##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM308617v2
#!genome-build-accession NCBI_Assembly:GCF_003086175.2
#!annotation-date 08/05/2025 10:36:09
#!annotation-source NCBI RefSeq GCF_003086175.2-RS_2025_08_05
##sequence-region NZ_PCFD01000001.1 1 188385
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000001.1	RefSeq	region	1	188385	.	+	.	ID=NZ_PCFD01000001.1:1..188385;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000001.1	RefSeq	gene	1	125	.	-	.	ID=gene-CP553_RS00005;Name=CP553_RS00005;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS00005;old_locus_tag=CP553_00005;partial=true;start_range=.,1
NZ_PCFD01000001.1	cmsearch	rRNA	1	125	.	-	.	ID=rna-CP553_RS00005;Parent=gene-CP553_RS00005;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS00005;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000001.1	cmsearch	exon	1	125	.	-	.	ID=exon-CP553_RS00005-1;Parent=rna-CP553_RS00005;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS00005;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000001.1	RefSeq	gene	901	1497	.	-	.	ID=gene-CP553_RS00010;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=CP553_RS00010;old_locus_tag=CP553_00010
NZ_PCFD01000001.1	Protein Homology	CDS	901	1497	.	-	0	ID=cds-WP_001829377.1;Parent=gene-CP553_RS00010;Dbxref=GenBank:WP_001829377.1;Name=WP_001829377.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383386.1;locus_tag=CP553_RS00010;product=recombination mediator RecR;protein_id=WP_001829377.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	1504	1821	.	-	.	ID=gene-CP553_RS00015;Name=CP553_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00015;old_locus_tag=CP553_00015
NZ_PCFD01000001.1	Protein Homology	CDS	1504	1821	.	-	0	ID=cds-WP_001829343.1;Parent=gene-CP553_RS00015;Dbxref=GenBank:WP_001829343.1;Name=WP_001829343.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479279.1;locus_tag=CP553_RS00015;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_001829343.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	1910	3616	.	-	.	ID=gene-CP553_RS00020;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=CP553_RS00020;old_locus_tag=CP553_00020
NZ_PCFD01000001.1	Protein Homology	CDS	1910	3616	.	-	0	ID=cds-WP_001829412.1;Parent=gene-CP553_RS00020;Dbxref=GenBank:WP_001829412.1;Name=WP_001829412.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458570.1;locus_tag=CP553_RS00020;product=DNA polymerase III subunit gamma/tau;protein_id=WP_001829412.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	3683	4213	.	-	.	ID=gene-CP553_RS00025;Name=CP553_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00025;old_locus_tag=CP553_00025
NZ_PCFD01000001.1	Protein Homology	CDS	3683	4213	.	-	0	ID=cds-WP_001829347.1;Parent=gene-CP553_RS00025;Dbxref=GenBank:WP_001829347.1;Name=WP_001829347.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458571.1;locus_tag=CP553_RS00025;product=GNAT family N-acetyltransferase;protein_id=WP_001829347.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	4584	4853	.	-	.	ID=gene-CP553_RS00030;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CP553_RS00030;old_locus_tag=CP553_00030
NZ_PCFD01000001.1	cmsearch	SRP_RNA	4584	4853	.	-	.	ID=rna-CP553_RS00030;Parent=gene-CP553_RS00030;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS00030;product=signal recognition particle sRNA large type
NZ_PCFD01000001.1	cmsearch	exon	4584	4853	.	-	.	ID=exon-CP553_RS00030-1;Parent=rna-CP553_RS00030;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS00030;product=signal recognition particle sRNA large type
NZ_PCFD01000001.1	RefSeq	pseudogene	4961	5181	.	-	.	ID=gene-CP553_RS12700;Name=CP553_RS12700;end_range=5181,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12700;old_locus_tag=CP553_00035;partial=true;pseudo=true
NZ_PCFD01000001.1	Protein Homology	CDS	4961	5181	.	-	0	ID=cds-CP553_RS12700;Parent=gene-CP553_RS12700;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5181,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830702.1;locus_tag=CP553_RS12700;partial=true;product=trehalose operon repressor;pseudo=true;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	5371	6366	.	-	.	ID=gene-CP553_RS00035;Name=CP553_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00035;old_locus_tag=CP553_00040
NZ_PCFD01000001.1	Protein Homology	CDS	5371	6366	.	-	0	ID=cds-WP_001829391.1;Parent=gene-CP553_RS00035;Dbxref=GenBank:WP_001829391.1;Name=WP_001829391.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829391.1;locus_tag=CP553_RS00035;product=YeiH family protein;protein_id=WP_001829391.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	6481	7302	.	+	.	ID=gene-CP553_RS00040;Name=CP553_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00040;old_locus_tag=CP553_00045
NZ_PCFD01000001.1	Protein Homology	CDS	6481	7302	.	+	0	ID=cds-WP_001829404.1;Parent=gene-CP553_RS00040;Dbxref=GenBank:WP_001829404.1;Name=WP_001829404.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458575.1;locus_tag=CP553_RS00040;product=LysR family transcriptional regulator;protein_id=WP_001829404.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	7380	7472	.	-	.	ID=gene-CP553_RS00045;Name=CP553_RS00045;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS00045;old_locus_tag=CP553_00050
NZ_PCFD01000001.1	tRNAscan-SE	tRNA	7380	7472	.	-	.	ID=rna-CP553_RS00045;Parent=gene-CP553_RS00045;anticodon=(pos:complement(7434..7436));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS00045;product=tRNA-Ser
NZ_PCFD01000001.1	tRNAscan-SE	exon	7380	7472	.	-	.	ID=exon-CP553_RS00045-1;Parent=rna-CP553_RS00045;anticodon=(pos:complement(7434..7436));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS00045;product=tRNA-Ser
NZ_PCFD01000001.1	RefSeq	gene	7535	8998	.	-	.	ID=gene-CP553_RS00050;Name=CP553_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00050;old_locus_tag=CP553_00055
NZ_PCFD01000001.1	Protein Homology	CDS	7535	8998	.	-	0	ID=cds-WP_001829340.1;Parent=gene-CP553_RS00050;Dbxref=GenBank:WP_001829340.1;Name=WP_001829340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499019.1;locus_tag=CP553_RS00050;product=glutamate synthase subunit beta;protein_id=WP_001829340.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	9016	13512	.	-	.	ID=gene-CP553_RS00055;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=CP553_RS00055;old_locus_tag=CP553_00060
NZ_PCFD01000001.1	Protein Homology	CDS	9016	13512	.	-	0	ID=cds-WP_001832455.1;Parent=gene-CP553_RS00055;Dbxref=GenBank:WP_001832455.1;Name=WP_001832455.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499018.1;locus_tag=CP553_RS00055;product=glutamate synthase large subunit;protein_id=WP_001832455.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	13704	14585	.	+	.	ID=gene-CP553_RS00060;Name=gltC;gbkey=Gene;gene=gltC;gene_biotype=protein_coding;locus_tag=CP553_RS00060;old_locus_tag=CP553_00065
NZ_PCFD01000001.1	Protein Homology	CDS	13704	14585	.	+	0	ID=cds-WP_001829385.1;Parent=gene-CP553_RS00060;Dbxref=GenBank:WP_001829385.1;Name=WP_001829385.1;Ontology_term=GO:1902065,GO:0003700;gbkey=CDS;gene=gltC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=response to L-glutamate|1902065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491712.1;locus_tag=CP553_RS00060;product=glutamate biosynthesis transcriptional regulator GltC;protein_id=WP_001829385.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	14722	15834	.	+	.	ID=gene-CP553_RS00065;Name=CP553_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00065;old_locus_tag=CP553_00070
NZ_PCFD01000001.1	Protein Homology	CDS	14722	15834	.	+	0	ID=cds-WP_002437110.1;Parent=gene-CP553_RS00065;Dbxref=GenBank:WP_002437110.1;Name=WP_002437110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491705.1;locus_tag=CP553_RS00065;product=YibE/F family protein;protein_id=WP_002437110.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	15831	16616	.	+	.	ID=gene-CP553_RS00070;Name=CP553_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00070;old_locus_tag=CP553_00075
NZ_PCFD01000001.1	Protein Homology	CDS	15831	16616	.	+	0	ID=cds-WP_001829362.1;Parent=gene-CP553_RS00070;Dbxref=GenBank:WP_001829362.1;Name=WP_001829362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496944.1;locus_tag=CP553_RS00070;product=YibE/F family protein;protein_id=WP_001829362.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	17129	17515	.	-	.	ID=gene-CP553_RS00075;Name=CP553_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00075;old_locus_tag=CP553_00080
NZ_PCFD01000001.1	Protein Homology	CDS	17129	17515	.	-	0	ID=cds-WP_001829379.1;Parent=gene-CP553_RS00075;Dbxref=GenBank:WP_001829379.1;Name=WP_001829379.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504019.1;locus_tag=CP553_RS00075;product=NUDIX domain-containing protein;protein_id=WP_001829379.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	17703	17981	.	+	.	ID=gene-CP553_RS00080;Name=CP553_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00080;old_locus_tag=CP553_00085
NZ_PCFD01000001.1	Protein Homology	CDS	17703	17981	.	+	0	ID=cds-WP_001829373.1;Parent=gene-CP553_RS00080;Dbxref=GenBank:WP_001829373.1;Name=WP_001829373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829373.1;locus_tag=CP553_RS00080;product=hypothetical protein;protein_id=WP_001829373.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	18356	19861	.	+	.	ID=gene-CP553_RS00085;Name=CP553_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00085;old_locus_tag=CP553_00090
NZ_PCFD01000001.1	Protein Homology	CDS	18356	19861	.	+	0	ID=cds-WP_001832460.1;Parent=gene-CP553_RS00085;Dbxref=GenBank:WP_001832460.1;Name=WP_001832460.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493895.1;locus_tag=CP553_RS00085;product=glycosyltransferase;protein_id=WP_001832460.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	19988	20962	.	-	.	ID=gene-CP553_RS00090;Name=aae;gbkey=Gene;gene=aae;gene_biotype=protein_coding;locus_tag=CP553_RS00090;old_locus_tag=CP553_00095
NZ_PCFD01000001.1	Protein Homology	CDS	19988	20962	.	-	0	ID=cds-WP_001829380.1;Parent=gene-CP553_RS00090;Dbxref=GenBank:WP_001829380.1;Name=WP_001829380.1;gbkey=CDS;gene=aae;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499011.1;locus_tag=CP553_RS00090;product=autolysin/adhesin Aae;protein_id=WP_001829380.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	21487	22332	.	-	.	ID=gene-CP553_RS00095;Name=gmpC;gbkey=Gene;gene=gmpC;gene_biotype=protein_coding;locus_tag=CP553_RS00095;old_locus_tag=CP553_00100
NZ_PCFD01000001.1	Protein Homology	CDS	21487	22332	.	-	0	ID=cds-WP_001829383.1;Parent=gene-CP553_RS00095;Dbxref=GenBank:WP_001829383.1;Name=WP_001829383.1;gbkey=CDS;gene=gmpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496942.1;locus_tag=CP553_RS00095;product=dipeptide ABC transporter glycylmethionine-binding lipoprotein;protein_id=WP_001829383.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	22376	23035	.	-	.	ID=gene-CP553_RS00100;Name=CP553_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00100;old_locus_tag=CP553_00105
NZ_PCFD01000001.1	Protein Homology	CDS	22376	23035	.	-	0	ID=cds-WP_001829353.1;Parent=gene-CP553_RS00100;Dbxref=GenBank:WP_001829353.1;Name=WP_001829353.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499009.1;locus_tag=CP553_RS00100;product=methionine ABC transporter permease;protein_id=WP_001829353.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	23038	24063	.	-	.	ID=gene-CP553_RS00105;Name=CP553_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00105;old_locus_tag=CP553_00110
NZ_PCFD01000001.1	Protein Homology	CDS	23038	24063	.	-	0	ID=cds-WP_001832450.1;Parent=gene-CP553_RS00105;Dbxref=GenBank:WP_001832450.1;Name=WP_001832450.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832450.1;locus_tag=CP553_RS00105;product=methionine ABC transporter ATP-binding protein;protein_id=WP_001832450.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	24310	25455	.	-	.	ID=gene-CP553_RS00110;Name=CP553_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00110;old_locus_tag=CP553_00115
NZ_PCFD01000001.1	Protein Homology	CDS	24310	25455	.	-	0	ID=cds-WP_001829386.1;Parent=gene-CP553_RS00110;Dbxref=GenBank:WP_001829386.1;Name=WP_001829386.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505938.1;locus_tag=CP553_RS00110;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;protein_id=WP_001829386.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	25448	26356	.	-	.	ID=gene-CP553_RS00115;Name=CP553_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00115;old_locus_tag=CP553_00120
NZ_PCFD01000001.1	Protein Homology	CDS	25448	26356	.	-	0	ID=cds-WP_001829369.1;Parent=gene-CP553_RS00115;Dbxref=GenBank:WP_001829369.1;Name=WP_001829369.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475253.1;locus_tag=CP553_RS00115;product=PLP-dependent cysteine synthase family protein;protein_id=WP_001829369.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	26665	27204	.	+	.	ID=gene-CP553_RS00120;Name=CP553_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00120;old_locus_tag=CP553_00125
NZ_PCFD01000001.1	Protein Homology	CDS	26665	27204	.	+	0	ID=cds-WP_001829364.1;Parent=gene-CP553_RS00120;Dbxref=GenBank:WP_001829364.1;Name=WP_001829364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829364.1;locus_tag=CP553_RS00120;product=pentapeptide repeat-containing protein;protein_id=WP_001829364.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	27383	28711	.	-	.	ID=gene-CP553_RS00125;Name=CP553_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00125;old_locus_tag=CP553_00130
NZ_PCFD01000001.1	Protein Homology	CDS	27383	28711	.	-	0	ID=cds-WP_001829393.1;Parent=gene-CP553_RS00125;Dbxref=GenBank:WP_001829393.1;Name=WP_001829393.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502697.1;locus_tag=CP553_RS00125;product=sodium-dependent transporter;protein_id=WP_001829393.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	28856	29098	.	-	.	ID=gene-CP553_RS00130;Name=CP553_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00130;old_locus_tag=CP553_00135
NZ_PCFD01000001.1	Protein Homology	CDS	28856	29098	.	-	0	ID=cds-WP_001829367.1;Parent=gene-CP553_RS00130;Dbxref=GenBank:WP_001829367.1;Name=WP_001829367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490234.1;locus_tag=CP553_RS00130;product=hypothetical protein;protein_id=WP_001829367.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	29113	29841	.	-	.	ID=gene-CP553_RS00135;Name=CP553_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00135;old_locus_tag=CP553_00140
NZ_PCFD01000001.1	Protein Homology	CDS	29113	29841	.	-	0	ID=cds-WP_001829394.1;Parent=gene-CP553_RS00135;Dbxref=GenBank:WP_001829394.1;Name=WP_001829394.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477450.1;locus_tag=CP553_RS00135;product=alpha/beta hydrolase;protein_id=WP_001829394.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	29948	30619	.	-	.	ID=gene-CP553_RS00140;Name=CP553_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00140;old_locus_tag=CP553_00145
NZ_PCFD01000001.1	Protein Homology	CDS	29948	30619	.	-	0	ID=cds-WP_001829381.1;Parent=gene-CP553_RS00140;Dbxref=GenBank:WP_001829381.1;Name=WP_001829381.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494843.1;locus_tag=CP553_RS00140;product=phosphatase PAP2 family protein;protein_id=WP_001829381.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	30871	31119	.	+	.	ID=gene-CP553_RS00145;Name=CP553_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00145;old_locus_tag=CP553_00150
NZ_PCFD01000001.1	Protein Homology	CDS	30871	31119	.	+	0	ID=cds-WP_001829374.1;Parent=gene-CP553_RS00145;Dbxref=GenBank:WP_001829374.1;Name=WP_001829374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493889.1;locus_tag=CP553_RS00145;product=hypothetical protein;protein_id=WP_001829374.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	31161	31529	.	-	.	ID=gene-CP553_RS00150;Name=CP553_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00150;old_locus_tag=CP553_00155
NZ_PCFD01000001.1	Protein Homology	CDS	31161	31529	.	-	0	ID=cds-WP_001829349.1;Parent=gene-CP553_RS00150;Dbxref=GenBank:WP_001829349.1;Name=WP_001829349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829349.1;locus_tag=CP553_RS00150;product=DUF2294 domain-containing protein;protein_id=WP_001829349.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	31642	34209	.	-	.	ID=gene-CP553_RS00155;Name=CP553_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00155;old_locus_tag=CP553_00160
NZ_PCFD01000001.1	Protein Homology	CDS	31642	34209	.	-	0	ID=cds-WP_002437142.1;Parent=gene-CP553_RS00155;Dbxref=GenBank:WP_002437142.1;Name=WP_002437142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437142.1;locus_tag=CP553_RS00155;product=DUF2309 domain-containing protein;protein_id=WP_002437142.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	34227	35711	.	-	.	ID=gene-CP553_RS00160;Name=CP553_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00160;old_locus_tag=CP553_00165
NZ_PCFD01000001.1	Protein Homology	CDS	34227	35711	.	-	0	ID=cds-WP_020368054.1;Parent=gene-CP553_RS00160;Dbxref=GenBank:WP_020368054.1;Name=WP_020368054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082823.1;locus_tag=CP553_RS00160;product=NADH dehydrogenase subunit 5;protein_id=WP_020368054.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	36307	36375	.	+	.	ID=gene-CP553_RS13025;Name=CP553_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS13025
NZ_PCFD01000001.1	Protein Homology	CDS	36307	36375	.	+	0	ID=cds-WP_096824640.1;Parent=gene-CP553_RS13025;Dbxref=GenBank:WP_096824640.1;Name=WP_096824640.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028373.6;locus_tag=CP553_RS13025;product=alpha-1/alpha-2 family phenol-soluble modulin;protein_id=WP_096824640.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	36466	36537	.	+	.	ID=gene-CP553_RS00170;Name=CP553_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00170;old_locus_tag=CP553_00170
NZ_PCFD01000001.1	Protein Homology	CDS	36466	36537	.	+	0	ID=cds-WP_087587975.1;Parent=gene-CP553_RS00170;Dbxref=GenBank:WP_087587975.1;Name=WP_087587975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_087587975.1;locus_tag=CP553_RS00170;product=phenol-soluble modulin PSM-delta;protein_id=WP_087587975.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	36782	37045	.	+	.	ID=gene-CP553_RS00175;Name=CP553_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00175;old_locus_tag=CP553_00175
NZ_PCFD01000001.1	Protein Homology	CDS	36782	37045	.	+	0	ID=cds-WP_001832458.1;Parent=gene-CP553_RS00175;Dbxref=GenBank:WP_001832458.1;Name=WP_001832458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487939.1;locus_tag=CP553_RS00175;product=hypothetical protein;protein_id=WP_001832458.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	37284	38486	.	-	.	ID=gene-CP553_RS00180;Name=CP553_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00180;old_locus_tag=CP553_00180
NZ_PCFD01000001.1	Protein Homology	CDS	37284	38486	.	-	0	ID=cds-WP_001829405.1;Parent=gene-CP553_RS00180;Dbxref=GenBank:WP_001829405.1;Name=WP_001829405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477446.1;locus_tag=CP553_RS00180;product=GTP-binding protein;protein_id=WP_001829405.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	38657	39040	.	-	.	ID=gene-CP553_RS00185;Name=CP553_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00185;old_locus_tag=CP553_00185
NZ_PCFD01000001.1	Protein Homology	CDS	38657	39040	.	-	0	ID=cds-WP_001829355.1;Parent=gene-CP553_RS00185;Dbxref=GenBank:WP_001829355.1;Name=WP_001829355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829355.1;locus_tag=CP553_RS00185;product=VOC family protein;protein_id=WP_001829355.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	39555	40553	.	-	.	ID=gene-CP553_RS00190;Name=CP553_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00190;old_locus_tag=CP553_00190
NZ_PCFD01000001.1	Protein Homology	CDS	39555	40553	.	-	0	ID=cds-WP_224479693.1;Parent=gene-CP553_RS00190;Dbxref=GenBank:WP_224479693.1;Name=WP_224479693.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176782.1;locus_tag=CP553_RS00190;product=PTS sugar transporter subunit IIC;protein_id=WP_224479693.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	40492	40626	.	+	.	ID=gene-CP553_RS12705;Name=CP553_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12705
NZ_PCFD01000001.1	Protein Homology	CDS	40492	40626	.	+	0	ID=cds-WP_161375103.1;Parent=gene-CP553_RS12705;Dbxref=GenBank:WP_161375103.1;Name=WP_161375103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498879.1;locus_tag=CP553_RS12705;product=hypothetical protein;protein_id=WP_161375103.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	pseudogene	40888	41350	.	-	.	ID=gene-CP553_RS00195;Name=CP553_RS00195;end_range=41350,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS00195;old_locus_tag=CP553_00195;partial=true;pseudo=true
NZ_PCFD01000001.1	Protein Homology	CDS	40888	41350	.	-	0	ID=cds-CP553_RS00195;Parent=gene-CP553_RS00195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=41350,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498649.1;locus_tag=CP553_RS00195;partial=true;product=NAD(P)H-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	41910	42527	.	+	.	ID=gene-CP553_RS00200;Name=CP553_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00200;old_locus_tag=CP553_00205
NZ_PCFD01000001.1	Protein Homology	CDS	41910	42527	.	+	0	ID=cds-WP_002437146.1;Parent=gene-CP553_RS00200;Dbxref=GenBank:WP_002437146.1;Name=WP_002437146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829359.1;locus_tag=CP553_RS00200;product=DUF4352 domain-containing protein;protein_id=WP_002437146.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	42637	43191	.	+	.	ID=gene-CP553_RS00205;Name=CP553_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00205;old_locus_tag=CP553_00210
NZ_PCFD01000001.1	Protein Homology	CDS	42637	43191	.	+	0	ID=cds-WP_001829365.1;Parent=gene-CP553_RS00205;Dbxref=GenBank:WP_001829365.1;Name=WP_001829365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489643.1;locus_tag=CP553_RS00205;product=hypothetical protein;protein_id=WP_001829365.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	43269	43496	.	+	.	ID=gene-CP553_RS12955;Name=CP553_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12955;old_locus_tag=CP553_00215
NZ_PCFD01000001.1	GeneMarkS-2+	CDS	43269	43496	.	+	0	ID=cds-WP_002437147.1;Parent=gene-CP553_RS12955;Dbxref=GenBank:WP_002437147.1;Name=WP_002437147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS12955;product=hypothetical protein;protein_id=WP_002437147.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	43652	43900	.	+	.	ID=gene-CP553_RS12960;Name=CP553_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12960;old_locus_tag=CP553_00220
NZ_PCFD01000001.1	Protein Homology	CDS	43652	43900	.	+	0	ID=cds-WP_001829342.1;Parent=gene-CP553_RS12960;Dbxref=GenBank:WP_001829342.1;Name=WP_001829342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485226.1;locus_tag=CP553_RS12960;product=hypothetical protein;protein_id=WP_001829342.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	43863	44447	.	+	.	ID=gene-CP553_RS12965;Name=CP553_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12965;old_locus_tag=CP553_00225
NZ_PCFD01000001.1	Protein Homology	CDS	43863	44447	.	+	0	ID=cds-WP_001829376.1;Parent=gene-CP553_RS12965;Dbxref=GenBank:WP_001829376.1;Name=WP_001829376.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=CP553_RS12965;product=tyrosine-type recombinase/integrase;protein_id=WP_001829376.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	44450	45355	.	+	.	ID=gene-CP553_RS00215;Name=CP553_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00215;old_locus_tag=CP553_00230
NZ_PCFD01000001.1	Protein Homology	CDS	44450	45355	.	+	0	ID=cds-WP_002437151.1;Parent=gene-CP553_RS00215;Dbxref=GenBank:WP_002437151.1;Name=WP_002437151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501935.1;locus_tag=CP553_RS00215;product=Abi family protein;protein_id=WP_002437151.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	45596	47137	.	-	.	ID=gene-CP553_RS00220;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=CP553_RS00220;old_locus_tag=CP553_00235
NZ_PCFD01000001.1	Protein Homology	CDS	45596	47137	.	-	0	ID=cds-WP_001829351.1;Parent=gene-CP553_RS00220;Dbxref=GenBank:WP_001829351.1;Name=WP_001829351.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=CP553_RS00220;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_001829351.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	47304	48770	.	-	.	ID=gene-CP553_RS00225;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=CP553_RS00225;old_locus_tag=CP553_00240
NZ_PCFD01000001.1	Protein Homology	CDS	47304	48770	.	-	0	ID=cds-WP_001829407.1;Parent=gene-CP553_RS00225;Dbxref=GenBank:WP_001829407.1;Name=WP_001829407.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=CP553_RS00225;product=IMP dehydrogenase;protein_id=WP_001829407.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	48808	50076	.	-	.	ID=gene-CP553_RS00230;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=protein_coding;locus_tag=CP553_RS00230;old_locus_tag=CP553_00245
NZ_PCFD01000001.1	Protein Homology	CDS	48808	50076	.	-	0	ID=cds-WP_002437157.1;Parent=gene-CP553_RS00230;Dbxref=GenBank:WP_002437157.1;Name=WP_002437157.1;gbkey=CDS;gene=pbuX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793018.1;locus_tag=CP553_RS00230;product=xanthine permease PbuX;protein_id=WP_002437157.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	50076	50654	.	-	.	ID=gene-CP553_RS00235;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=CP553_RS00235;old_locus_tag=CP553_00250
NZ_PCFD01000001.1	Protein Homology	CDS	50076	50654	.	-	0	ID=cds-WP_001829410.1;Parent=gene-CP553_RS00235;Dbxref=GenBank:WP_001829410.1;Name=WP_001829410.1;Ontology_term=GO:0043101,GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829410.1;locus_tag=CP553_RS00235;product=xanthine phosphoribosyltransferase;protein_id=WP_001829410.1;transl_table=11
NZ_PCFD01000001.1	cmsearch	riboswitch	50937	51039	.	-	.	ID=id-NZ_PCFD01000001.1:50937..51039;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000001.1	RefSeq	gene	51251	51658	.	+	.	ID=gene-CP553_RS00240;Name=CP553_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00240;old_locus_tag=CP553_00255
NZ_PCFD01000001.1	Protein Homology	CDS	51251	51658	.	+	0	ID=cds-WP_001829411.1;Parent=gene-CP553_RS00240;Dbxref=GenBank:WP_001829411.1;Name=WP_001829411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497457.1;locus_tag=CP553_RS00240;product=general stress protein;protein_id=WP_001829411.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	51786	52451	.	+	.	ID=gene-CP553_RS00245;Name=CP553_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00245;old_locus_tag=CP553_00260
NZ_PCFD01000001.1	Protein Homology	CDS	51786	52451	.	+	0	ID=cds-WP_001829400.1;Parent=gene-CP553_RS00245;Dbxref=GenBank:WP_001829400.1;Name=WP_001829400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498185.1;locus_tag=CP553_RS00245;product=hypothetical protein;protein_id=WP_001829400.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	52577	53479	.	+	.	ID=gene-CP553_RS00250;Name=CP553_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00250;old_locus_tag=CP553_00265
NZ_PCFD01000001.1	Protein Homology	CDS	52577	53479	.	+	0	ID=cds-WP_001829387.1;Parent=gene-CP553_RS00250;Dbxref=GenBank:WP_001829387.1;Name=WP_001829387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468659.1;locus_tag=CP553_RS00250;product=hypothetical protein;protein_id=WP_001829387.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	53788	55176	.	+	.	ID=gene-CP553_RS00255;Name=CP553_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00255;old_locus_tag=CP553_00275
NZ_PCFD01000001.1	Protein Homology	CDS	53788	55176	.	+	0	ID=cds-WP_002437162.1;Parent=gene-CP553_RS00255;Dbxref=GenBank:WP_002437162.1;Name=WP_002437162.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458603.1;locus_tag=CP553_RS00255;product=L-cystine transporter;protein_id=WP_002437162.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	55298	56053	.	-	.	ID=gene-CP553_RS00260;Name=CP553_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00260;old_locus_tag=CP553_00280
NZ_PCFD01000001.1	Protein Homology	CDS	55298	56053	.	-	0	ID=cds-WP_002455899.1;Parent=gene-CP553_RS00260;Dbxref=GenBank:WP_002455899.1;Name=WP_002455899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455899.1;locus_tag=CP553_RS00260;product=NADPH-dependent oxidoreductase;protein_id=WP_002455899.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	56194	56973	.	+	.	ID=gene-CP553_RS00265;Name=CP553_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00265;old_locus_tag=CP553_00285
NZ_PCFD01000001.1	Protein Homology	CDS	56194	56973	.	+	0	ID=cds-WP_002437166.1;Parent=gene-CP553_RS00265;Dbxref=GenBank:WP_002437166.1;Name=WP_002437166.1;Ontology_term=GO:0008684,GO:0030145;gbkey=CDS;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455900.1;locus_tag=CP553_RS00265;product=2-keto-4-pentenoate hydratase;protein_id=WP_002437166.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	57418	57987	.	+	.	ID=gene-CP553_RS00270;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=CP553_RS00270;old_locus_tag=CP553_00290
NZ_PCFD01000001.1	Protein Homology	CDS	57418	57987	.	+	0	ID=cds-WP_002437170.1;Parent=gene-CP553_RS00270;Dbxref=GenBank:WP_002437170.1;Name=WP_002437170.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445177.1;locus_tag=CP553_RS00270;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_002437170.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	58002	59525	.	+	.	ID=gene-CP553_RS00275;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=CP553_RS00275;old_locus_tag=CP553_00295
NZ_PCFD01000001.1	Protein Homology	CDS	58002	59525	.	+	0	ID=cds-WP_002437172.1;Parent=gene-CP553_RS00275;Dbxref=GenBank:WP_002437172.1;Name=WP_002437172.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498953.1;locus_tag=CP553_RS00275;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_002437172.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	59774	60397	.	+	.	ID=gene-CP553_RS00280;Name=CP553_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00280;old_locus_tag=CP553_00305
NZ_PCFD01000001.1	Protein Homology	CDS	59774	60397	.	+	0	ID=cds-WP_002437175.1;Parent=gene-CP553_RS00280;Dbxref=GenBank:WP_002437175.1;Name=WP_002437175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475263.1;locus_tag=CP553_RS00280;product=NDxxF motif lipoprotein;protein_id=WP_002437175.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	60617	60994	.	+	.	ID=gene-CP553_RS00285;Name=CP553_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00285;old_locus_tag=CP553_00315
NZ_PCFD01000001.1	Protein Homology	CDS	60617	60994	.	+	0	ID=cds-WP_002437185.1;Parent=gene-CP553_RS00285;Dbxref=GenBank:WP_002437185.1;Name=WP_002437185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830923.1;locus_tag=CP553_RS00285;product=hypothetical protein;protein_id=WP_002437185.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	61353	61943	.	-	.	ID=gene-CP553_RS00290;Name=CP553_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00290;old_locus_tag=CP553_00325
NZ_PCFD01000001.1	Protein Homology	CDS	61353	61943	.	-	0	ID=cds-WP_002437189.1;Parent=gene-CP553_RS00290;Dbxref=GenBank:WP_002437189.1;Name=WP_002437189.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437189.1;locus_tag=CP553_RS00290;product=histidine phosphatase family protein;protein_id=WP_002437189.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	61964	62596	.	-	.	ID=gene-CP553_RS00295;Name=CP553_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00295;old_locus_tag=CP553_00330
NZ_PCFD01000001.1	Protein Homology	CDS	61964	62596	.	-	0	ID=cds-WP_002437191.1;Parent=gene-CP553_RS00295;Dbxref=GenBank:WP_002437191.1;Name=WP_002437191.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437191.1;locus_tag=CP553_RS00295;product=LysE family translocator;protein_id=WP_002437191.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	pseudogene	62759	62848	.	+	.	ID=gene-CP553_RS12710;Name=CP553_RS12710;end_range=62848,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12710;partial=true;pseudo=true
NZ_PCFD01000001.1	Protein Homology	CDS	62759	62848	.	+	0	ID=cds-CP553_RS12710;Parent=gene-CP553_RS12710;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=62848,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498948.1;locus_tag=CP553_RS12710;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	63070	63324	.	-	.	ID=gene-CP553_RS00300;Name=CP553_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00300;old_locus_tag=CP553_00335
NZ_PCFD01000001.1	Protein Homology	CDS	63070	63324	.	-	0	ID=cds-WP_001832461.1;Parent=gene-CP553_RS00300;Dbxref=GenBank:WP_001832461.1;Name=WP_001832461.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832461.1;locus_tag=CP553_RS00300;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_001832461.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	63546	63806	.	+	.	ID=gene-CP553_RS00305;Name=CP553_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00305;old_locus_tag=CP553_00340
NZ_PCFD01000001.1	Protein Homology	CDS	63546	63806	.	+	0	ID=cds-WP_002437194.1;Parent=gene-CP553_RS00305;Dbxref=GenBank:WP_002437194.1;Name=WP_002437194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458611.1;locus_tag=CP553_RS00305;product=hypothetical protein;protein_id=WP_002437194.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	64275	64517	.	-	.	ID=gene-CP553_RS00310;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=CP553_RS00310;old_locus_tag=CP553_00350
NZ_PCFD01000001.1	Protein Homology	CDS	64275	64517	.	-	0	ID=cds-WP_001831354.1;Parent=gene-CP553_RS00310;Dbxref=GenBank:WP_001831354.1;Name=WP_001831354.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484306.1;locus_tag=CP553_RS00310;product=30S ribosomal protein S18;protein_id=WP_001831354.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	64562	65071	.	-	.	ID=gene-CP553_RS00315;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=CP553_RS00315;old_locus_tag=CP553_00355
NZ_PCFD01000001.1	Protein Homology	CDS	64562	65071	.	-	0	ID=cds-WP_001831333.1;Parent=gene-CP553_RS00315;Dbxref=GenBank:WP_001831333.1;Name=WP_001831333.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498938.1;locus_tag=CP553_RS00315;product=single-stranded DNA-binding protein;protein_id=WP_001831333.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	65094	65390	.	-	.	ID=gene-CP553_RS00320;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=CP553_RS00320;old_locus_tag=CP553_00360
NZ_PCFD01000001.1	Protein Homology	CDS	65094	65390	.	-	0	ID=cds-WP_001831345.1;Parent=gene-CP553_RS00320;Dbxref=GenBank:WP_001831345.1;Name=WP_001831345.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831345.1;locus_tag=CP553_RS00320;product=30S ribosomal protein S6;protein_id=WP_001831345.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	65775	66584	.	+	.	ID=gene-CP553_RS00325;Name=CP553_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00325;old_locus_tag=CP553_00365
NZ_PCFD01000001.1	Protein Homology	CDS	65775	66584	.	+	0	ID=cds-WP_002437208.1;Parent=gene-CP553_RS00325;Dbxref=GenBank:WP_002437208.1;Name=WP_002437208.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490221.1;locus_tag=CP553_RS00325;product=GH25 family lysozyme;protein_id=WP_002437208.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	66658	66849	.	+	.	ID=gene-CP553_RS00330;Name=CP553_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00330;old_locus_tag=CP553_00370
NZ_PCFD01000001.1	Protein Homology	CDS	66658	66849	.	+	0	ID=cds-WP_001831355.1;Parent=gene-CP553_RS00330;Dbxref=GenBank:WP_001831355.1;Name=WP_001831355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498936.1;locus_tag=CP553_RS00330;product=hypothetical protein;protein_id=WP_001831355.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	67082	68179	.	-	.	ID=gene-CP553_RS00335;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=CP553_RS00335;old_locus_tag=CP553_00375
NZ_PCFD01000001.1	Protein Homology	CDS	67082	68179	.	-	0	ID=cds-WP_001831336.1;Parent=gene-CP553_RS00335;Dbxref=GenBank:WP_001831336.1;Name=WP_001831336.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1;locus_tag=CP553_RS00335;product=redox-regulated ATPase YchF;protein_id=WP_001831336.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	68191	68394	.	-	.	ID=gene-CP553_RS00340;Name=CP553_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00340;old_locus_tag=CP553_00380
NZ_PCFD01000001.1	Protein Homology	CDS	68191	68394	.	-	0	ID=cds-WP_001831361.1;Parent=gene-CP553_RS00340;Dbxref=GenBank:WP_001831361.1;Name=WP_001831361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831361.1;locus_tag=CP553_RS00340;product=DUF951 domain-containing protein;protein_id=WP_001831361.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	68415	69290	.	-	.	ID=gene-CP553_RS00345;Name=CP553_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00345;old_locus_tag=CP553_00385
NZ_PCFD01000001.1	Protein Homology	CDS	68415	69290	.	-	0	ID=cds-WP_001832526.1;Parent=gene-CP553_RS00345;Dbxref=GenBank:WP_001832526.1;Name=WP_001832526.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470460.1;locus_tag=CP553_RS00345;product=mechanosensitive ion channel family protein;protein_id=WP_001832526.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	69445	70287	.	-	.	ID=gene-CP553_RS00350;Name=CP553_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00350;old_locus_tag=CP553_00390
NZ_PCFD01000001.1	Protein Homology	CDS	69445	70287	.	-	0	ID=cds-WP_002437214.1;Parent=gene-CP553_RS00350;Dbxref=GenBank:WP_002437214.1;Name=WP_002437214.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437214.1;locus_tag=CP553_RS00350;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_002437214.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	71016	72119	.	+	.	ID=gene-CP553_RS00355;Name=CP553_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00355;old_locus_tag=CP553_00400
NZ_PCFD01000001.1	Protein Homology	CDS	71016	72119	.	+	0	ID=cds-WP_002486191.1;Parent=gene-CP553_RS00355;Dbxref=GenBank:WP_002486191.1;Name=WP_002486191.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486191.1;locus_tag=CP553_RS00355;product=PLP-dependent transferase;protein_id=WP_002486191.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	72116	73291	.	+	.	ID=gene-CP553_RS00360;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=CP553_RS00360;old_locus_tag=CP553_00405
NZ_PCFD01000001.1	Protein Homology	CDS	72116	73291	.	+	0	ID=cds-WP_002437219.1;Parent=gene-CP553_RS00360;Dbxref=GenBank:WP_002437219.1;Name=WP_002437219.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499194.1;locus_tag=CP553_RS00360;product=cystathionine beta-lyase MetC;protein_id=WP_002437219.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	73245	75083	.	+	.	ID=gene-CP553_RS00365;Name=CP553_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00365;old_locus_tag=CP553_00410
NZ_PCFD01000001.1	Protein Homology	CDS	73245	75083	.	+	0	ID=cds-WP_002437221.1;Parent=gene-CP553_RS00365;Dbxref=GenBank:WP_002437221.1;Name=WP_002437221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498929.1;locus_tag=CP553_RS00365;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WP_002437221.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	75080	77326	.	+	.	ID=gene-CP553_RS00370;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=CP553_RS00370;old_locus_tag=CP553_00415
NZ_PCFD01000001.1	Protein Homology	CDS	75080	77326	.	+	0	ID=cds-WP_002437223.1;Parent=gene-CP553_RS00370;Dbxref=GenBank:WP_002437223.1;Name=WP_002437223.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437223.1;locus_tag=CP553_RS00370;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_002437223.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	77348	78091	.	+	.	ID=gene-CP553_RS00375;Name=CP553_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00375;old_locus_tag=CP553_00420
NZ_PCFD01000001.1	Protein Homology	CDS	77348	78091	.	+	0	ID=cds-WP_001831362.1;Parent=gene-CP553_RS00375;Dbxref=GenBank:WP_001831362.1;Name=WP_001831362.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487128.1;locus_tag=CP553_RS00375;product=cyclase family protein;protein_id=WP_001831362.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	78309	79493	.	-	.	ID=gene-CP553_RS00380;Name=CP553_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00380;old_locus_tag=CP553_00425
NZ_PCFD01000001.1	Protein Homology	CDS	78309	79493	.	-	0	ID=cds-WP_001831350.1;Parent=gene-CP553_RS00380;Dbxref=GenBank:WP_001831350.1;Name=WP_001831350.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489335.1;locus_tag=CP553_RS00380;product=acetyl-CoA C-acetyltransferase;protein_id=WP_001831350.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	79509	79721	.	-	.	ID=gene-CP553_RS00385;Name=CP553_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00385;old_locus_tag=CP553_00430
NZ_PCFD01000001.1	Protein Homology	CDS	79509	79721	.	-	0	ID=cds-WP_002456823.1;Parent=gene-CP553_RS00385;Dbxref=GenBank:WP_002456823.1;Name=WP_002456823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456823.1;locus_tag=CP553_RS00385;product=hypothetical protein;protein_id=WP_002456823.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	80339	80539	.	-	.	ID=gene-CP553_RS00390;Name=CP553_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00390;old_locus_tag=CP553_00435
NZ_PCFD01000001.1	Protein Homology	CDS	80339	80539	.	-	0	ID=cds-WP_001831332.1;Parent=gene-CP553_RS00390;Dbxref=GenBank:WP_001831332.1;Name=WP_001831332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455913.1;locus_tag=CP553_RS00390;product=sterile alpha motif-like domain-containing protein;protein_id=WP_001831332.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	80825	81028	.	+	.	ID=gene-CP553_RS00395;Name=CP553_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00395;old_locus_tag=CP553_00440
NZ_PCFD01000001.1	Protein Homology	CDS	80825	81028	.	+	0	ID=cds-WP_001831346.1;Parent=gene-CP553_RS00395;Dbxref=GenBank:WP_001831346.1;Name=WP_001831346.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493858.1;locus_tag=CP553_RS00395;product=helix-turn-helix transcriptional regulator;protein_id=WP_001831346.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	81025	81759	.	+	.	ID=gene-CP553_RS00400;Name=CP553_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00400;old_locus_tag=CP553_00445
NZ_PCFD01000001.1	Protein Homology	CDS	81025	81759	.	+	0	ID=cds-WP_002437234.1;Parent=gene-CP553_RS00400;Dbxref=GenBank:WP_002437234.1;Name=WP_002437234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503280.1;locus_tag=CP553_RS00400;product=DUF3169 family protein;protein_id=WP_002437234.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	81787	82629	.	+	.	ID=gene-CP553_RS00405;Name=CP553_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00405;old_locus_tag=CP553_00450
NZ_PCFD01000001.1	Protein Homology	CDS	81787	82629	.	+	0	ID=cds-WP_002437236.1;Parent=gene-CP553_RS00405;Dbxref=GenBank:WP_002437236.1;Name=WP_002437236.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447667.1;locus_tag=CP553_RS00405;product=ABC transporter ATP-binding protein;protein_id=WP_002437236.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	82629	83267	.	+	.	ID=gene-CP553_RS00410;Name=CP553_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00410;old_locus_tag=CP553_00455
NZ_PCFD01000001.1	Protein Homology	CDS	82629	83267	.	+	0	ID=cds-WP_002437239.1;Parent=gene-CP553_RS00410;Dbxref=GenBank:WP_002437239.1;Name=WP_002437239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503278.1;locus_tag=CP553_RS00410;product=ABC-2 transporter permease;protein_id=WP_002437239.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	83418	83648	.	+	.	ID=gene-CP553_RS00415;Name=elxI1;gbkey=Gene;gene=elxI1;gene_biotype=protein_coding;locus_tag=CP553_RS00415;old_locus_tag=CP553_00460
NZ_PCFD01000001.1	Protein Homology	CDS	83418	83648	.	+	0	ID=cds-WP_001831347.1;Parent=gene-CP553_RS00415;Dbxref=GenBank:WP_001831347.1;Name=WP_001831347.1;gbkey=CDS;gene=elxI1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493854.1;locus_tag=CP553_RS00415;product=epilancin biosynthesis-related protein ElxI1;protein_id=WP_001831347.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	84124	84588	.	+	.	ID=gene-CP553_RS00420;Name=CP553_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00420;old_locus_tag=CP553_00465
NZ_PCFD01000001.1	Protein Homology	CDS	84124	84588	.	+	0	ID=cds-WP_001831338.1;Parent=gene-CP553_RS00420;Dbxref=GenBank:WP_001831338.1;Name=WP_001831338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490240.1;locus_tag=CP553_RS00420;product=bacillithiol transferase BstA;protein_id=WP_001831338.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	84710	85258	.	-	.	ID=gene-CP553_RS00425;Name=CP553_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00425;old_locus_tag=CP553_00470
NZ_PCFD01000001.1	Protein Homology	CDS	84710	85258	.	-	0	ID=cds-WP_002437244.1;Parent=gene-CP553_RS00425;Dbxref=GenBank:WP_002437244.1;Name=WP_002437244.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505005.1;locus_tag=CP553_RS00425;product=GNAT family N-acetyltransferase;protein_id=WP_002437244.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	85656	87161	.	+	.	ID=gene-CP553_RS00430;Name=CP553_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00430;old_locus_tag=CP553_00475
NZ_PCFD01000001.1	Protein Homology	CDS	85656	87161	.	+	0	ID=cds-WP_002456822.1;Parent=gene-CP553_RS00430;Dbxref=GenBank:WP_002456822.1;Name=WP_002456822.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831363.1;locus_tag=CP553_RS00430;product=glycosyltransferase family 4 protein;protein_id=WP_002456822.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	87237	88871	.	-	.	ID=gene-CP553_RS00435;Name=CP553_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00435;old_locus_tag=CP553_00480
NZ_PCFD01000001.1	Protein Homology	CDS	87237	88871	.	-	0	ID=cds-WP_002437250.1;Parent=gene-CP553_RS00435;Dbxref=GenBank:WP_002437250.1;Name=WP_002437250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473812.1;locus_tag=CP553_RS00435;product=hypothetical protein;protein_id=WP_002437250.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	88956	94484	.	-	.	ID=gene-CP553_RS00440;Name=CP553_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00440;old_locus_tag=CP553_00485
NZ_PCFD01000001.1	Protein Homology	CDS	88956	94484	.	-	0	ID=cds-WP_116842971.1;Parent=gene-CP553_RS00440;Dbxref=GenBank:WP_116842971.1;Name=WP_116842971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_216678631.1;locus_tag=CP553_RS00440;product=SdrD B-like domain-containing protein;protein_id=WP_116842971.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	95889	97253	.	+	.	ID=gene-CP553_RS00445;Name=CP553_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00445;old_locus_tag=CP553_00490
NZ_PCFD01000001.1	Protein Homology	CDS	95889	97253	.	+	0	ID=cds-WP_165798621.1;Parent=gene-CP553_RS00445;Dbxref=GenBank:WP_165798621.1;Name=WP_165798621.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489332.1;locus_tag=CP553_RS00445;product=MFS transporter;protein_id=WP_165798621.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	97315	97893	.	-	.	ID=gene-CP553_RS00450;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CP553_RS00450;old_locus_tag=CP553_00495
NZ_PCFD01000001.1	Protein Homology	CDS	97315	97893	.	-	0	ID=cds-WP_002437258.1;Parent=gene-CP553_RS00450;Dbxref=GenBank:WP_002437258.1;Name=WP_002437258.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437258.1;locus_tag=CP553_RS00450;product=signal peptidase I;protein_id=WP_002437258.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	97959	98603	.	-	.	ID=gene-CP553_RS00455;Name=CP553_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00455;old_locus_tag=CP553_00500
NZ_PCFD01000001.1	Protein Homology	CDS	97959	98603	.	-	0	ID=cds-WP_002470130.1;Parent=gene-CP553_RS00455;Dbxref=GenBank:WP_002470130.1;Name=WP_002470130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470130.1;locus_tag=CP553_RS00455;product=hypothetical protein;protein_id=WP_002470130.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	98619	98999	.	-	.	ID=gene-CP553_RS00460;Name=CP553_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00460;old_locus_tag=CP553_00505
NZ_PCFD01000001.1	Protein Homology	CDS	98619	98999	.	-	0	ID=cds-WP_001831755.1;Parent=gene-CP553_RS00460;Dbxref=GenBank:WP_001831755.1;Name=WP_001831755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831755.1;locus_tag=CP553_RS00460;product=LptM family lipoprotein;protein_id=WP_001831755.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	99293	100051	.	+	.	ID=gene-CP553_RS00465;Name=CP553_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00465;old_locus_tag=CP553_00510
NZ_PCFD01000001.1	Protein Homology	CDS	99293	100051	.	+	0	ID=cds-WP_002437267.1;Parent=gene-CP553_RS00465;Dbxref=GenBank:WP_002437267.1;Name=WP_002437267.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831790.1;locus_tag=CP553_RS00465;product=ABC transporter ATP-binding protein;protein_id=WP_002437267.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	100041	101921	.	+	.	ID=gene-CP553_RS00470;Name=CP553_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00470;old_locus_tag=CP553_00515
NZ_PCFD01000001.1	Protein Homology	CDS	100041	101921	.	+	0	ID=cds-WP_002437268.1;Parent=gene-CP553_RS00470;Dbxref=GenBank:WP_002437268.1;Name=WP_002437268.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490219.1;locus_tag=CP553_RS00470;product=FtsX-like permease family protein;protein_id=WP_002437268.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	101966	102157	.	+	.	ID=gene-CP553_RS00475;Name=CP553_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00475;old_locus_tag=CP553_00520
NZ_PCFD01000001.1	Protein Homology	CDS	101966	102157	.	+	0	ID=cds-WP_001831751.1;Parent=gene-CP553_RS00475;Dbxref=GenBank:WP_001831751.1;Name=WP_001831751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447657.1;locus_tag=CP553_RS00475;product=VraH family peptide resistance protein;protein_id=WP_001831751.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	102229	104274	.	-	.	ID=gene-CP553_RS00480;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CP553_RS00480;old_locus_tag=CP553_00525
NZ_PCFD01000001.1	Protein Homology	CDS	102229	104274	.	-	0	ID=cds-WP_002437272.1;Parent=gene-CP553_RS00480;Dbxref=GenBank:WP_002437272.1;Name=WP_002437272.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489777.1;locus_tag=CP553_RS00480;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_002437272.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	105277	106473	.	-	.	ID=gene-CP553_RS00485;Name=CP553_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00485;old_locus_tag=CP553_00535
NZ_PCFD01000001.1	Protein Homology	CDS	105277	106473	.	-	0	ID=cds-WP_001831769.1;Parent=gene-CP553_RS00485;Dbxref=GenBank:WP_001831769.1;Name=WP_001831769.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497469.1;locus_tag=CP553_RS00485;product=ABC transporter permease;protein_id=WP_001831769.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	106466	107152	.	-	.	ID=gene-CP553_RS00490;Name=CP553_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00490;old_locus_tag=CP553_00540
NZ_PCFD01000001.1	Protein Homology	CDS	106466	107152	.	-	0	ID=cds-WP_001831756.1;Parent=gene-CP553_RS00490;Dbxref=GenBank:WP_001831756.1;Name=WP_001831756.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468936.1;locus_tag=CP553_RS00490;product=ABC transporter ATP-binding protein;protein_id=WP_001831756.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	107149	108267	.	-	.	ID=gene-CP553_RS00495;Name=CP553_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00495;old_locus_tag=CP553_00545
NZ_PCFD01000001.1	Protein Homology	CDS	107149	108267	.	-	0	ID=cds-WP_002437277.1;Parent=gene-CP553_RS00495;Dbxref=GenBank:WP_002437277.1;Name=WP_002437277.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831820.1;locus_tag=CP553_RS00495;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_002437277.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	108506	109135	.	+	.	ID=gene-CP553_RS00500;Name=CP553_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00500;old_locus_tag=CP553_00550
NZ_PCFD01000001.1	Protein Homology	CDS	108506	109135	.	+	0	ID=cds-WP_002437279.1;Parent=gene-CP553_RS00500;Dbxref=GenBank:WP_002437279.1;Name=WP_002437279.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489054.1;locus_tag=CP553_RS00500;product=YIP1 family protein;protein_id=WP_002437279.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	109323	109892	.	-	.	ID=gene-CP553_RS00505;Name=CP553_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00505;old_locus_tag=CP553_00555
NZ_PCFD01000001.1	Protein Homology	CDS	109323	109892	.	-	0	ID=cds-WP_002437281.1;Parent=gene-CP553_RS00505;Dbxref=GenBank:WP_002437281.1;Name=WP_002437281.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366353.1;locus_tag=CP553_RS00505;product=helix-turn-helix transcriptional regulator;protein_id=WP_002437281.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	110112	110651	.	-	.	ID=gene-CP553_RS00510;Name=CP553_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00510;old_locus_tag=CP553_00560
NZ_PCFD01000001.1	Protein Homology	CDS	110112	110651	.	-	0	ID=cds-WP_002437284.1;Parent=gene-CP553_RS00510;Dbxref=GenBank:WP_002437284.1;Name=WP_002437284.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490035.1;locus_tag=CP553_RS00510;product=TetR/AcrR family transcriptional regulator;protein_id=WP_002437284.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	110617	111012	.	-	.	ID=gene-CP553_RS00515;Name=CP553_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00515;old_locus_tag=CP553_00565
NZ_PCFD01000001.1	Protein Homology	CDS	110617	111012	.	-	0	ID=cds-WP_001831775.1;Parent=gene-CP553_RS00515;Dbxref=GenBank:WP_001831775.1;Name=WP_001831775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502257.1;locus_tag=CP553_RS00515;product=DUF3147 family protein;protein_id=WP_001831775.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	111028	111387	.	-	.	ID=gene-CP553_RS00520;Name=CP553_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00520;old_locus_tag=CP553_00570
NZ_PCFD01000001.1	Protein Homology	CDS	111028	111387	.	-	0	ID=cds-WP_001831810.1;Parent=gene-CP553_RS00520;Dbxref=GenBank:WP_001831810.1;Name=WP_001831810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831810.1;locus_tag=CP553_RS00520;product=DUF3147 family protein;protein_id=WP_001831810.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	111787	112626	.	-	.	ID=gene-CP553_RS00525;Name=noc;gbkey=Gene;gene=noc;gene_biotype=protein_coding;locus_tag=CP553_RS00525;old_locus_tag=CP553_00580
NZ_PCFD01000001.1	Protein Homology	CDS	111787	112626	.	-	0	ID=cds-WP_001831794.1;Parent=gene-CP553_RS00525;Dbxref=GenBank:WP_001831794.1;Name=WP_001831794.1;Ontology_term=GO:0032466,GO:0043565;gbkey=CDS;gene=noc;go_function=sequence-specific DNA binding|0043565||IEA;go_process=negative regulation of cytokinesis|0032466||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501495.1;locus_tag=CP553_RS00525;product=nucleoid occlusion protein;protein_id=WP_001831794.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	112670	113389	.	-	.	ID=gene-CP553_RS00530;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=CP553_RS00530;old_locus_tag=CP553_00585
NZ_PCFD01000001.1	Protein Homology	CDS	112670	113389	.	-	0	ID=cds-WP_002437291.1;Parent=gene-CP553_RS00530;Dbxref=GenBank:WP_002437291.1;Name=WP_002437291.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468576.1;locus_tag=CP553_RS00530;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_002437291.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	113389	115266	.	-	.	ID=gene-CP553_RS00535;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=CP553_RS00535;old_locus_tag=CP553_00590
NZ_PCFD01000001.1	Protein Homology	CDS	113389	115266	.	-	0	ID=cds-WP_032604334.1;Parent=gene-CP553_RS00535;Dbxref=GenBank:WP_032604334.1;Name=WP_032604334.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499187.1;locus_tag=CP553_RS00535;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_032604334.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	115339	116718	.	-	.	ID=gene-CP553_RS00540;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=CP553_RS00540;old_locus_tag=CP553_00595
NZ_PCFD01000001.1	Protein Homology	CDS	115339	116718	.	-	0	ID=cds-WP_002437296.1;Parent=gene-CP553_RS00540;Dbxref=GenBank:WP_002437296.1;Name=WP_002437296.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501498.1;locus_tag=CP553_RS00540;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_002437296.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	116864	117211	.	-	.	ID=gene-CP553_RS00545;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=CP553_RS00545;old_locus_tag=CP553_00600
NZ_PCFD01000001.1	Protein Homology	CDS	116864	117211	.	-	0	ID=cds-WP_001832522.1;Parent=gene-CP553_RS00545;Dbxref=GenBank:WP_001832522.1;Name=WP_001832522.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636722.1;locus_tag=CP553_RS00545;product=ribonuclease P protein component;protein_id=WP_001832522.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	117370	117507	.	-	.	ID=gene-CP553_RS00550;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=CP553_RS00550;old_locus_tag=CP553_00605
NZ_PCFD01000001.1	Protein Homology	CDS	117370	117507	.	-	0	ID=cds-WP_000240855.1;Parent=gene-CP553_RS00550;Dbxref=GenBank:WP_000240855.1;Name=WP_000240855.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1;locus_tag=CP553_RS00550;product=50S ribosomal protein L34;protein_id=WP_000240855.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	118230	119585	.	+	.	ID=gene-CP553_RS00555;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CP553_RS00555;old_locus_tag=CP553_00610
NZ_PCFD01000001.1	Protein Homology	CDS	118230	119585	.	+	0	ID=cds-WP_002455927.1;Parent=gene-CP553_RS00555;Dbxref=GenBank:WP_002455927.1;Name=WP_002455927.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898446.1;locus_tag=CP553_RS00555;product=chromosomal replication initiator protein DnaA;protein_id=WP_002455927.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	119894	121027	.	+	.	ID=gene-CP553_RS00560;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=CP553_RS00560;old_locus_tag=CP553_00615
NZ_PCFD01000001.1	Protein Homology	CDS	119894	121027	.	+	0	ID=cds-WP_001831813.1;Parent=gene-CP553_RS00560;Dbxref=GenBank:WP_001831813.1;Name=WP_001831813.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969809.1;locus_tag=CP553_RS00560;product=DNA polymerase III subunit beta;protein_id=WP_001831813.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	121460	121696	.	+	.	ID=gene-CP553_RS00565;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=CP553_RS00565;old_locus_tag=CP553_00620
NZ_PCFD01000001.1	Protein Homology	CDS	121460	121696	.	+	0	ID=cds-WP_001831806.1;Parent=gene-CP553_RS00565;Dbxref=GenBank:WP_001831806.1;Name=WP_001831806.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yaaA;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000249646.1;locus_tag=CP553_RS00565;product=S4 domain-containing protein YaaA;protein_id=WP_001831806.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	121693	122808	.	+	.	ID=gene-CP553_RS00570;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=CP553_RS00570;old_locus_tag=CP553_00625
NZ_PCFD01000001.1	Protein Homology	CDS	121693	122808	.	+	0	ID=cds-WP_002437307.1;Parent=gene-CP553_RS00570;Dbxref=GenBank:WP_002437307.1;Name=WP_002437307.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498612.1;locus_tag=CP553_RS00570;product=DNA replication/repair protein RecF;protein_id=WP_002437307.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	122819	124750	.	+	.	ID=gene-CP553_RS00575;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=CP553_RS00575;old_locus_tag=CP553_00630
NZ_PCFD01000001.1	Protein Homology	CDS	122819	124750	.	+	0	ID=cds-WP_001831817.1;Parent=gene-CP553_RS00575;Dbxref=GenBank:WP_001831817.1;Name=WP_001831817.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498613.1;locus_tag=CP553_RS00575;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_001831817.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	124787	127468	.	+	.	ID=gene-CP553_RS00580;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=CP553_RS00580;old_locus_tag=CP553_00635
NZ_PCFD01000001.1	Protein Homology	CDS	124787	127468	.	+	0	ID=cds-WP_002469440.1;Parent=gene-CP553_RS00580;Dbxref=GenBank:WP_002469440.1;Name=WP_002469440.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501915.1;locus_tag=CP553_RS00580;product=DNA gyrase subunit A;protein_id=WP_002469440.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	127861	128676	.	-	.	ID=gene-CP553_RS00585;Name=CP553_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00585;old_locus_tag=CP553_00640
NZ_PCFD01000001.1	Protein Homology	CDS	127861	128676	.	-	0	ID=cds-WP_001831762.1;Parent=gene-CP553_RS00585;Dbxref=GenBank:WP_001831762.1;Name=WP_001831762.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366604.1;locus_tag=CP553_RS00585;product=NAD(P)H-hydrate dehydratase;protein_id=WP_001831762.1;transl_table=11
NZ_PCFD01000001.1	cmsearch	binding_site	129218	129433	.	+	.	ID=id-NZ_PCFD01000001.1:129218..129433;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PCFD01000001.1	RefSeq	gene	129521	130807	.	+	.	ID=gene-CP553_RS00590;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=CP553_RS00590;old_locus_tag=CP553_00645
NZ_PCFD01000001.1	Protein Homology	CDS	129521	130807	.	+	0	ID=cds-WP_002455928.1;Parent=gene-CP553_RS00590;Dbxref=GenBank:WP_002455928.1;Name=WP_002455928.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498617.1;locus_tag=CP553_RS00590;product=serine--tRNA ligase;protein_id=WP_002455928.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	131338	132321	.	-	.	ID=gene-CP553_RS00595;Name=sph;gbkey=Gene;gene=sph;gene_biotype=protein_coding;locus_tag=CP553_RS00595;old_locus_tag=CP553_00650
NZ_PCFD01000001.1	Protein Homology	CDS	131338	132321	.	-	0	ID=cds-WP_002455929.1;Parent=gene-CP553_RS00595;Dbxref=GenBank:WP_002455929.1;Name=WP_002455929.1;Ontology_term=GO:0004767;gbkey=CDS;gene=sph;go_function=sphingomyelin phosphodiesterase activity|0004767||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831803.1;locus_tag=CP553_RS00595;product=sphingomyelin phosphodiesterase;protein_id=WP_002455929.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	pseudogene	132705	133398	.	+	.	ID=gene-CP553_RS00600;Name=CP553_RS00600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS00600;old_locus_tag=CP553_00655;pseudo=true
NZ_PCFD01000001.1	Protein Homology	CDS	132705	133398	.	+	0	ID=cds-CP553_RS00600;Parent=gene-CP553_RS00600;Note=frameshifted;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498766.1;locus_tag=CP553_RS00600;product=AzlC family ABC transporter permease;pseudo=true;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	133395	133724	.	+	.	ID=gene-CP553_RS00605;Name=CP553_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00605;old_locus_tag=CP553_00660
NZ_PCFD01000001.1	Protein Homology	CDS	133395	133724	.	+	0	ID=cds-WP_002437317.1;Parent=gene-CP553_RS00605;Dbxref=GenBank:WP_002437317.1;Name=WP_002437317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496077.1;locus_tag=CP553_RS00605;product=AzlD domain-containing protein;protein_id=WP_002437317.1;transl_table=11
NZ_PCFD01000001.1	cmsearch	riboswitch	133849	133949	.	+	.	ID=id-NZ_PCFD01000001.1:133849..133949;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000001.1	RefSeq	gene	134014	134982	.	+	.	ID=gene-CP553_RS00610;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=CP553_RS00610;old_locus_tag=CP553_00665
NZ_PCFD01000001.1	Protein Homology	CDS	134014	134982	.	+	0	ID=cds-WP_002437318.1;Parent=gene-CP553_RS00610;Dbxref=GenBank:WP_002437318.1;Name=WP_002437318.1;Ontology_term=GO:0009086,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498620.1;locus_tag=CP553_RS00610;product=homoserine O-acetyltransferase MetX;protein_id=WP_002437318.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	135230	136156	.	+	.	ID=gene-CP553_RS00615;Name=CP553_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00615;old_locus_tag=CP553_00670
NZ_PCFD01000001.1	Protein Homology	CDS	135230	136156	.	+	0	ID=cds-WP_002437319.1;Parent=gene-CP553_RS00615;Dbxref=GenBank:WP_002437319.1;Name=WP_002437319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437319.1;locus_tag=CP553_RS00615;product=YybS family protein;protein_id=WP_002437319.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	136185	138152	.	+	.	ID=gene-CP553_RS00620;Name=CP553_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00620;old_locus_tag=CP553_00675
NZ_PCFD01000001.1	Protein Homology	CDS	136185	138152	.	+	0	ID=cds-WP_001832525.1;Parent=gene-CP553_RS00620;Dbxref=GenBank:WP_001832525.1;Name=WP_001832525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498622.1;locus_tag=CP553_RS00620;product=DHH family phosphoesterase;protein_id=WP_001832525.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	138149	138595	.	+	.	ID=gene-CP553_RS00625;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=CP553_RS00625;old_locus_tag=CP553_00680
NZ_PCFD01000001.1	Protein Homology	CDS	138149	138595	.	+	0	ID=cds-WP_001831811.1;Parent=gene-CP553_RS00625;Dbxref=GenBank:WP_001831811.1;Name=WP_001831811.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498623.1;locus_tag=CP553_RS00625;product=50S ribosomal protein L9;protein_id=WP_001831811.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	138766	140166	.	+	.	ID=gene-CP553_RS00630;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=CP553_RS00630;old_locus_tag=CP553_00685
NZ_PCFD01000001.1	Protein Homology	CDS	138766	140166	.	+	0	ID=cds-WP_001831779.1;Parent=gene-CP553_RS00630;Dbxref=GenBank:WP_001831779.1;Name=WP_001831779.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831779.1;locus_tag=CP553_RS00630;product=replicative DNA helicase;protein_id=WP_001831779.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	140445	141728	.	+	.	ID=gene-CP553_RS00635;Name=CP553_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00635;old_locus_tag=CP553_00690
NZ_PCFD01000001.1	Protein Homology	CDS	140445	141728	.	+	0	ID=cds-WP_002455931.1;Parent=gene-CP553_RS00635;Dbxref=GenBank:WP_002455931.1;Name=WP_002455931.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498625.1;locus_tag=CP553_RS00635;product=adenylosuccinate synthase;protein_id=WP_002455931.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	142152	142226	.	+	.	ID=gene-CP553_RS00640;Name=CP553_RS00640;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS00640;old_locus_tag=CP553_00695
NZ_PCFD01000001.1	tRNAscan-SE	tRNA	142152	142226	.	+	.	ID=rna-CP553_RS00640;Parent=gene-CP553_RS00640;anticodon=(pos:142185..142187);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS00640;product=tRNA-Glu
NZ_PCFD01000001.1	tRNAscan-SE	exon	142152	142226	.	+	.	ID=exon-CP553_RS00640-1;Parent=rna-CP553_RS00640;anticodon=(pos:142185..142187);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS00640;product=tRNA-Glu
NZ_PCFD01000001.1	RefSeq	gene	142232	142304	.	+	.	ID=gene-CP553_RS00645;Name=CP553_RS00645;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS00645;old_locus_tag=CP553_00700
NZ_PCFD01000001.1	tRNAscan-SE	tRNA	142232	142304	.	+	.	ID=rna-CP553_RS00645;Parent=gene-CP553_RS00645;anticodon=(pos:142265..142267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS00645;product=tRNA-Asp
NZ_PCFD01000001.1	tRNAscan-SE	exon	142232	142304	.	+	.	ID=exon-CP553_RS00645-1;Parent=rna-CP553_RS00645;anticodon=(pos:142265..142267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS00645;product=tRNA-Asp
NZ_PCFD01000001.1	RefSeq	gene	142781	143482	.	+	.	ID=gene-CP553_RS00650;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=CP553_RS00650;old_locus_tag=CP553_00710
NZ_PCFD01000001.1	Protein Homology	CDS	142781	143482	.	+	0	ID=cds-WP_001831816.1;Parent=gene-CP553_RS00650;Dbxref=GenBank:WP_001831816.1;Name=WP_001831816.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498626.1;locus_tag=CP553_RS00650;product=response regulator YycF;protein_id=WP_001831816.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	143495	145327	.	+	.	ID=gene-CP553_RS00655;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;gene_synonym=yycG;locus_tag=CP553_RS00655;old_locus_tag=CP553_00715
NZ_PCFD01000001.1	Protein Homology	CDS	143495	145327	.	+	0	ID=cds-WP_002437327.1;Parent=gene-CP553_RS00655;Dbxref=GenBank:WP_002437327.1;Name=WP_002437327.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=walK;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498627.1;locus_tag=CP553_RS00655;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_002437327.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	145320	146657	.	+	.	ID=gene-CP553_RS00660;Name=CP553_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00660;old_locus_tag=CP553_00720
NZ_PCFD01000001.1	Protein Homology	CDS	145320	146657	.	+	0	ID=cds-WP_001831744.1;Parent=gene-CP553_RS00660;Dbxref=GenBank:WP_001831744.1;Name=WP_001831744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447630.1;locus_tag=CP553_RS00660;product=YycH family regulatory protein;protein_id=WP_001831744.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	146658	147449	.	+	.	ID=gene-CP553_RS00665;Name=CP553_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00665;old_locus_tag=CP553_00725
NZ_PCFD01000001.1	Protein Homology	CDS	146658	147449	.	+	0	ID=cds-WP_001831750.1;Parent=gene-CP553_RS00665;Dbxref=GenBank:WP_001831750.1;Name=WP_001831750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494243.1;locus_tag=CP553_RS00665;product=two-component system regulatory protein YycI;protein_id=WP_001831750.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	148069	148869	.	+	.	ID=gene-CP553_RS00670;Name=CP553_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00670;old_locus_tag=CP553_00730
NZ_PCFD01000001.1	Protein Homology	CDS	148069	148869	.	+	0	ID=cds-WP_002447628.1;Parent=gene-CP553_RS00670;Dbxref=GenBank:WP_002447628.1;Name=WP_002447628.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498630.1;locus_tag=CP553_RS00670;product=MBL fold metallo-hydrolase;protein_id=WP_002447628.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	149911	150390	.	+	.	ID=gene-CP553_RS00675;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=CP553_RS00675;old_locus_tag=CP553_00735
NZ_PCFD01000001.1	Protein Homology	CDS	149911	150390	.	+	0	ID=cds-WP_002458513.1;Parent=gene-CP553_RS00675;Dbxref=GenBank:WP_002458513.1;Name=WP_002458513.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363758.1;locus_tag=CP553_RS00675;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_002458513.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	150749	151423	.	-	.	ID=gene-CP553_RS00680;Name=CP553_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00680;old_locus_tag=CP553_00740
NZ_PCFD01000001.1	Protein Homology	CDS	150749	151423	.	-	0	ID=cds-WP_001105987.1;Parent=gene-CP553_RS00680;Dbxref=GenBank:WP_001105987.1;Name=WP_001105987.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS00680;product=IS6-like element IS257 family transposase;protein_id=WP_001105987.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	151459	151848	.	+	.	ID=gene-CP553_RS00685;Name=CP553_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00685;old_locus_tag=CP553_00745
NZ_PCFD01000001.1	Protein Homology	CDS	151459	151848	.	+	0	ID=cds-WP_020444595.1;Parent=gene-CP553_RS00685;Dbxref=GenBank:WP_020444595.1;Name=WP_020444595.1;Ontology_term=GO:0006084,GO:0010142,GO:0004421;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA synthase activity|0004421||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,farnesyl diphosphate biosynthetic process%2C mevalonate pathway|0010142||IEA;inference=COORDINATES: protein motif:HMM:NF020129.6;locus_tag=CP553_RS00685;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_020444595.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	152725	153468	.	+	.	ID=gene-CP553_RS00690;Name=CP553_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00690;old_locus_tag=CP553_00755
NZ_PCFD01000001.1	Protein Homology	CDS	152725	153468	.	+	0	ID=cds-WP_116842973.1;Parent=gene-CP553_RS00690;Dbxref=GenBank:WP_116842973.1;Name=WP_116842973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830227.1;locus_tag=CP553_RS00690;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_116842973.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	153565	153993	.	+	.	ID=gene-CP553_RS00695;Name=CP553_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00695;old_locus_tag=CP553_00760
NZ_PCFD01000001.1	Protein Homology	CDS	153565	153993	.	+	0	ID=cds-WP_000872606.1;Parent=gene-CP553_RS00695;Dbxref=GenBank:WP_000872606.1;Name=WP_000872606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000872606.1;locus_tag=CP553_RS00695;product=MaoC family dehydratase;protein_id=WP_000872606.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	154039	156048	.	-	.	ID=gene-CP553_RS00700;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=CP553_RS00700;old_locus_tag=CP553_00765
NZ_PCFD01000001.1	Protein Homology	CDS	154039	156048	.	-	0	ID=cds-WP_001801873.1;Parent=gene-CP553_RS00700;Dbxref=GenBank:WP_001801873.1;Name=WP_001801873.1;Ontology_term=GO:0046677,GO:0008658;gbkey=CDS;gene=mecA;go_function=penicillin binding|0008658||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001801873.1;locus_tag=CP553_RS00700;product=PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA;protein_id=WP_001801873.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	156145	157131	.	+	.	ID=gene-CP553_RS00705;Name=CP553_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00705;old_locus_tag=CP553_00770
NZ_PCFD01000001.1	Protein Homology	CDS	156145	157131	.	+	0	ID=cds-WP_001549960.1;Parent=gene-CP553_RS00705;Dbxref=GenBank:WP_001549960.1;Name=WP_001549960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549960.1;locus_tag=CP553_RS00705;product=beta-lactam sensor/signal transducer MecR1;protein_id=WP_001549960.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	pseudogene	157121	157363	.	+	.	ID=gene-CP553_RS00710;Name=CP553_RS00710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS00710;old_locus_tag=CP553_00775;partial=true;pseudo=true;start_range=.,157121
NZ_PCFD01000001.1	Protein Homology	CDS	157121	157363	.	+	0	ID=cds-CP553_RS00710;Parent=gene-CP553_RS00710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505894.1;locus_tag=CP553_RS00710;partial=true;product=type I restriction enzyme endonuclease domain-containing protein;pseudo=true;start_range=.,157121;transl_table=11
NZ_PCFD01000001.1	RefSeq	pseudogene	157354	158964	.	-	.	ID=gene-CP553_RS00715;Name=CP553_RS00715;end_range=158964,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS00715;old_locus_tag=CP553_00780;partial=true;pseudo=true
NZ_PCFD01000001.1	Protein Homology	CDS	157354	158964	.	-	0	ID=cds-CP553_RS00715;Parent=gene-CP553_RS00715;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=158964,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274780.1;locus_tag=CP553_RS00715;partial=true;product=IS1182 family transposase;pseudo=true;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	159013	159519	.	-	.	ID=gene-CP553_RS00720;Name=CP553_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00720;old_locus_tag=CP553_00785
NZ_PCFD01000001.1	Protein Homology	CDS	159013	159519	.	-	0	ID=cds-WP_001092189.1;Parent=gene-CP553_RS00720;Dbxref=GenBank:WP_001092189.1;Name=WP_001092189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001092170.1;locus_tag=CP553_RS00720;product=DUF1643 domain-containing protein;protein_id=WP_001092189.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	159534	159845	.	-	.	ID=gene-CP553_RS00725;Name=CP553_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00725;old_locus_tag=CP553_00790
NZ_PCFD01000001.1	Protein Homology	CDS	159534	159845	.	-	0	ID=cds-WP_000700851.1;Parent=gene-CP553_RS00725;Dbxref=GenBank:WP_000700851.1;Name=WP_000700851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505017.1;locus_tag=CP553_RS00725;product=DUF960 family protein;protein_id=WP_000700851.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	159932	160282	.	-	.	ID=gene-CP553_RS00730;Name=CP553_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00730;old_locus_tag=CP553_00800
NZ_PCFD01000001.1	Protein Homology	CDS	159932	160282	.	-	0	ID=cds-WP_000849672.1;Parent=gene-CP553_RS00730;Dbxref=GenBank:WP_000849672.1;Name=WP_000849672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502216.1;locus_tag=CP553_RS00730;product=SAUGI family uracil-DNA glycosylase inhibitor;protein_id=WP_000849672.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	160804	162432	.	-	.	ID=gene-CP553_RS00735;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=CP553_RS00735;old_locus_tag=CP553_00805
NZ_PCFD01000001.1	Protein Homology	CDS	160804	162432	.	-	0	ID=cds-WP_001186604.1;Parent=gene-CP553_RS00735;Dbxref=GenBank:WP_001186604.1;Name=WP_001186604.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=ccrB;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186610.1;locus_tag=CP553_RS00735;product=cassette chromosome recombinase CcrB;protein_id=WP_001186604.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	162454	163803	.	-	.	ID=gene-CP553_RS00740;Name=ccrA;gbkey=Gene;gene=ccrA;gene_biotype=protein_coding;locus_tag=CP553_RS00740;old_locus_tag=CP553_00810
NZ_PCFD01000001.1	Protein Homology	CDS	162454	163803	.	-	0	ID=cds-WP_000815652.1;Parent=gene-CP553_RS00740;Dbxref=GenBank:WP_000815652.1;Name=WP_000815652.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=ccrA;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815654.1;locus_tag=CP553_RS00740;product=cassette chromosome recombinase CcrA;protein_id=WP_000815652.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	164037	165824	.	-	.	ID=gene-CP553_RS00745;Name=cch1;gbkey=Gene;gene=cch1;gene_biotype=protein_coding;locus_tag=CP553_RS00745;old_locus_tag=CP553_00815
NZ_PCFD01000001.1	Protein Homology	CDS	164037	165824	.	-	0	ID=cds-WP_116842974.1;Parent=gene-CP553_RS00745;Dbxref=GenBank:WP_116842974.1;Name=WP_116842974.1;Ontology_term=GO:0043138;gbkey=CDS;gene=cch1;go_function=3'-5' DNA helicase activity|0043138||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001573627.1;locus_tag=CP553_RS00745;product=cassette chromosome replicative helicase;protein_id=WP_116842974.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	165824	166114	.	-	.	ID=gene-CP553_RS00750;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=CP553_RS00750;old_locus_tag=CP553_00820
NZ_PCFD01000001.1	Protein Homology	CDS	165824	166114	.	-	0	ID=cds-WP_001036437.1;Parent=gene-CP553_RS00750;Dbxref=GenBank:WP_001036437.1;Name=WP_001036437.1;gbkey=CDS;gene=ssb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001036438.1;locus_tag=CP553_RS00750;product=cassette chromosome ssDNA-binding protein;protein_id=WP_001036437.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	166253	167302	.	+	.	ID=gene-CP553_RS00755;Name=CP553_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00755;old_locus_tag=CP553_00825
NZ_PCFD01000001.1	Protein Homology	CDS	166253	167302	.	+	0	ID=cds-WP_000613248.1;Parent=gene-CP553_RS00755;Dbxref=GenBank:WP_000613248.1;Name=WP_000613248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000613248.1;locus_tag=CP553_RS00755;product=hypothetical protein;protein_id=WP_000613248.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	167865	169355	.	+	.	ID=gene-CP553_RS00760;Name=CP553_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00760;old_locus_tag=CP553_00830
NZ_PCFD01000001.1	Protein Homology	CDS	167865	169355	.	+	0	ID=cds-WP_000554504.1;Parent=gene-CP553_RS00760;Dbxref=GenBank:WP_000554504.1;Name=WP_000554504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000554504.1;locus_tag=CP553_RS00760;product=RNA-binding domain-containing protein;protein_id=WP_000554504.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	pseudogene	169728	171046	.	-	.	ID=gene-CP553_RS00765;Name=cstB;gbkey=Gene;gene=cstB;gene_biotype=pseudogene;locus_tag=CP553_RS00765;old_locus_tag=CP553_00835;pseudo=true
NZ_PCFD01000001.1	Protein Homology	CDS	169728	171046	.	-	0	ID=cds-CP553_RS00765;Parent=gene-CP553_RS00765;Note=frameshifted;gbkey=CDS;gene=cstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487247.1;locus_tag=CP553_RS00765;product=persulfide dioxygenase-sulfurtransferase CstB;pseudo=true;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	171102	171239	.	+	.	ID=gene-CP553_RS00770;Name=CP553_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00770
NZ_PCFD01000001.1	Protein Homology	CDS	171102	171239	.	+	0	ID=cds-WP_001791883.1;Parent=gene-CP553_RS00770;Dbxref=GenBank:WP_001791883.1;Name=WP_001791883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001791883.1;locus_tag=CP553_RS00770;product=hypothetical protein;protein_id=WP_001791883.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	171236	171607	.	+	.	ID=gene-CP553_RS00775;Name=CP553_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00775;old_locus_tag=CP553_00840
NZ_PCFD01000001.1	Protein Homology	CDS	171236	171607	.	+	0	ID=cds-WP_001549968.1;Parent=gene-CP553_RS00775;Dbxref=GenBank:WP_001549968.1;Name=WP_001549968.1;Ontology_term=GO:0003677,GO:0004519,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549968.1;locus_tag=CP553_RS00775;product=HNH endonuclease;protein_id=WP_001549968.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	171736	172356	.	+	.	ID=gene-CP553_RS00780;Name=CP553_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00780;old_locus_tag=CP553_00845
NZ_PCFD01000001.1	Protein Homology	CDS	171736	172356	.	+	0	ID=cds-WP_000673114.1;Parent=gene-CP553_RS00780;Dbxref=GenBank:WP_000673114.1;Name=WP_000673114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000673114.1;locus_tag=CP553_RS00780;product=hypothetical protein;protein_id=WP_000673114.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	172780	172923	.	+	.	ID=gene-CP553_RS00785;Name=CP553_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00785;old_locus_tag=CP553_00850
NZ_PCFD01000001.1	GeneMarkS-2+	CDS	172780	172923	.	+	0	ID=cds-WP_001631028.1;Parent=gene-CP553_RS00785;Dbxref=GenBank:WP_001631028.1;Name=WP_001631028.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS00785;product=restriction endonuclease subunit R;protein_id=WP_001631028.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	172916	174118	.	+	.	ID=gene-CP553_RS00790;Name=CP553_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00790;old_locus_tag=CP553_00855
NZ_PCFD01000001.1	Protein Homology	CDS	172916	174118	.	+	0	ID=cds-WP_001631029.1;Parent=gene-CP553_RS00790;Dbxref=GenBank:WP_001631029.1;Name=WP_001631029.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001631029.1;locus_tag=CP553_RS00790;product=restriction endonuclease subunit S;protein_id=WP_001631029.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	pseudogene	174122	174382	.	-	.	ID=gene-CP553_RS00795;Name=CP553_RS00795;end_range=174382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS00795;old_locus_tag=CP553_00860;partial=true;pseudo=true
NZ_PCFD01000001.1	Protein Homology	CDS	174122	174382	.	-	0	ID=cds-CP553_RS00795;Parent=gene-CP553_RS00795;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=174382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365407.1;locus_tag=CP553_RS00795;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	174441	174938	.	-	.	ID=gene-CP553_RS00800;Name=CP553_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00800;old_locus_tag=CP553_00865
NZ_PCFD01000001.1	Protein Homology	CDS	174441	174938	.	-	0	ID=cds-WP_001631030.1;Parent=gene-CP553_RS00800;Dbxref=GenBank:WP_001631030.1;Name=WP_001631030.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656763.1;locus_tag=CP553_RS00800;product=GNAT family N-acetyltransferase;protein_id=WP_001631030.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	175610	176020	.	-	.	ID=gene-CP553_RS00810;Name=CP553_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00810;old_locus_tag=CP553_00875
NZ_PCFD01000001.1	Protein Homology	CDS	175610	176020	.	-	0	ID=cds-WP_001631031.1;Parent=gene-CP553_RS00810;Dbxref=GenBank:WP_001631031.1;Name=WP_001631031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001631031.1;locus_tag=CP553_RS00810;product=DUF2871 domain-containing protein;protein_id=WP_001631031.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	pseudogene	176183	176403	.	-	.	ID=gene-CP553_RS00815;Name=CP553_RS00815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS00815;old_locus_tag=CP553_00880;pseudo=true
NZ_PCFD01000001.1	Protein Homology	CDS	176183	176403	.	-	0	ID=cds-CP553_RS00815;Parent=gene-CP553_RS00815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832432.1;locus_tag=CP553_RS00815;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	176418	176921	.	-	.	ID=gene-CP553_RS00820;Name=CP553_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00820;old_locus_tag=CP553_00885
NZ_PCFD01000001.1	Protein Homology	CDS	176418	176921	.	-	0	ID=cds-WP_001631032.1;Parent=gene-CP553_RS00820;Dbxref=GenBank:WP_001631032.1;Name=WP_001631032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012086592.1;locus_tag=CP553_RS00820;product=DUF1643 domain-containing protein;protein_id=WP_001631032.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	176937	177248	.	-	.	ID=gene-CP553_RS00825;Name=CP553_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00825;old_locus_tag=CP553_00890
NZ_PCFD01000001.1	Protein Homology	CDS	176937	177248	.	-	0	ID=cds-WP_001631033.1;Parent=gene-CP553_RS00825;Dbxref=GenBank:WP_001631033.1;Name=WP_001631033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505017.1;locus_tag=CP553_RS00825;product=DUF960 domain-containing protein;protein_id=WP_001631033.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	177335	177685	.	-	.	ID=gene-CP553_RS00830;Name=CP553_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00830;old_locus_tag=CP553_00895
NZ_PCFD01000001.1	Protein Homology	CDS	177335	177685	.	-	0	ID=cds-WP_001631034.1;Parent=gene-CP553_RS00830;Dbxref=GenBank:WP_001631034.1;Name=WP_001631034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502216.1;locus_tag=CP553_RS00830;product=SAUGI family uracil-DNA glycosylase inhibitor;protein_id=WP_001631034.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	178186	179814	.	-	.	ID=gene-CP553_RS00835;Name=ccrB;gbkey=Gene;gene=ccrB;gene_biotype=protein_coding;locus_tag=CP553_RS00835;old_locus_tag=CP553_00900
NZ_PCFD01000001.1	Protein Homology	CDS	178186	179814	.	-	0	ID=cds-WP_001631035.1;Parent=gene-CP553_RS00835;Dbxref=GenBank:WP_001631035.1;Name=WP_001631035.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=ccrB;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485718.1;locus_tag=CP553_RS00835;product=cassette chromosome recombinase CcrB;protein_id=WP_001631035.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	179811	181172	.	-	.	ID=gene-CP553_RS00840;Name=ccrA;gbkey=Gene;gene=ccrA;gene_biotype=protein_coding;locus_tag=CP553_RS00840;old_locus_tag=CP553_00905
NZ_PCFD01000001.1	Protein Homology	CDS	179811	181172	.	-	0	ID=cds-WP_001631036.1;Parent=gene-CP553_RS00840;Dbxref=GenBank:WP_001631036.1;Name=WP_001631036.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=ccrA;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501909.1;locus_tag=CP553_RS00840;product=cassette chromosome recombinase CcrA;protein_id=WP_001631036.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	pseudogene	181359	181988	.	-	.	ID=gene-CP553_RS00845;Name=CP553_RS00845;end_range=181988,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS00845;old_locus_tag=CP553_00910;partial=true;pseudo=true
NZ_PCFD01000001.1	Protein Homology	CDS	181359	181988	.	-	0	ID=cds-CP553_RS00845;Parent=gene-CP553_RS00845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=181988,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176075.1;locus_tag=CP553_RS00845;partial=true;product=cassette chromosome replicative helicase;pseudo=true;transl_table=11
NZ_PCFD01000001.1	RefSeq	pseudogene	181997	182335	.	+	.	ID=gene-CP553_RS00850;Name=CP553_RS00850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS00850;old_locus_tag=CP553_00915;partial=true;pseudo=true;start_range=.,181997
NZ_PCFD01000001.1	Protein Homology	CDS	181997	182335	.	+	0	ID=cds-CP553_RS00850;Parent=gene-CP553_RS00850;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815654.1;locus_tag=CP553_RS00850;partial=true;product=cassette chromosome recombinase CcrA;pseudo=true;start_range=.,181997;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	182447	182806	.	-	.	ID=gene-CP553_RS00855;Name=CP553_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00855;old_locus_tag=CP553_00920
NZ_PCFD01000001.1	Protein Homology	CDS	182447	182806	.	-	0	ID=cds-WP_001631039.1;Parent=gene-CP553_RS00855;Dbxref=GenBank:WP_001631039.1;Name=WP_001631039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175149.1;locus_tag=CP553_RS00855;product=hypothetical protein;protein_id=WP_001631039.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	183013	183339	.	+	.	ID=gene-CP553_RS00860;Name=CP553_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00860;old_locus_tag=CP553_00925
NZ_PCFD01000001.1	Protein Homology	CDS	183013	183339	.	+	0	ID=cds-WP_000391495.1;Parent=gene-CP553_RS00860;Dbxref=GenBank:WP_000391495.1;Name=WP_000391495.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391495.1;locus_tag=CP553_RS00860;product=ArsR/SmtB family transcription factor;protein_id=WP_000391495.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	183669	185594	.	+	.	ID=gene-CP553_RS00865;Name=CP553_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00865;old_locus_tag=CP553_00935
NZ_PCFD01000001.1	Protein Homology	CDS	183669	185594	.	+	0	ID=cds-WP_002485723.1;Parent=gene-CP553_RS00865;Dbxref=GenBank:WP_002485723.1;Name=WP_002485723.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175150.1;locus_tag=CP553_RS00865;product=heavy metal translocating P-type ATPase;protein_id=WP_002485723.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	186689	187318	.	+	.	ID=gene-CP553_RS00870;Name=CP553_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00870;old_locus_tag=CP553_00940
NZ_PCFD01000001.1	Protein Homology	CDS	186689	187318	.	+	0	ID=cds-WP_001053439.1;Parent=gene-CP553_RS00870;Dbxref=GenBank:WP_001053439.1;Name=WP_001053439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494594.1;locus_tag=CP553_RS00870;product=hypothetical protein;protein_id=WP_001053439.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	187333	187575	.	+	.	ID=gene-CP553_RS00875;Name=CP553_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00875;old_locus_tag=CP553_00945
NZ_PCFD01000001.1	Protein Homology	CDS	187333	187575	.	+	0	ID=cds-WP_000931963.1;Parent=gene-CP553_RS00875;Dbxref=GenBank:WP_000931963.1;Name=WP_000931963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000931963.1;locus_tag=CP553_RS00875;product=hypothetical protein;protein_id=WP_000931963.1;transl_table=11
NZ_PCFD01000001.1	RefSeq	gene	187974	188385	.	+	.	ID=gene-CP553_RS00880;Name=CP553_RS00880;end_range=188385,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00880;old_locus_tag=CP553_00950;partial=true
NZ_PCFD01000001.1	Protein Homology	CDS	187974	188385	.	+	0	ID=cds-WP_142255084.1;Parent=gene-CP553_RS00880;Dbxref=GenBank:WP_142255084.1;Name=WP_142255084.1;end_range=188385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558285.1;locus_tag=CP553_RS00880;partial=true;product=IS3 family transposase;protein_id=WP_142255084.1;transl_table=11
##sequence-region NZ_PCFD01000002.1 1 146136
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000002.1	RefSeq	region	1	146136	.	+	.	ID=NZ_PCFD01000002.1:1..146136;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000002.1	RefSeq	gene	211	1008	.	+	.	ID=gene-CP553_RS00885;Name=CP553_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00885;old_locus_tag=CP553_00955
NZ_PCFD01000002.1	Protein Homology	CDS	211	1008	.	+	0	ID=cds-WP_001830106.1;Parent=gene-CP553_RS00885;Dbxref=GenBank:WP_001830106.1;Name=WP_001830106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830106.1;locus_tag=CP553_RS00885;product=VOC family protein;protein_id=WP_001830106.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	1013	1483	.	+	.	ID=gene-CP553_RS00890;Name=CP553_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00890;old_locus_tag=CP553_00960
NZ_PCFD01000002.1	Protein Homology	CDS	1013	1483	.	+	0	ID=cds-WP_002439429.1;Parent=gene-CP553_RS00890;Dbxref=GenBank:WP_002439429.1;Name=WP_002439429.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470266.1;locus_tag=CP553_RS00890;product=CHAP domain-containing protein;protein_id=WP_002439429.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	1572	2057	.	+	.	ID=gene-CP553_RS00895;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=CP553_RS00895;old_locus_tag=CP553_00965
NZ_PCFD01000002.1	Protein Homology	CDS	1572	2057	.	+	0	ID=cds-WP_002494430.1;Parent=gene-CP553_RS00895;Dbxref=GenBank:WP_002494430.1;Name=WP_002494430.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498388.1;locus_tag=CP553_RS00895;product=signal peptidase II;protein_id=WP_002494430.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	2060	2977	.	+	.	ID=gene-CP553_RS00900;Name=CP553_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00900;old_locus_tag=CP553_00970
NZ_PCFD01000002.1	Protein Homology	CDS	2060	2977	.	+	0	ID=cds-WP_001830176.1;Parent=gene-CP553_RS00900;Dbxref=GenBank:WP_001830176.1;Name=WP_001830176.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499703.1;locus_tag=CP553_RS00900;product=RluA family pseudouridine synthase;protein_id=WP_001830176.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	3280	3807	.	+	.	ID=gene-CP553_RS00905;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=CP553_RS00905;old_locus_tag=CP553_00975
NZ_PCFD01000002.1	Protein Homology	CDS	3280	3807	.	+	0	ID=cds-WP_001830167.1;Parent=gene-CP553_RS00905;Dbxref=GenBank:WP_001830167.1;Name=WP_001830167.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499704.1;locus_tag=CP553_RS00905;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_001830167.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	4040	5347	.	+	.	ID=gene-CP553_RS00910;Name=CP553_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00910;old_locus_tag=CP553_00980
NZ_PCFD01000002.1	Protein Homology	CDS	4040	5347	.	+	0	ID=cds-WP_001830174.1;Parent=gene-CP553_RS00910;Dbxref=GenBank:WP_001830174.1;Name=WP_001830174.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499705.1;locus_tag=CP553_RS00910;product=uracil-xanthine permease family protein;protein_id=WP_001830174.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	5373	6254	.	+	.	ID=gene-CP553_RS00915;Name=CP553_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00915;old_locus_tag=CP553_00985
NZ_PCFD01000002.1	Protein Homology	CDS	5373	6254	.	+	0	ID=cds-WP_001830068.1;Parent=gene-CP553_RS00915;Dbxref=GenBank:WP_001830068.1;Name=WP_001830068.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499706.1;locus_tag=CP553_RS00915;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_001830068.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	6272	7549	.	+	.	ID=gene-CP553_RS00920;Name=CP553_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00920;old_locus_tag=CP553_00990
NZ_PCFD01000002.1	Protein Homology	CDS	6272	7549	.	+	0	ID=cds-WP_001830129.1;Parent=gene-CP553_RS00920;Dbxref=GenBank:WP_001830129.1;Name=WP_001830129.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499707.1;locus_tag=CP553_RS00920;product=dihydroorotase;protein_id=WP_001830129.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	7550	8650	.	+	.	ID=gene-CP553_RS00925;Name=CP553_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00925;old_locus_tag=CP553_00995
NZ_PCFD01000002.1	Protein Homology	CDS	7550	8650	.	+	0	ID=cds-WP_002439438.1;Parent=gene-CP553_RS00925;Dbxref=GenBank:WP_002439438.1;Name=WP_002439438.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499708.1;locus_tag=CP553_RS00925;product=carbamoyl phosphate synthase small subunit;protein_id=WP_002439438.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	8643	11816	.	+	.	ID=gene-CP553_RS00930;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CP553_RS00930;old_locus_tag=CP553_01000
NZ_PCFD01000002.1	Protein Homology	CDS	8643	11816	.	+	0	ID=cds-WP_002439440.1;Parent=gene-CP553_RS00930;Dbxref=GenBank:WP_002439440.1;Name=WP_002439440.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499709.1;locus_tag=CP553_RS00930;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_002439440.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	11851	12543	.	+	.	ID=gene-CP553_RS00935;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=CP553_RS00935;old_locus_tag=CP553_01005
NZ_PCFD01000002.1	Protein Homology	CDS	11851	12543	.	+	0	ID=cds-WP_002456229.1;Parent=gene-CP553_RS00935;Dbxref=GenBank:WP_002456229.1;Name=WP_002456229.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457397.1;locus_tag=CP553_RS00935;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_002456229.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	12544	13155	.	+	.	ID=gene-CP553_RS00940;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=CP553_RS00940;old_locus_tag=CP553_01010
NZ_PCFD01000002.1	Protein Homology	CDS	12544	13155	.	+	0	ID=cds-WP_001830179.1;Parent=gene-CP553_RS00940;Dbxref=GenBank:WP_001830179.1;Name=WP_001830179.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499711.1;locus_tag=CP553_RS00940;product=orotate phosphoribosyltransferase;protein_id=WP_001830179.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	13181	13351	.	+	.	ID=gene-CP553_RS00945;Name=CP553_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00945;old_locus_tag=CP553_01015
NZ_PCFD01000002.1	Protein Homology	CDS	13181	13351	.	+	0	ID=cds-WP_165798622.1;Parent=gene-CP553_RS00945;Dbxref=GenBank:WP_165798622.1;Name=WP_165798622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830061.1;locus_tag=CP553_RS00945;product=hypothetical protein;protein_id=WP_165798622.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	13924	14331	.	+	.	ID=gene-CP553_RS00950;Name=CP553_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00950;old_locus_tag=CP553_01020
NZ_PCFD01000002.1	Protein Homology	CDS	13924	14331	.	+	0	ID=cds-WP_001830181.1;Parent=gene-CP553_RS00950;Dbxref=GenBank:WP_001830181.1;Name=WP_001830181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464312.1;locus_tag=CP553_RS00950;product=VOC family protein;protein_id=WP_001830181.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	14393	16090	.	-	.	ID=gene-CP553_RS00955;Name=CP553_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00955;old_locus_tag=CP553_01025
NZ_PCFD01000002.1	Protein Homology	CDS	14393	16090	.	-	0	ID=cds-WP_002439447.1;Parent=gene-CP553_RS00955;Dbxref=GenBank:WP_002439447.1;Name=WP_002439447.1;Ontology_term=GO:0072344,GO:0001968,GO:1990112;gbkey=CDS;go_component=RQC complex|1990112||IEA;go_function=fibronectin binding|0001968||IEA;go_process=rescue of stalled ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499714.1;locus_tag=CP553_RS00955;product=Rqc2 family fibronectin-binding protein;protein_id=WP_002439447.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	16360	16983	.	+	.	ID=gene-CP553_RS00960;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=CP553_RS00960;old_locus_tag=CP553_01030
NZ_PCFD01000002.1	Protein Homology	CDS	16360	16983	.	+	0	ID=cds-WP_001830096.1;Parent=gene-CP553_RS00960;Dbxref=GenBank:WP_001830096.1;Name=WP_001830096.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499715.1;locus_tag=CP553_RS00960;product=guanylate kinase;protein_id=WP_001830096.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	16983	17195	.	+	.	ID=gene-CP553_RS00965;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=CP553_RS00965;old_locus_tag=CP553_01035
NZ_PCFD01000002.1	Protein Homology	CDS	16983	17195	.	+	0	ID=cds-WP_002439449.1;Parent=gene-CP553_RS00965;Dbxref=GenBank:WP_002439449.1;Name=WP_002439449.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486612.1;locus_tag=CP553_RS00965;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_002439449.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	17733	18932	.	+	.	ID=gene-CP553_RS00970;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=CP553_RS00970;old_locus_tag=CP553_01040
NZ_PCFD01000002.1	Protein Homology	CDS	17733	18932	.	+	0	ID=cds-WP_001830125.1;Parent=gene-CP553_RS00970;Dbxref=GenBank:WP_001830125.1;Name=WP_001830125.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499717.1;locus_tag=CP553_RS00970;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_001830125.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	18932	21340	.	+	.	ID=gene-CP553_RS00975;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=CP553_RS00975;old_locus_tag=CP553_01045
NZ_PCFD01000002.1	Protein Homology	CDS	18932	21340	.	+	0	ID=cds-WP_002439451.1;Parent=gene-CP553_RS00975;Dbxref=GenBank:WP_002439451.1;Name=WP_002439451.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499718.1;locus_tag=CP553_RS00975;product=primosomal protein N';protein_id=WP_002439451.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	21448	21651	.	-	.	ID=gene-CP553_RS00980;Name=CP553_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00980;old_locus_tag=CP553_01050
NZ_PCFD01000002.1	Protein Homology	CDS	21448	21651	.	-	0	ID=cds-WP_001830141.1;Parent=gene-CP553_RS00980;Dbxref=GenBank:WP_001830141.1;Name=WP_001830141.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830141.1;locus_tag=CP553_RS00980;product=TM2 domain-containing protein;protein_id=WP_001830141.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	21873	22361	.	+	.	ID=gene-CP553_RS00985;Name=CP553_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS00985;old_locus_tag=CP553_01055
NZ_PCFD01000002.1	Protein Homology	CDS	21873	22361	.	+	0	ID=cds-WP_001830064.1;Parent=gene-CP553_RS00985;Dbxref=GenBank:WP_001830064.1;Name=WP_001830064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446255.1;locus_tag=CP553_RS00985;product=peptide deformylase;protein_id=WP_001830064.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	22354	23286	.	+	.	ID=gene-CP553_RS00990;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=CP553_RS00990;old_locus_tag=CP553_01060
NZ_PCFD01000002.1	Protein Homology	CDS	22354	23286	.	+	0	ID=cds-WP_002439455.1;Parent=gene-CP553_RS00990;Dbxref=GenBank:WP_002439455.1;Name=WP_002439455.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363823.1;locus_tag=CP553_RS00990;product=methionyl-tRNA formyltransferase;protein_id=WP_002439455.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	23283	24590	.	+	.	ID=gene-CP553_RS00995;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=CP553_RS00995;old_locus_tag=CP553_01065
NZ_PCFD01000002.1	Protein Homology	CDS	23283	24590	.	+	0	ID=cds-WP_002439457.1;Parent=gene-CP553_RS00995;Dbxref=GenBank:WP_002439457.1;Name=WP_002439457.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439457.1;locus_tag=CP553_RS00995;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_002439457.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	24593	25687	.	+	.	ID=gene-CP553_RS01000;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=CP553_RS01000;old_locus_tag=CP553_01070
NZ_PCFD01000002.1	Protein Homology	CDS	24593	25687	.	+	0	ID=cds-WP_001830070.1;Parent=gene-CP553_RS01000;Dbxref=GenBank:WP_001830070.1;Name=WP_001830070.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435140.1;locus_tag=CP553_RS01000;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_001830070.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	25694	26437	.	+	.	ID=gene-CP553_RS01005;Name=CP553_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01005;old_locus_tag=CP553_01075
NZ_PCFD01000002.1	Protein Homology	CDS	25694	26437	.	+	0	ID=cds-WP_002439460.1;Parent=gene-CP553_RS01005;Dbxref=GenBank:WP_002439460.1;Name=WP_002439460.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499725.1;locus_tag=CP553_RS01005;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_002439460.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	26434	28437	.	+	.	ID=gene-CP553_RS01010;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=CP553_RS01010;old_locus_tag=CP553_01080
NZ_PCFD01000002.1	Protein Homology	CDS	26434	28437	.	+	0	ID=cds-WP_002439462.1;Parent=gene-CP553_RS01010;Dbxref=GenBank:WP_002439462.1;Name=WP_002439462.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503415.1;locus_tag=CP553_RS01010;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_002439462.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	28745	29620	.	+	.	ID=gene-CP553_RS01015;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=CP553_RS01015;old_locus_tag=CP553_01085
NZ_PCFD01000002.1	Protein Homology	CDS	28745	29620	.	+	0	ID=cds-WP_002456227.1;Parent=gene-CP553_RS01015;Dbxref=GenBank:WP_002456227.1;Name=WP_002456227.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363819.1;locus_tag=CP553_RS01015;product=ribosome small subunit-dependent GTPase A;protein_id=WP_002456227.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	29621	30265	.	+	.	ID=gene-CP553_RS01020;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=CP553_RS01020;old_locus_tag=CP553_01090
NZ_PCFD01000002.1	Protein Homology	CDS	29621	30265	.	+	0	ID=cds-WP_001830173.1;Parent=gene-CP553_RS01020;Dbxref=GenBank:WP_001830173.1;Name=WP_001830173.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473242.1;locus_tag=CP553_RS01020;product=ribulose-phosphate 3-epimerase;protein_id=WP_001830173.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	30270	30905	.	+	.	ID=gene-CP553_RS01025;Name=CP553_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01025;old_locus_tag=CP553_01095
NZ_PCFD01000002.1	Protein Homology	CDS	30270	30905	.	+	0	ID=cds-WP_001830164.1;Parent=gene-CP553_RS01025;Dbxref=GenBank:WP_001830164.1;Name=WP_001830164.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830164.1;locus_tag=CP553_RS01025;product=thiamine diphosphokinase;protein_id=WP_001830164.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	30988	31176	.	-	.	ID=gene-CP553_RS01030;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=CP553_RS01030;old_locus_tag=CP553_01100
NZ_PCFD01000002.1	Protein Homology	CDS	30988	31176	.	-	0	ID=cds-WP_001830107.1;Parent=gene-CP553_RS01030;Dbxref=GenBank:WP_001830107.1;Name=WP_001830107.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1;locus_tag=CP553_RS01030;product=50S ribosomal protein L28;protein_id=WP_001830107.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	31534	31908	.	+	.	ID=gene-CP553_RS01035;Name=CP553_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01035;old_locus_tag=CP553_01105
NZ_PCFD01000002.1	Protein Homology	CDS	31534	31908	.	+	0	ID=cds-WP_001830156.1;Parent=gene-CP553_RS01035;Dbxref=GenBank:WP_001830156.1;Name=WP_001830156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494961.1;locus_tag=CP553_RS01035;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_001830156.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	31923	33581	.	+	.	ID=gene-CP553_RS01040;Name=fakA;gbkey=Gene;gene=fakA;gene_biotype=protein_coding;locus_tag=CP553_RS01040;old_locus_tag=CP553_01110
NZ_PCFD01000002.1	Protein Homology	CDS	31923	33581	.	+	0	ID=cds-WP_001830116.1;Parent=gene-CP553_RS01040;Dbxref=GenBank:WP_001830116.1;Name=WP_001830116.1;gbkey=CDS;gene=fakA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499732.1;locus_tag=CP553_RS01040;product=fatty acid kinase catalytic subunit FakA;protein_id=WP_001830116.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	33785	35833	.	+	.	ID=gene-CP553_RS01045;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=CP553_RS01045;old_locus_tag=CP553_01115
NZ_PCFD01000002.1	Protein Homology	CDS	33785	35833	.	+	0	ID=cds-WP_001830069.1;Parent=gene-CP553_RS01045;Dbxref=GenBank:WP_001830069.1;Name=WP_001830069.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499733.1;locus_tag=CP553_RS01045;product=ATP-dependent DNA helicase RecG;protein_id=WP_001830069.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	35992	36552	.	+	.	ID=gene-CP553_RS01050;Name=fapR;gbkey=Gene;gene=fapR;gene_biotype=protein_coding;locus_tag=CP553_RS01050;old_locus_tag=CP553_01120
NZ_PCFD01000002.1	Protein Homology	CDS	35992	36552	.	+	0	ID=cds-WP_001830099.1;Parent=gene-CP553_RS01050;Dbxref=GenBank:WP_001830099.1;Name=WP_001830099.1;Ontology_term=GO:0045717,GO:0045892,GO:0003700;gbkey=CDS;gene=fapR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of fatty acid biosynthetic process|0045717||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830099.1;locus_tag=CP553_RS01050;product=transcription factor FapR;protein_id=WP_001830099.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	36554	37531	.	+	.	ID=gene-CP553_RS01055;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=CP553_RS01055;old_locus_tag=CP553_01125
NZ_PCFD01000002.1	Protein Homology	CDS	36554	37531	.	+	0	ID=cds-WP_001830112.1;Parent=gene-CP553_RS01055;Dbxref=GenBank:WP_001830112.1;Name=WP_001830112.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476645.1;locus_tag=CP553_RS01055;product=phosphate acyltransferase PlsX;protein_id=WP_001830112.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	37533	38459	.	+	.	ID=gene-CP553_RS01060;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=CP553_RS01060;old_locus_tag=CP553_01130
NZ_PCFD01000002.1	Protein Homology	CDS	37533	38459	.	+	0	ID=cds-WP_001830062.1;Parent=gene-CP553_RS01060;Dbxref=GenBank:WP_001830062.1;Name=WP_001830062.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499736.1;locus_tag=CP553_RS01060;product=ACP S-malonyltransferase;protein_id=WP_001830062.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	38452	39186	.	+	.	ID=gene-CP553_RS01065;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CP553_RS01065;old_locus_tag=CP553_01135
NZ_PCFD01000002.1	Protein Homology	CDS	38452	39186	.	+	0	ID=cds-WP_001830161.1;Parent=gene-CP553_RS01065;Dbxref=GenBank:WP_001830161.1;Name=WP_001830161.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499737.1;locus_tag=CP553_RS01065;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_001830161.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	39350	39583	.	+	.	ID=gene-CP553_RS01070;Name=CP553_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01070;old_locus_tag=CP553_01140
NZ_PCFD01000002.1	Protein Homology	CDS	39350	39583	.	+	0	ID=cds-WP_001830184.1;Parent=gene-CP553_RS01070;Dbxref=GenBank:WP_001830184.1;Name=WP_001830184.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1;locus_tag=CP553_RS01070;product=acyl carrier protein;protein_id=WP_001830184.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	39698	40435	.	+	.	ID=gene-CP553_RS01075;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=CP553_RS01075;old_locus_tag=CP553_01145
NZ_PCFD01000002.1	Protein Homology	CDS	39698	40435	.	+	0	ID=cds-WP_001830158.1;Parent=gene-CP553_RS01075;Dbxref=GenBank:WP_001830158.1;Name=WP_001830158.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275967.1;locus_tag=CP553_RS01075;product=ribonuclease III;protein_id=WP_001830158.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	40562	44131	.	+	.	ID=gene-CP553_RS01080;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=CP553_RS01080;old_locus_tag=CP553_01150
NZ_PCFD01000002.1	Protein Homology	CDS	40562	44131	.	+	0	ID=cds-WP_001833035.1;Parent=gene-CP553_RS01080;Dbxref=GenBank:WP_001833035.1;Name=WP_001833035.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505738.1;locus_tag=CP553_RS01080;product=chromosome segregation protein SMC;protein_id=WP_001833035.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	44128	45354	.	+	.	ID=gene-CP553_RS01085;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=CP553_RS01085;old_locus_tag=CP553_01155
NZ_PCFD01000002.1	Protein Homology	CDS	44128	45354	.	+	0	ID=cds-WP_002439477.1;Parent=gene-CP553_RS01085;Dbxref=GenBank:WP_002439477.1;Name=WP_002439477.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496451.1;locus_tag=CP553_RS01085;product=signal recognition particle-docking protein FtsY;protein_id=WP_002439477.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	45356	45688	.	+	.	ID=gene-CP553_RS01090;Name=CP553_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01090;old_locus_tag=CP553_01160
NZ_PCFD01000002.1	Protein Homology	CDS	45356	45688	.	+	0	ID=cds-WP_001830102.1;Parent=gene-CP553_RS01090;Dbxref=GenBank:WP_001830102.1;Name=WP_001830102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499743.1;locus_tag=CP553_RS01090;product=putative DNA-binding protein;protein_id=WP_001830102.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	45719	47086	.	+	.	ID=gene-CP553_RS01095;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=CP553_RS01095;old_locus_tag=CP553_01165
NZ_PCFD01000002.1	Protein Homology	CDS	45719	47086	.	+	0	ID=cds-WP_001830113.1;Parent=gene-CP553_RS01095;Dbxref=GenBank:WP_001830113.1;Name=WP_001830113.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457378.1;locus_tag=CP553_RS01095;product=signal recognition particle protein;protein_id=WP_001830113.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	47518	47793	.	+	.	ID=gene-CP553_RS01100;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=CP553_RS01100;old_locus_tag=CP553_01170
NZ_PCFD01000002.1	Protein Homology	CDS	47518	47793	.	+	0	ID=cds-WP_002439483.1;Parent=gene-CP553_RS01100;Dbxref=GenBank:WP_002439483.1;Name=WP_002439483.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499745.1;locus_tag=CP553_RS01100;product=30S ribosomal protein S16;protein_id=WP_002439483.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	47920	48423	.	+	.	ID=gene-CP553_RS01105;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=CP553_RS01105;old_locus_tag=CP553_01175
NZ_PCFD01000002.1	Protein Homology	CDS	47920	48423	.	+	0	ID=cds-WP_001832559.1;Parent=gene-CP553_RS01105;Dbxref=GenBank:WP_001832559.1;Name=WP_001832559.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499746.1;locus_tag=CP553_RS01105;product=ribosome maturation factor RimM;protein_id=WP_001832559.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	48423	49160	.	+	.	ID=gene-CP553_RS01110;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=CP553_RS01110;old_locus_tag=CP553_01180
NZ_PCFD01000002.1	Protein Homology	CDS	48423	49160	.	+	0	ID=cds-WP_001829466.1;Parent=gene-CP553_RS01110;Dbxref=GenBank:WP_001829466.1;Name=WP_001829466.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275960.1;locus_tag=CP553_RS01110;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_001829466.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	49266	49616	.	+	.	ID=gene-CP553_RS01115;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=CP553_RS01115;old_locus_tag=CP553_01185
NZ_PCFD01000002.1	Protein Homology	CDS	49266	49616	.	+	0	ID=cds-WP_002436293.1;Parent=gene-CP553_RS01115;Dbxref=GenBank:WP_002436293.1;Name=WP_002436293.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303276.1;locus_tag=CP553_RS01115;product=50S ribosomal protein L19;protein_id=WP_002436293.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	50147	52750	.	-	.	ID=gene-CP553_RS01120;Name=CP553_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01120;old_locus_tag=CP553_01190
NZ_PCFD01000002.1	Protein Homology	CDS	50147	52750	.	-	0	ID=cds-WP_002439489.1;Parent=gene-CP553_RS01120;Dbxref=GenBank:WP_002439489.1;Name=WP_002439489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495762.1;locus_tag=CP553_RS01120;product=YfhO family protein;protein_id=WP_002439489.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	52743	55343	.	-	.	ID=gene-CP553_RS01125;Name=CP553_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01125;old_locus_tag=CP553_01195
NZ_PCFD01000002.1	Protein Homology	CDS	52743	55343	.	-	0	ID=cds-WP_002439492.1;Parent=gene-CP553_RS01125;Dbxref=GenBank:WP_002439492.1;Name=WP_002439492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486159.1;locus_tag=CP553_RS01125;product=YfhO family protein;protein_id=WP_002439492.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	55672	56535	.	+	.	ID=gene-CP553_RS01130;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=CP553_RS01130;old_locus_tag=CP553_01205
NZ_PCFD01000002.1	Protein Homology	CDS	55672	56535	.	+	0	ID=cds-WP_001829495.1;Parent=gene-CP553_RS01130;Dbxref=GenBank:WP_001829495.1;Name=WP_001829495.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829495.1;locus_tag=CP553_RS01130;product=ribosome biogenesis GTPase YlqF;protein_id=WP_001829495.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	56540	57310	.	+	.	ID=gene-CP553_RS01135;Name=CP553_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01135;old_locus_tag=CP553_01210
NZ_PCFD01000002.1	Protein Homology	CDS	56540	57310	.	+	0	ID=cds-WP_001829514.1;Parent=gene-CP553_RS01135;Dbxref=GenBank:WP_001829514.1;Name=WP_001829514.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368499.1;locus_tag=CP553_RS01135;product=ribonuclease HII;protein_id=WP_001829514.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	57418	58584	.	+	.	ID=gene-CP553_RS01140;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=CP553_RS01140;old_locus_tag=CP553_01215
NZ_PCFD01000002.1	Protein Homology	CDS	57418	58584	.	+	0	ID=cds-WP_002439496.1;Parent=gene-CP553_RS01140;Dbxref=GenBank:WP_002439496.1;Name=WP_002439496.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190114.1;locus_tag=CP553_RS01140;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_002439496.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	58606	59514	.	+	.	ID=gene-CP553_RS01145;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=CP553_RS01145;old_locus_tag=CP553_01220
NZ_PCFD01000002.1	Protein Homology	CDS	58606	59514	.	+	0	ID=cds-WP_001829473.1;Parent=gene-CP553_RS01145;Dbxref=GenBank:WP_001829473.1;Name=WP_001829473.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499754.1;locus_tag=CP553_RS01145;product=succinate--CoA ligase subunit alpha;protein_id=WP_001829473.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	60320	61192	.	+	.	ID=gene-CP553_RS01150;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=CP553_RS01150;old_locus_tag=CP553_01230
