component=type IV secretion system complex|0043684||IEA;inference=COORDINATES: protein motif:HMM:NF013618.6;locus_tag=HGK48_RS01070;product=lytic transglycosylase domain-containing protein;protein_id=WP_081305156.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 6085 7161 . - . ID=gene-HGK48_RS01075;Name=HGK48_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01075 NZ_JAATTN010000009.1 Protein Homology CDS 6085 7161 . - 0 ID=cds-WP_168236633.1;Parent=gene-HGK48_RS01075;Dbxref=GenBank:WP_168236633.1;Name=WP_168236633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019109040.1;locus_tag=HGK48_RS01075;product=TrbI/VirB10 family protein;protein_id=WP_168236633.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 7121 7303 . - . ID=gene-HGK48_RS11125;Name=HGK48_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS11125 NZ_JAATTN010000009.1 GeneMarkS-2+ CDS 7121 7303 . - 0 ID=cds-WP_168236634.1;Parent=gene-HGK48_RS11125;Dbxref=GenBank:WP_168236634.1;Name=WP_168236634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS11125;product=hypothetical protein;protein_id=WP_168236634.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 7313 7747 . - . ID=gene-HGK48_RS01085;Name=HGK48_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01085 NZ_JAATTN010000009.1 GeneMarkS-2+ CDS 7313 7747 . - 0 ID=cds-WP_065840806.1;Parent=gene-HGK48_RS01085;Dbxref=GenBank:WP_065840806.1;Name=WP_065840806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01085;product=hypothetical protein;protein_id=WP_065840806.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 7748 8665 . - . ID=gene-HGK48_RS01090;Name=trbG;gbkey=Gene;gene=trbG;gene_biotype=protein_coding;locus_tag=HGK48_RS01090 NZ_JAATTN010000009.1 Protein Homology CDS 7748 8665 . - 0 ID=cds-WP_065840805.1;Parent=gene-HGK48_RS01090;Dbxref=GenBank:WP_065840805.1;Name=WP_065840805.1;Ontology_term=GO:0009291;gbkey=CDS;gene=trbG;go_process=unidirectional conjugation|0009291||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002844655.1;locus_tag=HGK48_RS01090;product=P-type conjugative transfer protein TrbG;protein_id=WP_065840805.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 8678 9361 . - . ID=gene-HGK48_RS01095;Name=HGK48_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01095 NZ_JAATTN010000009.1 Protein Homology CDS 8678 9361 . - 0 ID=cds-WP_059427753.1;Parent=gene-HGK48_RS01095;Dbxref=GenBank:WP_059427753.1;Name=WP_059427753.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002907783.1;locus_tag=HGK48_RS01095;product=VirB8/TrbF family protein;protein_id=WP_059427753.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 10051 11268 . - . ID=gene-HGK48_RS01100;Name=HGK48_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01100 NZ_JAATTN010000009.1 Protein Homology CDS 10051 11268 . - 0 ID=cds-WP_051119551.1;Parent=gene-HGK48_RS01100;Dbxref=GenBank:WP_051119551.1;Name=WP_051119551.1;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019109041.1;locus_tag=HGK48_RS01100;product=type IV secretion system protein;protein_id=WP_051119551.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 11222 11449 . - . ID=gene-HGK48_RS01105;Name=HGK48_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01105 NZ_JAATTN010000009.1 Protein Homology CDS 11222 11449 . - 0 ID=cds-WP_080648004.1;Parent=gene-HGK48_RS01105;Dbxref=GenBank:WP_080648004.1;Name=WP_080648004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002842753.1;locus_tag=HGK48_RS01105;product=EexN family lipoprotein;protein_id=WP_080648004.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 11505 12446 . - . ID=gene-HGK48_RS01110;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=HGK48_RS01110 NZ_JAATTN010000009.1 Protein Homology CDS 11505 12446 . - 0 ID=cds-WP_024305333.1;Parent=gene-HGK48_RS01110;Dbxref=GenBank:WP_024305333.1;Name=WP_024305333.1;Ontology_term=GO:0009291;gbkey=CDS;gene=trbJ;go_process=unidirectional conjugation|0009291||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002845018.1;locus_tag=HGK48_RS01110;product=P-type conjugative transfer protein TrbJ;protein_id=WP_024305333.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 12448 13188 . - . ID=gene-HGK48_RS01115;Name=HGK48_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01115 NZ_JAATTN010000009.1 Protein Homology CDS 12448 13188 . - 0 ID=cds-WP_168236635.1;Parent=gene-HGK48_RS01115;Dbxref=GenBank:WP_168236635.1;Name=WP_168236635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002779815.1;locus_tag=HGK48_RS01115;product=TrbM/KikA/MpfK family conjugal transfer protein;protein_id=WP_168236635.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 13185 13619 . - . ID=gene-HGK48_RS01120;Name=HGK48_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01120 NZ_JAATTN010000009.1 Protein Homology CDS 13185 13619 . - 0 ID=cds-WP_059431068.1;Parent=gene-HGK48_RS01120;Dbxref=GenBank:WP_059431068.1;Name=WP_059431068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662271.1;locus_tag=HGK48_RS01120;product=cag pathogenicity island Cag12 family protein;protein_id=WP_059431068.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 13620 15410 . - . ID=gene-HGK48_RS01125;Name=HGK48_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01125 NZ_JAATTN010000009.1 Protein Homology CDS 13620 15410 . - 0 ID=cds-WP_059431069.1;Parent=gene-HGK48_RS01125;Dbxref=GenBank:WP_059431069.1;Name=WP_059431069.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012662270.1;locus_tag=HGK48_RS01125;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_059431069.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq pseudogene 15400 16110 . - . ID=gene-HGK48_RS01130;Name=virB11;end_range=16110,.;gbkey=Gene;gene=virB11;gene_biotype=pseudogene;locus_tag=HGK48_RS01130;partial=true;pseudo=true NZ_JAATTN010000009.1 Protein Homology CDS 15400 16110 . - 0 ID=cds-HGK48_RS01130;Parent=gene-HGK48_RS01130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0044097,GO:0043684;end_range=16110,.;gbkey=CDS;gene=virB11;go_component=type IV secretion system complex|0043684||IEA;go_process=secretion by the type IV secretion system|0044097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803312.1;locus_tag=HGK48_RS01130;partial=true;product=P-type DNA transfer ATPase VirB11;pseudo=true;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 16095 16340 . + . ID=gene-HGK48_RS01135;Name=HGK48_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01135 NZ_JAATTN010000009.1 GeneMarkS-2+ CDS 16095 16340 . + 0 ID=cds-WP_168236636.1;Parent=gene-HGK48_RS01135;Dbxref=GenBank:WP_168236636.1;Name=WP_168236636.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=HGK48_RS01135;product=hypothetical protein;protein_id=WP_168236636.1;transl_table=11 NZ_JAATTN010000009.1 RefSeq gene 16448 17083 . + . ID=gene-HGK48_RS01140;Name=HGK48_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HGK48_RS01140 NZ_JAATTN010000009.1 Protein Homology CDS 16448 17083 . + 0 ID=cds-WP_024305423.1;Parent=gene-HGK48_RS01140;Dbxref=GenBank:WP_024305423.1;Name=WP_024305423.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002945359.1;locus_tag=HGK48_RS01140;product=zeta toxin family protein;protein_id=WP_024305423.1;transl_table=11 ###