NZ_PCFD01000002.1	Protein Homology	CDS	60320	61192	.	+	0	ID=cds-WP_001829468.1;Parent=gene-CP553_RS01150;Dbxref=GenBank:WP_001829468.1;Name=WP_001829468.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491388.1;locus_tag=CP553_RS01150;product=DNA-processing protein DprA;protein_id=WP_001829468.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	61375	63444	.	+	.	ID=gene-CP553_RS01155;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=CP553_RS01155;old_locus_tag=CP553_01235
NZ_PCFD01000002.1	Protein Homology	CDS	61375	63444	.	+	0	ID=cds-WP_001829508.1;Parent=gene-CP553_RS01155;Dbxref=GenBank:WP_001829508.1;Name=WP_001829508.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453083.1;locus_tag=CP553_RS01155;product=type I DNA topoisomerase;protein_id=WP_001829508.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	63469	64776	.	+	.	ID=gene-CP553_RS01160;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=CP553_RS01160;old_locus_tag=CP553_01240
NZ_PCFD01000002.1	Protein Homology	CDS	63469	64776	.	+	0	ID=cds-WP_002456226.1;Parent=gene-CP553_RS01160;Dbxref=GenBank:WP_002456226.1;Name=WP_002456226.1;Ontology_term=GO:0008033,GO:0047151,GO:0050660,GO:0005737;gbkey=CDS;gene=trmFO;go_component=cytoplasm|0005737||IEA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C 5%2C10-methylenetetrahydrofolate-dependent|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499759.1;locus_tag=CP553_RS01160;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;protein_id=WP_002456226.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	65031	65891	.	+	.	ID=gene-CP553_RS01165;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=CP553_RS01165;old_locus_tag=CP553_01245
NZ_PCFD01000002.1	Protein Homology	CDS	65031	65891	.	+	0	ID=cds-WP_002439503.1;Parent=gene-CP553_RS01165;Dbxref=GenBank:WP_002439503.1;Name=WP_002439503.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638383.1;locus_tag=CP553_RS01165;product=tyrosine recombinase XerC;protein_id=WP_002439503.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	65895	66437	.	+	.	ID=gene-CP553_RS01170;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=CP553_RS01170;old_locus_tag=CP553_01250
NZ_PCFD01000002.1	Protein Homology	CDS	65895	66437	.	+	0	ID=cds-WP_001829498.1;Parent=gene-CP553_RS01170;Dbxref=GenBank:WP_001829498.1;Name=WP_001829498.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365078.1;locus_tag=CP553_RS01170;product=ATP-dependent protease subunit HslV;protein_id=WP_001829498.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	66506	67909	.	+	.	ID=gene-CP553_RS01175;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=CP553_RS01175;old_locus_tag=CP553_01255
NZ_PCFD01000002.1	Protein Homology	CDS	66506	67909	.	+	0	ID=cds-WP_001829474.1;Parent=gene-CP553_RS01175;Dbxref=GenBank:WP_001829474.1;Name=WP_001829474.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491368.1;locus_tag=CP553_RS01175;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_001829474.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	67933	68703	.	+	.	ID=gene-CP553_RS01180;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=CP553_RS01180;old_locus_tag=CP553_01260
NZ_PCFD01000002.1	Protein Homology	CDS	67933	68703	.	+	0	ID=cds-WP_002439506.1;Parent=gene-CP553_RS01180;Dbxref=GenBank:WP_002439506.1;Name=WP_002439506.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439506.1;locus_tag=CP553_RS01180;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WP_002439506.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	69066	69854	.	+	.	ID=gene-CP553_RS01185;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=CP553_RS01185;old_locus_tag=CP553_01265
NZ_PCFD01000002.1	Protein Homology	CDS	69066	69854	.	+	0	ID=cds-WP_001832557.1;Parent=gene-CP553_RS01185;Dbxref=GenBank:WP_001832557.1;Name=WP_001832557.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900141.1;locus_tag=CP553_RS01185;product=30S ribosomal protein S2;protein_id=WP_001832557.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	70006	70884	.	+	.	ID=gene-CP553_RS01190;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=CP553_RS01190;old_locus_tag=CP553_01270
NZ_PCFD01000002.1	Protein Homology	CDS	70006	70884	.	+	0	ID=cds-WP_002439509.1;Parent=gene-CP553_RS01190;Dbxref=GenBank:WP_002439509.1;Name=WP_002439509.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468450.1;locus_tag=CP553_RS01190;product=translation elongation factor Ts;protein_id=WP_002439509.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	71025	71747	.	+	.	ID=gene-CP553_RS01195;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=CP553_RS01195;old_locus_tag=CP553_01275
NZ_PCFD01000002.1	Protein Homology	CDS	71025	71747	.	+	0	ID=cds-WP_002439511.1;Parent=gene-CP553_RS01195;Dbxref=GenBank:WP_002439511.1;Name=WP_002439511.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057332.1;locus_tag=CP553_RS01195;product=UMP kinase;protein_id=WP_002439511.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	71764	72318	.	+	.	ID=gene-CP553_RS01200;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=CP553_RS01200;old_locus_tag=CP553_01280
NZ_PCFD01000002.1	Protein Homology	CDS	71764	72318	.	+	0	ID=cds-WP_002439513.1;Parent=gene-CP553_RS01200;Dbxref=GenBank:WP_002439513.1;Name=WP_002439513.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275941.1;locus_tag=CP553_RS01200;product=ribosome recycling factor;protein_id=WP_002439513.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	72539	73309	.	+	.	ID=gene-CP553_RS01205;Name=CP553_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01205;old_locus_tag=CP553_01285
NZ_PCFD01000002.1	Protein Homology	CDS	72539	73309	.	+	0	ID=cds-WP_001832561.1;Parent=gene-CP553_RS01205;Dbxref=GenBank:WP_001832561.1;Name=WP_001832561.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499770.1;locus_tag=CP553_RS01205;product=isoprenyl transferase;protein_id=WP_001832561.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	73313	74095	.	+	.	ID=gene-CP553_RS01210;Name=CP553_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01210;old_locus_tag=CP553_01290
NZ_PCFD01000002.1	Protein Homology	CDS	73313	74095	.	+	0	ID=cds-WP_001829499.1;Parent=gene-CP553_RS01210;Dbxref=GenBank:WP_001829499.1;Name=WP_001829499.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499771.1;locus_tag=CP553_RS01210;product=phosphatidate cytidylyltransferase;protein_id=WP_001829499.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	74329	75615	.	+	.	ID=gene-CP553_RS01215;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=CP553_RS01215;old_locus_tag=CP553_01295
NZ_PCFD01000002.1	Protein Homology	CDS	74329	75615	.	+	0	ID=cds-WP_001829501.1;Parent=gene-CP553_RS01215;Dbxref=GenBank:WP_001829501.1;Name=WP_001829501.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121122.1;locus_tag=CP553_RS01215;product=RIP metalloprotease RseP;protein_id=WP_001829501.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	75634	77337	.	+	.	ID=gene-CP553_RS01220;Name=CP553_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01220;old_locus_tag=CP553_01300
NZ_PCFD01000002.1	Protein Homology	CDS	75634	77337	.	+	0	ID=cds-WP_001829513.1;Parent=gene-CP553_RS01220;Dbxref=GenBank:WP_001829513.1;Name=WP_001829513.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499773.1;locus_tag=CP553_RS01220;product=proline--tRNA ligase;protein_id=WP_001829513.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	77587	81897	.	+	.	ID=gene-CP553_RS01225;Name=CP553_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01225;old_locus_tag=CP553_01305
NZ_PCFD01000002.1	Protein Homology	CDS	77587	81897	.	+	0	ID=cds-WP_099833848.1;Parent=gene-CP553_RS01225;Dbxref=GenBank:WP_099833848.1;Name=WP_099833848.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499774.1;locus_tag=CP553_RS01225;product=PolC-type DNA polymerase III;protein_id=WP_099833848.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	82076	82543	.	+	.	ID=gene-CP553_RS01230;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=CP553_RS01230;old_locus_tag=CP553_01310
NZ_PCFD01000002.1	Protein Homology	CDS	82076	82543	.	+	0	ID=cds-WP_002439519.1;Parent=gene-CP553_RS01230;Dbxref=GenBank:WP_002439519.1;Name=WP_002439519.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499775.1;locus_tag=CP553_RS01230;product=ribosome maturation factor RimP;protein_id=WP_002439519.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	82564	83787	.	+	.	ID=gene-CP553_RS01235;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CP553_RS01235;old_locus_tag=CP553_01315
NZ_PCFD01000002.1	Protein Homology	CDS	82564	83787	.	+	0	ID=cds-WP_001829457.1;Parent=gene-CP553_RS01235;Dbxref=GenBank:WP_001829457.1;Name=WP_001829457.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464328.1;locus_tag=CP553_RS01235;product=transcription termination factor NusA;protein_id=WP_001829457.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	83805	84089	.	+	.	ID=gene-CP553_RS01240;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=CP553_RS01240;old_locus_tag=CP553_01320
NZ_PCFD01000002.1	Protein Homology	CDS	83805	84089	.	+	0	ID=cds-WP_001829465.1;Parent=gene-CP553_RS01240;Dbxref=GenBank:WP_001829465.1;Name=WP_001829465.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499777.1;locus_tag=CP553_RS01240;product=RNase P modulator RnpM;protein_id=WP_001829465.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	84089	84406	.	+	.	ID=gene-CP553_RS01245;Name=CP553_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01245;old_locus_tag=CP553_01325
NZ_PCFD01000002.1	Protein Homology	CDS	84089	84406	.	+	0	ID=cds-WP_002439520.1;Parent=gene-CP553_RS01245;Dbxref=GenBank:WP_002439520.1;Name=WP_002439520.1;Ontology_term=GO:0003723,GO:0003735;gbkey=CDS;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439520.1;locus_tag=CP553_RS01245;product=YlxQ family RNA-binding protein;protein_id=WP_002439520.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	84411	86573	.	+	.	ID=gene-CP553_RS01250;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=CP553_RS01250;old_locus_tag=CP553_01330
NZ_PCFD01000002.1	Protein Homology	CDS	84411	86573	.	+	0	ID=cds-WP_116842976.1;Parent=gene-CP553_RS01250;Dbxref=GenBank:WP_116842976.1;Name=WP_116842976.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499779.1;locus_tag=CP553_RS01250;product=translation initiation factor IF-2;protein_id=WP_116842976.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	86876	87226	.	+	.	ID=gene-CP553_RS01255;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=CP553_RS01255;old_locus_tag=CP553_01335
NZ_PCFD01000002.1	Protein Homology	CDS	86876	87226	.	+	0	ID=cds-WP_001829509.1;Parent=gene-CP553_RS01255;Dbxref=GenBank:WP_001829509.1;Name=WP_001829509.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499780.1;locus_tag=CP553_RS01255;product=30S ribosome-binding factor RbfA;protein_id=WP_001829509.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	87364	88281	.	+	.	ID=gene-CP553_RS01260;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=CP553_RS01260;old_locus_tag=CP553_01340
NZ_PCFD01000002.1	Protein Homology	CDS	87364	88281	.	+	0	ID=cds-WP_002439525.1;Parent=gene-CP553_RS01260;Dbxref=GenBank:WP_002439525.1;Name=WP_002439525.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464330.1;locus_tag=CP553_RS01260;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_002439525.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	88297	89268	.	+	.	ID=gene-CP553_RS01265;Name=CP553_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01265;old_locus_tag=CP553_01345
NZ_PCFD01000002.1	Protein Homology	CDS	88297	89268	.	+	0	ID=cds-WP_001832563.1;Parent=gene-CP553_RS01265;Dbxref=GenBank:WP_001832563.1;Name=WP_001832563.1;Ontology_term=GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499782.1;locus_tag=CP553_RS01265;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_001832563.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	89388	89657	.	+	.	ID=gene-CP553_RS01270;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=CP553_RS01270;old_locus_tag=CP553_01350
NZ_PCFD01000002.1	Protein Homology	CDS	89388	89657	.	+	0	ID=cds-WP_002439528.1;Parent=gene-CP553_RS01270;Dbxref=GenBank:WP_002439528.1;Name=WP_002439528.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=CP553_RS01270;product=30S ribosomal protein S15;protein_id=WP_002439528.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	89789	91894	.	+	.	ID=gene-CP553_RS01275;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=CP553_RS01275;old_locus_tag=CP553_01355
NZ_PCFD01000002.1	Protein Homology	CDS	89789	91894	.	+	0	ID=cds-WP_001832554.1;Parent=gene-CP553_RS01275;Dbxref=GenBank:WP_001832554.1;Name=WP_001832554.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494421.1;locus_tag=CP553_RS01275;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_001832554.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	92262	93935	.	+	.	ID=gene-CP553_RS01280;Name=rnjB;gbkey=Gene;gene=rnjB;gene_biotype=protein_coding;locus_tag=CP553_RS01280;old_locus_tag=CP553_01360
NZ_PCFD01000002.1	Protein Homology	CDS	92262	93935	.	+	0	ID=cds-WP_002457357.1;Parent=gene-CP553_RS01280;Dbxref=GenBank:WP_002457357.1;Name=WP_002457357.1;gbkey=CDS;gene=rnjB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455407.1;locus_tag=CP553_RS01280;product=ribonuclease J2;protein_id=WP_002457357.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	94201	96594	.	+	.	ID=gene-CP553_RS01285;Name=CP553_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01285;old_locus_tag=CP553_01365
NZ_PCFD01000002.1	Protein Homology	CDS	94201	96594	.	+	0	ID=cds-WP_002439534.1;Parent=gene-CP553_RS01285;Dbxref=GenBank:WP_002439534.1;Name=WP_002439534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498353.1;locus_tag=CP553_RS01285;product=DNA translocase FtsK;protein_id=WP_002439534.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	96597	97310	.	+	.	ID=gene-CP553_RS01290;Name=CP553_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01290;old_locus_tag=CP553_01370
NZ_PCFD01000002.1	Protein Homology	CDS	96597	97310	.	+	0	ID=cds-WP_002439536.1;Parent=gene-CP553_RS01290;Dbxref=GenBank:WP_002439536.1;Name=WP_002439536.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012101842.1;locus_tag=CP553_RS01290;product=GntR family transcriptional regulator;protein_id=WP_002439536.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	97341	98612	.	+	.	ID=gene-CP553_RS01295;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=protein_coding;locus_tag=CP553_RS01295;old_locus_tag=CP553_01375
NZ_PCFD01000002.1	Protein Homology	CDS	97341	98612	.	+	0	ID=cds-WP_165798623.1;Parent=gene-CP553_RS01295;Dbxref=GenBank:WP_165798623.1;Name=WP_165798623.1;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470250.1;locus_tag=CP553_RS01295;product=EF-P 5-aminopentanol modification-associated protein YfmF;protein_id=WP_165798623.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	98612	99901	.	+	.	ID=gene-CP553_RS01300;Name=yfmH;gbkey=Gene;gene=yfmH;gene_biotype=protein_coding;locus_tag=CP553_RS01300;old_locus_tag=CP553_01380
NZ_PCFD01000002.1	Protein Homology	CDS	98612	99901	.	+	0	ID=cds-WP_001832569.1;Parent=gene-CP553_RS01300;Dbxref=GenBank:WP_001832569.1;Name=WP_001832569.1;gbkey=CDS;gene=yfmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113623.1;locus_tag=CP553_RS01300;product=EF-P 5-aminopentanol modification-associated protein YfmH;protein_id=WP_001832569.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	99898	100602	.	+	.	ID=gene-CP553_RS01305;Name=ymfI;gbkey=Gene;gene=ymfI;gene_biotype=protein_coding;locus_tag=CP553_RS01305;old_locus_tag=CP553_01385
NZ_PCFD01000002.1	Protein Homology	CDS	99898	100602	.	+	0	ID=cds-WP_002439542.1;Parent=gene-CP553_RS01305;Dbxref=GenBank:WP_002439542.1;Name=WP_002439542.1;gbkey=CDS;gene=ymfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439542.1;locus_tag=CP553_RS01305;product=elongation factor P 5-aminopentanone reductase;protein_id=WP_002439542.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	100755	101582	.	+	.	ID=gene-CP553_RS01310;Name=CP553_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01310;old_locus_tag=CP553_01390
NZ_PCFD01000002.1	Protein Homology	CDS	100755	101582	.	+	0	ID=cds-WP_002456221.1;Parent=gene-CP553_RS01310;Dbxref=GenBank:WP_002456221.1;Name=WP_002456221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499791.1;locus_tag=CP553_RS01310;product=YmfK family protein;protein_id=WP_002456221.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	101601	101993	.	+	.	ID=gene-CP553_RS01315;Name=CP553_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01315;old_locus_tag=CP553_01395
NZ_PCFD01000002.1	Protein Homology	CDS	101601	101993	.	+	0	ID=cds-WP_001832565.1;Parent=gene-CP553_RS01315;Dbxref=GenBank:WP_001832565.1;Name=WP_001832565.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832565.1;locus_tag=CP553_RS01315;product=helix-turn-helix domain-containing protein;protein_id=WP_001832565.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	102022	102603	.	+	.	ID=gene-CP553_RS01320;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=CP553_RS01320;old_locus_tag=CP553_01400
NZ_PCFD01000002.1	Protein Homology	CDS	102022	102603	.	+	0	ID=cds-WP_002439546.1;Parent=gene-CP553_RS01320;Dbxref=GenBank:WP_002439546.1;Name=WP_002439546.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439546.1;locus_tag=CP553_RS01320;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_002439546.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	103056	104201	.	+	.	ID=gene-CP553_RS01325;Name=CP553_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01325;old_locus_tag=CP553_01405
NZ_PCFD01000002.1	Protein Homology	CDS	103056	104201	.	+	0	ID=cds-WP_002439549.1;Parent=gene-CP553_RS01325;Dbxref=GenBank:WP_002439549.1;Name=WP_002439549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476666.1;locus_tag=CP553_RS01325;product=CinA family nicotinamide mononucleotide deamidase-related protein;protein_id=WP_002439549.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	104372	105421	.	+	.	ID=gene-CP553_RS01330;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=CP553_RS01330;old_locus_tag=CP553_01410
NZ_PCFD01000002.1	Protein Homology	CDS	104372	105421	.	+	0	ID=cds-WP_002439552.1;Parent=gene-CP553_RS01330;Dbxref=GenBank:WP_002439552.1;Name=WP_002439552.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361431.1;locus_tag=CP553_RS01330;product=recombinase RecA;protein_id=WP_002439552.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	105647	107206	.	+	.	ID=gene-CP553_RS01335;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=CP553_RS01335;old_locus_tag=CP553_01415
NZ_PCFD01000002.1	Protein Homology	CDS	105647	107206	.	+	0	ID=cds-WP_001829512.1;Parent=gene-CP553_RS01335;Dbxref=GenBank:WP_001829512.1;Name=WP_001829512.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459258.1;locus_tag=CP553_RS01335;product=ribonuclease Y;protein_id=WP_001829512.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	107296	107511	.	-	.	ID=gene-CP553_RS01340;Name=CP553_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01340;old_locus_tag=CP553_01420
NZ_PCFD01000002.1	Protein Homology	CDS	107296	107511	.	-	0	ID=cds-WP_002439555.1;Parent=gene-CP553_RS01340;Dbxref=GenBank:WP_002439555.1;Name=WP_002439555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499797.1;locus_tag=CP553_RS01340;product=hypothetical protein;protein_id=WP_002439555.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	107675	108469	.	+	.	ID=gene-CP553_RS01345;Name=CP553_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01345;old_locus_tag=CP553_01425
NZ_PCFD01000002.1	Protein Homology	CDS	107675	108469	.	+	0	ID=cds-WP_002439557.1;Parent=gene-CP553_RS01345;Dbxref=GenBank:WP_002439557.1;Name=WP_002439557.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439557.1;locus_tag=CP553_RS01345;product=TIGR00282 family metallophosphoesterase;protein_id=WP_002439557.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	108582	110342	.	+	.	ID=gene-CP553_RS01350;Name=CP553_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01350;old_locus_tag=CP553_01430
NZ_PCFD01000002.1	Protein Homology	CDS	108582	110342	.	+	0	ID=cds-WP_002456220.1;Parent=gene-CP553_RS01350;Dbxref=GenBank:WP_002456220.1;Name=WP_002456220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499799.1;locus_tag=CP553_RS01350;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_002456220.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	110343	111209	.	+	.	ID=gene-CP553_RS01355;Name=CP553_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01355;old_locus_tag=CP553_01435
NZ_PCFD01000002.1	Protein Homology	CDS	110343	111209	.	+	0	ID=cds-WP_002439562.1;Parent=gene-CP553_RS01355;Dbxref=GenBank:WP_002439562.1;Name=WP_002439562.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499800.1;locus_tag=CP553_RS01355;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_002439562.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	111795	112412	.	+	.	ID=gene-CP553_RS01360;Name=CP553_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01360;old_locus_tag=CP553_01440
NZ_PCFD01000002.1	Protein Homology	CDS	111795	112412	.	+	0	ID=cds-WP_001832558.1;Parent=gene-CP553_RS01360;Dbxref=GenBank:WP_001832558.1;Name=WP_001832558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832558.1;locus_tag=CP553_RS01360;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_001832558.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	112469	112759	.	+	.	ID=gene-CP553_RS01365;Name=CP553_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01365;old_locus_tag=CP553_01445
NZ_PCFD01000002.1	Protein Homology	CDS	112469	112759	.	+	0	ID=cds-WP_001829496.1;Parent=gene-CP553_RS01365;Dbxref=GenBank:WP_001829496.1;Name=WP_001829496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829496.1;locus_tag=CP553_RS01365;product=thiamine-binding protein;protein_id=WP_001829496.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	113102	114646	.	+	.	ID=gene-CP553_RS01370;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=CP553_RS01370;old_locus_tag=CP553_01450
NZ_PCFD01000002.1	Protein Homology	CDS	113102	114646	.	+	0	ID=cds-WP_002439565.1;Parent=gene-CP553_RS01370;Dbxref=GenBank:WP_002439565.1;Name=WP_002439565.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499802.1;locus_tag=CP553_RS01370;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_002439565.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	114648	115013	.	+	.	ID=gene-CP553_RS01375;Name=CP553_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01375;old_locus_tag=CP553_01455
NZ_PCFD01000002.1	Protein Homology	CDS	114648	115013	.	+	0	ID=cds-WP_002439569.1;Parent=gene-CP553_RS01375;Dbxref=GenBank:WP_002439569.1;Name=WP_002439569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113794.1;locus_tag=CP553_RS01375;product=RicAFT regulatory complex protein RicA family protein;protein_id=WP_002439569.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	115037	115531	.	+	.	ID=gene-CP553_RS01380;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=CP553_RS01380;old_locus_tag=CP553_01460
NZ_PCFD01000002.1	Protein Homology	CDS	115037	115531	.	+	0	ID=cds-WP_001829480.1;Parent=gene-CP553_RS01380;Dbxref=GenBank:WP_001829480.1;Name=WP_001829480.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829480.1;locus_tag=CP553_RS01380;product=energy coupling factor transporter S component ThiW;protein_id=WP_001829480.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	115729	118350	.	+	.	ID=gene-CP553_RS01385;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=CP553_RS01385;old_locus_tag=CP553_01465
NZ_PCFD01000002.1	Protein Homology	CDS	115729	118350	.	+	0	ID=cds-WP_002456219.1;Parent=gene-CP553_RS01385;Dbxref=GenBank:WP_002456219.1;Name=WP_002456219.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368423.1;locus_tag=CP553_RS01385;product=DNA mismatch repair protein MutS;protein_id=WP_002456219.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	118365	120302	.	+	.	ID=gene-CP553_RS01390;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CP553_RS01390;old_locus_tag=CP553_01470
NZ_PCFD01000002.1	Protein Homology	CDS	118365	120302	.	+	0	ID=cds-WP_002439573.1;Parent=gene-CP553_RS01390;Dbxref=GenBank:WP_002439573.1;Name=WP_002439573.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439573.1;locus_tag=CP553_RS01390;product=DNA mismatch repair endonuclease MutL;protein_id=WP_002439573.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	120316	120849	.	+	.	ID=gene-CP553_RS01395;Name=CP553_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01395;old_locus_tag=CP553_01475
NZ_PCFD01000002.1	Protein Homology	CDS	120316	120849	.	+	0	ID=cds-WP_002439577.1;Parent=gene-CP553_RS01395;Dbxref=GenBank:WP_002439577.1;Name=WP_002439577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473712.1;locus_tag=CP553_RS01395;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_002439577.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	121224	122048	.	+	.	ID=gene-CP553_RS01400;Name=CP553_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01400;old_locus_tag=CP553_01480
NZ_PCFD01000002.1	Protein Homology	CDS	121224	122048	.	+	0	ID=cds-WP_001829504.1;Parent=gene-CP553_RS01400;Dbxref=GenBank:WP_001829504.1;Name=WP_001829504.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499808.1;locus_tag=CP553_RS01400;product=MIP/aquaporin family protein;protein_id=WP_001829504.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	122202	123701	.	+	.	ID=gene-CP553_RS01405;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=CP553_RS01405;old_locus_tag=CP553_01485
NZ_PCFD01000002.1	Protein Homology	CDS	122202	123701	.	+	0	ID=cds-WP_002439580.1;Parent=gene-CP553_RS01405;Dbxref=GenBank:WP_002439580.1;Name=WP_002439580.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638335.1;locus_tag=CP553_RS01405;product=glycerol kinase GlpK;protein_id=WP_002439580.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	123878	125551	.	+	.	ID=gene-CP553_RS01410;Name=CP553_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01410;old_locus_tag=CP553_01490
NZ_PCFD01000002.1	Protein Homology	CDS	123878	125551	.	+	0	ID=cds-WP_002439581.1;Parent=gene-CP553_RS01410;Dbxref=GenBank:WP_002439581.1;Name=WP_002439581.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446326.1;locus_tag=CP553_RS01410;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_002439581.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	125775	126701	.	+	.	ID=gene-CP553_RS01415;Name=CP553_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01415;old_locus_tag=CP553_01495
NZ_PCFD01000002.1	Protein Homology	CDS	125775	126701	.	+	0	ID=cds-WP_001832556.1;Parent=gene-CP553_RS01415;Dbxref=GenBank:WP_001832556.1;Name=WP_001832556.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487400.1;locus_tag=CP553_RS01415;product=alpha/beta hydrolase;protein_id=WP_001832556.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	126713	127711	.	+	.	ID=gene-CP553_RS01420;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=CP553_RS01420;old_locus_tag=CP553_01500
NZ_PCFD01000002.1	Protein Homology	CDS	126713	127711	.	+	0	ID=cds-WP_002439583.1;Parent=gene-CP553_RS01420;Dbxref=GenBank:WP_002439583.1;Name=WP_002439583.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473768.1;locus_tag=CP553_RS01420;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_002439583.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	127665	127904	.	+	.	ID=gene-CP553_RS01425;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=CP553_RS01425;old_locus_tag=CP553_01505
NZ_PCFD01000002.1	Protein Homology	CDS	127665	127904	.	+	0	ID=cds-WP_001829517.1;Parent=gene-CP553_RS01425;Dbxref=GenBank:WP_001829517.1;Name=WP_001829517.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499813.1;locus_tag=CP553_RS01425;product=RNA chaperone Hfq;protein_id=WP_001829517.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	128126	128602	.	-	.	ID=gene-CP553_RS01430;Name=CP553_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01430;old_locus_tag=CP553_01510
NZ_PCFD01000002.1	Protein Homology	CDS	128126	128602	.	-	0	ID=cds-WP_001829502.1;Parent=gene-CP553_RS01430;Dbxref=GenBank:WP_001829502.1;Name=WP_001829502.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499814.1;locus_tag=CP553_RS01430;product=glutathione peroxidase;protein_id=WP_001829502.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	128703	129953	.	+	.	ID=gene-CP553_RS01435;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=CP553_RS01435;old_locus_tag=CP553_01515
NZ_PCFD01000002.1	Protein Homology	CDS	128703	129953	.	+	0	ID=cds-WP_002439586.1;Parent=gene-CP553_RS01435;Dbxref=GenBank:WP_002439586.1;Name=WP_002439586.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368205.1;locus_tag=CP553_RS01435;product=GTPase HflX;protein_id=WP_002439586.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	129969	131207	.	+	.	ID=gene-CP553_RS01440;Name=CP553_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01440;old_locus_tag=CP553_01520
NZ_PCFD01000002.1	Protein Homology	CDS	129969	131207	.	+	0	ID=cds-WP_001829506.1;Parent=gene-CP553_RS01440;Dbxref=GenBank:WP_001829506.1;Name=WP_001829506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446331.1;locus_tag=CP553_RS01440;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_001829506.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	131689	132054	.	+	.	ID=gene-CP553_RS01445;Name=CP553_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01445;old_locus_tag=CP553_01525
NZ_PCFD01000002.1	Protein Homology	CDS	131689	132054	.	+	0	ID=cds-WP_001829488.1;Parent=gene-CP553_RS01445;Dbxref=GenBank:WP_001829488.1;Name=WP_001829488.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463893.1;locus_tag=CP553_RS01445;product=MerR family transcriptional regulator;protein_id=WP_001829488.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	132073	133413	.	+	.	ID=gene-CP553_RS01450;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=CP553_RS01450;old_locus_tag=CP553_01530
NZ_PCFD01000002.1	Protein Homology	CDS	132073	133413	.	+	0	ID=cds-WP_001829492.1;Parent=gene-CP553_RS01450;Dbxref=GenBank:WP_001829492.1;Name=WP_001829492.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499818.1;locus_tag=CP553_RS01450;product=type I glutamate--ammonia ligase;protein_id=WP_001829492.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	pseudogene	133557	133925	.	-	.	ID=gene-CP553_RS12970;Name=CP553_RS12970;end_range=133925,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12970;old_locus_tag=CP553_01535;partial=true;pseudo=true
NZ_PCFD01000002.1	Protein Homology	CDS	133557	133925	.	-	0	ID=cds-CP553_RS12970;Parent=gene-CP553_RS12970;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0009009;end_range=133925,.;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493725.1;locus_tag=CP553_RS12970;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11
NZ_PCFD01000002.1	RefSeq	pseudogene	133921	134307	.	+	.	ID=gene-CP553_RS01460;Name=CP553_RS01460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS01460;old_locus_tag=CP553_01540;partial=true;pseudo=true;start_range=.,133921
NZ_PCFD01000002.1	Protein Homology	CDS	133921	134307	.	+	0	ID=cds-CP553_RS01460;Parent=gene-CP553_RS01460;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499668.1;locus_tag=CP553_RS01460;partial=true;product=phage portal protein;pseudo=true;start_range=.,133921;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	134297	135643	.	+	.	ID=gene-CP553_RS01465;Name=CP553_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01465;old_locus_tag=CP553_01545
NZ_PCFD01000002.1	Protein Homology	CDS	134297	135643	.	+	0	ID=cds-WP_001829490.1;Parent=gene-CP553_RS01465;Dbxref=GenBank:WP_001829490.1;Name=WP_001829490.1;Ontology_term=GO:0016032,GO:0019068,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral process|0016032||IEA,virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485350.1;locus_tag=CP553_RS01465;product=minor capsid protein;protein_id=WP_001829490.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	135649	135840	.	+	.	ID=gene-CP553_RS01470;Name=CP553_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01470;old_locus_tag=CP553_01550
NZ_PCFD01000002.1	Protein Homology	CDS	135649	135840	.	+	0	ID=cds-WP_002439593.1;Parent=gene-CP553_RS01470;Dbxref=GenBank:WP_002439593.1;Name=WP_002439593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113798.1;locus_tag=CP553_RS01470;product=hypothetical protein;protein_id=WP_002439593.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	pseudogene	136038	136589	.	+	.	ID=gene-CP553_RS12725;Name=CP553_RS12725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12725;pseudo=true
NZ_PCFD01000002.1	Protein Homology	CDS	136038	136589	.	+	0	ID=cds-CP553_RS12725;Parent=gene-CP553_RS12725;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025623.6;locus_tag=CP553_RS12725;product=DUF4355 domain-containing protein;pseudo=true;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	136840	137523	.	-	.	ID=gene-CP553_RS01485;Name=CP553_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01485;old_locus_tag=CP553_01565
NZ_PCFD01000002.1	Protein Homology	CDS	136840	137523	.	-	0	ID=cds-WP_001829493.1;Parent=gene-CP553_RS01485;Dbxref=GenBank:WP_001829493.1;Name=WP_001829493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473553.1;locus_tag=CP553_RS01485;product=Ltp family lipoprotein;protein_id=WP_001829493.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	137593	138618	.	-	.	ID=gene-CP553_RS01490;Name=CP553_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01490;old_locus_tag=CP553_01570
NZ_PCFD01000002.1	Protein Homology	CDS	137593	138618	.	-	0	ID=cds-WP_002456217.1;Parent=gene-CP553_RS01490;Dbxref=GenBank:WP_002456217.1;Name=WP_002456217.1;Ontology_term=GO:0006567,GO:0004793;gbkey=CDS;go_function=threonine aldolase activity|0004793||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499838.1;locus_tag=CP553_RS01490;product=threonine aldolase family protein;protein_id=WP_002456217.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	138932	139129	.	+	.	ID=gene-CP553_RS01495;Name=CP553_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01495;old_locus_tag=CP553_01575
NZ_PCFD01000002.1	Protein Homology	CDS	138932	139129	.	+	0	ID=cds-WP_001829481.1;Parent=gene-CP553_RS01495;Dbxref=GenBank:WP_001829481.1;Name=WP_001829481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829481.1;locus_tag=CP553_RS01495;product=hypothetical protein;protein_id=WP_001829481.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	139187	140659	.	+	.	ID=gene-CP553_RS01500;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CP553_RS01500;old_locus_tag=CP553_01580
NZ_PCFD01000002.1	Protein Homology	CDS	139187	140659	.	+	0	ID=cds-WP_001829523.1;Parent=gene-CP553_RS01500;Dbxref=GenBank:WP_001829523.1;Name=WP_001829523.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505271.1;locus_tag=CP553_RS01500;product=cardiolipin synthase;protein_id=WP_001829523.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	pseudogene	140837	141707	.	+	.	ID=gene-CP553_RS01505;Name=CP553_RS01505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS01505;old_locus_tag=CP553_01585;pseudo=true
NZ_PCFD01000002.1	Protein Homology	CDS	140837	141707	.	+	0	ID=cds-CP553_RS01505;Parent=gene-CP553_RS01505;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368563.1;locus_tag=CP553_RS01505;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	141710	142441	.	+	.	ID=gene-CP553_RS01510;Name=CP553_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01510;old_locus_tag=CP553_01590
NZ_PCFD01000002.1	Protein Homology	CDS	141710	142441	.	+	0	ID=cds-WP_002456215.1;Parent=gene-CP553_RS01510;Dbxref=GenBank:WP_002456215.1;Name=WP_002456215.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020365585.1;locus_tag=CP553_RS01510;product=ABC transporter permease;protein_id=WP_002456215.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	142441	143535	.	+	.	ID=gene-CP553_RS01515;Name=CP553_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01515;old_locus_tag=CP553_01595
NZ_PCFD01000002.1	Protein Homology	CDS	142441	143535	.	+	0	ID=cds-WP_002439609.1;Parent=gene-CP553_RS01515;Dbxref=GenBank:WP_002439609.1;Name=WP_002439609.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476684.1;locus_tag=CP553_RS01515;product=sensor histidine kinase;protein_id=WP_002439609.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	143532	144134	.	+	.	ID=gene-CP553_RS01520;Name=CP553_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01520;old_locus_tag=CP553_01600
NZ_PCFD01000002.1	Protein Homology	CDS	143532	144134	.	+	0	ID=cds-WP_064635270.1;Parent=gene-CP553_RS01520;Dbxref=GenBank:WP_064635270.1;Name=WP_064635270.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439610.1;locus_tag=CP553_RS01520;product=response regulator transcription factor;protein_id=WP_064635270.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	144303	144491	.	-	.	ID=gene-CP553_RS01525;Name=CP553_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01525;old_locus_tag=CP553_01605
NZ_PCFD01000002.1	Protein Homology	CDS	144303	144491	.	-	0	ID=cds-WP_001829458.1;Parent=gene-CP553_RS01525;Dbxref=GenBank:WP_001829458.1;Name=WP_001829458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829458.1;locus_tag=CP553_RS01525;product=membrane protein;protein_id=WP_001829458.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	gene	144656	145192	.	+	.	ID=gene-CP553_RS01530;Name=nucI;gbkey=Gene;gene=nucI;gene_biotype=protein_coding;locus_tag=CP553_RS01530;old_locus_tag=CP553_01610
NZ_PCFD01000002.1	Protein Homology	CDS	144656	145192	.	+	0	ID=cds-WP_002468906.1;Parent=gene-CP553_RS01530;Dbxref=GenBank:WP_002468906.1;Name=WP_002468906.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;gene=nucI;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500838.1;locus_tag=CP553_RS01530;product=thermonuclease NucI;protein_id=WP_002468906.1;transl_table=11
NZ_PCFD01000002.1	RefSeq	pseudogene	145682	145867	.	+	.	ID=gene-CP553_RS13050;Name=CP553_RS13050;end_range=145867,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS13050;partial=true;pseudo=true;start_range=.,145682
NZ_PCFD01000002.1	Protein Homology	CDS	145682	145867	.	+	0	ID=cds-CP553_RS13050;Parent=gene-CP553_RS13050;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=145867,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275504.1;locus_tag=CP553_RS13050;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,145682;transl_table=11
##sequence-region NZ_PCFD01000003.1 1 139709
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000003.1	RefSeq	region	1	139709	.	+	.	ID=NZ_PCFD01000003.1:1..139709;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000003.1	RefSeq	gene	335	952	.	+	.	ID=gene-CP553_RS01540;Name=CP553_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01540;old_locus_tag=CP553_01620
NZ_PCFD01000003.1	Protein Homology	CDS	335	952	.	+	0	ID=cds-WP_002457534.1;Parent=gene-CP553_RS01540;Dbxref=GenBank:WP_002457534.1;Name=WP_002457534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499228.1;locus_tag=CP553_RS01540;product=DUF47 domain-containing protein;protein_id=WP_002457534.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	967	1977	.	+	.	ID=gene-CP553_RS01545;Name=CP553_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01545;old_locus_tag=CP553_01625
NZ_PCFD01000003.1	Protein Homology	CDS	967	1977	.	+	0	ID=cds-WP_001832181.1;Parent=gene-CP553_RS01545;Dbxref=GenBank:WP_001832181.1;Name=WP_001832181.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500449.1;locus_tag=CP553_RS01545;product=inorganic phosphate transporter;protein_id=WP_001832181.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	2170	2970	.	-	.	ID=gene-CP553_RS01550;Name=CP553_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01550;old_locus_tag=CP553_01630
NZ_PCFD01000003.1	Protein Homology	CDS	2170	2970	.	-	0	ID=cds-WP_001832086.1;Parent=gene-CP553_RS01550;Dbxref=GenBank:WP_001832086.1;Name=WP_001832086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499230.1;locus_tag=CP553_RS01550;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_001832086.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	3381	4040	.	+	.	ID=gene-CP553_RS01555;Name=CP553_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01555;old_locus_tag=CP553_01635
NZ_PCFD01000003.1	Protein Homology	CDS	3381	4040	.	+	0	ID=cds-WP_001832176.1;Parent=gene-CP553_RS01555;Dbxref=GenBank:WP_001832176.1;Name=WP_001832176.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493261.1;locus_tag=CP553_RS01555;product=Bax inhibitor-1/YccA family protein;protein_id=WP_001832176.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	4303	6477	.	+	.	ID=gene-CP553_RS01560;Name=CP553_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01560;old_locus_tag=CP553_01640
NZ_PCFD01000003.1	Protein Homology	CDS	4303	6477	.	+	0	ID=cds-WP_002438836.1;Parent=gene-CP553_RS01560;Dbxref=GenBank:WP_002438836.1;Name=WP_002438836.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113883.1;locus_tag=CP553_RS01560;product=helix-turn-helix transcriptional regulator;protein_id=WP_002438836.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	6592	6951	.	+	.	ID=gene-CP553_RS01565;Name=CP553_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01565;old_locus_tag=CP553_01645
NZ_PCFD01000003.1	Protein Homology	CDS	6592	6951	.	+	0	ID=cds-WP_002455993.1;Parent=gene-CP553_RS01565;Dbxref=GenBank:WP_002455993.1;Name=WP_002455993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455993.1;locus_tag=CP553_RS01565;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_002455993.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	7204	7920	.	+	.	ID=gene-CP553_RS01570;Name=CP553_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01570;old_locus_tag=CP553_01650
NZ_PCFD01000003.1	Protein Homology	CDS	7204	7920	.	+	0	ID=cds-WP_001832120.1;Parent=gene-CP553_RS01570;Dbxref=GenBank:WP_001832120.1;Name=WP_001832120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499234.1;locus_tag=CP553_RS01570;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_001832120.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	7920	8396	.	+	.	ID=gene-CP553_RS01575;Name=CP553_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01575;old_locus_tag=CP553_01655
NZ_PCFD01000003.1	Protein Homology	CDS	7920	8396	.	+	0	ID=cds-WP_001832058.1;Parent=gene-CP553_RS01575;Dbxref=GenBank:WP_001832058.1;Name=WP_001832058.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832058.1;locus_tag=CP553_RS01575;product=cupin domain-containing protein;protein_id=WP_001832058.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	8648	9322	.	-	.	ID=gene-CP553_RS01580;Name=scdA;gbkey=Gene;gene=scdA;gene_biotype=protein_coding;locus_tag=CP553_RS01580;old_locus_tag=CP553_01660
NZ_PCFD01000003.1	Protein Homology	CDS	8648	9322	.	-	0	ID=cds-WP_001832101.1;Parent=gene-CP553_RS01580;Dbxref=GenBank:WP_001832101.1;Name=WP_001832101.1;gbkey=CDS;gene=scdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503062.1;locus_tag=CP553_RS01580;product=iron-sulfur cluster repair di-iron protein ScdA;protein_id=WP_001832101.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	9494	10639	.	+	.	ID=gene-CP553_RS01585;Name=CP553_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01585;old_locus_tag=CP553_01665
NZ_PCFD01000003.1	Protein Homology	CDS	9494	10639	.	+	0	ID=cds-WP_001832143.1;Parent=gene-CP553_RS01585;Dbxref=GenBank:WP_001832143.1;Name=WP_001832143.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457528.1;locus_tag=CP553_RS01585;product=globin domain-containing protein;protein_id=WP_001832143.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	10659	10844	.	+	.	ID=gene-CP553_RS01590;Name=CP553_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01590;old_locus_tag=CP553_01670
NZ_PCFD01000003.1	Protein Homology	CDS	10659	10844	.	+	0	ID=cds-WP_001832064.1;Parent=gene-CP553_RS01590;Dbxref=GenBank:WP_001832064.1;Name=WP_001832064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499630.1;locus_tag=CP553_RS01590;product=hypothetical protein;protein_id=WP_001832064.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	11133	11726	.	+	.	ID=gene-CP553_RS01595;Name=CP553_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01595;old_locus_tag=CP553_01675
NZ_PCFD01000003.1	Protein Homology	CDS	11133	11726	.	+	0	ID=cds-WP_001832140.1;Parent=gene-CP553_RS01595;Dbxref=GenBank:WP_001832140.1;Name=WP_001832140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457526.1;locus_tag=CP553_RS01595;product=DUF402 domain-containing protein;protein_id=WP_001832140.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	11807	12661	.	+	.	ID=gene-CP553_RS01600;Name=CP553_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01600;old_locus_tag=CP553_01680
NZ_PCFD01000003.1	Protein Homology	CDS	11807	12661	.	+	0	ID=cds-WP_001832044.1;Parent=gene-CP553_RS01600;Dbxref=GenBank:WP_001832044.1;Name=WP_001832044.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930914.1;locus_tag=CP553_RS01600;product=LysR family transcriptional regulator;protein_id=WP_001832044.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	12719	13927	.	+	.	ID=gene-CP553_RS01605;Name=CP553_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01605;old_locus_tag=CP553_01685
NZ_PCFD01000003.1	Protein Homology	CDS	12719	13927	.	+	0	ID=cds-WP_001832093.1;Parent=gene-CP553_RS01605;Dbxref=GenBank:WP_001832093.1;Name=WP_001832093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832093.1;locus_tag=CP553_RS01605;product=sugar efflux transporter;protein_id=WP_001832093.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	13934	14422	.	+	.	ID=gene-CP553_RS01610;Name=CP553_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01610;old_locus_tag=CP553_01690
NZ_PCFD01000003.1	Protein Homology	CDS	13934	14422	.	+	0	ID=cds-WP_001832028.1;Parent=gene-CP553_RS01610;Dbxref=GenBank:WP_001832028.1;Name=WP_001832028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501023.1;locus_tag=CP553_RS01610;product=DUF456 domain-containing protein;protein_id=WP_001832028.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	14478	15167	.	-	.	ID=gene-CP553_RS01615;Name=CP553_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01615;old_locus_tag=CP553_01695
NZ_PCFD01000003.1	Protein Homology	CDS	14478	15167	.	-	0	ID=cds-WP_001832056.1;Parent=gene-CP553_RS01615;Dbxref=GenBank:WP_001832056.1;Name=WP_001832056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457522.1;locus_tag=CP553_RS01615;product=DUF1129 family protein;protein_id=WP_001832056.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	15606	16028	.	+	.	ID=gene-CP553_RS01620;Name=CP553_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01620;old_locus_tag=CP553_01700
NZ_PCFD01000003.1	Protein Homology	CDS	15606	16028	.	+	0	ID=cds-WP_001832142.1;Parent=gene-CP553_RS01620;Dbxref=GenBank:WP_001832142.1;Name=WP_001832142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489211.1;locus_tag=CP553_RS01620;product=SA0632 family lipoprotein;protein_id=WP_001832142.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	16160	16456	.	+	.	ID=gene-CP553_RS01625;Name=CP553_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01625;old_locus_tag=CP553_01705
NZ_PCFD01000003.1	Protein Homology	CDS	16160	16456	.	+	0	ID=cds-WP_001832178.1;Parent=gene-CP553_RS01625;Dbxref=GenBank:WP_001832178.1;Name=WP_001832178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445863.1;locus_tag=CP553_RS01625;product=hypothetical protein;protein_id=WP_001832178.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	16582	17130	.	+	.	ID=gene-CP553_RS01630;Name=CP553_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01630;old_locus_tag=CP553_01710
NZ_PCFD01000003.1	Protein Homology	CDS	16582	17130	.	+	0	ID=cds-WP_001832026.1;Parent=gene-CP553_RS01630;Dbxref=GenBank:WP_001832026.1;Name=WP_001832026.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361067.1;locus_tag=CP553_RS01630;product=GNAT family N-acetyltransferase;protein_id=WP_001832026.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	17429	17995	.	-	.	ID=gene-CP553_RS01635;Name=CP553_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01635;old_locus_tag=CP553_01715
NZ_PCFD01000003.1	Protein Homology	CDS	17429	17995	.	-	0	ID=cds-WP_001832158.1;Parent=gene-CP553_RS01635;Dbxref=GenBank:WP_001832158.1;Name=WP_001832158.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499247.1;locus_tag=CP553_RS01635;product=TIGR00730 family Rossman fold protein;protein_id=WP_001832158.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	18006	18455	.	-	.	ID=gene-CP553_RS01640;Name=CP553_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01640;old_locus_tag=CP553_01720
NZ_PCFD01000003.1	Protein Homology	CDS	18006	18455	.	-	0	ID=cds-WP_002438849.1;Parent=gene-CP553_RS01640;Dbxref=GenBank:WP_002438849.1;Name=WP_002438849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438849.1;locus_tag=CP553_RS01640;product=YaiI/YqxD family protein;protein_id=WP_002438849.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	18458	19138	.	-	.	ID=gene-CP553_RS01645;Name=CP553_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01645;old_locus_tag=CP553_01725
NZ_PCFD01000003.1	Protein Homology	CDS	18458	19138	.	-	0	ID=cds-WP_001832119.1;Parent=gene-CP553_RS01645;Dbxref=GenBank:WP_001832119.1;Name=WP_001832119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489208.1;locus_tag=CP553_RS01645;product=hypothetical protein;protein_id=WP_001832119.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	19335	19799	.	+	.	ID=gene-CP553_RS01650;Name=CP553_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01650;old_locus_tag=CP553_01730
NZ_PCFD01000003.1	Protein Homology	CDS	19335	19799	.	+	0	ID=cds-WP_001832179.1;Parent=gene-CP553_RS01650;Dbxref=GenBank:WP_001832179.1;Name=WP_001832179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493269.1;locus_tag=CP553_RS01650;product=GyrI-like domain-containing protein;protein_id=WP_001832179.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	20082	20954	.	-	.	ID=gene-CP553_RS01655;Name=CP553_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01655;old_locus_tag=CP553_01735
NZ_PCFD01000003.1	Protein Homology	CDS	20082	20954	.	-	0	ID=cds-WP_001832082.1;Parent=gene-CP553_RS01655;Dbxref=GenBank:WP_001832082.1;Name=WP_001832082.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499250.1;locus_tag=CP553_RS01655;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001832082.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	21165	22799	.	+	.	ID=gene-CP553_RS01660;Name=CP553_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01660;old_locus_tag=CP553_01740
NZ_PCFD01000003.1	Protein Homology	CDS	21165	22799	.	+	0	ID=cds-WP_002455988.1;Parent=gene-CP553_RS01660;Dbxref=GenBank:WP_002455988.1;Name=WP_002455988.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464495.1;locus_tag=CP553_RS01660;product=ABC transporter ATP-binding protein/permease;protein_id=WP_002455988.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	22796	24490	.	+	.	ID=gene-CP553_RS01665;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=CP553_RS01665;old_locus_tag=CP553_01745
NZ_PCFD01000003.1	Protein Homology	CDS	22796	24490	.	+	0	ID=cds-WP_002438857.1;Parent=gene-CP553_RS01665;Dbxref=GenBank:WP_002438857.1;Name=WP_002438857.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360272.1;locus_tag=CP553_RS01665;product=thiol reductant ABC exporter subunit CydC;protein_id=WP_002438857.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	24731	25174	.	-	.	ID=gene-CP553_RS01670;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=CP553_RS01670;old_locus_tag=CP553_01750
NZ_PCFD01000003.1	Protein Homology	CDS	24731	25174	.	-	0	ID=cds-WP_001830335.1;Parent=gene-CP553_RS01670;Dbxref=GenBank:WP_001830335.1;Name=WP_001830335.1;gbkey=CDS;gene=mgrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499253.1;locus_tag=CP553_RS01670;product=HTH-type transcriptional regulator MgrA;protein_id=WP_001830335.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	25396	26322	.	+	.	ID=gene-CP553_RS01675;Name=CP553_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01675;old_locus_tag=CP553_01760
NZ_PCFD01000003.1	Protein Homology	CDS	25396	26322	.	+	0	ID=cds-WP_001830339.1;Parent=gene-CP553_RS01675;Dbxref=GenBank:WP_001830339.1;Name=WP_001830339.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476388.1;locus_tag=CP553_RS01675;product=CobW family GTP-binding protein;protein_id=WP_001830339.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	26344	26637	.	+	.	ID=gene-CP553_RS01680;Name=CP553_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01680;old_locus_tag=CP553_01765
NZ_PCFD01000003.1	Protein Homology	CDS	26344	26637	.	+	0	ID=cds-WP_001830319.1;Parent=gene-CP553_RS01680;Dbxref=GenBank:WP_001830319.1;Name=WP_001830319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830319.1;locus_tag=CP553_RS01680;product=hypothetical protein;protein_id=WP_001830319.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	26766	27707	.	+	.	ID=gene-CP553_RS01685;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=CP553_RS01685;old_locus_tag=CP553_01770
NZ_PCFD01000003.1	Protein Homology	CDS	26766	27707	.	+	0	ID=cds-WP_002438862.1;Parent=gene-CP553_RS01685;Dbxref=GenBank:WP_002438862.1;Name=WP_002438862.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362622.1;locus_tag=CP553_RS01685;product=malate dehydrogenase;protein_id=WP_002438862.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	27841	29397	.	+	.	ID=gene-CP553_RS01690;Name=CP553_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01690;old_locus_tag=CP553_01775
NZ_PCFD01000003.1	Protein Homology	CDS	27841	29397	.	+	0	ID=cds-WP_002438863.1;Parent=gene-CP553_RS01690;Dbxref=GenBank:WP_002438863.1;Name=WP_002438863.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505661.1;locus_tag=CP553_RS01690;product=SLC13 family permease;protein_id=WP_002438863.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	29594	30967	.	+	.	ID=gene-CP553_RS01695;Name=CP553_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01695;old_locus_tag=CP553_01780
NZ_PCFD01000003.1	Protein Homology	CDS	29594	30967	.	+	0	ID=cds-WP_001830324.1;Parent=gene-CP553_RS01695;Dbxref=GenBank:WP_001830324.1;Name=WP_001830324.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495262.1;locus_tag=CP553_RS01695;product=cryptochrome/photolyase family protein;protein_id=WP_001830324.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	31017	31286	.	-	.	ID=gene-CP553_RS01700;Name=CP553_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01700;old_locus_tag=CP553_01785
NZ_PCFD01000003.1	Protein Homology	CDS	31017	31286	.	-	0	ID=cds-WP_002438864.1;Parent=gene-CP553_RS01700;Dbxref=GenBank:WP_002438864.1;Name=WP_002438864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503066.1;locus_tag=CP553_RS01700;product=hypothetical protein;protein_id=WP_002438864.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	31283	31900	.	-	.	ID=gene-CP553_RS01705;Name=CP553_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01705;old_locus_tag=CP553_01790
NZ_PCFD01000003.1	Protein Homology	CDS	31283	31900	.	-	0	ID=cds-WP_002438866.1;Parent=gene-CP553_RS01705;Dbxref=GenBank:WP_002438866.1;Name=WP_002438866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464501.1;locus_tag=CP553_RS01705;product=DUF1361 domain-containing protein;protein_id=WP_002438866.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	32310	33473	.	+	.	ID=gene-CP553_RS01710;Name=norA;gbkey=Gene;gene=norA;gene_biotype=protein_coding;locus_tag=CP553_RS01710;old_locus_tag=CP553_01795
NZ_PCFD01000003.1	Protein Homology	CDS	32310	33473	.	+	0	ID=cds-WP_001830321.1;Parent=gene-CP553_RS01710;Dbxref=GenBank:WP_001830321.1;Name=WP_001830321.1;gbkey=CDS;gene=norA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501137.1;locus_tag=CP553_RS01710;product=multidrug efflux MFS transporter NorA;protein_id=WP_001830321.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	33795	34265	.	+	.	ID=gene-CP553_RS01715;Name=CP553_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01715;old_locus_tag=CP553_01800
NZ_PCFD01000003.1	Protein Homology	CDS	33795	34265	.	+	0	ID=cds-WP_001830333.1;Parent=gene-CP553_RS01715;Dbxref=GenBank:WP_001830333.1;Name=WP_001830333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499039.1;locus_tag=CP553_RS01715;product=hypothetical protein;protein_id=WP_001830333.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	34379	34861	.	+	.	ID=gene-CP553_RS01720;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=CP553_RS01720;old_locus_tag=CP553_01805
NZ_PCFD01000003.1	Protein Homology	CDS	34379	34861	.	+	0	ID=cds-WP_001830357.1;Parent=gene-CP553_RS01720;Dbxref=GenBank:WP_001830357.1;Name=WP_001830357.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501136.1;locus_tag=CP553_RS01720;product=Cys-tRNA(Pro) deacylase;protein_id=WP_001830357.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	35092	35850	.	+	.	ID=gene-CP553_RS01725;Name=CP553_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01725;old_locus_tag=CP553_01815
NZ_PCFD01000003.1	Protein Homology	CDS	35092	35850	.	+	0	ID=cds-WP_002438877.1;Parent=gene-CP553_RS01725;Dbxref=GenBank:WP_002438877.1;Name=WP_002438877.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493521.1;locus_tag=CP553_RS01725;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002438877.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	35847	36767	.	+	.	ID=gene-CP553_RS01730;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=CP553_RS01730;old_locus_tag=CP553_01820
NZ_PCFD01000003.1	Protein Homology	CDS	35847	36767	.	+	0	ID=cds-WP_002438878.1;Parent=gene-CP553_RS01730;Dbxref=GenBank:WP_002438878.1;Name=WP_002438878.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499266.1;locus_tag=CP553_RS01730;product=1-phosphofructokinase;protein_id=WP_002438878.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	36773	38725	.	+	.	ID=gene-CP553_RS01735;Name=CP553_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01735;old_locus_tag=CP553_01825
NZ_PCFD01000003.1	Protein Homology	CDS	36773	38725	.	+	0	ID=cds-WP_002456133.1;Parent=gene-CP553_RS01735;Dbxref=GenBank:WP_002456133.1;Name=WP_002456133.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499267.1;locus_tag=CP553_RS01735;product=PTS fructose transporter subunit IIABC;protein_id=WP_002456133.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	39099	40271	.	+	.	ID=gene-CP553_RS01740;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=CP553_RS01740;old_locus_tag=CP553_01830
NZ_PCFD01000003.1	Protein Homology	CDS	39099	40271	.	+	0	ID=cds-WP_001830343.1;Parent=gene-CP553_RS01740;Dbxref=GenBank:WP_001830343.1;Name=WP_001830343.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496166.1;locus_tag=CP553_RS01740;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_001830343.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	40508	41857	.	+	.	ID=gene-CP553_RS01745;Name=CP553_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01745;old_locus_tag=CP553_01835
NZ_PCFD01000003.1	Protein Homology	CDS	40508	41857	.	+	0	ID=cds-WP_002438880.1;Parent=gene-CP553_RS01745;Dbxref=GenBank:WP_002438880.1;Name=WP_002438880.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499270.1;locus_tag=CP553_RS01745;product=hemolysin family protein;protein_id=WP_002438880.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	42072	42911	.	+	.	ID=gene-CP553_RS01750;Name=CP553_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01750;old_locus_tag=CP553_01840
NZ_PCFD01000003.1	Protein Homology	CDS	42072	42911	.	+	0	ID=cds-WP_001830355.1;Parent=gene-CP553_RS01750;Dbxref=GenBank:WP_001830355.1;Name=WP_001830355.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499271.1;locus_tag=CP553_RS01750;product=aldo/keto reductase;protein_id=WP_001830355.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	43114	44220	.	+	.	ID=gene-CP553_RS01755;Name=CP553_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01755;old_locus_tag=CP553_01845
NZ_PCFD01000003.1	Protein Homology	CDS	43114	44220	.	+	0	ID=cds-WP_001830351.1;Parent=gene-CP553_RS01755;Dbxref=GenBank:WP_001830351.1;Name=WP_001830351.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457627.1;locus_tag=CP553_RS01755;product=glycosyltransferase family 2 protein;protein_id=WP_001830351.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	44290	45342	.	-	.	ID=gene-CP553_RS01760;Name=CP553_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01760;old_locus_tag=CP553_01850
NZ_PCFD01000003.1	Protein Homology	CDS	44290	45342	.	-	0	ID=cds-WP_025987135.1;Parent=gene-CP553_RS01760;Dbxref=GenBank:WP_025987135.1;Name=WP_025987135.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433394.1;locus_tag=CP553_RS01760;product=sensor histidine kinase;protein_id=WP_025987135.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	45345	46034	.	-	.	ID=gene-CP553_RS01765;Name=saeR;gbkey=Gene;gene=saeR;gene_biotype=protein_coding;locus_tag=CP553_RS01765;old_locus_tag=CP553_01855
NZ_PCFD01000003.1	Protein Homology	CDS	45345	46034	.	-	0	ID=cds-WP_001830352.1;Parent=gene-CP553_RS01765;Dbxref=GenBank:WP_001830352.1;Name=WP_001830352.1;gbkey=CDS;gene=saeR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499274.1;locus_tag=CP553_RS01765;product=response regulator transcription factor SaeR;protein_id=WP_001830352.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	46009	46482	.	-	.	ID=gene-CP553_RS01770;Name=CP553_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01770;old_locus_tag=CP553_01860
NZ_PCFD01000003.1	Protein Homology	CDS	46009	46482	.	-	0	ID=cds-WP_001830332.1;Parent=gene-CP553_RS01770;Dbxref=GenBank:WP_001830332.1;Name=WP_001830332.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494806.1;locus_tag=CP553_RS01770;product=DoxX family protein;protein_id=WP_001830332.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	46533	46970	.	-	.	ID=gene-CP553_RS01775;Name=CP553_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01775;old_locus_tag=CP553_01865
NZ_PCFD01000003.1	Protein Homology	CDS	46533	46970	.	-	0	ID=cds-WP_001830329.1;Parent=gene-CP553_RS01775;Dbxref=GenBank:WP_001830329.1;Name=WP_001830329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499276.1;locus_tag=CP553_RS01775;product=DM13 domain-containing protein;protein_id=WP_001830329.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	47566	47721	.	-	.	ID=gene-CP553_RS01780;Name=CP553_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01780
NZ_PCFD01000003.1	GeneMarkS-2+	CDS	47566	47721	.	-	0	ID=cds-WP_002485887.1;Parent=gene-CP553_RS01780;Dbxref=GenBank:WP_002485887.1;Name=WP_002485887.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS01780;product=hypothetical protein;protein_id=WP_002485887.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	48071	48670	.	-	.	ID=gene-CP553_RS01785;Name=CP553_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01785;old_locus_tag=CP553_01875
NZ_PCFD01000003.1	Protein Homology	CDS	48071	48670	.	-	0	ID=cds-WP_001830331.1;Parent=gene-CP553_RS01785;Dbxref=GenBank:WP_001830331.1;Name=WP_001830331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491416.1;locus_tag=CP553_RS01785;product=hypothetical protein;protein_id=WP_001830331.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	48773	49486	.	-	.	ID=gene-CP553_RS01790;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=CP553_RS01790;old_locus_tag=CP553_01880
NZ_PCFD01000003.1	Protein Homology	CDS	48773	49486	.	-	0	ID=cds-WP_001830330.1;Parent=gene-CP553_RS01790;Dbxref=GenBank:WP_001830330.1;Name=WP_001830330.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499278.1;locus_tag=CP553_RS01790;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001830330.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	49487	49906	.	-	.	ID=gene-CP553_RS01795;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=CP553_RS01795;old_locus_tag=CP553_01885
NZ_PCFD01000003.1	Protein Homology	CDS	49487	49906	.	-	0	ID=cds-WP_001830341.1;Parent=gene-CP553_RS01795;Dbxref=GenBank:WP_001830341.1;Name=WP_001830341.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830341.1;locus_tag=CP553_RS01795;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_001830341.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	49911	50582	.	-	.	ID=gene-CP553_RS01800;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=CP553_RS01800;old_locus_tag=CP553_01890
NZ_PCFD01000003.1	Protein Homology	CDS	49911	50582	.	-	0	ID=cds-WP_001830328.1;Parent=gene-CP553_RS01800;Dbxref=GenBank:WP_001830328.1;Name=WP_001830328.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830328.1;locus_tag=CP553_RS01800;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_001830328.1;transl_table=11
NZ_PCFD01000003.1	cmsearch	riboswitch	50714	50760	.	-	.	ID=id-NZ_PCFD01000003.1:50714..50760;Dbxref=RFAM:RF00522;Note=PreQ1 riboswitch class I;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000003.1	RefSeq	gene	50879	51466	.	+	.	ID=gene-CP553_RS01805;Name=CP553_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01805;old_locus_tag=CP553_01895
NZ_PCFD01000003.1	Protein Homology	CDS	50879	51466	.	+	0	ID=cds-WP_001830349.1;Parent=gene-CP553_RS01805;Dbxref=GenBank:WP_001830349.1;Name=WP_001830349.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457621.1;locus_tag=CP553_RS01805;product=anthranilate synthase component II;protein_id=WP_001830349.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	51456	52607	.	+	.	ID=gene-CP553_RS01810;Name=CP553_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01810;old_locus_tag=CP553_01900
NZ_PCFD01000003.1	Protein Homology	CDS	51456	52607	.	+	0	ID=cds-WP_001830323.1;Parent=gene-CP553_RS01810;Dbxref=GenBank:WP_001830323.1;Name=WP_001830323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502021.1;locus_tag=CP553_RS01810;product=chorismate-binding protein;protein_id=WP_001830323.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	52609	53217	.	+	.	ID=gene-CP553_RS01815;Name=CP553_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01815;old_locus_tag=CP553_01905
NZ_PCFD01000003.1	Protein Homology	CDS	52609	53217	.	+	0	ID=cds-WP_001830316.1;Parent=gene-CP553_RS01815;Dbxref=GenBank:WP_001830316.1;Name=WP_001830316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830316.1;locus_tag=CP553_RS01815;product=aminotransferase class IV;protein_id=WP_001830316.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	53266	53472	.	+	.	ID=gene-CP553_RS01820;Name=CP553_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01820;old_locus_tag=CP553_01910
NZ_PCFD01000003.1	Protein Homology	CDS	53266	53472	.	+	0	ID=cds-WP_001830353.1;Parent=gene-CP553_RS01820;Dbxref=GenBank:WP_001830353.1;Name=WP_001830353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830353.1;locus_tag=CP553_RS01820;product=hypothetical protein;protein_id=WP_001830353.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	53491	54222	.	+	.	ID=gene-CP553_RS01825;Name=CP553_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01825;old_locus_tag=CP553_01915
NZ_PCFD01000003.1	Protein Homology	CDS	53491	54222	.	+	0	ID=cds-WP_116842978.1;Parent=gene-CP553_RS01825;Dbxref=GenBank:WP_116842978.1;Name=WP_116842978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490779.1;locus_tag=CP553_RS01825;product=allophanate hydrolase subunit 1;protein_id=WP_116842978.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	54210	55214	.	+	.	ID=gene-CP553_RS01830;Name=CP553_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01830;old_locus_tag=CP553_01920
NZ_PCFD01000003.1	Protein Homology	CDS	54210	55214	.	+	0	ID=cds-WP_002438888.1;Parent=gene-CP553_RS01830;Dbxref=GenBank:WP_002438888.1;Name=WP_002438888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499286.1;locus_tag=CP553_RS01830;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_002438888.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	55766	57706	.	+	.	ID=gene-CP553_RS01835;Name=ltaS;gbkey=Gene;gene=ltaS;gene_biotype=protein_coding;locus_tag=CP553_RS01835;old_locus_tag=CP553_01925
NZ_PCFD01000003.1	Protein Homology	CDS	55766	57706	.	+	0	ID=cds-WP_001830354.1;Parent=gene-CP553_RS01835;Dbxref=GenBank:WP_001830354.1;Name=WP_001830354.1;gbkey=CDS;gene=ltaS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499287.1;locus_tag=CP553_RS01835;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;protein_id=WP_001830354.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	pseudogene	58140	58322	.	+	.	ID=gene-CP553_RS01840;Name=CP553_RS01840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS01840;partial=true;pseudo=true;start_range=.,58140
NZ_PCFD01000003.1	Protein Homology	CDS	58140	58322	.	+	0	ID=cds-CP553_RS01840;Parent=gene-CP553_RS01840;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082549.1;locus_tag=CP553_RS01840;partial=true;product=hypothetical protein;pseudo=true;start_range=.,58140;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	58599	59414	.	-	.	ID=gene-CP553_RS01845;Name=CP553_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01845;old_locus_tag=CP553_01930
NZ_PCFD01000003.1	Protein Homology	CDS	58599	59414	.	-	0	ID=cds-WP_001829605.1;Parent=gene-CP553_RS01845;Dbxref=GenBank:WP_001829605.1;Name=WP_001829605.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505461.1;locus_tag=CP553_RS01845;product=ZIP family metal transporter;protein_id=WP_001829605.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	59536	61425	.	+	.	ID=gene-CP553_RS01850;Name=CP553_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01850;old_locus_tag=CP553_01935
NZ_PCFD01000003.1	Protein Homology	CDS	59536	61425	.	+	0	ID=cds-WP_171004438.1;Parent=gene-CP553_RS01850;Dbxref=GenBank:WP_171004438.1;Name=WP_171004438.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433466.1;locus_tag=CP553_RS01850;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_171004438.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	61436	63217	.	+	.	ID=gene-CP553_RS01855;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=CP553_RS01855;old_locus_tag=CP553_01940
NZ_PCFD01000003.1	Protein Homology	CDS	61436	63217	.	+	0	ID=cds-WP_086886647.1;Parent=gene-CP553_RS01855;Dbxref=GenBank:WP_086886647.1;Name=WP_086886647.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499290.1;locus_tag=CP553_RS01855;product=DNA helicase RecQ;protein_id=WP_086886647.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	63417	64391	.	+	.	ID=gene-CP553_RS01860;Name=CP553_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01860;old_locus_tag=CP553_01945
NZ_PCFD01000003.1	Protein Homology	CDS	63417	64391	.	+	0	ID=cds-WP_002438891.1;Parent=gene-CP553_RS01860;Dbxref=GenBank:WP_002438891.1;Name=WP_002438891.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476180.1;locus_tag=CP553_RS01860;product=ABC transporter ATP-binding protein;protein_id=WP_002438891.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	64384	65898	.	+	.	ID=gene-CP553_RS01865;Name=CP553_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01865;old_locus_tag=CP553_01950
NZ_PCFD01000003.1	Protein Homology	CDS	64384	65898	.	+	0	ID=cds-WP_002438893.1;Parent=gene-CP553_RS01865;Dbxref=GenBank:WP_002438893.1;Name=WP_002438893.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499292.1;locus_tag=CP553_RS01865;product=ABC transporter permease/substrate-binding protein;protein_id=WP_002438893.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	66101	67156	.	+	.	ID=gene-CP553_RS01870;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=CP553_RS01870;old_locus_tag=CP553_01955
NZ_PCFD01000003.1	Protein Homology	CDS	66101	67156	.	+	0	ID=cds-WP_001829653.1;Parent=gene-CP553_RS01870;Dbxref=GenBank:WP_001829653.1;Name=WP_001829653.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113659.1;locus_tag=CP553_RS01870;product=histidinol-phosphate transaminase;protein_id=WP_001829653.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	67279	67818	.	+	.	ID=gene-CP553_RS01875;Name=CP553_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01875;old_locus_tag=CP553_01960
NZ_PCFD01000003.1	Protein Homology	CDS	67279	67818	.	+	0	ID=cds-WP_001832599.1;Parent=gene-CP553_RS01875;Dbxref=GenBank:WP_001832599.1;Name=WP_001832599.1;Ontology_term=GO:0009264,GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499294.1;locus_tag=CP553_RS01875;product=5' nucleotidase%2C NT5C type;protein_id=WP_001832599.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	67885	70494	.	-	.	ID=gene-CP553_RS01880;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=CP553_RS01880;old_locus_tag=CP553_01965
NZ_PCFD01000003.1	Protein Homology	CDS	67885	70494	.	-	0	ID=cds-WP_002456130.1;Parent=gene-CP553_RS01880;Dbxref=GenBank:WP_002456130.1;Name=WP_002456130.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445916.1;locus_tag=CP553_RS01880;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_002456130.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	70893	71816	.	-	.	ID=gene-CP553_RS01885;Name=CP553_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01885;old_locus_tag=CP553_01970
NZ_PCFD01000003.1	Protein Homology	CDS	70893	71816	.	-	0	ID=cds-WP_001829680.1;Parent=gene-CP553_RS01885;Dbxref=GenBank:WP_001829680.1;Name=WP_001829680.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468862.1;locus_tag=CP553_RS01885;product=diacylglycerol/lipid kinase family protein;protein_id=WP_001829680.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	72026	72187	.	-	.	ID=gene-CP553_RS01890;Name=CP553_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01890
NZ_PCFD01000003.1	GeneMarkS-2+	CDS	72026	72187	.	-	0	ID=cds-WP_001829650.1;Parent=gene-CP553_RS01890;Dbxref=GenBank:WP_001829650.1;Name=WP_001829650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS01890;product=hypothetical protein;protein_id=WP_001829650.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	72471	73976	.	-	.	ID=gene-CP553_RS01895;Name=CP553_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01895;old_locus_tag=CP553_01975
NZ_PCFD01000003.1	Protein Homology	CDS	72471	73976	.	-	0	ID=cds-WP_002438897.1;Parent=gene-CP553_RS01895;Dbxref=GenBank:WP_002438897.1;Name=WP_002438897.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457605.1;locus_tag=CP553_RS01895;product=peptide MFS transporter;protein_id=WP_002438897.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	74260	74760	.	-	.	ID=gene-CP553_RS01900;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=CP553_RS01900;old_locus_tag=CP553_01980
NZ_PCFD01000003.1	Protein Homology	CDS	74260	74760	.	-	0	ID=cds-WP_001832596.1;Parent=gene-CP553_RS01900;Dbxref=GenBank:WP_001832596.1;Name=WP_001832596.1;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499299.1;locus_tag=CP553_RS01900;product=preQ(1) synthase;protein_id=WP_001832596.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	74774	75649	.	-	.	ID=gene-CP553_RS01905;Name=CP553_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01905;old_locus_tag=CP553_01985
NZ_PCFD01000003.1	Protein Homology	CDS	74774	75649	.	-	0	ID=cds-WP_001829684.1;Parent=gene-CP553_RS01905;Dbxref=GenBank:WP_001829684.1;Name=WP_001829684.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445920.1;locus_tag=CP553_RS01905;product=DMT family transporter;protein_id=WP_001829684.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	76404	76802	.	+	.	ID=gene-CP553_RS01910;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=CP553_RS01910;old_locus_tag=CP553_01990
NZ_PCFD01000003.1	Protein Homology	CDS	76404	76802	.	+	0	ID=cds-WP_001829589.1;Parent=gene-CP553_RS01910;Dbxref=GenBank:WP_001829589.1;Name=WP_001829589.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483930.1;locus_tag=CP553_RS01910;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001829589.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	76765	78870	.	+	.	ID=gene-CP553_RS01915;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=CP553_RS01915;old_locus_tag=CP553_01995
NZ_PCFD01000003.1	Protein Homology	CDS	76765	78870	.	+	0	ID=cds-WP_001829582.1;Parent=gene-CP553_RS01915;Dbxref=GenBank:WP_001829582.1;Name=WP_001829582.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855513.1;locus_tag=CP553_RS01915;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001829582.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	78989	79957	.	+	.	ID=gene-CP553_RS01920;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=CP553_RS01920;old_locus_tag=CP553_02000
NZ_PCFD01000003.1	Protein Homology	CDS	78989	79957	.	+	0	ID=cds-WP_001829597.1;Parent=gene-CP553_RS01920;Dbxref=GenBank:WP_001829597.1;Name=WP_001829597.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491229.1;locus_tag=CP553_RS01920;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_001829597.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	79932	80195	.	+	.	ID=gene-CP553_RS01925;Name=CP553_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01925;old_locus_tag=CP553_02005
NZ_PCFD01000003.1	Protein Homology	CDS	79932	80195	.	+	0	ID=cds-WP_002438901.1;Parent=gene-CP553_RS01925;Dbxref=GenBank:WP_002438901.1;Name=WP_002438901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456931.1;locus_tag=CP553_RS01925;product=hypothetical protein;protein_id=WP_002438901.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	80211	81185	.	+	.	ID=gene-CP553_RS01930;Name=CP553_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01930;old_locus_tag=CP553_02010
NZ_PCFD01000003.1	Protein Homology	CDS	80211	81185	.	+	0	ID=cds-WP_002438902.1;Parent=gene-CP553_RS01930;Dbxref=GenBank:WP_002438902.1;Name=WP_002438902.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464606.1;locus_tag=CP553_RS01930;product=ABC transporter permease;protein_id=WP_002438902.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	81169	82128	.	+	.	ID=gene-CP553_RS01935;Name=CP553_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01935;old_locus_tag=CP553_02015
NZ_PCFD01000003.1	Protein Homology	CDS	81169	82128	.	+	0	ID=cds-WP_002438903.1;Parent=gene-CP553_RS01935;Dbxref=GenBank:WP_002438903.1;Name=WP_002438903.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491218.1;locus_tag=CP553_RS01935;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_002438903.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	82125	82904	.	+	.	ID=gene-CP553_RS01940;Name=CP553_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01940;old_locus_tag=CP553_02020
NZ_PCFD01000003.1	Protein Homology	CDS	82125	82904	.	+	0	ID=cds-WP_001829596.1;Parent=gene-CP553_RS01940;Dbxref=GenBank:WP_001829596.1;Name=WP_001829596.1;Ontology_term=GO:0006826,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496145.1;locus_tag=CP553_RS01940;product=iron ABC transporter ATP-binding protein;protein_id=WP_001829596.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	pseudogene	82983	84025	.	+	.	ID=gene-CP553_RS01945;Name=CP553_RS01945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS01945;old_locus_tag=CP553_02025;pseudo=true
NZ_PCFD01000003.1	Protein Homology	CDS	82983	84025	.	+	0	ID=cds-CP553_RS01945;Parent=gene-CP553_RS01945;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468875.1;locus_tag=CP553_RS01945;product=ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD;pseudo=true;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	84176	84490	.	-	.	ID=gene-CP553_RS01950;Name=CP553_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01950;old_locus_tag=CP553_02030
NZ_PCFD01000003.1	Protein Homology	CDS	84176	84490	.	-	0	ID=cds-WP_001829567.1;Parent=gene-CP553_RS01950;Dbxref=GenBank:WP_001829567.1;Name=WP_001829567.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445928.1;locus_tag=CP553_RS01950;product=CHY zinc finger protein;protein_id=WP_001829567.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	84512	85444	.	-	.	ID=gene-CP553_RS01955;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=CP553_RS01955;old_locus_tag=CP553_02035
NZ_PCFD01000003.1	Protein Homology	CDS	84512	85444	.	-	0	ID=cds-WP_001829600.1;Parent=gene-CP553_RS01955;Dbxref=GenBank:WP_001829600.1;Name=WP_001829600.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276415.1;locus_tag=CP553_RS01955;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001829600.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	85561	86088	.	-	.	ID=gene-CP553_RS01960;Name=CP553_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01960;old_locus_tag=CP553_02040
NZ_PCFD01000003.1	Protein Homology	CDS	85561	86088	.	-	0	ID=cds-WP_001829625.1;Parent=gene-CP553_RS01960;Dbxref=GenBank:WP_001829625.1;Name=WP_001829625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496142.1;locus_tag=CP553_RS01960;product=GrpB family protein;protein_id=WP_001829625.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	86205	87095	.	+	.	ID=gene-CP553_RS01965;Name=CP553_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01965;old_locus_tag=CP553_02045
NZ_PCFD01000003.1	Protein Homology	CDS	86205	87095	.	+	0	ID=cds-WP_001829568.1;Parent=gene-CP553_RS01965;Dbxref=GenBank:WP_001829568.1;Name=WP_001829568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829568.1;locus_tag=CP553_RS01965;product=EMYY motif lipoprotein;protein_id=WP_001829568.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	87244	87564	.	+	.	ID=gene-CP553_RS01970;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=CP553_RS01970;old_locus_tag=CP553_02050
NZ_PCFD01000003.1	Protein Homology	CDS	87244	87564	.	+	0	ID=cds-WP_001829675.1;Parent=gene-CP553_RS01970;Dbxref=GenBank:WP_001829675.1;Name=WP_001829675.1;Ontology_term=GO:0006790;gbkey=CDS;gene=ytxJ;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499314.1;locus_tag=CP553_RS01970;product=bacillithiol system redox-active protein YtxJ;protein_id=WP_001829675.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	87835	88965	.	+	.	ID=gene-CP553_RS01975;Name=CP553_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01975;old_locus_tag=CP553_02055
NZ_PCFD01000003.1	Protein Homology	CDS	87835	88965	.	+	0	ID=cds-WP_032604348.1;Parent=gene-CP553_RS01975;Dbxref=GenBank:WP_032604348.1;Name=WP_032604348.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470484.1;locus_tag=CP553_RS01975;product=glycerate kinase;protein_id=WP_032604348.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	89056	90294	.	-	.	ID=gene-CP553_RS01980;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=CP553_RS01980;old_locus_tag=CP553_02060
NZ_PCFD01000003.1	Protein Homology	CDS	89056	90294	.	-	0	ID=cds-WP_002438906.1;Parent=gene-CP553_RS01980;Dbxref=GenBank:WP_002438906.1;Name=WP_002438906.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468678.1;locus_tag=CP553_RS01980;product=peptidase T;protein_id=WP_002438906.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	90315	90809	.	-	.	ID=gene-CP553_RS01985;Name=CP553_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01985;old_locus_tag=CP553_02065
NZ_PCFD01000003.1	Protein Homology	CDS	90315	90809	.	-	0	ID=cds-WP_002438907.1;Parent=gene-CP553_RS01985;Dbxref=GenBank:WP_002438907.1;Name=WP_002438907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499317.1;locus_tag=CP553_RS01985;product=threonine/serine exporter family protein;protein_id=WP_002438907.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	90825	91586	.	-	.	ID=gene-CP553_RS01990;Name=CP553_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS01990;old_locus_tag=CP553_02070
NZ_PCFD01000003.1	Protein Homology	CDS	90825	91586	.	-	0	ID=cds-WP_001829644.1;Parent=gene-CP553_RS01990;Dbxref=GenBank:WP_001829644.1;Name=WP_001829644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499318.1;locus_tag=CP553_RS01990;product=threonine/serine exporter family protein;protein_id=WP_001829644.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	91781	92851	.	-	.	ID=gene-CP553_RS01995;Name=gdpS;gbkey=Gene;gene=gdpS;gene_biotype=protein_coding;locus_tag=CP553_RS01995;old_locus_tag=CP553_02075
NZ_PCFD01000003.1	Protein Homology	CDS	91781	92851	.	-	0	ID=cds-WP_002494710.1;Parent=gene-CP553_RS01995;Dbxref=GenBank:WP_002494710.1;Name=WP_002494710.1;gbkey=CDS;gene=gdpS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499319.1;locus_tag=CP553_RS01995;product=GGDEF domain-containing protein GdpS;protein_id=WP_002494710.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	93197	94276	.	+	.	ID=gene-CP553_RS02000;Name=CP553_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02000;old_locus_tag=CP553_02080
NZ_PCFD01000003.1	Protein Homology	CDS	93197	94276	.	+	0	ID=cds-WP_001829686.1;Parent=gene-CP553_RS02000;Dbxref=GenBank:WP_001829686.1;Name=WP_001829686.1;Ontology_term=GO:0070085,GO:0016757,GO:0016780,GO:0046872;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=glycosylation|0070085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829686.1;locus_tag=CP553_RS02000;product=glycosyltransferase family 4 protein;protein_id=WP_001829686.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	94337	94978	.	-	.	ID=gene-CP553_RS02005;Name=CP553_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02005;old_locus_tag=CP553_02085
NZ_PCFD01000003.1	Protein Homology	CDS	94337	94978	.	-	0	ID=cds-WP_001829639.1;Parent=gene-CP553_RS02005;Dbxref=GenBank:WP_001829639.1;Name=WP_001829639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498604.1;locus_tag=CP553_RS02005;product=YigZ family protein;protein_id=WP_001829639.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	95123	95989	.	+	.	ID=gene-CP553_RS02010;Name=fakB1;gbkey=Gene;gene=fakB1;gene_biotype=protein_coding;locus_tag=CP553_RS02010;old_locus_tag=CP553_02090
NZ_PCFD01000003.1	Protein Homology	CDS	95123	95989	.	+	0	ID=cds-WP_001829661.1;Parent=gene-CP553_RS02010;Dbxref=GenBank:WP_001829661.1;Name=WP_001829661.1;gbkey=CDS;gene=fakB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473942.1;locus_tag=CP553_RS02010;product=fatty acid kinase binding subunit FakB1;protein_id=WP_001829661.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	96124	97395	.	+	.	ID=gene-CP553_RS02015;Name=CP553_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02015;old_locus_tag=CP553_02095
NZ_PCFD01000003.1	Protein Homology	CDS	96124	97395	.	+	0	ID=cds-WP_153647370.1;Parent=gene-CP553_RS02015;Dbxref=GenBank:WP_153647370.1;Name=WP_153647370.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433160.1;locus_tag=CP553_RS02015;product=DEAD/DEAH box helicase family protein;protein_id=WP_153647370.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	97388	98062	.	+	.	ID=gene-CP553_RS02020;Name=CP553_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02020;old_locus_tag=CP553_02100
NZ_PCFD01000003.1	Protein Homology	CDS	97388	98062	.	+	0	ID=cds-WP_001829592.1;Parent=gene-CP553_RS02020;Dbxref=GenBank:WP_001829592.1;Name=WP_001829592.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476228.1;locus_tag=CP553_RS02020;product=ComF family protein;protein_id=WP_001829592.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	98123	98692	.	+	.	ID=gene-CP553_RS02025;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=CP553_RS02025;old_locus_tag=CP553_02105
NZ_PCFD01000003.1	Protein Homology	CDS	98123	98692	.	+	0	ID=cds-WP_001829676.1;Parent=gene-CP553_RS02025;Dbxref=GenBank:WP_001829676.1;Name=WP_001829676.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503602.1;locus_tag=CP553_RS02025;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_001829676.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	99358	101892	.	+	.	ID=gene-CP553_RS02030;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=CP553_RS02030;old_locus_tag=CP553_02110
NZ_PCFD01000003.1	Protein Homology	CDS	99358	101892	.	+	0	ID=cds-WP_001829572.1;Parent=gene-CP553_RS02030;Dbxref=GenBank:WP_001829572.1;Name=WP_001829572.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496134.1;locus_tag=CP553_RS02030;product=preprotein translocase subunit SecA;protein_id=WP_001829572.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	102088	103204	.	+	.	ID=gene-CP553_RS02035;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=CP553_RS02035;old_locus_tag=CP553_02115
NZ_PCFD01000003.1	Protein Homology	CDS	102088	102159	.	+	0	ID=cds-WP_010959142.1;Parent=gene-CP553_RS02035;Dbxref=GenBank:WP_010959142.1;Name=WP_010959142.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959142.1;locus_tag=CP553_RS02035;product=peptide chain release factor 2;protein_id=WP_010959142.1;transl_table=11
NZ_PCFD01000003.1	Protein Homology	CDS	102161	103204	.	+	0	ID=cds-WP_010959142.1;Parent=gene-CP553_RS02035;Dbxref=GenBank:WP_010959142.1;Name=WP_010959142.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959142.1;locus_tag=CP553_RS02035;product=peptide chain release factor 2;protein_id=WP_010959142.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	103544	104344	.	+	.	ID=gene-CP553_RS02040;Name=CP553_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02040;old_locus_tag=CP553_02120
NZ_PCFD01000003.1	Protein Homology	CDS	103544	104344	.	+	0	ID=cds-WP_001829621.1;Parent=gene-CP553_RS02040;Dbxref=GenBank:WP_001829621.1;Name=WP_001829621.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473955.1;locus_tag=CP553_RS02040;product=COG3942 and LysM peptidoglycan-binding domain-containing protein;protein_id=WP_001829621.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	104653	105294	.	+	.	ID=gene-CP553_RS02045;Name=CP553_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02045;old_locus_tag=CP553_02125
NZ_PCFD01000003.1	Protein Homology	CDS	104653	105294	.	+	0	ID=cds-WP_001829660.1;Parent=gene-CP553_RS02045;Dbxref=GenBank:WP_001829660.1;Name=WP_001829660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829660.1;locus_tag=CP553_RS02045;product=YfbR-like 5'-deoxynucleotidase;protein_id=WP_001829660.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	105300	105533	.	+	.	ID=gene-CP553_RS02050;Name=CP553_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02050;old_locus_tag=CP553_02130
NZ_PCFD01000003.1	Protein Homology	CDS	105300	105533	.	+	0	ID=cds-WP_001832593.1;Parent=gene-CP553_RS02050;Dbxref=GenBank:WP_001832593.1;Name=WP_001832593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499909.1;locus_tag=CP553_RS02050;product=CsbA family protein;protein_id=WP_001832593.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	106090	108075	.	+	.	ID=gene-CP553_RS02055;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=CP553_RS02055;old_locus_tag=CP553_02140
NZ_PCFD01000003.1	Protein Homology	CDS	106090	108075	.	+	0	ID=cds-WP_002438912.1;Parent=gene-CP553_RS02055;Dbxref=GenBank:WP_002438912.1;Name=WP_002438912.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473941.1;locus_tag=CP553_RS02055;product=excinuclease ABC subunit UvrB;protein_id=WP_002438912.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	108083	110917	.	+	.	ID=gene-CP553_RS02060;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=CP553_RS02060;old_locus_tag=CP553_02145
NZ_PCFD01000003.1	Protein Homology	CDS	108083	110917	.	+	0	ID=cds-WP_001829652.1;Parent=gene-CP553_RS02060;Dbxref=GenBank:WP_001829652.1;Name=WP_001829652.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500278.1;locus_tag=CP553_RS02060;product=excinuclease ABC subunit UvrA;protein_id=WP_001829652.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	111272	112204	.	+	.	ID=gene-CP553_RS02065;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=CP553_RS02065;old_locus_tag=CP553_02150
NZ_PCFD01000003.1	Protein Homology	CDS	111272	112204	.	+	0	ID=cds-WP_001829649.1;Parent=gene-CP553_RS02065;Dbxref=GenBank:WP_001829649.1;Name=WP_001829649.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499338.1;locus_tag=CP553_RS02065;product=HPr(Ser) kinase/phosphatase;protein_id=WP_001829649.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	112210	113049	.	+	.	ID=gene-CP553_RS02070;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=CP553_RS02070;old_locus_tag=CP553_02155
NZ_PCFD01000003.1	Protein Homology	CDS	112210	113049	.	+	0	ID=cds-WP_001829638.1;Parent=gene-CP553_RS02070;Dbxref=GenBank:WP_001829638.1;Name=WP_001829638.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499339.1;locus_tag=CP553_RS02070;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_001829638.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	113046	113582	.	+	.	ID=gene-CP553_RS02075;Name=CP553_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02075;old_locus_tag=CP553_02160
NZ_PCFD01000003.1	Protein Homology	CDS	113046	113582	.	+	0	ID=cds-WP_001832606.1;Parent=gene-CP553_RS02075;Dbxref=GenBank:WP_001832606.1;Name=WP_001832606.1;Ontology_term=GO:0046677,GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486661.1;locus_tag=CP553_RS02075;product=acyltransferase;protein_id=WP_001832606.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	113549	114988	.	+	.	ID=gene-CP553_RS02080;Name=CP553_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02080;old_locus_tag=CP553_02165
NZ_PCFD01000003.1	Protein Homology	CDS	113549	114988	.	+	0	ID=cds-WP_002438913.1;Parent=gene-CP553_RS02080;Dbxref=GenBank:WP_002438913.1;Name=WP_002438913.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445953.1;locus_tag=CP553_RS02080;product=tetratricopeptide repeat protein;protein_id=WP_002438913.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	115053	115985	.	+	.	ID=gene-CP553_RS02085;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=CP553_RS02085;old_locus_tag=CP553_02170
NZ_PCFD01000003.1	Protein Homology	CDS	115053	115985	.	+	0	ID=cds-WP_002438914.1;Parent=gene-CP553_RS02085;Dbxref=GenBank:WP_002438914.1;Name=WP_002438914.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502488.1;locus_tag=CP553_RS02085;product=thioredoxin-disulfide reductase;protein_id=WP_002438914.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	116161	117069	.	+	.	ID=gene-CP553_RS02090;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=CP553_RS02090;old_locus_tag=CP553_02175
NZ_PCFD01000003.1	Protein Homology	CDS	116161	117069	.	+	0	ID=cds-WP_001829594.1;Parent=gene-CP553_RS02090;Dbxref=GenBank:WP_001829594.1;Name=WP_001829594.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_044555174.1;locus_tag=CP553_RS02090;product=RNase adapter RapZ;protein_id=WP_001829594.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	117069	118064	.	+	.	ID=gene-CP553_RS02095;Name=CP553_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02095;old_locus_tag=CP553_02180
NZ_PCFD01000003.1	Protein Homology	CDS	117069	118064	.	+	0	ID=cds-WP_001829626.1;Parent=gene-CP553_RS02095;Dbxref=GenBank:WP_001829626.1;Name=WP_001829626.1;Ontology_term=GO:0043743,GO:0051287;gbkey=CDS;go_function=LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499345.1;locus_tag=CP553_RS02095;product=gluconeogenesis factor YvcK family protein;protein_id=WP_001829626.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	118193	119137	.	+	.	ID=gene-CP553_RS02100;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=CP553_RS02100;old_locus_tag=CP553_02185
NZ_PCFD01000003.1	Protein Homology	CDS	118193	119137	.	+	0	ID=cds-WP_002438915.1;Parent=gene-CP553_RS02100;Dbxref=GenBank:WP_002438915.1;Name=WP_002438915.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499346.1;locus_tag=CP553_RS02100;product=DNA-binding protein WhiA;protein_id=WP_002438915.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	119205	119276	.	-	.	ID=gene-CP553_RS02105;Name=CP553_RS02105;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS02105;old_locus_tag=CP553_02190
NZ_PCFD01000003.1	tRNAscan-SE	tRNA	119205	119276	.	-	.	ID=rna-CP553_RS02105;Parent=gene-CP553_RS02105;anticodon=(pos:complement(119241..119243));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS02105;product=tRNA-Arg
NZ_PCFD01000003.1	tRNAscan-SE	exon	119205	119276	.	-	.	ID=exon-CP553_RS02105-1;Parent=rna-CP553_RS02105;anticodon=(pos:complement(119241..119243));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS02105;product=tRNA-Arg
NZ_PCFD01000003.1	RefSeq	gene	119465	120049	.	+	.	ID=gene-CP553_RS02110;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=CP553_RS02110;old_locus_tag=CP553_02195
NZ_PCFD01000003.1	Protein Homology	CDS	119465	120049	.	+	0	ID=cds-WP_001829659.1;Parent=gene-CP553_RS02110;Dbxref=GenBank:WP_001829659.1;Name=WP_001829659.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829659.1;locus_tag=CP553_RS02110;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_001829659.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	120311	120502	.	-	.	ID=gene-CP553_RS02115;Name=CP553_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02115;old_locus_tag=CP553_02200
NZ_PCFD01000003.1	Protein Homology	CDS	120311	120502	.	-	0	ID=cds-WP_001829614.1;Parent=gene-CP553_RS02115;Dbxref=GenBank:WP_001829614.1;Name=WP_001829614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445958.1;locus_tag=CP553_RS02115;product=hypothetical protein;protein_id=WP_001829614.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	120533	121432	.	-	.	ID=gene-CP553_RS02120;Name=CP553_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02120;old_locus_tag=CP553_02205
NZ_PCFD01000003.1	Protein Homology	CDS	120533	121432	.	-	0	ID=cds-WP_001829630.1;Parent=gene-CP553_RS02120;Dbxref=GenBank:WP_001829630.1;Name=WP_001829630.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489826.1;locus_tag=CP553_RS02120;product=TIGR01777 family oxidoreductase;protein_id=WP_001829630.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	122297	122908	.	+	.	ID=gene-CP553_RS02125;Name=CP553_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02125;old_locus_tag=CP553_02210
NZ_PCFD01000003.1	Protein Homology	CDS	122297	122908	.	+	0	ID=cds-WP_020368431.1;Parent=gene-CP553_RS02125;Dbxref=GenBank:WP_020368431.1;Name=WP_020368431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485609.1;locus_tag=CP553_RS02125;product=DUF4887 domain-containing protein;protein_id=WP_020368431.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	123081	123317	.	-	.	ID=gene-CP553_RS02130;Name=CP553_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02130;old_locus_tag=CP553_02215
NZ_PCFD01000003.1	Protein Homology	CDS	123081	123317	.	-	0	ID=cds-WP_001829687.1;Parent=gene-CP553_RS02130;Dbxref=GenBank:WP_001829687.1;Name=WP_001829687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476443.1;locus_tag=CP553_RS02130;product=hypothetical protein;protein_id=WP_001829687.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	123673	124686	.	+	.	ID=gene-CP553_RS02135;Name=CP553_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02135;old_locus_tag=CP553_02220
NZ_PCFD01000003.1	Protein Homology	CDS	123673	124686	.	+	0	ID=cds-WP_002438918.1;Parent=gene-CP553_RS02135;Dbxref=GenBank:WP_002438918.1;Name=WP_002438918.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499350.1;locus_tag=CP553_RS02135;product=sugar-binding transcriptional regulator;protein_id=WP_002438918.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	124738	125748	.	+	.	ID=gene-CP553_RS02140;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=CP553_RS02140;old_locus_tag=CP553_02225
NZ_PCFD01000003.1	Protein Homology	CDS	124738	125748	.	+	0	ID=cds-WP_001829667.1;Parent=gene-CP553_RS02140;Dbxref=GenBank:WP_001829667.1;Name=WP_001829667.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499351.1;locus_tag=CP553_RS02140;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_001829667.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	125942	127132	.	+	.	ID=gene-CP553_RS02145;Name=CP553_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02145;old_locus_tag=CP553_02230
NZ_PCFD01000003.1	Protein Homology	CDS	125942	127132	.	+	0	ID=cds-WP_001829665.1;Parent=gene-CP553_RS02145;Dbxref=GenBank:WP_001829665.1;Name=WP_001829665.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499352.1;locus_tag=CP553_RS02145;product=phosphoglycerate kinase;protein_id=WP_001829665.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	127263	128024	.	+	.	ID=gene-CP553_RS02150;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=CP553_RS02150;old_locus_tag=CP553_02235
NZ_PCFD01000003.1	Protein Homology	CDS	127263	128024	.	+	0	ID=cds-WP_001829574.1;Parent=gene-CP553_RS02150;Dbxref=GenBank:WP_001829574.1;Name=WP_001829574.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499353.1;locus_tag=CP553_RS02150;product=triose-phosphate isomerase;protein_id=WP_001829574.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	128027	129544	.	+	.	ID=gene-CP553_RS02155;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=CP553_RS02155;old_locus_tag=CP553_02240
NZ_PCFD01000003.1	Protein Homology	CDS	128027	129544	.	+	0	ID=cds-WP_001829591.1;Parent=gene-CP553_RS02155;Dbxref=GenBank:WP_001829591.1;Name=WP_001829591.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956091.1;locus_tag=CP553_RS02155;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_001829591.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	129683	130987	.	+	.	ID=gene-CP553_RS02160;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=CP553_RS02160;old_locus_tag=CP553_02245
NZ_PCFD01000003.1	Protein Homology	CDS	129683	130987	.	+	0	ID=cds-WP_001829595.1;Parent=gene-CP553_RS02160;Dbxref=GenBank:WP_001829595.1;Name=WP_001829595.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1;locus_tag=CP553_RS02160;product=surface-displayed alpha-enolase;protein_id=WP_001829595.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	131153	131611	.	+	.	ID=gene-CP553_RS02165;Name=CP553_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02165;old_locus_tag=CP553_02250
NZ_PCFD01000003.1	Protein Homology	CDS	131153	131611	.	+	0	ID=cds-WP_001829646.1;Parent=gene-CP553_RS02165;Dbxref=GenBank:WP_001829646.1;Name=WP_001829646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495253.1;locus_tag=CP553_RS02165;product=hypothetical protein;protein_id=WP_001829646.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	131680	131913	.	+	.	ID=gene-CP553_RS02170;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=CP553_RS02170;old_locus_tag=CP553_02255
NZ_PCFD01000003.1	Protein Homology	CDS	131680	131913	.	+	0	ID=cds-WP_001829669.1;Parent=gene-CP553_RS02170;Dbxref=GenBank:WP_001829669.1;Name=WP_001829669.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499357.2;locus_tag=CP553_RS02170;product=preprotein translocase subunit SecG;protein_id=WP_001829669.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	132214	132954	.	+	.	ID=gene-CP553_RS02175;Name=CP553_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02175;old_locus_tag=CP553_02260
NZ_PCFD01000003.1	Protein Homology	CDS	132214	132954	.	+	0	ID=cds-WP_001829672.1;Parent=gene-CP553_RS02175;Dbxref=GenBank:WP_001829672.1;Name=WP_001829672.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499358.1;locus_tag=CP553_RS02175;product=alpha/beta hydrolase;protein_id=WP_001829672.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	132989	135367	.	+	.	ID=gene-CP553_RS02180;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=CP553_RS02180;old_locus_tag=CP553_02265
NZ_PCFD01000003.1	Protein Homology	CDS	132989	135367	.	+	0	ID=cds-WP_002438919.1;Parent=gene-CP553_RS02180;Dbxref=GenBank:WP_002438919.1;Name=WP_002438919.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499359.1;locus_tag=CP553_RS02180;product=ribonuclease R;protein_id=WP_002438919.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	135392	135862	.	+	.	ID=gene-CP553_RS02185;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=CP553_RS02185;old_locus_tag=CP553_02270
NZ_PCFD01000003.1	Protein Homology	CDS	135392	135862	.	+	0	ID=cds-WP_001829588.1;Parent=gene-CP553_RS02185;Dbxref=GenBank:WP_001829588.1;Name=WP_001829588.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899691.1;locus_tag=CP553_RS02185;product=SsrA-binding protein SmpB;protein_id=WP_001829588.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	135968	136329	.	+	.	ID=gene-CP553_RS02190;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CP553_RS02190;old_locus_tag=CP553_02275
NZ_PCFD01000003.1	cmsearch	tmRNA	135968	136329	.	+	.	ID=rna-CP553_RS02190;Parent=gene-CP553_RS02190;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS02190;product=transfer-messenger RNA
NZ_PCFD01000003.1	cmsearch	exon	135968	136329	.	+	.	ID=exon-CP553_RS02190-1;Parent=rna-CP553_RS02190;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS02190;product=transfer-messenger RNA
NZ_PCFD01000003.1	RefSeq	gene	136412	136642	.	-	.	ID=gene-CP553_RS02195;Name=CP553_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02195;old_locus_tag=CP553_02280
NZ_PCFD01000003.1	Protein Homology	CDS	136412	136642	.	-	0	ID=cds-WP_002438942.1;Parent=gene-CP553_RS02195;Dbxref=GenBank:WP_002438942.1;Name=WP_002438942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500547.1;locus_tag=CP553_RS02195;product=hypothetical protein;protein_id=WP_002438942.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	pseudogene	136655	137286	.	-	.	ID=gene-CP553_RS12975;Name=CP553_RS12975;end_range=137286,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12975;old_locus_tag=CP553_02285;partial=true;pseudo=true
NZ_PCFD01000003.1	Protein Homology	CDS	136655	137286	.	-	0	ID=cds-CP553_RS12975;Parent=gene-CP553_RS12975;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=137286,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728767.1;locus_tag=CP553_RS12975;partial=true;product=site-specific integrase;pseudo=true;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	137252	137431	.	+	.	ID=gene-CP553_RS02205;Name=CP553_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02205;old_locus_tag=CP553_02290
NZ_PCFD01000003.1	Protein Homology	CDS	137252	137431	.	+	0	ID=cds-WP_001829655.1;Parent=gene-CP553_RS02205;Dbxref=GenBank:WP_001829655.1;Name=WP_001829655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829655.1;locus_tag=CP553_RS02205;product=hypothetical protein;protein_id=WP_001829655.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	137575	138117	.	-	.	ID=gene-CP553_RS02210;Name=CP553_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02210;old_locus_tag=CP553_02295
NZ_PCFD01000003.1	Protein Homology	CDS	137575	138117	.	-	0	ID=cds-WP_001832592.1;Parent=gene-CP553_RS02210;Dbxref=GenBank:WP_001832592.1;Name=WP_001832592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504665.1;locus_tag=CP553_RS02210;product=hypothetical protein;protein_id=WP_001832592.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	138852	139022	.	+	.	ID=gene-CP553_RS02215;Name=CP553_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02215
NZ_PCFD01000003.1	Protein Homology	CDS	138852	139022	.	+	0	ID=cds-WP_001829642.1;Parent=gene-CP553_RS02215;Dbxref=GenBank:WP_001829642.1;Name=WP_001829642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829642.1;locus_tag=CP553_RS02215;product=VraH family peptide resistance protein;protein_id=WP_001829642.1;transl_table=11
NZ_PCFD01000003.1	RefSeq	gene	139280	139513	.	-	.	ID=gene-CP553_RS02220;Name=CP553_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02220;old_locus_tag=CP553_02300
NZ_PCFD01000003.1	Protein Homology	CDS	139280	139513	.	-	0	ID=cds-WP_001829658.1;Parent=gene-CP553_RS02220;Dbxref=GenBank:WP_001829658.1;Name=WP_001829658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829658.1;locus_tag=CP553_RS02220;product=hypothetical protein;protein_id=WP_001829658.1;transl_table=11
##sequence-region NZ_PCFD01000004.1 1 116145
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000004.1	RefSeq	region	1	116145	.	+	.	ID=NZ_PCFD01000004.1:1..116145;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000004.1	RefSeq	gene	511	1362	.	+	.	ID=gene-CP553_RS02225;Name=CP553_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02225;old_locus_tag=CP553_02305
NZ_PCFD01000004.1	Protein Homology	CDS	511	1362	.	+	0	ID=cds-WP_002455963.1;Parent=gene-CP553_RS02225;Dbxref=GenBank:WP_002455963.1;Name=WP_002455963.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368292.1;locus_tag=CP553_RS02225;product=trypsin-like serine peptidase;protein_id=WP_002455963.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	1568	1720	.	+	.	ID=gene-CP553_RS02230;Name=CP553_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02230;old_locus_tag=CP553_02310
NZ_PCFD01000004.1	Protein Homology	CDS	1568	1720	.	+	0	ID=cds-WP_002437676.1;Parent=gene-CP553_RS02230;Dbxref=GenBank:WP_002437676.1;Name=WP_002437676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500916.1;locus_tag=CP553_RS02230;product=beta-class phenol-soluble modulin;protein_id=WP_002437676.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	pseudogene	2139	4606	.	+	.	ID=gene-CP553_RS02235;Name=aap;end_range=4606,.;gbkey=Gene;gene=aap;gene_biotype=pseudogene;locus_tag=CP553_RS02235;old_locus_tag=CP553_02315;partial=true;pseudo=true
NZ_PCFD01000004.1	Protein Homology	CDS	2139	4606	.	+	0	ID=cds-CP553_RS02235;Parent=gene-CP553_RS02235;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4606,.;gbkey=CDS;gene=aap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_217283962.1;locus_tag=CP553_RS02235;partial=true;product=accumulation-associated protein Aap;pseudo=true;transl_table=11
NZ_PCFD01000004.1	RefSeq	pseudogene	4777	6804	.	+	.	ID=gene-CP553_RS02240;Name=aap;gbkey=Gene;gene=aap;gene_biotype=pseudogene;locus_tag=CP553_RS02240;old_locus_tag=CP553_02320;partial=true;pseudo=true;start_range=.,4777
NZ_PCFD01000004.1	Protein Homology	CDS	4777	6804	.	+	0	ID=cds-CP553_RS02240;Parent=gene-CP553_RS02240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=aap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082576.1;locus_tag=CP553_RS02240;partial=true;product=accumulation-associated protein Aap;pseudo=true;start_range=.,4777;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	7061	7213	.	+	.	ID=gene-CP553_RS02245;Name=CP553_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02245;old_locus_tag=CP553_02325
NZ_PCFD01000004.1	Protein Homology	CDS	7061	7213	.	+	0	ID=cds-WP_002437688.1;Parent=gene-CP553_RS02245;Dbxref=GenBank:WP_002437688.1;Name=WP_002437688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500916.1;locus_tag=CP553_RS02245;product=beta-class phenol-soluble modulin;protein_id=WP_002437688.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	7552	8223	.	+	.	ID=gene-CP553_RS02250;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=CP553_RS02250;old_locus_tag=CP553_02330
NZ_PCFD01000004.1	Protein Homology	CDS	7552	8223	.	+	0	ID=cds-WP_002437691.1;Parent=gene-CP553_RS02250;Dbxref=GenBank:WP_002437691.1;Name=WP_002437691.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360181.1;locus_tag=CP553_RS02250;product=dethiobiotin synthase;protein_id=WP_002437691.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	8216	9571	.	+	.	ID=gene-CP553_RS02255;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=CP553_RS02255;old_locus_tag=CP553_02335
NZ_PCFD01000004.1	Protein Homology	CDS	8216	9571	.	+	0	ID=cds-WP_002437694.1;Parent=gene-CP553_RS02255;Dbxref=GenBank:WP_002437694.1;Name=WP_002437694.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494016.1;locus_tag=CP553_RS02255;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_002437694.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	9582	10715	.	+	.	ID=gene-CP553_RS02260;Name=CP553_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02260;old_locus_tag=CP553_02340
NZ_PCFD01000004.1	Protein Homology	CDS	9582	10715	.	+	0	ID=cds-WP_002437695.1;Parent=gene-CP553_RS02260;Dbxref=GenBank:WP_002437695.1;Name=WP_002437695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494017.1;locus_tag=CP553_RS02260;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_002437695.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	10708	11394	.	+	.	ID=gene-CP553_RS02265;Name=CP553_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02265;old_locus_tag=CP553_02345
NZ_PCFD01000004.1	Protein Homology	CDS	10708	11394	.	+	0	ID=cds-WP_002484649.1;Parent=gene-CP553_RS02265;Dbxref=GenBank:WP_002484649.1;Name=WP_002484649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473421.1;locus_tag=CP553_RS02265;product=6-carboxyhexanoate--CoA ligase;protein_id=WP_002484649.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	11502	11819	.	-	.	ID=gene-CP553_RS02270;Name=CP553_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02270;old_locus_tag=CP553_02350
NZ_PCFD01000004.1	Protein Homology	CDS	11502	11819	.	-	0	ID=cds-WP_001830557.1;Parent=gene-CP553_RS02270;Dbxref=GenBank:WP_001830557.1;Name=WP_001830557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830557.1;locus_tag=CP553_RS02270;product=staphostatin A;protein_id=WP_001830557.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	11837	13024	.	-	.	ID=gene-CP553_RS02275;Name=CP553_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02275;old_locus_tag=CP553_02355
NZ_PCFD01000004.1	Protein Homology	CDS	11837	13024	.	-	0	ID=cds-WP_002437704.1;Parent=gene-CP553_RS02275;Dbxref=GenBank:WP_002437704.1;Name=WP_002437704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366922.1;locus_tag=CP553_RS02275;product=cysteine protease staphopain;protein_id=WP_002437704.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	13517	15448	.	+	.	ID=gene-CP553_RS02280;Name=gehD;gbkey=Gene;gene=gehD;gene_biotype=protein_coding;locus_tag=CP553_RS02280;old_locus_tag=CP553_02360
NZ_PCFD01000004.1	Protein Homology	CDS	13517	15448	.	+	0	ID=cds-WP_025987120.1;Parent=gene-CP553_RS02280;Dbxref=GenBank:WP_025987120.1;Name=WP_025987120.1;gbkey=CDS;gene=gehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_128081702.1;locus_tag=CP553_RS02280;product=YSIRK domain-containing triacylglycerol lipase GehD;protein_id=WP_025987120.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	pseudogene	15590	16374	.	+	.	ID=gene-CP553_RS02285;Name=CP553_RS02285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS02285;old_locus_tag=CP553_02365;pseudo=true
NZ_PCFD01000004.1	Protein Homology	CDS	15590	16374	.	+	0	ID=cds-CP553_RS02285;Parent=gene-CP553_RS02285;Note=frameshifted;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487539.1;locus_tag=CP553_RS02285;product=tandem-type lipoprotein;pseudo=true;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	16519	17400	.	-	.	ID=gene-CP553_RS02290;Name=CP553_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02290;old_locus_tag=CP553_02370
NZ_PCFD01000004.1	Protein Homology	CDS	16519	17400	.	-	0	ID=cds-WP_002437714.1;Parent=gene-CP553_RS02290;Dbxref=GenBank:WP_002437714.1;Name=WP_002437714.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475431.1;locus_tag=CP553_RS02290;product=CobW family GTP-binding protein;protein_id=WP_002437714.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	17370	18752	.	-	.	ID=gene-CP553_RS02295;Name=CP553_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02295;old_locus_tag=CP553_02375
NZ_PCFD01000004.1	Protein Homology	CDS	17370	18752	.	-	0	ID=cds-WP_002437716.1;Parent=gene-CP553_RS02295;Dbxref=GenBank:WP_002437716.1;Name=WP_002437716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495189.1;locus_tag=CP553_RS02295;product=nucleoside recognition domain-containing protein;protein_id=WP_002437716.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	18746	19852	.	-	.	ID=gene-CP553_RS02300;Name=CP553_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02300;old_locus_tag=CP553_02380
NZ_PCFD01000004.1	Protein Homology	CDS	18746	19852	.	-	0	ID=cds-WP_002437717.1;Parent=gene-CP553_RS02300;Dbxref=GenBank:WP_002437717.1;Name=WP_002437717.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487534.1;locus_tag=CP553_RS02300;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_002437717.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	20109	21104	.	+	.	ID=gene-CP553_RS02305;Name=CP553_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02305;old_locus_tag=CP553_02385
NZ_PCFD01000004.1	Protein Homology	CDS	20109	21104	.	+	0	ID=cds-WP_002437720.1;Parent=gene-CP553_RS02305;Dbxref=GenBank:WP_002437720.1;Name=WP_002437720.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498112.1;locus_tag=CP553_RS02305;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=WP_002437720.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	21518	22423	.	+	.	ID=gene-CP553_RS02310;Name=CP553_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02310;old_locus_tag=CP553_02390
NZ_PCFD01000004.1	Protein Homology	CDS	21518	22423	.	+	0	ID=cds-WP_002456311.1;Parent=gene-CP553_RS02310;Dbxref=GenBank:WP_002456311.1;Name=WP_002456311.1;Ontology_term=GO:0017013,GO:0016740,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA,metal ion binding|0046872||IEA;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456311.1;locus_tag=CP553_RS02310;product=FAD:protein FMN transferase;protein_id=WP_002456311.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	22506	25523	.	+	.	ID=gene-CP553_RS02315;Name=CP553_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02315;old_locus_tag=CP553_02395
NZ_PCFD01000004.1	Protein Homology	CDS	22506	25523	.	+	0	ID=cds-WP_002437728.1;Parent=gene-CP553_RS02315;Dbxref=GenBank:WP_002437728.1;Name=WP_002437728.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496031.1;locus_tag=CP553_RS02315;product=NADH-dependent flavin oxidoreductase;protein_id=WP_002437728.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	25552	26928	.	+	.	ID=gene-CP553_RS02320;Name=CP553_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02320;old_locus_tag=CP553_02400
NZ_PCFD01000004.1	Protein Homology	CDS	25552	26928	.	+	0	ID=cds-WP_002437731.1;Parent=gene-CP553_RS02320;Dbxref=GenBank:WP_002437731.1;Name=WP_002437731.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446841.1;locus_tag=CP553_RS02320;product=MFS transporter;protein_id=WP_002437731.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	27097	27870	.	+	.	ID=gene-CP553_RS02325;Name=CP553_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02325;old_locus_tag=CP553_02405
NZ_PCFD01000004.1	Protein Homology	CDS	27097	27870	.	+	0	ID=cds-WP_001830577.1;Parent=gene-CP553_RS02325;Dbxref=GenBank:WP_001830577.1;Name=WP_001830577.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase (NAD+) activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484659.1;locus_tag=CP553_RS02325;product=acetoin reductase;protein_id=WP_001830577.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	27998	28687	.	-	.	ID=gene-CP553_RS02330;Name=CP553_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02330;old_locus_tag=CP553_02410
NZ_PCFD01000004.1	Protein Homology	CDS	27998	28687	.	-	0	ID=cds-WP_001830566.1;Parent=gene-CP553_RS02330;Dbxref=GenBank:WP_001830566.1;Name=WP_001830566.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364620.1;locus_tag=CP553_RS02330;product=ABC transporter ATP-binding protein;protein_id=WP_001830566.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	28702	29148	.	-	.	ID=gene-CP553_RS02335;Name=CP553_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02335;old_locus_tag=CP553_02415
NZ_PCFD01000004.1	GeneMarkS-2+	CDS	28702	29148	.	-	0	ID=cds-WP_001832584.1;Parent=gene-CP553_RS02335;Dbxref=GenBank:WP_001832584.1;Name=WP_001832584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS02335;product=hypothetical protein;protein_id=WP_001832584.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	29336	30175	.	+	.	ID=gene-CP553_RS02340;Name=cntK;gbkey=Gene;gene=cntK;gene_biotype=protein_coding;locus_tag=CP553_RS02340;old_locus_tag=CP553_02425
NZ_PCFD01000004.1	Protein Homology	CDS	29336	30175	.	+	0	ID=cds-WP_001830571.1;Parent=gene-CP553_RS02340;Dbxref=GenBank:WP_001830571.1;Name=WP_001830571.1;gbkey=CDS;gene=cntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368392.1;locus_tag=CP553_RS02340;product=histidine racemase CntK;protein_id=WP_001830571.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	30172	30987	.	+	.	ID=gene-CP553_RS02345;Name=cntL;gbkey=Gene;gene=cntL;gene_biotype=protein_coding;locus_tag=CP553_RS02345;old_locus_tag=CP553_02430
NZ_PCFD01000004.1	Protein Homology	CDS	30172	30987	.	+	0	ID=cds-WP_001830574.1;Parent=gene-CP553_RS02345;Dbxref=GenBank:WP_001830574.1;Name=WP_001830574.1;gbkey=CDS;gene=cntL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495193.1;locus_tag=CP553_RS02345;product=staphylopine biosynthesis enzyme CntL;protein_id=WP_001830574.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	30980	32272	.	+	.	ID=gene-CP553_RS02350;Name=cntM;gbkey=Gene;gene=cntM;gene_biotype=protein_coding;locus_tag=CP553_RS02350;old_locus_tag=CP553_02435
NZ_PCFD01000004.1	Protein Homology	CDS	30980	32272	.	+	0	ID=cds-WP_002437743.1;Parent=gene-CP553_RS02350;Dbxref=GenBank:WP_002437743.1;Name=WP_002437743.1;gbkey=CDS;gene=cntM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464346.1;locus_tag=CP553_RS02350;product=staphylopine biosynthesis dehydrogenase;protein_id=WP_002437743.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	32323	33921	.	+	.	ID=gene-CP553_RS02355;Name=cntA;gbkey=Gene;gene=cntA;gene_biotype=protein_coding;locus_tag=CP553_RS02355;old_locus_tag=CP553_02440
NZ_PCFD01000004.1	Protein Homology	CDS	32323	33921	.	+	0	ID=cds-WP_001830462.1;Parent=gene-CP553_RS02355;Dbxref=GenBank:WP_001830462.1;Name=WP_001830462.1;gbkey=CDS;gene=cntA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501226.1;locus_tag=CP553_RS02355;product=staphylopine-dependent metal ABC transporter substrate-binding lipoprotein CntA;protein_id=WP_001830462.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	33934	34869	.	+	.	ID=gene-CP553_RS02360;Name=opp1B;gbkey=Gene;gene=opp1B;gene_biotype=protein_coding;locus_tag=CP553_RS02360;old_locus_tag=CP553_02445
NZ_PCFD01000004.1	Protein Homology	CDS	33934	34869	.	+	0	ID=cds-WP_001830582.1;Parent=gene-CP553_RS02360;Dbxref=GenBank:WP_001830582.1;Name=WP_001830582.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp1B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501225.1;locus_tag=CP553_RS02360;product=nickel/cobalt ABC transporter permease;protein_id=WP_001830582.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	34866	35744	.	+	.	ID=gene-CP553_RS02365;Name=cntC;gbkey=Gene;gene=cntC;gene_biotype=protein_coding;gene_synonym=opp1C;locus_tag=CP553_RS02365;old_locus_tag=CP553_02450
NZ_PCFD01000004.1	Protein Homology	CDS	34866	35744	.	+	0	ID=cds-WP_002437750.1;Parent=gene-CP553_RS02365;Dbxref=GenBank:WP_002437750.1;Name=WP_002437750.1;gbkey=CDS;gene=cntC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470552.1;locus_tag=CP553_RS02365;product=staphylopine uptake ABC transporter permease subunit CntC;protein_id=WP_002437750.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	35731	36546	.	+	.	ID=gene-CP553_RS02370;Name=cntD;gbkey=Gene;gene=cntD;gene_biotype=protein_coding;locus_tag=CP553_RS02370;old_locus_tag=CP553_02455
NZ_PCFD01000004.1	Protein Homology	CDS	35731	36546	.	+	0	ID=cds-WP_001830532.1;Parent=gene-CP553_RS02370;Dbxref=GenBank:WP_001830532.1;Name=WP_001830532.1;gbkey=CDS;gene=cntD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361090.1;locus_tag=CP553_RS02370;product=staphylopine uptake ABC transporter ATP-binding protein CntD;protein_id=WP_001830532.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	36539	37288	.	+	.	ID=gene-CP553_RS02375;Name=CP553_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02375;old_locus_tag=CP553_02460
NZ_PCFD01000004.1	Protein Homology	CDS	36539	37288	.	+	0	ID=cds-WP_001830579.1;Parent=gene-CP553_RS02375;Dbxref=GenBank:WP_001830579.1;Name=WP_001830579.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501229.1;locus_tag=CP553_RS02375;product=ABC transporter ATP-binding protein;protein_id=WP_001830579.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	37300	38490	.	+	.	ID=gene-CP553_RS02380;Name=cntE;gbkey=Gene;gene=cntE;gene_biotype=protein_coding;locus_tag=CP553_RS02380;old_locus_tag=CP553_02465
NZ_PCFD01000004.1	Protein Homology	CDS	37300	38490	.	+	0	ID=cds-WP_001830562.1;Parent=gene-CP553_RS02380;Dbxref=GenBank:WP_001830562.1;Name=WP_001830562.1;gbkey=CDS;gene=cntE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467688.1;locus_tag=CP553_RS02380;product=staphylopine family metallophore export MFS transporter CntE;protein_id=WP_001830562.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	39231	41477	.	+	.	ID=gene-CP553_RS02385;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=CP553_RS02385;old_locus_tag=CP553_02470
NZ_PCFD01000004.1	Protein Homology	CDS	39231	41477	.	+	0	ID=cds-WP_001830559.1;Parent=gene-CP553_RS02385;Dbxref=GenBank:WP_001830559.1;Name=WP_001830559.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498784.1;locus_tag=CP553_RS02385;product=formate C-acetyltransferase;protein_id=WP_001830559.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	41499	42254	.	+	.	ID=gene-CP553_RS02390;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=CP553_RS02390;old_locus_tag=CP553_02475
NZ_PCFD01000004.1	Protein Homology	CDS	41499	42254	.	+	0	ID=cds-WP_001830511.1;Parent=gene-CP553_RS02390;Dbxref=GenBank:WP_001830511.1;Name=WP_001830511.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498785.1;locus_tag=CP553_RS02390;product=pyruvate formate-lyase-activating protein;protein_id=WP_001830511.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	42393	43610	.	-	.	ID=gene-CP553_RS02395;Name=CP553_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02395;old_locus_tag=CP553_02480
NZ_PCFD01000004.1	Protein Homology	CDS	42393	43610	.	-	0	ID=cds-WP_001830510.1;Parent=gene-CP553_RS02395;Dbxref=GenBank:WP_001830510.1;Name=WP_001830510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830510.1;locus_tag=CP553_RS02395;product=ArgE/DapE family deacylase;protein_id=WP_001830510.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	43961	45322	.	+	.	ID=gene-CP553_RS02400;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=CP553_RS02400;old_locus_tag=CP553_02485
NZ_PCFD01000004.1	Protein Homology	CDS	43961	45322	.	+	0	ID=cds-WP_002437758.1;Parent=gene-CP553_RS02400;Dbxref=GenBank:WP_002437758.1;Name=WP_002437758.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437758.1;locus_tag=CP553_RS02400;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_002437758.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	45788	46327	.	+	.	ID=gene-CP553_RS02405;Name=CP553_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02405;old_locus_tag=CP553_02490
NZ_PCFD01000004.1	Protein Homology	CDS	45788	46327	.	+	0	ID=cds-WP_116842981.1;Parent=gene-CP553_RS02405;Dbxref=GenBank:WP_116842981.1;Name=WP_116842981.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464354.1;locus_tag=CP553_RS02405;product=TetR/AcrR family transcriptional regulator;protein_id=WP_116842981.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	46466	47359	.	+	.	ID=gene-CP553_RS02410;Name=CP553_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02410;old_locus_tag=CP553_02495
NZ_PCFD01000004.1	Protein Homology	CDS	46466	47359	.	+	0	ID=cds-WP_002494032.1;Parent=gene-CP553_RS02410;Dbxref=GenBank:WP_002494032.1;Name=WP_002494032.1;Ontology_term=GO:0019475,GO:0043720,GO:0046872;gbkey=CDS;go_function=3-keto-5-aminohexanoate cleavage activity|0043720||IEA,metal ion binding|0046872||IEA;go_process=L-lysine catabolic process to acetate|0019475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502631.1;locus_tag=CP553_RS02410;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_002494032.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	47359	48324	.	+	.	ID=gene-CP553_RS02415;Name=CP553_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02415;old_locus_tag=CP553_02500
NZ_PCFD01000004.1	Protein Homology	CDS	47359	48324	.	+	0	ID=cds-WP_001830516.1;Parent=gene-CP553_RS02415;Dbxref=GenBank:WP_001830516.1;Name=WP_001830516.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830516.1;locus_tag=CP553_RS02415;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_001830516.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	48321	48809	.	+	.	ID=gene-CP553_RS02420;Name=CP553_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02420;old_locus_tag=CP553_02505
NZ_PCFD01000004.1	Protein Homology	CDS	48321	48809	.	+	0	ID=cds-WP_002437763.1;Parent=gene-CP553_RS02420;Dbxref=GenBank:WP_002437763.1;Name=WP_002437763.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446866.1;locus_tag=CP553_RS02420;product=thioesterase family protein;protein_id=WP_002437763.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	48944	50131	.	+	.	ID=gene-CP553_RS02425;Name=CP553_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02425;old_locus_tag=CP553_02510
NZ_PCFD01000004.1	Protein Homology	CDS	48944	50131	.	+	0	ID=cds-WP_001830513.1;Parent=gene-CP553_RS02425;Dbxref=GenBank:WP_001830513.1;Name=WP_001830513.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475443.1;locus_tag=CP553_RS02425;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WP_001830513.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	50128	50763	.	+	.	ID=gene-CP553_RS02430;Name=CP553_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02430;old_locus_tag=CP553_02515
NZ_PCFD01000004.1	Protein Homology	CDS	50128	50763	.	+	0	ID=cds-WP_001830452.1;Parent=gene-CP553_RS02430;Dbxref=GenBank:WP_001830452.1;Name=WP_001830452.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959343.1;locus_tag=CP553_RS02430;product=ABC transporter permease;protein_id=WP_001830452.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	50782	51741	.	+	.	ID=gene-CP553_RS02435;Name=CP553_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02435;old_locus_tag=CP553_02520
NZ_PCFD01000004.1	Protein Homology	CDS	50782	51741	.	+	0	ID=cds-WP_001830497.1;Parent=gene-CP553_RS02435;Dbxref=GenBank:WP_001830497.1;Name=WP_001830497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446869.1;locus_tag=CP553_RS02435;product=osmoprotectant ABC transporter substrate-binding protein;protein_id=WP_001830497.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	51744	52391	.	+	.	ID=gene-CP553_RS02440;Name=CP553_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02440;old_locus_tag=CP553_02525
NZ_PCFD01000004.1	Protein Homology	CDS	51744	52391	.	+	0	ID=cds-WP_001830555.1;Parent=gene-CP553_RS02440;Dbxref=GenBank:WP_001830555.1;Name=WP_001830555.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830555.1;locus_tag=CP553_RS02440;product=ABC transporter permease;protein_id=WP_001830555.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	52432	53199	.	+	.	ID=gene-CP553_RS02445;Name=CP553_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02445;old_locus_tag=CP553_02530
NZ_PCFD01000004.1	Protein Homology	CDS	52432	53199	.	+	0	ID=cds-WP_002437771.1;Parent=gene-CP553_RS02445;Dbxref=GenBank:WP_002437771.1;Name=WP_002437771.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437771.1;locus_tag=CP553_RS02445;product=alpha/beta hydrolase;protein_id=WP_002437771.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	53469	55034	.	-	.	ID=gene-CP553_RS02450;Name=CP553_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02450;old_locus_tag=CP553_02535
NZ_PCFD01000004.1	Protein Homology	CDS	53469	55034	.	-	0	ID=cds-WP_002437775.1;Parent=gene-CP553_RS02450;Dbxref=GenBank:WP_002437775.1;Name=WP_002437775.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437775.1;locus_tag=CP553_RS02450;product=YfcC family protein;protein_id=WP_002437775.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	55199	56131	.	-	.	ID=gene-CP553_RS02455;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CP553_RS02455;old_locus_tag=CP553_02540
NZ_PCFD01000004.1	Protein Homology	CDS	55199	56131	.	-	0	ID=cds-WP_002437777.1;Parent=gene-CP553_RS02455;Dbxref=GenBank:WP_002437777.1;Name=WP_002437777.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499672.1;locus_tag=CP553_RS02455;product=carbamate kinase;protein_id=WP_002437777.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	56154	57155	.	-	.	ID=gene-CP553_RS02460;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CP553_RS02460;old_locus_tag=CP553_02545
NZ_PCFD01000004.1	Protein Homology	CDS	56154	57155	.	-	0	ID=cds-WP_001830522.1;Parent=gene-CP553_RS02460;Dbxref=GenBank:WP_001830522.1;Name=WP_001830522.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499671.1;locus_tag=CP553_RS02460;product=ornithine carbamoyltransferase;protein_id=WP_001830522.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	57640	57864	.	+	.	ID=gene-CP553_RS02465;Name=CP553_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02465;old_locus_tag=CP553_02550
NZ_PCFD01000004.1	Protein Homology	CDS	57640	57864	.	+	0	ID=cds-WP_001830485.1;Parent=gene-CP553_RS02465;Dbxref=GenBank:WP_001830485.1;Name=WP_001830485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830485.1;locus_tag=CP553_RS02465;product=hypothetical protein;protein_id=WP_001830485.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	57968	58396	.	+	.	ID=gene-CP553_RS02470;Name=CP553_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02470;old_locus_tag=CP553_02555
NZ_PCFD01000004.1	Protein Homology	CDS	57968	58396	.	+	0	ID=cds-WP_002437790.1;Parent=gene-CP553_RS02470;Dbxref=GenBank:WP_002437790.1;Name=WP_002437790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437790.1;locus_tag=CP553_RS02470;product=FosB family fosfomycin resistance bacillithiol transferase;protein_id=WP_002437790.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	58504	59379	.	+	.	ID=gene-CP553_RS02475;Name=CP553_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02475;old_locus_tag=CP553_02560
NZ_PCFD01000004.1	Protein Homology	CDS	58504	59379	.	+	0	ID=cds-WP_001830467.1;Parent=gene-CP553_RS02475;Dbxref=GenBank:WP_001830467.1;Name=WP_001830467.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361081.1;locus_tag=CP553_RS02475;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_001830467.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	59669	60634	.	+	.	ID=gene-CP553_RS02480;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=CP553_RS02480;old_locus_tag=CP553_02565
NZ_PCFD01000004.1	Protein Homology	CDS	59669	60634	.	+	0	ID=cds-WP_001830464.1;Parent=gene-CP553_RS02480;Dbxref=GenBank:WP_001830464.1;Name=WP_001830464.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464359.1;locus_tag=CP553_RS02480;product=biotin synthase BioB;protein_id=WP_001830464.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	60939	62042	.	+	.	ID=gene-CP553_RS02485;Name=CP553_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02485;old_locus_tag=CP553_02570
NZ_PCFD01000004.1	Protein Homology	CDS	60939	62042	.	+	0	ID=cds-WP_001830573.1;Parent=gene-CP553_RS02485;Dbxref=GenBank:WP_001830573.1;Name=WP_001830573.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458095.1;locus_tag=CP553_RS02485;product=glycerol dehydrogenase;protein_id=WP_001830573.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	62058	63020	.	+	.	ID=gene-CP553_RS02490;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=CP553_RS02490;old_locus_tag=CP553_02575
NZ_PCFD01000004.1	Protein Homology	CDS	62058	63020	.	+	0	ID=cds-WP_001830519.1;Parent=gene-CP553_RS02490;Dbxref=GenBank:WP_001830519.1;Name=WP_001830519.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361079.1;locus_tag=CP553_RS02490;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_001830519.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	63075	63650	.	+	.	ID=gene-CP553_RS02495;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=CP553_RS02495;old_locus_tag=CP553_02580
NZ_PCFD01000004.1	Protein Homology	CDS	63075	63650	.	+	0	ID=cds-WP_001830509.1;Parent=gene-CP553_RS02495;Dbxref=GenBank:WP_001830509.1;Name=WP_001830509.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464360.1;locus_tag=CP553_RS02495;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_001830509.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	63654	64028	.	+	.	ID=gene-CP553_RS02500;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=CP553_RS02500;old_locus_tag=CP553_02585
NZ_PCFD01000004.1	Protein Homology	CDS	63654	64028	.	+	0	ID=cds-WP_001830585.1;Parent=gene-CP553_RS02500;Dbxref=GenBank:WP_001830585.1;Name=WP_001830585.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830585.1;locus_tag=CP553_RS02500;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_001830585.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	64108	65556	.	-	.	ID=gene-CP553_RS02505;Name=CP553_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02505;old_locus_tag=CP553_02590
NZ_PCFD01000004.1	Protein Homology	CDS	64108	65556	.	-	0	ID=cds-WP_002456315.1;Parent=gene-CP553_RS02505;Dbxref=GenBank:WP_002456315.1;Name=WP_002456315.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503516.1;locus_tag=CP553_RS02505;product=MFS transporter;protein_id=WP_002456315.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	65888	66136	.	+	.	ID=gene-CP553_RS02510;Name=CP553_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02510;old_locus_tag=CP553_02595
NZ_PCFD01000004.1	Protein Homology	CDS	65888	66136	.	+	0	ID=cds-WP_002456767.1;Parent=gene-CP553_RS02510;Dbxref=GenBank:WP_002456767.1;Name=WP_002456767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830580.1;locus_tag=CP553_RS02510;product=hypothetical protein;protein_id=WP_002456767.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	66697	68115	.	+	.	ID=gene-CP553_RS02515;Name=CP553_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02515;old_locus_tag=CP553_02600
NZ_PCFD01000004.1	Protein Homology	CDS	66697	68115	.	+	0	ID=cds-WP_002456317.1;Parent=gene-CP553_RS02515;Dbxref=GenBank:WP_002456317.1;Name=WP_002456317.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473502.1;locus_tag=CP553_RS02515;product=MDR family MFS transporter;protein_id=WP_002456317.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	68155	68361	.	+	.	ID=gene-CP553_RS02520;Name=CP553_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02520;old_locus_tag=CP553_02605
NZ_PCFD01000004.1	Protein Homology	CDS	68155	68361	.	+	0	ID=cds-WP_002456765.1;Parent=gene-CP553_RS02520;Dbxref=GenBank:WP_002456765.1;Name=WP_002456765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456765.1;locus_tag=CP553_RS02520;product=hypothetical protein;protein_id=WP_002456765.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	68637	69878	.	+	.	ID=gene-CP553_RS02525;Name=CP553_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02525;old_locus_tag=CP553_02610
NZ_PCFD01000004.1	Protein Homology	CDS	68637	69878	.	+	0	ID=cds-WP_001830478.1;Parent=gene-CP553_RS02525;Dbxref=GenBank:WP_001830478.1;Name=WP_001830478.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830478.1;locus_tag=CP553_RS02525;product=MFS transporter;protein_id=WP_001830478.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	70076	77239	.	+	.	ID=gene-CP553_RS02530;Name=ausA;gbkey=Gene;gene=ausA;gene_biotype=protein_coding;locus_tag=CP553_RS02530;old_locus_tag=CP553_02615
NZ_PCFD01000004.1	Protein Homology	CDS	70076	77239	.	+	0	ID=cds-WP_001830461.1;Parent=gene-CP553_RS02530;Dbxref=GenBank:WP_001830461.1;Name=WP_001830461.1;gbkey=CDS;gene=ausA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487805.1;locus_tag=CP553_RS02530;product=aureusimine non-ribosomal peptide synthetase AusA;protein_id=WP_001830461.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	77249	77872	.	+	.	ID=gene-CP553_RS02535;Name=ausB;gbkey=Gene;gene=ausB;gene_biotype=protein_coding;locus_tag=CP553_RS02535;old_locus_tag=CP553_02620
NZ_PCFD01000004.1	Protein Homology	CDS	77249	77872	.	+	0	ID=cds-WP_001830554.1;Parent=gene-CP553_RS02535;Dbxref=GenBank:WP_001830554.1;Name=WP_001830554.1;Ontology_term=GO:0016780;gbkey=CDS;gene=ausB;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477283.1;locus_tag=CP553_RS02535;product=aureusimine biosynthesis 4'-phosphopantetheinyl transferase AusB;protein_id=WP_001830554.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	78243	80429	.	+	.	ID=gene-CP553_RS02540;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=CP553_RS02540;old_locus_tag=CP553_02625
NZ_PCFD01000004.1	Protein Homology	CDS	78243	80429	.	+	0	ID=cds-WP_001832578.1;Parent=gene-CP553_RS02540;Dbxref=GenBank:WP_001832578.1;Name=WP_001832578.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458087.1;locus_tag=CP553_RS02540;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_001832578.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	80708	82048	.	+	.	ID=gene-CP553_RS02545;Name=CP553_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02545;old_locus_tag=CP553_02635
NZ_PCFD01000004.1	Protein Homology	CDS	80708	82048	.	+	0	ID=cds-WP_001830529.1;Parent=gene-CP553_RS02545;Dbxref=GenBank:WP_001830529.1;Name=WP_001830529.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467669.1;locus_tag=CP553_RS02545;product=sugar porter family MFS transporter;protein_id=WP_001830529.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	82203	83906	.	+	.	ID=gene-CP553_RS02550;Name=CP553_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02550;old_locus_tag=CP553_02640
NZ_PCFD01000004.1	Protein Homology	CDS	82203	83906	.	+	0	ID=cds-WP_001830575.1;Parent=gene-CP553_RS02550;Dbxref=GenBank:WP_001830575.1;Name=WP_001830575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830575.1;locus_tag=CP553_RS02550;product=ABC-ATPase domain-containing protein;protein_id=WP_001830575.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	84001	84498	.	+	.	ID=gene-CP553_RS02555;Name=CP553_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02555;old_locus_tag=CP553_02645
NZ_PCFD01000004.1	Protein Homology	CDS	84001	84498	.	+	0	ID=cds-WP_001830560.1;Parent=gene-CP553_RS02555;Dbxref=GenBank:WP_001830560.1;Name=WP_001830560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475430.1;locus_tag=CP553_RS02555;product=MepB family protein;protein_id=WP_001830560.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	84633	85535	.	+	.	ID=gene-CP553_RS02560;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=CP553_RS02560;old_locus_tag=CP553_02650
NZ_PCFD01000004.1	Protein Homology	CDS	84633	85535	.	+	0	ID=cds-WP_002458084.1;Parent=gene-CP553_RS02560;Dbxref=GenBank:WP_002458084.1;Name=WP_002458084.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502625.1;locus_tag=CP553_RS02560;product=EamA family transporter RarD;protein_id=WP_002458084.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	85643	86554	.	-	.	ID=gene-CP553_RS02565;Name=CP553_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02565;old_locus_tag=CP553_02655
NZ_PCFD01000004.1	Protein Homology	CDS	85643	86554	.	-	0	ID=cds-WP_001830581.1;Parent=gene-CP553_RS02565;Dbxref=GenBank:WP_001830581.1;Name=WP_001830581.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113616.1;locus_tag=CP553_RS02565;product=ABC transporter substrate-binding protein;protein_id=WP_001830581.1;transl_table=11
NZ_PCFD01000004.1	cmsearch	riboswitch	86611	86712	.	-	.	ID=id-NZ_PCFD01000004.1:86611..86712;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000004.1	RefSeq	gene	86872	88290	.	-	.	ID=gene-CP553_RS02570;Name=CP553_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02570;old_locus_tag=CP553_02660
NZ_PCFD01000004.1	Protein Homology	CDS	86872	88290	.	-	0	ID=cds-WP_001830484.1;Parent=gene-CP553_RS02570;Dbxref=GenBank:WP_001830484.1;Name=WP_001830484.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501478.1;locus_tag=CP553_RS02570;product=anion permease;protein_id=WP_001830484.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	88615	89967	.	+	.	ID=gene-CP553_RS02575;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CP553_RS02575;old_locus_tag=CP553_02665
NZ_PCFD01000004.1	Protein Homology	CDS	88615	89967	.	+	0	ID=cds-WP_001830471.1;Parent=gene-CP553_RS02575;Dbxref=GenBank:WP_001830471.1;Name=WP_001830471.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368030.1;locus_tag=CP553_RS02575;product=dihydrolipoyl dehydrogenase;protein_id=WP_001830471.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	90009	90962	.	+	.	ID=gene-CP553_RS02580;Name=CP553_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02580;old_locus_tag=CP553_02670
NZ_PCFD01000004.1	Protein Homology	CDS	90009	90962	.	+	0	ID=cds-WP_001830565.1;Parent=gene-CP553_RS02580;Dbxref=GenBank:WP_001830565.1;Name=WP_001830565.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458080.1;locus_tag=CP553_RS02580;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_001830565.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	91033	92073	.	+	.	ID=gene-CP553_RS02585;Name=CP553_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02585;old_locus_tag=CP553_02675
NZ_PCFD01000004.1	Protein Homology	CDS	91033	92073	.	+	0	ID=cds-WP_001830482.1;Parent=gene-CP553_RS02585;Dbxref=GenBank:WP_001830482.1;Name=WP_001830482.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830482.1;locus_tag=CP553_RS02585;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_001830482.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	92087	93364	.	+	.	ID=gene-CP553_RS02590;Name=CP553_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02590;old_locus_tag=CP553_02680
NZ_PCFD01000004.1	Protein Homology	CDS	92087	93364	.	+	0	ID=cds-WP_001830479.1;Parent=gene-CP553_RS02590;Dbxref=GenBank:WP_001830479.1;Name=WP_001830479.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494046.1;locus_tag=CP553_RS02590;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_001830479.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	93616	93771	.	+	.	ID=gene-CP553_RS02595;Name=CP553_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02595
NZ_PCFD01000004.1	GeneMarkS-2+	CDS	93616	93771	.	+	0	ID=cds-WP_001830507.1;Parent=gene-CP553_RS02595;Dbxref=GenBank:WP_001830507.1;Name=WP_001830507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS02595;product=hypothetical protein;protein_id=WP_001830507.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	94048	94560	.	+	.	ID=gene-CP553_RS02600;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=CP553_RS02600;old_locus_tag=CP553_02685
NZ_PCFD01000004.1	Protein Homology	CDS	94048	94560	.	+	0	ID=cds-WP_001829442.1;Parent=gene-CP553_RS02600;Dbxref=GenBank:WP_001829442.1;Name=WP_001829442.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829442.1;locus_tag=CP553_RS02600;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_001829442.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	94725	96317	.	-	.	ID=gene-CP553_RS02605;Name=CP553_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02605;old_locus_tag=CP553_02690
NZ_PCFD01000004.1	Protein Homology	CDS	94725	96317	.	-	0	ID=cds-WP_002495210.1;Parent=gene-CP553_RS02605;Dbxref=GenBank:WP_002495210.1;Name=WP_002495210.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495321.1;locus_tag=CP553_RS02605;product=BCCT family transporter;protein_id=WP_002495210.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	96498	97058	.	+	.	ID=gene-CP553_RS02610;Name=CP553_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02610;old_locus_tag=CP553_02695
NZ_PCFD01000004.1	Protein Homology	CDS	96498	97058	.	+	0	ID=cds-WP_001829430.1;Parent=gene-CP553_RS02610;Dbxref=GenBank:WP_001829430.1;Name=WP_001829430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477271.1;locus_tag=CP553_RS02610;product=tubby C-terminal domain-like protein;protein_id=WP_001829430.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	97092	97730	.	-	.	ID=gene-CP553_RS02615;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=CP553_RS02615;old_locus_tag=CP553_02700
NZ_PCFD01000004.1	Protein Homology	CDS	97092	97730	.	-	0	ID=cds-WP_001829422.1;Parent=gene-CP553_RS02615;Dbxref=GenBank:WP_001829422.1;Name=WP_001829422.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503506.1;locus_tag=CP553_RS02615;product=pyroglutamyl-peptidase I;protein_id=WP_001829422.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	97924	98886	.	-	.	ID=gene-CP553_RS02620;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=CP553_RS02620;old_locus_tag=CP553_02705
NZ_PCFD01000004.1	Protein Homology	CDS	97924	98886	.	-	0	ID=cds-WP_001829434.1;Parent=gene-CP553_RS02620;Dbxref=GenBank:WP_001829434.1;Name=WP_001829434.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446905.1;locus_tag=CP553_RS02620;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_001829434.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	99169	100146	.	+	.	ID=gene-CP553_RS02625;Name=CP553_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02625;old_locus_tag=CP553_02710
NZ_PCFD01000004.1	Protein Homology	CDS	99169	100146	.	+	0	ID=cds-WP_002437824.1;Parent=gene-CP553_RS02625;Dbxref=GenBank:WP_002437824.1;Name=WP_002437824.1;Ontology_term=GO:0005515,GO:0016787,GO:0046872;gbkey=CDS;go_function=protein binding|0005515||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501472.1;locus_tag=CP553_RS02625;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_002437824.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	100406	100921	.	-	.	ID=gene-CP553_RS02630;Name=CP553_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02630;old_locus_tag=CP553_02715
NZ_PCFD01000004.1	Protein Homology	CDS	100406	100921	.	-	0	ID=cds-WP_001829423.1;Parent=gene-CP553_RS02630;Dbxref=GenBank:WP_001829423.1;Name=WP_001829423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494583.1;locus_tag=CP553_RS02630;product=YceI family protein;protein_id=WP_001829423.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	102139	103635	.	-	.	ID=gene-CP553_RS02635;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=CP553_RS02635;old_locus_tag=CP553_02725
NZ_PCFD01000004.1	Protein Homology	CDS	102139	103635	.	-	0	ID=cds-WP_001829441.1;Parent=gene-CP553_RS02635;Dbxref=GenBank:WP_001829441.1;Name=WP_001829441.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434914.1;locus_tag=CP553_RS02635;product=L-lactate dehydrogenase (quinone);protein_id=WP_001829441.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	103987	104505	.	+	.	ID=gene-CP553_RS02640;Name=CP553_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02640;old_locus_tag=CP553_02730
NZ_PCFD01000004.1	Protein Homology	CDS	103987	104505	.	+	0	ID=cds-WP_001829416.1;Parent=gene-CP553_RS02640;Dbxref=GenBank:WP_001829416.1;Name=WP_001829416.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829416.1;locus_tag=CP553_RS02640;product=GNAT family N-acetyltransferase;protein_id=WP_001829416.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	104649	105056	.	-	.	ID=gene-CP553_RS02645;Name=CP553_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02645;old_locus_tag=CP553_02735
NZ_PCFD01000004.1	Protein Homology	CDS	104649	105056	.	-	0	ID=cds-WP_001829438.1;Parent=gene-CP553_RS02645;Dbxref=GenBank:WP_001829438.1;Name=WP_001829438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464374.1;locus_tag=CP553_RS02645;product=YjdF family protein;protein_id=WP_001829438.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	105219	105629	.	-	.	ID=gene-CP553_RS02650;Name=CP553_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02650;old_locus_tag=CP553_02740
NZ_PCFD01000004.1	Protein Homology	CDS	105219	105629	.	-	0	ID=cds-WP_001829421.1;Parent=gene-CP553_RS02650;Dbxref=GenBank:WP_001829421.1;Name=WP_001829421.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489626.1;locus_tag=CP553_RS02650;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_001829421.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	105732	106148	.	+	.	ID=gene-CP553_RS02655;Name=CP553_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02655;old_locus_tag=CP553_02745
NZ_PCFD01000004.1	Protein Homology	CDS	105732	106148	.	+	0	ID=cds-WP_001829440.1;Parent=gene-CP553_RS02655;Dbxref=GenBank:WP_001829440.1;Name=WP_001829440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473453.1;locus_tag=CP553_RS02655;product=hypothetical protein;protein_id=WP_001829440.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	106385	107197	.	+	.	ID=gene-CP553_RS02660;Name=CP553_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02660;old_locus_tag=CP553_02750
NZ_PCFD01000004.1	Protein Homology	CDS	106385	107197	.	+	0	ID=cds-WP_001829417.1;Parent=gene-CP553_RS02660;Dbxref=GenBank:WP_001829417.1;Name=WP_001829417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468597.1;locus_tag=CP553_RS02660;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_001829417.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	107222	107836	.	+	.	ID=gene-CP553_RS02665;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=CP553_RS02665;old_locus_tag=CP553_02755
NZ_PCFD01000004.1	Protein Homology	CDS	107222	107836	.	+	0	ID=cds-WP_001829424.1;Parent=gene-CP553_RS02665;Dbxref=GenBank:WP_001829424.1;Name=WP_001829424.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458067.1;locus_tag=CP553_RS02665;product=ATP phosphoribosyltransferase;protein_id=WP_001829424.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	107829	109073	.	+	.	ID=gene-CP553_RS02670;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=CP553_RS02670;old_locus_tag=CP553_02760
NZ_PCFD01000004.1	Protein Homology	CDS	107829	109073	.	+	0	ID=cds-WP_001829419.1;Parent=gene-CP553_RS02670;Dbxref=GenBank:WP_001829419.1;Name=WP_001829419.1;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497701.1;locus_tag=CP553_RS02670;product=histidinol dehydrogenase;protein_id=WP_001829419.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	109189	109767	.	+	.	ID=gene-CP553_RS02675;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=CP553_RS02675;old_locus_tag=CP553_02765
NZ_PCFD01000004.1	Protein Homology	CDS	109189	109767	.	+	0	ID=cds-WP_002437839.1;Parent=gene-CP553_RS02675;Dbxref=GenBank:WP_002437839.1;Name=WP_002437839.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501460.1;locus_tag=CP553_RS02675;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_002437839.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	109764	110342	.	+	.	ID=gene-CP553_RS02680;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=CP553_RS02680;old_locus_tag=CP553_02770
NZ_PCFD01000004.1	Protein Homology	CDS	109764	110342	.	+	0	ID=cds-WP_001829439.1;Parent=gene-CP553_RS02680;Dbxref=GenBank:WP_001829439.1;Name=WP_001829439.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470289.1;locus_tag=CP553_RS02680;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001829439.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	110335	111039	.	+	.	ID=gene-CP553_RS02685;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=CP553_RS02685;old_locus_tag=CP553_02775
NZ_PCFD01000004.1	Protein Homology	CDS	110335	111039	.	+	0	ID=cds-WP_001829444.1;Parent=gene-CP553_RS02685;Dbxref=GenBank:WP_001829444.1;Name=WP_001829444.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487522.1;locus_tag=CP553_RS02685;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=WP_001829444.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	111036	111794	.	+	.	ID=gene-CP553_RS02690;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=CP553_RS02690;old_locus_tag=CP553_02780
NZ_PCFD01000004.1	Protein Homology	CDS	111036	111794	.	+	0	ID=cds-WP_001829431.1;Parent=gene-CP553_RS02690;Dbxref=GenBank:WP_001829431.1;Name=WP_001829431.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458065.1;locus_tag=CP553_RS02690;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_001829431.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	111791	112426	.	+	.	ID=gene-CP553_RS02695;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=CP553_RS02695;old_locus_tag=CP553_02785
NZ_PCFD01000004.1	Protein Homology	CDS	111791	112426	.	+	0	ID=cds-WP_001829420.1;Parent=gene-CP553_RS02695;Dbxref=GenBank:WP_001829420.1;Name=WP_001829420.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494590.1;locus_tag=CP553_RS02695;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_001829420.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	112535	113320	.	-	.	ID=gene-CP553_RS02700;Name=CP553_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02700;old_locus_tag=CP553_02790
NZ_PCFD01000004.1	Protein Homology	CDS	112535	113320	.	-	0	ID=cds-WP_001829426.1;Parent=gene-CP553_RS02700;Dbxref=GenBank:WP_001829426.1;Name=WP_001829426.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829426.1;locus_tag=CP553_RS02700;product=arylamine N-acetyltransferase family protein;protein_id=WP_001829426.1;transl_table=11
NZ_PCFD01000004.1	RefSeq	gene	113726	115792	.	+	.	ID=gene-CP553_RS02705;Name=gehC;gbkey=Gene;gene=gehC;gene_biotype=protein_coding;locus_tag=CP553_RS02705;old_locus_tag=CP553_02800
NZ_PCFD01000004.1	Protein Homology	CDS	113726	115792	.	+	0	ID=cds-WP_002437845.1;Parent=gene-CP553_RS02705;Dbxref=GenBank:WP_002437845.1;Name=WP_002437845.1;gbkey=CDS;gene=gehC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505851.1;locus_tag=CP553_RS02705;product=YSIRK domain-containing triacylglycerol lipase GehC;protein_id=WP_002437845.1;transl_table=11
##sequence-region NZ_PCFD01000005.1 1 101156
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000005.1	RefSeq	region	1	101156	.	+	.	ID=NZ_PCFD01000005.1:1..101156;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000005.1	RefSeq	pseudogene	1	279	.	+	.	ID=gene-CP553_RS02710;Name=CP553_RS02710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS02710;old_locus_tag=CP553_02805;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000005.1	Protein Homology	CDS	1	279	.	+	0	ID=cds-CP553_RS02710;Parent=gene-CP553_RS02710;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476807.1;locus_tag=CP553_RS02710;partial=true;product=aromatic acid exporter family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	331	426	.	-	.	ID=gene-CP553_RS02715;Name=prli42;gbkey=Gene;gene=prli42;gene_biotype=protein_coding;locus_tag=CP553_RS02715
NZ_PCFD01000005.1	Protein Homology	CDS	331	426	.	-	0	ID=cds-WP_002493579.1;Parent=gene-CP553_RS02715;Dbxref=GenBank:WP_002493579.1;Name=WP_002493579.1;gbkey=CDS;gene=prli42;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493579.1;locus_tag=CP553_RS02715;product=stressosome-associated protein Prli42;protein_id=WP_002493579.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	657	1781	.	+	.	ID=gene-CP553_RS02720;Name=CP553_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02720;old_locus_tag=CP553_02810
NZ_PCFD01000005.1	Protein Homology	CDS	657	1781	.	+	0	ID=cds-WP_002440001.1;Parent=gene-CP553_RS02720;Dbxref=GenBank:WP_002440001.1;Name=WP_002440001.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012083654.1;locus_tag=CP553_RS02720;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_002440001.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	1861	3267	.	+	.	ID=gene-CP553_RS02725;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=CP553_RS02725;old_locus_tag=CP553_02815
NZ_PCFD01000005.1	Protein Homology	CDS	1861	3267	.	+	0	ID=cds-WP_002440000.1;Parent=gene-CP553_RS02725;Dbxref=GenBank:WP_002440000.1;Name=WP_002440000.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500120.1;locus_tag=CP553_RS02725;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_002440000.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	3437	5092	.	+	.	ID=gene-CP553_RS02730;Name=CP553_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02730;old_locus_tag=CP553_02820
NZ_PCFD01000005.1	Protein Homology	CDS	3437	5092	.	+	0	ID=cds-WP_002439997.1;Parent=gene-CP553_RS02730;Dbxref=GenBank:WP_002439997.1;Name=WP_002439997.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470624.1;locus_tag=CP553_RS02730;product=glycoside hydrolase family 13 protein;protein_id=WP_002439997.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	5355	6236	.	-	.	ID=gene-CP553_RS02735;Name=CP553_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02735;old_locus_tag=CP553_02825
NZ_PCFD01000005.1	Protein Homology	CDS	5355	6236	.	-	0	ID=cds-WP_001831085.1;Parent=gene-CP553_RS02735;Dbxref=GenBank:WP_001831085.1;Name=WP_001831085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831085.1;locus_tag=CP553_RS02735;product=AraC family transcriptional regulator;protein_id=WP_001831085.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	6437	7921	.	-	.	ID=gene-CP553_RS02740;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=CP553_RS02740;old_locus_tag=CP553_02835
NZ_PCFD01000005.1	Protein Homology	CDS	6437	7921	.	-	0	ID=cds-WP_002456186.1;Parent=gene-CP553_RS02740;Dbxref=GenBank:WP_002456186.1;Name=WP_002456186.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368417.1;locus_tag=CP553_RS02740;product=glucose-6-phosphate dehydrogenase;protein_id=WP_002456186.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	8345	9265	.	+	.	ID=gene-CP553_RS02745;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=CP553_RS02745;old_locus_tag=CP553_02840
NZ_PCFD01000005.1	Protein Homology	CDS	8345	9265	.	+	0	ID=cds-WP_064635281.1;Parent=gene-CP553_RS02745;Dbxref=GenBank:WP_064635281.1;Name=WP_064635281.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439993.1;locus_tag=CP553_RS02745;product=ribonuclease Z;protein_id=WP_064635281.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	9315	10130	.	-	.	ID=gene-CP553_RS02750;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=CP553_RS02750;old_locus_tag=CP553_02845
NZ_PCFD01000005.1	Protein Homology	CDS	9315	10130	.	-	0	ID=cds-WP_001831307.1;Parent=gene-CP553_RS02750;Dbxref=GenBank:WP_001831307.1;Name=WP_001831307.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485765.1;locus_tag=CP553_RS02750;product=pyrroline-5-carboxylate reductase;protein_id=WP_001831307.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	10291	11049	.	+	.	ID=gene-CP553_RS02755;Name=CP553_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02755;old_locus_tag=CP553_02850
NZ_PCFD01000005.1	Protein Homology	CDS	10291	11049	.	+	0	ID=cds-WP_001831231.1;Parent=gene-CP553_RS02755;Dbxref=GenBank:WP_001831231.1;Name=WP_001831231.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475195.1;locus_tag=CP553_RS02755;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_001831231.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	11272	12180	.	-	.	ID=gene-CP553_RS02760;Name=CP553_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02760;old_locus_tag=CP553_02855
NZ_PCFD01000005.1	Protein Homology	CDS	11272	12180	.	-	0	ID=cds-WP_001831310.1;Parent=gene-CP553_RS02760;Dbxref=GenBank:WP_001831310.1;Name=WP_001831310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464198.1;locus_tag=CP553_RS02760;product=aldo/keto reductase;protein_id=WP_001831310.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	12263	12805	.	+	.	ID=gene-CP553_RS02765;Name=CP553_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02765;old_locus_tag=CP553_02860
NZ_PCFD01000005.1	Protein Homology	CDS	12263	12805	.	+	0	ID=cds-WP_001831173.1;Parent=gene-CP553_RS02765;Dbxref=GenBank:WP_001831173.1;Name=WP_001831173.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468381.1;locus_tag=CP553_RS02765;product=NUDIX hydrolase;protein_id=WP_001831173.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	12910	13359	.	+	.	ID=gene-CP553_RS02770;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=CP553_RS02770;old_locus_tag=CP553_02865
NZ_PCFD01000005.1	Protein Homology	CDS	12910	13359	.	+	0	ID=cds-WP_001831103.1;Parent=gene-CP553_RS02770;Dbxref=GenBank:WP_001831103.1;Name=WP_001831103.1;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446493.1;locus_tag=CP553_RS02770;product=ferric iron uptake transcriptional regulator;protein_id=WP_001831103.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	13402	14289	.	+	.	ID=gene-CP553_RS02775;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=CP553_RS02775;old_locus_tag=CP553_02870
NZ_PCFD01000005.1	Protein Homology	CDS	13402	14289	.	+	0	ID=cds-WP_002439987.1;Parent=gene-CP553_RS02775;Dbxref=GenBank:WP_002439987.1;Name=WP_002439987.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500106.1;locus_tag=CP553_RS02775;product=site-specific tyrosine recombinase XerD;protein_id=WP_002439987.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	14342	14866	.	-	.	ID=gene-CP553_RS02780;Name=CP553_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02780;old_locus_tag=CP553_02875
NZ_PCFD01000005.1	Protein Homology	CDS	14342	14866	.	-	0	ID=cds-WP_001831156.1;Parent=gene-CP553_RS02780;Dbxref=GenBank:WP_001831156.1;Name=WP_001831156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497902.1;locus_tag=CP553_RS02780;product=DUF309 domain-containing protein;protein_id=WP_001831156.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	14964	15695	.	+	.	ID=gene-CP553_RS02785;Name=CP553_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02785;old_locus_tag=CP553_02880
NZ_PCFD01000005.1	Protein Homology	CDS	14964	15695	.	+	0	ID=cds-WP_001831064.1;Parent=gene-CP553_RS02785;Dbxref=GenBank:WP_001831064.1;Name=WP_001831064.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500104.1;locus_tag=CP553_RS02785;product=segregation and condensation protein A;protein_id=WP_001831064.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	15688	16230	.	+	.	ID=gene-CP553_RS02790;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=CP553_RS02790;old_locus_tag=CP553_02885
NZ_PCFD01000005.1	Protein Homology	CDS	15688	16230	.	+	0	ID=cds-WP_001830975.1;Parent=gene-CP553_RS02790;Dbxref=GenBank:WP_001830975.1;Name=WP_001830975.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505498.1;locus_tag=CP553_RS02790;product=SMC-Scp complex subunit ScpB;protein_id=WP_001830975.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	16223	16960	.	+	.	ID=gene-CP553_RS02795;Name=CP553_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02795;old_locus_tag=CP553_02890
NZ_PCFD01000005.1	Protein Homology	CDS	16223	16960	.	+	0	ID=cds-WP_001830978.1;Parent=gene-CP553_RS02795;Dbxref=GenBank:WP_001830978.1;Name=WP_001830978.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500102.1;locus_tag=CP553_RS02795;product=pseudouridine synthase;protein_id=WP_001830978.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	17094	17819	.	+	.	ID=gene-CP553_RS02800;Name=CP553_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02800;old_locus_tag=CP553_02895
NZ_PCFD01000005.1	Protein Homology	CDS	17094	17819	.	+	0	ID=cds-WP_001831066.1;Parent=gene-CP553_RS02800;Dbxref=GenBank:WP_001831066.1;Name=WP_001831066.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500101.1;locus_tag=CP553_RS02800;product=response regulator transcription factor;protein_id=WP_001831066.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	17803	19569	.	+	.	ID=gene-CP553_RS02805;Name=CP553_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02805;old_locus_tag=CP553_02900
NZ_PCFD01000005.1	Protein Homology	CDS	17803	19569	.	+	0	ID=cds-WP_001831150.1;Parent=gene-CP553_RS02805;Dbxref=GenBank:WP_001831150.1;Name=WP_001831150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503152.1;locus_tag=CP553_RS02805;product=ATP-binding protein;protein_id=WP_001831150.1;transl_table=11
NZ_PCFD01000005.1	cmsearch	riboswitch	19963	20098	.	+	.	ID=id-NZ_PCFD01000005.1:19963..20098;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000005.1	RefSeq	gene	20161	20700	.	+	.	ID=gene-CP553_RS02810;Name=CP553_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02810;old_locus_tag=CP553_02905
NZ_PCFD01000005.1	Protein Homology	CDS	20161	20700	.	+	0	ID=cds-WP_001830988.1;Parent=gene-CP553_RS02810;Dbxref=GenBank:WP_001830988.1;Name=WP_001830988.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830988.1;locus_tag=CP553_RS02810;product=ECF transporter S component;protein_id=WP_001830988.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	21105	21353	.	-	.	ID=gene-CP553_RS02815;Name=CP553_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02815;old_locus_tag=CP553_02915
NZ_PCFD01000005.1	Protein Homology	CDS	21105	21353	.	-	0	ID=cds-WP_001831262.1;Parent=gene-CP553_RS02815;Dbxref=GenBank:WP_001831262.1;Name=WP_001831262.1;Ontology_term=GO:0005506,GO:0009055;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449743.1;locus_tag=CP553_RS02815;product=ferredoxin;protein_id=WP_001831262.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	21462	22424	.	+	.	ID=gene-CP553_RS02820;Name=CP553_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02820;old_locus_tag=CP553_02920
NZ_PCFD01000005.1	Protein Homology	CDS	21462	22424	.	+	0	ID=cds-WP_002456188.1;Parent=gene-CP553_RS02820;Dbxref=GenBank:WP_002456188.1;Name=WP_002456188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486993.1;locus_tag=CP553_RS02820;product=helix-turn-helix domain-containing protein;protein_id=WP_002456188.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	22411	23790	.	+	.	ID=gene-CP553_RS02825;Name=CP553_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02825;old_locus_tag=CP553_02925
NZ_PCFD01000005.1	Protein Homology	CDS	22411	23790	.	+	0	ID=cds-WP_001831100.1;Parent=gene-CP553_RS02825;Dbxref=GenBank:WP_001831100.1;Name=WP_001831100.1;Ontology_term=GO:0006281,GO:0003677,GO:0005524,GO:0016887,GO:0043138;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,3'-5' DNA helicase activity|0043138||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464202.1;locus_tag=CP553_RS02825;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_001831100.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	23947	25329	.	+	.	ID=gene-CP553_RS02830;Name=ebpS;gbkey=Gene;gene=ebpS;gene_biotype=protein_coding;locus_tag=CP553_RS02830;old_locus_tag=CP553_02930
NZ_PCFD01000005.1	Protein Homology	CDS	23947	25329	.	+	0	ID=cds-WP_010959181.1;Parent=gene-CP553_RS02830;Dbxref=GenBank:WP_010959181.1;Name=WP_010959181.1;gbkey=CDS;gene=ebpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500988.1;locus_tag=CP553_RS02830;product=elastin-binding protein EbpS;protein_id=WP_010959181.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	25462	26448	.	+	.	ID=gene-CP553_RS02835;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=CP553_RS02835;old_locus_tag=CP553_02935
NZ_PCFD01000005.1	Protein Homology	CDS	25462	26448	.	+	0	ID=cds-WP_001831121.1;Parent=gene-CP553_RS02835;Dbxref=GenBank:WP_001831121.1;Name=WP_001831121.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500017.1;locus_tag=CP553_RS02835;product=bacillithiol disulfide reductase YpdA;protein_id=WP_001831121.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	26660	27628	.	-	.	ID=gene-CP553_RS02840;Name=CP553_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02840;old_locus_tag=CP553_02940
NZ_PCFD01000005.1	Protein Homology	CDS	26660	27628	.	-	0	ID=cds-WP_001831213.1;Parent=gene-CP553_RS02840;Dbxref=GenBank:WP_001831213.1;Name=WP_001831213.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363133.1;locus_tag=CP553_RS02840;product=asparaginase;protein_id=WP_001831213.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	27707	28354	.	+	.	ID=gene-CP553_RS02845;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=CP553_RS02845;old_locus_tag=CP553_02945
NZ_PCFD01000005.1	Protein Homology	CDS	27707	28354	.	+	0	ID=cds-WP_002439971.1;Parent=gene-CP553_RS02845;Dbxref=GenBank:WP_002439971.1;Name=WP_002439971.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476787.1;locus_tag=CP553_RS02845;product=(d)CMP kinase;protein_id=WP_002439971.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	28838	30016	.	+	.	ID=gene-CP553_RS02850;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=CP553_RS02850;old_locus_tag=CP553_02950
NZ_PCFD01000005.1	Protein Homology	CDS	28838	30016	.	+	0	ID=cds-WP_116842982.1;Parent=gene-CP553_RS02850;Dbxref=GenBank:WP_116842982.1;Name=WP_116842982.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831057.1;locus_tag=CP553_RS02850;product=30S ribosomal protein S1;protein_id=WP_116842982.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	30232	31542	.	+	.	ID=gene-CP553_RS02855;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=CP553_RS02855;old_locus_tag=CP553_02955
NZ_PCFD01000005.1	Protein Homology	CDS	30232	31542	.	+	0	ID=cds-WP_001831042.1;Parent=gene-CP553_RS02855;Dbxref=GenBank:WP_001831042.1;Name=WP_001831042.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=CP553_RS02855;product=ribosome biogenesis GTPase Der;protein_id=WP_001831042.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	31563	32561	.	+	.	ID=gene-CP553_RS02860;Name=CP553_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02860;old_locus_tag=CP553_02960
NZ_PCFD01000005.1	Protein Homology	CDS	31563	32561	.	+	0	ID=cds-WP_001831154.1;Parent=gene-CP553_RS02860;Dbxref=GenBank:WP_001831154.1;Name=WP_001831154.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500009.1;locus_tag=CP553_RS02860;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001831154.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	32732	33004	.	+	.	ID=gene-CP553_RS02865;Name=CP553_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02865;old_locus_tag=CP553_02965
NZ_PCFD01000005.1	Protein Homology	CDS	32732	33004	.	+	0	ID=cds-WP_001043863.1;Parent=gene-CP553_RS02865;Dbxref=GenBank:WP_001043863.1;Name=WP_001043863.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=CP553_RS02865;product=HU family DNA-binding protein;protein_id=WP_001043863.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	33474	34052	.	+	.	ID=gene-CP553_RS02870;Name=CP553_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02870;old_locus_tag=CP553_02970
NZ_PCFD01000005.1	Protein Homology	CDS	33474	34052	.	+	0	ID=cds-WP_001831003.1;Parent=gene-CP553_RS02870;Dbxref=GenBank:WP_001831003.1;Name=WP_001831003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493593.1;locus_tag=CP553_RS02870;product=hypothetical protein;protein_id=WP_001831003.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	34045	34770	.	+	.	ID=gene-CP553_RS02875;Name=CP553_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02875;old_locus_tag=CP553_02975
NZ_PCFD01000005.1	Protein Homology	CDS	34045	34770	.	+	0	ID=cds-WP_001831089.1;Parent=gene-CP553_RS02875;Dbxref=GenBank:WP_001831089.1;Name=WP_001831089.1;Ontology_term=GO:0009234,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476783.1;locus_tag=CP553_RS02875;product=demethylmenaquinone methyltransferase;protein_id=WP_001831089.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	34772	35731	.	+	.	ID=gene-CP553_RS02880;Name=CP553_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02880;old_locus_tag=CP553_02980
NZ_PCFD01000005.1	Protein Homology	CDS	34772	35731	.	+	0	ID=cds-WP_001831120.1;Parent=gene-CP553_RS02880;Dbxref=GenBank:WP_001831120.1;Name=WP_001831120.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368525.1;locus_tag=CP553_RS02880;product=polyprenyl synthetase family protein;protein_id=WP_001831120.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	35871	36320	.	+	.	ID=gene-CP553_RS02885;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=CP553_RS02885;old_locus_tag=CP553_02985
NZ_PCFD01000005.1	Protein Homology	CDS	35871	36320	.	+	0	ID=cds-WP_001831235.1;Parent=gene-CP553_RS02885;Dbxref=GenBank:WP_001831235.1;Name=WP_001831235.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463054.1;locus_tag=CP553_RS02885;product=nucleoside-diphosphate kinase;protein_id=WP_001831235.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	36801	37967	.	+	.	ID=gene-CP553_RS02890;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=CP553_RS02890;old_locus_tag=CP553_02990
NZ_PCFD01000005.1	Protein Homology	CDS	36801	37967	.	+	0	ID=cds-WP_001831020.1;Parent=gene-CP553_RS02890;Dbxref=GenBank:WP_001831020.1;Name=WP_001831020.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500001.1;locus_tag=CP553_RS02890;product=chorismate synthase;protein_id=WP_001831020.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	37995	39059	.	+	.	ID=gene-CP553_RS02895;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=CP553_RS02895;old_locus_tag=CP553_02995
NZ_PCFD01000005.1	Protein Homology	CDS	37995	39059	.	+	0	ID=cds-WP_001831320.1;Parent=gene-CP553_RS02895;Dbxref=GenBank:WP_001831320.1;Name=WP_001831320.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368319.1;locus_tag=CP553_RS02895;product=3-dehydroquinate synthase;protein_id=WP_001831320.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	39069	40370	.	+	.	ID=gene-CP553_RS02900;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=CP553_RS02900;old_locus_tag=CP553_03000
NZ_PCFD01000005.1	Protein Homology	CDS	39069	40370	.	+	0	ID=cds-WP_002456189.1;Parent=gene-CP553_RS02900;Dbxref=GenBank:WP_002456189.1;Name=WP_002456189.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503337.1;locus_tag=CP553_RS02900;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_002456189.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	40374	41618	.	+	.	ID=gene-CP553_RS02905;Name=CP553_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02905;old_locus_tag=CP553_03005
NZ_PCFD01000005.1	Protein Homology	CDS	40374	41618	.	+	0	ID=cds-WP_001831060.1;Parent=gene-CP553_RS02905;Dbxref=GenBank:WP_001831060.1;Name=WP_001831060.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831060.1;locus_tag=CP553_RS02905;product=tetratricopeptide repeat protein;protein_id=WP_001831060.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	41632	42195	.	+	.	ID=gene-CP553_RS02910;Name=CP553_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02910;old_locus_tag=CP553_03010
NZ_PCFD01000005.1	Protein Homology	CDS	41632	42195	.	+	0	ID=cds-WP_001831161.1;Parent=gene-CP553_RS02910;Dbxref=GenBank:WP_001831161.1;Name=WP_001831161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012098999.1;locus_tag=CP553_RS02910;product=YpiB family protein;protein_id=WP_001831161.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	42207	42800	.	+	.	ID=gene-CP553_RS02915;Name=CP553_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02915;old_locus_tag=CP553_03015
NZ_PCFD01000005.1	Protein Homology	CDS	42207	42800	.	+	0	ID=cds-WP_001831230.1;Parent=gene-CP553_RS02915;Dbxref=GenBank:WP_001831230.1;Name=WP_001831230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468384.1;locus_tag=CP553_RS02915;product=DUF1405 domain-containing protein;protein_id=WP_001831230.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	42845	43540	.	+	.	ID=gene-CP553_RS02920;Name=CP553_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02920;old_locus_tag=CP553_03020
NZ_PCFD01000005.1	Protein Homology	CDS	42845	43540	.	+	0	ID=cds-WP_001831045.1;Parent=gene-CP553_RS02920;Dbxref=GenBank:WP_001831045.1;Name=WP_001831045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831045.1;locus_tag=CP553_RS02920;product=zinc metallopeptidase;protein_id=WP_001831045.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	43721	44038	.	+	.	ID=gene-CP553_RS02925;Name=CP553_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02925;old_locus_tag=CP553_03025
NZ_PCFD01000005.1	Protein Homology	CDS	43721	44038	.	+	0	ID=cds-WP_001832769.1;Parent=gene-CP553_RS02925;Dbxref=GenBank:WP_001832769.1;Name=WP_001832769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499994.1;locus_tag=CP553_RS02925;product=nucleotide pyrophosphohydrolase;protein_id=WP_001832769.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	44060	45202	.	+	.	ID=gene-CP553_RS02930;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=CP553_RS02930;old_locus_tag=CP553_03030
NZ_PCFD01000005.1	Protein Homology	CDS	44060	45202	.	+	0	ID=cds-WP_001831222.1;Parent=gene-CP553_RS02930;Dbxref=GenBank:WP_001831222.1;Name=WP_001831222.1;Ontology_term=GO:0071793,GO:0016757;gbkey=CDS;gene=bshA;go_function=glycosyltransferase activity|0016757||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831222.1;locus_tag=CP553_RS02930;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=WP_001831222.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	45192	46394	.	+	.	ID=gene-CP553_RS02935;Name=CP553_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02935;old_locus_tag=CP553_03035
NZ_PCFD01000005.1	Protein Homology	CDS	45192	46394	.	+	0	ID=cds-WP_001831104.1;Parent=gene-CP553_RS02935;Dbxref=GenBank:WP_001831104.1;Name=WP_001831104.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831104.1;locus_tag=CP553_RS02935;product=CCA tRNA nucleotidyltransferase;protein_id=WP_001831104.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	46381	47352	.	+	.	ID=gene-CP553_RS02940;Name=CP553_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02940;old_locus_tag=CP553_03040
NZ_PCFD01000005.1	Protein Homology	CDS	46381	47352	.	+	0	ID=cds-WP_001831050.1;Parent=gene-CP553_RS02940;Dbxref=GenBank:WP_001831050.1;Name=WP_001831050.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473603.1;locus_tag=CP553_RS02940;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_001831050.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	47377	50085	.	+	.	ID=gene-CP553_RS02945;Name=CP553_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02945;old_locus_tag=CP553_03045
NZ_PCFD01000005.1	Protein Homology	CDS	47377	50085	.	+	0	ID=cds-WP_001831318.1;Parent=gene-CP553_RS02945;Dbxref=GenBank:WP_001831318.1;Name=WP_001831318.1;Ontology_term=GO:0006139,GO:0003676,GO:0004386,GO:0005524,GO:0016818;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500984.1;locus_tag=CP553_RS02945;product=helicase C-terminal domain-containing protein;protein_id=WP_001831318.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	50206	51498	.	+	.	ID=gene-CP553_RS02950;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=CP553_RS02950;old_locus_tag=CP553_03050
NZ_PCFD01000005.1	Protein Homology	CDS	50206	51498	.	+	0	ID=cds-WP_002439780.1;Parent=gene-CP553_RS02950;Dbxref=GenBank:WP_002439780.1;Name=WP_002439780.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499989.1;locus_tag=CP553_RS02950;product=asparagine--tRNA ligase;protein_id=WP_002439780.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	51591	52277	.	+	.	ID=gene-CP553_RS02955;Name=CP553_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02955;old_locus_tag=CP553_03055
NZ_PCFD01000005.1	Protein Homology	CDS	51591	52277	.	+	0	ID=cds-WP_001831014.1;Parent=gene-CP553_RS02955;Dbxref=GenBank:WP_001831014.1;Name=WP_001831014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499988.1;locus_tag=CP553_RS02955;product=DnaD domain-containing protein;protein_id=WP_001831014.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	52267	52926	.	+	.	ID=gene-CP553_RS02960;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=CP553_RS02960;old_locus_tag=CP553_03060
NZ_PCFD01000005.1	Protein Homology	CDS	52267	52926	.	+	0	ID=cds-WP_002439779.1;Parent=gene-CP553_RS02960;Dbxref=GenBank:WP_002439779.1;Name=WP_002439779.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499987.1;locus_tag=CP553_RS02960;product=endonuclease III;protein_id=WP_002439779.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	52931	53263	.	+	.	ID=gene-CP553_RS02965;Name=CP553_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02965;old_locus_tag=CP553_03065
NZ_PCFD01000005.1	Protein Homology	CDS	52931	53263	.	+	0	ID=cds-WP_001831277.1;Parent=gene-CP553_RS02965;Dbxref=GenBank:WP_001831277.1;Name=WP_001831277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473655.1;locus_tag=CP553_RS02965;product=YpoC family protein;protein_id=WP_001831277.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	53453	55687	.	-	.	ID=gene-CP553_RS02970;Name=CP553_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02970;old_locus_tag=CP553_03070
NZ_PCFD01000005.1	Protein Homology	CDS	53453	55687	.	-	0	ID=cds-WP_002439777.1;Parent=gene-CP553_RS02970;Dbxref=GenBank:WP_002439777.1;Name=WP_002439777.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0008955,GO:0016757;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,glycosyltransferase activity|0016757||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503333.1;locus_tag=CP553_RS02970;product=transglycosylase domain-containing protein;protein_id=WP_002439777.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	55684	56310	.	-	.	ID=gene-CP553_RS02975;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=CP553_RS02975;old_locus_tag=CP553_03075
NZ_PCFD01000005.1	Protein Homology	CDS	55684	56310	.	-	0	ID=cds-WP_002495428.1;Parent=gene-CP553_RS02975;Dbxref=GenBank:WP_002495428.1;Name=WP_002495428.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834552.1;locus_tag=CP553_RS02975;product=Holliday junction resolvase RecU;protein_id=WP_002495428.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	56654	56986	.	+	.	ID=gene-CP553_RS02980;Name=CP553_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02980;old_locus_tag=CP553_03080
NZ_PCFD01000005.1	Protein Homology	CDS	56654	56986	.	+	0	ID=cds-WP_002439773.1;Parent=gene-CP553_RS02980;Dbxref=GenBank:WP_002439773.1;Name=WP_002439773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831244.1;locus_tag=CP553_RS02980;product=YppE family protein;protein_id=WP_002439773.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	56998	57564	.	+	.	ID=gene-CP553_RS02985;Name=CP553_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS02985;old_locus_tag=CP553_03085
NZ_PCFD01000005.1	Protein Homology	CDS	56998	57564	.	+	0	ID=cds-WP_002456190.1;Parent=gene-CP553_RS02985;Dbxref=GenBank:WP_002456190.1;Name=WP_002456190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433797.1;locus_tag=CP553_RS02985;product=DUF1273 domain-containing protein;protein_id=WP_002456190.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	57578	57916	.	+	.	ID=gene-CP553_RS02990;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=CP553_RS02990;old_locus_tag=CP553_03090
NZ_PCFD01000005.1	Protein Homology	CDS	57578	57916	.	+	0	ID=cds-WP_001831034.1;Parent=gene-CP553_RS02990;Dbxref=GenBank:WP_001831034.1;Name=WP_001831034.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499980.1;locus_tag=CP553_RS02990;product=cell division regulator GpsB;protein_id=WP_001831034.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	57985	58368	.	+	.	ID=gene-CP553_RS02995;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CP553_RS02995;old_locus_tag=CP553_03095
NZ_PCFD01000005.1	cmsearch	RNase_P_RNA	57985	58368	.	+	.	ID=rna-CP553_RS02995;Parent=gene-CP553_RS02995;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS02995;product=RNase P RNA component class B
NZ_PCFD01000005.1	cmsearch	exon	57985	58368	.	+	.	ID=exon-CP553_RS02995-1;Parent=rna-CP553_RS02995;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS02995;product=RNase P RNA component class B
NZ_PCFD01000005.1	RefSeq	gene	58558	59694	.	+	.	ID=gene-CP553_RS03000;Name=CP553_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03000;old_locus_tag=CP553_03100
NZ_PCFD01000005.1	Protein Homology	CDS	58558	59694	.	+	0	ID=cds-WP_002439767.1;Parent=gene-CP553_RS03000;Dbxref=GenBank:WP_002439767.1;Name=WP_002439767.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446454.1;locus_tag=CP553_RS03000;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_002439767.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	59862	60500	.	+	.	ID=gene-CP553_RS03005;Name=CP553_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03005;old_locus_tag=CP553_03105
NZ_PCFD01000005.1	Protein Homology	CDS	59862	60500	.	+	0	ID=cds-WP_001831317.1;Parent=gene-CP553_RS03005;Dbxref=GenBank:WP_001831317.1;Name=WP_001831317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831317.1;locus_tag=CP553_RS03005;product=SDR family oxidoreductase;protein_id=WP_001831317.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	60878	64315	.	+	.	ID=gene-CP553_RS03010;Name=CP553_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03010;old_locus_tag=CP553_03110
NZ_PCFD01000005.1	Protein Homology	CDS	60878	64315	.	+	0	ID=cds-WP_116842983.1;Parent=gene-CP553_RS03010;Dbxref=GenBank:WP_116842983.1;Name=WP_116842983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020359939.1;locus_tag=CP553_RS03010;product=dynamin family protein;protein_id=WP_116842983.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	64334	65212	.	+	.	ID=gene-CP553_RS03015;Name=CP553_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03015;old_locus_tag=CP553_03115
NZ_PCFD01000005.1	Protein Homology	CDS	64334	65212	.	+	0	ID=cds-WP_001830929.1;Parent=gene-CP553_RS03015;Dbxref=GenBank:WP_001830929.1;Name=WP_001830929.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830929.1;locus_tag=CP553_RS03015;product=5'-3' exonuclease;protein_id=WP_001830929.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	65556	96002	.	+	.	ID=gene-CP553_RS03020;Name=ebh;gbkey=Gene;gene=ebh;gene_biotype=protein_coding;locus_tag=CP553_RS03020;old_locus_tag=CP553_03120
NZ_PCFD01000005.1	Protein Homology	CDS	65556	96002	.	+	0	ID=cds-WP_080356798.1;Parent=gene-CP553_RS03020;Dbxref=GenBank:WP_080356798.1;Name=WP_080356798.1;Ontology_term=GO:0006972;gbkey=CDS;gene=ebh;go_process=hyperosmotic response|0006972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489985.1;locus_tag=CP553_RS03020;product=hyperosmolarity resistance protein Ebh;protein_id=WP_080356798.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	96177	96569	.	-	.	ID=gene-CP553_RS03025;Name=CP553_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03025;old_locus_tag=CP553_03125
NZ_PCFD01000005.1	Protein Homology	CDS	96177	96569	.	-	0	ID=cds-WP_002439759.1;Parent=gene-CP553_RS03025;Dbxref=GenBank:WP_002439759.1;Name=WP_002439759.1;Ontology_term=GO:0043137,GO:0000287,GO:0003676,GO:0004523;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=DNA replication%2C removal of RNA primer|0043137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439759.1;locus_tag=CP553_RS03025;product=ribonuclease HI family protein;protein_id=WP_002439759.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	96894	97598	.	-	.	ID=gene-CP553_RS03030;Name=CP553_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03030;old_locus_tag=CP553_03130
NZ_PCFD01000005.1	Protein Homology	CDS	96894	97598	.	-	0	ID=cds-WP_001831106.1;Parent=gene-CP553_RS03030;Dbxref=GenBank:WP_001831106.1;Name=WP_001831106.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499965.1;locus_tag=CP553_RS03030;product=queuosine precursor transporter;protein_id=WP_001831106.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	97849	98043	.	+	.	ID=gene-CP553_RS03035;Name=CP553_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03035;old_locus_tag=CP553_03135
NZ_PCFD01000005.1	Protein Homology	CDS	97849	98043	.	+	0	ID=cds-WP_002439757.1;Parent=gene-CP553_RS03035;Dbxref=GenBank:WP_002439757.1;Name=WP_002439757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439757.1;locus_tag=CP553_RS03035;product=zinc-finger domain-containing protein;protein_id=WP_002439757.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	98055	98315	.	+	.	ID=gene-CP553_RS03040;Name=CP553_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03040;old_locus_tag=CP553_03140
NZ_PCFD01000005.1	Protein Homology	CDS	98055	98315	.	+	0	ID=cds-WP_001831110.1;Parent=gene-CP553_RS03040;Dbxref=GenBank:WP_001831110.1;Name=WP_001831110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831110.1;locus_tag=CP553_RS03040;product=NifU N-terminal domain-containing protein;protein_id=WP_001831110.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	98367	98804	.	+	.	ID=gene-CP553_RS03045;Name=brxA;gbkey=Gene;gene=brxA;gene_biotype=protein_coding;locus_tag=CP553_RS03045;old_locus_tag=CP553_03145
NZ_PCFD01000005.1	Protein Homology	CDS	98367	98804	.	+	0	ID=cds-WP_002457670.1;Parent=gene-CP553_RS03045;Dbxref=GenBank:WP_002457670.1;Name=WP_002457670.1;gbkey=CDS;gene=brxA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499961.1;locus_tag=CP553_RS03045;product=bacilliredoxin BrxA;protein_id=WP_002457670.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	99016	100065	.	+	.	ID=gene-CP553_RS03050;Name=CP553_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03050;old_locus_tag=CP553_03150
NZ_PCFD01000005.1	Protein Homology	CDS	99016	100065	.	+	0	ID=cds-WP_002439754.1;Parent=gene-CP553_RS03050;Dbxref=GenBank:WP_002439754.1;Name=WP_002439754.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476762.1;locus_tag=CP553_RS03050;product=ABC transporter permease;protein_id=WP_002439754.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	gene	100081	100743	.	+	.	ID=gene-CP553_RS03055;Name=CP553_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03055;old_locus_tag=CP553_03155
NZ_PCFD01000005.1	Protein Homology	CDS	100081	100743	.	+	0	ID=cds-WP_002439753.1;Parent=gene-CP553_RS03055;Dbxref=GenBank:WP_002439753.1;Name=WP_002439753.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497879.1;locus_tag=CP553_RS03055;product=ABC transporter ATP-binding protein;protein_id=WP_002439753.1;transl_table=11
NZ_PCFD01000005.1	RefSeq	pseudogene	101057	101156	.	+	.	ID=gene-CP553_RS03060;Name=CP553_RS03060;end_range=101156,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS03060;old_locus_tag=CP553_03160;partial=true;pseudo=true
NZ_PCFD01000005.1	Protein Homology	CDS	101057	101156	.	+	0	ID=cds-CP553_RS03060;Parent=gene-CP553_RS03060;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=101156,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499960.1;locus_tag=CP553_RS03060;partial=true;product=thymidylate synthase;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000006.1 1 96506
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000006.1	RefSeq	region	1	96506	.	+	.	ID=NZ_PCFD01000006.1:1..96506;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000006.1	RefSeq	pseudogene	1	104	.	-	.	ID=gene-CP553_RS12740;Name=CP553_RS12740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12740;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000006.1	Protein Homology	CDS	1	104	.	-	0	ID=cds-CP553_RS12740;Parent=gene-CP553_RS12740;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501337.1;locus_tag=CP553_RS12740;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	676	2649	.	+	.	ID=gene-CP553_RS03065;Name=CP553_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03065;old_locus_tag=CP553_03165
NZ_PCFD01000006.1	Protein Homology	CDS	676	2649	.	+	0	ID=cds-WP_002438477.1;Parent=gene-CP553_RS03065;Dbxref=GenBank:WP_002438477.1;Name=WP_002438477.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476244.1;locus_tag=CP553_RS03065;product=AraC family transcriptional regulator;protein_id=WP_002438477.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	2688	3416	.	+	.	ID=gene-CP553_RS03070;Name=CP553_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03070;old_locus_tag=CP553_03170
NZ_PCFD01000006.1	Protein Homology	CDS	2688	3416	.	+	0	ID=cds-WP_002438479.1;Parent=gene-CP553_RS03070;Dbxref=GenBank:WP_002438479.1;Name=WP_002438479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438479.1;locus_tag=CP553_RS03070;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_002438479.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	3452	3775	.	+	.	ID=gene-CP553_RS03075;Name=CP553_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03075;old_locus_tag=CP553_03175
NZ_PCFD01000006.1	Protein Homology	CDS	3452	3775	.	+	0	ID=cds-WP_001832425.1;Parent=gene-CP553_RS03075;Dbxref=GenBank:WP_001832425.1;Name=WP_001832425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487083.1;locus_tag=CP553_RS03075;product=PH domain-containing protein;protein_id=WP_001832425.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	4180	4524	.	+	.	ID=gene-CP553_RS03080;Name=CP553_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03080;old_locus_tag=CP553_03180
NZ_PCFD01000006.1	Protein Homology	CDS	4180	4524	.	+	0	ID=cds-WP_001832412.1;Parent=gene-CP553_RS03080;Dbxref=GenBank:WP_001832412.1;Name=WP_001832412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832412.1;locus_tag=CP553_RS03080;product=SarA family transcriptional regulator;protein_id=WP_001832412.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	4629	5465	.	-	.	ID=gene-CP553_RS03085;Name=CP553_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03085;old_locus_tag=CP553_03185
NZ_PCFD01000006.1	Protein Homology	CDS	4629	5465	.	-	0	ID=cds-WP_001832418.1;Parent=gene-CP553_RS03085;Dbxref=GenBank:WP_001832418.1;Name=WP_001832418.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832418.1;locus_tag=CP553_RS03085;product=urease accessory protein UreD;protein_id=WP_001832418.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	5465	6079	.	-	.	ID=gene-CP553_RS03090;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=CP553_RS03090;old_locus_tag=CP553_03190
NZ_PCFD01000006.1	Protein Homology	CDS	5465	6079	.	-	0	ID=cds-WP_001832410.1;Parent=gene-CP553_RS03090;Dbxref=GenBank:WP_001832410.1;Name=WP_001832410.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501025.1;locus_tag=CP553_RS03090;product=urease accessory protein UreG;protein_id=WP_001832410.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	6092	6781	.	-	.	ID=gene-CP553_RS03095;Name=CP553_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03095;old_locus_tag=CP553_03195
NZ_PCFD01000006.1	Protein Homology	CDS	6092	6781	.	-	0	ID=cds-WP_001832407.1;Parent=gene-CP553_RS03095;Dbxref=GenBank:WP_001832407.1;Name=WP_001832407.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501024.1;locus_tag=CP553_RS03095;product=urease accessory protein UreF;protein_id=WP_001832407.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	6774	7226	.	-	.	ID=gene-CP553_RS03100;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=CP553_RS03100;old_locus_tag=CP553_03200
NZ_PCFD01000006.1	Protein Homology	CDS	6774	7226	.	-	0	ID=cds-WP_001832382.1;Parent=gene-CP553_RS03100;Dbxref=GenBank:WP_001832382.1;Name=WP_001832382.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501023.1;locus_tag=CP553_RS03100;product=urease accessory protein UreE;protein_id=WP_001832382.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	7240	8955	.	-	.	ID=gene-CP553_RS03105;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=CP553_RS03105;old_locus_tag=CP553_03205
NZ_PCFD01000006.1	Protein Homology	CDS	7240	8955	.	-	0	ID=cds-WP_001832399.1;Parent=gene-CP553_RS03105;Dbxref=GenBank:WP_001832399.1;Name=WP_001832399.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447295.1;locus_tag=CP553_RS03105;product=urease subunit alpha;protein_id=WP_001832399.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	8958	9359	.	-	.	ID=gene-CP553_RS03110;Name=CP553_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03110;old_locus_tag=CP553_03210
NZ_PCFD01000006.1	Protein Homology	CDS	8958	9359	.	-	0	ID=cds-WP_001832383.1;Parent=gene-CP553_RS03110;Dbxref=GenBank:WP_001832383.1;Name=WP_001832383.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113463.1;locus_tag=CP553_RS03110;product=urease subunit beta;protein_id=WP_001832383.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	9373	9675	.	-	.	ID=gene-CP553_RS03115;Name=CP553_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03115;old_locus_tag=CP553_03215
NZ_PCFD01000006.1	Protein Homology	CDS	9373	9675	.	-	0	ID=cds-WP_001832402.1;Parent=gene-CP553_RS03115;Dbxref=GenBank:WP_001832402.1;Name=WP_001832402.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832402.1;locus_tag=CP553_RS03115;product=urease subunit gamma;protein_id=WP_001832402.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	9943	10845	.	+	.	ID=gene-CP553_RS03120;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=CP553_RS03120;old_locus_tag=CP553_03220
NZ_PCFD01000006.1	Protein Homology	CDS	9943	10845	.	+	0	ID=cds-WP_001832405.1;Parent=gene-CP553_RS03120;Dbxref=GenBank:WP_001832405.1;Name=WP_001832405.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502156.1;locus_tag=CP553_RS03120;product=urea transporter;protein_id=WP_001832405.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	11278	12420	.	+	.	ID=gene-CP553_RS03125;Name=CP553_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03125;old_locus_tag=CP553_03225
NZ_PCFD01000006.1	Protein Homology	CDS	11278	12420	.	+	0	ID=cds-WP_197315229.1;Parent=gene-CP553_RS03125;Dbxref=GenBank:WP_197315229.1;Name=WP_197315229.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498556.1;locus_tag=CP553_RS03125;product=acyl-CoA dehydrogenase family protein;protein_id=WP_197315229.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	12739	13680	.	+	.	ID=gene-CP553_RS03130;Name=CP553_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03130;old_locus_tag=CP553_03230
NZ_PCFD01000006.1	Protein Homology	CDS	12739	13680	.	+	0	ID=cds-WP_002438493.1;Parent=gene-CP553_RS03130;Dbxref=GenBank:WP_002438493.1;Name=WP_002438493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485393.1;locus_tag=CP553_RS03130;product=nucleoside hydrolase;protein_id=WP_002438493.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	13790	14338	.	+	.	ID=gene-CP553_RS03135;Name=CP553_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03135;old_locus_tag=CP553_03235
NZ_PCFD01000006.1	Protein Homology	CDS	13790	14338	.	+	0	ID=cds-WP_001832423.1;Parent=gene-CP553_RS03135;Dbxref=GenBank:WP_001832423.1;Name=WP_001832423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467778.1;locus_tag=CP553_RS03135;product=biotin transporter BioY;protein_id=WP_001832423.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	14375	15130	.	+	.	ID=gene-CP553_RS03140;Name=CP553_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03140;old_locus_tag=CP553_03240
NZ_PCFD01000006.1	Protein Homology	CDS	14375	15130	.	+	0	ID=cds-WP_002438495.1;Parent=gene-CP553_RS03140;Dbxref=GenBank:WP_002438495.1;Name=WP_002438495.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498558.1;locus_tag=CP553_RS03140;product=GNAT family N-acetyltransferase;protein_id=WP_002438495.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	pseudogene	15251	16032	.	-	.	ID=gene-CP553_RS03145;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=pseudogene;locus_tag=CP553_RS03145;pseudo=true
NZ_PCFD01000006.1	Protein Homology	CDS	15251	16032	.	-	0	ID=cds-CP553_RS03145;Parent=gene-CP553_RS03145;Note=frameshifted%3B internal stop;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457959.1;locus_tag=CP553_RS03145;product=formate dehydrogenase accessory sulfurtransferase FdhD;pseudo=true;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	16251	17036	.	+	.	ID=gene-CP553_RS03150;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=CP553_RS03150;old_locus_tag=CP553_03255
NZ_PCFD01000006.1	Protein Homology	CDS	16251	17036	.	+	0	ID=cds-WP_002438502.1;Parent=gene-CP553_RS03150;Dbxref=GenBank:WP_002438502.1;Name=WP_002438502.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500629.1;locus_tag=CP553_RS03150;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_002438502.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	17050	17721	.	+	.	ID=gene-CP553_RS03155;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=CP553_RS03155;old_locus_tag=CP553_03260
NZ_PCFD01000006.1	Protein Homology	CDS	17050	17721	.	+	0	ID=cds-WP_002438504.1;Parent=gene-CP553_RS03155;Dbxref=GenBank:WP_002438504.1;Name=WP_002438504.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501010.1;locus_tag=CP553_RS03155;product=molybdate ABC transporter permease subunit;protein_id=WP_002438504.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	17722	18342	.	+	.	ID=gene-CP553_RS03160;Name=CP553_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03160;old_locus_tag=CP553_03265
NZ_PCFD01000006.1	Protein Homology	CDS	17722	18342	.	+	0	ID=cds-WP_002438505.1;Parent=gene-CP553_RS03160;Dbxref=GenBank:WP_002438505.1;Name=WP_002438505.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495564.1;locus_tag=CP553_RS03160;product=ATP-binding cassette domain-containing protein;protein_id=WP_002438505.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	18418	19419	.	+	.	ID=gene-CP553_RS03165;Name=CP553_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03165;old_locus_tag=CP553_03270
NZ_PCFD01000006.1	Protein Homology	CDS	18418	19419	.	+	0	ID=cds-WP_002438506.1;Parent=gene-CP553_RS03165;Dbxref=GenBank:WP_002438506.1;Name=WP_002438506.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465120.1;locus_tag=CP553_RS03165;product=ThiF family adenylyltransferase;protein_id=WP_002438506.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	19440	19970	.	+	.	ID=gene-CP553_RS03170;Name=CP553_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03170;old_locus_tag=CP553_03275
NZ_PCFD01000006.1	Protein Homology	CDS	19440	19970	.	+	0	ID=cds-WP_002438508.1;Parent=gene-CP553_RS03170;Dbxref=GenBank:WP_002438508.1;Name=WP_002438508.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438508.1;locus_tag=CP553_RS03170;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_002438508.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	20031	20519	.	-	.	ID=gene-CP553_RS03175;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=CP553_RS03175;old_locus_tag=CP553_03280
NZ_PCFD01000006.1	Protein Homology	CDS	20031	20519	.	-	0	ID=cds-WP_002438509.1;Parent=gene-CP553_RS03175;Dbxref=GenBank:WP_002438509.1;Name=WP_002438509.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113722.1;locus_tag=CP553_RS03175;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_002438509.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	20581	21840	.	+	.	ID=gene-CP553_RS03180;Name=CP553_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03180;old_locus_tag=CP553_03285
NZ_PCFD01000006.1	Protein Homology	CDS	20581	21840	.	+	0	ID=cds-WP_002456088.1;Parent=gene-CP553_RS03180;Dbxref=GenBank:WP_002456088.1;Name=WP_002456088.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457954.1;locus_tag=CP553_RS03180;product=molybdopterin molybdotransferase MoeA;protein_id=WP_002456088.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	21837	22313	.	+	.	ID=gene-CP553_RS03185;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=CP553_RS03185;old_locus_tag=CP553_03290
NZ_PCFD01000006.1	Protein Homology	CDS	21837	22313	.	+	0	ID=cds-WP_002438514.1;Parent=gene-CP553_RS03185;Dbxref=GenBank:WP_002438514.1;Name=WP_002438514.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496186.1;locus_tag=CP553_RS03185;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_002438514.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	22314	22766	.	+	.	ID=gene-CP553_RS03190;Name=CP553_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03190;old_locus_tag=CP553_03295
NZ_PCFD01000006.1	Protein Homology	CDS	22314	22766	.	+	0	ID=cds-WP_002438516.1;Parent=gene-CP553_RS03190;Dbxref=GenBank:WP_002438516.1;Name=WP_002438516.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447312.1;locus_tag=CP553_RS03190;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_002438516.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	22763	22996	.	+	.	ID=gene-CP553_RS03195;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=CP553_RS03195;old_locus_tag=CP553_03300
NZ_PCFD01000006.1	Protein Homology	CDS	22763	22996	.	+	0	ID=cds-WP_002438518.1;Parent=gene-CP553_RS03195;Dbxref=GenBank:WP_002438518.1;Name=WP_002438518.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832421.1;locus_tag=CP553_RS03195;product=molybdopterin converting factor subunit 1;protein_id=WP_002438518.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	23002	23607	.	+	.	ID=gene-CP553_RS03200;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=CP553_RS03200;old_locus_tag=CP553_03305
NZ_PCFD01000006.1	Protein Homology	CDS	23002	23607	.	+	0	ID=cds-WP_001832403.1;Parent=gene-CP553_RS03200;Dbxref=GenBank:WP_001832403.1;Name=WP_001832403.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499564.1;locus_tag=CP553_RS03200;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001832403.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	23620	24642	.	+	.	ID=gene-CP553_RS03205;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=CP553_RS03205;old_locus_tag=CP553_03310
NZ_PCFD01000006.1	Protein Homology	CDS	23620	24642	.	+	0	ID=cds-WP_002438521.1;Parent=gene-CP553_RS03205;Dbxref=GenBank:WP_002438521.1;Name=WP_002438521.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501000.1;locus_tag=CP553_RS03205;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_002438521.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	25044	25394	.	+	.	ID=gene-CP553_RS03210;Name=CP553_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03210;old_locus_tag=CP553_03315
NZ_PCFD01000006.1	Protein Homology	CDS	25044	25394	.	+	0	ID=cds-WP_001832414.1;Parent=gene-CP553_RS03210;Dbxref=GenBank:WP_001832414.1;Name=WP_001832414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500996.1;locus_tag=CP553_RS03210;product=SarA family transcriptional regulator;protein_id=WP_001832414.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	pseudogene	25391	25772	.	-	.	ID=gene-CP553_RS03215;Name=CP553_RS03215;end_range=25772,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS03215;old_locus_tag=CP553_03320;partial=true;pseudo=true
NZ_PCFD01000006.1	Protein Homology	CDS	25391	25772	.	-	0	ID=cds-CP553_RS03215;Parent=gene-CP553_RS03215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=25772,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082549.1;locus_tag=CP553_RS03215;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_PCFD01000006.1	RefSeq	pseudogene	25807	25983	.	-	.	ID=gene-CP553_RS03220;Name=CP553_RS03220;end_range=25983,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS03220;old_locus_tag=CP553_03325;partial=true;pseudo=true;start_range=.,25807
NZ_PCFD01000006.1	Protein Homology	CDS	25807	25983	.	-	0	ID=cds-CP553_RS03220;Parent=gene-CP553_RS03220;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=25983,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000277741.1;locus_tag=CP553_RS03220;partial=true;product=transposase;pseudo=true;start_range=.,25807;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	26260	27453	.	-	.	ID=gene-CP553_RS03225;Name=CP553_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03225;old_locus_tag=CP553_03330
NZ_PCFD01000006.1	Protein Homology	CDS	26260	27453	.	-	0	ID=cds-WP_002438524.1;Parent=gene-CP553_RS03225;Dbxref=GenBank:WP_002438524.1;Name=WP_002438524.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503707.1;locus_tag=CP553_RS03225;product=MFS transporter;protein_id=WP_002438524.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	27453	27893	.	-	.	ID=gene-CP553_RS03230;Name=CP553_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03230;old_locus_tag=CP553_03335
NZ_PCFD01000006.1	Protein Homology	CDS	27453	27893	.	-	0	ID=cds-WP_001829772.1;Parent=gene-CP553_RS03230;Dbxref=GenBank:WP_001829772.1;Name=WP_001829772.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496191.1;locus_tag=CP553_RS03230;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001829772.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	28056	28817	.	+	.	ID=gene-CP553_RS03235;Name=CP553_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03235;old_locus_tag=CP553_03340
NZ_PCFD01000006.1	Protein Homology	CDS	28056	28817	.	+	0	ID=cds-WP_002456089.1;Parent=gene-CP553_RS03235;Dbxref=GenBank:WP_002456089.1;Name=WP_002456089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368278.1;locus_tag=CP553_RS03235;product=VOC family protein;protein_id=WP_002456089.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	28814	29065	.	-	.	ID=gene-CP553_RS12745;Name=CP553_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12745
NZ_PCFD01000006.1	Protein Homology	CDS	28814	29065	.	-	0	ID=cds-WP_002957803.1;Parent=gene-CP553_RS12745;Dbxref=GenBank:WP_002957803.1;Name=WP_002957803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014373889.1;locus_tag=CP553_RS12745;product=hypothetical protein;protein_id=WP_002957803.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	29217	30467	.	+	.	ID=gene-CP553_RS03240;Name=CP553_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03240;old_locus_tag=CP553_03345
NZ_PCFD01000006.1	Protein Homology	CDS	29217	30467	.	+	0	ID=cds-WP_002438530.1;Parent=gene-CP553_RS03240;Dbxref=GenBank:WP_002438530.1;Name=WP_002438530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500991.1;locus_tag=CP553_RS03240;product=lipid II:glycine glycyltransferase FemX;protein_id=WP_002438530.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	30544	33699	.	+	.	ID=gene-CP553_RS03245;Name=CP553_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03245;old_locus_tag=CP553_03350
NZ_PCFD01000006.1	Protein Homology	CDS	30544	33699	.	+	0	ID=cds-WP_001829753.1;Parent=gene-CP553_RS03245;Dbxref=GenBank:WP_001829753.1;Name=WP_001829753.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360201.1;locus_tag=CP553_RS03245;product=efflux RND transporter permease subunit;protein_id=WP_001829753.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	33750	34067	.	-	.	ID=gene-CP553_RS03250;Name=mspA;gbkey=Gene;gene=mspA;gene_biotype=protein_coding;locus_tag=CP553_RS03250;old_locus_tag=CP553_03355
NZ_PCFD01000006.1	Protein Homology	CDS	33750	34067	.	-	0	ID=cds-WP_002438539.1;Parent=gene-CP553_RS03250;Dbxref=GenBank:WP_002438539.1;Name=WP_002438539.1;gbkey=CDS;gene=mspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113631.1;locus_tag=CP553_RS03250;product=membrane stabilizing protein MspA;protein_id=WP_002438539.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	34359	34529	.	-	.	ID=gene-CP553_RS03255;Name=CP553_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03255;old_locus_tag=CP553_03360
NZ_PCFD01000006.1	Protein Homology	CDS	34359	34529	.	-	0	ID=cds-WP_002438541.1;Parent=gene-CP553_RS03255;Dbxref=GenBank:WP_002438541.1;Name=WP_002438541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447321.1;locus_tag=CP553_RS03255;product=SE1832 family protein;protein_id=WP_002438541.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	34671	35579	.	+	.	ID=gene-CP553_RS03260;Name=CP553_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03260;old_locus_tag=CP553_03365
NZ_PCFD01000006.1	Protein Homology	CDS	34671	35579	.	+	0	ID=cds-WP_001829745.1;Parent=gene-CP553_RS03260;Dbxref=GenBank:WP_001829745.1;Name=WP_001829745.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487080.1;locus_tag=CP553_RS03260;product=AEC family transporter;protein_id=WP_001829745.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	35774	36565	.	-	.	ID=gene-CP553_RS03265;Name=CP553_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03265;old_locus_tag=CP553_03370
NZ_PCFD01000006.1	Protein Homology	CDS	35774	36565	.	-	0	ID=cds-WP_001829726.1;Parent=gene-CP553_RS03265;Dbxref=GenBank:WP_001829726.1;Name=WP_001829726.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829726.1;locus_tag=CP553_RS03265;product=glucose 1-dehydrogenase;protein_id=WP_001829726.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	36593	37456	.	-	.	ID=gene-CP553_RS03270;Name=CP553_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03270;old_locus_tag=CP553_03375
NZ_PCFD01000006.1	Protein Homology	CDS	36593	37456	.	-	0	ID=cds-WP_001829716.1;Parent=gene-CP553_RS03270;Dbxref=GenBank:WP_001829716.1;Name=WP_001829716.1;Ontology_term=GO:0034219,GO:0015144,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500985.1;locus_tag=CP553_RS03270;product=GRP family sugar transporter;protein_id=WP_001829716.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	37747	39882	.	+	.	ID=gene-CP553_RS03275;Name=CP553_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03275;old_locus_tag=CP553_03380
NZ_PCFD01000006.1	Protein Homology	CDS	37747	39882	.	+	0	ID=cds-WP_001829767.1;Parent=gene-CP553_RS03275;Dbxref=GenBank:WP_001829767.1;Name=WP_001829767.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475810.1;locus_tag=CP553_RS03275;product=DNA topoisomerase III;protein_id=WP_001829767.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	39995	41329	.	+	.	ID=gene-CP553_RS03280;Name=CP553_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03280;old_locus_tag=CP553_03385
NZ_PCFD01000006.1	Protein Homology	CDS	39995	41329	.	+	0	ID=cds-WP_001829757.1;Parent=gene-CP553_RS03280;Dbxref=GenBank:WP_001829757.1;Name=WP_001829757.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447326.1;locus_tag=CP553_RS03280;product=NCS2 family permease;protein_id=WP_001829757.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	41386	41784	.	-	.	ID=gene-CP553_RS03285;Name=CP553_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03285;old_locus_tag=CP553_03390
NZ_PCFD01000006.1	Protein Homology	CDS	41386	41784	.	-	0	ID=cds-WP_001829776.1;Parent=gene-CP553_RS03285;Dbxref=GenBank:WP_001829776.1;Name=WP_001829776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467751.1;locus_tag=CP553_RS03285;product=hypothetical protein;protein_id=WP_001829776.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	42140	42448	.	+	.	ID=gene-CP553_RS03290;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=CP553_RS03290;old_locus_tag=CP553_03395
NZ_PCFD01000006.1	Protein Homology	CDS	42140	42448	.	+	0	ID=cds-WP_001118666.1;Parent=gene-CP553_RS03290;Dbxref=GenBank:WP_001118666.1;Name=WP_001118666.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=CP553_RS03290;product=30S ribosomal protein S10;protein_id=WP_001118666.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	42476	43141	.	+	.	ID=gene-CP553_RS03295;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=CP553_RS03295;old_locus_tag=CP553_03400
NZ_PCFD01000006.1	Protein Homology	CDS	42476	43141	.	+	0	ID=cds-WP_070729414.1;Parent=gene-CP553_RS03295;Dbxref=GenBank:WP_070729414.1;Name=WP_070729414.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479571.1;locus_tag=CP553_RS03295;product=50S ribosomal protein L3;protein_id=WP_070729414.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	43166	43789	.	+	.	ID=gene-CP553_RS03300;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=CP553_RS03300;old_locus_tag=CP553_03405
NZ_PCFD01000006.1	Protein Homology	CDS	43166	43789	.	+	0	ID=cds-WP_001829775.1;Parent=gene-CP553_RS03300;Dbxref=GenBank:WP_001829775.1;Name=WP_001829775.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467756.1;locus_tag=CP553_RS03300;product=50S ribosomal protein L4;protein_id=WP_001829775.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	43789	44064	.	+	.	ID=gene-CP553_RS03305;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=CP553_RS03305;old_locus_tag=CP553_03410
NZ_PCFD01000006.1	Protein Homology	CDS	43789	44064	.	+	0	ID=cds-WP_001829755.1;Parent=gene-CP553_RS03305;Dbxref=GenBank:WP_001829755.1;Name=WP_001829755.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506966.1;locus_tag=CP553_RS03305;product=50S ribosomal protein L23;protein_id=WP_001829755.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	44093	44926	.	+	.	ID=gene-CP553_RS03310;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=CP553_RS03310;old_locus_tag=CP553_03415
NZ_PCFD01000006.1	Protein Homology	CDS	44093	44926	.	+	0	ID=cds-WP_001829788.1;Parent=gene-CP553_RS03310;Dbxref=GenBank:WP_001829788.1;Name=WP_001829788.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500976.1;locus_tag=CP553_RS03310;product=50S ribosomal protein L2;protein_id=WP_001829788.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	44993	45271	.	+	.	ID=gene-CP553_RS03315;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=CP553_RS03315;old_locus_tag=CP553_03420
NZ_PCFD01000006.1	Protein Homology	CDS	44993	45271	.	+	0	ID=cds-WP_001829710.1;Parent=gene-CP553_RS03315;Dbxref=GenBank:WP_001829710.1;Name=WP_001829710.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=CP553_RS03315;product=30S ribosomal protein S19;protein_id=WP_001829710.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	45299	45652	.	+	.	ID=gene-CP553_RS03320;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=CP553_RS03320;old_locus_tag=CP553_03425
NZ_PCFD01000006.1	Protein Homology	CDS	45299	45652	.	+	0	ID=cds-WP_001829734.1;Parent=gene-CP553_RS03320;Dbxref=GenBank:WP_001829734.1;Name=WP_001829734.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1;locus_tag=CP553_RS03320;product=50S ribosomal protein L22;protein_id=WP_001829734.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	45676	46329	.	+	.	ID=gene-CP553_RS03325;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=CP553_RS03325;old_locus_tag=CP553_03430
NZ_PCFD01000006.1	Protein Homology	CDS	45676	46329	.	+	0	ID=cds-WP_001829791.1;Parent=gene-CP553_RS03325;Dbxref=GenBank:WP_001829791.1;Name=WP_001829791.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500973.1;locus_tag=CP553_RS03325;product=30S ribosomal protein S3;protein_id=WP_001829791.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	46332	46766	.	+	.	ID=gene-CP553_RS03330;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=CP553_RS03330;old_locus_tag=CP553_03435
NZ_PCFD01000006.1	Protein Homology	CDS	46332	46766	.	+	0	ID=cds-WP_001829782.1;Parent=gene-CP553_RS03330;Dbxref=GenBank:WP_001829782.1;Name=WP_001829782.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1;locus_tag=CP553_RS03330;product=50S ribosomal protein L16;protein_id=WP_001829782.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	46756	46965	.	+	.	ID=gene-CP553_RS03335;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=CP553_RS03335;old_locus_tag=CP553_03440
NZ_PCFD01000006.1	Protein Homology	CDS	46756	46965	.	+	0	ID=cds-WP_000644737.1;Parent=gene-CP553_RS03335;Dbxref=GenBank:WP_000644737.1;Name=WP_000644737.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509269.1;locus_tag=CP553_RS03335;product=50S ribosomal protein L29;protein_id=WP_000644737.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	46990	47253	.	+	.	ID=gene-CP553_RS03340;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=CP553_RS03340;old_locus_tag=CP553_03445
NZ_PCFD01000006.1	Protein Homology	CDS	46990	47253	.	+	0	ID=cds-WP_001829723.1;Parent=gene-CP553_RS03340;Dbxref=GenBank:WP_001829723.1;Name=WP_001829723.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=CP553_RS03340;product=30S ribosomal protein S17;protein_id=WP_001829723.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	47284	47652	.	+	.	ID=gene-CP553_RS03345;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=CP553_RS03345;old_locus_tag=CP553_03450
NZ_PCFD01000006.1	Protein Homology	CDS	47284	47652	.	+	0	ID=cds-WP_001829742.1;Parent=gene-CP553_RS03345;Dbxref=GenBank:WP_001829742.1;Name=WP_001829742.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=CP553_RS03345;product=50S ribosomal protein L14;protein_id=WP_001829742.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	47694	48011	.	+	.	ID=gene-CP553_RS03350;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=CP553_RS03350;old_locus_tag=CP553_03455
NZ_PCFD01000006.1	Protein Homology	CDS	47694	48011	.	+	0	ID=cds-WP_001829762.1;Parent=gene-CP553_RS03350;Dbxref=GenBank:WP_001829762.1;Name=WP_001829762.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500968.1;locus_tag=CP553_RS03350;product=50S ribosomal protein L24;protein_id=WP_001829762.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	48037	48576	.	+	.	ID=gene-CP553_RS03355;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=CP553_RS03355;old_locus_tag=CP553_03460
NZ_PCFD01000006.1	Protein Homology	CDS	48037	48576	.	+	0	ID=cds-WP_001829778.1;Parent=gene-CP553_RS03355;Dbxref=GenBank:WP_001829778.1;Name=WP_001829778.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275133.1;locus_tag=CP553_RS03355;product=50S ribosomal protein L5;protein_id=WP_001829778.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	48599	48784	.	+	.	ID=gene-CP553_RS03360;Name=CP553_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03360;old_locus_tag=CP553_03465
NZ_PCFD01000006.1	Protein Homology	CDS	48599	48784	.	+	0	ID=cds-WP_001829713.1;Parent=gene-CP553_RS03360;Dbxref=GenBank:WP_001829713.1;Name=WP_001829713.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=CP553_RS03360;product=type Z 30S ribosomal protein S14;protein_id=WP_001829713.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	48815	49213	.	+	.	ID=gene-CP553_RS03365;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=CP553_RS03365;old_locus_tag=CP553_03470
NZ_PCFD01000006.1	Protein Homology	CDS	48815	49213	.	+	0	ID=cds-WP_001829768.1;Parent=gene-CP553_RS03365;Dbxref=GenBank:WP_001829768.1;Name=WP_001829768.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=CP553_RS03365;product=30S ribosomal protein S8;protein_id=WP_001829768.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	49238	49774	.	+	.	ID=gene-CP553_RS03370;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=CP553_RS03370;old_locus_tag=CP553_03475
NZ_PCFD01000006.1	Protein Homology	CDS	49238	49774	.	+	0	ID=cds-WP_001829740.1;Parent=gene-CP553_RS03370;Dbxref=GenBank:WP_001829740.1;Name=WP_001829740.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829740.1;locus_tag=CP553_RS03370;product=50S ribosomal protein L6;protein_id=WP_001829740.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	49806	50168	.	+	.	ID=gene-CP553_RS03375;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=CP553_RS03375;old_locus_tag=CP553_03480
NZ_PCFD01000006.1	Protein Homology	CDS	49806	50168	.	+	0	ID=cds-WP_001829747.1;Parent=gene-CP553_RS03375;Dbxref=GenBank:WP_001829747.1;Name=WP_001829747.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275136.1;locus_tag=CP553_RS03375;product=50S ribosomal protein L18;protein_id=WP_001829747.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	50188	50688	.	+	.	ID=gene-CP553_RS03380;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=CP553_RS03380;old_locus_tag=CP553_03485
NZ_PCFD01000006.1	Protein Homology	CDS	50188	50688	.	+	0	ID=cds-WP_001829701.1;Parent=gene-CP553_RS03380;Dbxref=GenBank:WP_001829701.1;Name=WP_001829701.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426364.1;locus_tag=CP553_RS03380;product=30S ribosomal protein S5;protein_id=WP_001829701.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	50705	50887	.	+	.	ID=gene-CP553_RS03385;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=CP553_RS03385;old_locus_tag=CP553_03490
NZ_PCFD01000006.1	Protein Homology	CDS	50705	50887	.	+	0	ID=cds-WP_001829711.1;Parent=gene-CP553_RS03385;Dbxref=GenBank:WP_001829711.1;Name=WP_001829711.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829711.1;locus_tag=CP553_RS03385;product=50S ribosomal protein L30;protein_id=WP_001829711.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	50904	51344	.	+	.	ID=gene-CP553_RS03390;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=CP553_RS03390;old_locus_tag=CP553_03495
NZ_PCFD01000006.1	Protein Homology	CDS	50904	51344	.	+	0	ID=cds-WP_001829796.1;Parent=gene-CP553_RS03390;Dbxref=GenBank:WP_001829796.1;Name=WP_001829796.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500960.1;locus_tag=CP553_RS03390;product=50S ribosomal protein L15;protein_id=WP_001829796.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	51344	52636	.	+	.	ID=gene-CP553_RS03395;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=CP553_RS03395;old_locus_tag=CP553_03500
NZ_PCFD01000006.1	Protein Homology	CDS	51344	52636	.	+	0	ID=cds-WP_001829707.1;Parent=gene-CP553_RS03395;Dbxref=GenBank:WP_001829707.1;Name=WP_001829707.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500959.1;locus_tag=CP553_RS03395;product=preprotein translocase subunit SecY;protein_id=WP_001829707.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	52654	53301	.	+	.	ID=gene-CP553_RS03400;Name=CP553_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03400;old_locus_tag=CP553_03505
NZ_PCFD01000006.1	Protein Homology	CDS	52654	53301	.	+	0	ID=cds-WP_001829774.1;Parent=gene-CP553_RS03400;Dbxref=GenBank:WP_001829774.1;Name=WP_001829774.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500958.1;locus_tag=CP553_RS03400;product=adenylate kinase;protein_id=WP_001829774.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	53489	53707	.	+	.	ID=gene-CP553_RS03405;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=CP553_RS03405;old_locus_tag=CP553_03510
NZ_PCFD01000006.1	Protein Homology	CDS	53489	53707	.	+	0	ID=cds-WP_001829792.1;Parent=gene-CP553_RS03405;Dbxref=GenBank:WP_001829792.1;Name=WP_001829792.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720929.1;locus_tag=CP553_RS03405;product=translation initiation factor IF-1;protein_id=WP_001829792.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	53739	53852	.	+	.	ID=gene-CP553_RS03410;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=CP553_RS03410;old_locus_tag=CP553_03515
NZ_PCFD01000006.1	Protein Homology	CDS	53739	53852	.	+	0	ID=cds-WP_001829709.1;Parent=gene-CP553_RS03410;Dbxref=GenBank:WP_001829709.1;Name=WP_001829709.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=CP553_RS03410;product=50S ribosomal protein L36;protein_id=WP_001829709.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	53875	54240	.	+	.	ID=gene-CP553_RS03415;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=CP553_RS03415;old_locus_tag=CP553_03520
NZ_PCFD01000006.1	Protein Homology	CDS	53875	54240	.	+	0	ID=cds-WP_001829703.1;Parent=gene-CP553_RS03415;Dbxref=GenBank:WP_001829703.1;Name=WP_001829703.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=CP553_RS03415;product=30S ribosomal protein S13;protein_id=WP_001829703.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	54263	54652	.	+	.	ID=gene-CP553_RS03420;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=CP553_RS03420;old_locus_tag=CP553_03525
NZ_PCFD01000006.1	Protein Homology	CDS	54263	54652	.	+	0	ID=cds-WP_001829725.1;Parent=gene-CP553_RS03420;Dbxref=GenBank:WP_001829725.1;Name=WP_001829725.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998822.1;locus_tag=CP553_RS03420;product=30S ribosomal protein S11;protein_id=WP_001829725.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	54729	55673	.	+	.	ID=gene-CP553_RS03425;Name=CP553_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03425;old_locus_tag=CP553_03530
NZ_PCFD01000006.1	Protein Homology	CDS	54729	55673	.	+	0	ID=cds-WP_001829787.1;Parent=gene-CP553_RS03425;Dbxref=GenBank:WP_001829787.1;Name=WP_001829787.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302606.1;locus_tag=CP553_RS03425;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001829787.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	55690	56058	.	+	.	ID=gene-CP553_RS03430;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=CP553_RS03430;old_locus_tag=CP553_03535
NZ_PCFD01000006.1	Protein Homology	CDS	55690	56058	.	+	0	ID=cds-WP_001829718.1;Parent=gene-CP553_RS03430;Dbxref=GenBank:WP_001829718.1;Name=WP_001829718.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450507.1;locus_tag=CP553_RS03430;product=50S ribosomal protein L17;protein_id=WP_001829718.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	56389	57198	.	+	.	ID=gene-CP553_RS03435;Name=CP553_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03435;old_locus_tag=CP553_03540
NZ_PCFD01000006.1	Protein Homology	CDS	56389	57198	.	+	0	ID=cds-WP_001829728.1;Parent=gene-CP553_RS03435;Dbxref=GenBank:WP_001829728.1;Name=WP_001829728.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469356.1;locus_tag=CP553_RS03435;product=energy-coupling factor transporter ATPase;protein_id=WP_001829728.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	57195	58055	.	+	.	ID=gene-CP553_RS03440;Name=CP553_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03440;old_locus_tag=CP553_03545
NZ_PCFD01000006.1	Protein Homology	CDS	57195	58055	.	+	0	ID=cds-WP_001829765.1;Parent=gene-CP553_RS03440;Dbxref=GenBank:WP_001829765.1;Name=WP_001829765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456988.1;locus_tag=CP553_RS03440;product=energy-coupling factor transporter ATPase;protein_id=WP_001829765.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	58045	58851	.	+	.	ID=gene-CP553_RS03445;Name=CP553_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03445;old_locus_tag=CP553_03550
NZ_PCFD01000006.1	Protein Homology	CDS	58045	58851	.	+	0	ID=cds-WP_001829702.1;Parent=gene-CP553_RS03445;Dbxref=GenBank:WP_001829702.1;Name=WP_001829702.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447338.1;locus_tag=CP553_RS03445;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_001829702.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	58855	59658	.	+	.	ID=gene-CP553_RS03450;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=CP553_RS03450;old_locus_tag=CP553_03555
NZ_PCFD01000006.1	Protein Homology	CDS	58855	59658	.	+	0	ID=cds-WP_001829771.1;Parent=gene-CP553_RS03450;Dbxref=GenBank:WP_001829771.1;Name=WP_001829771.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456990.1;locus_tag=CP553_RS03450;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_001829771.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	59919	60356	.	+	.	ID=gene-CP553_RS03455;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=CP553_RS03455;old_locus_tag=CP553_03560
NZ_PCFD01000006.1	Protein Homology	CDS	59919	60356	.	+	0	ID=cds-WP_001829751.1;Parent=gene-CP553_RS03455;Dbxref=GenBank:WP_001829751.1;Name=WP_001829751.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468667.1;locus_tag=CP553_RS03455;product=50S ribosomal protein L13;protein_id=WP_001829751.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	60376	60768	.	+	.	ID=gene-CP553_RS03460;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=CP553_RS03460;old_locus_tag=CP553_03565
NZ_PCFD01000006.1	Protein Homology	CDS	60376	60768	.	+	0	ID=cds-WP_001829714.1;Parent=gene-CP553_RS03460;Dbxref=GenBank:WP_001829714.1;Name=WP_001829714.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1;locus_tag=CP553_RS03460;product=30S ribosomal protein S9;protein_id=WP_001829714.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	61031	61771	.	-	.	ID=gene-CP553_RS03465;Name=CP553_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03465;old_locus_tag=CP553_03570
NZ_PCFD01000006.1	Protein Homology	CDS	61031	61771	.	-	0	ID=cds-WP_001829706.1;Parent=gene-CP553_RS03465;Dbxref=GenBank:WP_001829706.1;Name=WP_001829706.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein lysine deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494149.1;locus_tag=CP553_RS03465;product=NAD-dependent protein deacylase;protein_id=WP_001829706.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	62071	62826	.	+	.	ID=gene-CP553_RS03470;Name=CP553_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03470;old_locus_tag=CP553_03575
NZ_PCFD01000006.1	Protein Homology	CDS	62071	62826	.	+	0	ID=cds-WP_001829761.1;Parent=gene-CP553_RS03470;Dbxref=GenBank:WP_001829761.1;Name=WP_001829761.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020359644.1;locus_tag=CP553_RS03470;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001829761.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	63197	63625	.	+	.	ID=gene-CP553_RS03475;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=CP553_RS03475;old_locus_tag=CP553_03580
NZ_PCFD01000006.1	Protein Homology	CDS	63197	63625	.	+	0	ID=cds-WP_001829760.1;Parent=gene-CP553_RS03475;Dbxref=GenBank:WP_001829760.1;Name=WP_001829760.1;Ontology_term=GO:0019512,GO:0050044;gbkey=CDS;gene=lacA;go_function=galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500922.1;locus_tag=CP553_RS03475;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_001829760.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	63640	64155	.	+	.	ID=gene-CP553_RS03480;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=CP553_RS03480;old_locus_tag=CP553_03585
NZ_PCFD01000006.1	Protein Homology	CDS	63640	64155	.	+	0	ID=cds-WP_001829777.1;Parent=gene-CP553_RS03480;Dbxref=GenBank:WP_001829777.1;Name=WP_001829777.1;Ontology_term=GO:0019512,GO:0016861,GO:0050044;gbkey=CDS;gene=lacB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA,galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500921.1;locus_tag=CP553_RS03480;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_001829777.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	64168	65100	.	+	.	ID=gene-CP553_RS03485;Name=CP553_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03485;old_locus_tag=CP553_03590
NZ_PCFD01000006.1	Protein Homology	CDS	64168	65100	.	+	0	ID=cds-WP_001829786.1;Parent=gene-CP553_RS03485;Dbxref=GenBank:WP_001829786.1;Name=WP_001829786.1;Ontology_term=GO:0019512,GO:0009024;gbkey=CDS;go_function=tagatose-6-phosphate kinase activity|0009024||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829786.1;locus_tag=CP553_RS03485;product=tagatose-6-phosphate kinase;protein_id=WP_001829786.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	65104	66081	.	+	.	ID=gene-CP553_RS03490;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=CP553_RS03490;old_locus_tag=CP553_03595
NZ_PCFD01000006.1	Protein Homology	CDS	65104	66081	.	+	0	ID=cds-WP_001829784.1;Parent=gene-CP553_RS03490;Dbxref=GenBank:WP_001829784.1;Name=WP_001829784.1;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456993.1;locus_tag=CP553_RS03490;product=tagatose-bisphosphate aldolase;protein_id=WP_001829784.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	66101	66415	.	+	.	ID=gene-CP553_RS03495;Name=CP553_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03495;old_locus_tag=CP553_03600
NZ_PCFD01000006.1	Protein Homology	CDS	66101	66415	.	+	0	ID=cds-WP_001829758.1;Parent=gene-CP553_RS03495;Dbxref=GenBank:WP_001829758.1;Name=WP_001829758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174827.1;locus_tag=CP553_RS03495;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_001829758.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	66421	68169	.	+	.	ID=gene-CP553_RS03500;Name=CP553_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03500;old_locus_tag=CP553_03605
NZ_PCFD01000006.1	Protein Homology	CDS	66421	68169	.	+	0	ID=cds-WP_001829731.1;Parent=gene-CP553_RS03500;Dbxref=GenBank:WP_001829731.1;Name=WP_001829731.1;Ontology_term=GO:0009401,GO:0015155,GO:0016020,GO:0019197;gbkey=CDS;go_component=membrane|0016020||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase complex|0019197||IEA;go_function=lactose transmembrane transporter activity|0015155||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467759.1;locus_tag=CP553_RS03500;product=lactose-specific PTS transporter subunit EIIC;protein_id=WP_001829731.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	68185	69597	.	+	.	ID=gene-CP553_RS03505;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=CP553_RS03505;old_locus_tag=CP553_03610
NZ_PCFD01000006.1	Protein Homology	CDS	68185	69597	.	+	0	ID=cds-WP_001832731.1;Parent=gene-CP553_RS03505;Dbxref=GenBank:WP_001832731.1;Name=WP_001832731.1;Ontology_term=GO:0019512,GO:0033920;gbkey=CDS;gene=lacG;go_function=6-phospho-beta-galactosidase activity|0033920||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500916.1;locus_tag=CP553_RS03505;product=6-phospho-beta-galactosidase;protein_id=WP_001832731.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	69868	70734	.	+	.	ID=gene-CP553_RS03510;Name=CP553_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03510;old_locus_tag=CP553_03615
NZ_PCFD01000006.1	Protein Homology	CDS	69868	70734	.	+	0	ID=cds-WP_165798624.1;Parent=gene-CP553_RS03510;Dbxref=GenBank:WP_165798624.1;Name=WP_165798624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494152.1;locus_tag=CP553_RS03510;product=alpha/beta hydrolase;protein_id=WP_165798624.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	70811	71836	.	-	.	ID=gene-CP553_RS03515;Name=CP553_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03515;old_locus_tag=CP553_03620
NZ_PCFD01000006.1	Protein Homology	CDS	70811	71836	.	-	0	ID=cds-WP_001829769.1;Parent=gene-CP553_RS03515;Dbxref=GenBank:WP_001829769.1;Name=WP_001829769.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456994.1;locus_tag=CP553_RS03515;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_001829769.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	71969	72973	.	+	.	ID=gene-CP553_RS03520;Name=CP553_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03520;old_locus_tag=CP553_03625
NZ_PCFD01000006.1	Protein Homology	CDS	71969	72973	.	+	0	ID=cds-WP_001829756.1;Parent=gene-CP553_RS03520;Dbxref=GenBank:WP_001829756.1;Name=WP_001829756.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829756.1;locus_tag=CP553_RS03520;product=NADP-dependent oxidoreductase;protein_id=WP_001829756.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	73072	74082	.	+	.	ID=gene-CP553_RS03525;Name=CP553_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03525;old_locus_tag=CP553_03630
NZ_PCFD01000006.1	Protein Homology	CDS	73072	74082	.	+	0	ID=cds-WP_002438598.1;Parent=gene-CP553_RS03525;Dbxref=GenBank:WP_002438598.1;Name=WP_002438598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485388.1;locus_tag=CP553_RS03525;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_002438598.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	74879	75415	.	+	.	ID=gene-CP553_RS03530;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=CP553_RS03530;old_locus_tag=CP553_03635
NZ_PCFD01000006.1	Protein Homology	CDS	74879	75415	.	+	0	ID=cds-WP_001829712.1;Parent=gene-CP553_RS03530;Dbxref=GenBank:WP_001829712.1;Name=WP_001829712.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500911.1;locus_tag=CP553_RS03530;product=alkaline shock response membrane anchor protein AmaP;protein_id=WP_001829712.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	75428	75667	.	+	.	ID=gene-CP553_RS03535;Name=CP553_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03535;old_locus_tag=CP553_03640
NZ_PCFD01000006.1	Protein Homology	CDS	75428	75667	.	+	0	ID=cds-WP_001829717.1;Parent=gene-CP553_RS03535;Dbxref=GenBank:WP_001829717.1;Name=WP_001829717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500910.1;locus_tag=CP553_RS03535;product=DUF2273 domain-containing protein;protein_id=WP_001829717.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	75741	76241	.	+	.	ID=gene-CP553_RS03540;Name=CP553_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03540;old_locus_tag=CP553_03645
NZ_PCFD01000006.1	Protein Homology	CDS	75741	76241	.	+	0	ID=cds-WP_001829780.1;Parent=gene-CP553_RS03540;Dbxref=GenBank:WP_001829780.1;Name=WP_001829780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500909.1;locus_tag=CP553_RS03540;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_001829780.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	76302	78263	.	-	.	ID=gene-CP553_RS03545;Name=CP553_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03545;old_locus_tag=CP553_03650
NZ_PCFD01000006.1	Protein Homology	CDS	76302	78263	.	-	0	ID=cds-WP_001829789.1;Parent=gene-CP553_RS03545;Dbxref=GenBank:WP_001829789.1;Name=WP_001829789.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485392.1;locus_tag=CP553_RS03545;product=IucA/IucC family protein;protein_id=WP_001829789.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	78366	79547	.	+	.	ID=gene-CP553_RS03550;Name=CP553_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03550;old_locus_tag=CP553_03655
NZ_PCFD01000006.1	Protein Homology	CDS	78366	79547	.	+	0	ID=cds-WP_001829750.1;Parent=gene-CP553_RS03550;Dbxref=GenBank:WP_001829750.1;Name=WP_001829750.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020359702.1;locus_tag=CP553_RS03550;product=MFS transporter;protein_id=WP_001829750.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	79537	81294	.	+	.	ID=gene-CP553_RS03555;Name=CP553_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03555;old_locus_tag=CP553_03660
NZ_PCFD01000006.1	Protein Homology	CDS	79537	81294	.	+	0	ID=cds-WP_001829766.1;Parent=gene-CP553_RS03555;Dbxref=GenBank:WP_001829766.1;Name=WP_001829766.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458397.1;locus_tag=CP553_RS03555;product=IucA/IucC family protein;protein_id=WP_001829766.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	81298	82359	.	+	.	ID=gene-CP553_RS03560;Name=CP553_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03560;old_locus_tag=CP553_03665
NZ_PCFD01000006.1	Protein Homology	CDS	81298	82359	.	+	0	ID=cds-WP_001829764.1;Parent=gene-CP553_RS03560;Dbxref=GenBank:WP_001829764.1;Name=WP_001829764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498584.1;locus_tag=CP553_RS03560;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_001829764.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	82561	83556	.	+	.	ID=gene-CP553_RS03565;Name=CP553_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03565;old_locus_tag=CP553_03670
NZ_PCFD01000006.1	Protein Homology	CDS	82561	83556	.	+	0	ID=cds-WP_001832728.1;Parent=gene-CP553_RS03565;Dbxref=GenBank:WP_001832728.1;Name=WP_001832728.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476062.1;locus_tag=CP553_RS03565;product=ABC transporter substrate-binding protein;protein_id=WP_001832728.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	83568	84599	.	+	.	ID=gene-CP553_RS03570;Name=CP553_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03570;old_locus_tag=CP553_03675
NZ_PCFD01000006.1	Protein Homology	CDS	83568	84599	.	+	0	ID=cds-WP_001832732.1;Parent=gene-CP553_RS03570;Dbxref=GenBank:WP_001832732.1;Name=WP_001832732.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832732.1;locus_tag=CP553_RS03570;product=FecCD family ABC transporter permease;protein_id=WP_001832732.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	84596	85561	.	+	.	ID=gene-CP553_RS03575;Name=CP553_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03575;old_locus_tag=CP553_03680
NZ_PCFD01000006.1	Protein Homology	CDS	84596	85561	.	+	0	ID=cds-WP_001829779.1;Parent=gene-CP553_RS03575;Dbxref=GenBank:WP_001829779.1;Name=WP_001829779.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447360.1;locus_tag=CP553_RS03575;product=FecCD family ABC transporter permease;protein_id=WP_001829779.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	85858	87231	.	+	.	ID=gene-CP553_RS03580;Name=CP553_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03580;old_locus_tag=CP553_03685
NZ_PCFD01000006.1	Protein Homology	CDS	85858	87231	.	+	0	ID=cds-WP_001829719.1;Parent=gene-CP553_RS03580;Dbxref=GenBank:WP_001829719.1;Name=WP_001829719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503688.1;locus_tag=CP553_RS03580;product=YjiH family protein;protein_id=WP_001829719.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	87410	87724	.	-	.	ID=gene-CP553_RS03585;Name=CP553_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03585;old_locus_tag=CP553_03690
NZ_PCFD01000006.1	Protein Homology	CDS	87410	87724	.	-	0	ID=cds-WP_001829739.1;Parent=gene-CP553_RS03585;Dbxref=GenBank:WP_001829739.1;Name=WP_001829739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447362.1;locus_tag=CP553_RS03585;product=heme oxygenase;protein_id=WP_001829739.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	87877	88137	.	-	.	ID=gene-CP553_RS03590;Name=CP553_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03590;old_locus_tag=CP553_03695
NZ_PCFD01000006.1	Protein Homology	CDS	87877	88137	.	-	0	ID=cds-WP_001829752.1;Parent=gene-CP553_RS03590;Dbxref=GenBank:WP_001829752.1;Name=WP_001829752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500896.1;locus_tag=CP553_RS03590;product=SunI/YnzG family protein;protein_id=WP_001829752.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	88314	88823	.	+	.	ID=gene-CP553_RS03595;Name=CP553_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03595;old_locus_tag=CP553_03700
NZ_PCFD01000006.1	Protein Homology	CDS	88314	88823	.	+	0	ID=cds-WP_001829793.1;Parent=gene-CP553_RS03595;Dbxref=GenBank:WP_001829793.1;Name=WP_001829793.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020365533.1;locus_tag=CP553_RS03595;product=metal-dependent hydrolase;protein_id=WP_001829793.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	88878	90065	.	+	.	ID=gene-CP553_RS03600;Name=CP553_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03600;old_locus_tag=CP553_03705
NZ_PCFD01000006.1	Protein Homology	CDS	88878	90065	.	+	0	ID=cds-WP_001829743.1;Parent=gene-CP553_RS03600;Dbxref=GenBank:WP_001829743.1;Name=WP_001829743.1;Ontology_term=GO:0070569;gbkey=CDS;go_function=uridylyltransferase activity|0070569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500894.1;locus_tag=CP553_RS03600;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_001829743.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	90084	90767	.	+	.	ID=gene-CP553_RS03605;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=CP553_RS03605;old_locus_tag=CP553_03710
NZ_PCFD01000006.1	Protein Homology	CDS	90084	90767	.	+	0	ID=cds-WP_001829724.1;Parent=gene-CP553_RS03605;Dbxref=GenBank:WP_001829724.1;Name=WP_001829724.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500893.1;locus_tag=CP553_RS03605;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_001829724.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	91006	92343	.	+	.	ID=gene-CP553_RS03610;Name=sdrM;gbkey=Gene;gene=sdrM;gene_biotype=protein_coding;locus_tag=CP553_RS03610;old_locus_tag=CP553_03715
NZ_PCFD01000006.1	Protein Homology	CDS	91006	92343	.	+	0	ID=cds-WP_001829735.1;Parent=gene-CP553_RS03610;Dbxref=GenBank:WP_001829735.1;Name=WP_001829735.1;gbkey=CDS;gene=sdrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457000.1;locus_tag=CP553_RS03610;product=multidrug efflux MFS transporter SdrM;protein_id=WP_001829735.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	92534	93001	.	+	.	ID=gene-CP553_RS03615;Name=CP553_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03615;old_locus_tag=CP553_03720
NZ_PCFD01000006.1	Protein Homology	CDS	92534	93001	.	+	0	ID=cds-WP_001829729.1;Parent=gene-CP553_RS03615;Dbxref=GenBank:WP_001829729.1;Name=WP_001829729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447367.1;locus_tag=CP553_RS03615;product=SepA family multidrug efflux transporter;protein_id=WP_001829729.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	93271	94710	.	+	.	ID=gene-CP553_RS03620;Name=CP553_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03620;old_locus_tag=CP553_03725
NZ_PCFD01000006.1	Protein Homology	CDS	93271	94710	.	+	0	ID=cds-WP_001829781.1;Parent=gene-CP553_RS03620;Dbxref=GenBank:WP_001829781.1;Name=WP_001829781.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496347.1;locus_tag=CP553_RS03620;product=MDR family MFS transporter;protein_id=WP_001829781.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	94859	95926	.	+	.	ID=gene-CP553_RS03625;Name=CP553_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03625;old_locus_tag=CP553_03730
NZ_PCFD01000006.1	Protein Homology	CDS	94859	95926	.	+	0	ID=cds-WP_001829773.1;Parent=gene-CP553_RS03625;Dbxref=GenBank:WP_001829773.1;Name=WP_001829773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474092.1;locus_tag=CP553_RS03625;product=P-loop NTPase;protein_id=WP_001829773.1;transl_table=11
NZ_PCFD01000006.1	RefSeq	gene	96382	96506	.	+	.	ID=gene-CP553_RS03630;Name=CP553_RS03630;end_range=96506,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS03630;old_locus_tag=CP553_03735;partial=true
NZ_PCFD01000006.1	cmsearch	rRNA	96382	96506	.	+	.	ID=rna-CP553_RS03630;Parent=gene-CP553_RS03630;Dbxref=RFAM:RF00177;end_range=96506,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS03630;partial=true;product=16S ribosomal RNA
NZ_PCFD01000006.1	cmsearch	exon	96382	96506	.	+	.	ID=exon-CP553_RS03630-1;Parent=rna-CP553_RS03630;Dbxref=RFAM:RF00177;end_range=96506,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS03630;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PCFD01000007.1 1 87312
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000007.1	RefSeq	region	1	87312	.	+	.	ID=NZ_PCFD01000007.1:1..87312;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000007.1	RefSeq	pseudogene	139	662	.	+	.	ID=gene-CP553_RS03635;Name=CP553_RS03635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS03635;old_locus_tag=CP553_03740;partial=true;pseudo=true;start_range=.,139
NZ_PCFD01000007.1	Protein Homology	CDS	139	662	.	+	0	ID=cds-CP553_RS03635;Parent=gene-CP553_RS03635;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805333.1;locus_tag=CP553_RS03635;partial=true;product=DNA/RNA non-specific endonuclease;pseudo=true;start_range=.,139;transl_table=11
NZ_PCFD01000007.1	RefSeq	pseudogene	691	1036	.	-	.	ID=gene-CP553_RS12750;Name=CP553_RS12750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12750;old_locus_tag=CP553_03745;partial=true;pseudo=true;start_range=.,691
NZ_PCFD01000007.1	Protein Homology	CDS	691	1036	.	-	0	ID=cds-CP553_RS12750;Parent=gene-CP553_RS12750;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474535.1;locus_tag=CP553_RS12750;partial=true;product=recombinase family protein;pseudo=true;start_range=.,691;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	1548	1679	.	-	.	ID=gene-CP553_RS12875;Name=CP553_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12875
NZ_PCFD01000007.1	Protein Homology	CDS	1548	1679	.	-	0	ID=cds-WP_001832932.1;Parent=gene-CP553_RS12875;Dbxref=GenBank:WP_001832932.1;Name=WP_001832932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832932.1;locus_tag=CP553_RS12875;product=hypothetical protein;protein_id=WP_001832932.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	1913	2008	.	-	.	ID=gene-CP553_RS03645;Name=CP553_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03645
NZ_PCFD01000007.1	Protein Homology	CDS	1913	2008	.	-	0	ID=cds-WP_002494655.1;Parent=gene-CP553_RS03645;Dbxref=GenBank:WP_002494655.1;Name=WP_002494655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889978.1;locus_tag=CP553_RS03645;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_002494655.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	2958	4295	.	+	.	ID=gene-CP553_RS03650;Name=CP553_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03650;old_locus_tag=CP553_03760
NZ_PCFD01000007.1	Protein Homology	CDS	2958	4295	.	+	0	ID=cds-WP_002456334.1;Parent=gene-CP553_RS03650;Dbxref=GenBank:WP_002456334.1;Name=WP_002456334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467828.1;locus_tag=CP553_RS03650;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_002456334.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	4701	4802	.	+	.	ID=gene-CP553_RS03655;Name=CP553_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03655;old_locus_tag=CP553_03765
NZ_PCFD01000007.1	Protein Homology	CDS	4701	4802	.	+	0	ID=cds-WP_002437978.1;Parent=gene-CP553_RS03655;Dbxref=GenBank:WP_002437978.1;Name=WP_002437978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898541.1;locus_tag=CP553_RS03655;product=SE2200 family small protein;protein_id=WP_002437978.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	pseudogene	5000	7332	.	+	.	ID=gene-CP553_RS03660;Name=CP553_RS03660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS03660;old_locus_tag=CP553_03775;pseudo=true
NZ_PCFD01000007.1	Protein Homology	CDS	5000	7332	.	+	0	ID=cds-CP553_RS03660;Parent=gene-CP553_RS03660;Note=frameshifted;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363888.1;locus_tag=CP553_RS03660;product=CDP-glycerol glycerophosphotransferase family protein;pseudo=true;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	7523	9067	.	+	.	ID=gene-CP553_RS03665;Name=CP553_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03665;old_locus_tag=CP553_03780
NZ_PCFD01000007.1	Protein Homology	CDS	7523	9067	.	+	0	ID=cds-WP_001830616.1;Parent=gene-CP553_RS03665;Dbxref=GenBank:WP_001830616.1;Name=WP_001830616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020367635.1;locus_tag=CP553_RS03665;product=NAD(P)H-binding protein;protein_id=WP_001830616.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	9190	10659	.	-	.	ID=gene-CP553_RS03670;Name=CP553_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03670;old_locus_tag=CP553_03785
NZ_PCFD01000007.1	Protein Homology	CDS	9190	10659	.	-	0	ID=cds-WP_002437984.1;Parent=gene-CP553_RS03670;Dbxref=GenBank:WP_002437984.1;Name=WP_002437984.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830638.1;locus_tag=CP553_RS03670;product=alkaline phosphatase;protein_id=WP_002437984.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	10957	11136	.	+	.	ID=gene-CP553_RS03675;Name=CP553_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03675;old_locus_tag=CP553_03790
NZ_PCFD01000007.1	Protein Homology	CDS	10957	11136	.	+	0	ID=cds-WP_001830653.1;Parent=gene-CP553_RS03675;Dbxref=GenBank:WP_001830653.1;Name=WP_001830653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830653.1;locus_tag=CP553_RS03675;product=hypothetical protein;protein_id=WP_001830653.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	11167	11832	.	+	.	ID=gene-CP553_RS03680;Name=CP553_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03680;old_locus_tag=CP553_03795
NZ_PCFD01000007.1	Protein Homology	CDS	11167	11832	.	+	0	ID=cds-WP_001830679.1;Parent=gene-CP553_RS03680;Dbxref=GenBank:WP_001830679.1;Name=WP_001830679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501407.1;locus_tag=CP553_RS03680;product=response regulator transcription factor;protein_id=WP_001830679.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	11838	12734	.	+	.	ID=gene-CP553_RS03685;Name=CP553_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03685;old_locus_tag=CP553_03800
NZ_PCFD01000007.1	Protein Homology	CDS	11838	12734	.	+	0	ID=cds-WP_002437988.1;Parent=gene-CP553_RS03685;Dbxref=GenBank:WP_002437988.1;Name=WP_002437988.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494881.1;locus_tag=CP553_RS03685;product=sensor histidine kinase;protein_id=WP_002437988.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	12845	13594	.	+	.	ID=gene-CP553_RS03690;Name=CP553_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03690;old_locus_tag=CP553_03805
NZ_PCFD01000007.1	Protein Homology	CDS	12845	13594	.	+	0	ID=cds-WP_001830627.1;Parent=gene-CP553_RS03690;Dbxref=GenBank:WP_001830627.1;Name=WP_001830627.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495981.1;locus_tag=CP553_RS03690;product=ABC transporter ATP-binding protein;protein_id=WP_001830627.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	13596	15608	.	+	.	ID=gene-CP553_RS03695;Name=CP553_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03695;old_locus_tag=CP553_03810
NZ_PCFD01000007.1	Protein Homology	CDS	13596	15608	.	+	0	ID=cds-WP_002456335.1;Parent=gene-CP553_RS03695;Dbxref=GenBank:WP_002456335.1;Name=WP_002456335.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012087922.1;locus_tag=CP553_RS03695;product=ABC transporter permease;protein_id=WP_002456335.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	15712	16302	.	+	.	ID=gene-CP553_RS03700;Name=CP553_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03700;old_locus_tag=CP553_03815
NZ_PCFD01000007.1	Protein Homology	CDS	15712	16302	.	+	0	ID=cds-WP_001830621.1;Parent=gene-CP553_RS03700;Dbxref=GenBank:WP_001830621.1;Name=WP_001830621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511273.1;locus_tag=CP553_RS03700;product=DUF4064 domain-containing protein;protein_id=WP_001830621.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	16824	18416	.	+	.	ID=gene-CP553_RS03705;Name=CP553_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03705;old_locus_tag=CP553_03820
NZ_PCFD01000007.1	Protein Homology	CDS	16824	18416	.	+	0	ID=cds-WP_001830676.1;Parent=gene-CP553_RS03705;Dbxref=GenBank:WP_001830676.1;Name=WP_001830676.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830676.1;locus_tag=CP553_RS03705;product=solute:sodium symporter family transporter;protein_id=WP_001830676.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	18546	19730	.	+	.	ID=gene-CP553_RS03710;Name=CP553_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03710;old_locus_tag=CP553_03825
NZ_PCFD01000007.1	Protein Homology	CDS	18546	19730	.	+	0	ID=cds-WP_001830600.1;Parent=gene-CP553_RS03710;Dbxref=GenBank:WP_001830600.1;Name=WP_001830600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830600.1;locus_tag=CP553_RS03710;product=hypothetical protein;protein_id=WP_001830600.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	19727	20836	.	+	.	ID=gene-CP553_RS03715;Name=CP553_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03715;old_locus_tag=CP553_03830
NZ_PCFD01000007.1	Protein Homology	CDS	19727	20836	.	+	0	ID=cds-WP_002437996.1;Parent=gene-CP553_RS03715;Dbxref=GenBank:WP_002437996.1;Name=WP_002437996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363894.1;locus_tag=CP553_RS03715;product=hypothetical protein;protein_id=WP_002437996.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	20981	22306	.	+	.	ID=gene-CP553_RS03720;Name=CP553_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03720;old_locus_tag=CP553_03835
NZ_PCFD01000007.1	Protein Homology	CDS	20981	22306	.	+	0	ID=cds-WP_002456336.1;Parent=gene-CP553_RS03720;Dbxref=GenBank:WP_002456336.1;Name=WP_002456336.1;Ontology_term=GO:0008233,GO:0070007;gbkey=CDS;go_function=peptidase activity|0008233||IEA,glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464767.1;locus_tag=CP553_RS03720;product=PrsW family glutamic-type intramembrane protease;protein_id=WP_002456336.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	22312	23061	.	+	.	ID=gene-CP553_RS03725;Name=CP553_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03725;old_locus_tag=CP553_03840
NZ_PCFD01000007.1	Protein Homology	CDS	22312	23061	.	+	0	ID=cds-WP_002456337.1;Parent=gene-CP553_RS03725;Dbxref=GenBank:WP_002456337.1;Name=WP_002456337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368384.1;locus_tag=CP553_RS03725;product=zinc-ribbon domain-containing protein;protein_id=WP_002456337.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	23281	23721	.	+	.	ID=gene-CP553_RS03730;Name=CP553_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03730;old_locus_tag=CP553_03845
NZ_PCFD01000007.1	Protein Homology	CDS	23281	23721	.	+	0	ID=cds-WP_002438002.1;Parent=gene-CP553_RS03730;Dbxref=GenBank:WP_002438002.1;Name=WP_002438002.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490895.1;locus_tag=CP553_RS03730;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_002438002.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	23738	25081	.	+	.	ID=gene-CP553_RS03735;Name=CP553_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03735;old_locus_tag=CP553_03850
NZ_PCFD01000007.1	Protein Homology	CDS	23738	25081	.	+	0	ID=cds-WP_002438003.1;Parent=gene-CP553_RS03735;Dbxref=GenBank:WP_002438003.1;Name=WP_002438003.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012085178.1;locus_tag=CP553_RS03735;product=dihydrolipoyl dehydrogenase family protein;protein_id=WP_002438003.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	25094	25570	.	+	.	ID=gene-CP553_RS03740;Name=CP553_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03740;old_locus_tag=CP553_03855
NZ_PCFD01000007.1	Protein Homology	CDS	25094	25570	.	+	0	ID=cds-WP_002438004.1;Parent=gene-CP553_RS03740;Dbxref=GenBank:WP_002438004.1;Name=WP_002438004.1;Ontology_term=GO:0006979,GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456708.1;locus_tag=CP553_RS03740;product=glutathione peroxidase;protein_id=WP_002438004.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	25883	26614	.	+	.	ID=gene-CP553_RS03745;Name=CP553_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03745;old_locus_tag=CP553_03865
NZ_PCFD01000007.1	Protein Homology	CDS	25883	26614	.	+	0	ID=cds-WP_002438006.1;Parent=gene-CP553_RS03745;Dbxref=GenBank:WP_002438006.1;Name=WP_002438006.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830661.1;locus_tag=CP553_RS03745;product=phosphoadenylyl-sulfate reductase;protein_id=WP_002438006.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	26912	28756	.	+	.	ID=gene-CP553_RS03750;Name=CP553_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03750;old_locus_tag=CP553_03870
NZ_PCFD01000007.1	Protein Homology	CDS	26912	28756	.	+	0	ID=cds-WP_002456338.1;Parent=gene-CP553_RS03750;Dbxref=GenBank:WP_002456338.1;Name=WP_002456338.1;Ontology_term=GO:0006790,GO:0019344,GO:0004783,GO:0010181,GO:0050660,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfur compound metabolic process|0006790||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490455.1;locus_tag=CP553_RS03750;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WP_002456338.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	28776	30494	.	+	.	ID=gene-CP553_RS03755;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=CP553_RS03755;old_locus_tag=CP553_03875
NZ_PCFD01000007.1	Protein Homology	CDS	28776	30494	.	+	0	ID=cds-WP_002438008.1;Parent=gene-CP553_RS03755;Dbxref=GenBank:WP_002438008.1;Name=WP_002438008.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493241.1;locus_tag=CP553_RS03755;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_002438008.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	30516	31295	.	+	.	ID=gene-CP553_RS03760;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=CP553_RS03760;old_locus_tag=CP553_03880
NZ_PCFD01000007.1	Protein Homology	CDS	30516	31295	.	+	0	ID=cds-WP_002438009.1;Parent=gene-CP553_RS03760;Dbxref=GenBank:WP_002438009.1;Name=WP_002438009.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959304.1;locus_tag=CP553_RS03760;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_002438009.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	31370	31981	.	+	.	ID=gene-CP553_RS03765;Name=CP553_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03765;old_locus_tag=CP553_03885
NZ_PCFD01000007.1	Protein Homology	CDS	31370	31981	.	+	0	ID=cds-WP_002438010.1;Parent=gene-CP553_RS03765;Dbxref=GenBank:WP_002438010.1;Name=WP_002438010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447029.1;locus_tag=CP553_RS03765;product=NAD(P)-binding protein;protein_id=WP_002438010.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	32002	32901	.	+	.	ID=gene-CP553_RS03770;Name=CP553_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03770;old_locus_tag=CP553_03890
NZ_PCFD01000007.1	Protein Homology	CDS	32002	32901	.	+	0	ID=cds-WP_002438011.1;Parent=gene-CP553_RS03770;Dbxref=GenBank:WP_002438011.1;Name=WP_002438011.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497767.1;locus_tag=CP553_RS03770;product=sulfite exporter TauE/SafE family protein;protein_id=WP_002438011.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	32925	34103	.	+	.	ID=gene-CP553_RS03775;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=CP553_RS03775;old_locus_tag=CP553_03895
NZ_PCFD01000007.1	Protein Homology	CDS	32925	34103	.	+	0	ID=cds-WP_002438012.1;Parent=gene-CP553_RS03775;Dbxref=GenBank:WP_002438012.1;Name=WP_002438012.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=sat;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438012.1;locus_tag=CP553_RS03775;product=sulfate adenylyltransferase;protein_id=WP_002438012.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	34119	34718	.	+	.	ID=gene-CP553_RS03780;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=CP553_RS03780;old_locus_tag=CP553_03900
NZ_PCFD01000007.1	Protein Homology	CDS	34119	34718	.	+	0	ID=cds-WP_002438013.1;Parent=gene-CP553_RS03780;Dbxref=GenBank:WP_002438013.1;Name=WP_002438013.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438013.1;locus_tag=CP553_RS03780;product=adenylyl-sulfate kinase;protein_id=WP_002438013.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	35042	35347	.	+	.	ID=gene-CP553_RS03785;Name=CP553_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03785;old_locus_tag=CP553_03905
NZ_PCFD01000007.1	Protein Homology	CDS	35042	35347	.	+	0	ID=cds-WP_002438015.1;Parent=gene-CP553_RS03785;Dbxref=GenBank:WP_002438015.1;Name=WP_002438015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438015.1;locus_tag=CP553_RS03785;product=hypothetical protein;protein_id=WP_002438015.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	35666	37516	.	+	.	ID=gene-CP553_RS03790;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=CP553_RS03790;old_locus_tag=CP553_03910
NZ_PCFD01000007.1	Protein Homology	CDS	35666	37516	.	+	0	ID=cds-WP_002438017.1;Parent=gene-CP553_RS03790;Dbxref=GenBank:WP_002438017.1;Name=WP_002438017.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361474.1;locus_tag=CP553_RS03790;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_002438017.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	37513	38049	.	+	.	ID=gene-CP553_RS03795;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=CP553_RS03795;old_locus_tag=CP553_03915
NZ_PCFD01000007.1	Protein Homology	CDS	37513	38049	.	+	0	ID=cds-WP_002438021.1;Parent=gene-CP553_RS03795;Dbxref=GenBank:WP_002438021.1;Name=WP_002438021.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447033.1;locus_tag=CP553_RS03795;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_002438021.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	38413	39711	.	+	.	ID=gene-CP553_RS03800;Name=CP553_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03800;old_locus_tag=CP553_03920
NZ_PCFD01000007.1	Protein Homology	CDS	38413	39711	.	+	0	ID=cds-WP_001830664.1;Parent=gene-CP553_RS03800;Dbxref=GenBank:WP_001830664.1;Name=WP_001830664.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830664.1;locus_tag=CP553_RS03800;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_001830664.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	40132	41754	.	+	.	ID=gene-CP553_RS03805;Name=CP553_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03805;old_locus_tag=CP553_03930
NZ_PCFD01000007.1	Protein Homology	CDS	40132	41754	.	+	0	ID=cds-WP_001830660.1;Parent=gene-CP553_RS03805;Dbxref=GenBank:WP_001830660.1;Name=WP_001830660.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501390.2;locus_tag=CP553_RS03805;product=BCCT family transporter;protein_id=WP_001830660.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	41801	42364	.	-	.	ID=gene-CP553_RS03810;Name=cudC;gbkey=Gene;gene=cudC;gene_biotype=protein_coding;gene_synonym=betI;locus_tag=CP553_RS03810;old_locus_tag=CP553_03935
NZ_PCFD01000007.1	Protein Homology	CDS	41801	42364	.	-	0	ID=cds-WP_001830608.1;Parent=gene-CP553_RS03810;Dbxref=GenBank:WP_001830608.1;Name=WP_001830608.1;gbkey=CDS;gene=cudC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830608.1;locus_tag=CP553_RS03810;product=choline uptake/conversion transcriptional regulator CudC;protein_id=WP_001830608.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	42836	44326	.	+	.	ID=gene-CP553_RS03815;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=CP553_RS03815;old_locus_tag=CP553_03940
NZ_PCFD01000007.1	Protein Homology	CDS	42836	44326	.	+	0	ID=cds-WP_001830602.1;Parent=gene-CP553_RS03815;Dbxref=GenBank:WP_001830602.1;Name=WP_001830602.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501386.1;locus_tag=CP553_RS03815;product=betaine-aldehyde dehydrogenase;protein_id=WP_001830602.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	44486	46204	.	+	.	ID=gene-CP553_RS03820;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=CP553_RS03820;old_locus_tag=CP553_03945
NZ_PCFD01000007.1	Protein Homology	CDS	44486	46204	.	+	0	ID=cds-WP_001830593.1;Parent=gene-CP553_RS03820;Dbxref=GenBank:WP_001830593.1;Name=WP_001830593.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465189.1;locus_tag=CP553_RS03820;product=choline dehydrogenase;protein_id=WP_001830593.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	46526	47701	.	+	.	ID=gene-CP553_RS03825;Name=CP553_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03825;old_locus_tag=CP553_03950
NZ_PCFD01000007.1	Protein Homology	CDS	46526	47701	.	+	0	ID=cds-WP_001830632.1;Parent=gene-CP553_RS03825;Dbxref=GenBank:WP_001830632.1;Name=WP_001830632.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470277.1;locus_tag=CP553_RS03825;product=amidohydrolase;protein_id=WP_001830632.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	48148	48366	.	+	.	ID=gene-CP553_RS03830;Name=CP553_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03830;old_locus_tag=CP553_03955
NZ_PCFD01000007.1	Protein Homology	CDS	48148	48366	.	+	0	ID=cds-WP_001830634.1;Parent=gene-CP553_RS03830;Dbxref=GenBank:WP_001830634.1;Name=WP_001830634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830634.1;locus_tag=CP553_RS03830;product=sterile alpha motif-like domain-containing protein;protein_id=WP_001830634.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	48394	48840	.	+	.	ID=gene-CP553_RS03835;Name=CP553_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03835;old_locus_tag=CP553_03960
NZ_PCFD01000007.1	Protein Homology	CDS	48394	48840	.	+	0	ID=cds-WP_001830617.1;Parent=gene-CP553_RS03835;Dbxref=GenBank:WP_001830617.1;Name=WP_001830617.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490853.1;locus_tag=CP553_RS03835;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_001830617.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	49177	50772	.	+	.	ID=gene-CP553_RS03840;Name=mbcS;gbkey=Gene;gene=mbcS;gene_biotype=protein_coding;locus_tag=CP553_RS03840;old_locus_tag=CP553_03965
NZ_PCFD01000007.1	Protein Homology	CDS	49177	50772	.	+	0	ID=cds-WP_001830656.1;Parent=gene-CP553_RS03840;Dbxref=GenBank:WP_001830656.1;Name=WP_001830656.1;gbkey=CDS;gene=mbcS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505544.1;locus_tag=CP553_RS03840;product=acyl-CoA synthetase MbcS;protein_id=WP_001830656.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	51120	53747	.	+	.	ID=gene-CP553_RS03845;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=CP553_RS03845;old_locus_tag=CP553_03970
NZ_PCFD01000007.1	Protein Homology	CDS	51120	53747	.	+	0	ID=cds-WP_002438032.1;Parent=gene-CP553_RS03845;Dbxref=GenBank:WP_002438032.1;Name=WP_002438032.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468754.1;locus_tag=CP553_RS03845;product=pyruvate%2C phosphate dikinase;protein_id=WP_002438032.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	53749	54567	.	+	.	ID=gene-CP553_RS03850;Name=CP553_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03850;old_locus_tag=CP553_03975
NZ_PCFD01000007.1	Protein Homology	CDS	53749	54567	.	+	0	ID=cds-WP_001830630.1;Parent=gene-CP553_RS03850;Dbxref=GenBank:WP_001830630.1;Name=WP_001830630.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447042.1;locus_tag=CP553_RS03850;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_001830630.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	54776	56275	.	+	.	ID=gene-CP553_RS03855;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=CP553_RS03855;old_locus_tag=CP553_03980
NZ_PCFD01000007.1	Protein Homology	CDS	54776	56275	.	+	0	ID=cds-WP_001830651.1;Parent=gene-CP553_RS03855;Dbxref=GenBank:WP_001830651.1;Name=WP_001830651.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113823.1;locus_tag=CP553_RS03855;product=L-lactate dehydrogenase (quinone);protein_id=WP_001830651.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	56670	57593	.	+	.	ID=gene-CP553_RS03860;Name=CP553_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03860;old_locus_tag=CP553_03985
NZ_PCFD01000007.1	Protein Homology	CDS	56670	57593	.	+	0	ID=cds-WP_001830655.1;Parent=gene-CP553_RS03860;Dbxref=GenBank:WP_001830655.1;Name=WP_001830655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012093258.1;locus_tag=CP553_RS03860;product=hypothetical protein;protein_id=WP_001830655.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	57726	58616	.	-	.	ID=gene-CP553_RS03865;Name=CP553_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03865;old_locus_tag=CP553_03990
NZ_PCFD01000007.1	Protein Homology	CDS	57726	58616	.	-	0	ID=cds-WP_001830665.1;Parent=gene-CP553_RS03865;Dbxref=GenBank:WP_001830665.1;Name=WP_001830665.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478556.1;locus_tag=CP553_RS03865;product=fructose bisphosphate aldolase;protein_id=WP_001830665.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	58921	60282	.	-	.	ID=gene-CP553_RS03870;Name=CP553_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03870;old_locus_tag=CP553_03995
NZ_PCFD01000007.1	Protein Homology	CDS	58921	60282	.	-	0	ID=cds-WP_002438035.1;Parent=gene-CP553_RS03870;Dbxref=GenBank:WP_002438035.1;Name=WP_002438035.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495974.1;locus_tag=CP553_RS03870;product=FAD-dependent oxidoreductase;protein_id=WP_002438035.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	pseudogene	60892	61071	.	+	.	ID=gene-CP553_RS03875;Name=CP553_RS03875;end_range=61071,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS03875;old_locus_tag=CP553_04000;partial=true;pseudo=true
NZ_PCFD01000007.1	Protein Homology	CDS	60892	61071	.	+	0	ID=cds-CP553_RS03875;Parent=gene-CP553_RS03875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=61071,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494449.1;locus_tag=CP553_RS03875;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	61075	61665	.	-	.	ID=gene-CP553_RS03880;Name=CP553_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03880;old_locus_tag=CP553_04005
NZ_PCFD01000007.1	Protein Homology	CDS	61075	61665	.	-	0	ID=cds-WP_001830659.1;Parent=gene-CP553_RS03880;Dbxref=GenBank:WP_001830659.1;Name=WP_001830659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456341.1;locus_tag=CP553_RS03880;product=hypothetical protein;protein_id=WP_001830659.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	61988	62866	.	+	.	ID=gene-CP553_RS03885;Name=CP553_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03885;old_locus_tag=CP553_04010
NZ_PCFD01000007.1	Protein Homology	CDS	61988	62866	.	+	0	ID=cds-WP_001830614.1;Parent=gene-CP553_RS03885;Dbxref=GenBank:WP_001830614.1;Name=WP_001830614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360614.1;locus_tag=CP553_RS03885;product=hypothetical protein;protein_id=WP_001830614.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	62970	63401	.	-	.	ID=gene-CP553_RS03890;Name=CP553_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03890;old_locus_tag=CP553_04015
NZ_PCFD01000007.1	Protein Homology	CDS	62970	63401	.	-	0	ID=cds-WP_001830680.1;Parent=gene-CP553_RS03890;Dbxref=GenBank:WP_001830680.1;Name=WP_001830680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504286.1;locus_tag=CP553_RS03890;product=hypothetical protein;protein_id=WP_001830680.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	63667	65004	.	+	.	ID=gene-CP553_RS03895;Name=CP553_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03895;old_locus_tag=CP553_04025
NZ_PCFD01000007.1	Protein Homology	CDS	63667	65004	.	+	0	ID=cds-WP_001830675.1;Parent=gene-CP553_RS03895;Dbxref=GenBank:WP_001830675.1;Name=WP_001830675.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501377.1;locus_tag=CP553_RS03895;product=aspartate aminotransferase family protein;protein_id=WP_001830675.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	65132	66583	.	-	.	ID=gene-CP553_RS03900;Name=CP553_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03900;old_locus_tag=CP553_04030
NZ_PCFD01000007.1	Protein Homology	CDS	65132	66583	.	-	0	ID=cds-WP_001830629.1;Parent=gene-CP553_RS03900;Dbxref=GenBank:WP_001830629.1;Name=WP_001830629.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830629.1;locus_tag=CP553_RS03900;product=APC family permease;protein_id=WP_001830629.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	67127	68008	.	+	.	ID=gene-CP553_RS03905;Name=cidR;gbkey=Gene;gene=cidR;gene_biotype=protein_coding;locus_tag=CP553_RS03905;old_locus_tag=CP553_04035
NZ_PCFD01000007.1	Protein Homology	CDS	67127	68008	.	+	0	ID=cds-WP_001830605.1;Parent=gene-CP553_RS03905;Dbxref=GenBank:WP_001830605.1;Name=WP_001830605.1;gbkey=CDS;gene=cidR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447052.1;locus_tag=CP553_RS03905;product=cidABC operon transcriptional activator CidR;protein_id=WP_001830605.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	68842	69792	.	+	.	ID=gene-CP553_RS03910;Name=CP553_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03910;old_locus_tag=CP553_04040
NZ_PCFD01000007.1	Protein Homology	CDS	68842	69792	.	+	0	ID=cds-WP_001830650.1;Parent=gene-CP553_RS03910;Dbxref=GenBank:WP_001830650.1;Name=WP_001830650.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503222.1;locus_tag=CP553_RS03910;product=L-lactate dehydrogenase;protein_id=WP_001830650.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	69855	71519	.	+	.	ID=gene-CP553_RS03915;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=CP553_RS03915;old_locus_tag=CP553_04045
NZ_PCFD01000007.1	Protein Homology	CDS	69855	71519	.	+	0	ID=cds-WP_001830666.1;Parent=gene-CP553_RS03915;Dbxref=GenBank:WP_001830666.1;Name=WP_001830666.1;Ontology_term=GO:0034077,GO:0000287,GO:0003984,GO:0030976;gbkey=CDS;gene=alsS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=butanediol metabolic process|0034077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500936.1;locus_tag=CP553_RS03915;product=acetolactate synthase AlsS;protein_id=WP_001830666.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	71631	72335	.	+	.	ID=gene-CP553_RS03920;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=CP553_RS03920;old_locus_tag=CP553_04050
NZ_PCFD01000007.1	Protein Homology	CDS	71631	72335	.	+	0	ID=cds-WP_001830626.1;Parent=gene-CP553_RS03920;Dbxref=GenBank:WP_001830626.1;Name=WP_001830626.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500935.1;locus_tag=CP553_RS03920;product=acetolactate decarboxylase;protein_id=WP_001830626.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	72734	73603	.	-	.	ID=gene-CP553_RS03925;Name=CP553_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03925;old_locus_tag=CP553_04055
NZ_PCFD01000007.1	Protein Homology	CDS	72734	73603	.	-	0	ID=cds-WP_002456342.1;Parent=gene-CP553_RS03925;Dbxref=GenBank:WP_002456342.1;Name=WP_002456342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458256.1;locus_tag=CP553_RS03925;product=oxidoreductase;protein_id=WP_002456342.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	73679	74497	.	+	.	ID=gene-CP553_RS03930;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=CP553_RS03930;old_locus_tag=CP553_04060
NZ_PCFD01000007.1	Protein Homology	CDS	73679	74497	.	+	0	ID=cds-WP_001830671.1;Parent=gene-CP553_RS03930;Dbxref=GenBank:WP_001830671.1;Name=WP_001830671.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454078.1;locus_tag=CP553_RS03930;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_001830671.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	74490	75350	.	+	.	ID=gene-CP553_RS03935;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=CP553_RS03935;old_locus_tag=CP553_04065
NZ_PCFD01000007.1	Protein Homology	CDS	74490	75350	.	+	0	ID=cds-WP_002438057.1;Parent=gene-CP553_RS03935;Dbxref=GenBank:WP_002438057.1;Name=WP_002438057.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465203.1;locus_tag=CP553_RS03935;product=pantoate--beta-alanine ligase;protein_id=WP_002438057.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	75343	75729	.	+	.	ID=gene-CP553_RS03940;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=CP553_RS03940;old_locus_tag=CP553_04070
NZ_PCFD01000007.1	Protein Homology	CDS	75343	75729	.	+	0	ID=cds-WP_001830619.1;Parent=gene-CP553_RS03940;Dbxref=GenBank:WP_001830619.1;Name=WP_001830619.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475660.1;locus_tag=CP553_RS03940;product=aspartate 1-decarboxylase;protein_id=WP_001830619.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	76153	77163	.	+	.	ID=gene-CP553_RS03945;Name=CP553_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03945;old_locus_tag=CP553_04075
NZ_PCFD01000007.1	Protein Homology	CDS	76153	77163	.	+	0	ID=cds-WP_001830633.1;Parent=gene-CP553_RS03945;Dbxref=GenBank:WP_001830633.1;Name=WP_001830633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486857.1;locus_tag=CP553_RS03945;product=zinc-ribbon domain-containing protein;protein_id=WP_001830633.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	77167	78498	.	+	.	ID=gene-CP553_RS03950;Name=CP553_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03950;old_locus_tag=CP553_04080
NZ_PCFD01000007.1	Protein Homology	CDS	77167	78498	.	+	0	ID=cds-WP_001830674.1;Parent=gene-CP553_RS03950;Dbxref=GenBank:WP_001830674.1;Name=WP_001830674.1;Ontology_term=GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505058.1;locus_tag=CP553_RS03950;product=zinc ribbon domain-containing protein;protein_id=WP_001830674.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	78805	79491	.	+	.	ID=gene-CP553_RS03955;Name=CP553_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03955;old_locus_tag=CP553_04085
NZ_PCFD01000007.1	Protein Homology	CDS	78805	79491	.	+	0	ID=cds-WP_153647446.1;Parent=gene-CP553_RS03955;Dbxref=GenBank:WP_153647446.1;Name=WP_153647446.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175101.1;locus_tag=CP553_RS03955;product=epoxyqueuosine reductase QueH;protein_id=WP_153647446.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	79774	79929	.	+	.	ID=gene-CP553_RS03960;Name=CP553_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03960
NZ_PCFD01000007.1	GeneMarkS-2+	CDS	79774	79929	.	+	0	ID=cds-WP_001830677.1;Parent=gene-CP553_RS03960;Dbxref=GenBank:WP_001830677.1;Name=WP_001830677.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS03960;product=hypothetical protein;protein_id=WP_001830677.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	80060	80329	.	-	.	ID=gene-CP553_RS03965;Name=CP553_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03965;old_locus_tag=CP553_04090
NZ_PCFD01000007.1	Protein Homology	CDS	80060	80329	.	-	0	ID=cds-WP_001830640.1;Parent=gene-CP553_RS03965;Dbxref=GenBank:WP_001830640.1;Name=WP_001830640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493826.1;locus_tag=CP553_RS03965;product=hypothetical protein;protein_id=WP_001830640.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	80423	81487	.	-	.	ID=gene-CP553_RS03970;Name=CP553_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03970;old_locus_tag=CP553_04095
NZ_PCFD01000007.1	Protein Homology	CDS	80423	81487	.	-	0	ID=cds-WP_001830663.1;Parent=gene-CP553_RS03970;Dbxref=GenBank:WP_001830663.1;Name=WP_001830663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501362.1;locus_tag=CP553_RS03970;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_001830663.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	81711	82568	.	+	.	ID=gene-CP553_RS03975;Name=CP553_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03975;old_locus_tag=CP553_04100
NZ_PCFD01000007.1	Protein Homology	CDS	81711	82568	.	+	0	ID=cds-WP_001830635.1;Parent=gene-CP553_RS03975;Dbxref=GenBank:WP_001830635.1;Name=WP_001830635.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467976.1;locus_tag=CP553_RS03975;product=fructosamine kinase family protein;protein_id=WP_001830635.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	82775	84154	.	+	.	ID=gene-CP553_RS03980;Name=CP553_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03980;old_locus_tag=CP553_04105
NZ_PCFD01000007.1	Protein Homology	CDS	82775	84154	.	+	0	ID=cds-WP_002438069.1;Parent=gene-CP553_RS03980;Dbxref=GenBank:WP_002438069.1;Name=WP_002438069.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438069.1;locus_tag=CP553_RS03980;product=amino acid permease;protein_id=WP_002438069.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	84456	85514	.	+	.	ID=gene-CP553_RS03985;Name=CP553_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03985;old_locus_tag=CP553_04110
NZ_PCFD01000007.1	Protein Homology	CDS	84456	85514	.	+	0	ID=cds-WP_001830678.1;Parent=gene-CP553_RS03985;Dbxref=GenBank:WP_001830678.1;Name=WP_001830678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501341.1;locus_tag=CP553_RS03985;product=PTS transporter subunit IIC;protein_id=WP_001830678.1;transl_table=11
NZ_PCFD01000007.1	RefSeq	gene	85615	87039	.	+	.	ID=gene-CP553_RS03990;Name=CP553_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS03990;old_locus_tag=CP553_04115
NZ_PCFD01000007.1	Protein Homology	CDS	85615	87039	.	+	0	ID=cds-WP_001830598.1;Parent=gene-CP553_RS03990;Dbxref=GenBank:WP_001830598.1;Name=WP_001830598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366330.1;locus_tag=CP553_RS03990;product=polyphosphate--AMP phosphotransferase;protein_id=WP_001830598.1;transl_table=11
##sequence-region NZ_PCFD01000008.1 1 83087
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000008.1	RefSeq	region	1	83087	.	+	.	ID=NZ_PCFD01000008.1:1..83087;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000008.1	RefSeq	gene	11	125	.	+	.	ID=gene-CP553_RS03995;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CP553_RS03995;old_locus_tag=CP553_04125
NZ_PCFD01000008.1	cmsearch	rRNA	11	125	.	+	.	ID=rna-CP553_RS03995;Parent=gene-CP553_RS03995;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS03995;product=5S ribosomal RNA
NZ_PCFD01000008.1	cmsearch	exon	11	125	.	+	.	ID=exon-CP553_RS03995-1;Parent=rna-CP553_RS03995;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS03995;product=5S ribosomal RNA
NZ_PCFD01000008.1	RefSeq	gene	139	213	.	+	.	ID=gene-CP553_RS04000;Name=CP553_RS04000;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS04000;old_locus_tag=CP553_04130
NZ_PCFD01000008.1	tRNAscan-SE	tRNA	139	213	.	+	.	ID=rna-CP553_RS04000;Parent=gene-CP553_RS04000;anticodon=(pos:171..173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04000;product=tRNA-Asn
NZ_PCFD01000008.1	tRNAscan-SE	exon	139	213	.	+	.	ID=exon-CP553_RS04000-1;Parent=rna-CP553_RS04000;anticodon=(pos:171..173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04000;product=tRNA-Asn
NZ_PCFD01000008.1	RefSeq	gene	215	286	.	+	.	ID=gene-CP553_RS04005;Name=CP553_RS04005;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS04005;old_locus_tag=CP553_04135
NZ_PCFD01000008.1	tRNAscan-SE	tRNA	215	286	.	+	.	ID=rna-CP553_RS04005;Parent=gene-CP553_RS04005;anticodon=(pos:248..250);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04005;product=tRNA-Glu
NZ_PCFD01000008.1	tRNAscan-SE	exon	215	286	.	+	.	ID=exon-CP553_RS04005-1;Parent=rna-CP553_RS04005;anticodon=(pos:248..250);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04005;product=tRNA-Glu
NZ_PCFD01000008.1	RefSeq	gene	293	368	.	+	.	ID=gene-CP553_RS04010;Name=CP553_RS04010;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS04010;old_locus_tag=CP553_04140
NZ_PCFD01000008.1	tRNAscan-SE	tRNA	293	368	.	+	.	ID=rna-CP553_RS04010;Parent=gene-CP553_RS04010;anticodon=(pos:326..328);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04010;product=tRNA-Val
NZ_PCFD01000008.1	tRNAscan-SE	exon	293	368	.	+	.	ID=exon-CP553_RS04010-1;Parent=rna-CP553_RS04010;anticodon=(pos:326..328);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04010;product=tRNA-Val
NZ_PCFD01000008.1	RefSeq	gene	385	468	.	+	.	ID=gene-CP553_RS04015;Name=CP553_RS04015;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS04015;old_locus_tag=CP553_04145
NZ_PCFD01000008.1	tRNAscan-SE	tRNA	385	468	.	+	.	ID=rna-CP553_RS04015;Parent=gene-CP553_RS04015;anticodon=(pos:419..421);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04015;product=tRNA-Tyr
NZ_PCFD01000008.1	tRNAscan-SE	exon	385	468	.	+	.	ID=exon-CP553_RS04015-1;Parent=rna-CP553_RS04015;anticodon=(pos:419..421);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04015;product=tRNA-Tyr
NZ_PCFD01000008.1	RefSeq	gene	473	547	.	+	.	ID=gene-CP553_RS04020;Name=CP553_RS04020;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS04020;old_locus_tag=CP553_04150
NZ_PCFD01000008.1	tRNAscan-SE	tRNA	473	547	.	+	.	ID=rna-CP553_RS04020;Parent=gene-CP553_RS04020;anticodon=(pos:505..507);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04020;product=tRNA-Gln
NZ_PCFD01000008.1	tRNAscan-SE	exon	473	547	.	+	.	ID=exon-CP553_RS04020-1;Parent=rna-CP553_RS04020;anticodon=(pos:505..507);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04020;product=tRNA-Gln
NZ_PCFD01000008.1	RefSeq	gene	551	623	.	+	.	ID=gene-CP553_RS04025;Name=CP553_RS04025;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS04025;old_locus_tag=CP553_04155
NZ_PCFD01000008.1	tRNAscan-SE	tRNA	551	623	.	+	.	ID=rna-CP553_RS04025;Parent=gene-CP553_RS04025;anticodon=(pos:584..586);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04025;product=tRNA-Lys
NZ_PCFD01000008.1	tRNAscan-SE	exon	551	623	.	+	.	ID=exon-CP553_RS04025-1;Parent=rna-CP553_RS04025;anticodon=(pos:584..586);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04025;product=tRNA-Lys
NZ_PCFD01000008.1	RefSeq	gene	790	1599	.	+	.	ID=gene-CP553_RS04030;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=CP553_RS04030;old_locus_tag=CP553_04160
NZ_PCFD01000008.1	Protein Homology	CDS	790	1599	.	+	0	ID=cds-WP_001829928.1;Parent=gene-CP553_RS04030;Dbxref=GenBank:WP_001829928.1;Name=WP_001829928.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475624.1;locus_tag=CP553_RS04030;product=diadenylate cyclase CdaA;protein_id=WP_001829928.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	1600	2535	.	+	.	ID=gene-CP553_RS04035;Name=CP553_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04035;old_locus_tag=CP553_04165
NZ_PCFD01000008.1	Protein Homology	CDS	1600	2535	.	+	0	ID=cds-WP_001829925.1;Parent=gene-CP553_RS04035;Dbxref=GenBank:WP_001829925.1;Name=WP_001829925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447826.1;locus_tag=CP553_RS04035;product=CdaR family protein;protein_id=WP_001829925.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	2560	3915	.	+	.	ID=gene-CP553_RS04040;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=CP553_RS04040;old_locus_tag=CP553_04170
NZ_PCFD01000008.1	Protein Homology	CDS	2560	3915	.	+	0	ID=cds-WP_001829911.1;Parent=gene-CP553_RS04040;Dbxref=GenBank:WP_001829911.1;Name=WP_001829911.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500881.1;locus_tag=CP553_RS04040;product=phosphoglucosamine mutase;protein_id=WP_001829911.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	4546	6351	.	+	.	ID=gene-CP553_RS04045;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=CP553_RS04045;old_locus_tag=CP553_04175
NZ_PCFD01000008.1	Protein Homology	CDS	4546	6351	.	+	0	ID=cds-WP_001829889.1;Parent=gene-CP553_RS04045;Dbxref=GenBank:WP_001829889.1;Name=WP_001829889.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500875.1;locus_tag=CP553_RS04045;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_001829889.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	6846	7703	.	+	.	ID=gene-CP553_RS04050;Name=CP553_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04050;old_locus_tag=CP553_04180
NZ_PCFD01000008.1	Protein Homology	CDS	6846	7703	.	+	0	ID=cds-WP_001829896.1;Parent=gene-CP553_RS04050;Dbxref=GenBank:WP_001829896.1;Name=WP_001829896.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829896.1;locus_tag=CP553_RS04050;product=HAD family hydrolase;protein_id=WP_001829896.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	8008	9159	.	-	.	ID=gene-CP553_RS04055;Name=CP553_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04055;old_locus_tag=CP553_04185
NZ_PCFD01000008.1	Protein Homology	CDS	8008	9159	.	-	0	ID=cds-WP_001829926.1;Parent=gene-CP553_RS04055;Dbxref=GenBank:WP_001829926.1;Name=WP_001829926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494238.1;locus_tag=CP553_RS04055;product=lytic transglycosylase;protein_id=WP_001829926.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	9292	10023	.	+	.	ID=gene-CP553_RS04060;Name=CP553_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04060;old_locus_tag=CP553_04190
NZ_PCFD01000008.1	Protein Homology	CDS	9292	10023	.	+	0	ID=cds-WP_001829921.1;Parent=gene-CP553_RS04060;Dbxref=GenBank:WP_001829921.1;Name=WP_001829921.1;Ontology_term=GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502702.1;locus_tag=CP553_RS04060;product=metallophosphoesterase family protein;protein_id=WP_001829921.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	10284	11237	.	-	.	ID=gene-CP553_RS04065;Name=czrB;gbkey=Gene;gene=czrB;gene_biotype=protein_coding;locus_tag=CP553_RS04065;old_locus_tag=CP553_04195
NZ_PCFD01000008.1	Protein Homology	CDS	10284	11237	.	-	0	ID=cds-WP_001829912.1;Parent=gene-CP553_RS04065;Dbxref=GenBank:WP_001829912.1;Name=WP_001829912.1;gbkey=CDS;gene=czrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464718.1;locus_tag=CP553_RS04065;product=CDF family zinc efflux transporter CzrB;protein_id=WP_001829912.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	11224	11565	.	-	.	ID=gene-CP553_RS04070;Name=czrA;gbkey=Gene;gene=czrA;gene_biotype=protein_coding;locus_tag=CP553_RS04070;old_locus_tag=CP553_04200
NZ_PCFD01000008.1	Protein Homology	CDS	11224	11565	.	-	0	ID=cds-WP_001829898.1;Parent=gene-CP553_RS04070;Dbxref=GenBank:WP_001829898.1;Name=WP_001829898.1;gbkey=CDS;gene=czrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499956.1;locus_tag=CP553_RS04070;product=Zn(II)-responsive metalloregulatory transcriptional repressor CzrA;protein_id=WP_001829898.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	11710	12366	.	+	.	ID=gene-CP553_RS04075;Name=CP553_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04075;old_locus_tag=CP553_04205
NZ_PCFD01000008.1	Protein Homology	CDS	11710	12366	.	+	0	ID=cds-WP_001829986.1;Parent=gene-CP553_RS04075;Dbxref=GenBank:WP_001829986.1;Name=WP_001829986.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503664.1;locus_tag=CP553_RS04075;product=NAD(P)-binding oxidoreductase;protein_id=WP_001829986.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	13008	13946	.	+	.	ID=gene-CP553_RS04080;Name=CP553_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04080;old_locus_tag=CP553_04215
NZ_PCFD01000008.1	Protein Homology	CDS	13008	13946	.	+	0	ID=cds-WP_001829908.1;Parent=gene-CP553_RS04080;Dbxref=GenBank:WP_001829908.1;Name=WP_001829908.1;Ontology_term=GO:0004476,GO:0008270;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489598.1;locus_tag=CP553_RS04080;product=type I phosphomannose isomerase catalytic subunit;protein_id=WP_001829908.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	14001	14228	.	+	.	ID=gene-CP553_RS04085;Name=CP553_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04085;old_locus_tag=CP553_04220
NZ_PCFD01000008.1	Protein Homology	CDS	14001	14228	.	+	0	ID=cds-WP_001829956.1;Parent=gene-CP553_RS04085;Dbxref=GenBank:WP_001829956.1;Name=WP_001829956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829956.1;locus_tag=CP553_RS04085;product=hypothetical protein;protein_id=WP_001829956.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	14461	15837	.	+	.	ID=gene-CP553_RS04090;Name=CP553_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04090;old_locus_tag=CP553_04230
NZ_PCFD01000008.1	Protein Homology	CDS	14461	15837	.	+	0	ID=cds-WP_001829918.1;Parent=gene-CP553_RS04090;Dbxref=GenBank:WP_001829918.1;Name=WP_001829918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500860.1;locus_tag=CP553_RS04090;product=EVE domain-containing protein;protein_id=WP_001829918.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	16018	16428	.	+	.	ID=gene-CP553_RS04095;Name=CP553_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04095;old_locus_tag=CP553_04235
NZ_PCFD01000008.1	Protein Homology	CDS	16018	16428	.	+	0	ID=cds-WP_001829885.1;Parent=gene-CP553_RS04095;Dbxref=GenBank:WP_001829885.1;Name=WP_001829885.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834660.1;locus_tag=CP553_RS04095;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_001829885.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	16616	17062	.	+	.	ID=gene-CP553_RS04100;Name=CP553_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04100;old_locus_tag=CP553_04240
NZ_PCFD01000008.1	Protein Homology	CDS	16616	17062	.	+	0	ID=cds-WP_001829900.1;Parent=gene-CP553_RS04100;Dbxref=GenBank:WP_001829900.1;Name=WP_001829900.1;Ontology_term=GO:0008199,GO:0016722;gbkey=CDS;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829900.1;locus_tag=CP553_RS04100;product=Dps family protein;protein_id=WP_001829900.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	17186	17896	.	-	.	ID=gene-CP553_RS04105;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=CP553_RS04105;old_locus_tag=CP553_04245
NZ_PCFD01000008.1	Protein Homology	CDS	17186	17896	.	-	0	ID=cds-WP_002440540.1;Parent=gene-CP553_RS04105;Dbxref=GenBank:WP_002440540.1;Name=WP_002440540.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=CP553_RS04105;product=purine-nucleoside phosphorylase;protein_id=WP_002440540.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	18103	18765	.	+	.	ID=gene-CP553_RS04110;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=CP553_RS04110;old_locus_tag=CP553_04250
NZ_PCFD01000008.1	Protein Homology	CDS	18103	18765	.	+	0	ID=cds-WP_002495579.1;Parent=gene-CP553_RS04110;Dbxref=GenBank:WP_002495579.1;Name=WP_002495579.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500856.1;locus_tag=CP553_RS04110;product=deoxyribose-phosphate aldolase;protein_id=WP_002495579.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	18798	20099	.	+	.	ID=gene-CP553_RS04115;Name=CP553_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04115;old_locus_tag=CP553_04255
NZ_PCFD01000008.1	Protein Homology	CDS	18798	20099	.	+	0	ID=cds-WP_002440546.1;Parent=gene-CP553_RS04115;Dbxref=GenBank:WP_002440546.1;Name=WP_002440546.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500854.1;locus_tag=CP553_RS04115;product=pyrimidine-nucleoside phosphorylase;protein_id=WP_002440546.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	20112	21302	.	+	.	ID=gene-CP553_RS04120;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=CP553_RS04120;old_locus_tag=CP553_04260
NZ_PCFD01000008.1	Protein Homology	CDS	20112	21302	.	+	0	ID=cds-WP_002495578.1;Parent=gene-CP553_RS04120;Dbxref=GenBank:WP_002495578.1;Name=WP_002495578.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834658.1;locus_tag=CP553_RS04120;product=phosphopentomutase;protein_id=WP_002495578.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	21299	21649	.	+	.	ID=gene-CP553_RS04125;Name=CP553_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04125;old_locus_tag=CP553_04265
NZ_PCFD01000008.1	Protein Homology	CDS	21299	21649	.	+	0	ID=cds-WP_001829969.1;Parent=gene-CP553_RS04125;Dbxref=GenBank:WP_001829969.1;Name=WP_001829969.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498854.1;locus_tag=CP553_RS04125;product=DoxX family protein;protein_id=WP_001829969.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	21800	22270	.	-	.	ID=gene-CP553_RS04130;Name=CP553_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04130;old_locus_tag=CP553_04270
NZ_PCFD01000008.1	Protein Homology	CDS	21800	22270	.	-	0	ID=cds-WP_001829929.1;Parent=gene-CP553_RS04130;Dbxref=GenBank:WP_001829929.1;Name=WP_001829929.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500852.1;locus_tag=CP553_RS04130;product=S-ribosylhomocysteine lyase;protein_id=WP_001829929.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	22498	23682	.	+	.	ID=gene-CP553_RS04135;Name=CP553_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04135;old_locus_tag=CP553_04275
NZ_PCFD01000008.1	Protein Homology	CDS	22498	23682	.	+	0	ID=cds-WP_002440552.1;Parent=gene-CP553_RS04135;Dbxref=GenBank:WP_002440552.1;Name=WP_002440552.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500851.1;locus_tag=CP553_RS04135;product=M20 family metallopeptidase;protein_id=WP_002440552.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	23682	24872	.	+	.	ID=gene-CP553_RS04140;Name=ldmS;gbkey=Gene;gene=ldmS;gene_biotype=protein_coding;locus_tag=CP553_RS04140;old_locus_tag=CP553_04280
NZ_PCFD01000008.1	Protein Homology	CDS	23682	24872	.	+	0	ID=cds-WP_002440553.1;Parent=gene-CP553_RS04140;Dbxref=GenBank:WP_002440553.1;Name=WP_002440553.1;Ontology_term=GO:0006555,GO:1901605,GO:0016881,GO:0034026;gbkey=CDS;gene=ldmS;go_function=acid-amino acid ligase activity|0016881||IEA,L-amino-acid alpha-ligase activity|0034026||IEA;go_process=methionine metabolic process|0006555||IEA,alpha-amino acid metabolic process|1901605||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464715.1;locus_tag=CP553_RS04140;product=L-aspartate--L-methionine ligase LdmS;protein_id=WP_002440553.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	25046	25711	.	+	.	ID=gene-CP553_RS04145;Name=CP553_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04145;old_locus_tag=CP553_04285
NZ_PCFD01000008.1	Protein Homology	CDS	25046	25711	.	+	0	ID=cds-WP_001829955.1;Parent=gene-CP553_RS04145;Dbxref=GenBank:WP_001829955.1;Name=WP_001829955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447806.1;locus_tag=CP553_RS04145;product=DUF2750 domain-containing protein;protein_id=WP_001829955.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	25933	26730	.	-	.	ID=gene-CP553_RS04150;Name=coaW;gbkey=Gene;gene=coaW;gene_biotype=protein_coding;locus_tag=CP553_RS04150;old_locus_tag=CP553_04290
NZ_PCFD01000008.1	Protein Homology	CDS	25933	26730	.	-	0	ID=cds-WP_002440556.1;Parent=gene-CP553_RS04150;Dbxref=GenBank:WP_002440556.1;Name=WP_002440556.1;Ontology_term=GO:0015937,GO:0004594,GO:0005524;gbkey=CDS;gene=coaW;go_function=pantothenate kinase activity|0004594||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368283.1;locus_tag=CP553_RS04150;product=type II pantothenate kinase;protein_id=WP_002440556.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	27033	27893	.	+	.	ID=gene-CP553_RS04155;Name=CP553_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04155;old_locus_tag=CP553_04295
NZ_PCFD01000008.1	Protein Homology	CDS	27033	27893	.	+	0	ID=cds-WP_001829899.1;Parent=gene-CP553_RS04155;Dbxref=GenBank:WP_001829899.1;Name=WP_001829899.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113817.1;locus_tag=CP553_RS04155;product=GNAT family N-acetyltransferase;protein_id=WP_001829899.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	28004	28540	.	+	.	ID=gene-CP553_RS04160;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=CP553_RS04160;old_locus_tag=CP553_04300
NZ_PCFD01000008.1	Protein Homology	CDS	28004	28540	.	+	0	ID=cds-WP_001829934.1;Parent=gene-CP553_RS04160;Dbxref=GenBank:WP_001829934.1;Name=WP_001829934.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500845.1;locus_tag=CP553_RS04160;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_001829934.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	28877	30484	.	+	.	ID=gene-CP553_RS04165;Name=CP553_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04165;old_locus_tag=CP553_04305
NZ_PCFD01000008.1	Protein Homology	CDS	28877	30484	.	+	0	ID=cds-WP_001829895.1;Parent=gene-CP553_RS04165;Dbxref=GenBank:WP_001829895.1;Name=WP_001829895.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275219.1;locus_tag=CP553_RS04165;product=CTP synthase;protein_id=WP_001829895.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	30711	31232	.	-	.	ID=gene-CP553_RS04170;Name=CP553_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04170;old_locus_tag=CP553_04310
NZ_PCFD01000008.1	Protein Homology	CDS	30711	31232	.	-	0	ID=cds-WP_002440561.1;Parent=gene-CP553_RS04170;Dbxref=GenBank:WP_002440561.1;Name=WP_002440561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470169.1;locus_tag=CP553_RS04170;product=DUF2529 domain-containing protein;protein_id=WP_002440561.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	31451	32311	.	+	.	ID=gene-CP553_RS04175;Name=fdaB;gbkey=Gene;gene=fdaB;gene_biotype=protein_coding;locus_tag=CP553_RS04175;old_locus_tag=CP553_04315
NZ_PCFD01000008.1	Protein Homology	CDS	31451	32311	.	+	0	ID=cds-WP_001829938.1;Parent=gene-CP553_RS04175;Dbxref=GenBank:WP_001829938.1;Name=WP_001829938.1;gbkey=CDS;gene=fdaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468309.1;locus_tag=CP553_RS04175;product=class IIb fructose-bisphosphate aldolase FdaB;protein_id=WP_001829938.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	32672	33931	.	+	.	ID=gene-CP553_RS04180;Name=CP553_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04180;old_locus_tag=CP553_04320
NZ_PCFD01000008.1	Protein Homology	CDS	32672	33931	.	+	0	ID=cds-WP_001829922.1;Parent=gene-CP553_RS04180;Dbxref=GenBank:WP_001829922.1;Name=WP_001829922.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500841.1;locus_tag=CP553_RS04180;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_001829922.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	34359	35786	.	+	.	ID=gene-CP553_RS04185;Name=CP553_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04185;old_locus_tag=CP553_04325
NZ_PCFD01000008.1	Protein Homology	CDS	34359	35786	.	+	0	ID=cds-WP_001832742.1;Parent=gene-CP553_RS04185;Dbxref=GenBank:WP_001832742.1;Name=WP_001832742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500839.1;locus_tag=CP553_RS04185;product=aldehyde dehydrogenase family protein;protein_id=WP_001832742.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	36090	37406	.	+	.	ID=gene-CP553_RS04190;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=CP553_RS04190;old_locus_tag=CP553_04330
NZ_PCFD01000008.1	Protein Homology	CDS	36090	37406	.	+	0	ID=cds-WP_001829985.1;Parent=gene-CP553_RS04190;Dbxref=GenBank:WP_001829985.1;Name=WP_001829985.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500838.1;locus_tag=CP553_RS04190;product=transcription termination factor Rho;protein_id=WP_001829985.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	37523	37780	.	+	.	ID=gene-CP553_RS04195;Name=CP553_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04195;old_locus_tag=CP553_04335
NZ_PCFD01000008.1	Protein Homology	CDS	37523	37780	.	+	0	ID=cds-WP_001829959.1;Parent=gene-CP553_RS04195;Dbxref=GenBank:WP_001829959.1;Name=WP_001829959.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448672.1;locus_tag=CP553_RS04195;product=type B 50S ribosomal protein L31;protein_id=WP_001829959.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	38067	38666	.	+	.	ID=gene-CP553_RS04200;Name=CP553_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04200;old_locus_tag=CP553_04340
NZ_PCFD01000008.1	Protein Homology	CDS	38067	38666	.	+	0	ID=cds-WP_001829979.1;Parent=gene-CP553_RS04200;Dbxref=GenBank:WP_001829979.1;Name=WP_001829979.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500836.1;locus_tag=CP553_RS04200;product=thymidine kinase;protein_id=WP_001829979.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	38666	39742	.	+	.	ID=gene-CP553_RS04205;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=CP553_RS04205;old_locus_tag=CP553_04345
NZ_PCFD01000008.1	Protein Homology	CDS	38666	39742	.	+	0	ID=cds-WP_001829940.1;Parent=gene-CP553_RS04205;Dbxref=GenBank:WP_001829940.1;Name=WP_001829940.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=CP553_RS04205;product=peptide chain release factor 1;protein_id=WP_001829940.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	39729	40565	.	+	.	ID=gene-CP553_RS04210;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=CP553_RS04210;old_locus_tag=CP553_04350
NZ_PCFD01000008.1	Protein Homology	CDS	39729	40565	.	+	0	ID=cds-WP_002440566.1;Parent=gene-CP553_RS04210;Dbxref=GenBank:WP_002440566.1;Name=WP_002440566.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368359.1;locus_tag=CP553_RS04210;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_002440566.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	40728	41771	.	+	.	ID=gene-CP553_RS04215;Name=CP553_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04215;old_locus_tag=CP553_04360
NZ_PCFD01000008.1	Protein Homology	CDS	40728	41771	.	+	0	ID=cds-WP_001829923.1;Parent=gene-CP553_RS04215;Dbxref=GenBank:WP_001829923.1;Name=WP_001829923.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447794.1;locus_tag=CP553_RS04215;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_001829923.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	41768	42187	.	+	.	ID=gene-CP553_RS04220;Name=CP553_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04220;old_locus_tag=CP553_04365
NZ_PCFD01000008.1	Protein Homology	CDS	41768	42187	.	+	0	ID=cds-WP_001829939.1;Parent=gene-CP553_RS04220;Dbxref=GenBank:WP_001829939.1;Name=WP_001829939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491177.1;locus_tag=CP553_RS04220;product=low molecular weight protein arginine phosphatase;protein_id=WP_001829939.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	42297	42821	.	+	.	ID=gene-CP553_RS04225;Name=CP553_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04225;old_locus_tag=CP553_04370
NZ_PCFD01000008.1	Protein Homology	CDS	42297	42821	.	+	0	ID=cds-WP_001829927.1;Parent=gene-CP553_RS04225;Dbxref=GenBank:WP_001829927.1;Name=WP_001829927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500831.1;locus_tag=CP553_RS04225;product=TIGR01440 family protein;protein_id=WP_001829927.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	42846	44084	.	+	.	ID=gene-CP553_RS04230;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CP553_RS04230;old_locus_tag=CP553_04375
NZ_PCFD01000008.1	Protein Homology	CDS	42846	44084	.	+	0	ID=cds-WP_001829892.1;Parent=gene-CP553_RS04230;Dbxref=GenBank:WP_001829892.1;Name=WP_001829892.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829892.1;locus_tag=CP553_RS04230;product=serine hydroxymethyltransferase;protein_id=WP_001829892.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	44113	44742	.	+	.	ID=gene-CP553_RS04235;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=CP553_RS04235;old_locus_tag=CP553_04380
NZ_PCFD01000008.1	Protein Homology	CDS	44113	44742	.	+	0	ID=cds-WP_001829916.1;Parent=gene-CP553_RS04235;Dbxref=GenBank:WP_001829916.1;Name=WP_001829916.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636774.1;locus_tag=CP553_RS04235;product=uracil phosphoribosyltransferase;protein_id=WP_001829916.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	44767	45912	.	+	.	ID=gene-CP553_RS04240;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=CP553_RS04240;old_locus_tag=CP553_04385
NZ_PCFD01000008.1	Protein Homology	CDS	44767	45912	.	+	0	ID=cds-WP_001829933.1;Parent=gene-CP553_RS04240;Dbxref=GenBank:WP_001829933.1;Name=WP_001829933.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498790.1;locus_tag=CP553_RS04240;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_001829933.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	46065	46415	.	+	.	ID=gene-CP553_RS04245;Name=CP553_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04245;old_locus_tag=CP553_04390
NZ_PCFD01000008.1	Protein Homology	CDS	46065	46415	.	+	0	ID=cds-WP_002494682.1;Parent=gene-CP553_RS04245;Dbxref=GenBank:WP_002494682.1;Name=WP_002494682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494682.1;locus_tag=CP553_RS04245;product=ATP synthase subunit I;protein_id=WP_002494682.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	46441	47169	.	+	.	ID=gene-CP553_RS04250;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=CP553_RS04250;old_locus_tag=CP553_04395
NZ_PCFD01000008.1	Protein Homology	CDS	46441	47169	.	+	0	ID=cds-WP_001829936.1;Parent=gene-CP553_RS04250;Dbxref=GenBank:WP_001829936.1;Name=WP_001829936.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500826.1;locus_tag=CP553_RS04250;product=F0F1 ATP synthase subunit A;protein_id=WP_001829936.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	47212	47424	.	+	.	ID=gene-CP553_RS04255;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=CP553_RS04255;old_locus_tag=CP553_04400
NZ_PCFD01000008.1	Protein Homology	CDS	47212	47424	.	+	0	ID=cds-WP_001048816.1;Parent=gene-CP553_RS04255;Dbxref=GenBank:WP_001048816.1;Name=WP_001048816.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500825.1;locus_tag=CP553_RS04255;product=F0F1 ATP synthase subunit C;protein_id=WP_001048816.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	47522	48037	.	+	.	ID=gene-CP553_RS04260;Name=CP553_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04260;old_locus_tag=CP553_04405
NZ_PCFD01000008.1	Protein Homology	CDS	47522	48037	.	+	0	ID=cds-WP_001829958.1;Parent=gene-CP553_RS04260;Dbxref=GenBank:WP_001829958.1;Name=WP_001829958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500824.1;locus_tag=CP553_RS04260;product=F0F1 ATP synthase subunit B;protein_id=WP_001829958.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	48037	48576	.	+	.	ID=gene-CP553_RS04265;Name=CP553_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04265;old_locus_tag=CP553_04410
NZ_PCFD01000008.1	Protein Homology	CDS	48037	48576	.	+	0	ID=cds-WP_001829963.1;Parent=gene-CP553_RS04265;Dbxref=GenBank:WP_001829963.1;Name=WP_001829963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495679.1;locus_tag=CP553_RS04265;product=F0F1 ATP synthase subunit delta;protein_id=WP_001829963.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	48599	50110	.	+	.	ID=gene-CP553_RS04270;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=CP553_RS04270;old_locus_tag=CP553_04415
NZ_PCFD01000008.1	Protein Homology	CDS	48599	50110	.	+	0	ID=cds-WP_001829913.1;Parent=gene-CP553_RS04270;Dbxref=GenBank:WP_001829913.1;Name=WP_001829913.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829913.1;locus_tag=CP553_RS04270;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001829913.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	50195	51061	.	+	.	ID=gene-CP553_RS04275;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=CP553_RS04275;old_locus_tag=CP553_04420
NZ_PCFD01000008.1	Protein Homology	CDS	50195	51061	.	+	0	ID=cds-WP_001829942.1;Parent=gene-CP553_RS04275;Dbxref=GenBank:WP_001829942.1;Name=WP_001829942.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500821.2;locus_tag=CP553_RS04275;product=ATP synthase F1 subunit gamma;protein_id=WP_001829942.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	51083	52495	.	+	.	ID=gene-CP553_RS04280;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=CP553_RS04280;old_locus_tag=CP553_04425
NZ_PCFD01000008.1	Protein Homology	CDS	51083	52495	.	+	0	ID=cds-WP_001829930.1;Parent=gene-CP553_RS04280;Dbxref=GenBank:WP_001829930.1;Name=WP_001829930.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636767.1;locus_tag=CP553_RS04280;product=F0F1 ATP synthase subunit beta;protein_id=WP_001829930.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	52515	52919	.	+	.	ID=gene-CP553_RS04285;Name=CP553_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04285;old_locus_tag=CP553_04430
NZ_PCFD01000008.1	Protein Homology	CDS	52515	52919	.	+	0	ID=cds-WP_001829924.1;Parent=gene-CP553_RS04285;Dbxref=GenBank:WP_001829924.1;Name=WP_001829924.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500819.1;locus_tag=CP553_RS04285;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001829924.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	53068	53301	.	+	.	ID=gene-CP553_RS04290;Name=CP553_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04290;old_locus_tag=CP553_04435
NZ_PCFD01000008.1	Protein Homology	CDS	53068	53301	.	+	0	ID=cds-WP_002456242.1;Parent=gene-CP553_RS04290;Dbxref=GenBank:WP_002456242.1;Name=WP_002456242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500817.1;locus_tag=CP553_RS04290;product=DUF1146 family protein;protein_id=WP_002456242.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	53411	54676	.	+	.	ID=gene-CP553_RS04295;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=CP553_RS04295;old_locus_tag=CP553_04440
NZ_PCFD01000008.1	Protein Homology	CDS	53411	54676	.	+	0	ID=cds-WP_002456243.1;Parent=gene-CP553_RS04295;Dbxref=GenBank:WP_002456243.1;Name=WP_002456243.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829978.1;locus_tag=CP553_RS04295;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002456243.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	54710	55147	.	+	.	ID=gene-CP553_RS04300;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=CP553_RS04300;old_locus_tag=CP553_04445
NZ_PCFD01000008.1	Protein Homology	CDS	54710	55147	.	+	0	ID=cds-WP_001829953.1;Parent=gene-CP553_RS04300;Dbxref=GenBank:WP_001829953.1;Name=WP_001829953.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829953.1;locus_tag=CP553_RS04300;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_001829953.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	55465	55905	.	-	.	ID=gene-CP553_RS04305;Name=CP553_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04305;old_locus_tag=CP553_04450
NZ_PCFD01000008.1	Protein Homology	CDS	55465	55905	.	-	0	ID=cds-WP_001829935.1;Parent=gene-CP553_RS04305;Dbxref=GenBank:WP_001829935.1;Name=WP_001829935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829935.1;locus_tag=CP553_RS04305;product=YwpF-like family protein;protein_id=WP_001829935.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	56096	56491	.	+	.	ID=gene-CP553_RS04310;Name=CP553_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04310;old_locus_tag=CP553_04455
NZ_PCFD01000008.1	Protein Homology	CDS	56096	56491	.	+	0	ID=cds-WP_001829977.1;Parent=gene-CP553_RS04310;Dbxref=GenBank:WP_001829977.1;Name=WP_001829977.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457121.1;locus_tag=CP553_RS04310;product=single-stranded DNA-binding protein;protein_id=WP_001829977.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	56879	57538	.	+	.	ID=gene-CP553_RS04315;Name=CP553_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04315;old_locus_tag=CP553_04460
NZ_PCFD01000008.1	Protein Homology	CDS	56879	57538	.	+	0	ID=cds-WP_001829904.1;Parent=gene-CP553_RS04315;Dbxref=GenBank:WP_001829904.1;Name=WP_001829904.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499548.1;locus_tag=CP553_RS04315;product=transglycosylase family protein;protein_id=WP_001829904.1;transl_table=11
NZ_PCFD01000008.1	cmsearch	riboswitch	57653	57751	.	+	.	ID=id-NZ_PCFD01000008.1:57653..57751;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000008.1	RefSeq	gene	57823	58512	.	+	.	ID=gene-CP553_RS04320;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=CP553_RS04320;old_locus_tag=CP553_04465
NZ_PCFD01000008.1	Protein Homology	CDS	57823	58512	.	+	0	ID=cds-WP_001829894.1;Parent=gene-CP553_RS04320;Dbxref=GenBank:WP_001829894.1;Name=WP_001829894.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477702.1;locus_tag=CP553_RS04320;product=thiaminase II;protein_id=WP_001829894.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	58505	59326	.	+	.	ID=gene-CP553_RS04325;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CP553_RS04325;old_locus_tag=CP553_04470
NZ_PCFD01000008.1	Protein Homology	CDS	58505	59326	.	+	0	ID=cds-WP_001832736.1;Parent=gene-CP553_RS04325;Dbxref=GenBank:WP_001832736.1;Name=WP_001832736.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832736.1;locus_tag=CP553_RS04325;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_001832736.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	59319	60107	.	+	.	ID=gene-CP553_RS04330;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=CP553_RS04330;old_locus_tag=CP553_04475
NZ_PCFD01000008.1	Protein Homology	CDS	59319	60107	.	+	0	ID=cds-WP_001829971.1;Parent=gene-CP553_RS04330;Dbxref=GenBank:WP_001829971.1;Name=WP_001829971.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501588.1;locus_tag=CP553_RS04330;product=hydroxyethylthiazole kinase;protein_id=WP_001829971.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	60113	60751	.	+	.	ID=gene-CP553_RS04335;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=CP553_RS04335;old_locus_tag=CP553_04480
NZ_PCFD01000008.1	Protein Homology	CDS	60113	60751	.	+	0	ID=cds-WP_002505076.1;Parent=gene-CP553_RS04335;Dbxref=GenBank:WP_002505076.1;Name=WP_002505076.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505076.1;locus_tag=CP553_RS04335;product=thiamine phosphate synthase;protein_id=WP_002505076.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	60840	61712	.	+	.	ID=gene-CP553_RS04340;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CP553_RS04340;old_locus_tag=CP553_04485
NZ_PCFD01000008.1	Protein Homology	CDS	60840	61712	.	+	0	ID=cds-WP_001832740.1;Parent=gene-CP553_RS04340;Dbxref=GenBank:WP_001832740.1;Name=WP_001832740.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500806.1;locus_tag=CP553_RS04340;product=membrane protein insertase YidC;protein_id=WP_001832740.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	61818	62471	.	-	.	ID=gene-CP553_RS04345;Name=CP553_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04345;old_locus_tag=CP553_04490
NZ_PCFD01000008.1	Protein Homology	CDS	61818	62471	.	-	0	ID=cds-WP_001829983.1;Parent=gene-CP553_RS04345;Dbxref=GenBank:WP_001829983.1;Name=WP_001829983.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496981.1;locus_tag=CP553_RS04345;product=HD domain-containing protein;protein_id=WP_001829983.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	62653	64137	.	-	.	ID=gene-CP553_RS04350;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=CP553_RS04350;old_locus_tag=CP553_04495
NZ_PCFD01000008.1	Protein Homology	CDS	62653	64137	.	-	0	ID=cds-WP_001829964.1;Parent=gene-CP553_RS04350;Dbxref=GenBank:WP_001829964.1;Name=WP_001829964.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468314.1;locus_tag=CP553_RS04350;product=cardiolipin synthase;protein_id=WP_001829964.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	64311	64604	.	+	.	ID=gene-CP553_RS04355;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=CP553_RS04355;old_locus_tag=CP553_04500
NZ_PCFD01000008.1	Protein Homology	CDS	64311	64604	.	+	0	ID=cds-WP_001829893.1;Parent=gene-CP553_RS04355;Dbxref=GenBank:WP_001829893.1;Name=WP_001829893.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458700.1;locus_tag=CP553_RS04355;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_001829893.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	64617	64820	.	+	.	ID=gene-CP553_RS04360;Name=csoZ;gbkey=Gene;gene=csoZ;gene_biotype=protein_coding;locus_tag=CP553_RS04360;old_locus_tag=CP553_04505
NZ_PCFD01000008.1	Protein Homology	CDS	64617	64820	.	+	0	ID=cds-WP_002494680.1;Parent=gene-CP553_RS04360;Dbxref=GenBank:WP_002494680.1;Name=WP_002494680.1;gbkey=CDS;gene=csoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474591.1;locus_tag=CP553_RS04360;product=putative copper chaperone CsoZ;protein_id=WP_002494680.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	64963	65100	.	+	.	ID=gene-CP553_RS04365;Name=CP553_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04365;old_locus_tag=CP553_04510
NZ_PCFD01000008.1	Protein Homology	CDS	64963	65100	.	+	0	ID=cds-WP_001829949.1;Parent=gene-CP553_RS04365;Dbxref=GenBank:WP_001829949.1;Name=WP_001829949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500799.1;locus_tag=CP553_RS04365;product=Lmo0850 family protein;protein_id=WP_001829949.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	65200	66411	.	-	.	ID=gene-CP553_RS04370;Name=CP553_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04370;old_locus_tag=CP553_04515
NZ_PCFD01000008.1	Protein Homology	CDS	65200	66411	.	-	0	ID=cds-WP_116842986.1;Parent=gene-CP553_RS04370;Dbxref=GenBank:WP_116842986.1;Name=WP_116842986.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447766.1;locus_tag=CP553_RS04370;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_116842986.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	66802	67875	.	+	.	ID=gene-CP553_RS04375;Name=CP553_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04375;old_locus_tag=CP553_04520
NZ_PCFD01000008.1	Protein Homology	CDS	66802	67875	.	+	0	ID=cds-WP_001832735.1;Parent=gene-CP553_RS04375;Dbxref=GenBank:WP_001832735.1;Name=WP_001832735.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474610.1;locus_tag=CP553_RS04375;product=D-alanine--D-alanine ligase;protein_id=WP_001832735.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	67887	69242	.	+	.	ID=gene-CP553_RS04380;Name=CP553_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04380;old_locus_tag=CP553_04525
NZ_PCFD01000008.1	Protein Homology	CDS	67887	69242	.	+	0	ID=cds-WP_001832734.1;Parent=gene-CP553_RS04380;Dbxref=GenBank:WP_001832734.1;Name=WP_001832734.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468334.1;locus_tag=CP553_RS04380;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_001832734.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	69541	71070	.	+	.	ID=gene-CP553_RS04385;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=CP553_RS04385;old_locus_tag=CP553_04530
NZ_PCFD01000008.1	Protein Homology	CDS	69541	71070	.	+	0	ID=cds-WP_001829967.1;Parent=gene-CP553_RS04385;Dbxref=GenBank:WP_001829967.1;Name=WP_001829967.1;gbkey=CDS;gene=cshA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500795.1;locus_tag=CP553_RS04385;product=degradosome RNA helicase CshA;protein_id=WP_001829967.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	71319	71798	.	+	.	ID=gene-CP553_RS04390;Name=CP553_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04390;old_locus_tag=CP553_04535
NZ_PCFD01000008.1	Protein Homology	CDS	71319	71798	.	+	0	ID=cds-WP_001829909.1;Parent=gene-CP553_RS04390;Dbxref=GenBank:WP_001829909.1;Name=WP_001829909.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829909.1;locus_tag=CP553_RS04390;product=PH domain-containing protein;protein_id=WP_001829909.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	71791	73296	.	+	.	ID=gene-CP553_RS04395;Name=CP553_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04395;old_locus_tag=CP553_04540
NZ_PCFD01000008.1	Protein Homology	CDS	71791	73296	.	+	0	ID=cds-WP_001829976.1;Parent=gene-CP553_RS04395;Dbxref=GenBank:WP_001829976.1;Name=WP_001829976.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486940.1;locus_tag=CP553_RS04395;product=PH domain-containing protein;protein_id=WP_001829976.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	73283	73792	.	+	.	ID=gene-CP553_RS04400;Name=CP553_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04400;old_locus_tag=CP553_04545
NZ_PCFD01000008.1	Protein Homology	CDS	73283	73792	.	+	0	ID=cds-WP_001829888.1;Parent=gene-CP553_RS04400;Dbxref=GenBank:WP_001829888.1;Name=WP_001829888.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829888.1;locus_tag=CP553_RS04400;product=PH domain-containing protein;protein_id=WP_001829888.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	73840	74193	.	+	.	ID=gene-CP553_RS04405;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=CP553_RS04405;old_locus_tag=CP553_04550
NZ_PCFD01000008.1	Protein Homology	CDS	73840	74193	.	+	0	ID=cds-WP_001829915.1;Parent=gene-CP553_RS04405;Dbxref=GenBank:WP_001829915.1;Name=WP_001829915.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498773.1;locus_tag=CP553_RS04405;product=holo-ACP synthase;protein_id=WP_001829915.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	74259	75407	.	+	.	ID=gene-CP553_RS04410;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=CP553_RS04410;old_locus_tag=CP553_04555
NZ_PCFD01000008.1	Protein Homology	CDS	74259	75407	.	+	0	ID=cds-WP_001829972.1;Parent=gene-CP553_RS04410;Dbxref=GenBank:WP_001829972.1;Name=WP_001829972.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457107.1;locus_tag=CP553_RS04410;product=alanine racemase;protein_id=WP_001829972.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	75494	75664	.	+	.	ID=gene-CP553_RS04415;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=CP553_RS04415;old_locus_tag=CP553_04560
NZ_PCFD01000008.1	Protein Homology	CDS	75494	75664	.	+	0	ID=cds-WP_001829931.1;Parent=gene-CP553_RS04415;Dbxref=GenBank:WP_001829931.1;Name=WP_001829931.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500783.1;locus_tag=CP553_RS04415;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_001829931.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	75661	76023	.	+	.	ID=gene-CP553_RS04420;Name=CP553_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04420;old_locus_tag=CP553_04565
NZ_PCFD01000008.1	Protein Homology	CDS	75661	76023	.	+	0	ID=cds-WP_001829891.1;Parent=gene-CP553_RS04420;Dbxref=GenBank:WP_001829891.1;Name=WP_001829891.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500782.1;locus_tag=CP553_RS04420;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_001829891.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	76369	77370	.	+	.	ID=gene-CP553_RS04425;Name=CP553_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04425;old_locus_tag=CP553_04570
NZ_PCFD01000008.1	Protein Homology	CDS	76369	77370	.	+	0	ID=cds-WP_001829902.1;Parent=gene-CP553_RS04425;Dbxref=GenBank:WP_001829902.1;Name=WP_001829902.1;Ontology_term=GO:0006470,GO:0004722,GO:0046872;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA,metal ion binding|0046872||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504876.1;locus_tag=CP553_RS04425;product=PP2C family protein-serine/threonine phosphatase;protein_id=WP_001829902.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	77470	77796	.	+	.	ID=gene-CP553_RS04430;Name=CP553_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04430;old_locus_tag=CP553_04575
NZ_PCFD01000008.1	Protein Homology	CDS	77470	77796	.	+	0	ID=cds-WP_001829952.1;Parent=gene-CP553_RS04430;Dbxref=GenBank:WP_001829952.1;Name=WP_001829952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468012.1;locus_tag=CP553_RS04430;product=anti-sigma factor antagonist;protein_id=WP_001829952.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	77798	78277	.	+	.	ID=gene-CP553_RS04435;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=CP553_RS04435;old_locus_tag=CP553_04580
NZ_PCFD01000008.1	Protein Homology	CDS	77798	78277	.	+	0	ID=cds-WP_001829903.1;Parent=gene-CP553_RS04435;Dbxref=GenBank:WP_001829903.1;Name=WP_001829903.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474646.1;locus_tag=CP553_RS04435;product=anti-sigma B factor RsbW;protein_id=WP_001829903.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	78252	79022	.	+	.	ID=gene-CP553_RS04440;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=CP553_RS04440;old_locus_tag=CP553_04585
NZ_PCFD01000008.1	Protein Homology	CDS	78252	79022	.	+	0	ID=cds-WP_002440602.1;Parent=gene-CP553_RS04440;Dbxref=GenBank:WP_002440602.1;Name=WP_002440602.1;Ontology_term=GO:0006352,GO:0003700,GO:0016987;gbkey=CDS;gene=sigB;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500776.1;locus_tag=CP553_RS04440;product=RNA polymerase sigma factor SigB;protein_id=WP_002440602.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	79310	81460	.	+	.	ID=gene-CP553_RS04445;Name=CP553_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04445;old_locus_tag=CP553_04590
NZ_PCFD01000008.1	Protein Homology	CDS	79310	81460	.	+	0	ID=cds-WP_001832739.1;Parent=gene-CP553_RS04445;Dbxref=GenBank:WP_001832739.1;Name=WP_001832739.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500775.1;locus_tag=CP553_RS04445;product=Tex family protein;protein_id=WP_001832739.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	81453	81908	.	+	.	ID=gene-CP553_RS04450;Name=CP553_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04450;old_locus_tag=CP553_04595
NZ_PCFD01000008.1	Protein Homology	CDS	81453	81908	.	+	0	ID=cds-WP_001829897.1;Parent=gene-CP553_RS04450;Dbxref=GenBank:WP_001829897.1;Name=WP_001829897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474634.1;locus_tag=CP553_RS04450;product=SprT family protein;protein_id=WP_001829897.1;transl_table=11
NZ_PCFD01000008.1	RefSeq	gene	82666	82752	.	+	.	ID=gene-CP553_RS04455;Name=CP553_RS04455;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS04455;old_locus_tag=CP553_04605
NZ_PCFD01000008.1	tRNAscan-SE	tRNA	82666	82752	.	+	.	ID=rna-CP553_RS04455;Parent=gene-CP553_RS04455;anticodon=(pos:82699..82701);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04455;product=tRNA-Leu
NZ_PCFD01000008.1	tRNAscan-SE	exon	82666	82752	.	+	.	ID=exon-CP553_RS04455-1;Parent=rna-CP553_RS04455;anticodon=(pos:82699..82701);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04455;product=tRNA-Leu
NZ_PCFD01000008.1	RefSeq	gene	82775	82848	.	+	.	ID=gene-CP553_RS04460;Name=CP553_RS04460;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS04460;old_locus_tag=CP553_04610
NZ_PCFD01000008.1	tRNAscan-SE	tRNA	82775	82848	.	+	.	ID=rna-CP553_RS04460;Parent=gene-CP553_RS04460;anticodon=(pos:82807..82809);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04460;product=tRNA-Gly
NZ_PCFD01000008.1	tRNAscan-SE	exon	82775	82848	.	+	.	ID=exon-CP553_RS04460-1;Parent=rna-CP553_RS04460;anticodon=(pos:82807..82809);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS04460;product=tRNA-Gly
NZ_PCFD01000008.1	RefSeq	gene	82963	83087	.	+	.	ID=gene-CP553_RS04465;Name=CP553_RS04465;end_range=83087,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS04465;old_locus_tag=CP553_04615;partial=true
NZ_PCFD01000008.1	cmsearch	rRNA	82963	83087	.	+	.	ID=rna-CP553_RS04465;Parent=gene-CP553_RS04465;Dbxref=RFAM:RF00177;end_range=83087,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS04465;partial=true;product=16S ribosomal RNA
NZ_PCFD01000008.1	cmsearch	exon	82963	83087	.	+	.	ID=exon-CP553_RS04465-1;Parent=rna-CP553_RS04465;Dbxref=RFAM:RF00177;end_range=83087,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS04465;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PCFD01000009.1 1 78508
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000009.1	RefSeq	region	1	78508	.	+	.	ID=NZ_PCFD01000009.1:1..78508;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000009.1	RefSeq	gene	299	652	.	-	.	ID=gene-CP553_RS04470;Name=CP553_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04470;old_locus_tag=CP553_04620
NZ_PCFD01000009.1	Protein Homology	CDS	299	652	.	-	0	ID=cds-WP_001830729.1;Parent=gene-CP553_RS04470;Dbxref=GenBank:WP_001830729.1;Name=WP_001830729.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498017.1;locus_tag=CP553_RS04470;product=fluoride efflux transporter FluC;protein_id=WP_001830729.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	649	1014	.	-	.	ID=gene-CP553_RS04475;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=CP553_RS04475;old_locus_tag=CP553_04625
NZ_PCFD01000009.1	Protein Homology	CDS	649	1014	.	-	0	ID=cds-WP_001830726.1;Parent=gene-CP553_RS04475;Dbxref=GenBank:WP_001830726.1;Name=WP_001830726.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500680.1;locus_tag=CP553_RS04475;product=fluoride efflux transporter CrcB;protein_id=WP_001830726.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	1053	1361	.	-	.	ID=gene-CP553_RS04480;Name=CP553_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04480;old_locus_tag=CP553_04630
NZ_PCFD01000009.1	Protein Homology	CDS	1053	1361	.	-	0	ID=cds-WP_002493962.1;Parent=gene-CP553_RS04480;Dbxref=GenBank:WP_002493962.1;Name=WP_002493962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497385.1;locus_tag=CP553_RS04480;product=hypothetical protein;protein_id=WP_002493962.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	1638	2351	.	+	.	ID=gene-CP553_RS04485;Name=CP553_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04485;old_locus_tag=CP553_04635
NZ_PCFD01000009.1	Protein Homology	CDS	1638	2351	.	+	0	ID=cds-WP_001830731.1;Parent=gene-CP553_RS04485;Dbxref=GenBank:WP_001830731.1;Name=WP_001830731.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500402.1;locus_tag=CP553_RS04485;product=transaldolase;protein_id=WP_001830731.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	2491	2934	.	+	.	ID=gene-CP553_RS04490;Name=CP553_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04490;old_locus_tag=CP553_04640
NZ_PCFD01000009.1	Protein Homology	CDS	2491	2934	.	+	0	ID=cds-WP_001830728.1;Parent=gene-CP553_RS04490;Dbxref=GenBank:WP_001830728.1;Name=WP_001830728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830728.1;locus_tag=CP553_RS04490;product=hypothetical protein;protein_id=WP_001830728.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	2921	3364	.	-	.	ID=gene-CP553_RS04495;Name=CP553_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04495;old_locus_tag=CP553_04645
NZ_PCFD01000009.1	Protein Homology	CDS	2921	3364	.	-	0	ID=cds-WP_001830734.1;Parent=gene-CP553_RS04495;Dbxref=GenBank:WP_001830734.1;Name=WP_001830734.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830734.1;locus_tag=CP553_RS04495;product=competence protein ComK;protein_id=WP_001830734.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	3370	3849	.	-	.	ID=gene-CP553_RS04500;Name=CP553_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04500;old_locus_tag=CP553_04650
NZ_PCFD01000009.1	Protein Homology	CDS	3370	3849	.	-	0	ID=cds-WP_001830724.1;Parent=gene-CP553_RS04500;Dbxref=GenBank:WP_001830724.1;Name=WP_001830724.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830724.1;locus_tag=CP553_RS04500;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_001830724.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	4057	4272	.	+	.	ID=gene-CP553_RS04505;Name=CP553_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04505;old_locus_tag=CP553_04660
NZ_PCFD01000009.1	Protein Homology	CDS	4057	4272	.	+	0	ID=cds-WP_001830737.1;Parent=gene-CP553_RS04505;Dbxref=GenBank:WP_001830737.1;Name=WP_001830737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456441.1;locus_tag=CP553_RS04505;product=hypothetical protein;protein_id=WP_001830737.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	4650	5501	.	+	.	ID=gene-CP553_RS04510;Name=CP553_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04510;old_locus_tag=CP553_04665
NZ_PCFD01000009.1	Protein Homology	CDS	4650	5501	.	+	0	ID=cds-WP_001830727.1;Parent=gene-CP553_RS04510;Dbxref=GenBank:WP_001830727.1;Name=WP_001830727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496801.1;locus_tag=CP553_RS04510;product=N-acetylglucosaminidase;protein_id=WP_001830727.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	5849	7333	.	+	.	ID=gene-CP553_RS04515;Name=CP553_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04515;old_locus_tag=CP553_04670
NZ_PCFD01000009.1	Protein Homology	CDS	5849	7333	.	+	0	ID=cds-WP_001830730.1;Parent=gene-CP553_RS04515;Dbxref=GenBank:WP_001830730.1;Name=WP_001830730.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467850.1;locus_tag=CP553_RS04515;product=FAD/NAD(P)-binding protein;protein_id=WP_001830730.1;transl_table=11
NZ_PCFD01000009.1	cmsearch	riboswitch	7482	7620	.	+	.	ID=id-NZ_PCFD01000009.1:7482..7620;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000009.1	RefSeq	gene	7770	8813	.	+	.	ID=gene-CP553_RS04520;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=CP553_RS04520;old_locus_tag=CP553_04675
NZ_PCFD01000009.1	Protein Homology	CDS	7770	8813	.	+	0	ID=cds-WP_002440254.1;Parent=gene-CP553_RS04520;Dbxref=GenBank:WP_002440254.1;Name=WP_002440254.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474980.1;locus_tag=CP553_RS04520;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_002440254.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	8820	9452	.	+	.	ID=gene-CP553_RS04525;Name=CP553_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04525;old_locus_tag=CP553_04680
NZ_PCFD01000009.1	Protein Homology	CDS	8820	9452	.	+	0	ID=cds-WP_001830723.1;Parent=gene-CP553_RS04525;Dbxref=GenBank:WP_001830723.1;Name=WP_001830723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500390.1;locus_tag=CP553_RS04525;product=riboflavin synthase;protein_id=WP_001830723.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	9465	10646	.	+	.	ID=gene-CP553_RS04530;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=CP553_RS04530;old_locus_tag=CP553_04685
NZ_PCFD01000009.1	Protein Homology	CDS	9465	10646	.	+	0	ID=cds-WP_002440250.1;Parent=gene-CP553_RS04530;Dbxref=GenBank:WP_002440250.1;Name=WP_002440250.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500389.1;locus_tag=CP553_RS04530;product=GTP cyclohydrolase II;protein_id=WP_002440250.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	10659	11120	.	+	.	ID=gene-CP553_RS04535;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=CP553_RS04535;old_locus_tag=CP553_04690
NZ_PCFD01000009.1	Protein Homology	CDS	10659	11120	.	+	0	ID=cds-WP_001830736.1;Parent=gene-CP553_RS04535;Dbxref=GenBank:WP_001830736.1;Name=WP_001830736.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474997.1;locus_tag=CP553_RS04535;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001830736.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	11168	12169	.	-	.	ID=gene-CP553_RS04540;Name=CP553_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04540;old_locus_tag=CP553_04695
NZ_PCFD01000009.1	Protein Homology	CDS	11168	12169	.	-	0	ID=cds-WP_002440246.1;Parent=gene-CP553_RS04540;Dbxref=GenBank:WP_002440246.1;Name=WP_002440246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499462.1;locus_tag=CP553_RS04540;product=proline dehydrogenase family protein;protein_id=WP_002440246.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	12413	13240	.	+	.	ID=gene-CP553_RS04545;Name=CP553_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04545;old_locus_tag=CP553_04700
NZ_PCFD01000009.1	Protein Homology	CDS	12413	13240	.	+	0	ID=cds-WP_001830886.1;Parent=gene-CP553_RS04545;Dbxref=GenBank:WP_001830886.1;Name=WP_001830886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500385.1;locus_tag=CP553_RS04545;product=alpha/beta fold hydrolase;protein_id=WP_001830886.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	13730	14074	.	+	.	ID=gene-CP553_RS04550;Name=CP553_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04550;old_locus_tag=CP553_04705
NZ_PCFD01000009.1	Protein Homology	CDS	13730	14074	.	+	0	ID=cds-WP_116842987.1;Parent=gene-CP553_RS04550;Dbxref=GenBank:WP_116842987.1;Name=WP_116842987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457854.1;locus_tag=CP553_RS04550;product=SarA family transcriptional regulator;protein_id=WP_116842987.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	14368	14931	.	-	.	ID=gene-CP553_RS04555;Name=CP553_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04555;old_locus_tag=CP553_04710
NZ_PCFD01000009.1	Protein Homology	CDS	14368	14931	.	-	0	ID=cds-WP_001830894.1;Parent=gene-CP553_RS04555;Dbxref=GenBank:WP_001830894.1;Name=WP_001830894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456448.1;locus_tag=CP553_RS04555;product=class I SAM-dependent methyltransferase;protein_id=WP_001830894.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	14928	15881	.	-	.	ID=gene-CP553_RS04560;Name=CP553_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04560;old_locus_tag=CP553_04715
NZ_PCFD01000009.1	Protein Homology	CDS	14928	15881	.	-	0	ID=cds-WP_001830802.1;Parent=gene-CP553_RS04560;Dbxref=GenBank:WP_001830802.1;Name=WP_001830802.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474958.1;locus_tag=CP553_RS04560;product=TIGR01212 family radical SAM protein;protein_id=WP_001830802.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	15988	17202	.	+	.	ID=gene-CP553_RS04565;Name=CP553_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04565;old_locus_tag=CP553_04720
NZ_PCFD01000009.1	Protein Homology	CDS	15988	17202	.	+	0	ID=cds-WP_001830884.1;Parent=gene-CP553_RS04565;Dbxref=GenBank:WP_001830884.1;Name=WP_001830884.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830884.1;locus_tag=CP553_RS04565;product=MDR family MFS transporter;protein_id=WP_001830884.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	17491	19908	.	+	.	ID=gene-CP553_RS04570;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=CP553_RS04570;old_locus_tag=CP553_04725
NZ_PCFD01000009.1	Protein Homology	CDS	17491	19908	.	+	0	ID=cds-WP_001830785.1;Parent=gene-CP553_RS04570;Dbxref=GenBank:WP_001830785.1;Name=WP_001830785.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500378.1;locus_tag=CP553_RS04570;product=leucine--tRNA ligase;protein_id=WP_001830785.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	19934	20245	.	+	.	ID=gene-CP553_RS04575;Name=CP553_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04575;old_locus_tag=CP553_04730
NZ_PCFD01000009.1	Protein Homology	CDS	19934	20245	.	+	0	ID=cds-WP_001830891.1;Parent=gene-CP553_RS04575;Dbxref=GenBank:WP_001830891.1;Name=WP_001830891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464567.1;locus_tag=CP553_RS04575;product=rhodanese-like domain-containing protein;protein_id=WP_001830891.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	20650	31728	.	+	.	ID=gene-CP553_RS04580;Name=CP553_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04580;old_locus_tag=CP553_04735
NZ_PCFD01000009.1	Protein Homology	CDS	20650	31728	.	+	0	ID=cds-WP_116842988.1;Parent=gene-CP553_RS04580;Dbxref=GenBank:WP_116842988.1;Name=WP_116842988.1;Ontology_term=GO:0098609;gbkey=CDS;go_process=cell-cell adhesion|0098609||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504033.1;locus_tag=CP553_RS04580;product=SasC/FmtB family protein;protein_id=WP_116842988.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	32100	33362	.	-	.	ID=gene-CP553_RS04585;Name=CP553_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04585;old_locus_tag=CP553_04740
NZ_PCFD01000009.1	Protein Homology	CDS	32100	33362	.	-	0	ID=cds-WP_001830813.1;Parent=gene-CP553_RS04585;Dbxref=GenBank:WP_001830813.1;Name=WP_001830813.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830813.1;locus_tag=CP553_RS04585;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001830813.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	33635	35296	.	+	.	ID=gene-CP553_RS04590;Name=CP553_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04590;old_locus_tag=CP553_04745
NZ_PCFD01000009.1	Protein Homology	CDS	33635	35296	.	+	0	ID=cds-WP_001830740.1;Parent=gene-CP553_RS04590;Dbxref=GenBank:WP_001830740.1;Name=WP_001830740.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500374.1;locus_tag=CP553_RS04590;product=putative polysaccharide biosynthesis protein;protein_id=WP_001830740.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	35293	35985	.	+	.	ID=gene-CP553_RS04595;Name=CP553_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04595;old_locus_tag=CP553_04750
NZ_PCFD01000009.1	Protein Homology	CDS	35293	35985	.	+	0	ID=cds-WP_001830817.1;Parent=gene-CP553_RS04595;Dbxref=GenBank:WP_001830817.1;Name=WP_001830817.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830817.1;locus_tag=CP553_RS04595;product=pseudouridine synthase;protein_id=WP_001830817.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	36003	36431	.	+	.	ID=gene-CP553_RS04600;Name=CP553_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04600;old_locus_tag=CP553_04755
NZ_PCFD01000009.1	Protein Homology	CDS	36003	36431	.	+	0	ID=cds-WP_001830757.1;Parent=gene-CP553_RS04600;Dbxref=GenBank:WP_001830757.1;Name=WP_001830757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830757.1;locus_tag=CP553_RS04600;product=YtxH domain-containing protein;protein_id=WP_001830757.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	36739	38148	.	+	.	ID=gene-CP553_RS04605;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=CP553_RS04605;old_locus_tag=CP553_04760
NZ_PCFD01000009.1	Protein Homology	CDS	36739	38148	.	+	0	ID=cds-WP_001830828.1;Parent=gene-CP553_RS04605;Dbxref=GenBank:WP_001830828.1;Name=WP_001830828.1;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;gene=pepV;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500371.1;locus_tag=CP553_RS04605;product=dipeptidase PepV;protein_id=WP_001830828.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	38152	39000	.	+	.	ID=gene-CP553_RS04610;Name=dat;gbkey=Gene;gene=dat;gene_biotype=protein_coding;locus_tag=CP553_RS04610;old_locus_tag=CP553_04765
NZ_PCFD01000009.1	Protein Homology	CDS	38152	39000	.	+	0	ID=cds-WP_001830829.1;Parent=gene-CP553_RS04610;Dbxref=GenBank:WP_001830829.1;Name=WP_001830829.1;Ontology_term=GO:0019480,GO:0046416,GO:0030170,GO:0047810;gbkey=CDS;gene=dat;go_function=pyridoxal phosphate binding|0030170||IEA,D-alanine-2-oxoglutarate aminotransferase activity|0047810||IEA;go_process=L-alanine oxidation to pyruvate via D-alanine|0019480||IEA,D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500370.1;locus_tag=CP553_RS04610;product=D-amino-acid transaminase;protein_id=WP_001830829.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	39387	40178	.	+	.	ID=gene-CP553_RS04615;Name=CP553_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04615;old_locus_tag=CP553_04770
NZ_PCFD01000009.1	Protein Homology	CDS	39387	40178	.	+	0	ID=cds-WP_165798625.1;Parent=gene-CP553_RS04615;Dbxref=GenBank:WP_165798625.1;Name=WP_165798625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602611.1;locus_tag=CP553_RS04615;product=phosphotransferase family protein;protein_id=WP_165798625.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	40192	40839	.	+	.	ID=gene-CP553_RS04620;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=CP553_RS04620;old_locus_tag=CP553_04775
NZ_PCFD01000009.1	Protein Homology	CDS	40192	40839	.	+	0	ID=cds-WP_002493957.1;Parent=gene-CP553_RS04620;Dbxref=GenBank:WP_002493957.1;Name=WP_002493957.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457843.1;locus_tag=CP553_RS04620;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_002493957.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	41002	41316	.	-	.	ID=gene-CP553_RS04625;Name=CP553_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04625;old_locus_tag=CP553_04780
NZ_PCFD01000009.1	Protein Homology	CDS	41002	41316	.	-	0	ID=cds-WP_001830778.1;Parent=gene-CP553_RS04625;Dbxref=GenBank:WP_001830778.1;Name=WP_001830778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457842.1;locus_tag=CP553_RS04625;product=PepSY domain-containing protein;protein_id=WP_001830778.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	41401	42486	.	+	.	ID=gene-CP553_RS04630;Name=CP553_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04630;old_locus_tag=CP553_04785
NZ_PCFD01000009.1	Protein Homology	CDS	41401	42486	.	+	0	ID=cds-WP_001830905.1;Parent=gene-CP553_RS04630;Dbxref=GenBank:WP_001830905.1;Name=WP_001830905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830905.1;locus_tag=CP553_RS04630;product=M42 family metallopeptidase;protein_id=WP_001830905.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	42492	42803	.	+	.	ID=gene-CP553_RS04635;Name=CP553_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04635;old_locus_tag=CP553_04790
NZ_PCFD01000009.1	Protein Homology	CDS	42492	42803	.	+	0	ID=cds-WP_001830792.1;Parent=gene-CP553_RS04635;Dbxref=GenBank:WP_001830792.1;Name=WP_001830792.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446698.1;locus_tag=CP553_RS04635;product=thioredoxin family protein;protein_id=WP_001830792.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	42941	43795	.	+	.	ID=gene-CP553_RS04640;Name=CP553_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04640;old_locus_tag=CP553_04795
NZ_PCFD01000009.1	Protein Homology	CDS	42941	43795	.	+	0	ID=cds-WP_001832670.1;Parent=gene-CP553_RS04640;Dbxref=GenBank:WP_001832670.1;Name=WP_001832670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012101723.1;locus_tag=CP553_RS04640;product=DUF1444 domain-containing protein;protein_id=WP_001832670.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	43818	44414	.	+	.	ID=gene-CP553_RS04645;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=CP553_RS04645;old_locus_tag=CP553_04800
NZ_PCFD01000009.1	Protein Homology	CDS	43818	44414	.	+	0	ID=cds-WP_001830779.1;Parent=gene-CP553_RS04645;Dbxref=GenBank:WP_001830779.1;Name=WP_001830779.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500362.1;locus_tag=CP553_RS04645;product=YtpR family tRNA-binding protein;protein_id=WP_001830779.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	44435	47944	.	+	.	ID=gene-CP553_RS04650;Name=CP553_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04650;old_locus_tag=CP553_04805
NZ_PCFD01000009.1	Protein Homology	CDS	44435	47944	.	+	0	ID=cds-WP_001830880.1;Parent=gene-CP553_RS04650;Dbxref=GenBank:WP_001830880.1;Name=WP_001830880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470393.1;locus_tag=CP553_RS04650;product=DNA translocase FtsK;protein_id=WP_001830880.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	47965	49278	.	+	.	ID=gene-CP553_RS04655;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=CP553_RS04655;old_locus_tag=CP553_04810
NZ_PCFD01000009.1	Protein Homology	CDS	47965	49278	.	+	0	ID=cds-WP_001830747.1;Parent=gene-CP553_RS04655;Dbxref=GenBank:WP_001830747.1;Name=WP_001830747.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500360.1;locus_tag=CP553_RS04655;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001830747.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	49353	49844	.	+	.	ID=gene-CP553_RS04660;Name=CP553_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04660;old_locus_tag=CP553_04815
NZ_PCFD01000009.1	Protein Homology	CDS	49353	49844	.	+	0	ID=cds-WP_001830868.1;Parent=gene-CP553_RS04660;Dbxref=GenBank:WP_001830868.1;Name=WP_001830868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500359.1;locus_tag=CP553_RS04660;product=DUF948 domain-containing protein;protein_id=WP_001830868.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	49922	51145	.	+	.	ID=gene-CP553_RS04665;Name=CP553_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04665;old_locus_tag=CP553_04820
NZ_PCFD01000009.1	Protein Homology	CDS	49922	51145	.	+	0	ID=cds-WP_001832675.1;Parent=gene-CP553_RS04665;Dbxref=GenBank:WP_001832675.1;Name=WP_001832675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493170.1;locus_tag=CP553_RS04665;product=YtxH domain-containing protein;protein_id=WP_001832675.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	51580	52671	.	+	.	ID=gene-CP553_RS04670;Name=CP553_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04670;old_locus_tag=CP553_04825
NZ_PCFD01000009.1	Protein Homology	CDS	51580	52671	.	+	0	ID=cds-WP_001830908.1;Parent=gene-CP553_RS04670;Dbxref=GenBank:WP_001830908.1;Name=WP_001830908.1;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500356.1;locus_tag=CP553_RS04670;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;protein_id=WP_001830908.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	52927	53916	.	+	.	ID=gene-CP553_RS04675;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=CP553_RS04675;old_locus_tag=CP553_04830
NZ_PCFD01000009.1	Protein Homology	CDS	52927	53916	.	+	0	ID=cds-WP_001830844.1;Parent=gene-CP553_RS04675;Dbxref=GenBank:WP_001830844.1;Name=WP_001830844.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500354.1;locus_tag=CP553_RS04675;product=catabolite control protein A;protein_id=WP_001830844.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	54336	56003	.	+	.	ID=gene-CP553_RS04680;Name=CP553_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04680;old_locus_tag=CP553_04835
NZ_PCFD01000009.1	Protein Homology	CDS	54336	56003	.	+	0	ID=cds-WP_002440219.1;Parent=gene-CP553_RS04680;Dbxref=GenBank:WP_002440219.1;Name=WP_002440219.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=CP553_RS04680;product=formate--tetrahydrofolate ligase;protein_id=WP_002440219.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	56093	56998	.	-	.	ID=gene-CP553_RS04685;Name=CP553_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04685;old_locus_tag=CP553_04840
NZ_PCFD01000009.1	Protein Homology	CDS	56093	56998	.	-	0	ID=cds-WP_001830902.1;Parent=gene-CP553_RS04685;Dbxref=GenBank:WP_001830902.1;Name=WP_001830902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464560.1;locus_tag=CP553_RS04685;product=transglycosylase domain-containing protein;protein_id=WP_001830902.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	57402	58667	.	+	.	ID=gene-CP553_RS04690;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=CP553_RS04690;old_locus_tag=CP553_04845
NZ_PCFD01000009.1	Protein Homology	CDS	57402	58667	.	+	0	ID=cds-WP_001830858.1;Parent=gene-CP553_RS04690;Dbxref=GenBank:WP_001830858.1;Name=WP_001830858.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464559.1;locus_tag=CP553_RS04690;product=tyrosine--tRNA ligase;protein_id=WP_001830858.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	58858	60096	.	-	.	ID=gene-CP553_RS04695;Name=CP553_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04695;old_locus_tag=CP553_04850
NZ_PCFD01000009.1	Protein Homology	CDS	58858	60096	.	-	0	ID=cds-WP_001830793.1;Parent=gene-CP553_RS04695;Dbxref=GenBank:WP_001830793.1;Name=WP_001830793.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464558.1;locus_tag=CP553_RS04695;product=S1C family serine protease;protein_id=WP_001830793.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	60376	60999	.	+	.	ID=gene-CP553_RS04700;Name=CP553_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04700;old_locus_tag=CP553_04855
NZ_PCFD01000009.1	Protein Homology	CDS	60376	60999	.	+	0	ID=cds-WP_001830872.1;Parent=gene-CP553_RS04700;Dbxref=GenBank:WP_001830872.1;Name=WP_001830872.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474689.1;locus_tag=CP553_RS04700;product=lysophospholipid acyltransferase family protein;protein_id=WP_001830872.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	61209	62681	.	+	.	ID=gene-CP553_RS04705;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=CP553_RS04705;old_locus_tag=CP553_04860
NZ_PCFD01000009.1	Protein Homology	CDS	61209	62681	.	+	0	ID=cds-WP_001830801.1;Parent=gene-CP553_RS04705;Dbxref=GenBank:WP_001830801.1;Name=WP_001830801.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489789.1;locus_tag=CP553_RS04705;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_001830801.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	62777	63901	.	+	.	ID=gene-CP553_RS04710;Name=CP553_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04710;old_locus_tag=CP553_04865
NZ_PCFD01000009.1	Protein Homology	CDS	62777	63901	.	+	0	ID=cds-WP_001830750.1;Parent=gene-CP553_RS04710;Dbxref=GenBank:WP_001830750.1;Name=WP_001830750.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360833.1;locus_tag=CP553_RS04710;product=HAD family hydrolase;protein_id=WP_001830750.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	63981	65576	.	-	.	ID=gene-CP553_RS04715;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=CP553_RS04715;old_locus_tag=CP553_04870
NZ_PCFD01000009.1	Protein Homology	CDS	63981	65576	.	-	0	ID=cds-WP_001830903.1;Parent=gene-CP553_RS04715;Dbxref=GenBank:WP_001830903.1;Name=WP_001830903.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505776.1;locus_tag=CP553_RS04715;product=phosphoglycerate dehydrogenase;protein_id=WP_001830903.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	65566	66729	.	-	.	ID=gene-CP553_RS04720;Name=CP553_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04720;old_locus_tag=CP553_04875
NZ_PCFD01000009.1	Protein Homology	CDS	65566	66729	.	-	0	ID=cds-WP_001830752.1;Parent=gene-CP553_RS04720;Dbxref=GenBank:WP_001830752.1;Name=WP_001830752.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502331.1;locus_tag=CP553_RS04720;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_001830752.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	66856	67296	.	-	.	ID=gene-CP553_RS04725;Name=CP553_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04725;old_locus_tag=CP553_04880
NZ_PCFD01000009.1	Protein Homology	CDS	66856	67296	.	-	0	ID=cds-WP_001830816.1;Parent=gene-CP553_RS04725;Dbxref=GenBank:WP_001830816.1;Name=WP_001830816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484453.1;locus_tag=CP553_RS04725;product=SACOL1771 family peroxiredoxin;protein_id=WP_001830816.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	67374	68120	.	+	.	ID=gene-CP553_RS04730;Name=CP553_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04730;old_locus_tag=CP553_04885
NZ_PCFD01000009.1	Protein Homology	CDS	67374	68120	.	+	0	ID=cds-WP_001832720.1;Parent=gene-CP553_RS04730;Dbxref=GenBank:WP_001832720.1;Name=WP_001832720.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832720.1;locus_tag=CP553_RS04730;product=glycerophosphodiester phosphodiesterase;protein_id=WP_001832720.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	68390	68992	.	-	.	ID=gene-CP553_RS04735;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=CP553_RS04735;old_locus_tag=CP553_04890
NZ_PCFD01000009.1	Protein Homology	CDS	68390	68992	.	-	0	ID=cds-WP_001830798.1;Parent=gene-CP553_RS04735;Dbxref=GenBank:WP_001830798.1;Name=WP_001830798.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1;locus_tag=CP553_RS04735;product=30S ribosomal protein S4;protein_id=WP_001830798.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	69213	69683	.	-	.	ID=gene-CP553_RS04740;Name=CP553_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04740;old_locus_tag=CP553_04900
NZ_PCFD01000009.1	Protein Homology	CDS	69213	69683	.	-	0	ID=cds-WP_001830812.1;Parent=gene-CP553_RS04740;Dbxref=GenBank:WP_001830812.1;Name=WP_001830812.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830812.1;locus_tag=CP553_RS04740;product=GAF domain-containing protein;protein_id=WP_001830812.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	69818	71512	.	+	.	ID=gene-CP553_RS04745;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=CP553_RS04745;old_locus_tag=CP553_04905
NZ_PCFD01000009.1	Protein Homology	CDS	69818	71512	.	+	0	ID=cds-WP_001830796.1;Parent=gene-CP553_RS04745;Dbxref=GenBank:WP_001830796.1;Name=WP_001830796.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500332.1;locus_tag=CP553_RS04745;product=septation ring formation regulator EzrA;protein_id=WP_001830796.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	71842	72981	.	+	.	ID=gene-CP553_RS04750;Name=CP553_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04750;old_locus_tag=CP553_04910
NZ_PCFD01000009.1	Protein Homology	CDS	71842	72981	.	+	0	ID=cds-WP_001830860.1;Parent=gene-CP553_RS04750;Dbxref=GenBank:WP_001830860.1;Name=WP_001830860.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830860.1;locus_tag=CP553_RS04750;product=cysteine desulfurase family protein;protein_id=WP_001830860.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	72981	74204	.	+	.	ID=gene-CP553_RS04755;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=CP553_RS04755;old_locus_tag=CP553_04915
NZ_PCFD01000009.1	Protein Homology	CDS	72981	74204	.	+	0	ID=cds-WP_001830758.1;Parent=gene-CP553_RS04755;Dbxref=GenBank:WP_001830758.1;Name=WP_001830758.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474712.1;locus_tag=CP553_RS04755;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_001830758.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	74244	75008	.	+	.	ID=gene-CP553_RS04760;Name=CP553_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04760;old_locus_tag=CP553_04920
NZ_PCFD01000009.1	Protein Homology	CDS	74244	75008	.	+	0	ID=cds-WP_001830743.1;Parent=gene-CP553_RS04760;Dbxref=GenBank:WP_001830743.1;Name=WP_001830743.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465278.1;locus_tag=CP553_RS04760;product=sulfite exporter TauE/SafE family protein;protein_id=WP_001830743.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	75250	75744	.	+	.	ID=gene-CP553_RS04765;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=CP553_RS04765;old_locus_tag=CP553_04925
NZ_PCFD01000009.1	Protein Homology	CDS	75250	75744	.	+	0	ID=cds-WP_001832701.1;Parent=gene-CP553_RS04765;Dbxref=GenBank:WP_001832701.1;Name=WP_001832701.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500327.1;locus_tag=CP553_RS04765;product=thiol peroxidase;protein_id=WP_001832701.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	75873	76820	.	+	.	ID=gene-CP553_RS04770;Name=CP553_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04770;old_locus_tag=CP553_04930
NZ_PCFD01000009.1	Protein Homology	CDS	75873	76820	.	+	0	ID=cds-WP_001832682.1;Parent=gene-CP553_RS04770;Dbxref=GenBank:WP_001832682.1;Name=WP_001832682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500326.1;locus_tag=CP553_RS04770;product=class I SAM-dependent methyltransferase;protein_id=WP_001832682.1;transl_table=11
NZ_PCFD01000009.1	RefSeq	gene	76909	78162	.	+	.	ID=gene-CP553_RS04775;Name=CP553_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04775;old_locus_tag=CP553_04935
NZ_PCFD01000009.1	Protein Homology	CDS	76909	78162	.	+	0	ID=cds-WP_001830869.1;Parent=gene-CP553_RS04775;Dbxref=GenBank:WP_001830869.1;Name=WP_001830869.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834572.1;locus_tag=CP553_RS04775;product=acetate kinase;protein_id=WP_001830869.1;transl_table=11
##sequence-region NZ_PCFD01000010.1 1 66631
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000010.1	RefSeq	region	1	66631	.	+	.	ID=NZ_PCFD01000010.1:1..66631;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000010.1	RefSeq	gene	1	125	.	-	.	ID=gene-CP553_RS04780;Name=CP553_RS04780;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS04780;old_locus_tag=CP553_04940;partial=true;start_range=.,1
NZ_PCFD01000010.1	cmsearch	rRNA	1	125	.	-	.	ID=rna-CP553_RS04780;Parent=gene-CP553_RS04780;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS04780;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000010.1	cmsearch	exon	1	125	.	-	.	ID=exon-CP553_RS04780-1;Parent=rna-CP553_RS04780;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS04780;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000010.1	RefSeq	gene	776	1228	.	-	.	ID=gene-CP553_RS04785;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=CP553_RS04785;old_locus_tag=CP553_04945
NZ_PCFD01000010.1	Protein Homology	CDS	776	1228	.	-	0	ID=cds-WP_001830391.1;Parent=gene-CP553_RS04785;Dbxref=GenBank:WP_001830391.1;Name=WP_001830391.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473927.1;locus_tag=CP553_RS04785;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_001830391.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	1324	2274	.	-	.	ID=gene-CP553_RS04790;Name=CP553_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04790;old_locus_tag=CP553_04950
NZ_PCFD01000010.1	Protein Homology	CDS	1324	2274	.	-	0	ID=cds-WP_001830448.1;Parent=gene-CP553_RS04790;Dbxref=GenBank:WP_001830448.1;Name=WP_001830448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020365541.1;locus_tag=CP553_RS04790;product=phosphoglycerate dehydrogenase;protein_id=WP_001830448.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	2277	2735	.	-	.	ID=gene-CP553_RS04795;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=CP553_RS04795;old_locus_tag=CP553_04955
NZ_PCFD01000010.1	Protein Homology	CDS	2277	2735	.	-	0	ID=cds-WP_001830449.1;Parent=gene-CP553_RS04795;Dbxref=GenBank:WP_001830449.1;Name=WP_001830449.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498651.1;locus_tag=CP553_RS04795;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001830449.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	2816	4105	.	+	.	ID=gene-CP553_RS04800;Name=CP553_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04800;old_locus_tag=CP553_04960
NZ_PCFD01000010.1	Protein Homology	CDS	2816	4105	.	+	0	ID=cds-WP_001830429.1;Parent=gene-CP553_RS04800;Dbxref=GenBank:WP_001830429.1;Name=WP_001830429.1;Ontology_term=GO:0033014,GO:0030170,GO:0042286;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500497.2;locus_tag=CP553_RS04800;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_001830429.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	4412	5506	.	+	.	ID=gene-CP553_RS04805;Name=CP553_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04805;old_locus_tag=CP553_04965
NZ_PCFD01000010.1	Protein Homology	CDS	4412	5506	.	+	0	ID=cds-WP_001830402.1;Parent=gene-CP553_RS04805;Dbxref=GenBank:WP_001830402.1;Name=WP_001830402.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484893.1;locus_tag=CP553_RS04805;product=FUSC family protein;protein_id=WP_001830402.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	5666	7402	.	-	.	ID=gene-CP553_RS04810;Name=CP553_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04810;old_locus_tag=CP553_04970
NZ_PCFD01000010.1	Protein Homology	CDS	5666	7402	.	-	0	ID=cds-WP_001830383.1;Parent=gene-CP553_RS04810;Dbxref=GenBank:WP_001830383.1;Name=WP_001830383.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500500.1;locus_tag=CP553_RS04810;product=ABC transporter ATP-binding protein;protein_id=WP_001830383.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	7644	8186	.	-	.	ID=gene-CP553_RS04815;Name=ntdP;gbkey=Gene;gene=ntdP;gene_biotype=protein_coding;locus_tag=CP553_RS04815;old_locus_tag=CP553_04975
NZ_PCFD01000010.1	Protein Homology	CDS	7644	8186	.	-	0	ID=cds-WP_001830384.1;Parent=gene-CP553_RS04815;Dbxref=GenBank:WP_001830384.1;Name=WP_001830384.1;Ontology_term=GO:0009116,GO:0017110,GO:0017111;gbkey=CDS;gene=ntdP;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500501.1;locus_tag=CP553_RS04815;product=nucleoside tri-diphosphate phosphatase;protein_id=WP_001830384.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	8293	9336	.	-	.	ID=gene-CP553_RS04820;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=CP553_RS04820;old_locus_tag=CP553_04980
NZ_PCFD01000010.1	Protein Homology	CDS	8293	9336	.	-	0	ID=cds-WP_001830413.1;Parent=gene-CP553_RS04820;Dbxref=GenBank:WP_001830413.1;Name=WP_001830413.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458540.1;locus_tag=CP553_RS04820;product=A/G-specific adenine glycosylase;protein_id=WP_001830413.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	9517	10491	.	+	.	ID=gene-CP553_RS04825;Name=CP553_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04825;old_locus_tag=CP553_04985
NZ_PCFD01000010.1	Protein Homology	CDS	9517	10491	.	+	0	ID=cds-WP_001830424.1;Parent=gene-CP553_RS04825;Dbxref=GenBank:WP_001830424.1;Name=WP_001830424.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503589.1;locus_tag=CP553_RS04825;product=metal-dependent hydrolase;protein_id=WP_001830424.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	10677	11507	.	-	.	ID=gene-CP553_RS04830;Name=CP553_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04830;old_locus_tag=CP553_04990
NZ_PCFD01000010.1	Protein Homology	CDS	10677	11507	.	-	0	ID=cds-WP_001830426.1;Parent=gene-CP553_RS04830;Dbxref=GenBank:WP_001830426.1;Name=WP_001830426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503588.1;locus_tag=CP553_RS04830;product=membrane protein;protein_id=WP_001830426.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	11516	13033	.	-	.	ID=gene-CP553_RS04835;Name=CP553_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04835;old_locus_tag=CP553_04995
NZ_PCFD01000010.1	Protein Homology	CDS	11516	13033	.	-	0	ID=cds-WP_001830434.1;Parent=gene-CP553_RS04835;Dbxref=GenBank:WP_001830434.1;Name=WP_001830434.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501580.1;locus_tag=CP553_RS04835;product=ATP-binding cassette domain-containing protein;protein_id=WP_001830434.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	13049	13363	.	-	.	ID=gene-CP553_RS04840;Name=CP553_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04840;old_locus_tag=CP553_05000
NZ_PCFD01000010.1	Protein Homology	CDS	13049	13363	.	-	0	ID=cds-WP_001830430.1;Parent=gene-CP553_RS04840;Dbxref=GenBank:WP_001830430.1;Name=WP_001830430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830430.1;locus_tag=CP553_RS04840;product=YfhH family protein;protein_id=WP_001830430.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	13356	14159	.	-	.	ID=gene-CP553_RS04845;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=CP553_RS04845;old_locus_tag=CP553_05005
NZ_PCFD01000010.1	Protein Homology	CDS	13356	14159	.	-	0	ID=cds-WP_001830417.1;Parent=gene-CP553_RS04845;Dbxref=GenBank:WP_001830417.1;Name=WP_001830417.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477604.1;locus_tag=CP553_RS04845;product=recombination regulator RecX;protein_id=WP_001830417.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	14437	15246	.	-	.	ID=gene-CP553_RS04850;Name=sgtB;gbkey=Gene;gene=sgtB;gene_biotype=protein_coding;locus_tag=CP553_RS04850;old_locus_tag=CP553_05010
NZ_PCFD01000010.1	Protein Homology	CDS	14437	15246	.	-	0	ID=cds-WP_001830409.1;Parent=gene-CP553_RS04850;Dbxref=GenBank:WP_001830409.1;Name=WP_001830409.1;gbkey=CDS;gene=sgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830409.1;locus_tag=CP553_RS04850;product=monofunctional peptidoglycan glycosyltransferase SgtB;protein_id=WP_001830409.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	15567	16085	.	-	.	ID=gene-CP553_RS04855;Name=CP553_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04855;old_locus_tag=CP553_05015
NZ_PCFD01000010.1	Protein Homology	CDS	15567	16085	.	-	0	ID=cds-WP_001830414.1;Parent=gene-CP553_RS04855;Dbxref=GenBank:WP_001830414.1;Name=WP_001830414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303361.1;locus_tag=CP553_RS04855;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_001830414.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	16385	16546	.	-	.	ID=gene-CP553_RS04860;Name=CP553_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04860;old_locus_tag=CP553_05020
NZ_PCFD01000010.1	Protein Homology	CDS	16385	16546	.	-	0	ID=cds-WP_001830395.1;Parent=gene-CP553_RS04860;Dbxref=GenBank:WP_001830395.1;Name=WP_001830395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500511.1;locus_tag=CP553_RS04860;product=SE1561 family protein;protein_id=WP_001830395.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	16705	17847	.	+	.	ID=gene-CP553_RS04865;Name=yfkAB;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=CP553_RS04865;old_locus_tag=CP553_05025
NZ_PCFD01000010.1	Protein Homology	CDS	16705	17847	.	+	0	ID=cds-WP_001830386.1;Parent=gene-CP553_RS04865;Dbxref=GenBank:WP_001830386.1;Name=WP_001830386.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;gene=yfkAB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458544.1;locus_tag=CP553_RS04865;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=WP_001830386.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	17984	18514	.	-	.	ID=gene-CP553_RS04870;Name=CP553_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04870;old_locus_tag=CP553_05030
NZ_PCFD01000010.1	Protein Homology	CDS	17984	18514	.	-	0	ID=cds-WP_001830371.1;Parent=gene-CP553_RS04870;Dbxref=GenBank:WP_001830371.1;Name=WP_001830371.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830371.1;locus_tag=CP553_RS04870;product=acyl-CoA thioesterase;protein_id=WP_001830371.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	18594	19835	.	-	.	ID=gene-CP553_RS04875;Name=CP553_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04875;old_locus_tag=CP553_05035
NZ_PCFD01000010.1	Protein Homology	CDS	18594	19835	.	-	0	ID=cds-WP_001832467.1;Parent=gene-CP553_RS04875;Dbxref=GenBank:WP_001832467.1;Name=WP_001832467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494624.1;locus_tag=CP553_RS04875;product=aminopeptidase;protein_id=WP_001832467.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	19837	20052	.	-	.	ID=gene-CP553_RS04880;Name=CP553_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04880;old_locus_tag=CP553_05040
NZ_PCFD01000010.1	Protein Homology	CDS	19837	20052	.	-	0	ID=cds-WP_001830421.1;Parent=gene-CP553_RS04880;Dbxref=GenBank:WP_001830421.1;Name=WP_001830421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494128.1;locus_tag=CP553_RS04880;product=DUF1128 domain-containing protein;protein_id=WP_001830421.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	20193	20657	.	+	.	ID=gene-CP553_RS04885;Name=CP553_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04885;old_locus_tag=CP553_05045
NZ_PCFD01000010.1	Protein Homology	CDS	20193	20657	.	+	0	ID=cds-WP_001830437.1;Parent=gene-CP553_RS04885;Dbxref=GenBank:WP_001830437.1;Name=WP_001830437.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002957213.1;locus_tag=CP553_RS04885;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_001830437.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	20665	20949	.	+	.	ID=gene-CP553_RS04890;Name=CP553_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04890;old_locus_tag=CP553_05050
NZ_PCFD01000010.1	Protein Homology	CDS	20665	20949	.	+	0	ID=cds-WP_001830401.1;Parent=gene-CP553_RS04890;Dbxref=GenBank:WP_001830401.1;Name=WP_001830401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435890.1;locus_tag=CP553_RS04890;product=YtxH domain-containing protein;protein_id=WP_001830401.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	21356	22534	.	+	.	ID=gene-CP553_RS04895;Name=CP553_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04895;old_locus_tag=CP553_05055
NZ_PCFD01000010.1	Protein Homology	CDS	21356	22534	.	+	0	ID=cds-WP_021298785.1;Parent=gene-CP553_RS04895;Dbxref=GenBank:WP_021298785.1;Name=WP_021298785.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485151.1;locus_tag=CP553_RS04895;product=YihY/virulence factor BrkB family protein;protein_id=WP_021298785.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	22591	23220	.	-	.	ID=gene-CP553_RS04900;Name=vraR;gbkey=Gene;gene=vraR;gene_biotype=protein_coding;locus_tag=CP553_RS04900;old_locus_tag=CP553_05060
NZ_PCFD01000010.1	Protein Homology	CDS	22591	23220	.	-	0	ID=cds-WP_001830439.1;Parent=gene-CP553_RS04900;Dbxref=GenBank:WP_001830439.1;Name=WP_001830439.1;gbkey=CDS;gene=vraR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500589.1;locus_tag=CP553_RS04900;product=response regulator transcription factor VraR;protein_id=WP_001830439.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	23210	24256	.	-	.	ID=gene-CP553_RS04905;Name=vraS;gbkey=Gene;gene=vraS;gene_biotype=protein_coding;locus_tag=CP553_RS04905;old_locus_tag=CP553_05065
NZ_PCFD01000010.1	Protein Homology	CDS	23210	24256	.	-	0	ID=cds-WP_001830374.1;Parent=gene-CP553_RS04905;Dbxref=GenBank:WP_001830374.1;Name=WP_001830374.1;gbkey=CDS;gene=vraS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275375.1;locus_tag=CP553_RS04905;product=sensor histidine kinase VraS;protein_id=WP_001830374.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	24253	24954	.	-	.	ID=gene-CP553_RS04910;Name=vraT;gbkey=Gene;gene=vraT;gene_biotype=protein_coding;locus_tag=CP553_RS04910;old_locus_tag=CP553_05070
NZ_PCFD01000010.1	Protein Homology	CDS	24253	24954	.	-	0	ID=cds-WP_001830436.1;Parent=gene-CP553_RS04910;Dbxref=GenBank:WP_001830436.1;Name=WP_001830436.1;gbkey=CDS;gene=vraT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500591.1;locus_tag=CP553_RS04910;product=cell wall-active antibiotics response protein VraT;protein_id=WP_001830436.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	24969	25355	.	-	.	ID=gene-CP553_RS04915;Name=CP553_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04915;old_locus_tag=CP553_05075
NZ_PCFD01000010.1	Protein Homology	CDS	24969	25355	.	-	0	ID=cds-WP_001830382.1;Parent=gene-CP553_RS04915;Dbxref=GenBank:WP_001830382.1;Name=WP_001830382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458548.1;locus_tag=CP553_RS04915;product=hypothetical protein;protein_id=WP_001830382.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	25513	26268	.	-	.	ID=gene-CP553_RS04920;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=CP553_RS04920;old_locus_tag=CP553_05080
NZ_PCFD01000010.1	Protein Homology	CDS	25513	26268	.	-	0	ID=cds-WP_001830397.1;Parent=gene-CP553_RS04920;Dbxref=GenBank:WP_001830397.1;Name=WP_001830397.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830397.1;locus_tag=CP553_RS04920;product=type I methionyl aminopeptidase;protein_id=WP_001830397.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	26442	27428	.	+	.	ID=gene-CP553_RS04925;Name=CP553_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04925;old_locus_tag=CP553_05085
NZ_PCFD01000010.1	Protein Homology	CDS	26442	27428	.	+	0	ID=cds-WP_001830388.1;Parent=gene-CP553_RS04925;Dbxref=GenBank:WP_001830388.1;Name=WP_001830388.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494125.1;locus_tag=CP553_RS04925;product=FUSC family protein;protein_id=WP_001830388.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	27579	28115	.	-	.	ID=gene-CP553_RS04930;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=CP553_RS04930;old_locus_tag=CP553_05090
NZ_PCFD01000010.1	Protein Homology	CDS	27579	28115	.	-	0	ID=cds-WP_001830372.1;Parent=gene-CP553_RS04930;Dbxref=GenBank:WP_001830372.1;Name=WP_001830372.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830372.1;locus_tag=CP553_RS04930;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_001830372.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	28556	29281	.	-	.	ID=gene-CP553_RS04935;Name=CP553_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04935;old_locus_tag=CP553_05095
NZ_PCFD01000010.1	Protein Homology	CDS	28556	29281	.	-	0	ID=cds-WP_116842990.1;Parent=gene-CP553_RS04935;Dbxref=GenBank:WP_116842990.1;Name=WP_116842990.1;Ontology_term=GO:0004359;gbkey=CDS;go_function=glutaminase activity|0004359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447447.1;locus_tag=CP553_RS04935;product=type 1 glutamine amidotransferase;protein_id=WP_116842990.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	29283	30596	.	-	.	ID=gene-CP553_RS04940;Name=CP553_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04940;old_locus_tag=CP553_05100
NZ_PCFD01000010.1	Protein Homology	CDS	29283	30596	.	-	0	ID=cds-WP_001830445.1;Parent=gene-CP553_RS04940;Dbxref=GenBank:WP_001830445.1;Name=WP_001830445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500599.1;locus_tag=CP553_RS04940;product=Mur ligase family protein;protein_id=WP_001830445.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	30818	31318	.	+	.	ID=gene-CP553_RS04945;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=CP553_RS04945;old_locus_tag=CP553_05105
NZ_PCFD01000010.1	Protein Homology	CDS	30818	31318	.	+	0	ID=cds-WP_001830392.1;Parent=gene-CP553_RS04945;Dbxref=GenBank:WP_001830392.1;Name=WP_001830392.1;gbkey=CDS;gene=ftnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500600.1;locus_tag=CP553_RS04945;product=H-type ferritin FtnA;protein_id=WP_001830392.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	31507	32061	.	+	.	ID=gene-CP553_RS04950;Name=CP553_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04950;old_locus_tag=CP553_05110
NZ_PCFD01000010.1	Protein Homology	CDS	31507	32061	.	+	0	ID=cds-WP_001830405.1;Parent=gene-CP553_RS04950;Dbxref=GenBank:WP_001830405.1;Name=WP_001830405.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500602.1;locus_tag=CP553_RS04950;product=3'-5' exonuclease;protein_id=WP_001830405.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	32092	33162	.	-	.	ID=gene-CP553_RS04955;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=CP553_RS04955;old_locus_tag=CP553_05115
NZ_PCFD01000010.1	Protein Homology	CDS	32092	33162	.	-	0	ID=cds-WP_001830390.1;Parent=gene-CP553_RS04955;Dbxref=GenBank:WP_001830390.1;Name=WP_001830390.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302771.1;locus_tag=CP553_RS04955;product=DNA polymerase IV;protein_id=WP_001830390.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	33473	34015	.	-	.	ID=gene-CP553_RS04960;Name=CP553_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04960;old_locus_tag=CP553_05120
NZ_PCFD01000010.1	Protein Homology	CDS	33473	34015	.	-	0	ID=cds-WP_001830365.1;Parent=gene-CP553_RS04960;Dbxref=GenBank:WP_001830365.1;Name=WP_001830365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465003.1;locus_tag=CP553_RS04960;product=DUF3267 domain-containing protein;protein_id=WP_001830365.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	34159	35529	.	-	.	ID=gene-CP553_RS04965;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=CP553_RS04965;old_locus_tag=CP553_05125
NZ_PCFD01000010.1	Protein Homology	CDS	34159	35529	.	-	0	ID=cds-WP_001830400.1;Parent=gene-CP553_RS04965;Dbxref=GenBank:WP_001830400.1;Name=WP_001830400.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363302.1;locus_tag=CP553_RS04965;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_001830400.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	35609	36559	.	-	.	ID=gene-CP553_RS04970;Name=CP553_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04970;old_locus_tag=CP553_05130
NZ_PCFD01000010.1	Protein Homology	CDS	35609	36559	.	-	0	ID=cds-WP_001830377.1;Parent=gene-CP553_RS04970;Dbxref=GenBank:WP_001830377.1;Name=WP_001830377.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475849.1;locus_tag=CP553_RS04970;product=diacylglycerol kinase;protein_id=WP_001830377.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	36784	38211	.	-	.	ID=gene-CP553_RS04975;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CP553_RS04975;old_locus_tag=CP553_05135
NZ_PCFD01000010.1	Protein Homology	CDS	36784	38211	.	-	0	ID=cds-WP_001830416.1;Parent=gene-CP553_RS04975;Dbxref=GenBank:WP_001830416.1;Name=WP_001830416.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453613.1;locus_tag=CP553_RS04975;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_001830416.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	38224	39681	.	-	.	ID=gene-CP553_RS04980;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=CP553_RS04980;old_locus_tag=CP553_05140
NZ_PCFD01000010.1	Protein Homology	CDS	38224	39681	.	-	0	ID=cds-WP_001830403.1;Parent=gene-CP553_RS04980;Dbxref=GenBank:WP_001830403.1;Name=WP_001830403.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500609.1;locus_tag=CP553_RS04980;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_001830403.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	39683	39985	.	-	.	ID=gene-CP553_RS04985;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=CP553_RS04985;old_locus_tag=CP553_05145
NZ_PCFD01000010.1	Protein Homology	CDS	39683	39985	.	-	0	ID=cds-WP_001830435.1;Parent=gene-CP553_RS04985;Dbxref=GenBank:WP_001830435.1;Name=WP_001830435.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500610.1;locus_tag=CP553_RS04985;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_001830435.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	40363	41898	.	+	.	ID=gene-CP553_RS04990;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=CP553_RS04990;old_locus_tag=CP553_05150
NZ_PCFD01000010.1	Protein Homology	CDS	40363	41898	.	+	0	ID=cds-WP_001830425.1;Parent=gene-CP553_RS04990;Dbxref=GenBank:WP_001830425.1;Name=WP_001830425.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458554.1;locus_tag=CP553_RS04990;product=sodium/proline symporter PutP;protein_id=WP_001830425.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	42226	43434	.	-	.	ID=gene-CP553_RS04995;Name=CP553_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS04995;old_locus_tag=CP553_05155
NZ_PCFD01000010.1	Protein Homology	CDS	42226	43434	.	-	0	ID=cds-WP_001830442.1;Parent=gene-CP553_RS04995;Dbxref=GenBank:WP_001830442.1;Name=WP_001830442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500612.1;locus_tag=CP553_RS04995;product=CamS family sex pheromone protein;protein_id=WP_001830442.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	43454	45451	.	-	.	ID=gene-CP553_RS05000;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CP553_RS05000;old_locus_tag=CP553_05160
NZ_PCFD01000010.1	Protein Homology	CDS	43454	45451	.	-	0	ID=cds-WP_002440422.1;Parent=gene-CP553_RS05000;Dbxref=GenBank:WP_002440422.1;Name=WP_002440422.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020359868.1;locus_tag=CP553_RS05000;product=NAD-dependent DNA ligase LigA;protein_id=WP_002440422.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	45455	47644	.	-	.	ID=gene-CP553_RS05005;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=CP553_RS05005;old_locus_tag=CP553_05165
NZ_PCFD01000010.1	Protein Homology	CDS	45455	47644	.	-	0	ID=cds-WP_002440420.1;Parent=gene-CP553_RS05005;Dbxref=GenBank:WP_002440420.1;Name=WP_002440420.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457083.1;locus_tag=CP553_RS05005;product=DNA helicase PcrA;protein_id=WP_002440420.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	47641	48333	.	-	.	ID=gene-CP553_RS05010;Name=CP553_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05010;old_locus_tag=CP553_05170
NZ_PCFD01000010.1	Protein Homology	CDS	47641	48333	.	-	0	ID=cds-WP_001830396.1;Parent=gene-CP553_RS05010;Dbxref=GenBank:WP_001830396.1;Name=WP_001830396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490295.1;locus_tag=CP553_RS05010;product=heptaprenylglyceryl phosphate synthase;protein_id=WP_001830396.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	48657	48959	.	-	.	ID=gene-CP553_RS05015;Name=CP553_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05015;old_locus_tag=CP553_05175
NZ_PCFD01000010.1	Protein Homology	CDS	48657	48959	.	-	0	ID=cds-WP_001830443.1;Parent=gene-CP553_RS05015;Dbxref=GenBank:WP_001830443.1;Name=WP_001830443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830443.1;locus_tag=CP553_RS05015;product=YerC/YecD family TrpR-related protein;protein_id=WP_001830443.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	49084	50379	.	-	.	ID=gene-CP553_RS05020;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=CP553_RS05020;old_locus_tag=CP553_05180
NZ_PCFD01000010.1	Protein Homology	CDS	49084	50379	.	-	0	ID=cds-WP_002440416.1;Parent=gene-CP553_RS05020;Dbxref=GenBank:WP_002440416.1;Name=WP_002440416.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500617.1;locus_tag=CP553_RS05020;product=adenylosuccinate lyase;protein_id=WP_002440416.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	50791	50970	.	-	.	ID=gene-CP553_RS05025;Name=CP553_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05025;old_locus_tag=CP553_05185
NZ_PCFD01000010.1	Protein Homology	CDS	50791	50970	.	-	0	ID=cds-WP_001830380.1;Parent=gene-CP553_RS05025;Dbxref=GenBank:WP_001830380.1;Name=WP_001830380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447465.1;locus_tag=CP553_RS05025;product=NETI motif-containing protein;protein_id=WP_001830380.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	50954	51580	.	-	.	ID=gene-CP553_RS05030;Name=CP553_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05030;old_locus_tag=CP553_05190
NZ_PCFD01000010.1	Protein Homology	CDS	50954	51580	.	-	0	ID=cds-WP_001830398.1;Parent=gene-CP553_RS05030;Dbxref=GenBank:WP_001830398.1;Name=WP_001830398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489902.1;locus_tag=CP553_RS05030;product=DUF2179 domain-containing protein;protein_id=WP_001830398.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	51654	52481	.	-	.	ID=gene-CP553_RS05035;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=CP553_RS05035;old_locus_tag=CP553_05195
NZ_PCFD01000010.1	Protein Homology	CDS	51654	52481	.	-	0	ID=cds-WP_002455874.1;Parent=gene-CP553_RS05035;Dbxref=GenBank:WP_002455874.1;Name=WP_002455874.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455874.1;locus_tag=CP553_RS05035;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_002455874.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	52474	53943	.	-	.	ID=gene-CP553_RS05040;Name=CP553_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05040;old_locus_tag=CP553_05200
NZ_PCFD01000010.1	Protein Homology	CDS	52474	53943	.	-	0	ID=cds-WP_001830368.1;Parent=gene-CP553_RS05040;Dbxref=GenBank:WP_001830368.1;Name=WP_001830368.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500623.2;locus_tag=CP553_RS05040;product=nicotinate phosphoribosyltransferase;protein_id=WP_001830368.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	54135	55202	.	+	.	ID=gene-CP553_RS05045;Name=CP553_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05045;old_locus_tag=CP553_05205
NZ_PCFD01000010.1	Protein Homology	CDS	54135	55202	.	+	0	ID=cds-WP_001830408.1;Parent=gene-CP553_RS05045;Dbxref=GenBank:WP_001830408.1;Name=WP_001830408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470334.1;locus_tag=CP553_RS05045;product=nitric oxide synthase oxygenase;protein_id=WP_001830408.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	55221	56024	.	+	.	ID=gene-CP553_RS05050;Name=CP553_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05050;old_locus_tag=CP553_05210
NZ_PCFD01000010.1	Protein Homology	CDS	55221	56024	.	+	0	ID=cds-WP_064635308.1;Parent=gene-CP553_RS05050;Dbxref=GenBank:WP_064635308.1;Name=WP_064635308.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447470.1;locus_tag=CP553_RS05050;product=prephenate dehydratase;protein_id=WP_064635308.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	56475	57572	.	-	.	ID=gene-CP553_RS05055;Name=CP553_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05055;old_locus_tag=CP553_05215
NZ_PCFD01000010.1	Protein Homology	CDS	56475	57572	.	-	0	ID=cds-WP_001830422.1;Parent=gene-CP553_RS05055;Dbxref=GenBank:WP_001830422.1;Name=WP_001830422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477581.1;locus_tag=CP553_RS05055;product=glycosyl hydrolase family 28-related protein;protein_id=WP_001830422.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	57764	58318	.	+	.	ID=gene-CP553_RS05060;Name=CP553_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05060;old_locus_tag=CP553_05220
NZ_PCFD01000010.1	Protein Homology	CDS	57764	58318	.	+	0	ID=cds-WP_001830406.1;Parent=gene-CP553_RS05060;Dbxref=GenBank:WP_001830406.1;Name=WP_001830406.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464994.1;locus_tag=CP553_RS05060;product=isochorismatase family cysteine hydrolase;protein_id=WP_001830406.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	58373	59302	.	+	.	ID=gene-CP553_RS05065;Name=CP553_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05065;old_locus_tag=CP553_05225
NZ_PCFD01000010.1	Protein Homology	CDS	58373	59302	.	+	0	ID=cds-WP_001830428.1;Parent=gene-CP553_RS05065;Dbxref=GenBank:WP_001830428.1;Name=WP_001830428.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500630.1;locus_tag=CP553_RS05065;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_001830428.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	59602	60981	.	+	.	ID=gene-CP553_RS05070;Name=CP553_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05070;old_locus_tag=CP553_05230
NZ_PCFD01000010.1	Protein Homology	CDS	59602	60981	.	+	0	ID=cds-WP_001830423.1;Parent=gene-CP553_RS05070;Dbxref=GenBank:WP_001830423.1;Name=WP_001830423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830423.1;locus_tag=CP553_RS05070;product=aldehyde dehydrogenase;protein_id=WP_001830423.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	61093	62121	.	-	.	ID=gene-CP553_RS05075;Name=pglS;gbkey=Gene;gene=pglS;gene_biotype=protein_coding;gene_synonym=pgl;locus_tag=CP553_RS05075;old_locus_tag=CP553_05235
NZ_PCFD01000010.1	Protein Homology	CDS	61093	62121	.	-	0	ID=cds-WP_001830420.1;Parent=gene-CP553_RS05075;Dbxref=GenBank:WP_001830420.1;Name=WP_001830420.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pglS;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468109.1;locus_tag=CP553_RS05075;product=6-phosphogluconolactonase;protein_id=WP_001830420.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	62357	62755	.	+	.	ID=gene-CP553_RS05080;Name=CP553_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05080;old_locus_tag=CP553_05240
NZ_PCFD01000010.1	Protein Homology	CDS	62357	62755	.	+	0	ID=cds-WP_001830427.1;Parent=gene-CP553_RS05080;Dbxref=GenBank:WP_001830427.1;Name=WP_001830427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447477.1;locus_tag=CP553_RS05080;product=YolD-like family protein;protein_id=WP_001830427.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	62969	63139	.	-	.	ID=gene-CP553_RS05085;Name=CP553_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05085;old_locus_tag=CP553_05245
NZ_PCFD01000010.1	Protein Homology	CDS	62969	63139	.	-	0	ID=cds-WP_001830431.1;Parent=gene-CP553_RS05085;Dbxref=GenBank:WP_001830431.1;Name=WP_001830431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361552.1;locus_tag=CP553_RS05085;product=hypothetical protein;protein_id=WP_001830431.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	63521	64561	.	+	.	ID=gene-CP553_RS05090;Name=CP553_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05090;old_locus_tag=CP553_05250
NZ_PCFD01000010.1	Protein Homology	CDS	63521	64561	.	+	0	ID=cds-WP_001830433.1;Parent=gene-CP553_RS05090;Dbxref=GenBank:WP_001830433.1;Name=WP_001830433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830433.1;locus_tag=CP553_RS05090;product=C45 family autoproteolytic acyltransferase/hydolase;protein_id=WP_001830433.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	64615	65451	.	-	.	ID=gene-CP553_RS05095;Name=CP553_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05095;old_locus_tag=CP553_05255
NZ_PCFD01000010.1	Protein Homology	CDS	64615	65451	.	-	0	ID=cds-WP_001830373.1;Parent=gene-CP553_RS05095;Dbxref=GenBank:WP_001830373.1;Name=WP_001830373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474157.1;locus_tag=CP553_RS05095;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_001830373.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	65448	66005	.	-	.	ID=gene-CP553_RS05100;Name=CP553_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05100;old_locus_tag=CP553_05260
NZ_PCFD01000010.1	Protein Homology	CDS	65448	66005	.	-	0	ID=cds-WP_001830393.1;Parent=gene-CP553_RS05100;Dbxref=GenBank:WP_001830393.1;Name=WP_001830393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830393.1;locus_tag=CP553_RS05100;product=DUF1700 domain-containing protein;protein_id=WP_001830393.1;transl_table=11
NZ_PCFD01000010.1	RefSeq	gene	66058	66543	.	-	.	ID=gene-CP553_RS05105;Name=CP553_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05105;old_locus_tag=CP553_05265
NZ_PCFD01000010.1	Protein Homology	CDS	66058	66543	.	-	0	ID=cds-WP_001830370.1;Parent=gene-CP553_RS05105;Dbxref=GenBank:WP_001830370.1;Name=WP_001830370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830370.1;locus_tag=CP553_RS05105;product=hypothetical protein;protein_id=WP_001830370.1;transl_table=11
##sequence-region NZ_PCFD01000011.1 1 63316
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000011.1	RefSeq	region	1	63316	.	+	.	ID=NZ_PCFD01000011.1:1..63316;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000011.1	RefSeq	gene	78	1316	.	+	.	ID=gene-CP553_RS05110;Name=CP553_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05110;old_locus_tag=CP553_05270
NZ_PCFD01000011.1	Protein Homology	CDS	78	1316	.	+	0	ID=cds-WP_001833067.1;Parent=gene-CP553_RS05110;Dbxref=GenBank:WP_001833067.1;Name=WP_001833067.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493342.1;locus_tag=CP553_RS05110;product=LCP family protein;protein_id=WP_001833067.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	1364	1834	.	+	.	ID=gene-CP553_RS05115;Name=CP553_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05115;old_locus_tag=CP553_05275
NZ_PCFD01000011.1	Protein Homology	CDS	1364	1834	.	+	0	ID=cds-WP_001831729.1;Parent=gene-CP553_RS05115;Dbxref=GenBank:WP_001831729.1;Name=WP_001831729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499548.1;locus_tag=CP553_RS05115;product=DUF2538 family protein;protein_id=WP_001831729.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	2408	2830	.	+	.	ID=gene-CP553_RS05120;Name=CP553_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05120;old_locus_tag=CP553_05280
NZ_PCFD01000011.1	Protein Homology	CDS	2408	2830	.	+	0	ID=cds-WP_001831666.1;Parent=gene-CP553_RS05120;Dbxref=GenBank:WP_001831666.1;Name=WP_001831666.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491613.1;locus_tag=CP553_RS05120;product=GNAT family N-acetyltransferase;protein_id=WP_001831666.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	3071	7078	.	+	.	ID=gene-CP553_RS05125;Name=CP553_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05125;old_locus_tag=CP553_05285
NZ_PCFD01000011.1	Protein Homology	CDS	3071	7078	.	+	0	ID=cds-WP_001831665.1;Parent=gene-CP553_RS05125;Dbxref=GenBank:WP_001831665.1;Name=WP_001831665.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446137.1;locus_tag=CP553_RS05125;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_001831665.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	7318	7737	.	-	.	ID=gene-CP553_RS05130;Name=CP553_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05130;old_locus_tag=CP553_05290
NZ_PCFD01000011.1	Protein Homology	CDS	7318	7737	.	-	0	ID=cds-WP_001831691.1;Parent=gene-CP553_RS05130;Dbxref=GenBank:WP_001831691.1;Name=WP_001831691.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831691.1;locus_tag=CP553_RS05130;product=MarR family transcriptional regulator;protein_id=WP_001831691.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	7891	8898	.	+	.	ID=gene-CP553_RS05135;Name=CP553_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05135;old_locus_tag=CP553_05295
NZ_PCFD01000011.1	Protein Homology	CDS	7891	8898	.	+	0	ID=cds-WP_001833065.1;Parent=gene-CP553_RS05135;Dbxref=GenBank:WP_001833065.1;Name=WP_001833065.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486580.1;locus_tag=CP553_RS05135;product=acyltransferase family protein;protein_id=WP_001833065.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	9041	10225	.	+	.	ID=gene-CP553_RS05140;Name=CP553_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05140;old_locus_tag=CP553_05300
NZ_PCFD01000011.1	Protein Homology	CDS	9041	10225	.	+	0	ID=cds-WP_002439292.1;Parent=gene-CP553_RS05140;Dbxref=GenBank:WP_002439292.1;Name=WP_002439292.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500751.1;locus_tag=CP553_RS05140;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_002439292.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	10570	11388	.	-	.	ID=gene-CP553_RS05145;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=CP553_RS05145;old_locus_tag=CP553_05305
NZ_PCFD01000011.1	Protein Homology	CDS	10570	11388	.	-	0	ID=cds-WP_002439291.1;Parent=gene-CP553_RS05145;Dbxref=GenBank:WP_002439291.1;Name=WP_002439291.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899909.1;locus_tag=CP553_RS05145;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_002439291.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	11381	12184	.	-	.	ID=gene-CP553_RS05150;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=CP553_RS05150;old_locus_tag=CP553_05310
NZ_PCFD01000011.1	Protein Homology	CDS	11381	12184	.	-	0	ID=cds-WP_002439289.1;Parent=gene-CP553_RS05150;Dbxref=GenBank:WP_002439289.1;Name=WP_002439289.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495593.1;locus_tag=CP553_RS05150;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_002439289.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	12171	13844	.	-	.	ID=gene-CP553_RS05155;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=CP553_RS05155;old_locus_tag=CP553_05315
NZ_PCFD01000011.1	Protein Homology	CDS	12171	13844	.	-	0	ID=cds-WP_002439287.1;Parent=gene-CP553_RS05155;Dbxref=GenBank:WP_002439287.1;Name=WP_002439287.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499536.1;locus_tag=CP553_RS05155;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_002439287.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	13831	15192	.	-	.	ID=gene-CP553_RS05160;Name=CP553_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05160;old_locus_tag=CP553_05320
NZ_PCFD01000011.1	Protein Homology	CDS	13831	15192	.	-	0	ID=cds-WP_002439285.1;Parent=gene-CP553_RS05160;Dbxref=GenBank:WP_002439285.1;Name=WP_002439285.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439285.1;locus_tag=CP553_RS05160;product=isochorismate synthase;protein_id=WP_002439285.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	15371	16309	.	+	.	ID=gene-CP553_RS05165;Name=CP553_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05165;old_locus_tag=CP553_05330
NZ_PCFD01000011.1	Protein Homology	CDS	15371	16309	.	+	0	ID=cds-WP_001831680.1;Parent=gene-CP553_RS05165;Dbxref=GenBank:WP_001831680.1;Name=WP_001831680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499533.1;locus_tag=CP553_RS05165;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_001831680.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	16838	17395	.	-	.	ID=gene-CP553_RS05170;Name=CP553_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05170;old_locus_tag=CP553_05350
NZ_PCFD01000011.1	Protein Homology	CDS	16838	17395	.	-	0	ID=cds-WP_002439280.1;Parent=gene-CP553_RS05170;Dbxref=GenBank:WP_002439280.1;Name=WP_002439280.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486584.1;locus_tag=CP553_RS05170;product=GNAT family N-acetyltransferase;protein_id=WP_002439280.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	17626	17841	.	+	.	ID=gene-CP553_RS05175;Name=CP553_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05175;old_locus_tag=CP553_05360
NZ_PCFD01000011.1	Protein Homology	CDS	17626	17841	.	+	0	ID=cds-WP_001831694.1;Parent=gene-CP553_RS05175;Dbxref=GenBank:WP_001831694.1;Name=WP_001831694.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831694.1;locus_tag=CP553_RS05175;product=TM2 domain-containing protein;protein_id=WP_001831694.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	17946	18062	.	+	.	ID=gene-CP553_RS13030;Name=CP553_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS13030
NZ_PCFD01000011.1	Protein Homology	CDS	17946	18062	.	+	0	ID=cds-WP_353955880.1;Parent=gene-CP553_RS13030;Dbxref=GenBank:WP_353955880.1;Name=WP_353955880.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040879.1;locus_tag=CP553_RS13030;product=SAR1012 family small protein;protein_id=WP_353955880.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	18383	18913	.	+	.	ID=gene-CP553_RS05180;Name=CP553_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05180;old_locus_tag=CP553_05365
NZ_PCFD01000011.1	Protein Homology	CDS	18383	18913	.	+	0	ID=cds-WP_002439277.1;Parent=gene-CP553_RS05180;Dbxref=GenBank:WP_002439277.1;Name=WP_002439277.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276845.1;locus_tag=CP553_RS05180;product=GNAT family N-acetyltransferase;protein_id=WP_002439277.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	19149	19346	.	+	.	ID=gene-CP553_RS05185;Name=CP553_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05185;old_locus_tag=CP553_05370
NZ_PCFD01000011.1	Protein Homology	CDS	19149	19346	.	+	0	ID=cds-WP_002456096.1;Parent=gene-CP553_RS05185;Dbxref=GenBank:WP_002456096.1;Name=WP_002456096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456096.1;locus_tag=CP553_RS05185;product=hypothetical protein;protein_id=WP_002456096.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	pseudogene	19739	19972	.	-	.	ID=gene-CP553_RS05190;Name=CP553_RS05190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS05190;old_locus_tag=CP553_05375;partial=true;pseudo=true;start_range=.,19739
NZ_PCFD01000011.1	Protein Homology	CDS	19739	19972	.	-	0	ID=cds-CP553_RS05190;Parent=gene-CP553_RS05190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000700558.1;locus_tag=CP553_RS05190;partial=true;product=AAA family ATPase;pseudo=true;start_range=.,19739;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	20347	20670	.	+	.	ID=gene-CP553_RS05195;Name=CP553_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05195;old_locus_tag=CP553_05380
NZ_PCFD01000011.1	Protein Homology	CDS	20347	20670	.	+	0	ID=cds-WP_002456098.1;Parent=gene-CP553_RS05195;Dbxref=GenBank:WP_002456098.1;Name=WP_002456098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456098.1;locus_tag=CP553_RS05195;product=hypothetical protein;protein_id=WP_002456098.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	20653	20787	.	-	.	ID=gene-CP553_RS12880;Name=CP553_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12880
NZ_PCFD01000011.1	Protein Homology	CDS	20653	20787	.	-	0	ID=cds-WP_002439268.1;Parent=gene-CP553_RS12880;Dbxref=GenBank:WP_002439268.1;Name=WP_002439268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480769.1;locus_tag=CP553_RS12880;product=hypothetical protein;protein_id=WP_002439268.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	pseudogene	20801	21013	.	-	.	ID=gene-CP553_RS12755;Name=CP553_RS12755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12755;old_locus_tag=CP553_05385;pseudo=true
NZ_PCFD01000011.1	Protein Homology	CDS	20801	21013	.	-	0	ID=cds-CP553_RS12755;Parent=gene-CP553_RS12755;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453553.1;locus_tag=CP553_RS12755;product=DUF771 domain-containing protein;pseudo=true;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	21017	21781	.	-	.	ID=gene-CP553_RS05200;Name=CP553_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05200;old_locus_tag=CP553_05390
NZ_PCFD01000011.1	Protein Homology	CDS	21017	21781	.	-	0	ID=cds-WP_002439267.1;Parent=gene-CP553_RS05200;Dbxref=GenBank:WP_002439267.1;Name=WP_002439267.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439267.1;locus_tag=CP553_RS05200;product=phage antirepressor KilAC domain-containing protein;protein_id=WP_002439267.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	21831	22037	.	+	.	ID=gene-CP553_RS05205;Name=CP553_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05205;old_locus_tag=CP553_05395
NZ_PCFD01000011.1	Protein Homology	CDS	21831	22037	.	+	0	ID=cds-WP_002439266.1;Parent=gene-CP553_RS05205;Dbxref=GenBank:WP_002439266.1;Name=WP_002439266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504373.1;locus_tag=CP553_RS05205;product=hypothetical protein;protein_id=WP_002439266.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	22026	22190	.	-	.	ID=gene-CP553_RS05210;Name=CP553_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05210
NZ_PCFD01000011.1	Protein Homology	CDS	22026	22190	.	-	0	ID=cds-WP_002439265.1;Parent=gene-CP553_RS05210;Dbxref=GenBank:WP_002439265.1;Name=WP_002439265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439265.1;locus_tag=CP553_RS05210;product=hypothetical protein;protein_id=WP_002439265.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	22187	22441	.	-	.	ID=gene-CP553_RS05215;Name=CP553_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05215;old_locus_tag=CP553_05400
NZ_PCFD01000011.1	Protein Homology	CDS	22187	22441	.	-	0	ID=cds-WP_002439263.1;Parent=gene-CP553_RS05215;Dbxref=GenBank:WP_002439263.1;Name=WP_002439263.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505715.1;locus_tag=CP553_RS05215;product=helix-turn-helix domain-containing protein;protein_id=WP_002439263.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	22635	22964	.	+	.	ID=gene-CP553_RS05220;Name=CP553_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05220;old_locus_tag=CP553_05405
NZ_PCFD01000011.1	Protein Homology	CDS	22635	22964	.	+	0	ID=cds-WP_002439260.1;Parent=gene-CP553_RS05220;Dbxref=GenBank:WP_002439260.1;Name=WP_002439260.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439260.1;locus_tag=CP553_RS05220;product=helix-turn-helix domain-containing protein;protein_id=WP_002439260.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	22976	23437	.	+	.	ID=gene-CP553_RS05225;Name=CP553_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05225;old_locus_tag=CP553_05410
NZ_PCFD01000011.1	Protein Homology	CDS	22976	23437	.	+	0	ID=cds-WP_002439258.1;Parent=gene-CP553_RS05225;Dbxref=GenBank:WP_002439258.1;Name=WP_002439258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469462.1;locus_tag=CP553_RS05225;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_002439258.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	23453	23971	.	+	.	ID=gene-CP553_RS05230;Name=CP553_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05230;old_locus_tag=CP553_05415
NZ_PCFD01000011.1	Protein Homology	CDS	23453	23971	.	+	0	ID=cds-WP_002439256.1;Parent=gene-CP553_RS05230;Dbxref=GenBank:WP_002439256.1;Name=WP_002439256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439256.1;locus_tag=CP553_RS05230;product=hypothetical protein;protein_id=WP_002439256.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	23973	24416	.	+	.	ID=gene-CP553_RS05235;Name=CP553_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05235;old_locus_tag=CP553_05420
NZ_PCFD01000011.1	Protein Homology	CDS	23973	24416	.	+	0	ID=cds-WP_002439254.1;Parent=gene-CP553_RS05235;Dbxref=GenBank:WP_002439254.1;Name=WP_002439254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439254.1;locus_tag=CP553_RS05235;product=hypothetical protein;protein_id=WP_002439254.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	24489	24683	.	+	.	ID=gene-CP553_RS05240;Name=CP553_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05240;old_locus_tag=CP553_05425
NZ_PCFD01000011.1	Protein Homology	CDS	24489	24683	.	+	0	ID=cds-WP_002439253.1;Parent=gene-CP553_RS05240;Dbxref=GenBank:WP_002439253.1;Name=WP_002439253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439253.1;locus_tag=CP553_RS05240;product=hypothetical protein;protein_id=WP_002439253.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	24752	25267	.	+	.	ID=gene-CP553_RS05245;Name=CP553_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05245;old_locus_tag=CP553_05430
NZ_PCFD01000011.1	Protein Homology	CDS	24752	25267	.	+	0	ID=cds-WP_002439252.1;Parent=gene-CP553_RS05245;Dbxref=GenBank:WP_002439252.1;Name=WP_002439252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487546.1;locus_tag=CP553_RS05245;product=hypothetical protein;protein_id=WP_002439252.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	25269	25604	.	+	.	ID=gene-CP553_RS05250;Name=CP553_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05250;old_locus_tag=CP553_05435
NZ_PCFD01000011.1	Protein Homology	CDS	25269	25604	.	+	0	ID=cds-WP_002439251.1;Parent=gene-CP553_RS05250;Dbxref=GenBank:WP_002439251.1;Name=WP_002439251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439251.1;locus_tag=CP553_RS05250;product=hypothetical protein;protein_id=WP_002439251.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	pseudogene	25660	26058	.	+	.	ID=gene-CP553_RS05255;Name=CP553_RS05255;end_range=26058,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS05255;old_locus_tag=CP553_05440;partial=true;pseudo=true
NZ_PCFD01000011.1	Protein Homology	CDS	25660	26058	.	+	0	ID=cds-CP553_RS05255;Parent=gene-CP553_RS05255;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=26058,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024502.6;locus_tag=CP553_RS05255;partial=true;product=phage integrase SAM-like domain-containing protein;pseudo=true;transl_table=11
NZ_PCFD01000011.1	RefSeq	pseudogene	26164	26724	.	+	.	ID=gene-CP553_RS05260;Name=CP553_RS05260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS05260;pseudo=true
NZ_PCFD01000011.1	Protein Homology	CDS	26164	26724	.	+	0	ID=cds-CP553_RS05260;Parent=gene-CP553_RS05260;Note=internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456422.1;locus_tag=CP553_RS05260;product=site-specific integrase;pseudo=true;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	26882	26970	.	-	.	ID=gene-CP553_RS05265;Name=CP553_RS05265;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS05265;old_locus_tag=CP553_05450
NZ_PCFD01000011.1	tRNAscan-SE	tRNA	26882	26970	.	-	.	ID=rna-CP553_RS05265;Parent=gene-CP553_RS05265;anticodon=(pos:complement(26933..26935));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS05265;product=tRNA-Ser
NZ_PCFD01000011.1	tRNAscan-SE	exon	26882	26970	.	-	.	ID=exon-CP553_RS05265-1;Parent=rna-CP553_RS05265;anticodon=(pos:complement(26933..26935));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS05265;product=tRNA-Ser
NZ_PCFD01000011.1	RefSeq	gene	26974	27048	.	-	.	ID=gene-CP553_RS05270;Name=CP553_RS05270;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS05270;old_locus_tag=CP553_05455
NZ_PCFD01000011.1	tRNAscan-SE	tRNA	26974	27048	.	-	.	ID=rna-CP553_RS05270;Parent=gene-CP553_RS05270;anticodon=(pos:complement(27014..27016));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS05270;product=tRNA-Asn
NZ_PCFD01000011.1	tRNAscan-SE	exon	26974	27048	.	-	.	ID=exon-CP553_RS05270-1;Parent=rna-CP553_RS05270;anticodon=(pos:complement(27014..27016));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS05270;product=tRNA-Asn
NZ_PCFD01000011.1	RefSeq	gene	27230	27805	.	-	.	ID=gene-CP553_RS05275;Name=CP553_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05275;old_locus_tag=CP553_05460
NZ_PCFD01000011.1	Protein Homology	CDS	27230	27805	.	-	0	ID=cds-WP_001829272.1;Parent=gene-CP553_RS05275;Dbxref=GenBank:WP_001829272.1;Name=WP_001829272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464423.1;locus_tag=CP553_RS05275;product=competence protein ComK;protein_id=WP_001829272.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	28020	28238	.	+	.	ID=gene-CP553_RS05280;Name=CP553_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05280;old_locus_tag=CP553_05465
NZ_PCFD01000011.1	Protein Homology	CDS	28020	28238	.	+	0	ID=cds-WP_001829292.1;Parent=gene-CP553_RS05280;Dbxref=GenBank:WP_001829292.1;Name=WP_001829292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464422.1;locus_tag=CP553_RS05280;product=IDEAL domain-containing protein;protein_id=WP_001829292.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	28316	29302	.	-	.	ID=gene-CP553_RS05285;Name=CP553_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05285;old_locus_tag=CP553_05470
NZ_PCFD01000011.1	Protein Homology	CDS	28316	29302	.	-	0	ID=cds-WP_001829269.1;Parent=gene-CP553_RS05285;Dbxref=GenBank:WP_001829269.1;Name=WP_001829269.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499516.1;locus_tag=CP553_RS05285;product=lipoate--protein ligase;protein_id=WP_001829269.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	29507	29692	.	+	.	ID=gene-CP553_RS05290;Name=CP553_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05290;old_locus_tag=CP553_05475
NZ_PCFD01000011.1	Protein Homology	CDS	29507	29692	.	+	0	ID=cds-WP_001829339.1;Parent=gene-CP553_RS05290;Dbxref=GenBank:WP_001829339.1;Name=WP_001829339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899900.1;locus_tag=CP553_RS05290;product=YkvS family protein;protein_id=WP_001829339.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	29698	30300	.	+	.	ID=gene-CP553_RS05295;Name=CP553_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05295;old_locus_tag=CP553_05480
NZ_PCFD01000011.1	Protein Homology	CDS	29698	30300	.	+	0	ID=cds-WP_001829312.1;Parent=gene-CP553_RS05295;Dbxref=GenBank:WP_001829312.1;Name=WP_001829312.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458039.1;locus_tag=CP553_RS05295;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_001829312.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	30403	31908	.	-	.	ID=gene-CP553_RS05300;Name=CP553_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05300;old_locus_tag=CP553_05485
NZ_PCFD01000011.1	Protein Homology	CDS	30403	31908	.	-	0	ID=cds-WP_001829277.1;Parent=gene-CP553_RS05300;Dbxref=GenBank:WP_001829277.1;Name=WP_001829277.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458038.1;locus_tag=CP553_RS05300;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_001829277.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	32047	33405	.	-	.	ID=gene-CP553_RS05305;Name=CP553_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05305;old_locus_tag=CP553_05490
NZ_PCFD01000011.1	Protein Homology	CDS	32047	33405	.	-	0	ID=cds-WP_002439149.1;Parent=gene-CP553_RS05305;Dbxref=GenBank:WP_002439149.1;Name=WP_002439149.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499512.1;locus_tag=CP553_RS05305;product=TrkH family potassium uptake protein;protein_id=WP_002439149.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	33423	35180	.	-	.	ID=gene-CP553_RS05310;Name=CP553_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05310;old_locus_tag=CP553_05495
NZ_PCFD01000011.1	Protein Homology	CDS	33423	35180	.	-	0	ID=cds-WP_001829335.1;Parent=gene-CP553_RS05310;Dbxref=GenBank:WP_001829335.1;Name=WP_001829335.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829335.1;locus_tag=CP553_RS05310;product=S1C family serine protease;protein_id=WP_001829335.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	35391	36197	.	-	.	ID=gene-CP553_RS05315;Name=CP553_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05315;old_locus_tag=CP553_05500
NZ_PCFD01000011.1	Protein Homology	CDS	35391	36197	.	-	0	ID=cds-WP_002439148.1;Parent=gene-CP553_RS05315;Dbxref=GenBank:WP_002439148.1;Name=WP_002439148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829314.1;locus_tag=CP553_RS05315;product=TerC family protein;protein_id=WP_002439148.1;transl_table=11
NZ_PCFD01000011.1	cmsearch	riboswitch	36269	36392	.	-	.	ID=id-NZ_PCFD01000011.1:36269..36392;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000011.1	RefSeq	gene	36506	38068	.	-	.	ID=gene-CP553_RS05320;Name=CP553_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05320;old_locus_tag=CP553_05505
NZ_PCFD01000011.1	Protein Homology	CDS	36506	38068	.	-	0	ID=cds-WP_001829318.1;Parent=gene-CP553_RS05320;Dbxref=GenBank:WP_001829318.1;Name=WP_001829318.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499509.1;locus_tag=CP553_RS05320;product=peptide chain release factor 3;protein_id=WP_001829318.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	38072	38317	.	-	.	ID=gene-CP553_RS05325;Name=CP553_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05325;old_locus_tag=CP553_05510
NZ_PCFD01000011.1	Protein Homology	CDS	38072	38317	.	-	0	ID=cds-WP_002439147.1;Parent=gene-CP553_RS05325;Dbxref=GenBank:WP_002439147.1;Name=WP_002439147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368024.1;locus_tag=CP553_RS05325;product=YueH family protein;protein_id=WP_002439147.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	38307	39791	.	-	.	ID=gene-CP553_RS05330;Name=CP553_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05330;old_locus_tag=CP553_05515
NZ_PCFD01000011.1	Protein Homology	CDS	38307	39791	.	-	0	ID=cds-WP_001829323.1;Parent=gene-CP553_RS05330;Dbxref=GenBank:WP_001829323.1;Name=WP_001829323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829323.1;locus_tag=CP553_RS05330;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_001829323.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	40313	41488	.	+	.	ID=gene-CP553_RS05335;Name=CP553_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05335;old_locus_tag=CP553_05520
NZ_PCFD01000011.1	Protein Homology	CDS	40313	41488	.	+	0	ID=cds-WP_001829298.1;Parent=gene-CP553_RS05335;Dbxref=GenBank:WP_001829298.1;Name=WP_001829298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499506.1;locus_tag=CP553_RS05335;product=diglucosyl diacylglycerol synthase;protein_id=WP_001829298.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	41466	42659	.	+	.	ID=gene-CP553_RS05340;Name=ltaA;gbkey=Gene;gene=ltaA;gene_biotype=protein_coding;locus_tag=CP553_RS05340;old_locus_tag=CP553_05525
NZ_PCFD01000011.1	Protein Homology	CDS	41466	42659	.	+	0	ID=cds-WP_002494345.1;Parent=gene-CP553_RS05340;Dbxref=GenBank:WP_002494345.1;Name=WP_002494345.1;Ontology_term=GO:0070395,GO:0140327;gbkey=CDS;gene=ltaA;go_function=flippase activity|0140327||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363656.1;locus_tag=CP553_RS05340;product=lipoteichoic acid biosynthesis MFS flippase LtaA;protein_id=WP_002494345.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	42924	43433	.	-	.	ID=gene-CP553_RS05345;Name=CP553_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05345;old_locus_tag=CP553_05530
NZ_PCFD01000011.1	Protein Homology	CDS	42924	43433	.	-	0	ID=cds-WP_002439146.1;Parent=gene-CP553_RS05345;Dbxref=GenBank:WP_002439146.1;Name=WP_002439146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494354.1;locus_tag=CP553_RS05345;product=YjcG family protein;protein_id=WP_002439146.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	43587	44342	.	-	.	ID=gene-CP553_RS05350;Name=CP553_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05350;old_locus_tag=CP553_05535
NZ_PCFD01000011.1	Protein Homology	CDS	43587	44342	.	-	0	ID=cds-WP_001832657.1;Parent=gene-CP553_RS05350;Dbxref=GenBank:WP_001832657.1;Name=WP_001832657.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829316.1;locus_tag=CP553_RS05350;product=esterase family protein;protein_id=WP_001832657.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	44567	45652	.	+	.	ID=gene-CP553_RS05355;Name=cozEa;gbkey=Gene;gene=cozEa;gene_biotype=protein_coding;locus_tag=CP553_RS05355;old_locus_tag=CP553_05540
NZ_PCFD01000011.1	Protein Homology	CDS	44567	45652	.	+	0	ID=cds-WP_002456101.1;Parent=gene-CP553_RS05355;Dbxref=GenBank:WP_002456101.1;Name=WP_002456101.1;gbkey=CDS;gene=cozEa;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499501.1;locus_tag=CP553_RS05355;product=lipoteichoic acid biosynthesis protein CozEa;protein_id=WP_002456101.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	46051	46821	.	-	.	ID=gene-CP553_RS05360;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=CP553_RS05360;old_locus_tag=CP553_05545
NZ_PCFD01000011.1	Protein Homology	CDS	46051	46821	.	-	0	ID=cds-WP_002439142.1;Parent=gene-CP553_RS05360;Dbxref=GenBank:WP_002439142.1;Name=WP_002439142.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476543.1;locus_tag=CP553_RS05360;product=enoyl-ACP reductase FabI;protein_id=WP_002439142.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	47043	47414	.	-	.	ID=gene-CP553_RS13055;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=CP553_RS13055;old_locus_tag=CP553_05550
NZ_PCFD01000011.1	Protein Homology	CDS	47043	47414	.	-	0	ID=cds-WP_002469227.1;Parent=gene-CP553_RS13055;Dbxref=GenBank:WP_002469227.1;Name=WP_002469227.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CP553_RS13055;product=IS200/IS605 family transposase;protein_id=WP_002469227.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	pseudogene	47545	47858	.	-	.	ID=gene-CP553_RS05370;Name=CP553_RS05370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS05370;partial=true;pseudo=true;start_range=.,47545
NZ_PCFD01000011.1	Protein Homology	CDS	47545	47858	.	-	0	ID=cds-CP553_RS05370;Parent=gene-CP553_RS05370;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474535.1;locus_tag=CP553_RS05370;partial=true;product=recombinase family protein;pseudo=true;start_range=.,47545;transl_table=11
NZ_PCFD01000011.1	RefSeq	pseudogene	47979	48537	.	+	.	ID=gene-CP553_RS05375;Name=CP553_RS05375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS05375;old_locus_tag=CP553_05560;partial=true;pseudo=true;start_range=.,47979
NZ_PCFD01000011.1	Protein Homology	CDS	47979	48537	.	+	0	ID=cds-CP553_RS05375;Parent=gene-CP553_RS05375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636329.1;locus_tag=CP553_RS05375;partial=true;product=zinc-binding dehydrogenase;pseudo=true;start_range=.,47979;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	48695	48796	.	-	.	ID=gene-CP553_RS12980;Name=CP553_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12980
NZ_PCFD01000011.1	Protein Homology	CDS	48695	48796	.	-	0	ID=cds-WP_002494359.1;Parent=gene-CP553_RS12980;Dbxref=GenBank:WP_002494359.1;Name=WP_002494359.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013777.6;locus_tag=CP553_RS12980;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_002494359.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	49033	51291	.	-	.	ID=gene-CP553_RS05385;Name=CP553_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05385;old_locus_tag=CP553_05570
NZ_PCFD01000011.1	Protein Homology	CDS	49033	51291	.	-	0	ID=cds-WP_002439134.1;Parent=gene-CP553_RS05385;Dbxref=GenBank:WP_002439134.1;Name=WP_002439134.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446094.1;locus_tag=CP553_RS05385;product=ATP-binding cassette domain-containing protein;protein_id=WP_002439134.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	pseudogene	51390	52823	.	-	.	ID=gene-CP553_RS12985;Name=zwf;end_range=52823,.;gbkey=Gene;gene=zwf;gene_biotype=pseudogene;locus_tag=CP553_RS12985;partial=true;pseudo=true
NZ_PCFD01000011.1	Protein Homology	CDS	51390	52823	.	-	0	ID=cds-CP553_RS12985;Parent=gene-CP553_RS12985;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;end_range=52823,.;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637937.1;locus_tag=CP553_RS12985;partial=true;product=glucose-6-phosphate dehydrogenase;pseudo=true;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	52870	53073	.	+	.	ID=gene-CP553_RS05395;Name=CP553_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05395;old_locus_tag=CP553_05600
NZ_PCFD01000011.1	GeneMarkS-2+	CDS	52870	53073	.	+	0	ID=cds-WP_001829258.1;Parent=gene-CP553_RS05395;Dbxref=GenBank:WP_001829258.1;Name=WP_001829258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS05395;product=transposase;protein_id=WP_001829258.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	53140	53235	.	-	.	ID=gene-CP553_RS05400;Name=CP553_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05400
NZ_PCFD01000011.1	Protein Homology	CDS	53140	53235	.	-	0	ID=cds-WP_107362610.1;Parent=gene-CP553_RS05400;Dbxref=GenBank:WP_107362610.1;Name=WP_107362610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889978.1;locus_tag=CP553_RS05400;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_107362610.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	53346	53642	.	-	.	ID=gene-CP553_RS05405;Name=CP553_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05405;old_locus_tag=CP553_05605
NZ_PCFD01000011.1	Protein Homology	CDS	53346	53642	.	-	0	ID=cds-WP_025987217.1;Parent=gene-CP553_RS05405;Dbxref=GenBank:WP_025987217.1;Name=WP_025987217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497226.1;locus_tag=CP553_RS05405;product=DUF4176 domain-containing protein;protein_id=WP_025987217.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	53670	54293	.	-	.	ID=gene-CP553_RS05410;Name=CP553_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05410;old_locus_tag=CP553_05610
NZ_PCFD01000011.1	Protein Homology	CDS	53670	54293	.	-	0	ID=cds-WP_002439126.1;Parent=gene-CP553_RS05410;Dbxref=GenBank:WP_002439126.1;Name=WP_002439126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829337.1;locus_tag=CP553_RS05410;product=DUF443 family protein;protein_id=WP_002439126.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	55005	56849	.	-	.	ID=gene-CP553_RS05415;Name=CP553_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05415;old_locus_tag=CP553_05620
NZ_PCFD01000011.1	Protein Homology	CDS	55005	56849	.	-	0	ID=cds-WP_001832661.1;Parent=gene-CP553_RS05415;Dbxref=GenBank:WP_001832661.1;Name=WP_001832661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499499.1;locus_tag=CP553_RS05415;product=monovalent cation:proton antiporter family protein;protein_id=WP_001832661.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	56859	58244	.	-	.	ID=gene-CP553_RS05420;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=CP553_RS05420;old_locus_tag=CP553_05625
NZ_PCFD01000011.1	Protein Homology	CDS	56859	58244	.	-	0	ID=cds-WP_001829287.1;Parent=gene-CP553_RS05420;Dbxref=GenBank:WP_001829287.1;Name=WP_001829287.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441862.1;locus_tag=CP553_RS05420;product=magnesium transporter;protein_id=WP_001829287.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	58269	59123	.	-	.	ID=gene-CP553_RS05425;Name=CP553_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05425;old_locus_tag=CP553_05630
NZ_PCFD01000011.1	Protein Homology	CDS	58269	59123	.	-	0	ID=cds-WP_001829311.1;Parent=gene-CP553_RS05425;Dbxref=GenBank:WP_001829311.1;Name=WP_001829311.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464405.1;locus_tag=CP553_RS05425;product=RluA family pseudouridine synthase;protein_id=WP_001829311.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	59120	59929	.	-	.	ID=gene-CP553_RS05430;Name=CP553_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05430;old_locus_tag=CP553_05635
NZ_PCFD01000011.1	Protein Homology	CDS	59120	59929	.	-	0	ID=cds-WP_001829306.1;Parent=gene-CP553_RS05430;Dbxref=GenBank:WP_001829306.1;Name=WP_001829306.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499496.1;locus_tag=CP553_RS05430;product=NAD kinase;protein_id=WP_001829306.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	59943	60578	.	-	.	ID=gene-CP553_RS05435;Name=CP553_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05435;old_locus_tag=CP553_05640
NZ_PCFD01000011.1	Protein Homology	CDS	59943	60578	.	-	0	ID=cds-WP_001829266.1;Parent=gene-CP553_RS05435;Dbxref=GenBank:WP_001829266.1;Name=WP_001829266.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499495.1;locus_tag=CP553_RS05435;product=GTP pyrophosphokinase;protein_id=WP_001829266.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	60595	60942	.	-	.	ID=gene-CP553_RS05440;Name=CP553_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05440;old_locus_tag=CP553_05645
NZ_PCFD01000011.1	Protein Homology	CDS	60595	60942	.	-	0	ID=cds-WP_001829330.1;Parent=gene-CP553_RS05440;Dbxref=GenBank:WP_001829330.1;Name=WP_001829330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441855.1;locus_tag=CP553_RS05440;product=hypothetical protein;protein_id=WP_001829330.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	61226	61816	.	+	.	ID=gene-CP553_RS05445;Name=CP553_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05445;old_locus_tag=CP553_05650
NZ_PCFD01000011.1	Protein Homology	CDS	61226	61816	.	+	0	ID=cds-WP_002456102.1;Parent=gene-CP553_RS05445;Dbxref=GenBank:WP_002456102.1;Name=WP_002456102.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476532.1;locus_tag=CP553_RS05445;product=CYTH domain-containing protein;protein_id=WP_002456102.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	61898	62263	.	+	.	ID=gene-CP553_RS05450;Name=CP553_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05450;old_locus_tag=CP553_05655
NZ_PCFD01000011.1	Protein Homology	CDS	61898	62263	.	+	0	ID=cds-WP_002456103.1;Parent=gene-CP553_RS05450;Dbxref=GenBank:WP_002456103.1;Name=WP_002456103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012087548.1;locus_tag=CP553_RS05450;product=truncated hemoglobin YjbI;protein_id=WP_002456103.1;transl_table=11
NZ_PCFD01000011.1	RefSeq	gene	62286	63083	.	+	.	ID=gene-CP553_RS05455;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=CP553_RS05455;old_locus_tag=CP553_05660
NZ_PCFD01000011.1	Protein Homology	CDS	62286	63083	.	+	0	ID=cds-WP_002439113.1;Parent=gene-CP553_RS05455;Dbxref=GenBank:WP_002439113.1;Name=WP_002439113.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503942.1;locus_tag=CP553_RS05455;product=protease adaptor protein YjbH;protein_id=WP_002439113.1;transl_table=11
##sequence-region NZ_PCFD01000012.1 1 58832
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000012.1	RefSeq	region	1	58832	.	+	.	ID=NZ_PCFD01000012.1:1..58832;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000012.1	RefSeq	gene	132	1004	.	-	.	ID=gene-CP553_RS05460;Name=CP553_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05460;old_locus_tag=CP553_05665
NZ_PCFD01000012.1	Protein Homology	CDS	132	1004	.	-	0	ID=cds-WP_001829486.1;Parent=gene-CP553_RS05460;Dbxref=GenBank:WP_001829486.1;Name=WP_001829486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476687.1;locus_tag=CP553_RS05460;product=hypothetical protein;protein_id=WP_001829486.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	1331	1930	.	+	.	ID=gene-CP553_RS05465;Name=CP553_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05465;old_locus_tag=CP553_05670
NZ_PCFD01000012.1	Protein Homology	CDS	1331	1930	.	+	0	ID=cds-WP_002439621.1;Parent=gene-CP553_RS05465;Dbxref=GenBank:WP_002439621.1;Name=WP_002439621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439621.1;locus_tag=CP553_RS05465;product=hypothetical protein;protein_id=WP_002439621.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	2008	3384	.	-	.	ID=gene-CP553_RS05470;Name=CP553_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05470;old_locus_tag=CP553_05675
NZ_PCFD01000012.1	Protein Homology	CDS	2008	3384	.	-	0	ID=cds-WP_002439622.1;Parent=gene-CP553_RS05470;Dbxref=GenBank:WP_002439622.1;Name=WP_002439622.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829461.1;locus_tag=CP553_RS05470;product=aspartate kinase;protein_id=WP_002439622.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	3573	4853	.	+	.	ID=gene-CP553_RS05475;Name=CP553_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05475;old_locus_tag=CP553_05680
NZ_PCFD01000012.1	Protein Homology	CDS	3573	4853	.	+	0	ID=cds-WP_002439624.1;Parent=gene-CP553_RS05475;Dbxref=GenBank:WP_002439624.1;Name=WP_002439624.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499850.1;locus_tag=CP553_RS05475;product=homoserine dehydrogenase;protein_id=WP_002439624.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	4859	5923	.	+	.	ID=gene-CP553_RS05480;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=CP553_RS05480;old_locus_tag=CP553_05685
NZ_PCFD01000012.1	Protein Homology	CDS	4859	5923	.	+	0	ID=cds-WP_001829478.1;Parent=gene-CP553_RS05480;Dbxref=GenBank:WP_001829478.1;Name=WP_001829478.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499851.1;locus_tag=CP553_RS05480;product=threonine synthase;protein_id=WP_001829478.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	5925	6845	.	+	.	ID=gene-CP553_RS05485;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=CP553_RS05485;old_locus_tag=CP553_05690
NZ_PCFD01000012.1	Protein Homology	CDS	5925	6845	.	+	0	ID=cds-WP_002439626.1;Parent=gene-CP553_RS05485;Dbxref=GenBank:WP_002439626.1;Name=WP_002439626.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457510.1;locus_tag=CP553_RS05485;product=homoserine kinase;protein_id=WP_002439626.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	6908	7714	.	+	.	ID=gene-CP553_RS05490;Name=CP553_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05490;old_locus_tag=CP553_05695
NZ_PCFD01000012.1	Protein Homology	CDS	6908	7714	.	+	0	ID=cds-WP_001829516.1;Parent=gene-CP553_RS05490;Dbxref=GenBank:WP_001829516.1;Name=WP_001829516.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829516.1;locus_tag=CP553_RS05490;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_001829516.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	8021	8335	.	-	.	ID=gene-CP553_RS05495;Name=CP553_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05495;old_locus_tag=CP553_05700
NZ_PCFD01000012.1	Protein Homology	CDS	8021	8335	.	-	0	ID=cds-WP_002439628.1;Parent=gene-CP553_RS05495;Dbxref=GenBank:WP_002439628.1;Name=WP_002439628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499854.1;locus_tag=CP553_RS05495;product=hypothetical protein;protein_id=WP_002439628.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	8641	10089	.	-	.	ID=gene-CP553_RS05500;Name=CP553_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05500;old_locus_tag=CP553_05705
NZ_PCFD01000012.1	Protein Homology	CDS	8641	10089	.	-	0	ID=cds-WP_002439630.1;Parent=gene-CP553_RS05500;Dbxref=GenBank:WP_002439630.1;Name=WP_002439630.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361629.1;locus_tag=CP553_RS05500;product=amino acid permease;protein_id=WP_002439630.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	10320	11834	.	+	.	ID=gene-CP553_RS05505;Name=CP553_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05505;old_locus_tag=CP553_05710
NZ_PCFD01000012.1	Protein Homology	CDS	10320	11834	.	+	0	ID=cds-WP_002439632.1;Parent=gene-CP553_RS05505;Dbxref=GenBank:WP_002439632.1;Name=WP_002439632.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831169.1;locus_tag=CP553_RS05505;product=catalase;protein_id=WP_002439632.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	11924	12073	.	+	.	ID=gene-CP553_RS05510;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CP553_RS05510;old_locus_tag=CP553_05715
NZ_PCFD01000012.1	Protein Homology	CDS	11924	12073	.	+	0	ID=cds-WP_001831295.1;Parent=gene-CP553_RS05510;Dbxref=GenBank:WP_001831295.1;Name=WP_001831295.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=CP553_RS05510;product=50S ribosomal protein L33;protein_id=WP_001831295.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	12239	12508	.	+	.	ID=gene-CP553_RS05515;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=CP553_RS05515;old_locus_tag=CP553_05720
NZ_PCFD01000012.1	Protein Homology	CDS	12239	12508	.	+	0	ID=cds-WP_001831302.1;Parent=gene-CP553_RS05515;Dbxref=GenBank:WP_001831302.1;Name=WP_001831302.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384394.1;locus_tag=CP553_RS05515;product=30S ribosomal protein S14;protein_id=WP_001831302.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	12662	13639	.	+	.	ID=gene-CP553_RS05520;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=CP553_RS05520;old_locus_tag=CP553_05725
NZ_PCFD01000012.1	Protein Homology	CDS	12662	13639	.	+	0	ID=cds-WP_001832645.1;Parent=gene-CP553_RS05520;Dbxref=GenBank:WP_001832645.1;Name=WP_001832645.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365036.1;locus_tag=CP553_RS05520;product=GMP reductase;protein_id=WP_001832645.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	13653	14678	.	+	.	ID=gene-CP553_RS05525;Name=CP553_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05525;old_locus_tag=CP553_05730
NZ_PCFD01000012.1	Protein Homology	CDS	13653	14678	.	+	0	ID=cds-WP_002439636.1;Parent=gene-CP553_RS05525;Dbxref=GenBank:WP_002439636.1;Name=WP_002439636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439636.1;locus_tag=CP553_RS05525;product=CAP domain-containing protein;protein_id=WP_002439636.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	14733	14867	.	+	.	ID=gene-CP553_RS12895;Name=CP553_RS12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12895;old_locus_tag=CP553_05735
NZ_PCFD01000012.1	GeneMarkS-2+	CDS	14733	14867	.	+	0	ID=cds-WP_002456209.1;Parent=gene-CP553_RS12895;Dbxref=GenBank:WP_002456209.1;Name=WP_002456209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS12895;product=hypothetical protein;protein_id=WP_002456209.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	15031	15651	.	-	.	ID=gene-CP553_RS05530;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=CP553_RS05530;old_locus_tag=CP553_05740
NZ_PCFD01000012.1	Protein Homology	CDS	15031	15651	.	-	0	ID=cds-WP_001831182.1;Parent=gene-CP553_RS05530;Dbxref=GenBank:WP_001831182.1;Name=WP_001831182.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499863.1;locus_tag=CP553_RS05530;product=transcriptional repressor LexA;protein_id=WP_001831182.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	15795	16028	.	+	.	ID=gene-CP553_RS05535;Name=sosA;gbkey=Gene;gene=sosA;gene_biotype=protein_coding;locus_tag=CP553_RS05535;old_locus_tag=CP553_05745
NZ_PCFD01000012.1	Protein Homology	CDS	15795	16028	.	+	0	ID=cds-WP_001831148.1;Parent=gene-CP553_RS05535;Dbxref=GenBank:WP_001831148.1;Name=WP_001831148.1;gbkey=CDS;gene=sosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473582.1;locus_tag=CP553_RS05535;product=DNA damage-induced cell division inhibitor SosA;protein_id=WP_001831148.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	16189	16425	.	+	.	ID=gene-CP553_RS05540;Name=CP553_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05540;old_locus_tag=CP553_05750
NZ_PCFD01000012.1	Protein Homology	CDS	16189	16425	.	+	0	ID=cds-WP_001831015.1;Parent=gene-CP553_RS05540;Dbxref=GenBank:WP_001831015.1;Name=WP_001831015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499968.1;locus_tag=CP553_RS05540;product=DUF896 domain-containing protein;protein_id=WP_001831015.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	16657	18645	.	+	.	ID=gene-CP553_RS05545;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=CP553_RS05545;old_locus_tag=CP553_05755
NZ_PCFD01000012.1	Protein Homology	CDS	16657	18645	.	+	0	ID=cds-WP_001831061.1;Parent=gene-CP553_RS05545;Dbxref=GenBank:WP_001831061.1;Name=WP_001831061.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001661967.1;locus_tag=CP553_RS05545;product=transketolase;protein_id=WP_001831061.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	18852	19079	.	+	.	ID=gene-CP553_RS05550;Name=CP553_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05550;old_locus_tag=CP553_05760
NZ_PCFD01000012.1	Protein Homology	CDS	18852	19079	.	+	0	ID=cds-WP_001831215.1;Parent=gene-CP553_RS05550;Dbxref=GenBank:WP_001831215.1;Name=WP_001831215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831215.1;locus_tag=CP553_RS05550;product=YneF family protein;protein_id=WP_001831215.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	19311	19778	.	+	.	ID=gene-CP553_RS05555;Name=CP553_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05555;old_locus_tag=CP553_05765
NZ_PCFD01000012.1	Protein Homology	CDS	19311	19778	.	+	0	ID=cds-WP_001831312.1;Parent=gene-CP553_RS05555;Dbxref=GenBank:WP_001831312.1;Name=WP_001831312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113790.1;locus_tag=CP553_RS05555;product=CcdC family protein;protein_id=WP_001831312.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	19886	21010	.	+	.	ID=gene-CP553_RS05560;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=CP553_RS05560;old_locus_tag=CP553_05770
NZ_PCFD01000012.1	Protein Homology	CDS	19886	21010	.	+	0	ID=cds-WP_001830960.1;Parent=gene-CP553_RS05560;Dbxref=GenBank:WP_001830960.1;Name=WP_001830960.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446363.1;locus_tag=CP553_RS05560;product=exonuclease subunit SbcD;protein_id=WP_001830960.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	21014	24043	.	+	.	ID=gene-CP553_RS05565;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=CP553_RS05565;old_locus_tag=CP553_05775
NZ_PCFD01000012.1	Protein Homology	CDS	21014	24043	.	+	0	ID=cds-WP_002456208.1;Parent=gene-CP553_RS05565;Dbxref=GenBank:WP_002456208.1;Name=WP_002456208.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503669.1;locus_tag=CP553_RS05565;product=exonuclease subunit SbcC;protein_id=WP_002456208.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	24161	24511	.	-	.	ID=gene-CP553_RS05570;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=CP553_RS05570;old_locus_tag=CP553_05780
NZ_PCFD01000012.1	Protein Homology	CDS	24161	24511	.	-	0	ID=cds-WP_001831237.1;Parent=gene-CP553_RS05570;Dbxref=GenBank:WP_001831237.1;Name=WP_001831237.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831237.1;locus_tag=CP553_RS05570;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_001831237.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	24723	26363	.	+	.	ID=gene-CP553_RS05575;Name=CP553_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05575;old_locus_tag=CP553_05785
NZ_PCFD01000012.1	Protein Homology	CDS	24723	26363	.	+	0	ID=cds-WP_001831122.1;Parent=gene-CP553_RS05575;Dbxref=GenBank:WP_001831122.1;Name=WP_001831122.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442731.1;locus_tag=CP553_RS05575;product=BCCT family transporter;protein_id=WP_001831122.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	26784	29489	.	+	.	ID=gene-CP553_RS05580;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=CP553_RS05580;old_locus_tag=CP553_05790
NZ_PCFD01000012.1	Protein Homology	CDS	26784	29489	.	+	0	ID=cds-WP_002456207.1;Parent=gene-CP553_RS05580;Dbxref=GenBank:WP_002456207.1;Name=WP_002456207.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499875.1;locus_tag=CP553_RS05580;product=aconitate hydratase AcnA;protein_id=WP_002456207.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	29612	30079	.	+	.	ID=gene-CP553_RS05585;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=CP553_RS05585;old_locus_tag=CP553_05795
NZ_PCFD01000012.1	Protein Homology	CDS	29612	30079	.	+	0	ID=cds-WP_001831194.1;Parent=gene-CP553_RS05585;Dbxref=GenBank:WP_001831194.1;Name=WP_001831194.1;Ontology_term=GO:0009234;gbkey=CDS;gene=menI;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499876.1;locus_tag=CP553_RS05585;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;protein_id=WP_001831194.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	30130	30426	.	-	.	ID=gene-CP553_RS05590;Name=CP553_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05590;old_locus_tag=CP553_05800
NZ_PCFD01000012.1	Protein Homology	CDS	30130	30426	.	-	0	ID=cds-WP_001831009.1;Parent=gene-CP553_RS05590;Dbxref=GenBank:WP_001831009.1;Name=WP_001831009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493656.1;locus_tag=CP553_RS05590;product=HesB/YadR/YfhF family protein;protein_id=WP_001831009.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	30670	31278	.	-	.	ID=gene-CP553_RS05595;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=CP553_RS05595;old_locus_tag=CP553_05805
NZ_PCFD01000012.1	Protein Homology	CDS	30670	31278	.	-	0	ID=cds-WP_002439653.1;Parent=gene-CP553_RS05595;Dbxref=GenBank:WP_002439653.1;Name=WP_002439653.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275846.1;locus_tag=CP553_RS05595;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_002439653.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	31488	33482	.	+	.	ID=gene-CP553_RS05600;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=CP553_RS05600;old_locus_tag=CP553_05810
NZ_PCFD01000012.1	Protein Homology	CDS	31488	33482	.	+	0	ID=cds-WP_002439654.1;Parent=gene-CP553_RS05600;Dbxref=GenBank:WP_002439654.1;Name=WP_002439654.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456533.1;locus_tag=CP553_RS05600;product=DNA topoisomerase IV subunit B;protein_id=WP_002439654.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	33479	35881	.	+	.	ID=gene-CP553_RS05605;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=CP553_RS05605;old_locus_tag=CP553_05815
NZ_PCFD01000012.1	Protein Homology	CDS	33479	35881	.	+	0	ID=cds-WP_002469383.1;Parent=gene-CP553_RS05605;Dbxref=GenBank:WP_002469383.1;Name=WP_002469383.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439655.1;locus_tag=CP553_RS05605;product=DNA topoisomerase IV subunit A;protein_id=WP_002469383.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	36093	37550	.	+	.	ID=gene-CP553_RS05610;Name=CP553_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05610;old_locus_tag=CP553_05820
NZ_PCFD01000012.1	Protein Homology	CDS	36093	37550	.	+	0	ID=cds-WP_001831046.1;Parent=gene-CP553_RS05610;Dbxref=GenBank:WP_001831046.1;Name=WP_001831046.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484777.1;locus_tag=CP553_RS05610;product=alanine/glycine:cation symporter family protein;protein_id=WP_001831046.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	37745	38593	.	+	.	ID=gene-CP553_RS05615;Name=glcT;gbkey=Gene;gene=glcT;gene_biotype=protein_coding;locus_tag=CP553_RS05615;old_locus_tag=CP553_05825
NZ_PCFD01000012.1	Protein Homology	CDS	37745	38593	.	+	0	ID=cds-WP_116842991.1;Parent=gene-CP553_RS05615;Dbxref=GenBank:WP_116842991.1;Name=WP_116842991.1;gbkey=CDS;gene=glcT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456203.1;locus_tag=CP553_RS05615;product=glucose PTS transporter transcription antiterminator GlcT;protein_id=WP_116842991.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	38739	39956	.	+	.	ID=gene-CP553_RS05620;Name=CP553_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05620;old_locus_tag=CP553_05830
NZ_PCFD01000012.1	Protein Homology	CDS	38739	39956	.	+	0	ID=cds-WP_002439656.1;Parent=gene-CP553_RS05620;Dbxref=GenBank:WP_002439656.1;Name=WP_002439656.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476707.1;locus_tag=CP553_RS05620;product=AI-2E family transporter;protein_id=WP_002439656.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	40210	42732	.	+	.	ID=gene-CP553_RS05625;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=CP553_RS05625;old_locus_tag=CP553_05835
NZ_PCFD01000012.1	Protein Homology	CDS	40210	42732	.	+	0	ID=cds-WP_001831275.1;Parent=gene-CP553_RS05625;Dbxref=GenBank:WP_001831275.1;Name=WP_001831275.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504545.1;locus_tag=CP553_RS05625;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_001831275.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	42926	43441	.	-	.	ID=gene-CP553_RS05630;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CP553_RS05630;old_locus_tag=CP553_05840
NZ_PCFD01000012.1	Protein Homology	CDS	42926	43441	.	-	0	ID=cds-WP_116842992.1;Parent=gene-CP553_RS05630;Dbxref=GenBank:WP_116842992.1;Name=WP_116842992.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497837.1;locus_tag=CP553_RS05630;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_116842992.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	43577	44566	.	+	.	ID=gene-CP553_RS05635;Name=CP553_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05635;old_locus_tag=CP553_05845
NZ_PCFD01000012.1	Protein Homology	CDS	43577	44566	.	+	0	ID=cds-WP_001831067.1;Parent=gene-CP553_RS05635;Dbxref=GenBank:WP_001831067.1;Name=WP_001831067.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831067.1;locus_tag=CP553_RS05635;product=LCP family protein;protein_id=WP_001831067.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	pseudogene	44869	45056	.	-	.	ID=gene-CP553_RS12990;Name=CP553_RS12990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12990;old_locus_tag=CP553_05850;pseudo=true
NZ_PCFD01000012.1	Protein Homology	CDS	44869	45056	.	-	0	ID=cds-CP553_RS12990;Parent=gene-CP553_RS12990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456764.1;locus_tag=CP553_RS12990;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	45111	45296	.	-	.	ID=gene-CP553_RS05640;Name=CP553_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05640;old_locus_tag=CP553_05855
NZ_PCFD01000012.1	Protein Homology	CDS	45111	45296	.	-	0	ID=cds-WP_001831035.1;Parent=gene-CP553_RS05640;Dbxref=GenBank:WP_001831035.1;Name=WP_001831035.1;Ontology_term=GO:0008152,GO:0016862;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499889.1;locus_tag=CP553_RS05640;product=2-hydroxymuconate tautomerase;protein_id=WP_001831035.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	45440	46702	.	+	.	ID=gene-CP553_RS05645;Name=CP553_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05645;old_locus_tag=CP553_05860
NZ_PCFD01000012.1	Protein Homology	CDS	45440	46702	.	+	0	ID=cds-WP_001831129.1;Parent=gene-CP553_RS05645;Dbxref=GenBank:WP_001831129.1;Name=WP_001831129.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499890.1;locus_tag=CP553_RS05645;product=Y-family DNA polymerase;protein_id=WP_001831129.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	46774	47862	.	-	.	ID=gene-CP553_RS05650;Name=CP553_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05650;old_locus_tag=CP553_05865
NZ_PCFD01000012.1	Protein Homology	CDS	46774	47862	.	-	0	ID=cds-WP_001831297.1;Parent=gene-CP553_RS05650;Dbxref=GenBank:WP_001831297.1;Name=WP_001831297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473587.1;locus_tag=CP553_RS05650;product=prephenate dehydrogenase;protein_id=WP_001831297.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	48521	49927	.	+	.	ID=gene-CP553_RS05655;Name=CP553_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05655;old_locus_tag=CP553_05870
NZ_PCFD01000012.1	Protein Homology	CDS	48521	49927	.	+	0	ID=cds-WP_002439659.1;Parent=gene-CP553_RS05655;Dbxref=GenBank:WP_002439659.1;Name=WP_002439659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503308.1;locus_tag=CP553_RS05655;product=anthranilate synthase component I;protein_id=WP_002439659.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	49924	50490	.	+	.	ID=gene-CP553_RS05660;Name=CP553_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05660;old_locus_tag=CP553_05875
NZ_PCFD01000012.1	Protein Homology	CDS	49924	50490	.	+	0	ID=cds-WP_001831157.1;Parent=gene-CP553_RS05660;Dbxref=GenBank:WP_001831157.1;Name=WP_001831157.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505749.1;locus_tag=CP553_RS05660;product=anthranilate synthase component II;protein_id=WP_001831157.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	50493	51488	.	+	.	ID=gene-CP553_RS05665;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=CP553_RS05665;old_locus_tag=CP553_05880
NZ_PCFD01000012.1	Protein Homology	CDS	50493	51488	.	+	0	ID=cds-WP_001830976.1;Parent=gene-CP553_RS05665;Dbxref=GenBank:WP_001830976.1;Name=WP_001830976.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495418.1;locus_tag=CP553_RS05665;product=anthranilate phosphoribosyltransferase;protein_id=WP_001830976.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	51492	52280	.	+	.	ID=gene-CP553_RS05670;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=CP553_RS05670;old_locus_tag=CP553_05885
NZ_PCFD01000012.1	Protein Homology	CDS	51492	52280	.	+	0	ID=cds-WP_001831115.1;Parent=gene-CP553_RS05670;Dbxref=GenBank:WP_001831115.1;Name=WP_001831115.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831115.1;locus_tag=CP553_RS05670;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_001831115.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	52270	52893	.	+	.	ID=gene-CP553_RS05675;Name=CP553_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05675;old_locus_tag=CP553_05890
NZ_PCFD01000012.1	Protein Homology	CDS	52270	52893	.	+	0	ID=cds-WP_001832767.1;Parent=gene-CP553_RS05675;Dbxref=GenBank:WP_001832767.1;Name=WP_001832767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476715.1;locus_tag=CP553_RS05675;product=phosphoribosylanthranilate isomerase;protein_id=WP_001832767.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	52897	54105	.	+	.	ID=gene-CP553_RS05680;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=CP553_RS05680;old_locus_tag=CP553_05895
NZ_PCFD01000012.1	Protein Homology	CDS	52897	54105	.	+	0	ID=cds-WP_001831324.1;Parent=gene-CP553_RS05680;Dbxref=GenBank:WP_001831324.1;Name=WP_001831324.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457484.1;locus_tag=CP553_RS05680;product=tryptophan synthase subunit beta;protein_id=WP_001831324.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	54098	54829	.	+	.	ID=gene-CP553_RS05685;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=CP553_RS05685;old_locus_tag=CP553_05900
NZ_PCFD01000012.1	Protein Homology	CDS	54098	54829	.	+	0	ID=cds-WP_032604357.1;Parent=gene-CP553_RS05685;Dbxref=GenBank:WP_032604357.1;Name=WP_032604357.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456200.1;locus_tag=CP553_RS05685;product=tryptophan synthase subunit alpha;protein_id=WP_032604357.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	55020	55679	.	+	.	ID=gene-CP553_RS05690;Name=CP553_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05690;old_locus_tag=CP553_05905
NZ_PCFD01000012.1	Protein Homology	CDS	55020	55679	.	+	0	ID=cds-WP_001830963.1;Parent=gene-CP553_RS05690;Dbxref=GenBank:WP_001830963.1;Name=WP_001830963.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830963.1;locus_tag=CP553_RS05690;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_001830963.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	55952	57205	.	+	.	ID=gene-CP553_RS05695;Name=CP553_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05695;old_locus_tag=CP553_05915
NZ_PCFD01000012.1	Protein Homology	CDS	55952	57205	.	+	0	ID=cds-WP_001830979.1;Parent=gene-CP553_RS05695;Dbxref=GenBank:WP_001830979.1;Name=WP_001830979.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495001.1;locus_tag=CP553_RS05695;product=aminoacyltransferase;protein_id=WP_001830979.1;transl_table=11
NZ_PCFD01000012.1	RefSeq	gene	57231	58484	.	+	.	ID=gene-CP553_RS05700;Name=CP553_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05700;old_locus_tag=CP553_05920
NZ_PCFD01000012.1	Protein Homology	CDS	57231	58484	.	+	0	ID=cds-WP_002439665.1;Parent=gene-CP553_RS05700;Dbxref=GenBank:WP_002439665.1;Name=WP_002439665.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=CP553_RS05700;product=aminoacyltransferase;protein_id=WP_002439665.1;transl_table=11
##sequence-region NZ_PCFD01000013.1 1 58541
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000013.1	RefSeq	region	1	58541	.	+	.	ID=NZ_PCFD01000013.1:1..58541;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000013.1	RefSeq	gene	142	1989	.	-	.	ID=gene-CP553_RS05705;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=CP553_RS05705;old_locus_tag=CP553_05925
NZ_PCFD01000013.1	Protein Homology	CDS	142	1989	.	-	0	ID=cds-WP_002439347.1;Parent=gene-CP553_RS05705;Dbxref=GenBank:WP_002439347.1;Name=WP_002439347.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499605.1;locus_tag=CP553_RS05705;product=translational GTPase TypA;protein_id=WP_002439347.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	2088	2279	.	+	.	ID=gene-CP553_RS05710;Name=CP553_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05710;old_locus_tag=CP553_05930
NZ_PCFD01000013.1	Protein Homology	CDS	2088	2279	.	+	0	ID=cds-WP_001831670.1;Parent=gene-CP553_RS05710;Dbxref=GenBank:WP_001831670.1;Name=WP_001831670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008530239.1;locus_tag=CP553_RS05710;product=DUF5325 family protein;protein_id=WP_001831670.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	2833	3654	.	-	.	ID=gene-CP553_RS05715;Name=CP553_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05715;old_locus_tag=CP553_05935
NZ_PCFD01000013.1	Protein Homology	CDS	2833	3654	.	-	0	ID=cds-WP_001831667.1;Parent=gene-CP553_RS05715;Dbxref=GenBank:WP_001831667.1;Name=WP_001831667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446183.1;locus_tag=CP553_RS05715;product=inositol monophosphatase family protein;protein_id=WP_001831667.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	3831	4442	.	+	.	ID=gene-CP553_RS05720;Name=CP553_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05720;old_locus_tag=CP553_05940
NZ_PCFD01000013.1	Protein Homology	CDS	3831	4442	.	+	0	ID=cds-WP_001831689.1;Parent=gene-CP553_RS05720;Dbxref=GenBank:WP_001831689.1;Name=WP_001831689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831689.1;locus_tag=CP553_RS05720;product=YktB family protein;protein_id=WP_001831689.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	4557	5918	.	+	.	ID=gene-CP553_RS05725;Name=CP553_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05725;old_locus_tag=CP553_05945
NZ_PCFD01000013.1	Protein Homology	CDS	4557	5918	.	+	0	ID=cds-WP_002439344.1;Parent=gene-CP553_RS05725;Dbxref=GenBank:WP_002439344.1;Name=WP_002439344.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439344.1;locus_tag=CP553_RS05725;product=Nramp family divalent metal transporter;protein_id=WP_002439344.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	6132	6668	.	-	.	ID=gene-CP553_RS05730;Name=CP553_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05730;old_locus_tag=CP553_05950
NZ_PCFD01000013.1	Protein Homology	CDS	6132	6668	.	-	0	ID=cds-WP_001831659.1;Parent=gene-CP553_RS05730;Dbxref=GenBank:WP_001831659.1;Name=WP_001831659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474561.1;locus_tag=CP553_RS05730;product=DUF4064 domain-containing protein;protein_id=WP_001831659.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	6973	8124	.	-	.	ID=gene-CP553_RS05735;Name=auxB;gbkey=Gene;gene=auxB;gene_biotype=protein_coding;locus_tag=CP553_RS05735;old_locus_tag=CP553_05955
NZ_PCFD01000013.1	Protein Homology	CDS	6973	8124	.	-	0	ID=cds-WP_002439342.1;Parent=gene-CP553_RS05735;Dbxref=GenBank:WP_002439342.1;Name=WP_002439342.1;gbkey=CDS;gene=auxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486531.1;locus_tag=CP553_RS05735;product=lipoteichoic acid stability factor AuxB;protein_id=WP_002439342.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	8193	9266	.	-	.	ID=gene-CP553_RS05740;Name=CP553_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05740;old_locus_tag=CP553_05960
NZ_PCFD01000013.1	Protein Homology	CDS	8193	9266	.	-	0	ID=cds-WP_001831707.1;Parent=gene-CP553_RS05740;Dbxref=GenBank:WP_001831707.1;Name=WP_001831707.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499598.1;locus_tag=CP553_RS05740;product=ABC transporter substrate-binding protein;protein_id=WP_001831707.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	9263	10075	.	-	.	ID=gene-CP553_RS05745;Name=CP553_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05745;old_locus_tag=CP553_05965
NZ_PCFD01000013.1	Protein Homology	CDS	9263	10075	.	-	0	ID=cds-WP_001831717.1;Parent=gene-CP553_RS05745;Dbxref=GenBank:WP_001831717.1;Name=WP_001831717.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505264.1;locus_tag=CP553_RS05745;product=ABC transporter permease;protein_id=WP_001831717.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	10081	10884	.	-	.	ID=gene-CP553_RS05750;Name=CP553_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05750;old_locus_tag=CP553_05970
NZ_PCFD01000013.1	Protein Homology	CDS	10081	10884	.	-	0	ID=cds-WP_001831695.1;Parent=gene-CP553_RS05750;Dbxref=GenBank:WP_001831695.1;Name=WP_001831695.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499596.1;locus_tag=CP553_RS05750;product=ABC transporter permease;protein_id=WP_001831695.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	10877	11971	.	-	.	ID=gene-CP553_RS05755;Name=CP553_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05755;old_locus_tag=CP553_05975
NZ_PCFD01000013.1	Protein Homology	CDS	10877	11971	.	-	0	ID=cds-WP_001831686.1;Parent=gene-CP553_RS05755;Dbxref=GenBank:WP_001831686.1;Name=WP_001831686.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499595.1;locus_tag=CP553_RS05755;product=ABC transporter ATP-binding protein;protein_id=WP_001831686.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	11983	12522	.	-	.	ID=gene-CP553_RS05760;Name=CP553_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05760;old_locus_tag=CP553_05980
NZ_PCFD01000013.1	Protein Homology	CDS	11983	12522	.	-	0	ID=cds-WP_002439334.1;Parent=gene-CP553_RS05760;Dbxref=GenBank:WP_002439334.1;Name=WP_002439334.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499594.1;locus_tag=CP553_RS05760;product=helix-turn-helix domain-containing protein;protein_id=WP_002439334.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	12661	12939	.	-	.	ID=gene-CP553_RS05765;Name=CP553_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05765;old_locus_tag=CP553_05985
NZ_PCFD01000013.1	Protein Homology	CDS	12661	12939	.	-	0	ID=cds-WP_001833064.1;Parent=gene-CP553_RS05765;Dbxref=GenBank:WP_001833064.1;Name=WP_001833064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001833064.1;locus_tag=CP553_RS05765;product=UPF0223 family protein;protein_id=WP_001833064.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	13241	14647	.	-	.	ID=gene-CP553_RS05770;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CP553_RS05770;old_locus_tag=CP553_05990
NZ_PCFD01000013.1	Protein Homology	CDS	13241	14647	.	-	0	ID=cds-WP_001831650.1;Parent=gene-CP553_RS05770;Dbxref=GenBank:WP_001831650.1;Name=WP_001831650.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383646.1;locus_tag=CP553_RS05770;product=dihydrolipoyl dehydrogenase;protein_id=WP_001831650.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	14652	15953	.	-	.	ID=gene-CP553_RS05775;Name=CP553_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05775;old_locus_tag=CP553_05995
NZ_PCFD01000013.1	Protein Homology	CDS	14652	15953	.	-	0	ID=cds-WP_001831683.1;Parent=gene-CP553_RS05775;Dbxref=GenBank:WP_001831683.1;Name=WP_001831683.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499591.1;locus_tag=CP553_RS05775;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_001831683.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	16084	17061	.	-	.	ID=gene-CP553_RS05780;Name=CP553_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05780;old_locus_tag=CP553_06000
NZ_PCFD01000013.1	Protein Homology	CDS	16084	17061	.	-	0	ID=cds-WP_001831654.1;Parent=gene-CP553_RS05780;Dbxref=GenBank:WP_001831654.1;Name=WP_001831654.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637695.1;locus_tag=CP553_RS05780;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_001831654.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	17065	18177	.	-	.	ID=gene-CP553_RS05785;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=CP553_RS05785;old_locus_tag=CP553_06005
NZ_PCFD01000013.1	Protein Homology	CDS	17065	18177	.	-	0	ID=cds-WP_001831653.1;Parent=gene-CP553_RS05785;Dbxref=GenBank:WP_001831653.1;Name=WP_001831653.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=CP553_RS05785;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_001831653.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	18348	18974	.	-	.	ID=gene-CP553_RS05790;Name=CP553_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05790;old_locus_tag=CP553_06010
NZ_PCFD01000013.1	Protein Homology	CDS	18348	18974	.	-	0	ID=cds-WP_001831725.1;Parent=gene-CP553_RS05790;Dbxref=GenBank:WP_001831725.1;Name=WP_001831725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464800.1;locus_tag=CP553_RS05790;product=YkyA family protein;protein_id=WP_001831725.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	19157	19708	.	+	.	ID=gene-CP553_RS05795;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=CP553_RS05795;old_locus_tag=CP553_06015
NZ_PCFD01000013.1	Protein Homology	CDS	19157	19708	.	+	0	ID=cds-WP_001831696.1;Parent=gene-CP553_RS05795;Dbxref=GenBank:WP_001831696.1;Name=WP_001831696.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499587.1;locus_tag=CP553_RS05795;product=peptide deformylase;protein_id=WP_001831696.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	20140	20358	.	+	.	ID=gene-CP553_RS05800;Name=CP553_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05800;old_locus_tag=CP553_06020
NZ_PCFD01000013.1	Protein Homology	CDS	20140	20358	.	+	0	ID=cds-WP_001831646.1;Parent=gene-CP553_RS05800;Dbxref=GenBank:WP_001831646.1;Name=WP_001831646.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499585.1;locus_tag=CP553_RS05800;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WP_001831646.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	20358	22040	.	+	.	ID=gene-CP553_RS05805;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=CP553_RS05805;old_locus_tag=CP553_06025
NZ_PCFD01000013.1	Protein Homology	CDS	20358	22040	.	+	0	ID=cds-WP_001831649.1;Parent=gene-CP553_RS05805;Dbxref=GenBank:WP_001831649.1;Name=WP_001831649.1;gbkey=CDS;gene=rnjA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499584.1;locus_tag=CP553_RS05805;product=ribonuclease J1;protein_id=WP_001831649.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	23022	23681	.	-	.	ID=gene-CP553_RS05810;Name=CP553_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05810;old_locus_tag=CP553_06030
NZ_PCFD01000013.1	Protein Homology	CDS	23022	23681	.	-	0	ID=cds-WP_001831652.1;Parent=gene-CP553_RS05810;Dbxref=GenBank:WP_001831652.1;Name=WP_001831652.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500455.1;locus_tag=CP553_RS05810;product=potassium channel family protein;protein_id=WP_001831652.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	23737	24753	.	-	.	ID=gene-CP553_RS05815;Name=CP553_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05815;old_locus_tag=CP553_06035
NZ_PCFD01000013.1	Protein Homology	CDS	23737	24753	.	-	0	ID=cds-WP_001831709.1;Parent=gene-CP553_RS05815;Dbxref=GenBank:WP_001831709.1;Name=WP_001831709.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442138.1;locus_tag=CP553_RS05815;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_001831709.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	24750	26105	.	-	.	ID=gene-CP553_RS05820;Name=CP553_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05820;old_locus_tag=CP553_06040
NZ_PCFD01000013.1	Protein Homology	CDS	24750	26105	.	-	0	ID=cds-WP_001833075.1;Parent=gene-CP553_RS05820;Dbxref=GenBank:WP_001833075.1;Name=WP_001833075.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474572.1;locus_tag=CP553_RS05820;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_001833075.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	26306	26542	.	+	.	ID=gene-CP553_RS05825;Name=CP553_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05825;old_locus_tag=CP553_06045
NZ_PCFD01000013.1	Protein Homology	CDS	26306	26542	.	+	0	ID=cds-WP_001831684.1;Parent=gene-CP553_RS05825;Dbxref=GenBank:WP_001831684.1;Name=WP_001831684.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831684.1;locus_tag=CP553_RS05825;product=glutaredoxin family protein;protein_id=WP_001831684.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	26817	28535	.	-	.	ID=gene-CP553_RS05830;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=CP553_RS05830;old_locus_tag=CP553_06050
NZ_PCFD01000013.1	Protein Homology	CDS	26817	28535	.	-	0	ID=cds-WP_001831740.1;Parent=gene-CP553_RS05830;Dbxref=GenBank:WP_001831740.1;Name=WP_001831740.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499578.1;locus_tag=CP553_RS05830;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001831740.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	28538	28804	.	-	.	ID=gene-CP553_RS05835;Name=CP553_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05835;old_locus_tag=CP553_06055
NZ_PCFD01000013.1	Protein Homology	CDS	28538	28804	.	-	0	ID=cds-WP_001831726.1;Parent=gene-CP553_RS05835;Dbxref=GenBank:WP_001831726.1;Name=WP_001831726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499577.1;locus_tag=CP553_RS05835;product=phosphocarrier protein HPr;protein_id=WP_001831726.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	28960	29499	.	-	.	ID=gene-CP553_RS05840;Name=CP553_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05840;old_locus_tag=CP553_06060
NZ_PCFD01000013.1	Protein Homology	CDS	28960	29499	.	-	0	ID=cds-WP_001831644.1;Parent=gene-CP553_RS05840;Dbxref=GenBank:WP_001831644.1;Name=WP_001831644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500762.1;locus_tag=CP553_RS05840;product=hypothetical protein;protein_id=WP_001831644.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	29559	30731	.	-	.	ID=gene-CP553_RS05845;Name=CP553_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05845;old_locus_tag=CP553_06065
NZ_PCFD01000013.1	Protein Homology	CDS	29559	30731	.	-	0	ID=cds-WP_001831690.1;Parent=gene-CP553_RS05845;Dbxref=GenBank:WP_001831690.1;Name=WP_001831690.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499575.1;locus_tag=CP553_RS05845;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_001831690.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	31037	32329	.	-	.	ID=gene-CP553_RS05850;Name=auxA;gbkey=Gene;gene=auxA;gene_biotype=protein_coding;locus_tag=CP553_RS05850;old_locus_tag=CP553_06070
NZ_PCFD01000013.1	Protein Homology	CDS	31037	32329	.	-	0	ID=cds-WP_116842993.1;Parent=gene-CP553_RS05850;Dbxref=GenBank:WP_116842993.1;Name=WP_116842993.1;gbkey=CDS;gene=auxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363602.1;locus_tag=CP553_RS05850;product=lipoteichoic acid stability factor AuxA;protein_id=WP_116842993.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	32481	32615	.	+	.	ID=gene-CP553_RS05855;Name=graF;gbkey=Gene;gene=graF;gene_biotype=protein_coding;locus_tag=CP553_RS05855;old_locus_tag=CP553_06075
NZ_PCFD01000013.1	Protein Homology	CDS	32481	32615	.	+	0	ID=cds-WP_001831711.1;Parent=gene-CP553_RS05855;Dbxref=GenBank:WP_001831711.1;Name=WP_001831711.1;gbkey=CDS;gene=graF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464804.1;locus_tag=CP553_RS05855;product=glycopeptide resistance-associated protein GraF;protein_id=WP_001831711.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	33027	34802	.	-	.	ID=gene-CP553_RS05860;Name=CP553_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05860;old_locus_tag=CP553_06080
NZ_PCFD01000013.1	Protein Homology	CDS	33027	34802	.	-	0	ID=cds-WP_001831657.1;Parent=gene-CP553_RS05860;Dbxref=GenBank:WP_001831657.1;Name=WP_001831657.1;Ontology_term=GO:0006631,GO:0050151,GO:0071949;gbkey=CDS;go_function=oleate hydratase activity|0050151||IEA,FAD binding|0071949||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498665.1;locus_tag=CP553_RS05860;product=oleate hydratase;protein_id=WP_001831657.1;transl_table=11
NZ_PCFD01000013.1	cmsearch	riboswitch	35138	35240	.	+	.	ID=id-NZ_PCFD01000013.1:35138..35240;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000013.1	RefSeq	gene	35325	35900	.	+	.	ID=gene-CP553_RS05865;Name=CP553_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05865;old_locus_tag=CP553_06085
NZ_PCFD01000013.1	Protein Homology	CDS	35325	35900	.	+	0	ID=cds-WP_001831663.1;Parent=gene-CP553_RS05865;Dbxref=GenBank:WP_001831663.1;Name=WP_001831663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499571.1;locus_tag=CP553_RS05865;product=ECF transporter S component;protein_id=WP_001831663.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	35914	37317	.	+	.	ID=gene-CP553_RS05870;Name=CP553_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05870;old_locus_tag=CP553_06090
NZ_PCFD01000013.1	Protein Homology	CDS	35914	37317	.	+	0	ID=cds-WP_001831678.1;Parent=gene-CP553_RS05870;Dbxref=GenBank:WP_001831678.1;Name=WP_001831678.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831678.1;locus_tag=CP553_RS05870;product=ABC transporter ATP-binding protein;protein_id=WP_001831678.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	37310	38116	.	+	.	ID=gene-CP553_RS05875;Name=CP553_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05875;old_locus_tag=CP553_06095
NZ_PCFD01000013.1	Protein Homology	CDS	37310	38116	.	+	0	ID=cds-WP_001831682.1;Parent=gene-CP553_RS05875;Dbxref=GenBank:WP_001831682.1;Name=WP_001831682.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464807.1;locus_tag=CP553_RS05875;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_001831682.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	38249	39490	.	-	.	ID=gene-CP553_RS05880;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=CP553_RS05880;old_locus_tag=CP553_06100
NZ_PCFD01000013.1	Protein Homology	CDS	38249	39490	.	-	0	ID=cds-WP_001831701.1;Parent=gene-CP553_RS05880;Dbxref=GenBank:WP_001831701.1;Name=WP_001831701.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831701.1;locus_tag=CP553_RS05880;product=phosphoribosylamine--glycine ligase;protein_id=WP_001831701.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	39516	40994	.	-	.	ID=gene-CP553_RS05885;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=CP553_RS05885;old_locus_tag=CP553_06105
NZ_PCFD01000013.1	Protein Homology	CDS	39516	40994	.	-	0	ID=cds-WP_001831692.1;Parent=gene-CP553_RS05885;Dbxref=GenBank:WP_001831692.1;Name=WP_001831692.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499567.1;locus_tag=CP553_RS05885;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_001831692.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	41011	41577	.	-	.	ID=gene-CP553_RS05890;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=CP553_RS05890;old_locus_tag=CP553_06110
NZ_PCFD01000013.1	Protein Homology	CDS	41011	41577	.	-	0	ID=cds-WP_001831672.1;Parent=gene-CP553_RS05890;Dbxref=GenBank:WP_001831672.1;Name=WP_001831672.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831672.1;locus_tag=CP553_RS05890;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001831672.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	41577	42608	.	-	.	ID=gene-CP553_RS05895;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=CP553_RS05895;old_locus_tag=CP553_06115
NZ_PCFD01000013.1	Protein Homology	CDS	41577	42608	.	-	0	ID=cds-WP_001831685.1;Parent=gene-CP553_RS05895;Dbxref=GenBank:WP_001831685.1;Name=WP_001831685.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831685.1;locus_tag=CP553_RS05895;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001831685.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	42601	44085	.	-	.	ID=gene-CP553_RS05900;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=CP553_RS05900;old_locus_tag=CP553_06120
NZ_PCFD01000013.1	Protein Homology	CDS	42601	44085	.	-	0	ID=cds-WP_001831721.1;Parent=gene-CP553_RS05900;Dbxref=GenBank:WP_001831721.1;Name=WP_001831721.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499564.1;locus_tag=CP553_RS05900;product=amidophosphoribosyltransferase;protein_id=WP_001831721.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	44064	46253	.	-	.	ID=gene-CP553_RS05905;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=CP553_RS05905;old_locus_tag=CP553_06125
NZ_PCFD01000013.1	Protein Homology	CDS	44064	46253	.	-	0	ID=cds-WP_001831715.1;Parent=gene-CP553_RS05905;Dbxref=GenBank:WP_001831715.1;Name=WP_001831715.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499563.1;locus_tag=CP553_RS05905;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_001831715.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	46246	46917	.	-	.	ID=gene-CP553_RS05910;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=CP553_RS05910;old_locus_tag=CP553_06130
NZ_PCFD01000013.1	Protein Homology	CDS	46246	46917	.	-	0	ID=cds-WP_001831727.1;Parent=gene-CP553_RS05910;Dbxref=GenBank:WP_001831727.1;Name=WP_001831727.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499562.1;locus_tag=CP553_RS05910;product=phosphoribosylformylglycinamidine synthase I;protein_id=WP_001831727.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	46919	47179	.	-	.	ID=gene-CP553_RS05915;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=CP553_RS05915;old_locus_tag=CP553_06135
NZ_PCFD01000013.1	Protein Homology	CDS	46919	47179	.	-	0	ID=cds-WP_001831728.1;Parent=gene-CP553_RS05915;Dbxref=GenBank:WP_001831728.1;Name=WP_001831728.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499561.1;locus_tag=CP553_RS05915;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_001831728.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	47179	47883	.	-	.	ID=gene-CP553_RS05920;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=CP553_RS05920;old_locus_tag=CP553_06140
NZ_PCFD01000013.1	Protein Homology	CDS	47179	47883	.	-	0	ID=cds-WP_001831723.1;Parent=gene-CP553_RS05920;Dbxref=GenBank:WP_001831723.1;Name=WP_001831723.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499560.1;locus_tag=CP553_RS05920;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001831723.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	47884	49011	.	-	.	ID=gene-CP553_RS05925;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=CP553_RS05925;old_locus_tag=CP553_06145
NZ_PCFD01000013.1	Protein Homology	CDS	47884	49011	.	-	0	ID=cds-WP_001831674.1;Parent=gene-CP553_RS05925;Dbxref=GenBank:WP_001831674.1;Name=WP_001831674.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504936.1;locus_tag=CP553_RS05925;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_001831674.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	48998	49480	.	-	.	ID=gene-CP553_RS05930;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=CP553_RS05930;old_locus_tag=CP553_06150
NZ_PCFD01000013.1	Protein Homology	CDS	48998	49480	.	-	0	ID=cds-WP_001831735.1;Parent=gene-CP553_RS05930;Dbxref=GenBank:WP_001831735.1;Name=WP_001831735.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465404.1;locus_tag=CP553_RS05930;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_001831735.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	49685	50545	.	+	.	ID=gene-CP553_RS05935;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=CP553_RS05935;old_locus_tag=CP553_06155
NZ_PCFD01000013.1	Protein Homology	CDS	49685	50545	.	+	0	ID=cds-WP_001831669.1;Parent=gene-CP553_RS05935;Dbxref=GenBank:WP_001831669.1;Name=WP_001831669.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486054.1;locus_tag=CP553_RS05935;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_001831669.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	50918	51235	.	+	.	ID=gene-CP553_RS05940;Name=CP553_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05940;old_locus_tag=CP553_06160
NZ_PCFD01000013.1	Protein Homology	CDS	50918	51235	.	+	0	ID=cds-WP_001831741.1;Parent=gene-CP553_RS05940;Dbxref=GenBank:WP_001831741.1;Name=WP_001831741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499556.1;locus_tag=CP553_RS05940;product=DUF5011 domain-containing protein;protein_id=WP_001831741.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	51774	52898	.	+	.	ID=gene-CP553_RS05945;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=CP553_RS05945;old_locus_tag=CP553_06165
NZ_PCFD01000013.1	Protein Homology	CDS	51774	52898	.	+	0	ID=cds-WP_001831736.1;Parent=gene-CP553_RS05945;Dbxref=GenBank:WP_001831736.1;Name=WP_001831736.1;Ontology_term=GO:0015990,GO:0009055,GO:0009486,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxA;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,cytochrome bo3 ubiquinol oxidase activity|0009486||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499554.1;locus_tag=CP553_RS05945;product=cytochrome aa3 quinol oxidase subunit II;protein_id=WP_001831736.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	52898	54886	.	+	.	ID=gene-CP553_RS05950;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=CP553_RS05950;old_locus_tag=CP553_06170
NZ_PCFD01000013.1	Protein Homology	CDS	52898	54886	.	+	0	ID=cds-WP_001831713.1;Parent=gene-CP553_RS05950;Dbxref=GenBank:WP_001831713.1;Name=WP_001831713.1;Ontology_term=GO:0015990,GO:0004129,GO:0005507,GO:0020037,GO:0016020;gbkey=CDS;gene=qoxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,copper ion binding|0005507||IEA,heme binding|0020037||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010769.1;locus_tag=CP553_RS05950;product=cytochrome aa3 quinol oxidase subunit I;protein_id=WP_001831713.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	54876	55481	.	+	.	ID=gene-CP553_RS05955;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=CP553_RS05955;old_locus_tag=CP553_06175
NZ_PCFD01000013.1	Protein Homology	CDS	54876	55481	.	+	0	ID=cds-WP_001831738.1;Parent=gene-CP553_RS05955;Dbxref=GenBank:WP_001831738.1;Name=WP_001831738.1;Ontology_term=GO:0015990,GO:0042773,GO:0009055,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=CP553_RS05955;product=cytochrome aa3 quinol oxidase subunit III;protein_id=WP_001831738.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	55478	55768	.	+	.	ID=gene-CP553_RS05960;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=CP553_RS05960;old_locus_tag=CP553_06180
NZ_PCFD01000013.1	Protein Homology	CDS	55478	55768	.	+	0	ID=cds-WP_001831700.1;Parent=gene-CP553_RS05960;Dbxref=GenBank:WP_001831700.1;Name=WP_001831700.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxD;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474577.1;locus_tag=CP553_RS05960;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=WP_001831700.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	55955	56863	.	+	.	ID=gene-CP553_RS05965;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=CP553_RS05965;old_locus_tag=CP553_06185
NZ_PCFD01000013.1	Protein Homology	CDS	55955	56863	.	+	0	ID=cds-WP_001831704.1;Parent=gene-CP553_RS05965;Dbxref=GenBank:WP_001831704.1;Name=WP_001831704.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464812.1;locus_tag=CP553_RS05965;product=ribonucleoside hydrolase RihC;protein_id=WP_001831704.1;transl_table=11
NZ_PCFD01000013.1	RefSeq	gene	57020	58222	.	-	.	ID=gene-CP553_RS05970;Name=CP553_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05970;old_locus_tag=CP553_06190
NZ_PCFD01000013.1	Protein Homology	CDS	57020	58222	.	-	0	ID=cds-WP_002439305.1;Parent=gene-CP553_RS05970;Dbxref=GenBank:WP_002439305.1;Name=WP_002439305.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001833073.1;locus_tag=CP553_RS05970;product=serine hydrolase domain-containing protein;protein_id=WP_002439305.1;transl_table=11
##sequence-region NZ_PCFD01000014.1 1 57328
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000014.1	RefSeq	region	1	57328	.	+	.	ID=NZ_PCFD01000014.1:1..57328;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000014.1	RefSeq	gene	245	757	.	-	.	ID=gene-CP553_RS05975;Name=CP553_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05975;old_locus_tag=CP553_06195
NZ_PCFD01000014.1	Protein Homology	CDS	245	757	.	-	0	ID=cds-WP_001831493.1;Parent=gene-CP553_RS05975;Dbxref=GenBank:WP_001831493.1;Name=WP_001831493.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457260.1;locus_tag=CP553_RS05975;product=SRPBCC family protein;protein_id=WP_001831493.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	1054	2355	.	-	.	ID=gene-CP553_RS05980;Name=CP553_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05980;old_locus_tag=CP553_06200
NZ_PCFD01000014.1	Protein Homology	CDS	1054	2355	.	-	0	ID=cds-WP_001831611.1;Parent=gene-CP553_RS05980;Dbxref=GenBank:WP_001831611.1;Name=WP_001831611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464756.1;locus_tag=CP553_RS05980;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_001831611.1;transl_table=11
NZ_PCFD01000014.1	cmsearch	riboswitch	2489	2585	.	-	.	ID=id-NZ_PCFD01000014.1:2489..2585;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000014.1	RefSeq	gene	2661	3248	.	-	.	ID=gene-CP553_RS05985;Name=CP553_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05985;old_locus_tag=CP553_06205
NZ_PCFD01000014.1	Protein Homology	CDS	2661	3248	.	-	0	ID=cds-WP_002438426.1;Parent=gene-CP553_RS05985;Dbxref=GenBank:WP_002438426.1;Name=WP_002438426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438426.1;locus_tag=CP553_RS05985;product=hypothetical protein;protein_id=WP_002438426.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	3292	3903	.	-	.	ID=gene-CP553_RS05990;Name=CP553_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05990;old_locus_tag=CP553_06210
NZ_PCFD01000014.1	Protein Homology	CDS	3292	3903	.	-	0	ID=cds-WP_002438424.1;Parent=gene-CP553_RS05990;Dbxref=GenBank:WP_002438424.1;Name=WP_002438424.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831602.1;locus_tag=CP553_RS05990;product=flavin reductase family protein;protein_id=WP_002438424.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	4190	5071	.	-	.	ID=gene-CP553_RS05995;Name=CP553_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS05995;old_locus_tag=CP553_06215
NZ_PCFD01000014.1	Protein Homology	CDS	4190	5071	.	-	0	ID=cds-WP_002438422.1;Parent=gene-CP553_RS05995;Dbxref=GenBank:WP_002438422.1;Name=WP_002438422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501065.1;locus_tag=CP553_RS05995;product=SDR family oxidoreductase;protein_id=WP_002438422.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	5168	6286	.	-	.	ID=gene-CP553_RS06000;Name=CP553_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06000;old_locus_tag=CP553_06220
NZ_PCFD01000014.1	Protein Homology	CDS	5168	6286	.	-	0	ID=cds-WP_002438421.1;Parent=gene-CP553_RS06000;Dbxref=GenBank:WP_002438421.1;Name=WP_002438421.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496247.1;locus_tag=CP553_RS06000;product=amidohydrolase;protein_id=WP_002438421.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	6756	7691	.	-	.	ID=gene-CP553_RS06005;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=CP553_RS06005;old_locus_tag=CP553_06225
NZ_PCFD01000014.1	Protein Homology	CDS	6756	7691	.	-	0	ID=cds-WP_001831441.1;Parent=gene-CP553_RS06005;Dbxref=GenBank:WP_001831441.1;Name=WP_001831441.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499311.1;locus_tag=CP553_RS06005;product=formimidoylglutamase;protein_id=WP_001831441.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	7939	9087	.	+	.	ID=gene-CP553_RS06010;Name=CP553_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06010;old_locus_tag=CP553_06230
NZ_PCFD01000014.1	Protein Homology	CDS	7939	9087	.	+	0	ID=cds-WP_001831571.1;Parent=gene-CP553_RS06010;Dbxref=GenBank:WP_001831571.1;Name=WP_001831571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503715.1;locus_tag=CP553_RS06010;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001831571.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	9492	9671	.	-	.	ID=gene-CP553_RS06015;Name=CP553_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06015
NZ_PCFD01000014.1	Protein Homology	CDS	9492	9671	.	-	0	ID=cds-WP_001831484.1;Parent=gene-CP553_RS06015;Dbxref=GenBank:WP_001831484.1;Name=WP_001831484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500874.1;locus_tag=CP553_RS06015;product=hypothetical protein;protein_id=WP_001831484.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	9649	9834	.	+	.	ID=gene-CP553_RS12995;Name=CP553_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12995;old_locus_tag=CP553_06235
NZ_PCFD01000014.1	Protein Homology	CDS	9649	9834	.	+	0	ID=cds-WP_002438420.1;Parent=gene-CP553_RS12995;Dbxref=GenBank:WP_002438420.1;Name=WP_002438420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438420.1;locus_tag=CP553_RS12995;product=hypothetical protein;protein_id=WP_002438420.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	10073	10765	.	-	.	ID=gene-CP553_RS06020;Name=CP553_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06020;old_locus_tag=CP553_06240
NZ_PCFD01000014.1	Protein Homology	CDS	10073	10765	.	-	0	ID=cds-WP_001831586.1;Parent=gene-CP553_RS06020;Dbxref=GenBank:WP_001831586.1;Name=WP_001831586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474434.1;locus_tag=CP553_RS06020;product=ribose 5-phosphate isomerase A;protein_id=WP_001831586.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	10931	11611	.	+	.	ID=gene-CP553_RS06025;Name=CP553_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06025;old_locus_tag=CP553_06245
NZ_PCFD01000014.1	Protein Homology	CDS	10931	11611	.	+	0	ID=cds-WP_001831436.1;Parent=gene-CP553_RS06025;Dbxref=GenBank:WP_001831436.1;Name=WP_001831436.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831436.1;locus_tag=CP553_RS06025;product=MOSC domain-containing protein;protein_id=WP_001831436.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	11684	12694	.	-	.	ID=gene-CP553_RS06030;Name=CP553_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06030;old_locus_tag=CP553_06250
NZ_PCFD01000014.1	Protein Homology	CDS	11684	12694	.	-	0	ID=cds-WP_001831562.1;Parent=gene-CP553_RS06030;Dbxref=GenBank:WP_001831562.1;Name=WP_001831562.1;Ontology_term=GO:0005975,GO:0016857,GO:0030246;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498847.1;locus_tag=CP553_RS06030;product=aldose epimerase family protein;protein_id=WP_001831562.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	13282	14892	.	+	.	ID=gene-CP553_RS06035;Name=CP553_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06035;old_locus_tag=CP553_06255
NZ_PCFD01000014.1	Protein Homology	CDS	13282	14892	.	+	0	ID=cds-WP_002438418.1;Parent=gene-CP553_RS06035;Dbxref=GenBank:WP_002438418.1;Name=WP_002438418.1;Ontology_term=GO:0019569,GO:0005524,GO:0008741;gbkey=CDS;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=L-arabinose catabolic process to D-xylulose 5-phosphate|0019569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489308.1;locus_tag=CP553_RS06035;product=ribulokinase;protein_id=WP_002438418.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	15465	15938	.	-	.	ID=gene-CP553_RS12780;Name=CP553_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12780;old_locus_tag=CP553_06270
NZ_PCFD01000014.1	Protein Homology	CDS	15465	15938	.	-	0	ID=cds-WP_002456071.1;Parent=gene-CP553_RS12780;Dbxref=GenBank:WP_002456071.1;Name=WP_002456071.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017470.6;locus_tag=CP553_RS12780;product=DUF805 domain-containing protein;protein_id=WP_002456071.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	pseudogene	15948	16037	.	-	.	ID=gene-CP553_RS13070;Name=CP553_RS13070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS13070;old_locus_tag=CP553_06275;partial=true;pseudo=true;start_range=.,15948
NZ_PCFD01000014.1	Protein Homology	CDS	15948	16037	.	-	0	ID=cds-CP553_RS13070;Parent=gene-CP553_RS13070;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501081.1;locus_tag=CP553_RS13070;partial=true;product=DUF805 domain-containing protein;pseudo=true;start_range=.,15948;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	16243	16851	.	+	.	ID=gene-CP553_RS06045;Name=CP553_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06045;old_locus_tag=CP553_06280
NZ_PCFD01000014.1	Protein Homology	CDS	16243	16851	.	+	0	ID=cds-WP_001831508.1;Parent=gene-CP553_RS06045;Dbxref=GenBank:WP_001831508.1;Name=WP_001831508.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501082.1;locus_tag=CP553_RS06045;product=DNA-3-methyladenine glycosylase;protein_id=WP_001831508.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	17007	17810	.	-	.	ID=gene-CP553_RS06050;Name=CP553_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06050;old_locus_tag=CP553_06285
NZ_PCFD01000014.1	Protein Homology	CDS	17007	17810	.	-	0	ID=cds-WP_002438408.1;Parent=gene-CP553_RS06050;Dbxref=GenBank:WP_002438408.1;Name=WP_002438408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438408.1;locus_tag=CP553_RS06050;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_002438408.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	17807	18367	.	-	.	ID=gene-CP553_RS06055;Name=CP553_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06055;old_locus_tag=CP553_06290
NZ_PCFD01000014.1	Protein Homology	CDS	17807	18367	.	-	0	ID=cds-WP_001831458.1;Parent=gene-CP553_RS06055;Dbxref=GenBank:WP_001831458.1;Name=WP_001831458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474436.1;locus_tag=CP553_RS06055;product=DUF1700 domain-containing protein;protein_id=WP_001831458.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	18364	18684	.	-	.	ID=gene-CP553_RS06060;Name=CP553_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06060;old_locus_tag=CP553_06295
NZ_PCFD01000014.1	Protein Homology	CDS	18364	18684	.	-	0	ID=cds-WP_001831459.1;Parent=gene-CP553_RS06060;Dbxref=GenBank:WP_001831459.1;Name=WP_001831459.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831459.1;locus_tag=CP553_RS06060;product=PadR family transcriptional regulator;protein_id=WP_001831459.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	19001	20209	.	+	.	ID=gene-CP553_RS06065;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=CP553_RS06065;old_locus_tag=CP553_06300
NZ_PCFD01000014.1	Protein Homology	CDS	19001	20209	.	+	0	ID=cds-WP_001831403.1;Parent=gene-CP553_RS06065;Dbxref=GenBank:WP_001831403.1;Name=WP_001831403.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501083.1;locus_tag=CP553_RS06065;product=sodium/glutamate symporter;protein_id=WP_001831403.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	20364	21413	.	-	.	ID=gene-CP553_RS06070;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=CP553_RS06070;old_locus_tag=CP553_06305
NZ_PCFD01000014.1	Protein Homology	CDS	20364	21413	.	-	0	ID=cds-WP_001831537.1;Parent=gene-CP553_RS06070;Dbxref=GenBank:WP_001831537.1;Name=WP_001831537.1;Ontology_term=GO:0008299,GO:0004452,GO:0010181;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA,FMN binding|0010181||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500866.1;locus_tag=CP553_RS06070;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_001831537.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	21453	22400	.	-	.	ID=gene-CP553_RS06075;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=CP553_RS06075;old_locus_tag=CP553_06310
NZ_PCFD01000014.1	Protein Homology	CDS	21453	22400	.	-	0	ID=cds-WP_002438400.1;Parent=gene-CP553_RS06075;Dbxref=GenBank:WP_002438400.1;Name=WP_002438400.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447236.1;locus_tag=CP553_RS06075;product=magnesium/cobalt transporter CorA;protein_id=WP_002438400.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	22507	22983	.	+	.	ID=gene-CP553_RS06080;Name=CP553_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06080;old_locus_tag=CP553_06315
NZ_PCFD01000014.1	Protein Homology	CDS	22507	22983	.	+	0	ID=cds-WP_002438397.1;Parent=gene-CP553_RS06080;Dbxref=GenBank:WP_002438397.1;Name=WP_002438397.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831539.1;locus_tag=CP553_RS06080;product=thioesterase family protein;protein_id=WP_002438397.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	22986	23375	.	+	.	ID=gene-CP553_RS06085;Name=CP553_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06085;old_locus_tag=CP553_06320
NZ_PCFD01000014.1	Protein Homology	CDS	22986	23375	.	+	0	ID=cds-WP_002438395.1;Parent=gene-CP553_RS06085;Dbxref=GenBank:WP_002438395.1;Name=WP_002438395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831478.1;locus_tag=CP553_RS06085;product=hypothetical protein;protein_id=WP_002438395.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	23511	24410	.	-	.	ID=gene-CP553_RS06090;Name=CP553_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06090;old_locus_tag=CP553_06325
NZ_PCFD01000014.1	Protein Homology	CDS	23511	24410	.	-	0	ID=cds-WP_002438393.1;Parent=gene-CP553_RS06090;Dbxref=GenBank:WP_002438393.1;Name=WP_002438393.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500862.1;locus_tag=CP553_RS06090;product=alpha/beta hydrolase;protein_id=WP_002438393.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	24628	25260	.	+	.	ID=gene-CP553_RS06095;Name=CP553_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06095;old_locus_tag=CP553_06330
NZ_PCFD01000014.1	Protein Homology	CDS	24628	25260	.	+	0	ID=cds-WP_001831566.1;Parent=gene-CP553_RS06095;Dbxref=GenBank:WP_001831566.1;Name=WP_001831566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502556.1;locus_tag=CP553_RS06095;product=hypothetical protein;protein_id=WP_001831566.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	25441	27417	.	-	.	ID=gene-CP553_RS06100;Name=CP553_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06100;old_locus_tag=CP553_06340
NZ_PCFD01000014.1	Protein Homology	CDS	25441	27417	.	-	0	ID=cds-WP_002438388.1;Parent=gene-CP553_RS06100;Dbxref=GenBank:WP_002438388.1;Name=WP_002438388.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496257.1;locus_tag=CP553_RS06100;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_002438388.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	27430	28077	.	-	.	ID=gene-CP553_RS06105;Name=CP553_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06105;old_locus_tag=CP553_06345
NZ_PCFD01000014.1	Protein Homology	CDS	27430	28077	.	-	0	ID=cds-WP_001831502.1;Parent=gene-CP553_RS06105;Dbxref=GenBank:WP_001831502.1;Name=WP_001831502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501091.1;locus_tag=CP553_RS06105;product=HlyD family secretion protein;protein_id=WP_001831502.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	28218	28769	.	+	.	ID=gene-CP553_RS06110;Name=CP553_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06110;old_locus_tag=CP553_06350
NZ_PCFD01000014.1	Protein Homology	CDS	28218	28769	.	+	0	ID=cds-WP_002438383.1;Parent=gene-CP553_RS06110;Dbxref=GenBank:WP_002438383.1;Name=WP_002438383.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474477.1;locus_tag=CP553_RS06110;product=TetR/AcrR family transcriptional regulator;protein_id=WP_002438383.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	28806	30017	.	-	.	ID=gene-CP553_RS06115;Name=CP553_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06115;old_locus_tag=CP553_06355
NZ_PCFD01000014.1	Protein Homology	CDS	28806	30017	.	-	0	ID=cds-WP_001831540.1;Parent=gene-CP553_RS06115;Dbxref=GenBank:WP_001831540.1;Name=WP_001831540.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464738.1;locus_tag=CP553_RS06115;product=multidrug effflux MFS transporter;protein_id=WP_001831540.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	30075	31463	.	-	.	ID=gene-CP553_RS06120;Name=CP553_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06120;old_locus_tag=CP553_06360
NZ_PCFD01000014.1	Protein Homology	CDS	30075	31463	.	-	0	ID=cds-WP_002470820.1;Parent=gene-CP553_RS06120;Dbxref=GenBank:WP_002470820.1;Name=WP_002470820.1;Ontology_term=GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487032.1;locus_tag=CP553_RS06120;product=zinc ribbon domain-containing protein;protein_id=WP_002470820.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	31743	32198	.	-	.	ID=gene-CP553_RS06125;Name=CP553_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06125;old_locus_tag=CP553_06365
NZ_PCFD01000014.1	Protein Homology	CDS	31743	32198	.	-	0	ID=cds-WP_001832914.1;Parent=gene-CP553_RS06125;Dbxref=GenBank:WP_001832914.1;Name=WP_001832914.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477104.1;locus_tag=CP553_RS06125;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001832914.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	32386	33342	.	+	.	ID=gene-CP553_RS06130;Name=CP553_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06130;old_locus_tag=CP553_06370
NZ_PCFD01000014.1	Protein Homology	CDS	32386	33342	.	+	0	ID=cds-WP_002438374.1;Parent=gene-CP553_RS06130;Dbxref=GenBank:WP_002438374.1;Name=WP_002438374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438374.1;locus_tag=CP553_RS06130;product=YdcF family protein;protein_id=WP_002438374.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	33623	34291	.	-	.	ID=gene-CP553_RS06135;Name=CP553_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06135;old_locus_tag=CP553_06375
NZ_PCFD01000014.1	Protein Homology	CDS	33623	34291	.	-	0	ID=cds-WP_001831526.1;Parent=gene-CP553_RS06135;Dbxref=GenBank:WP_001831526.1;Name=WP_001831526.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447225.1;locus_tag=CP553_RS06135;product=ABC transporter ATP-binding protein;protein_id=WP_001831526.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	34291	35343	.	-	.	ID=gene-CP553_RS06140;Name=CP553_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06140;old_locus_tag=CP553_06380
NZ_PCFD01000014.1	Protein Homology	CDS	34291	35343	.	-	0	ID=cds-WP_001831464.1;Parent=gene-CP553_RS06140;Dbxref=GenBank:WP_001831464.1;Name=WP_001831464.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496259.1;locus_tag=CP553_RS06140;product=ABC transporter permease;protein_id=WP_001831464.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	35475	36149	.	+	.	ID=gene-CP553_RS06145;Name=CP553_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06145;old_locus_tag=CP553_06385
NZ_PCFD01000014.1	Protein Homology	CDS	35475	36149	.	+	0	ID=cds-WP_001831555.1;Parent=gene-CP553_RS06145;Dbxref=GenBank:WP_001831555.1;Name=WP_001831555.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468239.1;locus_tag=CP553_RS06145;product=response regulator transcription factor;protein_id=WP_001831555.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	36142	37497	.	+	.	ID=gene-CP553_RS06150;Name=CP553_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06150;old_locus_tag=CP553_06390
NZ_PCFD01000014.1	Protein Homology	CDS	36142	37497	.	+	0	ID=cds-WP_001832894.1;Parent=gene-CP553_RS06150;Dbxref=GenBank:WP_001832894.1;Name=WP_001832894.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491105.1;locus_tag=CP553_RS06150;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_001832894.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	37641	39119	.	-	.	ID=gene-CP553_RS06155;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=CP553_RS06155;old_locus_tag=CP553_06395
NZ_PCFD01000014.1	Protein Homology	CDS	37641	39119	.	-	0	ID=cds-WP_001831551.1;Parent=gene-CP553_RS06155;Dbxref=GenBank:WP_001831551.1;Name=WP_001831551.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501109.1;locus_tag=CP553_RS06155;product=malate dehydrogenase (quinone);protein_id=WP_001831551.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	39451	40596	.	+	.	ID=gene-CP553_RS06160;Name=CP553_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06160;old_locus_tag=CP553_06400
NZ_PCFD01000014.1	Protein Homology	CDS	39451	40596	.	+	0	ID=cds-WP_001831623.1;Parent=gene-CP553_RS06160;Dbxref=GenBank:WP_001831623.1;Name=WP_001831623.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457290.1;locus_tag=CP553_RS06160;product=glycosyltransferase family 4 protein;protein_id=WP_001831623.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	40801	42402	.	-	.	ID=gene-CP553_RS06165;Name=CP553_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06165;old_locus_tag=CP553_06405
NZ_PCFD01000014.1	Protein Homology	CDS	40801	42402	.	-	0	ID=cds-WP_001831564.1;Parent=gene-CP553_RS06165;Dbxref=GenBank:WP_001831564.1;Name=WP_001831564.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477096.1;locus_tag=CP553_RS06165;product=L-lactate permease;protein_id=WP_001831564.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	42752	44431	.	+	.	ID=gene-CP553_RS06170;Name=CP553_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06170;old_locus_tag=CP553_06410
NZ_PCFD01000014.1	Protein Homology	CDS	42752	44431	.	+	0	ID=cds-WP_001831509.1;Parent=gene-CP553_RS06170;Dbxref=GenBank:WP_001831509.1;Name=WP_001831509.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500848.1;locus_tag=CP553_RS06170;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_001831509.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	44563	45210	.	-	.	ID=gene-CP553_RS06175;Name=CP553_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06175;old_locus_tag=CP553_06415
NZ_PCFD01000014.1	Protein Homology	CDS	44563	45210	.	-	0	ID=cds-WP_002456066.1;Parent=gene-CP553_RS06175;Dbxref=GenBank:WP_002456066.1;Name=WP_002456066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500847.1;locus_tag=CP553_RS06175;product=hypothetical protein;protein_id=WP_002456066.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	45339	47504	.	-	.	ID=gene-CP553_RS06180;Name=CP553_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06180;old_locus_tag=CP553_06420
NZ_PCFD01000014.1	Protein Homology	CDS	45339	47504	.	-	0	ID=cds-WP_001831435.1;Parent=gene-CP553_RS06180;Dbxref=GenBank:WP_001831435.1;Name=WP_001831435.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447216.1;locus_tag=CP553_RS06180;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_001831435.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	47776	48315	.	-	.	ID=gene-CP553_RS06185;Name=CP553_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06185;old_locus_tag=CP553_06425
NZ_PCFD01000014.1	Protein Homology	CDS	47776	48315	.	-	0	ID=cds-WP_002438360.1;Parent=gene-CP553_RS06185;Dbxref=GenBank:WP_002438360.1;Name=WP_002438360.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485928.1;locus_tag=CP553_RS06185;product=GNAT family N-acetyltransferase;protein_id=WP_002438360.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	48556	49548	.	+	.	ID=gene-CP553_RS06190;Name=CP553_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06190;old_locus_tag=CP553_06430
NZ_PCFD01000014.1	Protein Homology	CDS	48556	49548	.	+	0	ID=cds-WP_002438357.1;Parent=gene-CP553_RS06190;Dbxref=GenBank:WP_002438357.1;Name=WP_002438357.1;Ontology_term=GO:0016655,GO:0048038,GO:0070402;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501848.1;locus_tag=CP553_RS06190;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_002438357.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	49612	50013	.	-	.	ID=gene-CP553_RS06195;Name=CP553_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06195;old_locus_tag=CP553_06435
NZ_PCFD01000014.1	Protein Homology	CDS	49612	50013	.	-	0	ID=cds-WP_002438356.1;Parent=gene-CP553_RS06195;Dbxref=GenBank:WP_002438356.1;Name=WP_002438356.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457295.1;locus_tag=CP553_RS06195;product=GNAT family N-acetyltransferase;protein_id=WP_002438356.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	50082	50498	.	-	.	ID=gene-CP553_RS06200;Name=CP553_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06200;old_locus_tag=CP553_06440
NZ_PCFD01000014.1	Protein Homology	CDS	50082	50498	.	-	0	ID=cds-WP_001831504.1;Parent=gene-CP553_RS06200;Dbxref=GenBank:WP_001831504.1;Name=WP_001831504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457296.1;locus_tag=CP553_RS06200;product=DUF2871 domain-containing protein;protein_id=WP_001831504.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	50712	51011	.	-	.	ID=gene-CP553_RS12900;Name=CP553_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12900;old_locus_tag=CP553_06445
NZ_PCFD01000014.1	Protein Homology	CDS	50712	51011	.	-	0	ID=cds-WP_107508710.1;Parent=gene-CP553_RS12900;Dbxref=GenBank:WP_107508710.1;Name=WP_107508710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831412.1;locus_tag=CP553_RS12900;product=DUF1775 domain-containing protein;protein_id=WP_107508710.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	51035	51304	.	-	.	ID=gene-CP553_RS12905;Name=CP553_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12905;old_locus_tag=CP553_06450
NZ_PCFD01000014.1	Protein Homology	CDS	51035	51304	.	-	0	ID=cds-WP_064635313.1;Parent=gene-CP553_RS12905;Dbxref=GenBank:WP_064635313.1;Name=WP_064635313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486071.1;locus_tag=CP553_RS12905;product=DUF1775 domain-containing protein;protein_id=WP_064635313.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	51330	51785	.	-	.	ID=gene-CP553_RS12790;Name=CP553_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12790;old_locus_tag=CP553_06455
NZ_PCFD01000014.1	Protein Homology	CDS	51330	51785	.	-	0	ID=cds-WP_002438352.1;Parent=gene-CP553_RS12790;Dbxref=GenBank:WP_002438352.1;Name=WP_002438352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488868.1;locus_tag=CP553_RS12790;product=copper-binding protein;protein_id=WP_002438352.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	51788	52069	.	-	.	ID=gene-CP553_RS12795;Name=CP553_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12795;old_locus_tag=CP553_06460
NZ_PCFD01000014.1	Protein Homology	CDS	51788	52069	.	-	0	ID=cds-WP_002438351.1;Parent=gene-CP553_RS12795;Dbxref=GenBank:WP_002438351.1;Name=WP_002438351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438351.1;locus_tag=CP553_RS12795;product=hypothetical protein;protein_id=WP_002438351.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	52159	52545	.	-	.	ID=gene-CP553_RS12800;Name=CP553_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12800;old_locus_tag=CP553_06465
NZ_PCFD01000014.1	Protein Homology	CDS	52159	52545	.	-	0	ID=cds-WP_002493319.1;Parent=gene-CP553_RS12800;Dbxref=GenBank:WP_002493319.1;Name=WP_002493319.1;Ontology_term=GO:0046688,GO:0005507,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=copper ion binding|0005507||IEA;go_process=response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493319.1;locus_tag=CP553_RS12800;product=copper resistance CopC family protein;protein_id=WP_002493319.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	53170	54117	.	+	.	ID=gene-CP553_RS06220;Name=CP553_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06220;old_locus_tag=CP553_06470
NZ_PCFD01000014.1	Protein Homology	CDS	53170	54117	.	+	0	ID=cds-WP_002438349.1;Parent=gene-CP553_RS06220;Dbxref=GenBank:WP_002438349.1;Name=WP_002438349.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831471.1;locus_tag=CP553_RS06220;product=magnesium transporter CorA family protein;protein_id=WP_002438349.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	54207	55652	.	-	.	ID=gene-CP553_RS06225;Name=CP553_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06225;old_locus_tag=CP553_06475
NZ_PCFD01000014.1	Protein Homology	CDS	54207	55652	.	-	0	ID=cds-WP_002456063.1;Parent=gene-CP553_RS06225;Dbxref=GenBank:WP_002456063.1;Name=WP_002456063.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474489.1;locus_tag=CP553_RS06225;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_002456063.1;transl_table=11
NZ_PCFD01000014.1	RefSeq	gene	55806	56183	.	+	.	ID=gene-CP553_RS06230;Name=CP553_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06230;old_locus_tag=CP553_06480
NZ_PCFD01000014.1	Protein Homology	CDS	55806	56183	.	+	0	ID=cds-WP_001831516.1;Parent=gene-CP553_RS06230;Dbxref=GenBank:WP_001831516.1;Name=WP_001831516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487021.1;locus_tag=CP553_RS06230;product=YbgA family protein;protein_id=WP_001831516.1;transl_table=11
##sequence-region NZ_PCFD01000015.1 1 51544
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000015.1	RefSeq	region	1	51544	.	+	.	ID=NZ_PCFD01000015.1:1..51544;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000015.1	RefSeq	gene	155	1438	.	-	.	ID=gene-CP553_RS06235;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=CP553_RS06235;old_locus_tag=CP553_06485
NZ_PCFD01000015.1	Protein Homology	CDS	155	1438	.	-	0	ID=cds-WP_002456470.1;Parent=gene-CP553_RS06235;Dbxref=GenBank:WP_002456470.1;Name=WP_002456470.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275558.1;locus_tag=CP553_RS06235;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_002456470.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	1462	2436	.	-	.	ID=gene-CP553_RS06240;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=CP553_RS06240;old_locus_tag=CP553_06490
NZ_PCFD01000015.1	Protein Homology	CDS	1462	2436	.	-	0	ID=cds-WP_002440176.1;Parent=gene-CP553_RS06240;Dbxref=GenBank:WP_002440176.1;Name=WP_002440176.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001633925.1;locus_tag=CP553_RS06240;product=porphobilinogen synthase;protein_id=WP_002440176.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	2426	3106	.	-	.	ID=gene-CP553_RS06245;Name=CP553_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06245;old_locus_tag=CP553_06495
NZ_PCFD01000015.1	Protein Homology	CDS	2426	3106	.	-	0	ID=cds-WP_001832668.1;Parent=gene-CP553_RS06245;Dbxref=GenBank:WP_001832668.1;Name=WP_001832668.1;Ontology_term=GO:0006780,GO:0006782,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,protoporphyrinogen IX biosynthetic process|0006782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497970.1;locus_tag=CP553_RS06245;product=uroporphyrinogen-III synthase;protein_id=WP_001832668.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	3140	4066	.	-	.	ID=gene-CP553_RS06250;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=CP553_RS06250;old_locus_tag=CP553_06500
NZ_PCFD01000015.1	Protein Homology	CDS	3140	4066	.	-	0	ID=cds-WP_001830811.1;Parent=gene-CP553_RS06250;Dbxref=GenBank:WP_001830811.1;Name=WP_001830811.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474759.1;locus_tag=CP553_RS06250;product=hydroxymethylbilane synthase;protein_id=WP_001830811.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	4120	4932	.	-	.	ID=gene-CP553_RS06255;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=CP553_RS06255;old_locus_tag=CP553_06505
NZ_PCFD01000015.1	Protein Homology	CDS	4120	4932	.	-	0	ID=cds-WP_001832714.1;Parent=gene-CP553_RS06255;Dbxref=GenBank:WP_001832714.1;Name=WP_001832714.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457800.1;locus_tag=CP553_RS06255;product=cytochrome c biogenesis protein;protein_id=WP_001832714.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	4954	6300	.	-	.	ID=gene-CP553_RS06260;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=CP553_RS06260;old_locus_tag=CP553_06510
NZ_PCFD01000015.1	Protein Homology	CDS	4954	6300	.	-	0	ID=cds-WP_116842994.1;Parent=gene-CP553_RS06260;Dbxref=GenBank:WP_116842994.1;Name=WP_116842994.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500281.1;locus_tag=CP553_RS06260;product=glutamyl-tRNA reductase;protein_id=WP_116842994.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	6470	7057	.	-	.	ID=gene-CP553_RS06265;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=CP553_RS06265;old_locus_tag=CP553_06515
NZ_PCFD01000015.1	Protein Homology	CDS	6470	7057	.	-	0	ID=cds-WP_001830838.1;Parent=gene-CP553_RS06265;Dbxref=GenBank:WP_001830838.1;Name=WP_001830838.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275552.1;locus_tag=CP553_RS06265;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_001830838.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	7169	8431	.	-	.	ID=gene-CP553_RS06270;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=CP553_RS06270;old_locus_tag=CP553_06520
NZ_PCFD01000015.1	Protein Homology	CDS	7169	8431	.	-	0	ID=cds-WP_001830765.1;Parent=gene-CP553_RS06270;Dbxref=GenBank:WP_001830765.1;Name=WP_001830765.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830765.1;locus_tag=CP553_RS06270;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_001830765.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	8718	10019	.	-	.	ID=gene-CP553_RS06275;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=CP553_RS06275;old_locus_tag=CP553_06525
NZ_PCFD01000015.1	Protein Homology	CDS	8718	10019	.	-	0	ID=cds-WP_001830810.1;Parent=gene-CP553_RS06275;Dbxref=GenBank:WP_001830810.1;Name=WP_001830810.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500284.1;locus_tag=CP553_RS06275;product=trigger factor;protein_id=WP_001830810.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	10180	11103	.	-	.	ID=gene-CP553_RS06280;Name=CP553_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06280;old_locus_tag=CP553_06530
NZ_PCFD01000015.1	Protein Homology	CDS	10180	11103	.	-	0	ID=cds-WP_001830807.1;Parent=gene-CP553_RS06280;Dbxref=GenBank:WP_001830807.1;Name=WP_001830807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485659.1;locus_tag=CP553_RS06280;product=hypothetical protein;protein_id=WP_001830807.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	11120	11731	.	-	.	ID=gene-CP553_RS06285;Name=CP553_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06285;old_locus_tag=CP553_06535
NZ_PCFD01000015.1	Protein Homology	CDS	11120	11731	.	-	0	ID=cds-WP_001830874.1;Parent=gene-CP553_RS06285;Dbxref=GenBank:WP_001830874.1;Name=WP_001830874.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464981.1;locus_tag=CP553_RS06285;product=NUDIX domain-containing protein;protein_id=WP_001830874.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	12149	12505	.	-	.	ID=gene-CP553_RS06290;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=CP553_RS06290;old_locus_tag=CP553_06540
NZ_PCFD01000015.1	Protein Homology	CDS	12149	12505	.	-	0	ID=cds-WP_001830839.1;Parent=gene-CP553_RS06290;Dbxref=GenBank:WP_001830839.1;Name=WP_001830839.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500289.1;locus_tag=CP553_RS06290;product=50S ribosomal protein L20;protein_id=WP_001830839.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	12557	12757	.	-	.	ID=gene-CP553_RS06295;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=CP553_RS06295;old_locus_tag=CP553_06545
NZ_PCFD01000015.1	Protein Homology	CDS	12557	12757	.	-	0	ID=cds-WP_001830767.1;Parent=gene-CP553_RS06295;Dbxref=GenBank:WP_001830767.1;Name=WP_001830767.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1;locus_tag=CP553_RS06295;product=50S ribosomal protein L35;protein_id=WP_001830767.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	12785	13312	.	-	.	ID=gene-CP553_RS06300;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=CP553_RS06300;old_locus_tag=CP553_06550
NZ_PCFD01000015.1	Protein Homology	CDS	12785	13312	.	-	0	ID=cds-WP_001830789.1;Parent=gene-CP553_RS06300;Dbxref=GenBank:WP_001830789.1;Name=WP_001830789.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500291.1;locus_tag=CP553_RS06300;product=translation initiation factor IF-3;protein_id=WP_001830789.1;transl_table=11
NZ_PCFD01000015.1	cmsearch	sequence_feature	13339	13462	.	-	.	ID=id-NZ_PCFD01000015.1:13339..13462;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PCFD01000015.1	RefSeq	gene	13520	15022	.	-	.	ID=gene-CP553_RS06305;Name=CP553_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06305;old_locus_tag=CP553_06555
NZ_PCFD01000015.1	Protein Homology	CDS	13520	15022	.	-	0	ID=cds-WP_001830900.1;Parent=gene-CP553_RS06305;Dbxref=GenBank:WP_001830900.1;Name=WP_001830900.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502349.1;locus_tag=CP553_RS06305;product=amino acid permease;protein_id=WP_001830900.1;transl_table=11
NZ_PCFD01000015.1	cmsearch	riboswitch	15228	15403	.	-	.	ID=id-NZ_PCFD01000015.1:15228..15403;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000015.1	RefSeq	gene	15451	17388	.	-	.	ID=gene-CP553_RS06310;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=CP553_RS06310;old_locus_tag=CP553_06560
NZ_PCFD01000015.1	Protein Homology	CDS	15451	17388	.	-	0	ID=cds-WP_002440177.1;Parent=gene-CP553_RS06310;Dbxref=GenBank:WP_002440177.1;Name=WP_002440177.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500293.1;locus_tag=CP553_RS06310;product=threonine--tRNA ligase;protein_id=WP_002440177.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	17741	18661	.	-	.	ID=gene-CP553_RS06315;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=CP553_RS06315;old_locus_tag=CP553_06565
NZ_PCFD01000015.1	Protein Homology	CDS	17741	18661	.	-	0	ID=cds-WP_001830772.1;Parent=gene-CP553_RS06315;Dbxref=GenBank:WP_001830772.1;Name=WP_001830772.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464979.1;locus_tag=CP553_RS06315;product=primosomal protein DnaI;protein_id=WP_001830772.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	18661	20031	.	-	.	ID=gene-CP553_RS06320;Name=CP553_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06320;old_locus_tag=CP553_06570
NZ_PCFD01000015.1	Protein Homology	CDS	18661	20031	.	-	0	ID=cds-WP_002440178.1;Parent=gene-CP553_RS06320;Dbxref=GenBank:WP_002440178.1;Name=WP_002440178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457808.1;locus_tag=CP553_RS06320;product=replication initiation and membrane attachment family protein;protein_id=WP_002440178.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	20032	20502	.	-	.	ID=gene-CP553_RS06325;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=CP553_RS06325;old_locus_tag=CP553_06575
NZ_PCFD01000015.1	Protein Homology	CDS	20032	20502	.	-	0	ID=cds-WP_001830825.1;Parent=gene-CP553_RS06325;Dbxref=GenBank:WP_001830825.1;Name=WP_001830825.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830825.1;locus_tag=CP553_RS06325;product=transcriptional regulator NrdR;protein_id=WP_001830825.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	21022	22047	.	-	.	ID=gene-CP553_RS06335;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=CP553_RS06335;old_locus_tag=CP553_06580
NZ_PCFD01000015.1	Protein Homology	CDS	21022	22047	.	-	0	ID=cds-WP_002440179.1;Parent=gene-CP553_RS06335;Dbxref=GenBank:WP_002440179.1;Name=WP_002440179.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361946.1;locus_tag=CP553_RS06335;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002440179.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	pseudogene	22153	22536	.	-	.	ID=gene-CP553_RS06340;Name=CP553_RS06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS06340;old_locus_tag=CP553_06585;partial=true;pseudo=true;start_range=.,22153
NZ_PCFD01000015.1	Protein Homology	CDS	22153	22536	.	-	0	ID=cds-CP553_RS06340;Parent=gene-CP553_RS06340;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494449.1;locus_tag=CP553_RS06340;partial=true;product=transposase;pseudo=true;start_range=.,22153;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	22891	23502	.	-	.	ID=gene-CP553_RS06345;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=CP553_RS06345;old_locus_tag=CP553_06590
NZ_PCFD01000015.1	Protein Homology	CDS	22891	23502	.	-	0	ID=cds-WP_001830774.1;Parent=gene-CP553_RS06345;Dbxref=GenBank:WP_001830774.1;Name=WP_001830774.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485286.1;locus_tag=CP553_RS06345;product=dephospho-CoA kinase;protein_id=WP_001830774.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	23518	24390	.	-	.	ID=gene-CP553_RS06350;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=CP553_RS06350;old_locus_tag=CP553_06595
NZ_PCFD01000015.1	Protein Homology	CDS	23518	24390	.	-	0	ID=cds-WP_001830823.1;Parent=gene-CP553_RS06350;Dbxref=GenBank:WP_001830823.1;Name=WP_001830823.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473981.1;locus_tag=CP553_RS06350;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001830823.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	24406	27036	.	-	.	ID=gene-CP553_RS06355;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=CP553_RS06355;old_locus_tag=CP553_06600
NZ_PCFD01000015.1	Protein Homology	CDS	24406	27036	.	-	0	ID=cds-WP_002440182.1;Parent=gene-CP553_RS06355;Dbxref=GenBank:WP_002440182.1;Name=WP_002440182.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500301.1;locus_tag=CP553_RS06355;product=DNA polymerase I;protein_id=WP_002440182.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	27331	29028	.	-	.	ID=gene-CP553_RS06360;Name=pnpS;gbkey=Gene;gene=pnpS;gene_biotype=protein_coding;locus_tag=CP553_RS06360;old_locus_tag=CP553_06605
NZ_PCFD01000015.1	Protein Homology	CDS	27331	29028	.	-	0	ID=cds-WP_116842995.1;Parent=gene-CP553_RS06360;Dbxref=GenBank:WP_116842995.1;Name=WP_116842995.1;Ontology_term=GO:0016310,GO:0000155;gbkey=CDS;gene=pnpS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486197.1;locus_tag=CP553_RS06360;product=two-component system histidine kinase PnpS;protein_id=WP_116842995.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	29028	29738	.	-	.	ID=gene-CP553_RS06365;Name=CP553_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06365;old_locus_tag=CP553_06610
NZ_PCFD01000015.1	Protein Homology	CDS	29028	29738	.	-	0	ID=cds-WP_001830897.1;Parent=gene-CP553_RS06365;Dbxref=GenBank:WP_001830897.1;Name=WP_001830897.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176131.1;locus_tag=CP553_RS06365;product=response regulator transcription factor;protein_id=WP_001830897.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	30054	31322	.	-	.	ID=gene-CP553_RS06370;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=CP553_RS06370;old_locus_tag=CP553_06615
NZ_PCFD01000015.1	Protein Homology	CDS	30054	31322	.	-	0	ID=cds-WP_002456157.1;Parent=gene-CP553_RS06370;Dbxref=GenBank:WP_002456157.1;Name=WP_002456157.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500306.1;locus_tag=CP553_RS06370;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_002456157.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	31365	32486	.	-	.	ID=gene-CP553_RS06375;Name=CP553_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06375;old_locus_tag=CP553_06620
NZ_PCFD01000015.1	Protein Homology	CDS	31365	32486	.	-	0	ID=cds-WP_002440189.1;Parent=gene-CP553_RS06375;Dbxref=GenBank:WP_002440189.1;Name=WP_002440189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502341.1;locus_tag=CP553_RS06375;product=citrate synthase;protein_id=WP_002440189.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	32834	34192	.	+	.	ID=gene-CP553_RS06380;Name=CP553_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06380;old_locus_tag=CP553_06625
NZ_PCFD01000015.1	Protein Homology	CDS	32834	34192	.	+	0	ID=cds-WP_001830761.1;Parent=gene-CP553_RS06380;Dbxref=GenBank:WP_001830761.1;Name=WP_001830761.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494481.1;locus_tag=CP553_RS06380;product=amino acid permease;protein_id=WP_001830761.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	34635	36392	.	-	.	ID=gene-CP553_RS06385;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=CP553_RS06385;old_locus_tag=CP553_06630
NZ_PCFD01000015.1	Protein Homology	CDS	34635	36392	.	-	0	ID=cds-WP_001830831.1;Parent=gene-CP553_RS06385;Dbxref=GenBank:WP_001830831.1;Name=WP_001830831.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500311.1;locus_tag=CP553_RS06385;product=pyruvate kinase;protein_id=WP_001830831.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	36416	37384	.	-	.	ID=gene-CP553_RS06390;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=CP553_RS06390;old_locus_tag=CP553_06635
NZ_PCFD01000015.1	Protein Homology	CDS	36416	37384	.	-	0	ID=cds-WP_002440192.1;Parent=gene-CP553_RS06390;Dbxref=GenBank:WP_002440192.1;Name=WP_002440192.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462395.1;locus_tag=CP553_RS06390;product=6-phosphofructokinase;protein_id=WP_002440192.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	37562	38506	.	-	.	ID=gene-CP553_RS06395;Name=CP553_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06395;old_locus_tag=CP553_06640
NZ_PCFD01000015.1	Protein Homology	CDS	37562	38506	.	-	0	ID=cds-WP_002440194.1;Parent=gene-CP553_RS06395;Dbxref=GenBank:WP_002440194.1;Name=WP_002440194.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500313.1;locus_tag=CP553_RS06395;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_002440194.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	38506	39363	.	-	.	ID=gene-CP553_RS06400;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=CP553_RS06400;old_locus_tag=CP553_06645
NZ_PCFD01000015.1	Protein Homology	CDS	38506	39363	.	-	0	ID=cds-WP_002440197.1;Parent=gene-CP553_RS06400;Dbxref=GenBank:WP_002440197.1;Name=WP_002440197.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440197.1;locus_tag=CP553_RS06400;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_002440197.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	39462	40691	.	-	.	ID=gene-CP553_RS06405;Name=CP553_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06405;old_locus_tag=CP553_06650
NZ_PCFD01000015.1	Protein Homology	CDS	39462	40691	.	-	0	ID=cds-WP_002440198.1;Parent=gene-CP553_RS06405;Dbxref=GenBank:WP_002440198.1;Name=WP_002440198.1;Ontology_term=GO:0004471,GO:0004473,GO:0046872,GO:0051287;gbkey=CDS;go_function=malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,malate dehydrogenase (decarboxylating) (NADP+) activity|0004473||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500315.1;locus_tag=CP553_RS06405;product=NAD(P)-dependent malic enzyme;protein_id=WP_002440198.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	40995	44192	.	-	.	ID=gene-CP553_RS06410;Name=CP553_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06410;old_locus_tag=CP553_06655
NZ_PCFD01000015.1	Protein Homology	CDS	40995	44192	.	-	0	ID=cds-WP_002440200.1;Parent=gene-CP553_RS06410;Dbxref=GenBank:WP_002440200.1;Name=WP_002440200.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485290.1;locus_tag=CP553_RS06410;product=DNA polymerase III subunit alpha;protein_id=WP_002440200.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	44216	45154	.	-	.	ID=gene-CP553_RS06415;Name=CP553_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06415;old_locus_tag=CP553_06660
NZ_PCFD01000015.1	Protein Homology	CDS	44216	45154	.	-	0	ID=cds-WP_002440202.1;Parent=gene-CP553_RS06415;Dbxref=GenBank:WP_002440202.1;Name=WP_002440202.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440202.1;locus_tag=CP553_RS06415;product=DHH family phosphoesterase;protein_id=WP_002440202.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	45188	46486	.	-	.	ID=gene-CP553_RS06420;Name=CP553_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06420;old_locus_tag=CP553_06665
NZ_PCFD01000015.1	Protein Homology	CDS	45188	46486	.	-	0	ID=cds-WP_001830890.1;Parent=gene-CP553_RS06420;Dbxref=GenBank:WP_001830890.1;Name=WP_001830890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012096478.1;locus_tag=CP553_RS06420;product=DRTGG domain-containing protein;protein_id=WP_001830890.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	46684	47097	.	+	.	ID=gene-CP553_RS06425;Name=CP553_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06425;old_locus_tag=CP553_06670
NZ_PCFD01000015.1	Protein Homology	CDS	46684	47097	.	+	0	ID=cds-WP_001830808.1;Parent=gene-CP553_RS06425;Dbxref=GenBank:WP_001830808.1;Name=WP_001830808.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500319.1;locus_tag=CP553_RS06425;product=universal stress protein;protein_id=WP_001830808.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	47398	48087	.	-	.	ID=gene-CP553_RS06430;Name=CP553_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06430;old_locus_tag=CP553_06675
NZ_PCFD01000015.1	Protein Homology	CDS	47398	48087	.	-	0	ID=cds-WP_001830786.1;Parent=gene-CP553_RS06430;Dbxref=GenBank:WP_001830786.1;Name=WP_001830786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500320.1;locus_tag=CP553_RS06430;product=metal-dependent hydrolase;protein_id=WP_001830786.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	48259	49314	.	+	.	ID=gene-CP553_RS06435;Name=CP553_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06435;old_locus_tag=CP553_06680
NZ_PCFD01000015.1	Protein Homology	CDS	48259	49314	.	+	0	ID=cds-WP_001830888.1;Parent=gene-CP553_RS06435;Dbxref=GenBank:WP_001830888.1;Name=WP_001830888.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500321.1;locus_tag=CP553_RS06435;product=M24 family metallopeptidase;protein_id=WP_001830888.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	49378	50493	.	-	.	ID=gene-CP553_RS06440;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=CP553_RS06440;old_locus_tag=CP553_06685
NZ_PCFD01000015.1	Protein Homology	CDS	49378	50493	.	-	0	ID=cds-WP_001830775.1;Parent=gene-CP553_RS06440;Dbxref=GenBank:WP_001830775.1;Name=WP_001830775.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830775.1;locus_tag=CP553_RS06440;product=alanine dehydrogenase;protein_id=WP_001830775.1;transl_table=11
NZ_PCFD01000015.1	RefSeq	gene	50641	51141	.	+	.	ID=gene-CP553_RS06445;Name=CP553_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06445;old_locus_tag=CP553_06690
NZ_PCFD01000015.1	Protein Homology	CDS	50641	51141	.	+	0	ID=cds-WP_002494483.1;Parent=gene-CP553_RS06445;Dbxref=GenBank:WP_002494483.1;Name=WP_002494483.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500324.1;locus_tag=CP553_RS06445;product=universal stress protein;protein_id=WP_002494483.1;transl_table=11
##sequence-region NZ_PCFD01000016.1 1 51425
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000016.1	RefSeq	region	1	51425	.	+	.	ID=NZ_PCFD01000016.1:1..51425;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000016.1	RefSeq	gene	1	308	.	-	.	ID=gene-CP553_RS06450;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=CP553_RS06450;old_locus_tag=CP553_06695;partial=true;start_range=.,1
NZ_PCFD01000016.1	Protein Homology	CDS	1	308	.	-	0	ID=cds-WP_116842996.1;Parent=gene-CP553_RS06450;Dbxref=GenBank:WP_116842996.1;Name=WP_116842996.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CP553_RS06450;partial=true;product=IS200/IS605 family transposase;protein_id=WP_116842996.1;start_range=.,1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	524	970	.	-	.	ID=gene-CP553_RS06455;Name=CP553_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06455;old_locus_tag=CP553_06700
NZ_PCFD01000016.1	Protein Homology	CDS	524	970	.	-	0	ID=cds-WP_001831825.1;Parent=gene-CP553_RS06455;Dbxref=GenBank:WP_001831825.1;Name=WP_001831825.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446968.1;locus_tag=CP553_RS06455;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001831825.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	1142	2791	.	+	.	ID=gene-CP553_RS06460;Name=CP553_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06460;old_locus_tag=CP553_06705
NZ_PCFD01000016.1	Protein Homology	CDS	1142	2791	.	+	0	ID=cds-WP_002437948.1;Parent=gene-CP553_RS06460;Dbxref=GenBank:WP_002437948.1;Name=WP_002437948.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446967.1;locus_tag=CP553_RS06460;product=alpha-keto acid decarboxylase family protein;protein_id=WP_002437948.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	3138	4304	.	-	.	ID=gene-CP553_RS06465;Name=CP553_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06465;old_locus_tag=CP553_06715
NZ_PCFD01000016.1	Protein Homology	CDS	3138	4304	.	-	0	ID=cds-WP_001831857.1;Parent=gene-CP553_RS06465;Dbxref=GenBank:WP_001831857.1;Name=WP_001831857.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497783.1;locus_tag=CP553_RS06465;product=CapA family protein;protein_id=WP_001831857.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	4558	5316	.	-	.	ID=gene-CP553_RS06470;Name=CP553_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06470;old_locus_tag=CP553_06720
NZ_PCFD01000016.1	Protein Homology	CDS	4558	5316	.	-	0	ID=cds-WP_002437945.1;Parent=gene-CP553_RS06470;Dbxref=GenBank:WP_002437945.1;Name=WP_002437945.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458330.1;locus_tag=CP553_RS06470;product=alpha/beta hydrolase;protein_id=WP_002437945.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	5608	6294	.	-	.	ID=gene-CP553_RS06475;Name=CP553_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06475;old_locus_tag=CP553_06725
NZ_PCFD01000016.1	Protein Homology	CDS	5608	6294	.	-	0	ID=cds-WP_002437943.1;Parent=gene-CP553_RS06475;Dbxref=GenBank:WP_002437943.1;Name=WP_002437943.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437943.1;locus_tag=CP553_RS06475;product=Crp/Fnr family transcriptional regulator;protein_id=WP_002437943.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	6513	7916	.	-	.	ID=gene-CP553_RS06480;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=CP553_RS06480;old_locus_tag=CP553_06730
NZ_PCFD01000016.1	Protein Homology	CDS	6513	7916	.	-	0	ID=cds-WP_002437941.1;Parent=gene-CP553_RS06480;Dbxref=GenBank:WP_002437941.1;Name=WP_002437941.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495989.1;locus_tag=CP553_RS06480;product=arginine-ornithine antiporter;protein_id=WP_002437941.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	8181	9188	.	-	.	ID=gene-CP553_RS06485;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CP553_RS06485;old_locus_tag=CP553_06735
NZ_PCFD01000016.1	Protein Homology	CDS	8181	9188	.	-	0	ID=cds-WP_002467833.1;Parent=gene-CP553_RS06485;Dbxref=GenBank:WP_002467833.1;Name=WP_002467833.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831886.1;locus_tag=CP553_RS06485;product=ornithine carbamoyltransferase;protein_id=WP_002467833.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	9293	10528	.	-	.	ID=gene-CP553_RS06490;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CP553_RS06490;old_locus_tag=CP553_06740
NZ_PCFD01000016.1	Protein Homology	CDS	9293	10528	.	-	0	ID=cds-WP_002437936.1;Parent=gene-CP553_RS06490;Dbxref=GenBank:WP_002437936.1;Name=WP_002437936.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501419.1;locus_tag=CP553_RS06490;product=arginine deiminase;protein_id=WP_002437936.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	10867	11328	.	-	.	ID=gene-CP553_RS06495;Name=CP553_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06495;old_locus_tag=CP553_06745
NZ_PCFD01000016.1	Protein Homology	CDS	10867	11328	.	-	0	ID=cds-WP_001831858.1;Parent=gene-CP553_RS06495;Dbxref=GenBank:WP_001831858.1;Name=WP_001831858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501868.1;locus_tag=CP553_RS06495;product=arginine repressor;protein_id=WP_001831858.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	11842	13365	.	-	.	ID=gene-CP553_RS06500;Name=CP553_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06500;old_locus_tag=CP553_06750
NZ_PCFD01000016.1	Protein Homology	CDS	11842	13365	.	-	0	ID=cds-WP_002437929.1;Parent=gene-CP553_RS06500;Dbxref=GenBank:WP_002437929.1;Name=WP_002437929.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456744.1;locus_tag=CP553_RS06500;product=M4 family metallopeptidase;protein_id=WP_002437929.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	13798	15042	.	-	.	ID=gene-CP553_RS06505;Name=CP553_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06505;old_locus_tag=CP553_06755
NZ_PCFD01000016.1	Protein Homology	CDS	13798	15042	.	-	0	ID=cds-WP_002437925.1;Parent=gene-CP553_RS06505;Dbxref=GenBank:WP_002437925.1;Name=WP_002437925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503250.1;locus_tag=CP553_RS06505;product=ArgE/DapE family deacylase;protein_id=WP_002437925.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	15381	15881	.	+	.	ID=gene-CP553_RS06510;Name=CP553_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06510;old_locus_tag=CP553_06760
NZ_PCFD01000016.1	Protein Homology	CDS	15381	15881	.	+	0	ID=cds-WP_002437921.1;Parent=gene-CP553_RS06510;Dbxref=GenBank:WP_002437921.1;Name=WP_002437921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831854.1;locus_tag=CP553_RS06510;product=hypothetical protein;protein_id=WP_002437921.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	16086	17000	.	+	.	ID=gene-CP553_RS06515;Name=CP553_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06515;old_locus_tag=CP553_06765
NZ_PCFD01000016.1	Protein Homology	CDS	16086	17000	.	+	0	ID=cds-WP_002470706.1;Parent=gene-CP553_RS06515;Dbxref=GenBank:WP_002470706.1;Name=WP_002470706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456747.1;locus_tag=CP553_RS06515;product=DUF1672 domain-containing protein;protein_id=WP_002470706.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	17104	18018	.	+	.	ID=gene-CP553_RS06520;Name=CP553_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06520;old_locus_tag=CP553_06770
NZ_PCFD01000016.1	Protein Homology	CDS	17104	18018	.	+	0	ID=cds-WP_002487793.1;Parent=gene-CP553_RS06520;Dbxref=GenBank:WP_002487793.1;Name=WP_002487793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467799.1;locus_tag=CP553_RS06520;product=DUF1672 domain-containing protein;protein_id=WP_002487793.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	18499	19278	.	-	.	ID=gene-CP553_RS06525;Name=CP553_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06525;old_locus_tag=CP553_06780
NZ_PCFD01000016.1	Protein Homology	CDS	18499	19278	.	-	0	ID=cds-WP_001831826.1;Parent=gene-CP553_RS06525;Dbxref=GenBank:WP_001831826.1;Name=WP_001831826.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase (NAD+) activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458838.1;locus_tag=CP553_RS06525;product=(S)-acetoin forming diacetyl reductase;protein_id=WP_001831826.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	19578	19712	.	+	.	ID=gene-CP553_RS06530;Name=CP553_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06530;old_locus_tag=CP553_06785
NZ_PCFD01000016.1	Protein Homology	CDS	19578	19712	.	+	0	ID=cds-WP_001831873.1;Parent=gene-CP553_RS06530;Dbxref=GenBank:WP_001831873.1;Name=WP_001831873.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017308.6;locus_tag=CP553_RS06530;product=beta-class phenol-soluble modulin;protein_id=WP_001831873.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	20030	21901	.	+	.	ID=gene-CP553_RS06535;Name=CP553_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06535;old_locus_tag=CP553_06790
NZ_PCFD01000016.1	Protein Homology	CDS	20030	21901	.	+	0	ID=cds-WP_002437911.1;Parent=gene-CP553_RS06535;Dbxref=GenBank:WP_002437911.1;Name=WP_002437911.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505841.1;locus_tag=CP553_RS06535;product=BglG family transcription antiterminator;protein_id=WP_002437911.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	21986	23926	.	+	.	ID=gene-CP553_RS06540;Name=CP553_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06540;old_locus_tag=CP553_06795
NZ_PCFD01000016.1	Protein Homology	CDS	21986	23926	.	+	0	ID=cds-WP_002456327.1;Parent=gene-CP553_RS06540;Dbxref=GenBank:WP_002456327.1;Name=WP_002456327.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458339.1;locus_tag=CP553_RS06540;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_002456327.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	23942	24892	.	+	.	ID=gene-CP553_RS06545;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=CP553_RS06545;old_locus_tag=CP553_06800
NZ_PCFD01000016.1	Protein Homology	CDS	23942	24892	.	+	0	ID=cds-WP_001831892.1;Parent=gene-CP553_RS06545;Dbxref=GenBank:WP_001831892.1;Name=WP_001831892.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505843.1;locus_tag=CP553_RS06545;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_001831892.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	25203	28061	.	-	.	ID=gene-CP553_RS06550;Name=CP553_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06550;old_locus_tag=CP553_06805
NZ_PCFD01000016.1	Protein Homology	CDS	25203	28061	.	-	0	ID=cds-WP_002456326.1;Parent=gene-CP553_RS06550;Dbxref=GenBank:WP_002456326.1;Name=WP_002456326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834639.1;locus_tag=CP553_RS06550;product=YhgE/Pip domain-containing protein;protein_id=WP_002456326.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	28349	30316	.	+	.	ID=gene-CP553_RS06555;Name=CP553_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06555;old_locus_tag=CP553_06810
NZ_PCFD01000016.1	Protein Homology	CDS	28349	30316	.	+	0	ID=cds-WP_001831881.1;Parent=gene-CP553_RS06555;Dbxref=GenBank:WP_001831881.1;Name=WP_001831881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477232.1;locus_tag=CP553_RS06555;product=amidase domain-containing protein;protein_id=WP_001831881.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	30684	32714	.	-	.	ID=gene-CP553_RS06560;Name=CP553_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06560;old_locus_tag=CP553_06815
NZ_PCFD01000016.1	Protein Homology	CDS	30684	32714	.	-	0	ID=cds-WP_001831890.1;Parent=gene-CP553_RS06560;Dbxref=GenBank:WP_001831890.1;Name=WP_001831890.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511277.1;locus_tag=CP553_RS06560;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_001831890.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	32964	33392	.	+	.	ID=gene-CP553_RS06565;Name=CP553_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06565;old_locus_tag=CP553_06820
NZ_PCFD01000016.1	Protein Homology	CDS	32964	33392	.	+	0	ID=cds-WP_001831844.1;Parent=gene-CP553_RS06565;Dbxref=GenBank:WP_001831844.1;Name=WP_001831844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473994.1;locus_tag=CP553_RS06565;product=organic hydroperoxide resistance protein;protein_id=WP_001831844.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	33706	33882	.	+	.	ID=gene-CP553_RS06570;Name=CP553_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06570;old_locus_tag=CP553_06830
NZ_PCFD01000016.1	Protein Homology	CDS	33706	33882	.	+	0	ID=cds-WP_001831885.1;Parent=gene-CP553_RS06570;Dbxref=GenBank:WP_001831885.1;Name=WP_001831885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477234.1;locus_tag=CP553_RS06570;product=hypothetical protein;protein_id=WP_001831885.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	34081	34236	.	-	.	ID=gene-CP553_RS06575;Name=CP553_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06575
NZ_PCFD01000016.1	GeneMarkS-2+	CDS	34081	34236	.	-	0	ID=cds-WP_001831859.1;Parent=gene-CP553_RS06575;Dbxref=GenBank:WP_001831859.1;Name=WP_001831859.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS06575;product=hypothetical protein;protein_id=WP_001831859.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	pseudogene	34631	35318	.	-	.	ID=gene-CP553_RS06580;Name=CP553_RS06580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS06580;old_locus_tag=CP553_06835;pseudo=true
NZ_PCFD01000016.1	Protein Homology	CDS	34631	35318	.	-	0	ID=cds-CP553_RS06580;Parent=gene-CP553_RS06580;Note=frameshifted;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468475.1;locus_tag=CP553_RS06580;product=flavin reductase family protein;pseudo=true;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	35480	36652	.	-	.	ID=gene-CP553_RS06585;Name=CP553_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06585;old_locus_tag=CP553_06840
NZ_PCFD01000016.1	Protein Homology	CDS	35480	36652	.	-	0	ID=cds-WP_002437889.1;Parent=gene-CP553_RS06585;Dbxref=GenBank:WP_002437889.1;Name=WP_002437889.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831878.1;locus_tag=CP553_RS06585;product=MFS transporter;protein_id=WP_002437889.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	36993	37349	.	+	.	ID=gene-CP553_RS06590;Name=CP553_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06590;old_locus_tag=CP553_06845
NZ_PCFD01000016.1	Protein Homology	CDS	36993	37349	.	+	0	ID=cds-WP_002437887.1;Parent=gene-CP553_RS06590;Dbxref=GenBank:WP_002437887.1;Name=WP_002437887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437887.1;locus_tag=CP553_RS06590;product=hypothetical protein;protein_id=WP_002437887.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	pseudogene	37497	37976	.	-	.	ID=gene-CP553_RS06595;Name=CP553_RS06595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS06595;old_locus_tag=CP553_06850;pseudo=true
NZ_PCFD01000016.1	Protein Homology	CDS	37497	37976	.	-	0	ID=cds-CP553_RS06595;Parent=gene-CP553_RS06595;Note=internal stop;Ontology_term=GO:0008113;gbkey=CDS;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473206.1;locus_tag=CP553_RS06595;product=peptide-methionine (S)-S-oxide reductase;pseudo=true;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	38146	38493	.	-	.	ID=gene-CP553_RS06600;Name=CP553_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06600;old_locus_tag=CP553_06855
NZ_PCFD01000016.1	Protein Homology	CDS	38146	38493	.	-	0	ID=cds-WP_001831842.1;Parent=gene-CP553_RS06600;Dbxref=GenBank:WP_001831842.1;Name=WP_001831842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473211.1;locus_tag=CP553_RS06600;product=membrane protein;protein_id=WP_001831842.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	38599	39939	.	-	.	ID=gene-CP553_RS06605;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=CP553_RS06605;old_locus_tag=CP553_06860
NZ_PCFD01000016.1	Protein Homology	CDS	38599	39939	.	-	0	ID=cds-WP_001831861.1;Parent=gene-CP553_RS06605;Dbxref=GenBank:WP_001831861.1;Name=WP_001831861.1;Ontology_term=GO:0031647;gbkey=CDS;gene=gtfB;go_process=regulation of protein stability|0031647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368578.1;locus_tag=CP553_RS06605;product=accessory Sec system glycosylation chaperone GtfB;protein_id=WP_001831861.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	39932	41440	.	-	.	ID=gene-CP553_RS06610;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=CP553_RS06610;old_locus_tag=CP553_06865
NZ_PCFD01000016.1	Protein Homology	CDS	39932	41440	.	-	0	ID=cds-WP_002437882.1;Parent=gene-CP553_RS06610;Dbxref=GenBank:WP_002437882.1;Name=WP_002437882.1;Ontology_term=GO:0016757;gbkey=CDS;gene=gtfA;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959330.1;locus_tag=CP553_RS06610;product=accessory Sec system glycosyltransferase GtfA;protein_id=WP_002437882.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	41458	43848	.	-	.	ID=gene-CP553_RS06615;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=CP553_RS06615;old_locus_tag=CP553_06870
NZ_PCFD01000016.1	Protein Homology	CDS	41458	43848	.	-	0	ID=cds-WP_002456324.1;Parent=gene-CP553_RS06615;Dbxref=GenBank:WP_002456324.1;Name=WP_002456324.1;Ontology_term=GO:0015031,GO:0015450;gbkey=CDS;gene=secA2;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437880.1;locus_tag=CP553_RS06615;product=accessory Sec system translocase SecA2;protein_id=WP_002456324.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	43841	44413	.	-	.	ID=gene-CP553_RS06620;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=CP553_RS06620;old_locus_tag=CP553_06875
NZ_PCFD01000016.1	Protein Homology	CDS	43841	44413	.	-	0	ID=cds-WP_002437878.1;Parent=gene-CP553_RS06620;Dbxref=GenBank:WP_002437878.1;Name=WP_002437878.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp3;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437878.1;locus_tag=CP553_RS06620;product=accessory Sec system protein Asp3;protein_id=WP_002437878.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	44400	45968	.	-	.	ID=gene-CP553_RS06625;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=CP553_RS06625;old_locus_tag=CP553_06880
NZ_PCFD01000016.1	Protein Homology	CDS	44400	45968	.	-	0	ID=cds-WP_153647357.1;Parent=gene-CP553_RS06625;Dbxref=GenBank:WP_153647357.1;Name=WP_153647357.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360698.1;locus_tag=CP553_RS06625;product=accessory Sec system protein Asp2;protein_id=WP_153647357.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	45949	47505	.	-	.	ID=gene-CP553_RS06630;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=CP553_RS06630;old_locus_tag=CP553_06885
NZ_PCFD01000016.1	Protein Homology	CDS	45949	47505	.	-	0	ID=cds-WP_001831836.1;Parent=gene-CP553_RS06630;Dbxref=GenBank:WP_001831836.1;Name=WP_001831836.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp1;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493770.1;locus_tag=CP553_RS06630;product=accessory Sec system protein Asp1;protein_id=WP_001831836.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	gene	47523	48722	.	-	.	ID=gene-CP553_RS06635;Name=secY2;gbkey=Gene;gene=secY2;gene_biotype=protein_coding;locus_tag=CP553_RS06635;old_locus_tag=CP553_06890
NZ_PCFD01000016.1	Protein Homology	CDS	47523	48722	.	-	0	ID=cds-WP_001831846.1;Parent=gene-CP553_RS06635;Dbxref=GenBank:WP_001831846.1;Name=WP_001831846.1;Ontology_term=GO:0006886;gbkey=CDS;gene=secY2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477246.1;locus_tag=CP553_RS06635;product=accessory Sec system protein translocase subunit SecY2;protein_id=WP_001831846.1;transl_table=11
NZ_PCFD01000016.1	RefSeq	pseudogene	48865	51425	.	-	.	ID=gene-CP553_RS13000;Name=CP553_RS13000;end_range=51425,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS13000;partial=true;pseudo=true
NZ_PCFD01000016.1	Protein Homology	CDS	48865	51425	.	-	2	ID=cds-CP553_RS13000;Parent=gene-CP553_RS13000;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=51425,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470707.1;locus_tag=CP553_RS13000;partial=true;product=adhesin;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000017.1 1 48951
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000017.1	RefSeq	region	1	48951	.	+	.	ID=NZ_PCFD01000017.1:1..48951;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000017.1	RefSeq	gene	6	120	.	+	.	ID=gene-CP553_RS06655;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CP553_RS06655;old_locus_tag=CP553_06910
NZ_PCFD01000017.1	cmsearch	rRNA	6	120	.	+	.	ID=rna-CP553_RS06655;Parent=gene-CP553_RS06655;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS06655;product=5S ribosomal RNA
NZ_PCFD01000017.1	cmsearch	exon	6	120	.	+	.	ID=exon-CP553_RS06655-1;Parent=rna-CP553_RS06655;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS06655;product=5S ribosomal RNA
NZ_PCFD01000017.1	RefSeq	gene	131	206	.	+	.	ID=gene-CP553_RS06660;Name=CP553_RS06660;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06660;old_locus_tag=CP553_06915
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	131	206	.	+	.	ID=rna-CP553_RS06660;Parent=gene-CP553_RS06660;anticodon=(pos:164..166);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06660;product=tRNA-Val
NZ_PCFD01000017.1	tRNAscan-SE	exon	131	206	.	+	.	ID=exon-CP553_RS06660-1;Parent=rna-CP553_RS06660;anticodon=(pos:164..166);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06660;product=tRNA-Val
NZ_PCFD01000017.1	RefSeq	gene	213	288	.	+	.	ID=gene-CP553_RS06665;Name=CP553_RS06665;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06665;old_locus_tag=CP553_06920
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	213	288	.	+	.	ID=rna-CP553_RS06665;Parent=gene-CP553_RS06665;anticodon=(pos:246..248);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06665;product=tRNA-Thr
NZ_PCFD01000017.1	tRNAscan-SE	exon	213	288	.	+	.	ID=exon-CP553_RS06665-1;Parent=rna-CP553_RS06665;anticodon=(pos:246..248);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06665;product=tRNA-Thr
NZ_PCFD01000017.1	RefSeq	gene	295	370	.	+	.	ID=gene-CP553_RS06670;Name=CP553_RS06670;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06670;old_locus_tag=CP553_06925
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	295	370	.	+	.	ID=rna-CP553_RS06670;Parent=gene-CP553_RS06670;anticodon=(pos:328..330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06670;product=tRNA-Lys
NZ_PCFD01000017.1	tRNAscan-SE	exon	295	370	.	+	.	ID=exon-CP553_RS06670-1;Parent=rna-CP553_RS06670;anticodon=(pos:328..330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06670;product=tRNA-Lys
NZ_PCFD01000017.1	RefSeq	gene	379	461	.	+	.	ID=gene-CP553_RS06675;Name=CP553_RS06675;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06675;old_locus_tag=CP553_06930
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	379	461	.	+	.	ID=rna-CP553_RS06675;Parent=gene-CP553_RS06675;anticodon=(pos:413..415);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06675;product=tRNA-Leu
NZ_PCFD01000017.1	tRNAscan-SE	exon	379	461	.	+	.	ID=exon-CP553_RS06675-1;Parent=rna-CP553_RS06675;anticodon=(pos:413..415);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06675;product=tRNA-Leu
NZ_PCFD01000017.1	RefSeq	gene	465	539	.	+	.	ID=gene-CP553_RS06680;Name=CP553_RS06680;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06680;old_locus_tag=CP553_06935
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	465	539	.	+	.	ID=rna-CP553_RS06680;Parent=gene-CP553_RS06680;anticodon=(pos:497..499);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06680;product=tRNA-Gly
NZ_PCFD01000017.1	tRNAscan-SE	exon	465	539	.	+	.	ID=exon-CP553_RS06680-1;Parent=rna-CP553_RS06680;anticodon=(pos:497..499);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06680;product=tRNA-Gly
NZ_PCFD01000017.1	RefSeq	gene	551	639	.	+	.	ID=gene-CP553_RS06685;Name=CP553_RS06685;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06685;old_locus_tag=CP553_06940
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	551	639	.	+	.	ID=rna-CP553_RS06685;Parent=gene-CP553_RS06685;anticodon=(pos:585..587);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06685;product=tRNA-Leu
NZ_PCFD01000017.1	tRNAscan-SE	exon	551	639	.	+	.	ID=exon-CP553_RS06685-1;Parent=rna-CP553_RS06685;anticodon=(pos:585..587);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06685;product=tRNA-Leu
NZ_PCFD01000017.1	RefSeq	gene	652	725	.	+	.	ID=gene-CP553_RS06690;Name=CP553_RS06690;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06690;old_locus_tag=CP553_06945
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	652	725	.	+	.	ID=rna-CP553_RS06690;Parent=gene-CP553_RS06690;anticodon=(pos:686..688);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06690;product=tRNA-Arg
NZ_PCFD01000017.1	tRNAscan-SE	exon	652	725	.	+	.	ID=exon-CP553_RS06690-1;Parent=rna-CP553_RS06690;anticodon=(pos:686..688);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06690;product=tRNA-Arg
NZ_PCFD01000017.1	RefSeq	gene	735	808	.	+	.	ID=gene-CP553_RS06695;Name=CP553_RS06695;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06695;old_locus_tag=CP553_06950
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	735	808	.	+	.	ID=rna-CP553_RS06695;Parent=gene-CP553_RS06695;anticodon=(pos:769..771);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06695;product=tRNA-Pro
NZ_PCFD01000017.1	tRNAscan-SE	exon	735	808	.	+	.	ID=exon-CP553_RS06695-1;Parent=rna-CP553_RS06695;anticodon=(pos:769..771);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06695;product=tRNA-Pro
NZ_PCFD01000017.1	RefSeq	gene	825	900	.	+	.	ID=gene-CP553_RS06700;Name=CP553_RS06700;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06700;old_locus_tag=CP553_06955
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	825	900	.	+	.	ID=rna-CP553_RS06700;Parent=gene-CP553_RS06700;anticodon=(pos:858..860);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06700;product=tRNA-Ala
NZ_PCFD01000017.1	tRNAscan-SE	exon	825	900	.	+	.	ID=exon-CP553_RS06700-1;Parent=rna-CP553_RS06700;anticodon=(pos:858..860);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06700;product=tRNA-Ala
NZ_PCFD01000017.1	RefSeq	gene	925	998	.	+	.	ID=gene-CP553_RS06705;Name=CP553_RS06705;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06705;old_locus_tag=CP553_06960
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	925	998	.	+	.	ID=rna-CP553_RS06705;Parent=gene-CP553_RS06705;anticodon=(pos:959..961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06705;product=tRNA-Met
NZ_PCFD01000017.1	tRNAscan-SE	exon	925	998	.	+	.	ID=exon-CP553_RS06705-1;Parent=rna-CP553_RS06705;anticodon=(pos:959..961);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06705;product=tRNA-Met
NZ_PCFD01000017.1	RefSeq	gene	1026	1099	.	+	.	ID=gene-CP553_RS06710;Name=CP553_RS06710;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06710;old_locus_tag=CP553_06965
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	1026	1099	.	+	.	ID=rna-CP553_RS06710;Parent=gene-CP553_RS06710;anticodon=(pos:1060..1062);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06710;product=tRNA-Ile
NZ_PCFD01000017.1	tRNAscan-SE	exon	1026	1099	.	+	.	ID=exon-CP553_RS06710-1;Parent=rna-CP553_RS06710;anticodon=(pos:1060..1062);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06710;product=tRNA-Ile
NZ_PCFD01000017.1	RefSeq	gene	1109	1198	.	+	.	ID=gene-CP553_RS06715;Name=CP553_RS06715;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06715;old_locus_tag=CP553_06970
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	1109	1198	.	+	.	ID=rna-CP553_RS06715;Parent=gene-CP553_RS06715;anticodon=(pos:1145..1147);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06715;product=tRNA-Ser
NZ_PCFD01000017.1	tRNAscan-SE	exon	1109	1198	.	+	.	ID=exon-CP553_RS06715-1;Parent=rna-CP553_RS06715;anticodon=(pos:1145..1147);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06715;product=tRNA-Ser
NZ_PCFD01000017.1	RefSeq	gene	1206	1281	.	+	.	ID=gene-CP553_RS06720;Name=CP553_RS06720;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06720;old_locus_tag=CP553_06975
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	1206	1281	.	+	.	ID=rna-CP553_RS06720;Parent=gene-CP553_RS06720;anticodon=(pos:1239..1241);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06720;product=tRNA-Asp
NZ_PCFD01000017.1	tRNAscan-SE	exon	1206	1281	.	+	.	ID=exon-CP553_RS06720-1;Parent=rna-CP553_RS06720;anticodon=(pos:1239..1241);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06720;product=tRNA-Asp
NZ_PCFD01000017.1	RefSeq	gene	1319	1411	.	+	.	ID=gene-CP553_RS06725;Name=CP553_RS06725;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06725;old_locus_tag=CP553_06980
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	1319	1411	.	+	.	ID=rna-CP553_RS06725;Parent=gene-CP553_RS06725;anticodon=(pos:1355..1357);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06725;product=tRNA-Ser
NZ_PCFD01000017.1	tRNAscan-SE	exon	1319	1411	.	+	.	ID=exon-CP553_RS06725-1;Parent=rna-CP553_RS06725;anticodon=(pos:1355..1357);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06725;product=tRNA-Ser
NZ_PCFD01000017.1	RefSeq	gene	1423	1496	.	+	.	ID=gene-CP553_RS06730;Name=CP553_RS06730;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06730;old_locus_tag=CP553_06985
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	1423	1496	.	+	.	ID=rna-CP553_RS06730;Parent=gene-CP553_RS06730;anticodon=(pos:1457..1459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06730;product=tRNA-Met
NZ_PCFD01000017.1	tRNAscan-SE	exon	1423	1496	.	+	.	ID=exon-CP553_RS06730-1;Parent=rna-CP553_RS06730;anticodon=(pos:1457..1459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06730;product=tRNA-Met
NZ_PCFD01000017.1	RefSeq	gene	1601	1673	.	+	.	ID=gene-CP553_RS06735;Name=CP553_RS06735;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06735;old_locus_tag=CP553_06990
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	1601	1673	.	+	.	ID=rna-CP553_RS06735;Parent=gene-CP553_RS06735;anticodon=(pos:1634..1636);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06735;product=tRNA-Phe
NZ_PCFD01000017.1	tRNAscan-SE	exon	1601	1673	.	+	.	ID=exon-CP553_RS06735-1;Parent=rna-CP553_RS06735;anticodon=(pos:1634..1636);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06735;product=tRNA-Phe
NZ_PCFD01000017.1	RefSeq	gene	1682	1757	.	+	.	ID=gene-CP553_RS06740;Name=CP553_RS06740;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06740;old_locus_tag=CP553_06995
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	1682	1757	.	+	.	ID=rna-CP553_RS06740;Parent=gene-CP553_RS06740;anticodon=(pos:1715..1717);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06740;product=tRNA-Thr
NZ_PCFD01000017.1	tRNAscan-SE	exon	1682	1757	.	+	.	ID=exon-CP553_RS06740-1;Parent=rna-CP553_RS06740;anticodon=(pos:1715..1717);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06740;product=tRNA-Thr
NZ_PCFD01000017.1	RefSeq	gene	1762	1845	.	+	.	ID=gene-CP553_RS06745;Name=CP553_RS06745;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06745;old_locus_tag=CP553_07000
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	1762	1845	.	+	.	ID=rna-CP553_RS06745;Parent=gene-CP553_RS06745;anticodon=(pos:1796..1798);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06745;product=tRNA-Tyr
NZ_PCFD01000017.1	tRNAscan-SE	exon	1762	1845	.	+	.	ID=exon-CP553_RS06745-1;Parent=rna-CP553_RS06745;anticodon=(pos:1796..1798);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06745;product=tRNA-Tyr
NZ_PCFD01000017.1	RefSeq	gene	1854	1927	.	+	.	ID=gene-CP553_RS06750;Name=CP553_RS06750;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06750;old_locus_tag=CP553_07005
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	1854	1927	.	+	.	ID=rna-CP553_RS06750;Parent=gene-CP553_RS06750;anticodon=(pos:1886..1888);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06750;product=tRNA-Trp
NZ_PCFD01000017.1	tRNAscan-SE	exon	1854	1927	.	+	.	ID=exon-CP553_RS06750-1;Parent=rna-CP553_RS06750;anticodon=(pos:1886..1888);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06750;product=tRNA-Trp
NZ_PCFD01000017.1	RefSeq	gene	1930	2002	.	+	.	ID=gene-CP553_RS06755;Name=CP553_RS06755;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06755;old_locus_tag=CP553_07010
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	1930	2002	.	+	.	ID=rna-CP553_RS06755;Parent=gene-CP553_RS06755;anticodon=(pos:1963..1965);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06755;product=tRNA-His
NZ_PCFD01000017.1	tRNAscan-SE	exon	1930	2002	.	+	.	ID=exon-CP553_RS06755-1;Parent=rna-CP553_RS06755;anticodon=(pos:1963..1965);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06755;product=tRNA-His
NZ_PCFD01000017.1	RefSeq	gene	2014	2085	.	+	.	ID=gene-CP553_RS06760;Name=CP553_RS06760;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06760;old_locus_tag=CP553_07015
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	2014	2085	.	+	.	ID=rna-CP553_RS06760;Parent=gene-CP553_RS06760;anticodon=(pos:2046..2048);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06760;product=tRNA-Gln
NZ_PCFD01000017.1	tRNAscan-SE	exon	2014	2085	.	+	.	ID=exon-CP553_RS06760-1;Parent=rna-CP553_RS06760;anticodon=(pos:2046..2048);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06760;product=tRNA-Gln
NZ_PCFD01000017.1	RefSeq	gene	2091	2164	.	+	.	ID=gene-CP553_RS06765;Name=CP553_RS06765;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06765;old_locus_tag=CP553_07020
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	2091	2164	.	+	.	ID=rna-CP553_RS06765;Parent=gene-CP553_RS06765;anticodon=(pos:2123..2125);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06765;product=tRNA-Cys
NZ_PCFD01000017.1	tRNAscan-SE	exon	2091	2164	.	+	.	ID=exon-CP553_RS06765-1;Parent=rna-CP553_RS06765;anticodon=(pos:2123..2125);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06765;product=tRNA-Cys
NZ_PCFD01000017.1	RefSeq	gene	2174	2248	.	+	.	ID=gene-CP553_RS06770;Name=CP553_RS06770;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06770
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	2174	2248	.	+	.	ID=rna-CP553_RS06770;Parent=gene-CP553_RS06770;anticodon=(pos:2207..2209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06770;product=tRNA-Gly
NZ_PCFD01000017.1	tRNAscan-SE	exon	2174	2248	.	+	.	ID=exon-CP553_RS06770-1;Parent=rna-CP553_RS06770;anticodon=(pos:2207..2209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06770;product=tRNA-Gly
NZ_PCFD01000017.1	RefSeq	gene	2263	2337	.	+	.	ID=gene-CP553_RS06775;Name=CP553_RS06775;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06775;old_locus_tag=CP553_07025
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	2263	2337	.	+	.	ID=rna-CP553_RS06775;Parent=gene-CP553_RS06775;anticodon=(pos:2296..2298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06775;product=tRNA-Gly
NZ_PCFD01000017.1	tRNAscan-SE	exon	2263	2337	.	+	.	ID=exon-CP553_RS06775-1;Parent=rna-CP553_RS06775;anticodon=(pos:2296..2298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06775;product=tRNA-Gly
NZ_PCFD01000017.1	RefSeq	gene	2349	2423	.	+	.	ID=gene-CP553_RS06780;Name=CP553_RS06780;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06780
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	2349	2423	.	+	.	ID=rna-CP553_RS06780;Parent=gene-CP553_RS06780;anticodon=(pos:2382..2384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06780;product=tRNA-Gly
NZ_PCFD01000017.1	tRNAscan-SE	exon	2349	2423	.	+	.	ID=exon-CP553_RS06780-1;Parent=rna-CP553_RS06780;anticodon=(pos:2382..2384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06780;product=tRNA-Gly
NZ_PCFD01000017.1	RefSeq	gene	2464	2547	.	+	.	ID=gene-CP553_RS06785;Name=CP553_RS06785;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06785;old_locus_tag=CP553_07030
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	2464	2547	.	+	.	ID=rna-CP553_RS06785;Parent=gene-CP553_RS06785;anticodon=(pos:2498..2500);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06785;product=tRNA-Leu
NZ_PCFD01000017.1	tRNAscan-SE	exon	2464	2547	.	+	.	ID=exon-CP553_RS06785-1;Parent=rna-CP553_RS06785;anticodon=(pos:2498..2500);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06785;product=tRNA-Leu
NZ_PCFD01000017.1	RefSeq	gene	2865	3713	.	+	.	ID=gene-CP553_RS06790;Name=CP553_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06790;old_locus_tag=CP553_07035
NZ_PCFD01000017.1	Protein Homology	CDS	2865	3713	.	+	0	ID=cds-WP_001829860.1;Parent=gene-CP553_RS06790;Dbxref=GenBank:WP_001829860.1;Name=WP_001829860.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476988.1;locus_tag=CP553_RS06790;product=trypsin-like serine peptidase;protein_id=WP_001829860.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	3939	4997	.	+	.	ID=gene-CP553_RS06795;Name=CP553_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06795;old_locus_tag=CP553_07040
NZ_PCFD01000017.1	Protein Homology	CDS	3939	4997	.	+	0	ID=cds-WP_001829829.1;Parent=gene-CP553_RS06795;Dbxref=GenBank:WP_001829829.1;Name=WP_001829829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489307.1;locus_tag=CP553_RS06795;product=PTS transporter subunit IIC;protein_id=WP_001829829.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	5275	6693	.	+	.	ID=gene-CP553_RS06800;Name=CP553_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06800;old_locus_tag=CP553_07045
NZ_PCFD01000017.1	Protein Homology	CDS	5275	6693	.	+	0	ID=cds-WP_002456348.1;Parent=gene-CP553_RS06800;Dbxref=GenBank:WP_002456348.1;Name=WP_002456348.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468504.1;locus_tag=CP553_RS06800;product=ABC transporter substrate-binding protein/permease;protein_id=WP_002456348.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	6686	7408	.	+	.	ID=gene-CP553_RS06805;Name=CP553_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06805;old_locus_tag=CP553_07050
NZ_PCFD01000017.1	Protein Homology	CDS	6686	7408	.	+	0	ID=cds-WP_001829838.1;Parent=gene-CP553_RS06805;Dbxref=GenBank:WP_001829838.1;Name=WP_001829838.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465289.1;locus_tag=CP553_RS06805;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_001829838.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	7905	8060	.	+	.	ID=gene-CP553_RS06810;Name=CP553_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06810
NZ_PCFD01000017.1	GeneMarkS-2+	CDS	7905	8060	.	+	0	ID=cds-WP_001829854.1;Parent=gene-CP553_RS06810;Dbxref=GenBank:WP_001829854.1;Name=WP_001829854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS06810;product=hypothetical protein;protein_id=WP_001829854.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	8270	9400	.	+	.	ID=gene-CP553_RS06815;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=CP553_RS06815;old_locus_tag=CP553_07055
NZ_PCFD01000017.1	Protein Homology	CDS	8270	9400	.	+	0	ID=cds-WP_001829814.1;Parent=gene-CP553_RS06815;Dbxref=GenBank:WP_001829814.1;Name=WP_001829814.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829814.1;locus_tag=CP553_RS06815;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001829814.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	9397	9867	.	+	.	ID=gene-CP553_RS06820;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=CP553_RS06820;old_locus_tag=CP553_07060
NZ_PCFD01000017.1	Protein Homology	CDS	9397	9867	.	+	0	ID=cds-WP_001829836.1;Parent=gene-CP553_RS06820;Dbxref=GenBank:WP_001829836.1;Name=WP_001829836.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500485.1;locus_tag=CP553_RS06820;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_001829836.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	10025	10624	.	+	.	ID=gene-CP553_RS06825;Name=CP553_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06825;old_locus_tag=CP553_07065
NZ_PCFD01000017.1	Protein Homology	CDS	10025	10624	.	+	0	ID=cds-WP_001829848.1;Parent=gene-CP553_RS06825;Dbxref=GenBank:WP_001829848.1;Name=WP_001829848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500484.1;locus_tag=CP553_RS06825;product=6-phosphogluconolactonase;protein_id=WP_001829848.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	10648	10827	.	+	.	ID=gene-CP553_RS06830;Name=CP553_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06830;old_locus_tag=CP553_07070
NZ_PCFD01000017.1	Protein Homology	CDS	10648	10827	.	+	0	ID=cds-WP_002468490.1;Parent=gene-CP553_RS06830;Dbxref=GenBank:WP_002468490.1;Name=WP_002468490.1;Ontology_term=GO:0090729;gbkey=CDS;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468490.1;locus_tag=CP553_RS06830;product=SAS053 family DNA gyrase inhibitor;protein_id=WP_002468490.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	10983	11387	.	+	.	ID=gene-CP553_RS06835;Name=CP553_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06835;old_locus_tag=CP553_07075
NZ_PCFD01000017.1	Protein Homology	CDS	10983	11387	.	+	0	ID=cds-WP_001829818.1;Parent=gene-CP553_RS06835;Dbxref=GenBank:WP_001829818.1;Name=WP_001829818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474495.1;locus_tag=CP553_RS06835;product=hypothetical protein;protein_id=WP_001829818.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	11572	12957	.	+	.	ID=gene-CP553_RS06840;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=CP553_RS06840;old_locus_tag=CP553_07080
NZ_PCFD01000017.1	Protein Homology	CDS	11572	12957	.	+	0	ID=cds-WP_001829862.1;Parent=gene-CP553_RS06840;Dbxref=GenBank:WP_001829862.1;Name=WP_001829862.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116229.1;locus_tag=CP553_RS06840;product=class II fumarate hydratase;protein_id=WP_001829862.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	13318	14142	.	-	.	ID=gene-CP553_RS06845;Name=CP553_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06845;old_locus_tag=CP553_07085
NZ_PCFD01000017.1	Protein Homology	CDS	13318	14142	.	-	0	ID=cds-WP_001829804.1;Parent=gene-CP553_RS06845;Dbxref=GenBank:WP_001829804.1;Name=WP_001829804.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501168.1;locus_tag=CP553_RS06845;product=RluA family pseudouridine synthase;protein_id=WP_001829804.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	14301	15434	.	+	.	ID=gene-CP553_RS06850;Name=CP553_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06850;old_locus_tag=CP553_07090
NZ_PCFD01000017.1	Protein Homology	CDS	14301	15434	.	+	0	ID=cds-WP_001829819.1;Parent=gene-CP553_RS06850;Dbxref=GenBank:WP_001829819.1;Name=WP_001829819.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005515,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475949.1;locus_tag=CP553_RS06850;product=GAF domain-containing sensor histidine kinase;protein_id=WP_001829819.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	15427	16050	.	+	.	ID=gene-CP553_RS06855;Name=CP553_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06855;old_locus_tag=CP553_07095
NZ_PCFD01000017.1	Protein Homology	CDS	15427	16050	.	+	0	ID=cds-WP_001829810.1;Parent=gene-CP553_RS06855;Dbxref=GenBank:WP_001829810.1;Name=WP_001829810.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500477.1;locus_tag=CP553_RS06855;product=response regulator;protein_id=WP_001829810.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	16321	16785	.	+	.	ID=gene-CP553_RS06860;Name=xdrA;gbkey=Gene;gene=xdrA;gene_biotype=protein_coding;locus_tag=CP553_RS06860;old_locus_tag=CP553_07100
NZ_PCFD01000017.1	Protein Homology	CDS	16321	16785	.	+	0	ID=cds-WP_001829807.1;Parent=gene-CP553_RS06860;Dbxref=GenBank:WP_001829807.1;Name=WP_001829807.1;gbkey=CDS;gene=xdrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500476.1;locus_tag=CP553_RS06860;product=XRE family transcriptional regulator XdrA;protein_id=WP_001829807.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	16967	18097	.	+	.	ID=gene-CP553_RS06865;Name=CP553_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06865;old_locus_tag=CP553_07105
NZ_PCFD01000017.1	Protein Homology	CDS	16967	18097	.	+	0	ID=cds-WP_002485606.1;Parent=gene-CP553_RS06865;Dbxref=GenBank:WP_002485606.1;Name=WP_002485606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495600.1;locus_tag=CP553_RS06865;product=DUF445 domain-containing protein;protein_id=WP_002485606.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	18170	18514	.	+	.	ID=gene-CP553_RS06870;Name=CP553_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06870;old_locus_tag=CP553_07110
NZ_PCFD01000017.1	Protein Homology	CDS	18170	18514	.	+	0	ID=cds-WP_001829805.1;Parent=gene-CP553_RS06870;Dbxref=GenBank:WP_001829805.1;Name=WP_001829805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498160.1;locus_tag=CP553_RS06870;product=YlbF/YmcA family competence regulator;protein_id=WP_001829805.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	18785	19981	.	+	.	ID=gene-CP553_RS06875;Name=CP553_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06875;old_locus_tag=CP553_07115
NZ_PCFD01000017.1	Protein Homology	CDS	18785	19981	.	+	0	ID=cds-WP_001829843.1;Parent=gene-CP553_RS06875;Dbxref=GenBank:WP_001829843.1;Name=WP_001829843.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500472.1;locus_tag=CP553_RS06875;product=metallophosphoesterase family protein;protein_id=WP_001829843.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	19971	22910	.	+	.	ID=gene-CP553_RS06880;Name=CP553_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06880;old_locus_tag=CP553_07120
NZ_PCFD01000017.1	Protein Homology	CDS	19971	22910	.	+	0	ID=cds-WP_002440289.1;Parent=gene-CP553_RS06880;Dbxref=GenBank:WP_002440289.1;Name=WP_002440289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489111.1;locus_tag=CP553_RS06880;product=ATP-binding protein;protein_id=WP_002440289.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	22907	23848	.	+	.	ID=gene-CP553_RS06885;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=protein_coding;locus_tag=CP553_RS06885;old_locus_tag=CP553_07125
NZ_PCFD01000017.1	Protein Homology	CDS	22907	23848	.	+	0	ID=cds-WP_001829856.1;Parent=gene-CP553_RS06885;Dbxref=GenBank:WP_001829856.1;Name=WP_001829856.1;gbkey=CDS;gene=yhaM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500470.1;locus_tag=CP553_RS06885;product=3'-5' exoribonuclease YhaM;protein_id=WP_001829856.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	24020	24124	.	+	.	ID=gene-CP553_RS06890;Name=CP553_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06890;old_locus_tag=CP553_07130
NZ_PCFD01000017.1	Protein Homology	CDS	24020	24124	.	+	0	ID=cds-WP_002440288.1;Parent=gene-CP553_RS06890;Dbxref=GenBank:WP_002440288.1;Name=WP_002440288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502120.1;locus_tag=CP553_RS06890;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_002440288.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	24274	25251	.	-	.	ID=gene-CP553_RS06895;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=CP553_RS06895;old_locus_tag=CP553_07135
NZ_PCFD01000017.1	Protein Homology	CDS	24274	25251	.	-	0	ID=cds-WP_001829859.1;Parent=gene-CP553_RS06895;Dbxref=GenBank:WP_001829859.1;Name=WP_001829859.1;gbkey=CDS;gene=prsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490116.1;locus_tag=CP553_RS06895;product=peptidylprolyl isomerase PrsA;protein_id=WP_001829859.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	25453	26013	.	-	.	ID=gene-CP553_RS06900;Name=CP553_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06900;old_locus_tag=CP553_07140
NZ_PCFD01000017.1	Protein Homology	CDS	25453	26013	.	-	0	ID=cds-WP_001829837.1;Parent=gene-CP553_RS06900;Dbxref=GenBank:WP_001829837.1;Name=WP_001829837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474659.1;locus_tag=CP553_RS06900;product=DUF3267 domain-containing protein;protein_id=WP_001829837.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	26179	26550	.	-	.	ID=gene-CP553_RS06905;Name=CP553_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06905;old_locus_tag=CP553_07145
NZ_PCFD01000017.1	Protein Homology	CDS	26179	26550	.	-	0	ID=cds-WP_001829821.1;Parent=gene-CP553_RS06905;Dbxref=GenBank:WP_001829821.1;Name=WP_001829821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456353.1;locus_tag=CP553_RS06905;product=YtxH domain-containing protein;protein_id=WP_001829821.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	26627	27052	.	-	.	ID=gene-CP553_RS06910;Name=CP553_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06910;old_locus_tag=CP553_07150
NZ_PCFD01000017.1	Protein Homology	CDS	26627	27052	.	-	0	ID=cds-WP_001829828.1;Parent=gene-CP553_RS06910;Dbxref=GenBank:WP_001829828.1;Name=WP_001829828.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505405.1;locus_tag=CP553_RS06910;product=HIT family protein;protein_id=WP_001829828.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	27182	27922	.	+	.	ID=gene-CP553_RS06915;Name=ecsA;gbkey=Gene;gene=ecsA;gene_biotype=protein_coding;locus_tag=CP553_RS06915;old_locus_tag=CP553_07155
NZ_PCFD01000017.1	Protein Homology	CDS	27182	27922	.	+	0	ID=cds-WP_001829855.1;Parent=gene-CP553_RS06915;Dbxref=GenBank:WP_001829855.1;Name=WP_001829855.1;gbkey=CDS;gene=ecsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457875.1;locus_tag=CP553_RS06915;product=ABC transporter ATP-binding protein EcsA;protein_id=WP_001829855.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	27915	29138	.	+	.	ID=gene-CP553_RS06920;Name=ecsB;gbkey=Gene;gene=ecsB;gene_biotype=protein_coding;locus_tag=CP553_RS06920;old_locus_tag=CP553_07160
NZ_PCFD01000017.1	Protein Homology	CDS	27915	29138	.	+	0	ID=cds-WP_001829820.1;Parent=gene-CP553_RS06920;Dbxref=GenBank:WP_001829820.1;Name=WP_001829820.1;gbkey=CDS;gene=ecsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363845.1;locus_tag=CP553_RS06920;product=ABC transporter permease EcsB;protein_id=WP_001829820.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	29197	29814	.	+	.	ID=gene-CP553_RS06925;Name=CP553_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06925;old_locus_tag=CP553_07165
NZ_PCFD01000017.1	Protein Homology	CDS	29197	29814	.	+	0	ID=cds-WP_001829861.1;Parent=gene-CP553_RS06925;Dbxref=GenBank:WP_001829861.1;Name=WP_001829861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465246.1;locus_tag=CP553_RS06925;product=CadD family cadmium resistance transporter;protein_id=WP_001829861.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	30377	30880	.	-	.	ID=gene-CP553_RS06930;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=CP553_RS06930;old_locus_tag=CP553_07170
NZ_PCFD01000017.1	Protein Homology	CDS	30377	30880	.	-	0	ID=cds-WP_116842997.1;Parent=gene-CP553_RS06930;Dbxref=GenBank:WP_116842997.1;Name=WP_116842997.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829811.1;locus_tag=CP553_RS06930;product=signal transduction protein TRAP;protein_id=WP_116842997.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	31173	32234	.	+	.	ID=gene-CP553_RS06935;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=CP553_RS06935;old_locus_tag=CP553_07175
NZ_PCFD01000017.1	Protein Homology	CDS	31173	32234	.	+	0	ID=cds-WP_161375607.1;Parent=gene-CP553_RS06935;Dbxref=GenBank:WP_161375607.1;Name=WP_161375607.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446746.1;locus_tag=CP553_RS06935;product=uroporphyrinogen decarboxylase;protein_id=WP_161375607.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	32310	33233	.	+	.	ID=gene-CP553_RS06940;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=CP553_RS06940;old_locus_tag=CP553_07180
NZ_PCFD01000017.1	Protein Homology	CDS	32310	33233	.	+	0	ID=cds-WP_001829846.1;Parent=gene-CP553_RS06940;Dbxref=GenBank:WP_001829846.1;Name=WP_001829846.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485187.1;locus_tag=CP553_RS06940;product=ferrochelatase;protein_id=WP_001829846.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	33377	34774	.	+	.	ID=gene-CP553_RS06945;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=CP553_RS06945;old_locus_tag=CP553_07185
NZ_PCFD01000017.1	Protein Homology	CDS	33377	34774	.	+	0	ID=cds-WP_001829834.1;Parent=gene-CP553_RS06945;Dbxref=GenBank:WP_001829834.1;Name=WP_001829834.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=oxygen-dependent protoporphyrinogen oxidase activity|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500459.1;locus_tag=CP553_RS06945;product=protoporphyrinogen oxidase;protein_id=WP_001829834.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	34910	35464	.	+	.	ID=gene-CP553_RS06950;Name=CP553_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06950;old_locus_tag=CP553_07190
NZ_PCFD01000017.1	Protein Homology	CDS	34910	35464	.	+	0	ID=cds-WP_001832974.1;Parent=gene-CP553_RS06950;Dbxref=GenBank:WP_001832974.1;Name=WP_001832974.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446743.1;locus_tag=CP553_RS06950;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_001832974.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	35779	35852	.	+	.	ID=gene-CP553_RS06955;Name=CP553_RS06955;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06955;old_locus_tag=CP553_07195
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	35779	35852	.	+	.	ID=rna-CP553_RS06955;Parent=gene-CP553_RS06955;anticodon=(pos:35813..35815);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06955;product=tRNA-Met
NZ_PCFD01000017.1	tRNAscan-SE	exon	35779	35852	.	+	.	ID=exon-CP553_RS06955-1;Parent=rna-CP553_RS06955;anticodon=(pos:35813..35815);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06955;product=tRNA-Met
NZ_PCFD01000017.1	RefSeq	gene	35867	35942	.	+	.	ID=gene-CP553_RS06960;Name=CP553_RS06960;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06960;old_locus_tag=CP553_07200
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	35867	35942	.	+	.	ID=rna-CP553_RS06960;Parent=gene-CP553_RS06960;anticodon=(pos:35900..35902);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06960;product=tRNA-Asp
NZ_PCFD01000017.1	tRNAscan-SE	exon	35867	35942	.	+	.	ID=exon-CP553_RS06960-1;Parent=rna-CP553_RS06960;anticodon=(pos:35900..35902);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06960;product=tRNA-Asp
NZ_PCFD01000017.1	RefSeq	gene	35953	36025	.	+	.	ID=gene-CP553_RS06965;Name=CP553_RS06965;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06965;old_locus_tag=CP553_07205
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	35953	36025	.	+	.	ID=rna-CP553_RS06965;Parent=gene-CP553_RS06965;anticodon=(pos:35986..35988);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06965;product=tRNA-Phe
NZ_PCFD01000017.1	tRNAscan-SE	exon	35953	36025	.	+	.	ID=exon-CP553_RS06965-1;Parent=rna-CP553_RS06965;anticodon=(pos:35986..35988);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06965;product=tRNA-Phe
NZ_PCFD01000017.1	RefSeq	gene	36039	36114	.	+	.	ID=gene-CP553_RS06970;Name=CP553_RS06970;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06970;old_locus_tag=CP553_07210
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	36039	36114	.	+	.	ID=rna-CP553_RS06970;Parent=gene-CP553_RS06970;anticodon=(pos:36072..36074);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06970;product=tRNA-His
NZ_PCFD01000017.1	tRNAscan-SE	exon	36039	36114	.	+	.	ID=exon-CP553_RS06970-1;Parent=rna-CP553_RS06970;anticodon=(pos:36072..36074);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06970;product=tRNA-His
NZ_PCFD01000017.1	RefSeq	gene	36132	36205	.	+	.	ID=gene-CP553_RS06975;Name=CP553_RS06975;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06975;old_locus_tag=CP553_07215
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	36132	36205	.	+	.	ID=rna-CP553_RS06975;Parent=gene-CP553_RS06975;anticodon=(pos:36164..36166);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06975;product=tRNA-Gly
NZ_PCFD01000017.1	tRNAscan-SE	exon	36132	36205	.	+	.	ID=exon-CP553_RS06975-1;Parent=rna-CP553_RS06975;anticodon=(pos:36164..36166);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06975;product=tRNA-Gly
NZ_PCFD01000017.1	RefSeq	gene	36215	36289	.	+	.	ID=gene-CP553_RS06980;Name=CP553_RS06980;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06980;old_locus_tag=CP553_07220
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	36215	36289	.	+	.	ID=rna-CP553_RS06980;Parent=gene-CP553_RS06980;anticodon=(pos:36247..36249);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06980;product=tRNA-Asn
NZ_PCFD01000017.1	tRNAscan-SE	exon	36215	36289	.	+	.	ID=exon-CP553_RS06980-1;Parent=rna-CP553_RS06980;anticodon=(pos:36247..36249);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06980;product=tRNA-Asn
NZ_PCFD01000017.1	RefSeq	gene	36291	36362	.	+	.	ID=gene-CP553_RS06985;Name=CP553_RS06985;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06985;old_locus_tag=CP553_07225
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	36291	36362	.	+	.	ID=rna-CP553_RS06985;Parent=gene-CP553_RS06985;anticodon=(pos:36324..36326);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06985;product=tRNA-Glu
NZ_PCFD01000017.1	tRNAscan-SE	exon	36291	36362	.	+	.	ID=exon-CP553_RS06985-1;Parent=rna-CP553_RS06985;anticodon=(pos:36324..36326);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06985;product=tRNA-Glu
NZ_PCFD01000017.1	RefSeq	gene	36416	36504	.	+	.	ID=gene-CP553_RS06990;Name=CP553_RS06990;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS06990;old_locus_tag=CP553_07230
NZ_PCFD01000017.1	tRNAscan-SE	tRNA	36416	36504	.	+	.	ID=rna-CP553_RS06990;Parent=gene-CP553_RS06990;anticodon=(pos:36451..36453);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06990;product=tRNA-Ser
NZ_PCFD01000017.1	tRNAscan-SE	exon	36416	36504	.	+	.	ID=exon-CP553_RS06990-1;Parent=rna-CP553_RS06990;anticodon=(pos:36451..36453);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS06990;product=tRNA-Ser
NZ_PCFD01000017.1	RefSeq	gene	37106	37678	.	-	.	ID=gene-CP553_RS06995;Name=CP553_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS06995;old_locus_tag=CP553_07235
NZ_PCFD01000017.1	Protein Homology	CDS	37106	37678	.	-	0	ID=cds-WP_001829812.1;Parent=gene-CP553_RS06995;Dbxref=GenBank:WP_001829812.1;Name=WP_001829812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489388.1;locus_tag=CP553_RS06995;product=hypothetical protein;protein_id=WP_001829812.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	37776	37997	.	-	.	ID=gene-CP553_RS07000;Name=CP553_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07000;old_locus_tag=CP553_07240
NZ_PCFD01000017.1	Protein Homology	CDS	37776	37997	.	-	0	ID=cds-WP_001829852.1;Parent=gene-CP553_RS07000;Dbxref=GenBank:WP_001829852.1;Name=WP_001829852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829852.1;locus_tag=CP553_RS07000;product=hypothetical protein;protein_id=WP_001829852.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	37966	38217	.	-	.	ID=gene-CP553_RS07005;Name=CP553_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07005;old_locus_tag=CP553_07245
NZ_PCFD01000017.1	Protein Homology	CDS	37966	38217	.	-	0	ID=cds-WP_001829835.1;Parent=gene-CP553_RS07005;Dbxref=GenBank:WP_001829835.1;Name=WP_001829835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829835.1;locus_tag=CP553_RS07005;product=hypothetical protein;protein_id=WP_001829835.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	38875	40299	.	+	.	ID=gene-CP553_RS07010;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=CP553_RS07010;old_locus_tag=CP553_07250
NZ_PCFD01000017.1	Protein Homology	CDS	38875	40299	.	+	0	ID=cds-WP_001829853.1;Parent=gene-CP553_RS07010;Dbxref=GenBank:WP_001829853.1;Name=WP_001829853.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500620.1;locus_tag=CP553_RS07010;product=o-succinylbenzoate--CoA ligase;protein_id=WP_001829853.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	40289	41290	.	+	.	ID=gene-CP553_RS07015;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=CP553_RS07015;old_locus_tag=CP553_07255
NZ_PCFD01000017.1	Protein Homology	CDS	40289	41290	.	+	0	ID=cds-WP_001829851.1;Parent=gene-CP553_RS07015;Dbxref=GenBank:WP_001829851.1;Name=WP_001829851.1;Ontology_term=GO:0009234,GO:0016829;gbkey=CDS;gene=menC;go_function=lyase activity|0016829||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829851.1;locus_tag=CP553_RS07015;product=o-succinylbenzoate synthase;protein_id=WP_001829851.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	41287	41535	.	-	.	ID=gene-CP553_RS07020;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=CP553_RS07020;old_locus_tag=CP553_07260
NZ_PCFD01000017.1	Protein Homology	CDS	41287	41535	.	-	0	ID=cds-WP_002457867.1;Parent=gene-CP553_RS07020;Dbxref=GenBank:WP_002457867.1;Name=WP_002457867.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496811.1;locus_tag=CP553_RS07020;product=membrane protein insertion efficiency factor YidD;protein_id=WP_002457867.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	41606	42073	.	+	.	ID=gene-CP553_RS07025;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=CP553_RS07025;old_locus_tag=CP553_07265
NZ_PCFD01000017.1	Protein Homology	CDS	41606	42073	.	+	0	ID=cds-WP_001829813.1;Parent=gene-CP553_RS07025;Dbxref=GenBank:WP_001829813.1;Name=WP_001829813.1;Ontology_term=GO:0006139,GO:0017111;gbkey=CDS;gene=ytkD;go_function=ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503765.1;locus_tag=CP553_RS07025;product=RNA deprotection pyrophosphohydrolase;protein_id=WP_001829813.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	42060	42845	.	+	.	ID=gene-CP553_RS07030;Name=CP553_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07030;old_locus_tag=CP553_07270
NZ_PCFD01000017.1	Protein Homology	CDS	42060	42845	.	+	0	ID=cds-WP_002440269.1;Parent=gene-CP553_RS07030;Dbxref=GenBank:WP_002440269.1;Name=WP_002440269.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498019.1;locus_tag=CP553_RS07030;product=alpha/beta hydrolase family protein;protein_id=WP_002440269.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	43076	44668	.	-	.	ID=gene-CP553_RS07035;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=CP553_RS07035;old_locus_tag=CP553_07275
NZ_PCFD01000017.1	Protein Homology	CDS	43076	44668	.	-	0	ID=cds-WP_001832979.1;Parent=gene-CP553_RS07035;Dbxref=GenBank:WP_001832979.1;Name=WP_001832979.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500411.1;locus_tag=CP553_RS07035;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_001832979.1;transl_table=11
NZ_PCFD01000017.1	cmsearch	riboswitch	44820	44929	.	+	.	ID=id-NZ_PCFD01000017.1:44820..44929;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000017.1	RefSeq	gene	45038	46237	.	+	.	ID=gene-CP553_RS07040;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=CP553_RS07040;old_locus_tag=CP553_07280
NZ_PCFD01000017.1	Protein Homology	CDS	45038	46237	.	+	0	ID=cds-WP_001829830.1;Parent=gene-CP553_RS07040;Dbxref=GenBank:WP_001829830.1;Name=WP_001829830.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829830.1;locus_tag=CP553_RS07040;product=methionine adenosyltransferase;protein_id=WP_001829830.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	46340	47248	.	+	.	ID=gene-CP553_RS07045;Name=CP553_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07045;old_locus_tag=CP553_07285
NZ_PCFD01000017.1	Protein Homology	CDS	46340	47248	.	+	0	ID=cds-WP_001829840.1;Parent=gene-CP553_RS07045;Dbxref=GenBank:WP_001829840.1;Name=WP_001829840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500409.1;locus_tag=CP553_RS07045;product=hypothetical protein;protein_id=WP_001829840.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	47428	48264	.	+	.	ID=gene-CP553_RS07050;Name=CP553_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07050;old_locus_tag=CP553_07290
NZ_PCFD01000017.1	Protein Homology	CDS	47428	48264	.	+	0	ID=cds-WP_001829832.1;Parent=gene-CP553_RS07050;Dbxref=GenBank:WP_001829832.1;Name=WP_001829832.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464578.1;locus_tag=CP553_RS07050;product=aldo/keto reductase;protein_id=WP_001829832.1;transl_table=11
NZ_PCFD01000017.1	RefSeq	gene	48549	48704	.	+	.	ID=gene-CP553_RS07055;Name=CP553_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07055
NZ_PCFD01000017.1	GeneMarkS-2+	CDS	48549	48704	.	+	0	ID=cds-WP_001829826.1;Parent=gene-CP553_RS07055;Dbxref=GenBank:WP_001829826.1;Name=WP_001829826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS07055;product=hypothetical protein;protein_id=WP_001829826.1;transl_table=11
##sequence-region NZ_PCFD01000018.1 1 48885
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000018.1	RefSeq	region	1	48885	.	+	.	ID=NZ_PCFD01000018.1:1..48885;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000018.1	RefSeq	gene	1	157	.	+	.	ID=gene-CP553_RS07060;Name=CP553_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07060;old_locus_tag=CP553_07295;partial=true;start_range=.,1
NZ_PCFD01000018.1	Protein Homology	CDS	1	157	.	+	1	ID=cds-WP_142255081.1;Parent=gene-CP553_RS07060;Dbxref=GenBank:WP_142255081.1;Name=WP_142255081.1;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558285.1;locus_tag=CP553_RS07060;partial=true;product=IS3 family transposase;protein_id=WP_142255081.1;start_range=.,1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	740	1507	.	-	.	ID=gene-CP553_RS07065;Name=CP553_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07065;old_locus_tag=CP553_07300
NZ_PCFD01000018.1	Protein Homology	CDS	740	1507	.	-	0	ID=cds-WP_002437663.1;Parent=gene-CP553_RS07065;Dbxref=GenBank:WP_002437663.1;Name=WP_002437663.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502646.1;locus_tag=CP553_RS07065;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_002437663.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	2280	3764	.	-	.	ID=gene-CP553_RS07070;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=CP553_RS07070;old_locus_tag=CP553_07310
NZ_PCFD01000018.1	Protein Homology	CDS	2280	3764	.	-	0	ID=cds-WP_002455958.1;Parent=gene-CP553_RS07070;Dbxref=GenBank:WP_002455958.1;Name=WP_002455958.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490837.1;locus_tag=CP553_RS07070;product=L-lactate dehydrogenase (quinone);protein_id=WP_002455958.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	3963	4943	.	+	.	ID=gene-CP553_RS07075;Name=CP553_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07075;old_locus_tag=CP553_07315
NZ_PCFD01000018.1	Protein Homology	CDS	3963	4943	.	+	0	ID=cds-WP_002437657.1;Parent=gene-CP553_RS07075;Dbxref=GenBank:WP_002437657.1;Name=WP_002437657.1;Ontology_term=GO:0008033,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447550.1;locus_tag=CP553_RS07075;product=tRNA dihydrouridine synthase;protein_id=WP_002437657.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	5261	5620	.	+	.	ID=gene-CP553_RS07080;Name=CP553_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07080;old_locus_tag=CP553_07320
NZ_PCFD01000018.1	Protein Homology	CDS	5261	5620	.	+	0	ID=cds-WP_001830474.1;Parent=gene-CP553_RS07080;Dbxref=GenBank:WP_001830474.1;Name=WP_001830474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499138.1;locus_tag=CP553_RS07080;product=hypothetical protein;protein_id=WP_001830474.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	6160	6570	.	+	.	ID=gene-CP553_RS07085;Name=CP553_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07085;old_locus_tag=CP553_07330
NZ_PCFD01000018.1	Protein Homology	CDS	6160	6570	.	+	0	ID=cds-WP_002437653.1;Parent=gene-CP553_RS07085;Dbxref=GenBank:WP_002437653.1;Name=WP_002437653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489007.1;locus_tag=CP553_RS07085;product=DUF1433 domain-containing protein;protein_id=WP_002437653.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	6815	7000	.	-	.	ID=gene-CP553_RS07090;Name=CP553_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07090;old_locus_tag=CP553_07335
NZ_PCFD01000018.1	Protein Homology	CDS	6815	7000	.	-	0	ID=cds-WP_002437650.1;Parent=gene-CP553_RS07090;Dbxref=GenBank:WP_002437650.1;Name=WP_002437650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467603.1;locus_tag=CP553_RS07090;product=hypothetical protein;protein_id=WP_002437650.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	7312	8214	.	-	.	ID=gene-CP553_RS07095;Name=CP553_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07095;old_locus_tag=CP553_07345
NZ_PCFD01000018.1	Protein Homology	CDS	7312	8214	.	-	0	ID=cds-WP_064659085.1;Parent=gene-CP553_RS07095;Dbxref=GenBank:WP_064659085.1;Name=WP_064659085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477347.1;locus_tag=CP553_RS07095;product=hypothetical protein;protein_id=WP_064659085.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	8600	9184	.	+	.	ID=gene-CP553_RS07100;Name=CP553_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07100;old_locus_tag=CP553_07350
NZ_PCFD01000018.1	Protein Homology	CDS	8600	9184	.	+	0	ID=cds-WP_002437644.1;Parent=gene-CP553_RS07100;Dbxref=GenBank:WP_002437644.1;Name=WP_002437644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489396.1;locus_tag=CP553_RS07100;product=hypothetical protein;protein_id=WP_002437644.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	9448	10260	.	-	.	ID=gene-CP553_RS07105;Name=CP553_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07105;old_locus_tag=CP553_07355
NZ_PCFD01000018.1	Protein Homology	CDS	9448	10260	.	-	0	ID=cds-WP_002437642.1;Parent=gene-CP553_RS07105;Dbxref=GenBank:WP_002437642.1;Name=WP_002437642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500332.1;locus_tag=CP553_RS07105;product=HAD-IIB family hydrolase;protein_id=WP_002437642.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	10625	11512	.	-	.	ID=gene-CP553_RS07110;Name=CP553_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07110;old_locus_tag=CP553_07360
NZ_PCFD01000018.1	Protein Homology	CDS	10625	11512	.	-	0	ID=cds-WP_002455953.1;Parent=gene-CP553_RS07110;Dbxref=GenBank:WP_002455953.1;Name=WP_002455953.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497171.1;locus_tag=CP553_RS07110;product=mechanosensitive ion channel family protein;protein_id=WP_002455953.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	11869	12630	.	-	.	ID=gene-CP553_RS07115;Name=CP553_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07115;old_locus_tag=CP553_07365
NZ_PCFD01000018.1	Protein Homology	CDS	11869	12630	.	-	0	ID=cds-WP_002437638.1;Parent=gene-CP553_RS07115;Dbxref=GenBank:WP_002437638.1;Name=WP_002437638.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487264.1;locus_tag=CP553_RS07115;product=tandem-type lipoprotein;protein_id=WP_002437638.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	12948	13733	.	-	.	ID=gene-CP553_RS07120;Name=CP553_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07120;old_locus_tag=CP553_07370
NZ_PCFD01000018.1	Protein Homology	CDS	12948	13733	.	-	0	ID=cds-WP_002437636.1;Parent=gene-CP553_RS07120;Dbxref=GenBank:WP_002437636.1;Name=WP_002437636.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486114.1;locus_tag=CP553_RS07120;product=tandem-type lipoprotein;protein_id=WP_002437636.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	14086	14214	.	-	.	ID=gene-CP553_RS12910;Name=CP553_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12910;old_locus_tag=CP553_07375
NZ_PCFD01000018.1	Protein Homology	CDS	14086	14214	.	-	0	ID=cds-WP_002437634.1;Parent=gene-CP553_RS12910;Dbxref=GenBank:WP_002437634.1;Name=WP_002437634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830463.1;locus_tag=CP553_RS12910;product=hypothetical protein;protein_id=WP_002437634.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	14228	15112	.	-	.	ID=gene-CP553_RS07125;Name=CP553_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07125;old_locus_tag=CP553_07380
NZ_PCFD01000018.1	Protein Homology	CDS	14228	15112	.	-	0	ID=cds-WP_002455951.1;Parent=gene-CP553_RS07125;Dbxref=GenBank:WP_002455951.1;Name=WP_002455951.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175597.1;locus_tag=CP553_RS07125;product=permease;protein_id=WP_002455951.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	15200	15520	.	-	.	ID=gene-CP553_RS07130;Name=CP553_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07130;old_locus_tag=CP553_07385
NZ_PCFD01000018.1	Protein Homology	CDS	15200	15520	.	-	0	ID=cds-WP_002437630.1;Parent=gene-CP553_RS07130;Dbxref=GenBank:WP_002437630.1;Name=WP_002437630.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449352.1;locus_tag=CP553_RS07130;product=ArsR/SmtB family transcription factor;protein_id=WP_002437630.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	16041	16388	.	+	.	ID=gene-CP553_RS07135;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=protein_coding;locus_tag=CP553_RS07135;old_locus_tag=CP553_07390
NZ_PCFD01000018.1	Protein Homology	CDS	16041	16388	.	+	0	ID=cds-WP_032604339.1;Parent=gene-CP553_RS07135;Dbxref=GenBank:WP_032604339.1;Name=WP_032604339.1;Ontology_term=GO:0046685,GO:0003677;gbkey=CDS;gene=arsD;go_function=DNA binding|0003677||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474929.1;locus_tag=CP553_RS07135;product=arsenite efflux transporter metallochaperone ArsD;protein_id=WP_032604339.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	16375	18099	.	+	.	ID=gene-CP553_RS07140;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=CP553_RS07140;old_locus_tag=CP553_07395
NZ_PCFD01000018.1	Protein Homology	CDS	16375	18099	.	+	0	ID=cds-WP_002494543.1;Parent=gene-CP553_RS07140;Dbxref=GenBank:WP_002494543.1;Name=WP_002494543.1;Ontology_term=GO:0071722,GO:0005524,GO:0015446,GO:0016887;gbkey=CDS;gene=arsA;go_function=ATP binding|0005524||IEA,ATPase-coupled arsenite transmembrane transporter activity|0015446||IEA,ATP hydrolysis activity|0016887||IEA;go_process=detoxification of arsenic-containing substance|0071722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020364781.1;locus_tag=CP553_RS07140;product=arsenical pump-driving ATPase;protein_id=WP_002494543.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	18249	18563	.	+	.	ID=gene-CP553_RS07145;Name=CP553_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07145;old_locus_tag=CP553_07400
NZ_PCFD01000018.1	Protein Homology	CDS	18249	18563	.	+	0	ID=cds-WP_002437624.1;Parent=gene-CP553_RS07145;Dbxref=GenBank:WP_002437624.1;Name=WP_002437624.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509693.1;locus_tag=CP553_RS07145;product=ArsR/SmtB family transcription factor;protein_id=WP_002437624.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	18566	19855	.	+	.	ID=gene-CP553_RS07150;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=CP553_RS07150;old_locus_tag=CP553_07405
NZ_PCFD01000018.1	Protein Homology	CDS	18566	19855	.	+	0	ID=cds-WP_002455949.1;Parent=gene-CP553_RS07150;Dbxref=GenBank:WP_002455949.1;Name=WP_002455949.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274434.1;locus_tag=CP553_RS07150;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_002455949.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	19874	20269	.	+	.	ID=gene-CP553_RS07155;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=CP553_RS07155;old_locus_tag=CP553_07410
NZ_PCFD01000018.1	Protein Homology	CDS	19874	20269	.	+	0	ID=cds-WP_001830465.1;Parent=gene-CP553_RS07155;Dbxref=GenBank:WP_001830465.1;Name=WP_001830465.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;gene=arsC;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500395.1;locus_tag=CP553_RS07155;product=arsenate reductase (thioredoxin);protein_id=WP_001830465.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	20330	21070	.	-	.	ID=gene-CP553_RS07160;Name=CP553_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07160;old_locus_tag=CP553_07415
NZ_PCFD01000018.1	Protein Homology	CDS	20330	21070	.	-	0	ID=cds-WP_002455948.1;Parent=gene-CP553_RS07160;Dbxref=GenBank:WP_002455948.1;Name=WP_002455948.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362831.1;locus_tag=CP553_RS07160;product=sulfite exporter TauE/SafE family protein;protein_id=WP_002455948.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	21085	21345	.	-	.	ID=gene-CP553_RS07165;Name=cstR;gbkey=Gene;gene=cstR;gene_biotype=protein_coding;locus_tag=CP553_RS07165;old_locus_tag=CP553_07420
NZ_PCFD01000018.1	Protein Homology	CDS	21085	21345	.	-	0	ID=cds-WP_000456194.1;Parent=gene-CP553_RS07165;Dbxref=GenBank:WP_000456194.1;Name=WP_000456194.1;gbkey=CDS;gene=cstR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498640.1;locus_tag=CP553_RS07165;product=persulfide-sensing transcriptional repressor CstR;protein_id=WP_000456194.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	21484	22554	.	+	.	ID=gene-CP553_RS07170;Name=CP553_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07170;old_locus_tag=CP553_07425
NZ_PCFD01000018.1	Protein Homology	CDS	21484	22554	.	+	0	ID=cds-WP_001830526.1;Parent=gene-CP553_RS07170;Dbxref=GenBank:WP_001830526.1;Name=WP_001830526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019236144.1;locus_tag=CP553_RS07170;product=DsrE/DsrF/DrsH-like family protein;protein_id=WP_001830526.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	22573	23901	.	+	.	ID=gene-CP553_RS07175;Name=cstB;gbkey=Gene;gene=cstB;gene_biotype=protein_coding;locus_tag=CP553_RS07175;old_locus_tag=CP553_07430
NZ_PCFD01000018.1	Protein Homology	CDS	22573	23901	.	+	0	ID=cds-WP_002485357.1;Parent=gene-CP553_RS07175;Dbxref=GenBank:WP_002485357.1;Name=WP_002485357.1;gbkey=CDS;gene=cstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488497.1;locus_tag=CP553_RS07175;product=persulfide dioxygenase-sulfurtransferase CstB;protein_id=WP_002485357.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	24373	24855	.	-	.	ID=gene-CP553_RS07180;Name=CP553_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07180;old_locus_tag=CP553_07435
NZ_PCFD01000018.1	Protein Homology	CDS	24373	24855	.	-	0	ID=cds-WP_001830525.1;Parent=gene-CP553_RS07180;Dbxref=GenBank:WP_001830525.1;Name=WP_001830525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494540.1;locus_tag=CP553_RS07180;product=YdhK family protein;protein_id=WP_001830525.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	24875	26308	.	-	.	ID=gene-CP553_RS07185;Name=CP553_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07185;old_locus_tag=CP553_07440
NZ_PCFD01000018.1	Protein Homology	CDS	24875	26308	.	-	0	ID=cds-WP_002437604.1;Parent=gene-CP553_RS07185;Dbxref=GenBank:WP_002437604.1;Name=WP_002437604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503776.1;locus_tag=CP553_RS07185;product=multicopper oxidase family protein;protein_id=WP_002437604.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	26323	28386	.	-	.	ID=gene-CP553_RS07190;Name=CP553_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07190;old_locus_tag=CP553_07445
NZ_PCFD01000018.1	Protein Homology	CDS	26323	28386	.	-	0	ID=cds-WP_002437601.1;Parent=gene-CP553_RS07190;Dbxref=GenBank:WP_002437601.1;Name=WP_002437601.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449344.1;locus_tag=CP553_RS07190;product=heavy metal translocating P-type ATPase;protein_id=WP_002437601.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	28809	29294	.	-	.	ID=gene-CP553_RS07195;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=CP553_RS07195;old_locus_tag=CP553_07450
NZ_PCFD01000018.1	Protein Homology	CDS	28809	29294	.	-	0	ID=cds-WP_002455937.1;Parent=gene-CP553_RS07195;Dbxref=GenBank:WP_002455937.1;Name=WP_002455937.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455937.1;locus_tag=CP553_RS07195;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_002455937.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	29840	31201	.	-	.	ID=gene-CP553_RS07200;Name=CP553_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07200;old_locus_tag=CP553_07460
NZ_PCFD01000018.1	Protein Homology	CDS	29840	31201	.	-	0	ID=cds-WP_001830488.1;Parent=gene-CP553_RS07200;Dbxref=GenBank:WP_001830488.1;Name=WP_001830488.1;Ontology_term=GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469141.1;locus_tag=CP553_RS07200;product=SLC45 family MFS transporter;protein_id=WP_001830488.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	32125	33216	.	-	.	ID=gene-CP553_RS07205;Name=CP553_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07205;old_locus_tag=CP553_07470
NZ_PCFD01000018.1	Protein Homology	CDS	32125	33216	.	-	0	ID=cds-WP_002455936.1;Parent=gene-CP553_RS07205;Dbxref=GenBank:WP_002455936.1;Name=WP_002455936.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830496.1;locus_tag=CP553_RS07205;product=sensor histidine kinase;protein_id=WP_002455936.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	33204	33869	.	-	.	ID=gene-CP553_RS07210;Name=CP553_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07210;old_locus_tag=CP553_07475
NZ_PCFD01000018.1	Protein Homology	CDS	33204	33869	.	-	0	ID=cds-WP_002455935.1;Parent=gene-CP553_RS07210;Dbxref=GenBank:WP_002455935.1;Name=WP_002455935.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455935.1;locus_tag=CP553_RS07210;product=response regulator transcription factor;protein_id=WP_002455935.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	33950	34561	.	-	.	ID=gene-CP553_RS07215;Name=CP553_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07215;old_locus_tag=CP553_07480
NZ_PCFD01000018.1	Protein Homology	CDS	33950	34561	.	-	0	ID=cds-WP_001830486.1;Parent=gene-CP553_RS07215;Dbxref=GenBank:WP_001830486.1;Name=WP_001830486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494536.1;locus_tag=CP553_RS07215;product=hypothetical protein;protein_id=WP_001830486.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	34527	35648	.	-	.	ID=gene-CP553_RS07220;Name=CP553_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07220;old_locus_tag=CP553_07485
NZ_PCFD01000018.1	Protein Homology	CDS	34527	35648	.	-	0	ID=cds-WP_002437591.1;Parent=gene-CP553_RS07220;Dbxref=GenBank:WP_002437591.1;Name=WP_002437591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470727.1;locus_tag=CP553_RS07220;product=ABC transporter permease;protein_id=WP_002437591.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	35623	36528	.	-	.	ID=gene-CP553_RS07225;Name=CP553_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07225;old_locus_tag=CP553_07490
NZ_PCFD01000018.1	Protein Homology	CDS	35623	36528	.	-	0	ID=cds-WP_002437590.1;Parent=gene-CP553_RS07225;Dbxref=GenBank:WP_002437590.1;Name=WP_002437590.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0140657;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489406.1;locus_tag=CP553_RS07225;product=ABC transporter ATP-binding protein;protein_id=WP_002437590.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	36689	36826	.	+	.	ID=gene-CP553_RS07230;Name=CP553_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07230;old_locus_tag=CP553_07495
NZ_PCFD01000018.1	Protein Homology	CDS	36689	36826	.	+	0	ID=cds-WP_002437588.1;Parent=gene-CP553_RS07230;Dbxref=GenBank:WP_002437588.1;Name=WP_002437588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437588.1;locus_tag=CP553_RS07230;product=hypothetical protein;protein_id=WP_002437588.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	36839	37234	.	+	.	ID=gene-CP553_RS07235;Name=CP553_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07235;old_locus_tag=CP553_07500
NZ_PCFD01000018.1	Protein Homology	CDS	36839	37234	.	+	0	ID=cds-WP_002437584.1;Parent=gene-CP553_RS07235;Dbxref=GenBank:WP_002437584.1;Name=WP_002437584.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437584.1;locus_tag=CP553_RS07235;product=radical SAM protein;protein_id=WP_002437584.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	37495	38268	.	-	.	ID=gene-CP553_RS07240;Name=CP553_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07240;old_locus_tag=CP553_07505
NZ_PCFD01000018.1	Protein Homology	CDS	37495	38268	.	-	0	ID=cds-WP_002505142.1;Parent=gene-CP553_RS07240;Dbxref=GenBank:WP_002505142.1;Name=WP_002505142.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499155.1;locus_tag=CP553_RS07240;product=tandem-type lipoprotein;protein_id=WP_002505142.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	38688	39362	.	-	.	ID=gene-CP553_RS07245;Name=CP553_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07245;old_locus_tag=CP553_07510
NZ_PCFD01000018.1	Protein Homology	CDS	38688	39362	.	-	0	ID=cds-WP_116842998.1;Parent=gene-CP553_RS07245;Dbxref=GenBank:WP_116842998.1;Name=WP_116842998.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS07245;product=IS6 family transposase;protein_id=WP_116842998.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	39378	39704	.	+	.	ID=gene-CP553_RS07250;Name=CP553_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07250;old_locus_tag=CP553_07515
NZ_PCFD01000018.1	Protein Homology	CDS	39378	39704	.	+	0	ID=cds-WP_000916431.1;Parent=gene-CP553_RS07250;Dbxref=GenBank:WP_000916431.1;Name=WP_000916431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916431.1;locus_tag=CP553_RS07250;product=hypothetical protein;protein_id=WP_000916431.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	40586	41017	.	+	.	ID=gene-CP553_RS07255;Name=CP553_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07255;old_locus_tag=CP553_07520
NZ_PCFD01000018.1	Protein Homology	CDS	40586	41017	.	+	0	ID=cds-WP_000475804.1;Parent=gene-CP553_RS07255;Dbxref=GenBank:WP_000475804.1;Name=WP_000475804.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475805.1;locus_tag=CP553_RS07255;product=universal stress protein;protein_id=WP_000475804.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	pseudogene	41288	41970	.	-	.	ID=gene-CP553_RS12810;Name=CP553_RS12810;end_range=41970,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12810;partial=true;pseudo=true
NZ_PCFD01000018.1	Protein Homology	CDS	41288	41970	.	-	0	ID=cds-CP553_RS12810;Parent=gene-CP553_RS12810;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=41970,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505894.1;locus_tag=CP553_RS12810;partial=true;product=type I restriction enzyme endonuclease domain-containing protein;pseudo=true;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	42456	42902	.	+	.	ID=gene-CP553_RS07270;Name=CP553_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07270;old_locus_tag=CP553_07535
NZ_PCFD01000018.1	Protein Homology	CDS	42456	42902	.	+	0	ID=cds-WP_000711815.1;Parent=gene-CP553_RS07270;Dbxref=GenBank:WP_000711815.1;Name=WP_000711815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711814.1;locus_tag=CP553_RS07270;product=arginine repressor;protein_id=WP_000711815.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	43171	44406	.	+	.	ID=gene-CP553_RS07275;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=CP553_RS07275;old_locus_tag=CP553_07540
NZ_PCFD01000018.1	Protein Homology	CDS	43171	44406	.	+	0	ID=cds-WP_000249804.1;Parent=gene-CP553_RS07275;Dbxref=GenBank:WP_000249804.1;Name=WP_000249804.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501419.1;locus_tag=CP553_RS07275;product=arginine deiminase;protein_id=WP_000249804.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	44492	45913	.	+	.	ID=gene-CP553_RS07280;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=CP553_RS07280;old_locus_tag=CP553_07545
NZ_PCFD01000018.1	Protein Homology	CDS	44492	45913	.	+	0	ID=cds-WP_000344142.1;Parent=gene-CP553_RS07280;Dbxref=GenBank:WP_000344142.1;Name=WP_000344142.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344142.1;locus_tag=CP553_RS07280;product=arginine-ornithine antiporter;protein_id=WP_000344142.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	45955	46644	.	+	.	ID=gene-CP553_RS07285;Name=CP553_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07285;old_locus_tag=CP553_07550
NZ_PCFD01000018.1	Protein Homology	CDS	45955	46644	.	+	0	ID=cds-WP_000272781.1;Parent=gene-CP553_RS07285;Dbxref=GenBank:WP_000272781.1;Name=WP_000272781.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485352.1;locus_tag=CP553_RS07285;product=Crp/Fnr family transcriptional regulator;protein_id=WP_000272781.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	46682	47680	.	+	.	ID=gene-CP553_RS07290;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=CP553_RS07290;old_locus_tag=CP553_07555
NZ_PCFD01000018.1	Protein Homology	CDS	46682	47680	.	+	0	ID=cds-WP_000793596.1;Parent=gene-CP553_RS07290;Dbxref=GenBank:WP_000793596.1;Name=WP_000793596.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452600.1;locus_tag=CP553_RS07290;product=ornithine carbamoyltransferase;protein_id=WP_000793596.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	47700	48629	.	+	.	ID=gene-CP553_RS07295;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=CP553_RS07295;old_locus_tag=CP553_07560
NZ_PCFD01000018.1	Protein Homology	CDS	47700	48629	.	+	0	ID=cds-WP_000036756.1;Parent=gene-CP553_RS07295;Dbxref=GenBank:WP_000036756.1;Name=WP_000036756.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498813.1;locus_tag=CP553_RS07295;product=carbamate kinase;protein_id=WP_000036756.1;transl_table=11
NZ_PCFD01000018.1	RefSeq	gene	48729	48885	.	-	.	ID=gene-CP553_RS07300;Name=CP553_RS07300;end_range=48885,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07300;old_locus_tag=CP553_07565;partial=true
NZ_PCFD01000018.1	Protein Homology	CDS	48729	48885	.	-	1	ID=cds-WP_331461750.1;Parent=gene-CP553_RS07300;Dbxref=GenBank:WP_331461750.1;Name=WP_331461750.1;Ontology_term=GO:0015074;end_range=48885,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558285.1;locus_tag=CP553_RS07300;partial=true;product=IS3 family transposase;protein_id=WP_331461750.1;transl_table=11
##sequence-region NZ_PCFD01000019.1 1 46896
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000019.1	RefSeq	region	1	46896	.	+	.	ID=NZ_PCFD01000019.1:1..46896;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000019.1	RefSeq	gene	521	1252	.	+	.	ID=gene-CP553_RS07305;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=CP553_RS07305;old_locus_tag=CP553_07570
NZ_PCFD01000019.1	Protein Homology	CDS	521	1252	.	+	0	ID=cds-WP_001831296.1;Parent=gene-CP553_RS07305;Dbxref=GenBank:WP_001831296.1;Name=WP_001831296.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476870.1;locus_tag=CP553_RS07305;product=5-oxoprolinase subunit PxpB;protein_id=WP_001831296.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	1242	2246	.	+	.	ID=gene-CP553_RS07310;Name=CP553_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07310;old_locus_tag=CP553_07575
NZ_PCFD01000019.1	Protein Homology	CDS	1242	2246	.	+	0	ID=cds-WP_001832780.1;Parent=gene-CP553_RS07310;Dbxref=GenBank:WP_001832780.1;Name=WP_001832780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475152.1;locus_tag=CP553_RS07310;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_001832780.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	2247	2687	.	+	.	ID=gene-CP553_RS07315;Name=CP553_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07315;old_locus_tag=CP553_07580
NZ_PCFD01000019.1	Protein Homology	CDS	2247	2687	.	+	0	ID=cds-WP_001832766.1;Parent=gene-CP553_RS07315;Dbxref=GenBank:WP_001832766.1;Name=WP_001832766.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473639.1;locus_tag=CP553_RS07315;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_001832766.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	2701	4059	.	+	.	ID=gene-CP553_RS07320;Name=CP553_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07320;old_locus_tag=CP553_07585
NZ_PCFD01000019.1	Protein Homology	CDS	2701	4059	.	+	0	ID=cds-WP_002494471.1;Parent=gene-CP553_RS07320;Dbxref=GenBank:WP_002494471.1;Name=WP_002494471.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446591.1;locus_tag=CP553_RS07320;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002494471.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	4062	4814	.	+	.	ID=gene-CP553_RS07325;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=CP553_RS07325;old_locus_tag=CP553_07590
NZ_PCFD01000019.1	Protein Homology	CDS	4062	4814	.	+	0	ID=cds-WP_001830928.1;Parent=gene-CP553_RS07325;Dbxref=GenBank:WP_001830928.1;Name=WP_001830928.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275612.1;locus_tag=CP553_RS07325;product=5-oxoprolinase subunit PxpA;protein_id=WP_001830928.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	4826	6070	.	+	.	ID=gene-CP553_RS07330;Name=CP553_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07330;old_locus_tag=CP553_07595
NZ_PCFD01000019.1	Protein Homology	CDS	4826	6070	.	+	0	ID=cds-WP_002440121.1;Parent=gene-CP553_RS07330;Dbxref=GenBank:WP_002440121.1;Name=WP_002440121.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473567.1;locus_tag=CP553_RS07330;product=NRAMP family divalent metal transporter;protein_id=WP_002440121.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	6269	6955	.	+	.	ID=gene-CP553_RS07335;Name=CP553_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07335;old_locus_tag=CP553_07600
NZ_PCFD01000019.1	Protein Homology	CDS	6269	6955	.	+	0	ID=cds-WP_002440119.1;Parent=gene-CP553_RS07335;Dbxref=GenBank:WP_002440119.1;Name=WP_002440119.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831322.1;locus_tag=CP553_RS07335;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_002440119.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	6999	7502	.	+	.	ID=gene-CP553_RS07340;Name=CP553_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07340;old_locus_tag=CP553_07605
NZ_PCFD01000019.1	Protein Homology	CDS	6999	7502	.	+	0	ID=cds-WP_153647389.1;Parent=gene-CP553_RS07340;Dbxref=GenBank:WP_153647389.1;Name=WP_153647389.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500211.1;locus_tag=CP553_RS07340;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_153647389.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	7503	8603	.	+	.	ID=gene-CP553_RS07345;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=CP553_RS07345;old_locus_tag=CP553_07610
NZ_PCFD01000019.1	Protein Homology	CDS	7503	8603	.	+	0	ID=cds-WP_001832784.1;Parent=gene-CP553_RS07345;Dbxref=GenBank:WP_001832784.1;Name=WP_001832784.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500210.1;locus_tag=CP553_RS07345;product=ribosome biogenesis GTPase YqeH;protein_id=WP_001832784.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	8619	9428	.	+	.	ID=gene-CP553_RS07350;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=CP553_RS07350;old_locus_tag=CP553_07615
NZ_PCFD01000019.1	Protein Homology	CDS	8619	9428	.	+	0	ID=cds-WP_001831091.1;Parent=gene-CP553_RS07350;Dbxref=GenBank:WP_001831091.1;Name=WP_001831091.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468439.1;locus_tag=CP553_RS07350;product=shikimate dehydrogenase;protein_id=WP_001831091.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	9428	9721	.	+	.	ID=gene-CP553_RS07355;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=CP553_RS07355;old_locus_tag=CP553_07620
NZ_PCFD01000019.1	Protein Homology	CDS	9428	9721	.	+	0	ID=cds-WP_001830956.1;Parent=gene-CP553_RS07355;Dbxref=GenBank:WP_001830956.1;Name=WP_001830956.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830956.1;locus_tag=CP553_RS07355;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001830956.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	9718	10293	.	+	.	ID=gene-CP553_RS07360;Name=CP553_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07360;old_locus_tag=CP553_07625
NZ_PCFD01000019.1	Protein Homology	CDS	9718	10293	.	+	0	ID=cds-WP_001831250.1;Parent=gene-CP553_RS07360;Dbxref=GenBank:WP_001831250.1;Name=WP_001831250.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495045.1;locus_tag=CP553_RS07360;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001831250.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	10280	10864	.	+	.	ID=gene-CP553_RS07365;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=CP553_RS07365;old_locus_tag=CP553_07630
NZ_PCFD01000019.1	Protein Homology	CDS	10280	10864	.	+	0	ID=cds-WP_001831144.1;Parent=gene-CP553_RS07365;Dbxref=GenBank:WP_001831144.1;Name=WP_001831144.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500206.1;locus_tag=CP553_RS07365;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_001831144.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	10865	11218	.	+	.	ID=gene-CP553_RS07370;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=CP553_RS07370;old_locus_tag=CP553_07635
NZ_PCFD01000019.1	Protein Homology	CDS	10865	11218	.	+	0	ID=cds-WP_001831075.1;Parent=gene-CP553_RS07370;Dbxref=GenBank:WP_001831075.1;Name=WP_001831075.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500205.1;locus_tag=CP553_RS07370;product=ribosome silencing factor;protein_id=WP_001831075.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	11221	11940	.	+	.	ID=gene-CP553_RS07375;Name=CP553_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07375;old_locus_tag=CP553_07640
NZ_PCFD01000019.1	Protein Homology	CDS	11221	11940	.	+	0	ID=cds-WP_002440107.1;Parent=gene-CP553_RS07375;Dbxref=GenBank:WP_002440107.1;Name=WP_002440107.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502368.1;locus_tag=CP553_RS07375;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_002440107.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	11999	12673	.	+	.	ID=gene-CP553_RS07380;Name=CP553_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07380;old_locus_tag=CP553_07645
NZ_PCFD01000019.1	Protein Homology	CDS	11999	12673	.	+	0	ID=cds-WP_002440106.1;Parent=gene-CP553_RS07380;Dbxref=GenBank:WP_002440106.1;Name=WP_002440106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495043.1;locus_tag=CP553_RS07380;product=helix-hairpin-helix domain-containing protein;protein_id=WP_002440106.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	12753	13214	.	+	.	ID=gene-CP553_RS07385;Name=CP553_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07385;old_locus_tag=CP553_07650
NZ_PCFD01000019.1	Protein Homology	CDS	12753	13214	.	+	0	ID=cds-WP_002440103.1;Parent=gene-CP553_RS07385;Dbxref=GenBank:WP_002440103.1;Name=WP_002440103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446577.1;locus_tag=CP553_RS07385;product=ComE operon protein 2;protein_id=WP_002440103.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	13218	15434	.	+	.	ID=gene-CP553_RS07390;Name=CP553_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07390;old_locus_tag=CP553_07655
NZ_PCFD01000019.1	Protein Homology	CDS	13218	15434	.	+	0	ID=cds-WP_002440101.1;Parent=gene-CP553_RS07390;Dbxref=GenBank:WP_002440101.1;Name=WP_002440101.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468789.1;locus_tag=CP553_RS07390;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_002440101.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	15479	16453	.	+	.	ID=gene-CP553_RS07395;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=CP553_RS07395;old_locus_tag=CP553_07660
NZ_PCFD01000019.1	Protein Homology	CDS	15479	16453	.	+	0	ID=cds-WP_001831125.1;Parent=gene-CP553_RS07395;Dbxref=GenBank:WP_001831125.1;Name=WP_001831125.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500200.1;locus_tag=CP553_RS07395;product=DNA polymerase III subunit delta;protein_id=WP_001831125.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	16571	16822	.	-	.	ID=gene-CP553_RS07400;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=CP553_RS07400;old_locus_tag=CP553_07665
NZ_PCFD01000019.1	Protein Homology	CDS	16571	16822	.	-	0	ID=cds-WP_001831221.1;Parent=gene-CP553_RS07400;Dbxref=GenBank:WP_001831221.1;Name=WP_001831221.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500199.1;locus_tag=CP553_RS07400;product=30S ribosomal protein S20;protein_id=WP_001831221.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	17115	18938	.	+	.	ID=gene-CP553_RS07405;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=CP553_RS07405;old_locus_tag=CP553_07670
NZ_PCFD01000019.1	Protein Homology	CDS	17115	18938	.	+	0	ID=cds-WP_001831284.1;Parent=gene-CP553_RS07405;Dbxref=GenBank:WP_001831284.1;Name=WP_001831284.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471033.1;locus_tag=CP553_RS07405;product=translation elongation factor 4;protein_id=WP_001831284.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	19057	20181	.	+	.	ID=gene-CP553_RS07410;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=CP553_RS07410;old_locus_tag=CP553_07675
NZ_PCFD01000019.1	Protein Homology	CDS	19057	20181	.	+	0	ID=cds-WP_001831094.1;Parent=gene-CP553_RS07410;Dbxref=GenBank:WP_001831094.1;Name=WP_001831094.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470621.1;locus_tag=CP553_RS07410;product=radical SAM family heme chaperone HemW;protein_id=WP_001831094.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	20281	21258	.	+	.	ID=gene-CP553_RS07415;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=CP553_RS07415;old_locus_tag=CP553_07680
NZ_PCFD01000019.1	Protein Homology	CDS	20281	21258	.	+	0	ID=cds-WP_001831038.1;Parent=gene-CP553_RS07415;Dbxref=GenBank:WP_001831038.1;Name=WP_001831038.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457749.1;locus_tag=CP553_RS07415;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_001831038.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	21287	21919	.	+	.	ID=gene-CP553_RS07420;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=CP553_RS07420;old_locus_tag=CP553_07685
NZ_PCFD01000019.1	Protein Homology	CDS	21287	21919	.	+	0	ID=cds-WP_001831117.1;Parent=gene-CP553_RS07420;Dbxref=GenBank:WP_001831117.1;Name=WP_001831117.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831117.1;locus_tag=CP553_RS07420;product=nucleotide exchange factor GrpE;protein_id=WP_001831117.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	21975	23804	.	+	.	ID=gene-CP553_RS07425;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=CP553_RS07425;old_locus_tag=CP553_07690
NZ_PCFD01000019.1	Protein Homology	CDS	21975	23804	.	+	0	ID=cds-WP_116842999.1;Parent=gene-CP553_RS07425;Dbxref=GenBank:WP_116842999.1;Name=WP_116842999.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503178.1;locus_tag=CP553_RS07425;product=molecular chaperone DnaK;protein_id=WP_116842999.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	23949	25070	.	+	.	ID=gene-CP553_RS07430;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=CP553_RS07430;old_locus_tag=CP553_07695
NZ_PCFD01000019.1	Protein Homology	CDS	23949	25070	.	+	0	ID=cds-WP_001830934.1;Parent=gene-CP553_RS07430;Dbxref=GenBank:WP_001830934.1;Name=WP_001830934.1;Ontology_term=GO:0006457,GO:0009408,GO:0005524,GO:0031072,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=ATP binding|0005524||IEA,heat shock protein binding|0031072||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500192.1;locus_tag=CP553_RS07430;product=molecular chaperone DnaJ;protein_id=WP_001830934.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	25074	26012	.	+	.	ID=gene-CP553_RS07435;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=CP553_RS07435;old_locus_tag=CP553_07700
NZ_PCFD01000019.1	Protein Homology	CDS	25074	26012	.	+	0	ID=cds-WP_002440090.1;Parent=gene-CP553_RS07435;Dbxref=GenBank:WP_002440090.1;Name=WP_002440090.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831256.1;locus_tag=CP553_RS07435;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_002440090.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	26014	26766	.	+	.	ID=gene-CP553_RS07440;Name=CP553_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07440;old_locus_tag=CP553_07705
NZ_PCFD01000019.1	Protein Homology	CDS	26014	26766	.	+	0	ID=cds-WP_002456176.1;Parent=gene-CP553_RS07440;Dbxref=GenBank:WP_002456176.1;Name=WP_002456176.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493561.1;locus_tag=CP553_RS07440;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_002456176.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	26772	28118	.	+	.	ID=gene-CP553_RS07445;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=CP553_RS07445;old_locus_tag=CP553_07710
NZ_PCFD01000019.1	Protein Homology	CDS	26772	28118	.	+	0	ID=cds-WP_001831098.1;Parent=gene-CP553_RS07445;Dbxref=GenBank:WP_001831098.1;Name=WP_001831098.1;Ontology_term=GO:0006400,GO:0035598,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity|0035598||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500189.1;locus_tag=CP553_RS07445;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_001831098.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	28244	28420	.	+	.	ID=gene-CP553_RS07450;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=CP553_RS07450;old_locus_tag=CP553_07715
NZ_PCFD01000019.1	Protein Homology	CDS	28244	28420	.	+	0	ID=cds-WP_000048060.1;Parent=gene-CP553_RS07450;Dbxref=GenBank:WP_000048060.1;Name=WP_000048060.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998564.1;locus_tag=CP553_RS07450;product=30S ribosomal protein S21;protein_id=WP_000048060.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	29265	29975	.	+	.	ID=gene-CP553_RS07455;Name=CP553_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07455;old_locus_tag=CP553_07720
NZ_PCFD01000019.1	Protein Homology	CDS	29265	29975	.	+	0	ID=cds-WP_001831053.1;Parent=gene-CP553_RS07455;Dbxref=GenBank:WP_001831053.1;Name=WP_001831053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369639.1;locus_tag=CP553_RS07455;product=NfeD family protein;protein_id=WP_001831053.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	29990	30979	.	+	.	ID=gene-CP553_RS07460;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=CP553_RS07460;old_locus_tag=CP553_07725
NZ_PCFD01000019.1	Protein Homology	CDS	29990	30979	.	+	0	ID=cds-WP_001830989.1;Parent=gene-CP553_RS07460;Dbxref=GenBank:WP_001830989.1;Name=WP_001830989.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830989.1;locus_tag=CP553_RS07460;product=flotillin-like protein FloA;protein_id=WP_001830989.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	30995	31678	.	+	.	ID=gene-CP553_RS07465;Name=CP553_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07465;old_locus_tag=CP553_07730
NZ_PCFD01000019.1	Protein Homology	CDS	30995	31678	.	+	0	ID=cds-WP_002440084.1;Parent=gene-CP553_RS07465;Dbxref=GenBank:WP_002440084.1;Name=WP_002440084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503175.1;locus_tag=CP553_RS07465;product=hypothetical protein;protein_id=WP_002440084.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	31964	32911	.	+	.	ID=gene-CP553_RS07470;Name=CP553_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07470;old_locus_tag=CP553_07735
NZ_PCFD01000019.1	Protein Homology	CDS	31964	32911	.	+	0	ID=cds-WP_001831049.1;Parent=gene-CP553_RS07470;Dbxref=GenBank:WP_001831049.1;Name=WP_001831049.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831049.1;locus_tag=CP553_RS07470;product=PhoH family protein;protein_id=WP_001831049.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	32912	33379	.	+	.	ID=gene-CP553_RS07475;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=CP553_RS07475;old_locus_tag=CP553_07740
NZ_PCFD01000019.1	Protein Homology	CDS	32912	33379	.	+	0	ID=cds-WP_001831142.1;Parent=gene-CP553_RS07475;Dbxref=GenBank:WP_001831142.1;Name=WP_001831142.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500183.1;locus_tag=CP553_RS07475;product=rRNA maturation RNase YbeY;protein_id=WP_001831142.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	33381	33737	.	+	.	ID=gene-CP553_RS07480;Name=CP553_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07480;old_locus_tag=CP553_07745
NZ_PCFD01000019.1	Protein Homology	CDS	33381	33737	.	+	0	ID=cds-WP_002440082.1;Parent=gene-CP553_RS07480;Dbxref=GenBank:WP_002440082.1;Name=WP_002440082.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476850.1;locus_tag=CP553_RS07480;product=diacylglycerol kinase family protein;protein_id=WP_002440082.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	33737	34141	.	+	.	ID=gene-CP553_RS07485;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=CP553_RS07485;old_locus_tag=CP553_07750
NZ_PCFD01000019.1	Protein Homology	CDS	33737	34141	.	+	0	ID=cds-WP_001830967.1;Parent=gene-CP553_RS07485;Dbxref=GenBank:WP_001830967.1;Name=WP_001830967.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270,GO:0005737;gbkey=CDS;gene=cdd;go_component=cytoplasm|0005737||IEA;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501020.1;locus_tag=CP553_RS07485;product=cytidine deaminase;protein_id=WP_001830967.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	34141	35040	.	+	.	ID=gene-CP553_RS07490;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=CP553_RS07490;old_locus_tag=CP553_07755
NZ_PCFD01000019.1	Protein Homology	CDS	34141	35040	.	+	0	ID=cds-WP_116843000.1;Parent=gene-CP553_RS07490;Dbxref=GenBank:WP_116843000.1;Name=WP_116843000.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134760.1;locus_tag=CP553_RS07490;product=GTPase Era;protein_id=WP_116843000.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	35066	35827	.	+	.	ID=gene-CP553_RS07495;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=CP553_RS07495;old_locus_tag=CP553_07760
NZ_PCFD01000019.1	Protein Homology	CDS	35066	35827	.	+	0	ID=cds-WP_116843001.1;Parent=gene-CP553_RS07495;Dbxref=GenBank:WP_116843001.1;Name=WP_116843001.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496890.1;locus_tag=CP553_RS07495;product=DNA repair protein RecO;protein_id=WP_116843001.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	35957	37348	.	-	.	ID=gene-CP553_RS07500;Name=CP553_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07500;old_locus_tag=CP553_07765
NZ_PCFD01000019.1	Protein Homology	CDS	35957	37348	.	-	0	ID=cds-WP_002440079.1;Parent=gene-CP553_RS07500;Dbxref=GenBank:WP_002440079.1;Name=WP_002440079.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500177.1;locus_tag=CP553_RS07500;product=glycine--tRNA ligase;protein_id=WP_002440079.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	37684	38307	.	+	.	ID=gene-CP553_RS07505;Name=CP553_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07505;old_locus_tag=CP553_07770
NZ_PCFD01000019.1	Protein Homology	CDS	37684	38307	.	+	0	ID=cds-WP_010959185.1;Parent=gene-CP553_RS07505;Dbxref=GenBank:WP_010959185.1;Name=WP_010959185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001797828.1;locus_tag=CP553_RS07505;product=helix-turn-helix transcriptional regulator;protein_id=WP_010959185.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	38319	39137	.	+	.	ID=gene-CP553_RS07510;Name=CP553_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07510;old_locus_tag=CP553_07775
NZ_PCFD01000019.1	Protein Homology	CDS	38319	39137	.	+	0	ID=cds-WP_001831146.1;Parent=gene-CP553_RS07510;Dbxref=GenBank:WP_001831146.1;Name=WP_001831146.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500175.1;locus_tag=CP553_RS07510;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_001831146.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	39311	41107	.	+	.	ID=gene-CP553_RS07515;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=CP553_RS07515;old_locus_tag=CP553_07780
NZ_PCFD01000019.1	Protein Homology	CDS	39311	41107	.	+	0	ID=cds-WP_001831005.1;Parent=gene-CP553_RS07515;Dbxref=GenBank:WP_001831005.1;Name=WP_001831005.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501017.1;locus_tag=CP553_RS07515;product=DNA primase;protein_id=WP_001831005.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	41378	42484	.	+	.	ID=gene-CP553_RS07520;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=CP553_RS07520;old_locus_tag=CP553_07785
NZ_PCFD01000019.1	Protein Homology	CDS	41378	42484	.	+	0	ID=cds-WP_002440071.1;Parent=gene-CP553_RS07520;Dbxref=GenBank:WP_002440071.1;Name=WP_002440071.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275651.1;locus_tag=CP553_RS07520;product=RNA polymerase sigma factor RpoD;protein_id=WP_002440071.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	42639	43328	.	+	.	ID=gene-CP553_RS07525;Name=CP553_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07525;old_locus_tag=CP553_07790
NZ_PCFD01000019.1	Protein Homology	CDS	42639	43328	.	+	0	ID=cds-WP_002440069.1;Parent=gene-CP553_RS07525;Dbxref=GenBank:WP_002440069.1;Name=WP_002440069.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446546.1;locus_tag=CP553_RS07525;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_002440069.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	43318	44418	.	+	.	ID=gene-CP553_RS07530;Name=CP553_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07530;old_locus_tag=CP553_07795
NZ_PCFD01000019.1	Protein Homology	CDS	43318	44418	.	+	0	ID=cds-WP_002440066.1;Parent=gene-CP553_RS07530;Dbxref=GenBank:WP_002440066.1;Name=WP_002440066.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476844.1;locus_tag=CP553_RS07530;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_002440066.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	44453	45799	.	+	.	ID=gene-CP553_RS07535;Name=CP553_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07535;old_locus_tag=CP553_07800
NZ_PCFD01000019.1	Protein Homology	CDS	44453	45799	.	+	0	ID=cds-WP_001832762.1;Parent=gene-CP553_RS07535;Dbxref=GenBank:WP_001832762.1;Name=WP_001832762.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464655.1;locus_tag=CP553_RS07535;product=DEAD/DEAH box helicase;protein_id=WP_001832762.1;transl_table=11
NZ_PCFD01000019.1	RefSeq	gene	45809	46699	.	+	.	ID=gene-CP553_RS07540;Name=CP553_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07540;old_locus_tag=CP553_07805
NZ_PCFD01000019.1	Protein Homology	CDS	45809	46699	.	+	0	ID=cds-WP_002440064.1;Parent=gene-CP553_RS07540;Dbxref=GenBank:WP_002440064.1;Name=WP_002440064.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500169.1;locus_tag=CP553_RS07540;product=deoxyribonuclease IV;protein_id=WP_002440064.1;transl_table=11
##sequence-region NZ_PCFD01000020.1 1 44858
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000020.1	RefSeq	region	1	44858	.	+	.	ID=NZ_PCFD01000020.1:1..44858;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000020.1	RefSeq	gene	13	2118	.	+	.	ID=gene-CP553_RS07545;Name=rsp;gbkey=Gene;gene=rsp;gene_biotype=protein_coding;locus_tag=CP553_RS07545;old_locus_tag=CP553_07810
NZ_PCFD01000020.1	Protein Homology	CDS	13	2118	.	+	0	ID=cds-WP_002438342.1;Parent=gene-CP553_RS07545;Dbxref=GenBank:WP_002438342.1;Name=WP_002438342.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=rsp;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366872.1;locus_tag=CP553_RS07545;product=AraC family transcriptional regulator Rsp;protein_id=WP_002438342.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	2191	2613	.	+	.	ID=gene-CP553_RS07550;Name=CP553_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07550;old_locus_tag=CP553_07815
NZ_PCFD01000020.1	Protein Homology	CDS	2191	2613	.	+	0	ID=cds-WP_002456062.1;Parent=gene-CP553_RS07550;Dbxref=GenBank:WP_002456062.1;Name=WP_002456062.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181,GO:0016491;gbkey=CDS;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495111.1;locus_tag=CP553_RS07550;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_002456062.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	2804	3154	.	+	.	ID=gene-CP553_RS07555;Name=CP553_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07555;old_locus_tag=CP553_07820
NZ_PCFD01000020.1	Protein Homology	CDS	2804	3154	.	+	0	ID=cds-WP_002438338.1;Parent=gene-CP553_RS07555;Dbxref=GenBank:WP_002438338.1;Name=WP_002438338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456647.1;locus_tag=CP553_RS07555;product=DUF4889 domain-containing protein;protein_id=WP_002438338.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	3437	4717	.	-	.	ID=gene-CP553_RS07560;Name=CP553_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07560;old_locus_tag=CP553_07825
NZ_PCFD01000020.1	Protein Homology	CDS	3437	4717	.	-	0	ID=cds-WP_002456060.1;Parent=gene-CP553_RS07560;Dbxref=GenBank:WP_002456060.1;Name=WP_002456060.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501129.1;locus_tag=CP553_RS07560;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_002456060.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	4882	5247	.	-	.	ID=gene-CP553_RS07565;Name=CP553_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07565;old_locus_tag=CP553_07830
NZ_PCFD01000020.1	Protein Homology	CDS	4882	5247	.	-	0	ID=cds-WP_001831482.1;Parent=gene-CP553_RS07565;Dbxref=GenBank:WP_001831482.1;Name=WP_001831482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491065.1;locus_tag=CP553_RS07565;product=DUF3139 domain-containing protein;protein_id=WP_001831482.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	5371	6000	.	-	.	ID=gene-CP553_RS07570;Name=CP553_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07570;old_locus_tag=CP553_07835
NZ_PCFD01000020.1	Protein Homology	CDS	5371	6000	.	-	0	ID=cds-WP_116843002.1;Parent=gene-CP553_RS07570;Dbxref=GenBank:WP_116843002.1;Name=WP_116843002.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832922.1;locus_tag=CP553_RS07570;product=nitroreductase family protein;protein_id=WP_116843002.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	6164	6610	.	+	.	ID=gene-CP553_RS07575;Name=CP553_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07575;old_locus_tag=CP553_07840
NZ_PCFD01000020.1	Protein Homology	CDS	6164	6610	.	+	0	ID=cds-WP_002438330.1;Parent=gene-CP553_RS07575;Dbxref=GenBank:WP_002438330.1;Name=WP_002438330.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501131.1;locus_tag=CP553_RS07575;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_002438330.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	7316	8479	.	-	.	ID=gene-CP553_RS07580;Name=CP553_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07580;old_locus_tag=CP553_07845
NZ_PCFD01000020.1	Protein Homology	CDS	7316	8479	.	-	0	ID=cds-WP_002438328.1;Parent=gene-CP553_RS07580;Dbxref=GenBank:WP_002438328.1;Name=WP_002438328.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497682.1;locus_tag=CP553_RS07580;product=nitrate/nitrite transporter;protein_id=WP_002438328.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	8736	9392	.	-	.	ID=gene-CP553_RS07585;Name=nreC;gbkey=Gene;gene=nreC;gene_biotype=protein_coding;locus_tag=CP553_RS07585;old_locus_tag=CP553_07850
NZ_PCFD01000020.1	Protein Homology	CDS	8736	9392	.	-	0	ID=cds-WP_002438326.1;Parent=gene-CP553_RS07585;Dbxref=GenBank:WP_002438326.1;Name=WP_002438326.1;Note=Involved in the regulation of the the nitrate reductase operon narGHJI;gbkey=CDS;gene=nreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464689.1;locus_tag=CP553_RS07585;product=nitrate respiration regulation response regulator NreC;protein_id=WP_002438326.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	9421	10455	.	-	.	ID=gene-CP553_RS07590;Name=CP553_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07590;old_locus_tag=CP553_07855
NZ_PCFD01000020.1	Protein Homology	CDS	9421	10455	.	-	0	ID=cds-WP_002456059.1;Parent=gene-CP553_RS07590;Dbxref=GenBank:WP_002456059.1;Name=WP_002456059.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360845.1;locus_tag=CP553_RS07590;product=sensor histidine kinase;protein_id=WP_002456059.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	10465	10917	.	-	.	ID=gene-CP553_RS07595;Name=nreA;gbkey=Gene;gene=nreA;gene_biotype=protein_coding;locus_tag=CP553_RS07595;old_locus_tag=CP553_07860
NZ_PCFD01000020.1	Protein Homology	CDS	10465	10917	.	-	0	ID=cds-WP_001831592.1;Parent=gene-CP553_RS07595;Dbxref=GenBank:WP_001831592.1;Name=WP_001831592.1;gbkey=CDS;gene=nreA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831592.1;locus_tag=CP553_RS07595;product=nitrate respiration regulation accessory nitrate sensor NreA;protein_id=WP_001831592.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	10937	11614	.	-	.	ID=gene-CP553_RS07600;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=CP553_RS07600;old_locus_tag=CP553_07865
NZ_PCFD01000020.1	Protein Homology	CDS	10937	11614	.	-	0	ID=cds-WP_002438321.1;Parent=gene-CP553_RS07600;Dbxref=GenBank:WP_002438321.1;Name=WP_002438321.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000934150.1;locus_tag=CP553_RS07600;product=respiratory nitrate reductase subunit gamma;protein_id=WP_002438321.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	11607	12182	.	-	.	ID=gene-CP553_RS07605;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=CP553_RS07605;old_locus_tag=CP553_07870
NZ_PCFD01000020.1	Protein Homology	CDS	11607	12182	.	-	0	ID=cds-WP_002456058.1;Parent=gene-CP553_RS07605;Dbxref=GenBank:WP_002456058.1;Name=WP_002456058.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606770.1;locus_tag=CP553_RS07605;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_002456058.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	12175	13728	.	-	.	ID=gene-CP553_RS07610;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=CP553_RS07610;old_locus_tag=CP553_07875
NZ_PCFD01000020.1	Protein Homology	CDS	12175	13728	.	-	0	ID=cds-WP_002438317.1;Parent=gene-CP553_RS07610;Dbxref=GenBank:WP_002438317.1;Name=WP_002438317.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384084.1;locus_tag=CP553_RS07610;product=nitrate reductase subunit beta;protein_id=WP_002438317.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	13718	17401	.	-	.	ID=gene-CP553_RS07615;Name=CP553_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07615;old_locus_tag=CP553_07880
NZ_PCFD01000020.1	Protein Homology	CDS	13718	17401	.	-	0	ID=cds-WP_002456057.1;Parent=gene-CP553_RS07615;Dbxref=GenBank:WP_002456057.1;Name=WP_002456057.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=CP553_RS07615;product=nitrate reductase subunit alpha;protein_id=WP_002456057.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	17580	18515	.	-	.	ID=gene-CP553_RS07620;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=CP553_RS07620;old_locus_tag=CP553_07885
NZ_PCFD01000020.1	Protein Homology	CDS	17580	18515	.	-	0	ID=cds-WP_002438313.1;Parent=gene-CP553_RS07620;Dbxref=GenBank:WP_002438313.1;Name=WP_002438313.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498516.1;locus_tag=CP553_RS07620;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_002438313.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	18506	18820	.	-	.	ID=gene-CP553_RS07625;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CP553_RS07625;old_locus_tag=CP553_07890
NZ_PCFD01000020.1	Protein Homology	CDS	18506	18820	.	-	0	ID=cds-WP_002438311.1;Parent=gene-CP553_RS07625;Dbxref=GenBank:WP_002438311.1;Name=WP_002438311.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831573.1;locus_tag=CP553_RS07625;product=nitrite reductase small subunit NirD;protein_id=WP_002438311.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	18823	21228	.	-	.	ID=gene-CP553_RS07630;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=CP553_RS07630;old_locus_tag=CP553_07895
NZ_PCFD01000020.1	Protein Homology	CDS	18823	21228	.	-	0	ID=cds-WP_002438309.1;Parent=gene-CP553_RS07630;Dbxref=GenBank:WP_002438309.1;Name=WP_002438309.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501146.1;locus_tag=CP553_RS07630;product=nitrite reductase large subunit NirB;protein_id=WP_002438309.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	21666	22385	.	-	.	ID=gene-CP553_RS07635;Name=CP553_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07635;old_locus_tag=CP553_07900
NZ_PCFD01000020.1	Protein Homology	CDS	21666	22385	.	-	0	ID=cds-WP_002456056.1;Parent=gene-CP553_RS07635;Dbxref=GenBank:WP_002456056.1;Name=WP_002456056.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831601.1;locus_tag=CP553_RS07635;product=sirohydrochlorin chelatase;protein_id=WP_002456056.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	22635	24110	.	+	.	ID=gene-CP553_RS07640;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=CP553_RS07640;old_locus_tag=CP553_07910
NZ_PCFD01000020.1	Protein Homology	CDS	22635	24110	.	+	0	ID=cds-WP_002438303.1;Parent=gene-CP553_RS07640;Dbxref=GenBank:WP_002438303.1;Name=WP_002438303.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447192.1;locus_tag=CP553_RS07640;product=nickel ABC transporter substrate-binding protein;protein_id=WP_002438303.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	24391	24546	.	+	.	ID=gene-CP553_RS07645;Name=CP553_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07645
NZ_PCFD01000020.1	GeneMarkS-2+	CDS	24391	24546	.	+	0	ID=cds-WP_001831613.1;Parent=gene-CP553_RS07645;Dbxref=GenBank:WP_001831613.1;Name=WP_001831613.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS07645;product=hypothetical protein;protein_id=WP_001831613.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	24846	25382	.	-	.	ID=gene-CP553_RS07650;Name=CP553_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07650;old_locus_tag=CP553_07915
NZ_PCFD01000020.1	Protein Homology	CDS	24846	25382	.	-	0	ID=cds-WP_002438301.1;Parent=gene-CP553_RS07650;Dbxref=GenBank:WP_002438301.1;Name=WP_002438301.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468285.1;locus_tag=CP553_RS07650;product=GNAT family N-acetyltransferase;protein_id=WP_002438301.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	25825	26646	.	-	.	ID=gene-CP553_RS07655;Name=CP553_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07655;old_locus_tag=CP553_07920
NZ_PCFD01000020.1	Protein Homology	CDS	25825	26646	.	-	0	ID=cds-WP_002438299.1;Parent=gene-CP553_RS07655;Dbxref=GenBank:WP_002438299.1;Name=WP_002438299.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831430.1;locus_tag=CP553_RS07655;product=formate/nitrite transporter family protein;protein_id=WP_002438299.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	26881	27351	.	-	.	ID=gene-CP553_RS07660;Name=CP553_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07660;old_locus_tag=CP553_07925
NZ_PCFD01000020.1	Protein Homology	CDS	26881	27351	.	-	0	ID=cds-WP_002438297.1;Parent=gene-CP553_RS07660;Dbxref=GenBank:WP_002438297.1;Name=WP_002438297.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465282.1;locus_tag=CP553_RS07660;product=SRPBCC family protein;protein_id=WP_002438297.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	27633	28229	.	-	.	ID=gene-CP553_RS07665;Name=CP553_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07665;old_locus_tag=CP553_07930
NZ_PCFD01000020.1	Protein Homology	CDS	27633	28229	.	-	0	ID=cds-WP_002438295.1;Parent=gene-CP553_RS07665;Dbxref=GenBank:WP_002438295.1;Name=WP_002438295.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499881.1;locus_tag=CP553_RS07665;product=DsbA family protein;protein_id=WP_002438295.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	28253	28615	.	-	.	ID=gene-CP553_RS07670;Name=CP553_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07670;old_locus_tag=CP553_07935
NZ_PCFD01000020.1	Protein Homology	CDS	28253	28615	.	-	0	ID=cds-WP_001831622.1;Parent=gene-CP553_RS07670;Dbxref=GenBank:WP_001831622.1;Name=WP_001831622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831622.1;locus_tag=CP553_RS07670;product=DUF4467 domain-containing protein;protein_id=WP_001831622.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	28976	30223	.	+	.	ID=gene-CP553_RS07675;Name=CP553_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07675;old_locus_tag=CP553_07940
NZ_PCFD01000020.1	Protein Homology	CDS	28976	30223	.	+	0	ID=cds-WP_002438293.1;Parent=gene-CP553_RS07675;Dbxref=GenBank:WP_002438293.1;Name=WP_002438293.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502565.1;locus_tag=CP553_RS07675;product=aminoacyltransferase;protein_id=WP_002438293.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	30609	30755	.	+	.	ID=gene-CP553_RS07680;Name=CP553_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07680
NZ_PCFD01000020.1	GeneMarkS-2+	CDS	30609	30755	.	+	0	ID=cds-WP_001831527.1;Parent=gene-CP553_RS07680;Dbxref=GenBank:WP_001831527.1;Name=WP_001831527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS07680;product=hypothetical protein;protein_id=WP_001831527.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	30899	31630	.	-	.	ID=gene-CP553_RS07685;Name=CP553_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07685;old_locus_tag=CP553_07945
NZ_PCFD01000020.1	Protein Homology	CDS	30899	31630	.	-	0	ID=cds-WP_001831593.1;Parent=gene-CP553_RS07685;Dbxref=GenBank:WP_001831593.1;Name=WP_001831593.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501159.1;locus_tag=CP553_RS07685;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_001831593.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	31627	32346	.	-	.	ID=gene-CP553_RS07690;Name=CP553_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07690;old_locus_tag=CP553_07950
NZ_PCFD01000020.1	Protein Homology	CDS	31627	32346	.	-	0	ID=cds-WP_001831576.1;Parent=gene-CP553_RS07690;Dbxref=GenBank:WP_001831576.1;Name=WP_001831576.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501160.1;locus_tag=CP553_RS07690;product=amino acid ABC transporter permease;protein_id=WP_001831576.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	32327	33115	.	-	.	ID=gene-CP553_RS07695;Name=CP553_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07695;old_locus_tag=CP553_07955
NZ_PCFD01000020.1	Protein Homology	CDS	32327	33115	.	-	0	ID=cds-WP_002438286.1;Parent=gene-CP553_RS07695;Dbxref=GenBank:WP_002438286.1;Name=WP_002438286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368118.1;locus_tag=CP553_RS07695;product=transporter substrate-binding domain-containing protein;protein_id=WP_002438286.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	33330	33434	.	+	.	ID=gene-CP553_RS07700;Name=CP553_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07700;old_locus_tag=CP553_07960
NZ_PCFD01000020.1	Protein Homology	CDS	33330	33434	.	+	0	ID=cds-WP_002438284.1;Parent=gene-CP553_RS07700;Dbxref=GenBank:WP_002438284.1;Name=WP_002438284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501164.1;locus_tag=CP553_RS07700;product=putative metal homeostasis protein;protein_id=WP_002438284.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	33620	34306	.	-	.	ID=gene-CP553_RS07705;Name=CP553_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07705;old_locus_tag=CP553_07965
NZ_PCFD01000020.1	Protein Homology	CDS	33620	34306	.	-	0	ID=cds-WP_002438282.1;Parent=gene-CP553_RS07705;Dbxref=GenBank:WP_002438282.1;Name=WP_002438282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501165.1;locus_tag=CP553_RS07705;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_002438282.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	34548	35429	.	-	.	ID=gene-CP553_RS07710;Name=CP553_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07710;old_locus_tag=CP553_07970
NZ_PCFD01000020.1	Protein Homology	CDS	34548	35429	.	-	0	ID=cds-WP_002456052.1;Parent=gene-CP553_RS07710;Dbxref=GenBank:WP_002456052.1;Name=WP_002456052.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458142.1;locus_tag=CP553_RS07710;product=cation diffusion facilitator family transporter;protein_id=WP_002456052.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	35720	36106	.	-	.	ID=gene-CP553_RS07715;Name=CP553_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07715;old_locus_tag=CP553_07975
NZ_PCFD01000020.1	Protein Homology	CDS	35720	36106	.	-	0	ID=cds-WP_002456051.1;Parent=gene-CP553_RS07715;Dbxref=GenBank:WP_002456051.1;Name=WP_002456051.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456051.1;locus_tag=CP553_RS07715;product=GtrA family protein;protein_id=WP_002456051.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	36127	37599	.	-	.	ID=gene-CP553_RS07720;Name=CP553_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07720;old_locus_tag=CP553_07980
NZ_PCFD01000020.1	Protein Homology	CDS	36127	37599	.	-	0	ID=cds-WP_002438276.1;Parent=gene-CP553_RS07720;Dbxref=GenBank:WP_002438276.1;Name=WP_002438276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496283.1;locus_tag=CP553_RS07720;product=hypothetical protein;protein_id=WP_002438276.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	37883	39034	.	+	.	ID=gene-CP553_RS07725;Name=CP553_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07725;old_locus_tag=CP553_07985
NZ_PCFD01000020.1	Protein Homology	CDS	37883	39034	.	+	0	ID=cds-WP_002438274.1;Parent=gene-CP553_RS07725;Dbxref=GenBank:WP_002438274.1;Name=WP_002438274.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469041.1;locus_tag=CP553_RS07725;product=glycerate kinase;protein_id=WP_002438274.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	39065	39766	.	+	.	ID=gene-CP553_RS07730;Name=CP553_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07730;old_locus_tag=CP553_07990
NZ_PCFD01000020.1	Protein Homology	CDS	39065	39766	.	+	0	ID=cds-WP_001831448.1;Parent=gene-CP553_RS07730;Dbxref=GenBank:WP_001831448.1;Name=WP_001831448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456653.1;locus_tag=CP553_RS07730;product=membrane protein;protein_id=WP_001831448.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	40030	41229	.	+	.	ID=gene-CP553_RS07735;Name=CP553_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07735;old_locus_tag=CP553_07995
NZ_PCFD01000020.1	Protein Homology	CDS	40030	41229	.	+	0	ID=cds-WP_002456049.1;Parent=gene-CP553_RS07735;Dbxref=GenBank:WP_002456049.1;Name=WP_002456049.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468290.1;locus_tag=CP553_RS07735;product=multidrug effflux MFS transporter;protein_id=WP_002456049.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	41533	42144	.	+	.	ID=gene-CP553_RS07740;Name=CP553_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07740;old_locus_tag=CP553_08000
NZ_PCFD01000020.1	Protein Homology	CDS	41533	42144	.	+	0	ID=cds-WP_032601533.1;Parent=gene-CP553_RS07740;Dbxref=GenBank:WP_032601533.1;Name=WP_032601533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453940.1;locus_tag=CP553_RS07740;product=C39 family peptidase;protein_id=WP_032601533.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	42207	43016	.	-	.	ID=gene-CP553_RS07745;Name=CP553_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07745;old_locus_tag=CP553_08005
NZ_PCFD01000020.1	Protein Homology	CDS	42207	43016	.	-	0	ID=cds-WP_002456048.1;Parent=gene-CP553_RS07745;Dbxref=GenBank:WP_002456048.1;Name=WP_002456048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464550.1;locus_tag=CP553_RS07745;product=metallophosphoesterase;protein_id=WP_002456048.1;transl_table=11
NZ_PCFD01000020.1	RefSeq	gene	43334	44710	.	+	.	ID=gene-CP553_RS07750;Name=CP553_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07750;old_locus_tag=CP553_08010
NZ_PCFD01000020.1	Protein Homology	CDS	43334	44710	.	+	0	ID=cds-WP_001832903.1;Parent=gene-CP553_RS07750;Dbxref=GenBank:WP_001832903.1;Name=WP_001832903.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468224.1;locus_tag=CP553_RS07750;product=amino acid permease;protein_id=WP_001832903.1;transl_table=11
##sequence-region NZ_PCFD01000021.1 1 43337
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000021.1	RefSeq	region	1	43337	.	+	.	ID=NZ_PCFD01000021.1:1..43337;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000021.1	RefSeq	gene	1	1393	.	-	.	ID=gene-CP553_RS07755;Name=CP553_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07755;old_locus_tag=CP553_08015;partial=true;start_range=.,1
NZ_PCFD01000021.1	Protein Homology	CDS	1	1393	.	-	0	ID=cds-WP_116843003.1;Parent=gene-CP553_RS07755;Dbxref=GenBank:WP_116843003.1;Name=WP_116843003.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456843.1;locus_tag=CP553_RS07755;partial=true;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_116843003.1;start_range=.,1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	1410	2441	.	-	.	ID=gene-CP553_RS07760;Name=CP553_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07760;old_locus_tag=CP553_08020
NZ_PCFD01000021.1	Protein Homology	CDS	1410	2441	.	-	0	ID=cds-WP_001832309.1;Parent=gene-CP553_RS07760;Dbxref=GenBank:WP_001832309.1;Name=WP_001832309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495850.1;locus_tag=CP553_RS07760;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_001832309.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	2434	3150	.	-	.	ID=gene-CP553_RS07765;Name=CP553_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07765;old_locus_tag=CP553_08025
NZ_PCFD01000021.1	Protein Homology	CDS	2434	3150	.	-	0	ID=cds-WP_001832311.1;Parent=gene-CP553_RS07765;Dbxref=GenBank:WP_001832311.1;Name=WP_001832311.1;Ontology_term=GO:0008299,GO:0070567;gbkey=CDS;go_function=cytidylyltransferase activity|0070567||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491432.1;locus_tag=CP553_RS07765;product=IspD/TarI family cytidylyltransferase;protein_id=WP_001832311.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	3420	4496	.	-	.	ID=gene-CP553_RS07770;Name=CP553_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07770;old_locus_tag=CP553_08030
NZ_PCFD01000021.1	Protein Homology	CDS	3420	4496	.	-	0	ID=cds-WP_001832304.1;Parent=gene-CP553_RS07770;Dbxref=GenBank:WP_001832304.1;Name=WP_001832304.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499108.1;locus_tag=CP553_RS07770;product=branched-chain amino acid aminotransferase;protein_id=WP_001832304.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	4953	5909	.	-	.	ID=gene-CP553_RS07775;Name=CP553_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07775;old_locus_tag=CP553_08035
NZ_PCFD01000021.1	Protein Homology	CDS	4953	5909	.	-	0	ID=cds-WP_001832307.1;Parent=gene-CP553_RS07775;Dbxref=GenBank:WP_001832307.1;Name=WP_001832307.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012084810.1;locus_tag=CP553_RS07775;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001832307.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	6168	6377	.	+	.	ID=gene-CP553_RS07780;Name=CP553_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07780;old_locus_tag=CP553_08040
NZ_PCFD01000021.1	Protein Homology	CDS	6168	6377	.	+	0	ID=cds-WP_002469109.1;Parent=gene-CP553_RS07780;Dbxref=GenBank:WP_002469109.1;Name=WP_002469109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477512.1;locus_tag=CP553_RS07780;product=hypothetical protein;protein_id=WP_002469109.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	6465	7415	.	-	.	ID=gene-CP553_RS07785;Name=CP553_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07785;old_locus_tag=CP553_08045
NZ_PCFD01000021.1	Protein Homology	CDS	6465	7415	.	-	0	ID=cds-WP_002438698.1;Parent=gene-CP553_RS07785;Dbxref=GenBank:WP_002438698.1;Name=WP_002438698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438698.1;locus_tag=CP553_RS07785;product=ornithine cyclodeaminase family protein;protein_id=WP_002438698.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	7667	8176	.	-	.	ID=gene-CP553_RS07790;Name=CP553_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07790;old_locus_tag=CP553_08050
NZ_PCFD01000021.1	Protein Homology	CDS	7667	8176	.	-	0	ID=cds-WP_001832276.1;Parent=gene-CP553_RS07790;Dbxref=GenBank:WP_001832276.1;Name=WP_001832276.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484548.1;locus_tag=CP553_RS07790;product=GNAT family N-acetyltransferase;protein_id=WP_001832276.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	8750	9919	.	+	.	ID=gene-CP553_RS07795;Name=CP553_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07795;old_locus_tag=CP553_08055
NZ_PCFD01000021.1	Protein Homology	CDS	8750	9919	.	+	0	ID=cds-WP_002494717.1;Parent=gene-CP553_RS07795;Dbxref=GenBank:WP_002494717.1;Name=WP_002494717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498065.1;locus_tag=CP553_RS07795;product=M20 family metallopeptidase;protein_id=WP_002494717.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	10045	11229	.	-	.	ID=gene-CP553_RS07800;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=CP553_RS07800;old_locus_tag=CP553_08060
NZ_PCFD01000021.1	Protein Homology	CDS	10045	11229	.	-	0	ID=cds-WP_001832289.1;Parent=gene-CP553_RS07800;Dbxref=GenBank:WP_001832289.1;Name=WP_001832289.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499102.1;locus_tag=CP553_RS07800;product=elongation factor Tu;protein_id=WP_001832289.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	11448	13529	.	-	.	ID=gene-CP553_RS07805;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=CP553_RS07805;old_locus_tag=CP553_08065
NZ_PCFD01000021.1	Protein Homology	CDS	11448	13529	.	-	0	ID=cds-WP_001832287.1;Parent=gene-CP553_RS07805;Dbxref=GenBank:WP_001832287.1;Name=WP_001832287.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804675.1;locus_tag=CP553_RS07805;product=elongation factor G;protein_id=WP_001832287.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	13649	14119	.	-	.	ID=gene-CP553_RS07810;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=CP553_RS07810;old_locus_tag=CP553_08070
NZ_PCFD01000021.1	Protein Homology	CDS	13649	14119	.	-	0	ID=cds-WP_001137495.1;Parent=gene-CP553_RS07810;Dbxref=GenBank:WP_001137495.1;Name=WP_001137495.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=CP553_RS07810;product=30S ribosomal protein S7;protein_id=WP_001137495.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	14190	14603	.	-	.	ID=gene-CP553_RS07815;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=CP553_RS07815;old_locus_tag=CP553_08075
NZ_PCFD01000021.1	Protein Homology	CDS	14190	14603	.	-	0	ID=cds-WP_001833079.1;Parent=gene-CP553_RS07815;Dbxref=GenBank:WP_001833079.1;Name=WP_001833079.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142337.1;locus_tag=CP553_RS07815;product=30S ribosomal protein S12;protein_id=WP_001833079.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	14694	14954	.	-	.	ID=gene-CP553_RS07820;Name=CP553_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07820;old_locus_tag=CP553_08080
NZ_PCFD01000021.1	Protein Homology	CDS	14694	14954	.	-	0	ID=cds-WP_001832275.1;Parent=gene-CP553_RS07820;Dbxref=GenBank:WP_001832275.1;Name=WP_001832275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505638.1;locus_tag=CP553_RS07820;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=WP_001832275.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	15282	18878	.	-	.	ID=gene-CP553_RS07825;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=CP553_RS07825;old_locus_tag=CP553_08085
NZ_PCFD01000021.1	Protein Homology	CDS	15282	18878	.	-	0	ID=cds-WP_002438689.1;Parent=gene-CP553_RS07825;Dbxref=GenBank:WP_002438689.1;Name=WP_002438689.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499097.1;locus_tag=CP553_RS07825;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002438689.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	19037	22588	.	-	.	ID=gene-CP553_RS07830;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=CP553_RS07830;old_locus_tag=CP553_08090
NZ_PCFD01000021.1	Protein Homology	CDS	19037	22588	.	-	0	ID=cds-WP_001833083.1;Parent=gene-CP553_RS07830;Dbxref=GenBank:WP_001833083.1;Name=WP_001833083.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499096.2;locus_tag=CP553_RS07830;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_001833083.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	22804	23412	.	-	.	ID=gene-CP553_RS07835;Name=CP553_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07835;old_locus_tag=CP553_08095
NZ_PCFD01000021.1	Protein Homology	CDS	22804	23412	.	-	0	ID=cds-WP_002495284.1;Parent=gene-CP553_RS07835;Dbxref=GenBank:WP_002495284.1;Name=WP_002495284.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505637.1;locus_tag=CP553_RS07835;product=class I SAM-dependent methyltransferase;protein_id=WP_002495284.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	23604	23972	.	-	.	ID=gene-CP553_RS07840;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=CP553_RS07840;old_locus_tag=CP553_08100
NZ_PCFD01000021.1	Protein Homology	CDS	23604	23972	.	-	0	ID=cds-WP_001832283.1;Parent=gene-CP553_RS07840;Dbxref=GenBank:WP_001832283.1;Name=WP_001832283.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1;locus_tag=CP553_RS07840;product=50S ribosomal protein L7/L12;protein_id=WP_001832283.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	24010	24510	.	-	.	ID=gene-CP553_RS07845;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=CP553_RS07845;old_locus_tag=CP553_08105
NZ_PCFD01000021.1	Protein Homology	CDS	24010	24510	.	-	0	ID=cds-WP_001832306.1;Parent=gene-CP553_RS07845;Dbxref=GenBank:WP_001832306.1;Name=WP_001832306.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499093.1;locus_tag=CP553_RS07845;product=50S ribosomal protein L10;protein_id=WP_001832306.1;transl_table=11
NZ_PCFD01000021.1	cmsearch	sequence_feature	24550	24697	.	-	.	ID=id-NZ_PCFD01000021.1:24550..24697;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PCFD01000021.1	RefSeq	gene	24785	25480	.	-	.	ID=gene-CP553_RS07850;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=CP553_RS07850;old_locus_tag=CP553_08115
NZ_PCFD01000021.1	Protein Homology	CDS	24785	25480	.	-	0	ID=cds-WP_001832314.1;Parent=gene-CP553_RS07850;Dbxref=GenBank:WP_001832314.1;Name=WP_001832314.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468572.1;locus_tag=CP553_RS07850;product=50S ribosomal protein L1;protein_id=WP_001832314.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	25693	26115	.	-	.	ID=gene-CP553_RS07855;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=CP553_RS07855;old_locus_tag=CP553_08120
NZ_PCFD01000021.1	Protein Homology	CDS	25693	26115	.	-	0	ID=cds-WP_001832298.1;Parent=gene-CP553_RS07855;Dbxref=GenBank:WP_001832298.1;Name=WP_001832298.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664221.1;locus_tag=CP553_RS07855;product=50S ribosomal protein L11;protein_id=WP_001832298.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	26447	26995	.	-	.	ID=gene-CP553_RS07860;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=CP553_RS07860;old_locus_tag=CP553_08125
NZ_PCFD01000021.1	Protein Homology	CDS	26447	26995	.	-	0	ID=cds-WP_001832303.1;Parent=gene-CP553_RS07860;Dbxref=GenBank:WP_001832303.1;Name=WP_001832303.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1;locus_tag=CP553_RS07860;product=transcription termination/antitermination protein NusG;protein_id=WP_001832303.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	27006	27188	.	-	.	ID=gene-CP553_RS07865;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=CP553_RS07865;old_locus_tag=CP553_08130
NZ_PCFD01000021.1	Protein Homology	CDS	27006	27188	.	-	0	ID=cds-WP_002438679.1;Parent=gene-CP553_RS07865;Dbxref=GenBank:WP_002438679.1;Name=WP_002438679.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499089.2;locus_tag=CP553_RS07865;product=preprotein translocase subunit SecE;protein_id=WP_002438679.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	27251	27394	.	-	.	ID=gene-CP553_RS07870;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CP553_RS07870;old_locus_tag=CP553_08135
NZ_PCFD01000021.1	Protein Homology	CDS	27251	27394	.	-	0	ID=cds-WP_001832285.1;Parent=gene-CP553_RS07870;Dbxref=GenBank:WP_001832285.1;Name=WP_001832285.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451211.1;locus_tag=CP553_RS07870;product=50S ribosomal protein L33;protein_id=WP_001832285.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	27518	28093	.	-	.	ID=gene-CP553_RS07875;Name=CP553_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07875;old_locus_tag=CP553_08140
NZ_PCFD01000021.1	Protein Homology	CDS	27518	28093	.	-	0	ID=cds-WP_001832284.1;Parent=gene-CP553_RS07875;Dbxref=GenBank:WP_001832284.1;Name=WP_001832284.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832284.1;locus_tag=CP553_RS07875;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_001832284.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	28163	28690	.	-	.	ID=gene-CP553_RS07880;Name=CP553_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07880;old_locus_tag=CP553_08145
NZ_PCFD01000021.1	Protein Homology	CDS	28163	28690	.	-	0	ID=cds-WP_001832317.1;Parent=gene-CP553_RS07880;Dbxref=GenBank:WP_001832317.1;Name=WP_001832317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832317.1;locus_tag=CP553_RS07880;product=NYN domain-containing protein;protein_id=WP_001832317.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	28687	29436	.	-	.	ID=gene-CP553_RS07885;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=CP553_RS07885;old_locus_tag=CP553_08150
NZ_PCFD01000021.1	Protein Homology	CDS	28687	29436	.	-	0	ID=cds-WP_002494171.1;Parent=gene-CP553_RS07885;Dbxref=GenBank:WP_002494171.1;Name=WP_002494171.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276729.1;locus_tag=CP553_RS07885;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_002494171.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	29444	29830	.	-	.	ID=gene-CP553_RS07890;Name=CP553_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07890;old_locus_tag=CP553_08155
NZ_PCFD01000021.1	Protein Homology	CDS	29444	29830	.	-	0	ID=cds-WP_001833082.1;Parent=gene-CP553_RS07890;Dbxref=GenBank:WP_001833082.1;Name=WP_001833082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491434.1;locus_tag=CP553_RS07890;product=Mini-ribonuclease 3;protein_id=WP_001833082.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	29835	31235	.	-	.	ID=gene-CP553_RS07895;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=CP553_RS07895;old_locus_tag=CP553_08160
NZ_PCFD01000021.1	Protein Homology	CDS	29835	31235	.	-	0	ID=cds-WP_002438671.1;Parent=gene-CP553_RS07895;Dbxref=GenBank:WP_002438671.1;Name=WP_002438671.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631968.1;locus_tag=CP553_RS07895;product=cysteine--tRNA ligase;protein_id=WP_002438671.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	31219	31848	.	-	.	ID=gene-CP553_RS07900;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=CP553_RS07900;old_locus_tag=CP553_08165
NZ_PCFD01000021.1	Protein Homology	CDS	31219	31848	.	-	0	ID=cds-WP_002438669.1;Parent=gene-CP553_RS07900;Dbxref=GenBank:WP_002438669.1;Name=WP_002438669.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187697.1;locus_tag=CP553_RS07900;product=serine O-acetyltransferase;protein_id=WP_002438669.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	32233	33687	.	-	.	ID=gene-CP553_RS07905;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=CP553_RS07905;old_locus_tag=CP553_08170
NZ_PCFD01000021.1	Protein Homology	CDS	32233	33687	.	-	0	ID=cds-WP_002438667.1;Parent=gene-CP553_RS07905;Dbxref=GenBank:WP_002438667.1;Name=WP_002438667.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511256.1;locus_tag=CP553_RS07905;product=glutamate--tRNA ligase;protein_id=WP_002438667.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	34097	35155	.	-	.	ID=gene-CP553_RS07910;Name=CP553_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07910;old_locus_tag=CP553_08175
NZ_PCFD01000021.1	Protein Homology	CDS	34097	35155	.	-	0	ID=cds-WP_001832313.1;Parent=gene-CP553_RS07910;Dbxref=GenBank:WP_001832313.1;Name=WP_001832313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465100.1;locus_tag=CP553_RS07910;product=PIN/TRAM domain-containing protein;protein_id=WP_001832313.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	35209	36582	.	-	.	ID=gene-CP553_RS07915;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=CP553_RS07915;old_locus_tag=CP553_08180
NZ_PCFD01000021.1	Protein Homology	CDS	35209	36582	.	-	0	ID=cds-WP_002438664.1;Parent=gene-CP553_RS07915;Dbxref=GenBank:WP_002438664.1;Name=WP_002438664.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477499.1;locus_tag=CP553_RS07915;product=DNA repair protein RadA;protein_id=WP_002438664.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	37073	39526	.	-	.	ID=gene-CP553_RS07920;Name=CP553_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07920;old_locus_tag=CP553_08185
NZ_PCFD01000021.1	Protein Homology	CDS	37073	39526	.	-	0	ID=cds-WP_001832300.1;Parent=gene-CP553_RS07920;Dbxref=GenBank:WP_001832300.1;Name=WP_001832300.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465099.1;locus_tag=CP553_RS07920;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_001832300.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	39540	40547	.	-	.	ID=gene-CP553_RS07925;Name=CP553_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07925;old_locus_tag=CP553_08190
NZ_PCFD01000021.1	Protein Homology	CDS	39540	40547	.	-	0	ID=cds-WP_002438663.1;Parent=gene-CP553_RS07925;Dbxref=GenBank:WP_002438663.1;Name=WP_002438663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499077.1;locus_tag=CP553_RS07925;product=protein arginine kinase;protein_id=WP_002438663.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	40537	41100	.	-	.	ID=gene-CP553_RS07930;Name=CP553_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07930;old_locus_tag=CP553_08195
NZ_PCFD01000021.1	Protein Homology	CDS	40537	41100	.	-	0	ID=cds-WP_002469112.1;Parent=gene-CP553_RS07930;Dbxref=GenBank:WP_002469112.1;Name=WP_002469112.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832265.1;locus_tag=CP553_RS07930;product=UvrB/UvrC motif-containing protein;protein_id=WP_002469112.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	41121	41582	.	-	.	ID=gene-CP553_RS07935;Name=CP553_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07935;old_locus_tag=CP553_08200
NZ_PCFD01000021.1	Protein Homology	CDS	41121	41582	.	-	0	ID=cds-WP_001832288.1;Parent=gene-CP553_RS07935;Dbxref=GenBank:WP_001832288.1;Name=WP_001832288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551761.1;locus_tag=CP553_RS07935;product=CtsR family transcriptional regulator;protein_id=WP_001832288.1;transl_table=11
NZ_PCFD01000021.1	RefSeq	gene	41739	42953	.	+	.	ID=gene-CP553_RS07940;Name=CP553_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07940;old_locus_tag=CP553_08205
NZ_PCFD01000021.1	Protein Homology	CDS	41739	42953	.	+	0	ID=cds-WP_002438658.1;Parent=gene-CP553_RS07940;Dbxref=GenBank:WP_002438658.1;Name=WP_002438658.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363115.1;locus_tag=CP553_RS07940;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_002438658.1;transl_table=11
##sequence-region NZ_PCFD01000022.1 1 42996
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000022.1	RefSeq	region	1	42996	.	+	.	ID=NZ_PCFD01000022.1:1..42996;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000022.1	RefSeq	gene	1	158	.	+	.	ID=gene-CP553_RS07950;Name=CP553_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07950;old_locus_tag=CP553_08215;partial=true;start_range=.,1
NZ_PCFD01000022.1	Protein Homology	CDS	1	158	.	+	2	ID=cds-WP_324187389.1;Parent=gene-CP553_RS07950;Dbxref=GenBank:WP_324187389.1;Name=WP_324187389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501337.1;locus_tag=CP553_RS07950;partial=true;product=CHAP domain-containing protein;protein_id=WP_324187389.1;start_range=.,1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	485	1645	.	+	.	ID=gene-CP553_RS07955;Name=CP553_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07955;old_locus_tag=CP553_08225
NZ_PCFD01000022.1	Protein Homology	CDS	485	1645	.	+	0	ID=cds-WP_001832328.1;Parent=gene-CP553_RS07955;Dbxref=GenBank:WP_001832328.1;Name=WP_001832328.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465124.1;locus_tag=CP553_RS07955;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_001832328.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	pseudogene	1658	2657	.	+	.	ID=gene-CP553_RS07960;Name=CP553_RS07960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS07960;old_locus_tag=CP553_08230;pseudo=true
NZ_PCFD01000022.1	Protein Homology	CDS	1658	2657	.	+	0	ID=cds-CP553_RS07960;Parent=gene-CP553_RS07960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959289.1;locus_tag=CP553_RS07960;product=D-lactate dehydrogenase;pseudo=true;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	2711	2917	.	-	.	ID=gene-CP553_RS07965;Name=copZ;gbkey=Gene;gene=copZ;gene_biotype=protein_coding;locus_tag=CP553_RS07965;old_locus_tag=CP553_08235
NZ_PCFD01000022.1	Protein Homology	CDS	2711	2917	.	-	0	ID=cds-WP_001832344.1;Parent=gene-CP553_RS07965;Dbxref=GenBank:WP_001832344.1;Name=WP_001832344.1;Ontology_term=GO:0005507;gbkey=CDS;gene=copZ;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832344.1;locus_tag=CP553_RS07965;product=copper chaperone CopZ;protein_id=WP_001832344.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	3049	5433	.	-	.	ID=gene-CP553_RS07970;Name=CP553_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07970;old_locus_tag=CP553_08240
NZ_PCFD01000022.1	Protein Homology	CDS	3049	5433	.	-	0	ID=cds-WP_002438084.1;Parent=gene-CP553_RS07970;Dbxref=GenBank:WP_002438084.1;Name=WP_002438084.1;Ontology_term=GO:0006812,GO:0005524,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470203.1;locus_tag=CP553_RS07970;product=heavy metal translocating P-type ATPase;protein_id=WP_002438084.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	5670	5876	.	-	.	ID=gene-CP553_RS07975;Name=CP553_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07975;old_locus_tag=CP553_08245
NZ_PCFD01000022.1	Protein Homology	CDS	5670	5876	.	-	0	ID=cds-WP_001832327.1;Parent=gene-CP553_RS07975;Dbxref=GenBank:WP_001832327.1;Name=WP_001832327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494521.1;locus_tag=CP553_RS07975;product=hypothetical protein;protein_id=WP_001832327.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	6079	6948	.	+	.	ID=gene-CP553_RS07980;Name=CP553_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07980;old_locus_tag=CP553_08250
NZ_PCFD01000022.1	Protein Homology	CDS	6079	6948	.	+	0	ID=cds-WP_001832349.1;Parent=gene-CP553_RS07980;Dbxref=GenBank:WP_001832349.1;Name=WP_001832349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465127.1;locus_tag=CP553_RS07980;product=SDR family oxidoreductase;protein_id=WP_001832349.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	7450	8994	.	+	.	ID=gene-CP553_RS07985;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=CP553_RS07985;old_locus_tag=CP553_08255
NZ_PCFD01000022.1	Protein Homology	CDS	7450	8994	.	+	0	ID=cds-WP_002438089.1;Parent=gene-CP553_RS07985;Dbxref=GenBank:WP_002438089.1;Name=WP_002438089.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA;go_process=L-proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274825.1;locus_tag=CP553_RS07985;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_002438089.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	9289	9516	.	+	.	ID=gene-CP553_RS07990;Name=CP553_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS07990;old_locus_tag=CP553_08260
NZ_PCFD01000022.1	Protein Homology	CDS	9289	9516	.	+	0	ID=cds-WP_001832332.1;Parent=gene-CP553_RS07990;Dbxref=GenBank:WP_001832332.1;Name=WP_001832332.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447077.1;locus_tag=CP553_RS07990;product=FeoA family protein;protein_id=WP_001832332.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	9522	11516	.	+	.	ID=gene-CP553_RS07995;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=CP553_RS07995;old_locus_tag=CP553_08265
NZ_PCFD01000022.1	Protein Homology	CDS	9522	11516	.	+	0	ID=cds-WP_001832356.1;Parent=gene-CP553_RS07995;Dbxref=GenBank:WP_001832356.1;Name=WP_001832356.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467714.1;locus_tag=CP553_RS07995;product=ferrous iron transport protein B;protein_id=WP_001832356.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	11531	11713	.	+	.	ID=gene-CP553_RS08000;Name=CP553_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08000;old_locus_tag=CP553_08270
NZ_PCFD01000022.1	Protein Homology	CDS	11531	11713	.	+	0	ID=cds-WP_001832330.1;Parent=gene-CP553_RS08000;Dbxref=GenBank:WP_001832330.1;Name=WP_001832330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494520.1;locus_tag=CP553_RS08000;product=FeoB-associated Cys-rich membrane protein;protein_id=WP_001832330.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	11896	12360	.	+	.	ID=gene-CP553_RS08005;Name=CP553_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08005;old_locus_tag=CP553_08275
NZ_PCFD01000022.1	Protein Homology	CDS	11896	12360	.	+	0	ID=cds-WP_002438094.1;Parent=gene-CP553_RS08005;Dbxref=GenBank:WP_002438094.1;Name=WP_002438094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456695.1;locus_tag=CP553_RS08005;product=hypothetical protein;protein_id=WP_002438094.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	12665	13183	.	+	.	ID=gene-CP553_RS08010;Name=CP553_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08010;old_locus_tag=CP553_08280
NZ_PCFD01000022.1	Protein Homology	CDS	12665	13183	.	+	0	ID=cds-WP_001832355.1;Parent=gene-CP553_RS08010;Dbxref=GenBank:WP_001832355.1;Name=WP_001832355.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832355.1;locus_tag=CP553_RS08010;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_001832355.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	13435	14601	.	-	.	ID=gene-CP553_RS08015;Name=CP553_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08015;old_locus_tag=CP553_08285
NZ_PCFD01000022.1	Protein Homology	CDS	13435	14601	.	-	0	ID=cds-WP_002456031.1;Parent=gene-CP553_RS08015;Dbxref=GenBank:WP_002456031.1;Name=WP_002456031.1;Ontology_term=GO:0004421;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA synthase activity|0004421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501316.1;locus_tag=CP553_RS08015;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_002456031.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	14846	16123	.	+	.	ID=gene-CP553_RS08020;Name=CP553_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08020;old_locus_tag=CP553_08290
NZ_PCFD01000022.1	Protein Homology	CDS	14846	16123	.	+	0	ID=cds-WP_002438099.1;Parent=gene-CP553_RS08020;Dbxref=GenBank:WP_002438099.1;Name=WP_002438099.1;Ontology_term=GO:0015936,GO:0004420,GO:0016616;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA reductase (NADPH) activity|0004420||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=coenzyme A metabolic process|0015936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438099.1;locus_tag=CP553_RS08020;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=WP_002438099.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	16200	16631	.	-	.	ID=gene-CP553_RS08025;Name=CP553_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08025;old_locus_tag=CP553_08295
NZ_PCFD01000022.1	Protein Homology	CDS	16200	16631	.	-	0	ID=cds-WP_002438102.1;Parent=gene-CP553_RS08025;Dbxref=GenBank:WP_002438102.1;Name=WP_002438102.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500623.1;locus_tag=CP553_RS08025;product=CHAP domain-containing protein;protein_id=WP_002438102.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	16889	17104	.	-	.	ID=gene-CP553_RS08030;Name=CP553_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08030;old_locus_tag=CP553_08300
NZ_PCFD01000022.1	Protein Homology	CDS	16889	17104	.	-	0	ID=cds-WP_001832364.1;Parent=gene-CP553_RS08030;Dbxref=GenBank:WP_001832364.1;Name=WP_001832364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447085.1;locus_tag=CP553_RS08030;product=sterile alpha motif-like domain-containing protein;protein_id=WP_001832364.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	17292	18176	.	+	.	ID=gene-CP553_RS08035;Name=cidR;gbkey=Gene;gene=cidR;gene_biotype=protein_coding;locus_tag=CP553_RS08035;old_locus_tag=CP553_08305
NZ_PCFD01000022.1	Protein Homology	CDS	17292	18176	.	+	0	ID=cds-WP_001832366.1;Parent=gene-CP553_RS08035;Dbxref=GenBank:WP_001832366.1;Name=WP_001832366.1;gbkey=CDS;gene=cidR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477002.1;locus_tag=CP553_RS08035;product=cidABC operon transcriptional activator CidR;protein_id=WP_001832366.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	18488	18880	.	+	.	ID=gene-CP553_RS08040;Name=CP553_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08040;old_locus_tag=CP553_08310
NZ_PCFD01000022.1	Protein Homology	CDS	18488	18880	.	+	0	ID=cds-WP_001832353.1;Parent=gene-CP553_RS08040;Dbxref=GenBank:WP_001832353.1;Name=WP_001832353.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473310.1;locus_tag=CP553_RS08040;product=CidA/LrgA family protein;protein_id=WP_001832353.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	18877	19566	.	+	.	ID=gene-CP553_RS08045;Name=CP553_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08045;old_locus_tag=CP553_08315
NZ_PCFD01000022.1	Protein Homology	CDS	18877	19566	.	+	0	ID=cds-WP_001832367.1;Parent=gene-CP553_RS08045;Dbxref=GenBank:WP_001832367.1;Name=WP_001832367.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501307.1;locus_tag=CP553_RS08045;product=LrgB family protein;protein_id=WP_001832367.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	19616	21355	.	+	.	ID=gene-CP553_RS08050;Name=CP553_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08050;old_locus_tag=CP553_08320
NZ_PCFD01000022.1	Protein Homology	CDS	19616	21355	.	+	0	ID=cds-WP_001832342.1;Parent=gene-CP553_RS08050;Dbxref=GenBank:WP_001832342.1;Name=WP_001832342.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501306.1;locus_tag=CP553_RS08050;product=pyruvate oxidase;protein_id=WP_001832342.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	21599	23626	.	+	.	ID=gene-CP553_RS08055;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=CP553_RS08055;old_locus_tag=CP553_08325
NZ_PCFD01000022.1	Protein Homology	CDS	21599	23626	.	+	0	ID=cds-WP_001832339.1;Parent=gene-CP553_RS08055;Dbxref=GenBank:WP_001832339.1;Name=WP_001832339.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832339.1;locus_tag=CP553_RS08055;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_001832339.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	23646	24026	.	+	.	ID=gene-CP553_RS08060;Name=CP553_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08060;old_locus_tag=CP553_08330
NZ_PCFD01000022.1	GeneMarkS-2+	CDS	23646	24026	.	+	0	ID=cds-WP_002438111.1;Parent=gene-CP553_RS08060;Dbxref=GenBank:WP_002438111.1;Name=WP_002438111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS08060;product=PTS beta-glucoside transporter;protein_id=WP_002438111.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	24088	24855	.	+	.	ID=gene-CP553_RS08065;Name=CP553_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08065;old_locus_tag=CP553_08335
NZ_PCFD01000022.1	Protein Homology	CDS	24088	24855	.	+	0	ID=cds-WP_001832343.1;Parent=gene-CP553_RS08065;Dbxref=GenBank:WP_001832343.1;Name=WP_001832343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832343.1;locus_tag=CP553_RS08065;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001832343.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	24920	25972	.	-	.	ID=gene-CP553_RS08070;Name=CP553_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08070;old_locus_tag=CP553_08340
NZ_PCFD01000022.1	Protein Homology	CDS	24920	25972	.	-	0	ID=cds-WP_002456033.1;Parent=gene-CP553_RS08070;Dbxref=GenBank:WP_002456033.1;Name=WP_002456033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464505.1;locus_tag=CP553_RS08070;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_002456033.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	26195	26521	.	+	.	ID=gene-CP553_RS08075;Name=CP553_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08075;old_locus_tag=CP553_08345
NZ_PCFD01000022.1	Protein Homology	CDS	26195	26521	.	+	0	ID=cds-WP_002438113.1;Parent=gene-CP553_RS08075;Dbxref=GenBank:WP_002438113.1;Name=WP_002438113.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832372.1;locus_tag=CP553_RS08075;product=thioredoxin family protein;protein_id=WP_002438113.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	26704	27552	.	+	.	ID=gene-CP553_RS08080;Name=CP553_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08080;old_locus_tag=CP553_08350
NZ_PCFD01000022.1	Protein Homology	CDS	26704	27552	.	+	0	ID=cds-WP_001832362.1;Parent=gene-CP553_RS08080;Dbxref=GenBank:WP_001832362.1;Name=WP_001832362.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486450.1;locus_tag=CP553_RS08080;product=YitT family protein;protein_id=WP_001832362.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	27635	28615	.	+	.	ID=gene-CP553_RS08085;Name=CP553_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08085;old_locus_tag=CP553_08355
NZ_PCFD01000022.1	Protein Homology	CDS	27635	28615	.	+	0	ID=cds-WP_002438117.1;Parent=gene-CP553_RS08085;Dbxref=GenBank:WP_002438117.1;Name=WP_002438117.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474789.1;locus_tag=CP553_RS08085;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_002438117.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	28687	29004	.	-	.	ID=gene-CP553_RS08090;Name=CP553_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08090;old_locus_tag=CP553_08360
NZ_PCFD01000022.1	Protein Homology	CDS	28687	29004	.	-	0	ID=cds-WP_002438118.1;Parent=gene-CP553_RS08090;Dbxref=GenBank:WP_002438118.1;Name=WP_002438118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491129.1;locus_tag=CP553_RS08090;product=hypothetical protein;protein_id=WP_002438118.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	29455	30612	.	+	.	ID=gene-CP553_RS08095;Name=pgsB;gbkey=Gene;gene=pgsB;gene_biotype=protein_coding;locus_tag=CP553_RS08095;old_locus_tag=CP553_08365
NZ_PCFD01000022.1	Protein Homology	CDS	29455	30612	.	+	0	ID=cds-WP_002438119.1;Parent=gene-CP553_RS08095;Dbxref=GenBank:WP_002438119.1;Name=WP_002438119.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsB;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501535.1;locus_tag=CP553_RS08095;product=poly-gamma-glutamate synthase PgsB;protein_id=WP_002438119.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	30614	31066	.	+	.	ID=gene-CP553_RS08100;Name=pgsC;gbkey=Gene;gene=pgsC;gene_biotype=protein_coding;locus_tag=CP553_RS08100;old_locus_tag=CP553_08370
NZ_PCFD01000022.1	Protein Homology	CDS	30614	31066	.	+	0	ID=cds-WP_001832320.1;Parent=gene-CP553_RS08100;Dbxref=GenBank:WP_001832320.1;Name=WP_001832320.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsC;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175061.1;locus_tag=CP553_RS08100;product=poly-gamma-glutamate biosynthesis protein PgsC;protein_id=WP_001832320.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	31090	32163	.	+	.	ID=gene-CP553_RS08105;Name=CP553_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08105;old_locus_tag=CP553_08375
NZ_PCFD01000022.1	Protein Homology	CDS	31090	32163	.	+	0	ID=cds-WP_002438121.1;Parent=gene-CP553_RS08105;Dbxref=GenBank:WP_002438121.1;Name=WP_002438121.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438121.1;locus_tag=CP553_RS08105;product=CapA family protein;protein_id=WP_002438121.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	32153	32314	.	+	.	ID=gene-CP553_RS08110;Name=CP553_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08110;old_locus_tag=CP553_08380
NZ_PCFD01000022.1	Protein Homology	CDS	32153	32314	.	+	0	ID=cds-WP_001832373.1;Parent=gene-CP553_RS08110;Dbxref=GenBank:WP_001832373.1;Name=WP_001832373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469060.1;locus_tag=CP553_RS08110;product=hypothetical protein;protein_id=WP_001832373.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	32317	33921	.	+	.	ID=gene-CP553_RS08115;Name=CP553_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08115;old_locus_tag=CP553_08385
NZ_PCFD01000022.1	Protein Homology	CDS	32317	33921	.	+	0	ID=cds-WP_002438123.1;Parent=gene-CP553_RS08115;Dbxref=GenBank:WP_002438123.1;Name=WP_002438123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438123.1;locus_tag=CP553_RS08115;product=gamma-glutamyltransferase;protein_id=WP_002438123.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	34177	35058	.	+	.	ID=gene-CP553_RS08120;Name=rbsU;gbkey=Gene;gene=rbsU;gene_biotype=protein_coding;locus_tag=CP553_RS08120;old_locus_tag=CP553_08390
NZ_PCFD01000022.1	Protein Homology	CDS	34177	35058	.	+	0	ID=cds-WP_002438124.1;Parent=gene-CP553_RS08120;Dbxref=GenBank:WP_002438124.1;Name=WP_002438124.1;Ontology_term=GO:0015752,GO:0015591;gbkey=CDS;gene=rbsU;go_function=D-ribose transmembrane transporter activity|0015591||IEA;go_process=D-ribose transmembrane transport|0015752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498836.1;locus_tag=CP553_RS08120;product=ribose/proton symporter RbsU;protein_id=WP_002438124.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	35080	35484	.	+	.	ID=gene-CP553_RS08125;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=CP553_RS08125;old_locus_tag=CP553_08395
NZ_PCFD01000022.1	Protein Homology	CDS	35080	35484	.	+	0	ID=cds-WP_002438125.1;Parent=gene-CP553_RS08125;Dbxref=GenBank:WP_002438125.1;Name=WP_002438125.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498835.1;locus_tag=CP553_RS08125;product=D-ribose pyranase;protein_id=WP_002438125.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	35538	36461	.	+	.	ID=gene-CP553_RS08130;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=CP553_RS08130;old_locus_tag=CP553_08400
NZ_PCFD01000022.1	Protein Homology	CDS	35538	36461	.	+	0	ID=cds-WP_002438126.1;Parent=gene-CP553_RS08130;Dbxref=GenBank:WP_002438126.1;Name=WP_002438126.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503202.1;locus_tag=CP553_RS08130;product=ribokinase;protein_id=WP_002438126.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	36751	38241	.	+	.	ID=gene-CP553_RS08135;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=CP553_RS08135;old_locus_tag=CP553_08405
NZ_PCFD01000022.1	Protein Homology	CDS	36751	38241	.	+	0	ID=cds-WP_002438127.1;Parent=gene-CP553_RS08135;Dbxref=GenBank:WP_002438127.1;Name=WP_002438127.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362950.1;locus_tag=CP553_RS08135;product=xylulokinase;protein_id=WP_002438127.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	38515	39300	.	+	.	ID=gene-CP553_RS08140;Name=CP553_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08140;old_locus_tag=CP553_08410
NZ_PCFD01000022.1	Protein Homology	CDS	38515	39300	.	+	0	ID=cds-WP_002438128.1;Parent=gene-CP553_RS08140;Dbxref=GenBank:WP_002438128.1;Name=WP_002438128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505816.1;locus_tag=CP553_RS08140;product=hypothetical protein;protein_id=WP_002438128.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	39953	40996	.	+	.	ID=gene-CP553_RS08145;Name=CP553_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08145;old_locus_tag=CP553_08415
NZ_PCFD01000022.1	Protein Homology	CDS	39953	40996	.	+	0	ID=cds-WP_001832326.1;Parent=gene-CP553_RS08145;Dbxref=GenBank:WP_001832326.1;Name=WP_001832326.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503912.1;locus_tag=CP553_RS08145;product=PTS sugar transporter subunit IIC;protein_id=WP_001832326.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	40999	41679	.	+	.	ID=gene-CP553_RS08150;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=CP553_RS08150;old_locus_tag=CP553_08420
NZ_PCFD01000022.1	Protein Homology	CDS	40999	41679	.	+	0	ID=cds-WP_002458212.1;Parent=gene-CP553_RS08150;Dbxref=GenBank:WP_002458212.1;Name=WP_002458212.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458212.1;locus_tag=CP553_RS08150;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_002458212.1;transl_table=11
NZ_PCFD01000022.1	RefSeq	gene	41692	42591	.	+	.	ID=gene-CP553_RS08155;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=CP553_RS08155;old_locus_tag=CP553_08425
NZ_PCFD01000022.1	Protein Homology	CDS	41692	42591	.	+	0	ID=cds-WP_002438137.1;Parent=gene-CP553_RS08155;Dbxref=GenBank:WP_002438137.1;Name=WP_002438137.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364689.1;locus_tag=CP553_RS08155;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_002438137.1;transl_table=11
##sequence-region NZ_PCFD01000023.1 1 42163
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000023.1	RefSeq	region	1	42163	.	+	.	ID=NZ_PCFD01000023.1:1..42163;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000023.1	RefSeq	gene	99	172	.	+	.	ID=gene-CP553_RS08165;Name=CP553_RS08165;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS08165;old_locus_tag=CP553_08430
NZ_PCFD01000023.1	tRNAscan-SE	tRNA	99	172	.	+	.	ID=rna-CP553_RS08165;Parent=gene-CP553_RS08165;anticodon=(pos:133..135);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08165;product=tRNA-Arg
NZ_PCFD01000023.1	tRNAscan-SE	exon	99	172	.	+	.	ID=exon-CP553_RS08165-1;Parent=rna-CP553_RS08165;anticodon=(pos:133..135);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08165;product=tRNA-Arg
NZ_PCFD01000023.1	RefSeq	gene	519	1046	.	-	.	ID=gene-CP553_RS08170;Name=CP553_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08170;old_locus_tag=CP553_08435
NZ_PCFD01000023.1	Protein Homology	CDS	519	1046	.	-	0	ID=cds-WP_002469566.1;Parent=gene-CP553_RS08170;Dbxref=GenBank:WP_002469566.1;Name=WP_002469566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469566.1;locus_tag=CP553_RS08170;product=hypothetical protein;protein_id=WP_002469566.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	1744	2253	.	-	.	ID=gene-CP553_RS08175;Name=CP553_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08175;old_locus_tag=CP553_08440
NZ_PCFD01000023.1	Protein Homology	CDS	1744	2253	.	-	0	ID=cds-WP_001830180.1;Parent=gene-CP553_RS08175;Dbxref=GenBank:WP_001830180.1;Name=WP_001830180.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830180.1;locus_tag=CP553_RS08175;product=YfcE family phosphodiesterase;protein_id=WP_001830180.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	2246	2833	.	-	.	ID=gene-CP553_RS08180;Name=CP553_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08180;old_locus_tag=CP553_08445
NZ_PCFD01000023.1	Protein Homology	CDS	2246	2833	.	-	0	ID=cds-WP_001830169.1;Parent=gene-CP553_RS08180;Dbxref=GenBank:WP_001830169.1;Name=WP_001830169.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830169.1;locus_tag=CP553_RS08180;product=XTP/dITP diphosphatase;protein_id=WP_001830169.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	2848	3651	.	-	.	ID=gene-CP553_RS08185;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=CP553_RS08185;old_locus_tag=CP553_08450
NZ_PCFD01000023.1	Protein Homology	CDS	2848	3651	.	-	0	ID=cds-WP_001830094.1;Parent=gene-CP553_RS08185;Dbxref=GenBank:WP_001830094.1;Name=WP_001830094.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368075.1;locus_tag=CP553_RS08185;product=glutamate racemase;protein_id=WP_001830094.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	3814	4656	.	-	.	ID=gene-CP553_RS08190;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CP553_RS08190;old_locus_tag=CP553_08455
NZ_PCFD01000023.1	Protein Homology	CDS	3814	4656	.	-	0	ID=cds-WP_001830165.1;Parent=gene-CP553_RS08190;Dbxref=GenBank:WP_001830165.1;Name=WP_001830165.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499649.1;locus_tag=CP553_RS08190;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_001830165.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	4656	6422	.	-	.	ID=gene-CP553_RS08195;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=CP553_RS08195;old_locus_tag=CP553_08460
NZ_PCFD01000023.1	Protein Homology	CDS	4656	6422	.	-	0	ID=cds-WP_001830193.1;Parent=gene-CP553_RS08195;Dbxref=GenBank:WP_001830193.1;Name=WP_001830193.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499648.1;locus_tag=CP553_RS08195;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_001830193.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	6575	7189	.	-	.	ID=gene-CP553_RS08200;Name=CP553_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08200;old_locus_tag=CP553_08465
NZ_PCFD01000023.1	Protein Homology	CDS	6575	7189	.	-	0	ID=cds-WP_001830177.1;Parent=gene-CP553_RS08200;Dbxref=GenBank:WP_001830177.1;Name=WP_001830177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499647.1;locus_tag=CP553_RS08200;product=succinate dehydrogenase cytochrome b558 subunit;protein_id=WP_001830177.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	7330	7524	.	-	.	ID=gene-CP553_RS12820;Name=CP553_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12820;old_locus_tag=CP553_08470
NZ_PCFD01000023.1	Protein Homology	CDS	7330	7524	.	-	0	ID=cds-WP_002494433.1;Parent=gene-CP553_RS12820;Dbxref=GenBank:WP_002494433.1;Name=WP_002494433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498399.1;locus_tag=CP553_RS12820;product=hypothetical protein;protein_id=WP_002494433.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	7556	9340	.	-	.	ID=gene-CP553_RS08205;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=CP553_RS08205;old_locus_tag=CP553_08475
NZ_PCFD01000023.1	Protein Homology	CDS	7556	9340	.	-	0	ID=cds-WP_165798626.1;Parent=gene-CP553_RS08205;Dbxref=GenBank:WP_165798626.1;Name=WP_165798626.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830175.1;locus_tag=CP553_RS08205;product=excinuclease ABC subunit UvrC;protein_id=WP_165798626.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	9438	9752	.	-	.	ID=gene-CP553_RS08210;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=CP553_RS08210;old_locus_tag=CP553_08480
NZ_PCFD01000023.1	Protein Homology	CDS	9438	9752	.	-	0	ID=cds-WP_001830148.1;Parent=gene-CP553_RS08210;Dbxref=GenBank:WP_001830148.1;Name=WP_001830148.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499644.1;locus_tag=CP553_RS08210;product=thioredoxin;protein_id=WP_001830148.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	10011	12359	.	-	.	ID=gene-CP553_RS08215;Name=CP553_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08215;old_locus_tag=CP553_08485
NZ_PCFD01000023.1	Protein Homology	CDS	10011	12359	.	-	0	ID=cds-WP_002439388.1;Parent=gene-CP553_RS08215;Dbxref=GenBank:WP_002439388.1;Name=WP_002439388.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499643.1;locus_tag=CP553_RS08215;product=endonuclease MutS2;protein_id=WP_002439388.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	12369	14078	.	-	.	ID=gene-CP553_RS08220;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=CP553_RS08220;old_locus_tag=CP553_08490
NZ_PCFD01000023.1	Protein Homology	CDS	12369	14078	.	-	0	ID=cds-WP_002456232.1;Parent=gene-CP553_RS08220;Dbxref=GenBank:WP_002456232.1;Name=WP_002456232.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499642.1;locus_tag=CP553_RS08220;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_002456232.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	14153	14674	.	-	.	ID=gene-CP553_RS08225;Name=CP553_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08225;old_locus_tag=CP553_08495
NZ_PCFD01000023.1	Protein Homology	CDS	14153	14674	.	-	0	ID=cds-WP_116843004.1;Parent=gene-CP553_RS08225;Dbxref=GenBank:WP_116843004.1;Name=WP_116843004.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830147.1;locus_tag=CP553_RS08225;product=CvpA family protein;protein_id=WP_116843004.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	14675	14941	.	-	.	ID=gene-CP553_RS08230;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=CP553_RS08230;old_locus_tag=CP553_08500
NZ_PCFD01000023.1	Protein Homology	CDS	14675	14941	.	-	0	ID=cds-WP_001830081.1;Parent=gene-CP553_RS08230;Dbxref=GenBank:WP_001830081.1;Name=WP_001830081.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830081.1;locus_tag=CP553_RS08230;product=cell division protein ZapA;protein_id=WP_001830081.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	15195	16121	.	+	.	ID=gene-CP553_RS08235;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=CP553_RS08235;old_locus_tag=CP553_08505
NZ_PCFD01000023.1	Protein Homology	CDS	15195	16121	.	+	0	ID=cds-WP_002439378.1;Parent=gene-CP553_RS08235;Dbxref=GenBank:WP_002439378.1;Name=WP_002439378.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498403.1;locus_tag=CP553_RS08235;product=ribonuclease HIII;protein_id=WP_002439378.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	16173	18575	.	-	.	ID=gene-CP553_RS08240;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=CP553_RS08240;old_locus_tag=CP553_08510
NZ_PCFD01000023.1	Protein Homology	CDS	16173	18575	.	-	0	ID=cds-WP_002439376.1;Parent=gene-CP553_RS08240;Dbxref=GenBank:WP_002439376.1;Name=WP_002439376.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499638.1;locus_tag=CP553_RS08240;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_002439376.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	18575	19633	.	-	.	ID=gene-CP553_RS08245;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=CP553_RS08245;old_locus_tag=CP553_08515
NZ_PCFD01000023.1	Protein Homology	CDS	18575	19633	.	-	0	ID=cds-WP_116843005.1;Parent=gene-CP553_RS08245;Dbxref=GenBank:WP_116843005.1;Name=WP_116843005.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020367422.1;locus_tag=CP553_RS08245;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_116843005.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	20001	20741	.	-	.	ID=gene-CP553_RS08250;Name=CP553_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08250;old_locus_tag=CP553_08520
NZ_PCFD01000023.1	Protein Homology	CDS	20001	20741	.	-	0	ID=cds-WP_001830063.1;Parent=gene-CP553_RS08250;Dbxref=GenBank:WP_001830063.1;Name=WP_001830063.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476601.1;locus_tag=CP553_RS08250;product=TrmH family RNA methyltransferase;protein_id=WP_001830063.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	21080	23491	.	+	.	ID=gene-CP553_RS08255;Name=CP553_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08255;old_locus_tag=CP553_08530
NZ_PCFD01000023.1	Protein Homology	CDS	21080	23491	.	+	0	ID=cds-WP_064659101.1;Parent=gene-CP553_RS08255;Dbxref=GenBank:WP_064659101.1;Name=WP_064659101.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485785.1;locus_tag=CP553_RS08255;product=YSIRK-type signal peptide-containing protein;protein_id=WP_064659101.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	23971	24144	.	-	.	ID=gene-CP553_RS08260;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=CP553_RS08260;old_locus_tag=CP553_08535
NZ_PCFD01000023.1	Protein Homology	CDS	23971	24144	.	-	0	ID=cds-WP_001830121.1;Parent=gene-CP553_RS08260;Dbxref=GenBank:WP_001830121.1;Name=WP_001830121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469283.1;locus_tag=CP553_RS08260;product=50S ribosomal protein L32;protein_id=WP_001830121.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	24222	24776	.	-	.	ID=gene-CP553_RS08265;Name=CP553_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08265;old_locus_tag=CP553_08545
NZ_PCFD01000023.1	Protein Homology	CDS	24222	24776	.	-	0	ID=cds-WP_001830128.1;Parent=gene-CP553_RS08265;Dbxref=GenBank:WP_001830128.1;Name=WP_001830128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499623.1;locus_tag=CP553_RS08265;product=YceD family protein;protein_id=WP_001830128.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	24903	26036	.	+	.	ID=gene-CP553_RS08270;Name=CP553_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08270;old_locus_tag=CP553_08550
NZ_PCFD01000023.1	Protein Homology	CDS	24903	26036	.	+	0	ID=cds-WP_001830136.1;Parent=gene-CP553_RS08270;Dbxref=GenBank:WP_001830136.1;Name=WP_001830136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362783.1;locus_tag=CP553_RS08270;product=nucleotidyltransferase;protein_id=WP_001830136.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	26440	26925	.	-	.	ID=gene-CP553_RS08275;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=CP553_RS08275;old_locus_tag=CP553_08555
NZ_PCFD01000023.1	Protein Homology	CDS	26440	26925	.	-	0	ID=cds-WP_001830072.1;Parent=gene-CP553_RS08275;Dbxref=GenBank:WP_001830072.1;Name=WP_001830072.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498243.1;locus_tag=CP553_RS08275;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001830072.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	26927	27469	.	-	.	ID=gene-CP553_RS08280;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=CP553_RS08280;old_locus_tag=CP553_08560
NZ_PCFD01000023.1	Protein Homology	CDS	26927	27469	.	-	0	ID=cds-WP_001830140.1;Parent=gene-CP553_RS08280;Dbxref=GenBank:WP_001830140.1;Name=WP_001830140.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470236.1;locus_tag=CP553_RS08280;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_001830140.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	27536	27925	.	+	.	ID=gene-CP553_RS08285;Name=CP553_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08285;old_locus_tag=CP553_08565
NZ_PCFD01000023.1	Protein Homology	CDS	27536	27925	.	+	0	ID=cds-WP_001830114.1;Parent=gene-CP553_RS08285;Dbxref=GenBank:WP_001830114.1;Name=WP_001830114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457429.1;locus_tag=CP553_RS08285;product=DUF7147 family protein;protein_id=WP_001830114.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	27935	28186	.	-	.	ID=gene-CP553_RS08290;Name=CP553_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08290;old_locus_tag=CP553_08570
NZ_PCFD01000023.1	Protein Homology	CDS	27935	28186	.	-	0	ID=cds-WP_002439362.1;Parent=gene-CP553_RS08290;Dbxref=GenBank:WP_002439362.1;Name=WP_002439362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439362.1;locus_tag=CP553_RS08290;product=DUF2129 domain-containing protein;protein_id=WP_002439362.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	28407	29333	.	+	.	ID=gene-CP553_RS08295;Name=CP553_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08295;old_locus_tag=CP553_08580
NZ_PCFD01000023.1	Protein Homology	CDS	28407	29333	.	+	0	ID=cds-WP_001830132.1;Parent=gene-CP553_RS08295;Dbxref=GenBank:WP_001830132.1;Name=WP_001830132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464283.1;locus_tag=CP553_RS08295;product=glycerophosphodiester phosphodiesterase;protein_id=WP_001830132.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	29848	30282	.	-	.	ID=gene-CP553_RS08300;Name=CP553_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08300;old_locus_tag=CP553_08585
NZ_PCFD01000023.1	Protein Homology	CDS	29848	30282	.	-	0	ID=cds-WP_001830091.1;Parent=gene-CP553_RS08300;Dbxref=GenBank:WP_001830091.1;Name=WP_001830091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830091.1;locus_tag=CP553_RS08300;product=YlbF family regulator;protein_id=WP_001830091.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	30303	31355	.	-	.	ID=gene-CP553_RS08305;Name=CP553_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08305;old_locus_tag=CP553_08590
NZ_PCFD01000023.1	Protein Homology	CDS	30303	31355	.	-	0	ID=cds-WP_001830119.1;Parent=gene-CP553_RS08305;Dbxref=GenBank:WP_001830119.1;Name=WP_001830119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830119.1;locus_tag=CP553_RS08305;product=CAP-associated domain-containing protein;protein_id=WP_001830119.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	31797	32258	.	-	.	ID=gene-CP553_RS08310;Name=CP553_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08310;old_locus_tag=CP553_08595
NZ_PCFD01000023.1	Protein Homology	CDS	31797	32258	.	-	0	ID=cds-WP_001830117.1;Parent=gene-CP553_RS08310;Dbxref=GenBank:WP_001830117.1;Name=WP_001830117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457433.1;locus_tag=CP553_RS08310;product=DUF420 domain-containing protein;protein_id=WP_001830117.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	32284	33195	.	-	.	ID=gene-CP553_RS08315;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=CP553_RS08315;old_locus_tag=CP553_08600
NZ_PCFD01000023.1	Protein Homology	CDS	32284	33195	.	-	0	ID=cds-WP_001830186.1;Parent=gene-CP553_RS08315;Dbxref=GenBank:WP_001830186.1;Name=WP_001830186.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499612.1;locus_tag=CP553_RS08315;product=heme o synthase;protein_id=WP_001830186.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	33496	34404	.	+	.	ID=gene-CP553_RS08320;Name=CP553_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08320;old_locus_tag=CP553_08605
NZ_PCFD01000023.1	Protein Homology	CDS	33496	34404	.	+	0	ID=cds-WP_001830131.1;Parent=gene-CP553_RS08320;Dbxref=GenBank:WP_001830131.1;Name=WP_001830131.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464280.1;locus_tag=CP553_RS08320;product=COX15/CtaA family protein;protein_id=WP_001830131.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	34547	37996	.	-	.	ID=gene-CP553_RS08325;Name=CP553_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08325;old_locus_tag=CP553_08610
NZ_PCFD01000023.1	Protein Homology	CDS	34547	37996	.	-	0	ID=cds-WP_001830192.1;Parent=gene-CP553_RS08325;Dbxref=GenBank:WP_001830192.1;Name=WP_001830192.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470251.1;locus_tag=CP553_RS08325;product=pyruvate carboxylase;protein_id=WP_001830192.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	38398	39621	.	-	.	ID=gene-CP553_RS08330;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=CP553_RS08330;old_locus_tag=CP553_08615
NZ_PCFD01000023.1	Protein Homology	CDS	38398	39621	.	-	0	ID=cds-WP_001830097.1;Parent=gene-CP553_RS08330;Dbxref=GenBank:WP_001830097.1;Name=WP_001830097.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473270.1;locus_tag=CP553_RS08330;product=cell division peptidoglycan polymerase FtsW;protein_id=WP_001830097.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	40023	40298	.	-	.	ID=gene-CP553_RS08335;Name=CP553_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08335;old_locus_tag=CP553_08620
NZ_PCFD01000023.1	Protein Homology	CDS	40023	40298	.	-	0	ID=cds-WP_001830079.1;Parent=gene-CP553_RS08335;Dbxref=GenBank:WP_001830079.1;Name=WP_001830079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830079.1;locus_tag=CP553_RS08335;product=YlaN family protein;protein_id=WP_001830079.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	40443	40925	.	+	.	ID=gene-CP553_RS08340;Name=CP553_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08340;old_locus_tag=CP553_08625
NZ_PCFD01000023.1	Protein Homology	CDS	40443	40925	.	+	0	ID=cds-WP_001830171.1;Parent=gene-CP553_RS08340;Dbxref=GenBank:WP_001830171.1;Name=WP_001830171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473266.1;locus_tag=CP553_RS08340;product=hypothetical protein;protein_id=WP_001830171.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	40927	41082	.	+	.	ID=gene-CP553_RS08345;Name=CP553_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08345;old_locus_tag=CP553_08630
NZ_PCFD01000023.1	Protein Homology	CDS	40927	41082	.	+	0	ID=cds-WP_002439348.1;Parent=gene-CP553_RS08345;Dbxref=GenBank:WP_002439348.1;Name=WP_002439348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439348.1;locus_tag=CP553_RS08345;product=DUF2197 domain-containing protein;protein_id=WP_002439348.1;transl_table=11
NZ_PCFD01000023.1	RefSeq	pseudogene	41101	41476	.	-	.	ID=gene-CP553_RS13075;Name=CP553_RS13075;end_range=41476,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS13075;partial=true;pseudo=true
NZ_PCFD01000023.1	Protein Homology	CDS	41101	41476	.	-	0	ID=cds-CP553_RS13075;Parent=gene-CP553_RS13075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=41476,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082549.1;locus_tag=CP553_RS13075;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_PCFD01000023.1	RefSeq	gene	41552	41770	.	-	.	ID=gene-CP553_RS13080;Name=CP553_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS13080
NZ_PCFD01000023.1	GeneMarkS-2+	CDS	41552	41770	.	-	0	ID=cds-WP_001832249.1;Parent=gene-CP553_RS13080;Dbxref=GenBank:WP_001832249.1;Name=WP_001832249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS13080;product=transposase;protein_id=WP_001832249.1;transl_table=11
##sequence-region NZ_PCFD01000024.1 1 41897
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000024.1	RefSeq	region	1	41897	.	+	.	ID=NZ_PCFD01000024.1:1..41897;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000024.1	RefSeq	gene	293	469	.	+	.	ID=gene-CP553_RS08355;Name=CP553_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08355;old_locus_tag=CP553_08640
NZ_PCFD01000024.1	Protein Homology	CDS	293	469	.	+	0	ID=cds-WP_002438139.1;Parent=gene-CP553_RS08355;Dbxref=GenBank:WP_002438139.1;Name=WP_002438139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447106.1;locus_tag=CP553_RS08355;product=hypothetical protein;protein_id=WP_002438139.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	533	1027	.	-	.	ID=gene-CP553_RS08360;Name=CP553_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08360;old_locus_tag=CP553_08645
NZ_PCFD01000024.1	Protein Homology	CDS	533	1027	.	-	0	ID=cds-WP_002438140.1;Parent=gene-CP553_RS08360;Dbxref=GenBank:WP_002438140.1;Name=WP_002438140.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363264.1;locus_tag=CP553_RS08360;product=GNAT family N-acetyltransferase;protein_id=WP_002438140.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	1203	1814	.	+	.	ID=gene-CP553_RS08365;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=CP553_RS08365;old_locus_tag=CP553_08650
NZ_PCFD01000024.1	Protein Homology	CDS	1203	1814	.	+	0	ID=cds-WP_002438141.1;Parent=gene-CP553_RS08365;Dbxref=GenBank:WP_002438141.1;Name=WP_002438141.1;gbkey=CDS;gene=srtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438141.1;locus_tag=CP553_RS08365;product=class A sortase SrtA;protein_id=WP_002438141.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	2159	2968	.	+	.	ID=gene-CP553_RS08370;Name=CP553_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08370;old_locus_tag=CP553_08655
NZ_PCFD01000024.1	Protein Homology	CDS	2159	2968	.	+	0	ID=cds-WP_002438142.1;Parent=gene-CP553_RS08370;Dbxref=GenBank:WP_002438142.1;Name=WP_002438142.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831422.1;locus_tag=CP553_RS08370;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_002438142.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	3155	4147	.	-	.	ID=gene-CP553_RS08375;Name=CP553_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08375;old_locus_tag=CP553_08660
NZ_PCFD01000024.1	Protein Homology	CDS	3155	4147	.	-	0	ID=cds-WP_002438143.1;Parent=gene-CP553_RS08375;Dbxref=GenBank:WP_002438143.1;Name=WP_002438143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456690.1;locus_tag=CP553_RS08375;product=D-lactate dehydrogenase;protein_id=WP_002438143.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	4394	5056	.	+	.	ID=gene-CP553_RS08380;Name=CP553_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08380;old_locus_tag=CP553_08665
NZ_PCFD01000024.1	Protein Homology	CDS	4394	5056	.	+	0	ID=cds-WP_002438144.1;Parent=gene-CP553_RS08380;Dbxref=GenBank:WP_002438144.1;Name=WP_002438144.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505538.1;locus_tag=CP553_RS08380;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_002438144.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	5434	6927	.	+	.	ID=gene-CP553_RS08385;Name=CP553_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08385;old_locus_tag=CP553_08675
NZ_PCFD01000024.1	Protein Homology	CDS	5434	6927	.	+	0	ID=cds-WP_002438147.1;Parent=gene-CP553_RS08385;Dbxref=GenBank:WP_002438147.1;Name=WP_002438147.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501529.1;locus_tag=CP553_RS08385;product=aldehyde dehydrogenase family protein;protein_id=WP_002438147.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	pseudogene	7128	7430	.	+	.	ID=gene-CP553_RS13005;Name=CP553_RS13005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS13005;old_locus_tag=CP553_08680;pseudo=true
NZ_PCFD01000024.1	Protein Homology	CDS	7128	7430	.	+	0	ID=cds-CP553_RS13005;Parent=gene-CP553_RS13005;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458205.1;locus_tag=CP553_RS13005;product=NINE protein;pseudo=true;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	7871	8668	.	-	.	ID=gene-CP553_RS08390;Name=CP553_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08390;old_locus_tag=CP553_08685
NZ_PCFD01000024.1	Protein Homology	CDS	7871	8668	.	-	0	ID=cds-WP_002438150.1;Parent=gene-CP553_RS08390;Dbxref=GenBank:WP_002438150.1;Name=WP_002438150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834593.1;locus_tag=CP553_RS08390;product=VOC family protein;protein_id=WP_002438150.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	8930	9211	.	-	.	ID=gene-CP553_RS08395;Name=CP553_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08395;old_locus_tag=CP553_08690
NZ_PCFD01000024.1	Protein Homology	CDS	8930	9211	.	-	0	ID=cds-WP_001831535.1;Parent=gene-CP553_RS08395;Dbxref=GenBank:WP_001831535.1;Name=WP_001831535.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360598.1;locus_tag=CP553_RS08395;product=GNAT family N-acetyltransferase;protein_id=WP_001831535.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	pseudogene	9378	10325	.	+	.	ID=gene-CP553_RS08400;Name=CP553_RS08400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS08400;old_locus_tag=CP553_08695;pseudo=true
NZ_PCFD01000024.1	Protein Homology	CDS	9378	10325	.	+	0	ID=cds-CP553_RS08400;Parent=gene-CP553_RS08400;Note=internal stop;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489507.1;locus_tag=CP553_RS08400;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;pseudo=true;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	10396	11820	.	-	.	ID=gene-CP553_RS08405;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=CP553_RS08405;old_locus_tag=CP553_08700
NZ_PCFD01000024.1	Protein Homology	CDS	10396	11820	.	-	0	ID=cds-WP_002456035.1;Parent=gene-CP553_RS08405;Dbxref=GenBank:WP_002456035.1;Name=WP_002456035.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484955.1;locus_tag=CP553_RS08405;product=aldehyde dehydrogenase;protein_id=WP_002456035.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	12069	13118	.	-	.	ID=gene-CP553_RS08410;Name=CP553_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08410;old_locus_tag=CP553_08705
NZ_PCFD01000024.1	Protein Homology	CDS	12069	13118	.	-	0	ID=cds-WP_002438159.1;Parent=gene-CP553_RS08410;Dbxref=GenBank:WP_002438159.1;Name=WP_002438159.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491025.1;locus_tag=CP553_RS08410;product=YkvI family membrane protein;protein_id=WP_002438159.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	13466	15253	.	+	.	ID=gene-CP553_RS08415;Name=CP553_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08415;old_locus_tag=CP553_08715
NZ_PCFD01000024.1	Protein Homology	CDS	13466	15253	.	+	0	ID=cds-WP_002456036.1;Parent=gene-CP553_RS08415;Dbxref=GenBank:WP_002456036.1;Name=WP_002456036.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456683.1;locus_tag=CP553_RS08415;product=cation:proton antiporter;protein_id=WP_002456036.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	15476	17440	.	-	.	ID=gene-CP553_RS08420;Name=CP553_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08420;old_locus_tag=CP553_08720
NZ_PCFD01000024.1	Protein Homology	CDS	15476	17440	.	-	0	ID=cds-WP_002438166.1;Parent=gene-CP553_RS08420;Dbxref=GenBank:WP_002438166.1;Name=WP_002438166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498462.1;locus_tag=CP553_RS08420;product=fructose-1%2C6-bisphosphatase;protein_id=WP_002438166.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	17614	18228	.	-	.	ID=gene-CP553_RS08425;Name=CP553_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08425;old_locus_tag=CP553_08725
NZ_PCFD01000024.1	Protein Homology	CDS	17614	18228	.	-	0	ID=cds-WP_001831584.1;Parent=gene-CP553_RS08425;Dbxref=GenBank:WP_001831584.1;Name=WP_001831584.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464518.1;locus_tag=CP553_RS08425;product=DedA family protein;protein_id=WP_001831584.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	18336	19334	.	-	.	ID=gene-CP553_RS08430;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=CP553_RS08430;old_locus_tag=CP553_08730
NZ_PCFD01000024.1	Protein Homology	CDS	18336	19334	.	-	0	ID=cds-WP_001831616.1;Parent=gene-CP553_RS08430;Dbxref=GenBank:WP_001831616.1;Name=WP_001831616.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502579.1;locus_tag=CP553_RS08430;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_001831616.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	19336	20103	.	-	.	ID=gene-CP553_RS08435;Name=CP553_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08435;old_locus_tag=CP553_08735
NZ_PCFD01000024.1	Protein Homology	CDS	19336	20103	.	-	0	ID=cds-WP_001831506.1;Parent=gene-CP553_RS08435;Dbxref=GenBank:WP_001831506.1;Name=WP_001831506.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901320.1;locus_tag=CP553_RS08435;product=thiazole synthase;protein_id=WP_001831506.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	20105	20305	.	-	.	ID=gene-CP553_RS08440;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=CP553_RS08440;old_locus_tag=CP553_08740
NZ_PCFD01000024.1	Protein Homology	CDS	20105	20305	.	-	0	ID=cds-WP_001831588.1;Parent=gene-CP553_RS08440;Dbxref=GenBank:WP_001831588.1;Name=WP_001831588.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464520.1;locus_tag=CP553_RS08440;product=sulfur carrier protein ThiS;protein_id=WP_001831588.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	20289	21407	.	-	.	ID=gene-CP553_RS08445;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=CP553_RS08445;old_locus_tag=CP553_08745
NZ_PCFD01000024.1	Protein Homology	CDS	20289	21407	.	-	0	ID=cds-WP_002438170.1;Parent=gene-CP553_RS08445;Dbxref=GenBank:WP_002438170.1;Name=WP_002438170.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502578.1;locus_tag=CP553_RS08445;product=glycine oxidase ThiO;protein_id=WP_002438170.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	21400	21999	.	-	.	ID=gene-CP553_RS08450;Name=CP553_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08450;old_locus_tag=CP553_08750
NZ_PCFD01000024.1	Protein Homology	CDS	21400	21999	.	-	0	ID=cds-WP_002438172.1;Parent=gene-CP553_RS08450;Dbxref=GenBank:WP_002438172.1;Name=WP_002438172.1;Ontology_term=GO:0009228,GO:0009229,GO:0000287,GO:0004789;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA,thiamine diphosphate biosynthetic process|0009229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503351.1;locus_tag=CP553_RS08450;product=thiamine phosphate synthase;protein_id=WP_002438172.1;transl_table=11
NZ_PCFD01000024.1	cmsearch	riboswitch	22069	22178	.	-	.	ID=id-NZ_PCFD01000024.1:22069..22178;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000024.1	RefSeq	gene	22671	23945	.	+	.	ID=gene-CP553_RS08455;Name=CP553_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08455;old_locus_tag=CP553_08755
NZ_PCFD01000024.1	Protein Homology	CDS	22671	23945	.	+	0	ID=cds-WP_002438175.1;Parent=gene-CP553_RS08455;Dbxref=GenBank:WP_002438175.1;Name=WP_002438175.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501521.1;locus_tag=CP553_RS08455;product=MFS transporter;protein_id=WP_002438175.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	24098	24388	.	+	.	ID=gene-CP553_RS08460;Name=CP553_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08460;old_locus_tag=CP553_08760
NZ_PCFD01000024.1	Protein Homology	CDS	24098	24388	.	+	0	ID=cds-WP_002438178.1;Parent=gene-CP553_RS08460;Dbxref=GenBank:WP_002438178.1;Name=WP_002438178.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438178.1;locus_tag=CP553_RS08460;product=putative quinol monooxygenase;protein_id=WP_002438178.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	24550	26466	.	+	.	ID=gene-CP553_RS08465;Name=CP553_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08465;old_locus_tag=CP553_08765
NZ_PCFD01000024.1	Protein Homology	CDS	24550	26466	.	+	0	ID=cds-WP_001831490.1;Parent=gene-CP553_RS08465;Dbxref=GenBank:WP_001831490.1;Name=WP_001831490.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505410.1;locus_tag=CP553_RS08465;product=FUSC family protein;protein_id=WP_001831490.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	26544	26957	.	+	.	ID=gene-CP553_RS08470;Name=CP553_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08470;old_locus_tag=CP553_08770
NZ_PCFD01000024.1	Protein Homology	CDS	26544	26957	.	+	0	ID=cds-WP_002438182.1;Parent=gene-CP553_RS08470;Dbxref=GenBank:WP_002438182.1;Name=WP_002438182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447130.1;locus_tag=CP553_RS08470;product=DUF2188 domain-containing protein;protein_id=WP_002438182.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	27225	27926	.	+	.	ID=gene-CP553_RS08475;Name=CP553_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08475;old_locus_tag=CP553_08775
NZ_PCFD01000024.1	Protein Homology	CDS	27225	27926	.	+	0	ID=cds-WP_002438184.1;Parent=gene-CP553_RS08475;Dbxref=GenBank:WP_002438184.1;Name=WP_002438184.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458189.1;locus_tag=CP553_RS08475;product=GTP pyrophosphokinase;protein_id=WP_002438184.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	28046	28963	.	-	.	ID=gene-CP553_RS08480;Name=CP553_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08480;old_locus_tag=CP553_08780
NZ_PCFD01000024.1	Protein Homology	CDS	28046	28963	.	-	0	ID=cds-WP_002456038.1;Parent=gene-CP553_RS08480;Dbxref=GenBank:WP_002456038.1;Name=WP_002456038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489485.1;locus_tag=CP553_RS08480;product=phosphatase PAP2 family protein;protein_id=WP_002456038.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	29269	30144	.	+	.	ID=gene-CP553_RS08485;Name=CP553_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08485;old_locus_tag=CP553_08785
NZ_PCFD01000024.1	Protein Homology	CDS	29269	30144	.	+	0	ID=cds-WP_002456039.1;Parent=gene-CP553_RS08485;Dbxref=GenBank:WP_002456039.1;Name=WP_002456039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495957.1;locus_tag=CP553_RS08485;product=alpha/beta fold hydrolase;protein_id=WP_002456039.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	30230	30946	.	+	.	ID=gene-CP553_RS08490;Name=CP553_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08490;old_locus_tag=CP553_08795
NZ_PCFD01000024.1	Protein Homology	CDS	30230	30946	.	+	0	ID=cds-WP_002438191.1;Parent=gene-CP553_RS08490;Dbxref=GenBank:WP_002438191.1;Name=WP_002438191.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502576.1;locus_tag=CP553_RS08490;product=MerR family transcriptional regulator;protein_id=WP_002438191.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	31104	32462	.	-	.	ID=gene-CP553_RS08495;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=CP553_RS08495;old_locus_tag=CP553_08800
NZ_PCFD01000024.1	Protein Homology	CDS	31104	32462	.	-	0	ID=cds-WP_001831473.1;Parent=gene-CP553_RS08495;Dbxref=GenBank:WP_001831473.1;Name=WP_001831473.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505810.1;locus_tag=CP553_RS08495;product=glycerol-3-phosphate transporter;protein_id=WP_001831473.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	32830	33510	.	+	.	ID=gene-CP553_RS08500;Name=CP553_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08500;old_locus_tag=CP553_08805
NZ_PCFD01000024.1	Protein Homology	CDS	32830	33510	.	+	0	ID=cds-WP_002438193.1;Parent=gene-CP553_RS08500;Dbxref=GenBank:WP_002438193.1;Name=WP_002438193.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486425.1;locus_tag=CP553_RS08500;product=GntR family transcriptional regulator;protein_id=WP_002438193.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	33534	35075	.	+	.	ID=gene-CP553_RS08505;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=CP553_RS08505;old_locus_tag=CP553_08810
NZ_PCFD01000024.1	Protein Homology	CDS	33534	35075	.	+	0	ID=cds-WP_002438195.1;Parent=gene-CP553_RS08505;Dbxref=GenBank:WP_002438195.1;Name=WP_002438195.1;Ontology_term=GO:0009255,GO:0019521,GO:0046316;gbkey=CDS;gene=gntK;go_function=gluconokinase activity|0046316||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959279.1;locus_tag=CP553_RS08505;product=gluconokinase;protein_id=WP_002438195.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	35125	36483	.	+	.	ID=gene-CP553_RS08510;Name=CP553_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08510;old_locus_tag=CP553_08815
NZ_PCFD01000024.1	Protein Homology	CDS	35125	36483	.	+	0	ID=cds-WP_001831451.1;Parent=gene-CP553_RS08510;Dbxref=GenBank:WP_001831451.1;Name=WP_001831451.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501265.1;locus_tag=CP553_RS08510;product=gluconate:H+ symporter;protein_id=WP_001831451.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	36732	37598	.	+	.	ID=gene-CP553_RS08515;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=CP553_RS08515;old_locus_tag=CP553_08820
NZ_PCFD01000024.1	Protein Homology	CDS	36732	37598	.	+	0	ID=cds-WP_001831553.1;Parent=gene-CP553_RS08515;Dbxref=GenBank:WP_001831553.1;Name=WP_001831553.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831553.1;locus_tag=CP553_RS08515;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_001831553.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	37813	39453	.	-	.	ID=gene-CP553_RS08520;Name=CP553_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08520;old_locus_tag=CP553_08825
NZ_PCFD01000024.1	Protein Homology	CDS	37813	39453	.	-	0	ID=cds-WP_002438201.1;Parent=gene-CP553_RS08520;Dbxref=GenBank:WP_002438201.1;Name=WP_002438201.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113887.1;locus_tag=CP553_RS08520;product=phospho-sugar mutase;protein_id=WP_002438201.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	39671	41161	.	+	.	ID=gene-CP553_RS08525;Name=CP553_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08525;old_locus_tag=CP553_08830
NZ_PCFD01000024.1	Protein Homology	CDS	39671	41161	.	+	0	ID=cds-WP_002456041.1;Parent=gene-CP553_RS08525;Dbxref=GenBank:WP_002456041.1;Name=WP_002456041.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493294.1;locus_tag=CP553_RS08525;product=glycosyltransferase;protein_id=WP_002456041.1;transl_table=11
NZ_PCFD01000024.1	RefSeq	gene	41443	41897	.	+	.	ID=gene-CP553_RS08530;Name=CP553_RS08530;end_range=41897,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08530;old_locus_tag=CP553_08835;partial=true
NZ_PCFD01000024.1	Protein Homology	CDS	41443	41897	.	+	0	ID=cds-WP_116843007.1;Parent=gene-CP553_RS08530;Dbxref=GenBank:WP_116843007.1;Name=WP_116843007.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;end_range=41897,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464532.1;locus_tag=CP553_RS08530;partial=true;product=DNA cytosine methyltransferase;protein_id=WP_116843007.1;transl_table=11
##sequence-region NZ_PCFD01000025.1 1 40463
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000025.1	RefSeq	region	1	40463	.	+	.	ID=NZ_PCFD01000025.1:1..40463;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000025.1	RefSeq	gene	1	517	.	+	.	ID=gene-CP553_RS08535;Name=CP553_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08535;old_locus_tag=CP553_08840;partial=true;start_range=.,1
NZ_PCFD01000025.1	Protein Homology	CDS	1	517	.	+	1	ID=cds-WP_197315231.1;Parent=gene-CP553_RS08535;Dbxref=GenBank:WP_197315231.1;Name=WP_197315231.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464532.1;locus_tag=CP553_RS08535;partial=true;product=DNA cytosine methyltransferase;protein_id=WP_197315231.1;start_range=.,1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	517	1521	.	+	.	ID=gene-CP553_RS08540;Name=CP553_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08540;old_locus_tag=CP553_08845
NZ_PCFD01000025.1	Protein Homology	CDS	517	1521	.	+	0	ID=cds-WP_002438208.1;Parent=gene-CP553_RS08540;Dbxref=GenBank:WP_002438208.1;Name=WP_002438208.1;Ontology_term=GO:0009307,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438208.1;locus_tag=CP553_RS08540;product=DNA adenine methylase;protein_id=WP_002438208.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	1583	2743	.	+	.	ID=gene-CP553_RS08545;Name=CP553_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08545;old_locus_tag=CP553_08850
NZ_PCFD01000025.1	Protein Homology	CDS	1583	2743	.	+	0	ID=cds-WP_002438209.1;Parent=gene-CP553_RS08545;Dbxref=GenBank:WP_002438209.1;Name=WP_002438209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438209.1;locus_tag=CP553_RS08545;product=HNH endonuclease;protein_id=WP_002438209.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	2844	3035	.	+	.	ID=gene-CP553_RS08550;Name=CP553_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08550;old_locus_tag=CP553_08855
NZ_PCFD01000025.1	Protein Homology	CDS	2844	3035	.	+	0	ID=cds-WP_001831457.1;Parent=gene-CP553_RS08550;Dbxref=GenBank:WP_001831457.1;Name=WP_001831457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501241.1;locus_tag=CP553_RS08550;product=hypothetical protein;protein_id=WP_001831457.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	3318	3614	.	-	.	ID=gene-CP553_RS08555;Name=CP553_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08555;old_locus_tag=CP553_08860
NZ_PCFD01000025.1	Protein Homology	CDS	3318	3614	.	-	0	ID=cds-WP_002438212.1;Parent=gene-CP553_RS08555;Dbxref=GenBank:WP_002438212.1;Name=WP_002438212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458177.1;locus_tag=CP553_RS08555;product=DUF1413 domain-containing protein;protein_id=WP_002438212.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	3802	4494	.	+	.	ID=gene-CP553_RS08560;Name=CP553_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08560;old_locus_tag=CP553_08865
NZ_PCFD01000025.1	Protein Homology	CDS	3802	4494	.	+	0	ID=cds-WP_002438215.1;Parent=gene-CP553_RS08560;Dbxref=GenBank:WP_002438215.1;Name=WP_002438215.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499073.1;locus_tag=CP553_RS08560;product=SDR family oxidoreductase;protein_id=WP_002438215.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	4583	5839	.	+	.	ID=gene-CP553_RS08565;Name=CP553_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08565;old_locus_tag=CP553_08870
NZ_PCFD01000025.1	Protein Homology	CDS	4583	5839	.	+	0	ID=cds-WP_002438217.1;Parent=gene-CP553_RS08565;Dbxref=GenBank:WP_002438217.1;Name=WP_002438217.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438217.1;locus_tag=CP553_RS08565;product=acetylornithine deacetylase;protein_id=WP_002438217.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	6006	8171	.	-	.	ID=gene-CP553_RS08570;Name=CP553_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08570;old_locus_tag=CP553_08875
NZ_PCFD01000025.1	Protein Homology	CDS	6006	8171	.	-	0	ID=cds-WP_002456043.1;Parent=gene-CP553_RS08570;Dbxref=GenBank:WP_002456043.1;Name=WP_002456043.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274912.1;locus_tag=CP553_RS08570;product=RNA degradosome polyphosphate kinase;protein_id=WP_002456043.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	8234	9766	.	-	.	ID=gene-CP553_RS08575;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=CP553_RS08575;old_locus_tag=CP553_08880
NZ_PCFD01000025.1	Protein Homology	CDS	8234	9766	.	-	0	ID=cds-WP_002438222.1;Parent=gene-CP553_RS08575;Dbxref=GenBank:WP_002438222.1;Name=WP_002438222.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361298.1;locus_tag=CP553_RS08575;product=exopolyphosphatase;protein_id=WP_002438222.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	10079	10897	.	+	.	ID=gene-CP553_RS08580;Name=CP553_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08580;old_locus_tag=CP553_08885
NZ_PCFD01000025.1	Protein Homology	CDS	10079	10897	.	+	0	ID=cds-WP_002438224.1;Parent=gene-CP553_RS08580;Dbxref=GenBank:WP_002438224.1;Name=WP_002438224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503368.1;locus_tag=CP553_RS08580;product=SDR family oxidoreductase;protein_id=WP_002438224.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	11059	11247	.	-	.	ID=gene-CP553_RS08585;Name=CP553_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08585;old_locus_tag=CP553_08890
NZ_PCFD01000025.1	Protein Homology	CDS	11059	11247	.	-	0	ID=cds-WP_116843008.1;Parent=gene-CP553_RS08585;Dbxref=GenBank:WP_116843008.1;Name=WP_116843008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505409.1;locus_tag=CP553_RS08585;product=hypothetical protein;protein_id=WP_116843008.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	11264	12340	.	-	.	ID=gene-CP553_RS08590;Name=CP553_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08590;old_locus_tag=CP553_08895
NZ_PCFD01000025.1	Protein Homology	CDS	11264	12340	.	-	0	ID=cds-WP_002456044.1;Parent=gene-CP553_RS08590;Dbxref=GenBank:WP_002456044.1;Name=WP_002456044.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501214.1;locus_tag=CP553_RS08590;product=M42 family metallopeptidase;protein_id=WP_002456044.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	12524	12991	.	+	.	ID=gene-CP553_RS08595;Name=CP553_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08595;old_locus_tag=CP553_08900
NZ_PCFD01000025.1	Protein Homology	CDS	12524	12991	.	+	0	ID=cds-WP_002438231.1;Parent=gene-CP553_RS08595;Dbxref=GenBank:WP_002438231.1;Name=WP_002438231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503369.1;locus_tag=CP553_RS08595;product=YehR family lipoprotein;protein_id=WP_002438231.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	13044	14621	.	-	.	ID=gene-CP553_RS08600;Name=CP553_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08600;old_locus_tag=CP553_08905
NZ_PCFD01000025.1	Protein Homology	CDS	13044	14621	.	-	0	ID=cds-WP_002438233.1;Parent=gene-CP553_RS08600;Dbxref=GenBank:WP_002438233.1;Name=WP_002438233.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501219.1;locus_tag=CP553_RS08600;product=FMN-binding glutamate synthase family protein;protein_id=WP_002438233.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	14766	15548	.	+	.	ID=gene-CP553_RS08605;Name=lnsB;gbkey=Gene;gene=lnsB;gene_biotype=protein_coding;locus_tag=CP553_RS08605;old_locus_tag=CP553_08910
NZ_PCFD01000025.1	Protein Homology	CDS	14766	15548	.	+	0	ID=cds-WP_002456045.1;Parent=gene-CP553_RS08605;Dbxref=GenBank:WP_002456045.1;Name=WP_002456045.1;gbkey=CDS;gene=lnsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495092.1;locus_tag=CP553_RS08605;product=CPBP family lipoprotein N-acylation protein LnsB;protein_id=WP_002456045.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	15577	16347	.	+	.	ID=gene-CP553_RS08610;Name=CP553_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08610
NZ_PCFD01000025.1	Protein Homology	CDS	15577	16347	.	+	0	ID=cds-WP_002438237.1;Parent=gene-CP553_RS08610;Dbxref=GenBank:WP_002438237.1;Name=WP_002438237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361301.1;locus_tag=CP553_RS08610;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_002438237.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	16643	17305	.	+	.	ID=gene-CP553_RS08615;Name=CP553_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08615;old_locus_tag=CP553_08920
NZ_PCFD01000025.1	Protein Homology	CDS	16643	17305	.	+	0	ID=cds-WP_001831406.1;Parent=gene-CP553_RS08615;Dbxref=GenBank:WP_001831406.1;Name=WP_001831406.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501499.1;locus_tag=CP553_RS08615;product=ABC transporter ATP-binding protein;protein_id=WP_001831406.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	17298	18074	.	+	.	ID=gene-CP553_RS08620;Name=CP553_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08620;old_locus_tag=CP553_08925
NZ_PCFD01000025.1	Protein Homology	CDS	17298	18074	.	+	0	ID=cds-WP_002456046.1;Parent=gene-CP553_RS08620;Dbxref=GenBank:WP_002456046.1;Name=WP_002456046.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501212.1;locus_tag=CP553_RS08620;product=ABC transporter permease;protein_id=WP_002456046.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	18213	19391	.	+	.	ID=gene-CP553_RS08625;Name=CP553_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08625;old_locus_tag=CP553_08930
NZ_PCFD01000025.1	Protein Homology	CDS	18213	19391	.	+	0	ID=cds-WP_001831512.1;Parent=gene-CP553_RS08625;Dbxref=GenBank:WP_001831512.1;Name=WP_001831512.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447157.1;locus_tag=CP553_RS08625;product=MFS transporter;protein_id=WP_001831512.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	19474	20829	.	-	.	ID=gene-CP553_RS08630;Name=CP553_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08630;old_locus_tag=CP553_08935
NZ_PCFD01000025.1	Protein Homology	CDS	19474	20829	.	-	0	ID=cds-WP_002438243.1;Parent=gene-CP553_RS08630;Dbxref=GenBank:WP_002438243.1;Name=WP_002438243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495096.1;locus_tag=CP553_RS08630;product=carboxylesterase family protein;protein_id=WP_002438243.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	21146	22825	.	-	.	ID=gene-CP553_RS08635;Name=CP553_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08635;old_locus_tag=CP553_08940
NZ_PCFD01000025.1	Protein Homology	CDS	21146	22825	.	-	0	ID=cds-WP_002438244.1;Parent=gene-CP553_RS08635;Dbxref=GenBank:WP_002438244.1;Name=WP_002438244.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498487.1;locus_tag=CP553_RS08635;product=APC family permease;protein_id=WP_002438244.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	pseudogene	23020	23274	.	+	.	ID=gene-CP553_RS08640;Name=CP553_RS08640;end_range=23274,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS08640;old_locus_tag=CP553_08945;partial=true;pseudo=true;start_range=.,23020
NZ_PCFD01000025.1	Protein Homology	CDS	23020	23274	.	+	0	ID=cds-CP553_RS08640;Parent=gene-CP553_RS08640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=23274,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501208.1;locus_tag=CP553_RS08640;partial=true;product=DUF1801 domain-containing protein;pseudo=true;start_range=.,23020;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	23425	24477	.	-	.	ID=gene-CP553_RS08645;Name=CP553_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08645;old_locus_tag=CP553_08950
NZ_PCFD01000025.1	Protein Homology	CDS	23425	24477	.	-	0	ID=cds-WP_002438246.1;Parent=gene-CP553_RS08645;Dbxref=GenBank:WP_002438246.1;Name=WP_002438246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432347.1;locus_tag=CP553_RS08645;product=2%2C3-butanediol dehydrogenase;protein_id=WP_002438246.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	24967	26223	.	+	.	ID=gene-CP553_RS08650;Name=CP553_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08650;old_locus_tag=CP553_08955
NZ_PCFD01000025.1	Protein Homology	CDS	24967	26223	.	+	0	ID=cds-WP_001831407.1;Parent=gene-CP553_RS08650;Dbxref=GenBank:WP_001831407.1;Name=WP_001831407.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831407.1;locus_tag=CP553_RS08650;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WP_001831407.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	26226	26861	.	+	.	ID=gene-CP553_RS08655;Name=CP553_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08655;old_locus_tag=CP553_08960
NZ_PCFD01000025.1	Protein Homology	CDS	26226	26861	.	+	0	ID=cds-WP_001831629.1;Parent=gene-CP553_RS08655;Dbxref=GenBank:WP_001831629.1;Name=WP_001831629.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637570.1;locus_tag=CP553_RS08655;product=ABC transporter permease;protein_id=WP_001831629.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	26878	27822	.	+	.	ID=gene-CP553_RS08660;Name=CP553_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08660;old_locus_tag=CP553_08965
NZ_PCFD01000025.1	Protein Homology	CDS	26878	27822	.	+	0	ID=cds-WP_002456047.1;Parent=gene-CP553_RS08660;Dbxref=GenBank:WP_002456047.1;Name=WP_002456047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474833.1;locus_tag=CP553_RS08660;product=osmoprotectant ABC transporter substrate-binding protein;protein_id=WP_002456047.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	27822	28517	.	+	.	ID=gene-CP553_RS08665;Name=CP553_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08665;old_locus_tag=CP553_08970
NZ_PCFD01000025.1	Protein Homology	CDS	27822	28517	.	+	0	ID=cds-WP_002438248.1;Parent=gene-CP553_RS08665;Dbxref=GenBank:WP_002438248.1;Name=WP_002438248.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496294.1;locus_tag=CP553_RS08665;product=ABC transporter permease;protein_id=WP_002438248.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	28699	29400	.	-	.	ID=gene-CP553_RS08670;Name=lrgB;gbkey=Gene;gene=lrgB;gene_biotype=protein_coding;locus_tag=CP553_RS08670;old_locus_tag=CP553_08975
NZ_PCFD01000025.1	Protein Homology	CDS	28699	29400	.	-	0	ID=cds-WP_002438249.1;Parent=gene-CP553_RS08670;Dbxref=GenBank:WP_002438249.1;Name=WP_002438249.1;gbkey=CDS;gene=lrgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491128.1;locus_tag=CP553_RS08670;product=antiholin-like protein LrgB;protein_id=WP_002438249.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	29404	29853	.	-	.	ID=gene-CP553_RS08675;Name=lrgA;gbkey=Gene;gene=lrgA;gene_biotype=protein_coding;locus_tag=CP553_RS08675;old_locus_tag=CP553_08980
NZ_PCFD01000025.1	Protein Homology	CDS	29404	29853	.	-	0	ID=cds-WP_001831627.1;Parent=gene-CP553_RS08675;Dbxref=GenBank:WP_001831627.1;Name=WP_001831627.1;gbkey=CDS;gene=lrgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491083.1;locus_tag=CP553_RS08675;product=antiholin-like murein hydrolase modulator LrgA;protein_id=WP_001831627.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	29997	30755	.	-	.	ID=gene-CP553_RS08680;Name=CP553_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08680;old_locus_tag=CP553_08985
NZ_PCFD01000025.1	Protein Homology	CDS	29997	30755	.	-	0	ID=cds-WP_002438253.1;Parent=gene-CP553_RS08680;Dbxref=GenBank:WP_002438253.1;Name=WP_002438253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474851.1;locus_tag=CP553_RS08680;product=response regulator transcription factor LytR;protein_id=WP_002438253.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	30736	32511	.	-	.	ID=gene-CP553_RS08685;Name=CP553_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08685;old_locus_tag=CP553_08990
NZ_PCFD01000025.1	Protein Homology	CDS	30736	32511	.	-	0	ID=cds-WP_001831559.1;Parent=gene-CP553_RS08685;Dbxref=GenBank:WP_001831559.1;Name=WP_001831559.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368660.1;locus_tag=CP553_RS08685;product=sensor histidine kinase;protein_id=WP_001831559.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	32935	34335	.	+	.	ID=gene-CP553_RS08690;Name=CP553_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08690;old_locus_tag=CP553_08995
NZ_PCFD01000025.1	Protein Homology	CDS	32935	34335	.	+	0	ID=cds-WP_002438258.1;Parent=gene-CP553_RS08690;Dbxref=GenBank:WP_002438258.1;Name=WP_002438258.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501201.1;locus_tag=CP553_RS08690;product=MFS transporter;protein_id=WP_002438258.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	34759	35691	.	+	.	ID=gene-CP553_RS08695;Name=CP553_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08695;old_locus_tag=CP553_09000
NZ_PCFD01000025.1	Protein Homology	CDS	34759	35691	.	+	0	ID=cds-WP_001831565.1;Parent=gene-CP553_RS08695;Dbxref=GenBank:WP_001831565.1;Name=WP_001831565.1;Ontology_term=GO:0015940,GO:0008677,GO:0050661;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA,NADP binding|0050661||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831565.1;locus_tag=CP553_RS08695;product=2-dehydropantoate 2-reductase;protein_id=WP_001831565.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	35814	36650	.	-	.	ID=gene-CP553_RS08700;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=CP553_RS08700;old_locus_tag=CP553_09005
NZ_PCFD01000025.1	Protein Homology	CDS	35814	36650	.	-	0	ID=cds-WP_001832893.1;Parent=gene-CP553_RS08700;Dbxref=GenBank:WP_001832893.1;Name=WP_001832893.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485922.1;locus_tag=CP553_RS08700;product=membrane protein insertase YidC;protein_id=WP_001832893.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	36811	38328	.	-	.	ID=gene-CP553_RS08705;Name=CP553_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08705;old_locus_tag=CP553_09010
NZ_PCFD01000025.1	Protein Homology	CDS	36811	38328	.	-	0	ID=cds-WP_001831582.1;Parent=gene-CP553_RS08705;Dbxref=GenBank:WP_001831582.1;Name=WP_001831582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468202.1;locus_tag=CP553_RS08705;product=serine hydrolase FLP;protein_id=WP_001831582.1;transl_table=11
NZ_PCFD01000025.1	RefSeq	gene	38615	40444	.	+	.	ID=gene-CP553_RS08710;Name=CP553_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08710;old_locus_tag=CP553_09015
NZ_PCFD01000025.1	Protein Homology	CDS	38615	40444	.	+	0	ID=cds-WP_001831444.1;Parent=gene-CP553_RS08710;Dbxref=GenBank:WP_001831444.1;Name=WP_001831444.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501195.1;locus_tag=CP553_RS08710;product=APC family permease;protein_id=WP_001831444.1;transl_table=11
##sequence-region NZ_PCFD01000026.1 1 40031
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000026.1	RefSeq	region	1	40031	.	+	.	ID=NZ_PCFD01000026.1:1..40031;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000026.1	RefSeq	gene	161	2050	.	-	.	ID=gene-CP553_RS08715;Name=vraG;gbkey=Gene;gene=vraG;gene_biotype=protein_coding;locus_tag=CP553_RS08715;old_locus_tag=CP553_09020
NZ_PCFD01000026.1	Protein Homology	CDS	161	2050	.	-	0	ID=cds-WP_001832022.1;Parent=gene-CP553_RS08715;Dbxref=GenBank:WP_001832022.1;Name=WP_001832022.1;gbkey=CDS;gene=vraG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457535.1;locus_tag=CP553_RS08715;product=ABC transporter permease VraG;protein_id=WP_001832022.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	2040	2801	.	-	.	ID=gene-CP553_RS08720;Name=vraF;gbkey=Gene;gene=vraF;gene_biotype=protein_coding;locus_tag=CP553_RS08720;old_locus_tag=CP553_09025
NZ_PCFD01000026.1	Protein Homology	CDS	2040	2801	.	-	0	ID=cds-WP_001833013.1;Parent=gene-CP553_RS08720;Dbxref=GenBank:WP_001833013.1;Name=WP_001833013.1;gbkey=CDS;gene=vraF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499226.1;locus_tag=CP553_RS08720;product=ABC transporter ATP-binding protein VraF;protein_id=WP_001833013.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	2947	3987	.	-	.	ID=gene-CP553_RS08725;Name=graS;gbkey=Gene;gene=graS;gene_biotype=protein_coding;gene_synonym=apsS;locus_tag=CP553_RS08725;old_locus_tag=CP553_09030
NZ_PCFD01000026.1	Protein Homology	CDS	2947	3987	.	-	0	ID=cds-WP_002438833.1;Parent=gene-CP553_RS08725;Dbxref=GenBank:WP_002438833.1;Name=WP_002438833.1;gbkey=CDS;gene=graS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468453.1;locus_tag=CP553_RS08725;product=histidine kinase GraS/ApsS;protein_id=WP_002438833.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	3980	4654	.	-	.	ID=gene-CP553_RS08730;Name=graR;gbkey=Gene;gene=graR;gene_biotype=protein_coding;gene_synonym=apsR;locus_tag=CP553_RS08730;old_locus_tag=CP553_09035
NZ_PCFD01000026.1	Protein Homology	CDS	3980	4654	.	-	0	ID=cds-WP_001832046.1;Parent=gene-CP553_RS08730;Dbxref=GenBank:WP_001832046.1;Name=WP_001832046.1;gbkey=CDS;gene=graR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499224.1;locus_tag=CP553_RS08730;product=response regulator transcription factor GraR/ApsR;protein_id=WP_001832046.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	4673	5596	.	-	.	ID=gene-CP553_RS08735;Name=graX;gbkey=Gene;gene=graX;gene_biotype=protein_coding;gene_synonym=apsX;locus_tag=CP553_RS08735;old_locus_tag=CP553_09040
NZ_PCFD01000026.1	Protein Homology	CDS	4673	5596	.	-	0	ID=cds-WP_001832033.1;Parent=gene-CP553_RS08735;Dbxref=GenBank:WP_001832033.1;Name=WP_001832033.1;gbkey=CDS;gene=graX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832033.1;locus_tag=CP553_RS08735;product=auxiliary protein GraX/ApsX;protein_id=WP_001832033.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	5705	6211	.	+	.	ID=gene-CP553_RS08740;Name=CP553_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08740;old_locus_tag=CP553_09045
NZ_PCFD01000026.1	Protein Homology	CDS	5705	6211	.	+	0	ID=cds-WP_002438832.1;Parent=gene-CP553_RS08740;Dbxref=GenBank:WP_002438832.1;Name=WP_002438832.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438832.1;locus_tag=CP553_RS08740;product=GNAT family N-acetyltransferase;protein_id=WP_002438832.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	6772	7821	.	-	.	ID=gene-CP553_RS08745;Name=CP553_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08745;old_locus_tag=CP553_09050
NZ_PCFD01000026.1	Protein Homology	CDS	6772	7821	.	-	0	ID=cds-WP_002438830.1;Parent=gene-CP553_RS08745;Dbxref=GenBank:WP_002438830.1;Name=WP_002438830.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438830.1;locus_tag=CP553_RS08745;product=alpha/beta hydrolase;protein_id=WP_002438830.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	8100	9167	.	-	.	ID=gene-CP553_RS08750;Name=CP553_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08750;old_locus_tag=CP553_09055
NZ_PCFD01000026.1	Protein Homology	CDS	8100	9167	.	-	0	ID=cds-WP_001832177.1;Parent=gene-CP553_RS08750;Dbxref=GenBank:WP_001832177.1;Name=WP_001832177.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499218.1;locus_tag=CP553_RS08750;product=YkvI family membrane protein;protein_id=WP_001832177.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	9392	9892	.	-	.	ID=gene-CP553_RS08755;Name=CP553_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08755;old_locus_tag=CP553_09060
NZ_PCFD01000026.1	Protein Homology	CDS	9392	9892	.	-	0	ID=cds-WP_001832127.1;Parent=gene-CP553_RS08755;Dbxref=GenBank:WP_001832127.1;Name=WP_001832127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499217.1;locus_tag=CP553_RS08755;product=hypothetical protein;protein_id=WP_001832127.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	10212	11009	.	-	.	ID=gene-CP553_RS08760;Name=CP553_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08760;old_locus_tag=CP553_09065
NZ_PCFD01000026.1	Protein Homology	CDS	10212	11009	.	-	0	ID=cds-WP_001832050.1;Parent=gene-CP553_RS08760;Dbxref=GenBank:WP_001832050.1;Name=WP_001832050.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499211.1;locus_tag=CP553_RS08760;product=ABC transporter ATP-binding protein;protein_id=WP_001832050.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	11368	12201	.	-	.	ID=gene-CP553_RS08765;Name=CP553_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08765;old_locus_tag=CP553_09070
NZ_PCFD01000026.1	Protein Homology	CDS	11368	12201	.	-	0	ID=cds-WP_001832123.1;Parent=gene-CP553_RS08765;Dbxref=GenBank:WP_001832123.1;Name=WP_001832123.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499210.1;locus_tag=CP553_RS08765;product=YitT family protein;protein_id=WP_001832123.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	12738	13967	.	-	.	ID=gene-CP553_RS08770;Name=CP553_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08770;old_locus_tag=CP553_09075
NZ_PCFD01000026.1	Protein Homology	CDS	12738	13967	.	-	0	ID=cds-WP_002493541.1;Parent=gene-CP553_RS08770;Dbxref=GenBank:WP_002493541.1;Name=WP_002493541.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441322.1;locus_tag=CP553_RS08770;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_002493541.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	14253	15980	.	-	.	ID=gene-CP553_RS08775;Name=CP553_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08775;old_locus_tag=CP553_09080
NZ_PCFD01000026.1	Protein Homology	CDS	14253	15980	.	-	0	ID=cds-WP_001832157.1;Parent=gene-CP553_RS08775;Dbxref=GenBank:WP_001832157.1;Name=WP_001832157.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499207.1;locus_tag=CP553_RS08775;product=ABC transporter ATP-binding protein;protein_id=WP_001832157.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	16964	17362	.	-	.	ID=gene-CP553_RS08780;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=CP553_RS08780;old_locus_tag=CP553_09095
NZ_PCFD01000026.1	Protein Homology	CDS	16964	17362	.	-	0	ID=cds-WP_001833002.1;Parent=gene-CP553_RS08780;Dbxref=GenBank:WP_001833002.1;Name=WP_001833002.1;Ontology_term=GO:0019350,GO:0046872,GO:0047348,GO:0005737;gbkey=CDS;gene=tagD;go_component=cytoplasm|0005737||IEA;go_function=metal ion binding|0046872||IEA,glycerol-3-phosphate cytidylyltransferase activity|0047348||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499205.1;locus_tag=CP553_RS08780;product=glycerol-3-phosphate cytidylyltransferase;protein_id=WP_001833002.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	17497	18561	.	-	.	ID=gene-CP553_RS08785;Name=CP553_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08785;old_locus_tag=CP553_09100
NZ_PCFD01000026.1	Protein Homology	CDS	17497	18561	.	-	0	ID=cds-WP_002438818.1;Parent=gene-CP553_RS08785;Dbxref=GenBank:WP_002438818.1;Name=WP_002438818.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491427.1;locus_tag=CP553_RS08785;product=glycosyltransferase family 2 protein;protein_id=WP_002438818.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	18561	19652	.	-	.	ID=gene-CP553_RS08790;Name=tarB;gbkey=Gene;gene=tarB;gene_biotype=protein_coding;locus_tag=CP553_RS08790;old_locus_tag=CP553_09105
NZ_PCFD01000026.1	Protein Homology	CDS	18561	19652	.	-	0	ID=cds-WP_002438817.1;Parent=gene-CP553_RS08790;Dbxref=GenBank:WP_002438817.1;Name=WP_002438817.1;Ontology_term=GO:0019350,GO:0047355;gbkey=CDS;gene=tarB;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832991.1;locus_tag=CP553_RS08790;product=teichoic acid glycerol-phosphate primase TarB;protein_id=WP_002438817.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	19975	20787	.	-	.	ID=gene-CP553_RS08795;Name=CP553_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08795;old_locus_tag=CP553_09110
NZ_PCFD01000026.1	Protein Homology	CDS	19975	20787	.	-	0	ID=cds-WP_001832041.1;Parent=gene-CP553_RS08795;Dbxref=GenBank:WP_001832041.1;Name=WP_001832041.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499202.1;locus_tag=CP553_RS08795;product=ABC transporter permease;protein_id=WP_001832041.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	21119	21913	.	+	.	ID=gene-CP553_RS08800;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=CP553_RS08800;old_locus_tag=CP553_09115
NZ_PCFD01000026.1	Protein Homology	CDS	21119	21913	.	+	0	ID=cds-WP_001832071.1;Parent=gene-CP553_RS08800;Dbxref=GenBank:WP_001832071.1;Name=WP_001832071.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=tagH;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499201.1;locus_tag=CP553_RS08800;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=WP_001832071.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	21991	22749	.	-	.	ID=gene-CP553_RS08805;Name=tarA;gbkey=Gene;gene=tarA;gene_biotype=protein_coding;locus_tag=CP553_RS08805;old_locus_tag=CP553_09120
NZ_PCFD01000026.1	Protein Homology	CDS	21991	22749	.	-	0	ID=cds-WP_002495310.1;Parent=gene-CP553_RS08805;Dbxref=GenBank:WP_002495310.1;Name=WP_002495310.1;Ontology_term=GO:0019350,GO:0047244;gbkey=CDS;gene=tarA;go_function=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity|0047244||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476364.1;locus_tag=CP553_RS08805;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;protein_id=WP_002495310.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	22924	23670	.	+	.	ID=gene-CP553_RS08810;Name=CP553_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08810;old_locus_tag=CP553_09125
NZ_PCFD01000026.1	Protein Homology	CDS	22924	23670	.	+	0	ID=cds-WP_002438814.1;Parent=gene-CP553_RS08810;Dbxref=GenBank:WP_002438814.1;Name=WP_002438814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369082.1;locus_tag=CP553_RS08810;product=M50 family metallopeptidase;protein_id=WP_002438814.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	23835	24479	.	-	.	ID=gene-CP553_RS08815;Name=CP553_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08815;old_locus_tag=CP553_09130
NZ_PCFD01000026.1	Protein Homology	CDS	23835	24479	.	-	0	ID=cds-WP_001832139.1;Parent=gene-CP553_RS08815;Dbxref=GenBank:WP_001832139.1;Name=WP_001832139.1;Ontology_term=GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499198.1;locus_tag=CP553_RS08815;product=metal-dependent transcriptional regulator;protein_id=WP_001832139.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	24599	25345	.	+	.	ID=gene-CP553_RS08820;Name=CP553_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08820;old_locus_tag=CP553_09135
NZ_PCFD01000026.1	Protein Homology	CDS	24599	25345	.	+	0	ID=cds-WP_001832084.1;Parent=gene-CP553_RS08820;Dbxref=GenBank:WP_001832084.1;Name=WP_001832084.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457550.1;locus_tag=CP553_RS08820;product=metal ABC transporter ATP-binding protein;protein_id=WP_001832084.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	25346	26182	.	+	.	ID=gene-CP553_RS08825;Name=CP553_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08825;old_locus_tag=CP553_09140
NZ_PCFD01000026.1	Protein Homology	CDS	25346	26182	.	+	0	ID=cds-WP_001832042.1;Parent=gene-CP553_RS08825;Dbxref=GenBank:WP_001832042.1;Name=WP_001832042.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499196.1;locus_tag=CP553_RS08825;product=metal ABC transporter permease;protein_id=WP_001832042.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	26179	27108	.	+	.	ID=gene-CP553_RS08830;Name=mntC;gbkey=Gene;gene=mntC;gene_biotype=protein_coding;locus_tag=CP553_RS08830;old_locus_tag=CP553_09145
NZ_PCFD01000026.1	Protein Homology	CDS	26179	27108	.	+	0	ID=cds-WP_001832103.1;Parent=gene-CP553_RS08830;Dbxref=GenBank:WP_001832103.1;Name=WP_001832103.1;Ontology_term=GO:0015410;gbkey=CDS;gene=mntC;go_function=ABC-type manganese transporter activity|0015410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499195.1;locus_tag=CP553_RS08830;product=manganese ABC transporter substrate-binding lipoprotein MntC;protein_id=WP_001832103.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	27843	29882	.	-	.	ID=gene-CP553_RS08835;Name=CP553_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08835;old_locus_tag=CP553_09150
NZ_PCFD01000026.1	Protein Homology	CDS	27843	29882	.	-	0	ID=cds-WP_001832160.1;Parent=gene-CP553_RS08835;Dbxref=GenBank:WP_001832160.1;Name=WP_001832160.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452630.1;locus_tag=CP553_RS08835;product=cation:proton antiporter;protein_id=WP_001832160.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	30331	30795	.	-	.	ID=gene-CP553_RS08840;Name=mnhG2;gbkey=Gene;gene=mnhG2;gene_biotype=protein_coding;locus_tag=CP553_RS08840;old_locus_tag=CP553_09155
NZ_PCFD01000026.1	Protein Homology	CDS	30331	30795	.	-	0	ID=cds-WP_001832099.1;Parent=gene-CP553_RS08840;Dbxref=GenBank:WP_001832099.1;Name=WP_001832099.1;gbkey=CDS;gene=mnhG2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832099.1;locus_tag=CP553_RS08840;product=Na+/H+ antiporter Mnh2 subunit G;protein_id=WP_001832099.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	30770	31072	.	-	.	ID=gene-CP553_RS08845;Name=mnhF2;gbkey=Gene;gene=mnhF2;gene_biotype=protein_coding;locus_tag=CP553_RS08845;old_locus_tag=CP553_09160
NZ_PCFD01000026.1	Protein Homology	CDS	30770	31072	.	-	0	ID=cds-WP_001832031.1;Parent=gene-CP553_RS08845;Dbxref=GenBank:WP_001832031.1;Name=WP_001832031.1;gbkey=CDS;gene=mnhF2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498027.1;locus_tag=CP553_RS08845;product=Na+/H+ antiporter Mnh2 subunit F;protein_id=WP_001832031.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	31069	31551	.	-	.	ID=gene-CP553_RS08850;Name=mnhE2;gbkey=Gene;gene=mnhE2;gene_biotype=protein_coding;locus_tag=CP553_RS08850;old_locus_tag=CP553_09165
NZ_PCFD01000026.1	Protein Homology	CDS	31069	31551	.	-	0	ID=cds-WP_001832121.1;Parent=gene-CP553_RS08850;Dbxref=GenBank:WP_001832121.1;Name=WP_001832121.1;gbkey=CDS;gene=mnhE2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499191.1;locus_tag=CP553_RS08850;product=Na+/H+ antiporter Mnh2 subunit E;protein_id=WP_001832121.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	31548	33050	.	-	.	ID=gene-CP553_RS08855;Name=mnhD2;gbkey=Gene;gene=mnhD2;gene_biotype=protein_coding;locus_tag=CP553_RS08855;old_locus_tag=CP553_09170
NZ_PCFD01000026.1	Protein Homology	CDS	31548	33050	.	-	0	ID=cds-WP_011082609.1;Parent=gene-CP553_RS08855;Dbxref=GenBank:WP_011082609.1;Name=WP_011082609.1;gbkey=CDS;gene=mnhD2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082609.1;locus_tag=CP553_RS08855;product=Na+/H+ antiporter Mnh2 subunit D;protein_id=WP_011082609.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	33040	33384	.	-	.	ID=gene-CP553_RS08860;Name=mnhC2;gbkey=Gene;gene=mnhC2;gene_biotype=protein_coding;locus_tag=CP553_RS08860;old_locus_tag=CP553_09175
NZ_PCFD01000026.1	Protein Homology	CDS	33040	33384	.	-	0	ID=cds-WP_001832057.1;Parent=gene-CP553_RS08860;Dbxref=GenBank:WP_001832057.1;Name=WP_001832057.1;gbkey=CDS;gene=mnhC2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441278.1;locus_tag=CP553_RS08860;product=Na+/H+ antiporter Mnh2 subunit C;protein_id=WP_001832057.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	33381	33806	.	-	.	ID=gene-CP553_RS08865;Name=mnhB2;gbkey=Gene;gene=mnhB2;gene_biotype=protein_coding;locus_tag=CP553_RS08865;old_locus_tag=CP553_09180
NZ_PCFD01000026.1	Protein Homology	CDS	33381	33806	.	-	0	ID=cds-WP_001832105.1;Parent=gene-CP553_RS08865;Dbxref=GenBank:WP_001832105.1;Name=WP_001832105.1;gbkey=CDS;gene=mnhB2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499188.1;locus_tag=CP553_RS08865;product=Na+/H+ antiporter Mnh2 subunit B;protein_id=WP_001832105.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	33793	36195	.	-	.	ID=gene-CP553_RS08870;Name=CP553_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08870;old_locus_tag=CP553_09185
NZ_PCFD01000026.1	Protein Homology	CDS	33793	36195	.	-	0	ID=cds-WP_002438805.1;Parent=gene-CP553_RS08870;Dbxref=GenBank:WP_002438805.1;Name=WP_002438805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485112.1;locus_tag=CP553_RS08870;product=DUF4040 family protein;protein_id=WP_002438805.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	36919	37125	.	+	.	ID=gene-CP553_RS08875;Name=sroA;gbkey=Gene;gene=sroA;gene_biotype=protein_coding;locus_tag=CP553_RS08875;old_locus_tag=CP553_09190
NZ_PCFD01000026.1	Protein Homology	CDS	36919	37125	.	+	0	ID=cds-WP_001832147.1;Parent=gene-CP553_RS08875;Dbxref=GenBank:WP_001832147.1;Name=WP_001832147.1;gbkey=CDS;gene=sroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832147.1;locus_tag=CP553_RS08875;product=sigS mRNA-stabilizing protein SroA;protein_id=WP_001832147.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	37141	37365	.	+	.	ID=gene-CP553_RS08880;Name=CP553_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08880;old_locus_tag=CP553_09195
NZ_PCFD01000026.1	Protein Homology	CDS	37141	37365	.	+	0	ID=cds-WP_002438795.1;Parent=gene-CP553_RS08880;Dbxref=GenBank:WP_002438795.1;Name=WP_002438795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496393.1;locus_tag=CP553_RS08880;product=DUF2922 domain-containing protein;protein_id=WP_002438795.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	37719	38648	.	+	.	ID=gene-CP553_RS08885;Name=CP553_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08885;old_locus_tag=CP553_09210
NZ_PCFD01000026.1	Protein Homology	CDS	37719	38648	.	+	0	ID=cds-WP_001832125.1;Parent=gene-CP553_RS08885;Dbxref=GenBank:WP_001832125.1;Name=WP_001832125.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474409.1;locus_tag=CP553_RS08885;product=DMT family transporter;protein_id=WP_001832125.1;transl_table=11
NZ_PCFD01000026.1	RefSeq	gene	38974	39927	.	+	.	ID=gene-CP553_RS08890;Name=CP553_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08890;old_locus_tag=CP553_09215
NZ_PCFD01000026.1	Protein Homology	CDS	38974	39927	.	+	0	ID=cds-WP_002438787.1;Parent=gene-CP553_RS08890;Dbxref=GenBank:WP_002438787.1;Name=WP_002438787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832066.1;locus_tag=CP553_RS08890;product=hypothetical protein;protein_id=WP_002438787.1;transl_table=11
##sequence-region NZ_PCFD01000027.1 1 39965
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000027.1	RefSeq	region	1	39965	.	+	.	ID=NZ_PCFD01000027.1:1..39965;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000027.1	RefSeq	gene	1	125	.	-	.	ID=gene-CP553_RS08895;Name=CP553_RS08895;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS08895;old_locus_tag=CP553_09220;partial=true;start_range=.,1
NZ_PCFD01000027.1	cmsearch	rRNA	1	125	.	-	.	ID=rna-CP553_RS08895;Parent=gene-CP553_RS08895;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS08895;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000027.1	cmsearch	exon	1	125	.	-	.	ID=exon-CP553_RS08895-1;Parent=rna-CP553_RS08895;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS08895;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000027.1	RefSeq	gene	243	318	.	-	.	ID=gene-CP553_RS08900;Name=CP553_RS08900;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS08900;old_locus_tag=CP553_09225
NZ_PCFD01000027.1	tRNAscan-SE	tRNA	243	318	.	-	.	ID=rna-CP553_RS08900;Parent=gene-CP553_RS08900;anticodon=(pos:complement(283..285));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08900;product=tRNA-Ala
NZ_PCFD01000027.1	tRNAscan-SE	exon	243	318	.	-	.	ID=exon-CP553_RS08900-1;Parent=rna-CP553_RS08900;anticodon=(pos:complement(283..285));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08900;product=tRNA-Ala
NZ_PCFD01000027.1	RefSeq	gene	333	406	.	-	.	ID=gene-CP553_RS08905;Name=CP553_RS08905;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS08905;old_locus_tag=CP553_09230
NZ_PCFD01000027.1	tRNAscan-SE	tRNA	333	406	.	-	.	ID=rna-CP553_RS08905;Parent=gene-CP553_RS08905;anticodon=(pos:complement(370..372));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08905;product=tRNA-Pro
NZ_PCFD01000027.1	tRNAscan-SE	exon	333	406	.	-	.	ID=exon-CP553_RS08905-1;Parent=rna-CP553_RS08905;anticodon=(pos:complement(370..372));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08905;product=tRNA-Pro
NZ_PCFD01000027.1	RefSeq	gene	433	509	.	-	.	ID=gene-CP553_RS08910;Name=CP553_RS08910;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS08910;old_locus_tag=CP553_09235
NZ_PCFD01000027.1	tRNAscan-SE	tRNA	433	509	.	-	.	ID=rna-CP553_RS08910;Parent=gene-CP553_RS08910;anticodon=(pos:complement(473..475));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08910;product=tRNA-Arg
NZ_PCFD01000027.1	tRNAscan-SE	exon	433	509	.	-	.	ID=exon-CP553_RS08910-1;Parent=rna-CP553_RS08910;anticodon=(pos:complement(473..475));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08910;product=tRNA-Arg
NZ_PCFD01000027.1	RefSeq	gene	522	610	.	-	.	ID=gene-CP553_RS08915;Name=CP553_RS08915;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS08915;old_locus_tag=CP553_09240
NZ_PCFD01000027.1	tRNAscan-SE	tRNA	522	610	.	-	.	ID=rna-CP553_RS08915;Parent=gene-CP553_RS08915;anticodon=(pos:complement(574..576));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08915;product=tRNA-Leu
NZ_PCFD01000027.1	tRNAscan-SE	exon	522	610	.	-	.	ID=exon-CP553_RS08915-1;Parent=rna-CP553_RS08915;anticodon=(pos:complement(574..576));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08915;product=tRNA-Leu
NZ_PCFD01000027.1	RefSeq	gene	622	696	.	-	.	ID=gene-CP553_RS08920;Name=CP553_RS08920;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS08920;old_locus_tag=CP553_09245
NZ_PCFD01000027.1	tRNAscan-SE	tRNA	622	696	.	-	.	ID=rna-CP553_RS08920;Parent=gene-CP553_RS08920;anticodon=(pos:complement(662..664));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08920;product=tRNA-Gly
NZ_PCFD01000027.1	tRNAscan-SE	exon	622	696	.	-	.	ID=exon-CP553_RS08920-1;Parent=rna-CP553_RS08920;anticodon=(pos:complement(662..664));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08920;product=tRNA-Gly
NZ_PCFD01000027.1	RefSeq	gene	715	787	.	-	.	ID=gene-CP553_RS08925;Name=CP553_RS08925;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS08925;old_locus_tag=CP553_09250
NZ_PCFD01000027.1	tRNAscan-SE	tRNA	715	787	.	-	.	ID=rna-CP553_RS08925;Parent=gene-CP553_RS08925;anticodon=(pos:complement(752..754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08925;product=tRNA-Lys
NZ_PCFD01000027.1	tRNAscan-SE	exon	715	787	.	-	.	ID=exon-CP553_RS08925-1;Parent=rna-CP553_RS08925;anticodon=(pos:complement(752..754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08925;product=tRNA-Lys
NZ_PCFD01000027.1	RefSeq	gene	794	869	.	-	.	ID=gene-CP553_RS08930;Name=CP553_RS08930;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS08930;old_locus_tag=CP553_09255
NZ_PCFD01000027.1	tRNAscan-SE	tRNA	794	869	.	-	.	ID=rna-CP553_RS08930;Parent=gene-CP553_RS08930;anticodon=(pos:complement(834..836));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08930;product=tRNA-Thr
NZ_PCFD01000027.1	tRNAscan-SE	exon	794	869	.	-	.	ID=exon-CP553_RS08930-1;Parent=rna-CP553_RS08930;anticodon=(pos:complement(834..836));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08930;product=tRNA-Thr
NZ_PCFD01000027.1	RefSeq	gene	876	951	.	-	.	ID=gene-CP553_RS08935;Name=CP553_RS08935;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS08935;old_locus_tag=CP553_09260
NZ_PCFD01000027.1	tRNAscan-SE	tRNA	876	951	.	-	.	ID=rna-CP553_RS08935;Parent=gene-CP553_RS08935;anticodon=(pos:complement(916..918));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08935;product=tRNA-Val
NZ_PCFD01000027.1	tRNAscan-SE	exon	876	951	.	-	.	ID=exon-CP553_RS08935-1;Parent=rna-CP553_RS08935;anticodon=(pos:complement(916..918));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS08935;product=tRNA-Val
NZ_PCFD01000027.1	RefSeq	gene	962	1076	.	-	.	ID=gene-CP553_RS08940;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CP553_RS08940;old_locus_tag=CP553_09265
NZ_PCFD01000027.1	cmsearch	rRNA	962	1076	.	-	.	ID=rna-CP553_RS08940;Parent=gene-CP553_RS08940;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS08940;product=5S ribosomal RNA
NZ_PCFD01000027.1	cmsearch	exon	962	1076	.	-	.	ID=exon-CP553_RS08940-1;Parent=rna-CP553_RS08940;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS08940;product=5S ribosomal RNA
NZ_PCFD01000027.1	RefSeq	gene	1561	3048	.	-	.	ID=gene-CP553_RS08945;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=CP553_RS08945;old_locus_tag=CP553_09270
NZ_PCFD01000027.1	Protein Homology	CDS	1561	3048	.	-	0	ID=cds-WP_001833056.1;Parent=gene-CP553_RS08945;Dbxref=GenBank:WP_001833056.1;Name=WP_001833056.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436798.1;locus_tag=CP553_RS08945;product=lysine--tRNA ligase;protein_id=WP_001833056.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	3384	3863	.	-	.	ID=gene-CP553_RS08950;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=CP553_RS08950;old_locus_tag=CP553_09275
NZ_PCFD01000027.1	Protein Homology	CDS	3384	3863	.	-	0	ID=cds-WP_001832213.1;Parent=gene-CP553_RS08950;Dbxref=GenBank:WP_001832213.1;Name=WP_001832213.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503786.1;locus_tag=CP553_RS08950;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_001832213.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	3864	4229	.	-	.	ID=gene-CP553_RS08955;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=CP553_RS08955;old_locus_tag=CP553_09280
NZ_PCFD01000027.1	Protein Homology	CDS	3864	4229	.	-	0	ID=cds-WP_001832204.1;Parent=gene-CP553_RS08955;Dbxref=GenBank:WP_001832204.1;Name=WP_001832204.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473218.1;locus_tag=CP553_RS08955;product=dihydroneopterin aldolase;protein_id=WP_001832204.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	4207	5025	.	-	.	ID=gene-CP553_RS08960;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=CP553_RS08960;old_locus_tag=CP553_09285
NZ_PCFD01000027.1	Protein Homology	CDS	4207	5025	.	-	0	ID=cds-WP_002440771.1;Parent=gene-CP553_RS08960;Dbxref=GenBank:WP_002440771.1;Name=WP_002440771.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499066.1;locus_tag=CP553_RS08960;product=dihydropteroate synthase;protein_id=WP_002440771.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	5321	6253	.	-	.	ID=gene-CP553_RS08965;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=CP553_RS08965;old_locus_tag=CP553_09290
NZ_PCFD01000027.1	Protein Homology	CDS	5321	6253	.	-	0	ID=cds-WP_001832242.1;Parent=gene-CP553_RS08965;Dbxref=GenBank:WP_001832242.1;Name=WP_001832242.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499065.1;locus_tag=CP553_RS08965;product=cysteine synthase A;protein_id=WP_001832242.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	6590	7471	.	-	.	ID=gene-CP553_RS08970;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=CP553_RS08970;old_locus_tag=CP553_09295
NZ_PCFD01000027.1	Protein Homology	CDS	6590	7471	.	-	0	ID=cds-WP_001832190.1;Parent=gene-CP553_RS08970;Dbxref=GenBank:WP_001832190.1;Name=WP_001832190.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458684.1;locus_tag=CP553_RS08970;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001832190.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	7726	9828	.	-	.	ID=gene-CP553_RS08975;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=CP553_RS08975;old_locus_tag=CP553_09300
NZ_PCFD01000027.1	Protein Homology	CDS	7726	9828	.	-	0	ID=cds-WP_001832199.1;Parent=gene-CP553_RS08975;Dbxref=GenBank:WP_001832199.1;Name=WP_001832199.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503787.1;locus_tag=CP553_RS08975;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001832199.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	10103	10642	.	-	.	ID=gene-CP553_RS08980;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=CP553_RS08980;old_locus_tag=CP553_09305
NZ_PCFD01000027.1	Protein Homology	CDS	10103	10642	.	-	0	ID=cds-WP_001832216.1;Parent=gene-CP553_RS08980;Dbxref=GenBank:WP_001832216.1;Name=WP_001832216.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485864.1;locus_tag=CP553_RS08980;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_001832216.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	10642	11940	.	-	.	ID=gene-CP553_RS08985;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=CP553_RS08985;old_locus_tag=CP553_09310
NZ_PCFD01000027.1	Protein Homology	CDS	10642	11940	.	-	0	ID=cds-WP_002440766.1;Parent=gene-CP553_RS08985;Dbxref=GenBank:WP_002440766.1;Name=WP_002440766.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469333.1;locus_tag=CP553_RS08985;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_002440766.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	12218	12619	.	-	.	ID=gene-CP553_RS08990;Name=CP553_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS08990;old_locus_tag=CP553_09315
NZ_PCFD01000027.1	Protein Homology	CDS	12218	12619	.	-	0	ID=cds-WP_002440762.1;Parent=gene-CP553_RS08990;Dbxref=GenBank:WP_002440762.1;Name=WP_002440762.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499060.1;locus_tag=CP553_RS08990;product=S1 domain-containing RNA-binding protein;protein_id=WP_002440762.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	12713	13114	.	-	.	ID=gene-CP553_RS08995;Name=divIC;gbkey=Gene;gene=divIC;gene_biotype=protein_coding;locus_tag=CP553_RS08995;old_locus_tag=CP553_09320
NZ_PCFD01000027.1	Protein Homology	CDS	12713	13114	.	-	0	ID=cds-WP_001832241.1;Parent=gene-CP553_RS08995;Dbxref=GenBank:WP_001832241.1;Name=WP_001832241.1;gbkey=CDS;gene=divIC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368838.1;locus_tag=CP553_RS08995;product=cell division protein DivIC;protein_id=WP_001832241.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	13138	13401	.	-	.	ID=gene-CP553_RS09000;Name=CP553_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09000;old_locus_tag=CP553_09325
NZ_PCFD01000027.1	Protein Homology	CDS	13138	13401	.	-	0	ID=cds-WP_001832191.1;Parent=gene-CP553_RS09000;Dbxref=GenBank:WP_001832191.1;Name=WP_001832191.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832191.1;locus_tag=CP553_RS09000;product=RNA-binding S4 domain-containing protein;protein_id=WP_001832191.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	13398	14588	.	-	.	ID=gene-CP553_RS09005;Name=CP553_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09005;old_locus_tag=CP553_09330
NZ_PCFD01000027.1	Protein Homology	CDS	13398	14588	.	-	0	ID=cds-WP_001832236.1;Parent=gene-CP553_RS09005;Dbxref=GenBank:WP_001832236.1;Name=WP_001832236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458679.1;locus_tag=CP553_RS09005;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_001832236.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	14585	16126	.	-	.	ID=gene-CP553_RS09010;Name=CP553_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09010;old_locus_tag=CP553_09335
NZ_PCFD01000027.1	Protein Homology	CDS	14585	16126	.	-	0	ID=cds-WP_001832207.1;Parent=gene-CP553_RS09010;Dbxref=GenBank:WP_001832207.1;Name=WP_001832207.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497193.1;locus_tag=CP553_RS09010;product=polysaccharide biosynthesis protein;protein_id=WP_001832207.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	16116	19616	.	-	.	ID=gene-CP553_RS09015;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=CP553_RS09015;old_locus_tag=CP553_09340
NZ_PCFD01000027.1	Protein Homology	CDS	16116	19616	.	-	0	ID=cds-WP_001832239.1;Parent=gene-CP553_RS09015;Dbxref=GenBank:WP_001832239.1;Name=WP_001832239.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490925.1;locus_tag=CP553_RS09015;product=transcription-repair coupling factor;protein_id=WP_001832239.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	19622	20194	.	-	.	ID=gene-CP553_RS09020;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=CP553_RS09020;old_locus_tag=CP553_09345
NZ_PCFD01000027.1	Protein Homology	CDS	19622	20194	.	-	0	ID=cds-WP_001832229.1;Parent=gene-CP553_RS09020;Dbxref=GenBank:WP_001832229.1;Name=WP_001832229.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499054.1;locus_tag=CP553_RS09020;product=aminoacyl-tRNA hydrolase;protein_id=WP_001832229.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	20447	21106	.	-	.	ID=gene-CP553_RS09025;Name=CP553_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09025;old_locus_tag=CP553_09350
NZ_PCFD01000027.1	Protein Homology	CDS	20447	21106	.	-	0	ID=cds-WP_001832185.1;Parent=gene-CP553_RS09025;Dbxref=GenBank:WP_001832185.1;Name=WP_001832185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485035.1;locus_tag=CP553_RS09025;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_001832185.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	21276	22241	.	-	.	ID=gene-CP553_RS09030;Name=CP553_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09030;old_locus_tag=CP553_09355
NZ_PCFD01000027.1	Protein Homology	CDS	21276	22241	.	-	0	ID=cds-WP_001832233.1;Parent=gene-CP553_RS09030;Dbxref=GenBank:WP_001832233.1;Name=WP_001832233.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1;locus_tag=CP553_RS09030;product=ribose-phosphate diphosphokinase;protein_id=WP_001832233.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	22385	23740	.	-	.	ID=gene-CP553_RS09035;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=CP553_RS09035;old_locus_tag=CP553_09360
NZ_PCFD01000027.1	Protein Homology	CDS	22385	23740	.	-	0	ID=cds-WP_001832214.1;Parent=gene-CP553_RS09035;Dbxref=GenBank:WP_001832214.1;Name=WP_001832214.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832214.1;locus_tag=CP553_RS09035;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_001832214.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	24350	24658	.	-	.	ID=gene-CP553_RS09040;Name=spoVG;gbkey=Gene;gene=spoVG;gene_biotype=protein_coding;locus_tag=CP553_RS09040;old_locus_tag=CP553_09365
NZ_PCFD01000027.1	Protein Homology	CDS	24350	24658	.	-	0	ID=cds-WP_001832195.1;Parent=gene-CP553_RS09040;Dbxref=GenBank:WP_001832195.1;Name=WP_001832195.1;Ontology_term=GO:0030435;gbkey=CDS;gene=spoVG;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499048.1;locus_tag=CP553_RS09040;product=septation regulator SpoVG;protein_id=WP_001832195.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	24718	25098	.	-	.	ID=gene-CP553_RS09045;Name=CP553_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09045;old_locus_tag=CP553_09370
NZ_PCFD01000027.1	Protein Homology	CDS	24718	25098	.	-	0	ID=cds-WP_001832217.1;Parent=gene-CP553_RS09045;Dbxref=GenBank:WP_001832217.1;Name=WP_001832217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499047.1;locus_tag=CP553_RS09045;product=RidA family protein;protein_id=WP_001832217.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	25120	25944	.	-	.	ID=gene-CP553_RS09050;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=CP553_RS09050;old_locus_tag=CP553_09375
NZ_PCFD01000027.1	Protein Homology	CDS	25120	25944	.	-	0	ID=cds-WP_001832187.1;Parent=gene-CP553_RS09050;Dbxref=GenBank:WP_001832187.1;Name=WP_001832187.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499046.1;locus_tag=CP553_RS09050;product=pur operon repressor;protein_id=WP_001832187.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	25959	26807	.	-	.	ID=gene-CP553_RS09055;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=CP553_RS09055;old_locus_tag=CP553_09380
NZ_PCFD01000027.1	Protein Homology	CDS	25959	26807	.	-	0	ID=cds-WP_001832203.1;Parent=gene-CP553_RS09055;Dbxref=GenBank:WP_001832203.1;Name=WP_001832203.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499045.1;locus_tag=CP553_RS09055;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_001832203.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	27200	27463	.	-	.	ID=gene-CP553_RS09060;Name=veg;gbkey=Gene;gene=veg;gene_biotype=protein_coding;locus_tag=CP553_RS09060;old_locus_tag=CP553_09385
NZ_PCFD01000027.1	Protein Homology	CDS	27200	27463	.	-	0	ID=cds-WP_001832193.1;Parent=gene-CP553_RS09060;Dbxref=GenBank:WP_001832193.1;Name=WP_001832193.1;Ontology_term=GO:0006355,GO:0003700,GO:0046983;gbkey=CDS;gene=veg;go_function=DNA-binding transcription factor activity|0003700||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499044.1;locus_tag=CP553_RS09060;product=biofilm formation stimulator Veg;protein_id=WP_001832193.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	27563	28453	.	-	.	ID=gene-CP553_RS09065;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=CP553_RS09065;old_locus_tag=CP553_09390
NZ_PCFD01000027.1	Protein Homology	CDS	27563	28453	.	-	0	ID=cds-WP_001832224.1;Parent=gene-CP553_RS09065;Dbxref=GenBank:WP_001832224.1;Name=WP_001832224.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276768.1;locus_tag=CP553_RS09065;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001832224.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	28454	28999	.	-	.	ID=gene-CP553_RS09070;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=CP553_RS09070;old_locus_tag=CP553_09395
NZ_PCFD01000027.1	Protein Homology	CDS	28454	28999	.	-	0	ID=cds-WP_001832196.1;Parent=gene-CP553_RS09070;Dbxref=GenBank:WP_001832196.1;Name=WP_001832196.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832196.1;locus_tag=CP553_RS09070;product=ribonuclease M5;protein_id=WP_001832196.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	29206	29976	.	-	.	ID=gene-CP553_RS09075;Name=CP553_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09075;old_locus_tag=CP553_09400
NZ_PCFD01000027.1	Protein Homology	CDS	29206	29976	.	-	0	ID=cds-WP_001832218.1;Parent=gene-CP553_RS09075;Dbxref=GenBank:WP_001832218.1;Name=WP_001832218.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176425.1;locus_tag=CP553_RS09075;product=TatD family hydrolase;protein_id=WP_001832218.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	30004	31974	.	-	.	ID=gene-CP553_RS09080;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=CP553_RS09080;old_locus_tag=CP553_09405
NZ_PCFD01000027.1	Protein Homology	CDS	30004	31974	.	-	0	ID=cds-WP_001833059.1;Parent=gene-CP553_RS09080;Dbxref=GenBank:WP_001833059.1;Name=WP_001833059.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499040.1;locus_tag=CP553_RS09080;product=methionine--tRNA ligase;protein_id=WP_001833059.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	32184	33023	.	-	.	ID=gene-CP553_RS09085;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=CP553_RS09085;old_locus_tag=CP553_09410
NZ_PCFD01000027.1	Protein Homology	CDS	32184	33023	.	-	0	ID=cds-WP_001832235.1;Parent=gene-CP553_RS09085;Dbxref=GenBank:WP_001832235.1;Name=WP_001832235.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447877.1;locus_tag=CP553_RS09085;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_001832235.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	33025	33273	.	-	.	ID=gene-CP553_RS09090;Name=CP553_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09090;old_locus_tag=CP553_09415
NZ_PCFD01000027.1	Protein Homology	CDS	33025	33273	.	-	0	ID=cds-WP_001832208.1;Parent=gene-CP553_RS09090;Dbxref=GenBank:WP_001832208.1;Name=WP_001832208.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012095287.1;locus_tag=CP553_RS09090;product=GIY-YIG nuclease family protein;protein_id=WP_001832208.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	33266	33991	.	-	.	ID=gene-CP553_RS09095;Name=CP553_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09095;old_locus_tag=CP553_09420
NZ_PCFD01000027.1	Protein Homology	CDS	33266	33991	.	-	0	ID=cds-WP_001832222.1;Parent=gene-CP553_RS09095;Dbxref=GenBank:WP_001832222.1;Name=WP_001832222.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832222.1;locus_tag=CP553_RS09095;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_001832222.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	34087	34434	.	-	.	ID=gene-CP553_RS09100;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=CP553_RS09100;old_locus_tag=CP553_09425
NZ_PCFD01000027.1	Protein Homology	CDS	34087	34434	.	-	0	ID=cds-WP_001832238.1;Parent=gene-CP553_RS09100;Dbxref=GenBank:WP_001832238.1;Name=WP_001832238.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832238.1;locus_tag=CP553_RS09100;product=DNA replication initiation control protein YabA;protein_id=WP_001832238.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	34451	35254	.	-	.	ID=gene-CP553_RS09105;Name=CP553_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09105;old_locus_tag=CP553_09430
NZ_PCFD01000027.1	Protein Homology	CDS	34451	35254	.	-	0	ID=cds-WP_001832240.1;Parent=gene-CP553_RS09105;Dbxref=GenBank:WP_001832240.1;Name=WP_001832240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499034.1;locus_tag=CP553_RS09105;product=PSP1 domain-containing protein;protein_id=WP_001832240.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	35256	36182	.	-	.	ID=gene-CP553_RS09110;Name=CP553_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09110;old_locus_tag=CP553_09435
NZ_PCFD01000027.1	Protein Homology	CDS	35256	36182	.	-	0	ID=cds-WP_001832202.1;Parent=gene-CP553_RS09110;Dbxref=GenBank:WP_001832202.1;Name=WP_001832202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832202.1;locus_tag=CP553_RS09110;product=DNA polymerase III subunit;protein_id=WP_001832202.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	36488	36817	.	-	.	ID=gene-CP553_RS09115;Name=CP553_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09115;old_locus_tag=CP553_09440
NZ_PCFD01000027.1	Protein Homology	CDS	36488	36817	.	-	0	ID=cds-WP_001832200.1;Parent=gene-CP553_RS09115;Dbxref=GenBank:WP_001832200.1;Name=WP_001832200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467733.1;locus_tag=CP553_RS09115;product=cyclic-di-AMP receptor;protein_id=WP_001832200.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	36851	37462	.	-	.	ID=gene-CP553_RS09120;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=CP553_RS09120;old_locus_tag=CP553_09445
NZ_PCFD01000027.1	Protein Homology	CDS	36851	37462	.	-	0	ID=cds-WP_001832211.1;Parent=gene-CP553_RS09120;Dbxref=GenBank:WP_001832211.1;Name=WP_001832211.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012086256.1;locus_tag=CP553_RS09120;product=dTMP kinase;protein_id=WP_001832211.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	37466	38803	.	-	.	ID=gene-CP553_RS09125;Name=CP553_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09125;old_locus_tag=CP553_09450
NZ_PCFD01000027.1	Protein Homology	CDS	37466	38803	.	-	0	ID=cds-WP_001832221.1;Parent=gene-CP553_RS09125;Dbxref=GenBank:WP_001832221.1;Name=WP_001832221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494266.1;locus_tag=CP553_RS09125;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_001832221.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	38832	39365	.	-	.	ID=gene-CP553_RS09130;Name=CP553_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09130;old_locus_tag=CP553_09455
NZ_PCFD01000027.1	Protein Homology	CDS	38832	39365	.	-	0	ID=cds-WP_002440739.1;Parent=gene-CP553_RS09130;Dbxref=GenBank:WP_002440739.1;Name=WP_002440739.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368347.1;locus_tag=CP553_RS09130;product=GNAT family N-acetyltransferase;protein_id=WP_002440739.1;transl_table=11
NZ_PCFD01000027.1	RefSeq	gene	39842	39956	.	-	.	ID=gene-CP553_RS09135;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CP553_RS09135;old_locus_tag=CP553_09460
NZ_PCFD01000027.1	cmsearch	rRNA	39842	39956	.	-	.	ID=rna-CP553_RS09135;Parent=gene-CP553_RS09135;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS09135;product=5S ribosomal RNA
NZ_PCFD01000027.1	cmsearch	exon	39842	39956	.	-	.	ID=exon-CP553_RS09135-1;Parent=rna-CP553_RS09135;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS09135;product=5S ribosomal RNA
##sequence-region NZ_PCFD01000028.1 1 37526
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000028.1	RefSeq	region	1	37526	.	+	.	ID=NZ_PCFD01000028.1:1..37526;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000028.1	RefSeq	gene	90	836	.	+	.	ID=gene-CP553_RS09140;Name=CP553_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09140;old_locus_tag=CP553_09465
NZ_PCFD01000028.1	Protein Homology	CDS	90	836	.	+	0	ID=cds-WP_002485643.1;Parent=gene-CP553_RS09140;Dbxref=GenBank:WP_002485643.1;Name=WP_002485643.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485643.1;locus_tag=CP553_RS09140;product=helix-turn-helix domain-containing protein;protein_id=WP_002485643.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	854	2029	.	+	.	ID=gene-CP553_RS09145;Name=CP553_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09145;old_locus_tag=CP553_09470
NZ_PCFD01000028.1	Protein Homology	CDS	854	2029	.	+	0	ID=cds-WP_116843009.1;Parent=gene-CP553_RS09145;Dbxref=GenBank:WP_116843009.1;Name=WP_116843009.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476300.1;locus_tag=CP553_RS09145;product=tyrosine-type recombinase/integrase;protein_id=WP_116843009.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	2098	3717	.	-	.	ID=gene-CP553_RS09150;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=CP553_RS09150;old_locus_tag=CP553_09475
NZ_PCFD01000028.1	Protein Homology	CDS	2098	3717	.	-	0	ID=cds-WP_001830447.1;Parent=gene-CP553_RS09150;Dbxref=GenBank:WP_001830447.1;Name=WP_001830447.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500736.1;locus_tag=CP553_RS09150;product=chaperonin GroEL;protein_id=WP_001830447.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	3773	4057	.	-	.	ID=gene-CP553_RS09155;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=CP553_RS09155;old_locus_tag=CP553_09480
NZ_PCFD01000028.1	Protein Homology	CDS	3773	4057	.	-	0	ID=cds-WP_001830378.1;Parent=gene-CP553_RS09155;Dbxref=GenBank:WP_001830378.1;Name=WP_001830378.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500737.1;locus_tag=CP553_RS09155;product=co-chaperone GroES;protein_id=WP_001830378.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	4232	4972	.	+	.	ID=gene-CP553_RS09160;Name=mroQ;gbkey=Gene;gene=mroQ;gene_biotype=protein_coding;locus_tag=CP553_RS09160;old_locus_tag=CP553_09485
NZ_PCFD01000028.1	Protein Homology	CDS	4232	4972	.	+	0	ID=cds-WP_001830367.1;Parent=gene-CP553_RS09160;Dbxref=GenBank:WP_001830367.1;Name=WP_001830367.1;gbkey=CDS;gene=mroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467967.1;locus_tag=CP553_RS09160;product=intramembrane glutamic endopeptidase MroQ;protein_id=WP_001830367.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	5032	6396	.	-	.	ID=gene-CP553_RS12915;Name=sdrH;gbkey=Gene;gene=sdrH;gene_biotype=protein_coding;locus_tag=CP553_RS12915;old_locus_tag=CP553_09490
NZ_PCFD01000028.1	Protein Homology	CDS	5032	6396	.	-	0	ID=cds-WP_001832487.1;Parent=gene-CP553_RS12915;Dbxref=GenBank:WP_001832487.1;Name=WP_001832487.1;gbkey=CDS;gene=sdrH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485139.1;locus_tag=CP553_RS12915;product=MSCRAMM-like protein SdrH;protein_id=WP_001832487.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	6748	7533	.	+	.	ID=gene-CP553_RS09170;Name=CP553_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09170;old_locus_tag=CP553_09495
NZ_PCFD01000028.1	Protein Homology	CDS	6748	7533	.	+	0	ID=cds-WP_001830000.1;Parent=gene-CP553_RS09170;Dbxref=GenBank:WP_001830000.1;Name=WP_001830000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363187.1;locus_tag=CP553_RS09170;product=carbon-nitrogen family hydrolase;protein_id=WP_001830000.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	7914	7991	.	-	.	ID=gene-CP553_RS09175;Name=hld;gbkey=Gene;gene=hld;gene_biotype=protein_coding;locus_tag=CP553_RS09175;old_locus_tag=CP553_09500
NZ_PCFD01000028.1	Protein Homology	CDS	7914	7991	.	-	0	ID=cds-WP_002494082.1;Parent=gene-CP553_RS09175;Dbxref=GenBank:WP_002494082.1;Name=WP_002494082.1;gbkey=CDS;gene=hld;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494082.1;locus_tag=CP553_RS09175;product=delta-hemolysin;protein_id=WP_002494082.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	8309	8893	.	+	.	ID=gene-CP553_RS09180;Name=CP553_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09180;old_locus_tag=CP553_09505
NZ_PCFD01000028.1	Protein Homology	CDS	8309	8893	.	+	0	ID=cds-WP_001830005.1;Parent=gene-CP553_RS09180;Dbxref=GenBank:WP_001830005.1;Name=WP_001830005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830005.1;locus_tag=CP553_RS09180;product=accessory gene regulator AgrB;protein_id=WP_001830005.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	8877	9017	.	+	.	ID=gene-CP553_RS09185;Name=agrD;gbkey=Gene;gene=agrD;gene_biotype=protein_coding;locus_tag=CP553_RS09185;old_locus_tag=CP553_09510
NZ_PCFD01000028.1	Protein Homology	CDS	8877	9017	.	+	0	ID=cds-WP_001830021.1;Parent=gene-CP553_RS09185;Dbxref=GenBank:WP_001830021.1;Name=WP_001830021.1;gbkey=CDS;gene=agrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497212.1;locus_tag=CP553_RS09185;product=cyclic lactone autoinducer peptide AgrD;protein_id=WP_001830021.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	9044	10333	.	+	.	ID=gene-CP553_RS09190;Name=agrC;gbkey=Gene;gene=agrC;gene_biotype=protein_coding;locus_tag=CP553_RS09190;old_locus_tag=CP553_09515
NZ_PCFD01000028.1	Protein Homology	CDS	9044	10333	.	+	0	ID=cds-WP_002440376.1;Parent=gene-CP553_RS09190;Dbxref=GenBank:WP_002440376.1;Name=WP_002440376.1;gbkey=CDS;gene=agrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440376.1;locus_tag=CP553_RS09190;product=quorum-sensing sensor histidine kinase AgrC;protein_id=WP_002440376.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	10350	11066	.	+	.	ID=gene-CP553_RS09195;Name=agrA;gbkey=Gene;gene=agrA;gene_biotype=protein_coding;locus_tag=CP553_RS09195;old_locus_tag=CP553_09520
NZ_PCFD01000028.1	Protein Homology	CDS	10350	11066	.	+	0	ID=cds-WP_001829999.1;Parent=gene-CP553_RS09195;Dbxref=GenBank:WP_001829999.1;Name=WP_001829999.1;gbkey=CDS;gene=agrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1;locus_tag=CP553_RS09195;product=quorum-sensing response regulator AgrA;protein_id=WP_001829999.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	11134	12093	.	-	.	ID=gene-CP553_RS09200;Name=CP553_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09200;old_locus_tag=CP553_09525
NZ_PCFD01000028.1	Protein Homology	CDS	11134	12093	.	-	0	ID=cds-WP_001830023.1;Parent=gene-CP553_RS09200;Dbxref=GenBank:WP_001830023.1;Name=WP_001830023.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469008.1;locus_tag=CP553_RS09200;product=carbohydrate kinase family protein;protein_id=WP_001830023.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	12100	13572	.	-	.	ID=gene-CP553_RS09205;Name=CP553_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09205;old_locus_tag=CP553_09530
NZ_PCFD01000028.1	Protein Homology	CDS	12100	13572	.	-	0	ID=cds-WP_001830011.1;Parent=gene-CP553_RS09205;Dbxref=GenBank:WP_001830011.1;Name=WP_001830011.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363476.1;locus_tag=CP553_RS09205;product=sucrose-6-phosphate hydrolase;protein_id=WP_001830011.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	13832	14785	.	-	.	ID=gene-CP553_RS09210;Name=CP553_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09210;old_locus_tag=CP553_09540
NZ_PCFD01000028.1	Protein Homology	CDS	13832	14785	.	-	0	ID=cds-WP_001830022.1;Parent=gene-CP553_RS09210;Dbxref=GenBank:WP_001830022.1;Name=WP_001830022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503805.1;locus_tag=CP553_RS09210;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_001830022.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	14920	16170	.	-	.	ID=gene-CP553_RS09215;Name=CP553_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09215;old_locus_tag=CP553_09545
NZ_PCFD01000028.1	Protein Homology	CDS	14920	16170	.	-	0	ID=cds-WP_001830014.1;Parent=gene-CP553_RS09215;Dbxref=GenBank:WP_001830014.1;Name=WP_001830014.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494644.1;locus_tag=CP553_RS09215;product=ammonium transporter;protein_id=WP_001830014.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	16590	16814	.	-	.	ID=gene-CP553_RS09220;Name=CP553_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09220;old_locus_tag=CP553_09550
NZ_PCFD01000028.1	Protein Homology	CDS	16590	16814	.	-	0	ID=cds-WP_001830019.1;Parent=gene-CP553_RS09220;Dbxref=GenBank:WP_001830019.1;Name=WP_001830019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830019.1;locus_tag=CP553_RS09220;product=sulfurtransferase TusA family protein;protein_id=WP_001830019.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	16866	17918	.	-	.	ID=gene-CP553_RS09225;Name=CP553_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09225;old_locus_tag=CP553_09555
NZ_PCFD01000028.1	Protein Homology	CDS	16866	17918	.	-	0	ID=cds-WP_001829995.1;Parent=gene-CP553_RS09225;Dbxref=GenBank:WP_001829995.1;Name=WP_001829995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475007.1;locus_tag=CP553_RS09225;product=YeeE/YedE family protein;protein_id=WP_001829995.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	18004	18285	.	-	.	ID=gene-CP553_RS09230;Name=CP553_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09230;old_locus_tag=CP553_09560
NZ_PCFD01000028.1	Protein Homology	CDS	18004	18285	.	-	0	ID=cds-WP_002440364.1;Parent=gene-CP553_RS09230;Dbxref=GenBank:WP_002440364.1;Name=WP_002440364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440364.1;locus_tag=CP553_RS09230;product=hypothetical protein;protein_id=WP_002440364.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	18431	19066	.	-	.	ID=gene-CP553_RS09235;Name=CP553_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09235;old_locus_tag=CP553_09565
NZ_PCFD01000028.1	Protein Homology	CDS	18431	19066	.	-	0	ID=cds-WP_001830017.1;Parent=gene-CP553_RS09235;Dbxref=GenBank:WP_001830017.1;Name=WP_001830017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500754.1;locus_tag=CP553_RS09235;product=redox-sensing transcriptional repressor Rex;protein_id=WP_001830017.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	19414	21348	.	+	.	ID=gene-CP553_RS09240;Name=CP553_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09240;old_locus_tag=CP553_09570
NZ_PCFD01000028.1	Protein Homology	CDS	19414	21348	.	+	0	ID=cds-WP_002440362.1;Parent=gene-CP553_RS09240;Dbxref=GenBank:WP_002440362.1;Name=WP_002440362.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500755.1;locus_tag=CP553_RS09240;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_002440362.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	21690	23306	.	+	.	ID=gene-CP553_RS09245;Name=CP553_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09245;old_locus_tag=CP553_09575
NZ_PCFD01000028.1	Protein Homology	CDS	21690	23306	.	+	0	ID=cds-WP_001832478.1;Parent=gene-CP553_RS09245;Dbxref=GenBank:WP_001832478.1;Name=WP_001832478.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504804.1;locus_tag=CP553_RS09245;product=MutS-related protein;protein_id=WP_001832478.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	23389	24411	.	-	.	ID=gene-CP553_RS09250;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=CP553_RS09250;old_locus_tag=CP553_09580
NZ_PCFD01000028.1	Protein Homology	CDS	23389	24411	.	-	0	ID=cds-WP_001830015.1;Parent=gene-CP553_RS09250;Dbxref=GenBank:WP_001830015.1;Name=WP_001830015.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464894.1;locus_tag=CP553_RS09250;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001830015.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	24408	24869	.	-	.	ID=gene-CP553_RS09255;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=CP553_RS09255;old_locus_tag=CP553_09585
NZ_PCFD01000028.1	Protein Homology	CDS	24408	24869	.	-	0	ID=cds-WP_001829994.1;Parent=gene-CP553_RS09255;Dbxref=GenBank:WP_001829994.1;Name=WP_001829994.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495673.1;locus_tag=CP553_RS09255;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001829994.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	24842	25504	.	-	.	ID=gene-CP553_RS09260;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=CP553_RS09260;old_locus_tag=CP553_09590
NZ_PCFD01000028.1	Protein Homology	CDS	24842	25504	.	-	0	ID=cds-WP_001832485.1;Parent=gene-CP553_RS09260;Dbxref=GenBank:WP_001832485.1;Name=WP_001832485.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360111.1;locus_tag=CP553_RS09260;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001832485.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	25485	25946	.	-	.	ID=gene-CP553_RS09265;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=CP553_RS09265;old_locus_tag=CP553_09595
NZ_PCFD01000028.1	Protein Homology	CDS	25485	25946	.	-	0	ID=cds-WP_002455871.1;Parent=gene-CP553_RS09265;Dbxref=GenBank:WP_002455871.1;Name=WP_002455871.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504032.1;locus_tag=CP553_RS09265;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_002455871.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	26425	28113	.	+	.	ID=gene-CP553_RS09270;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=CP553_RS09270;old_locus_tag=CP553_09600
NZ_PCFD01000028.1	Protein Homology	CDS	26425	28113	.	+	0	ID=cds-WP_001830016.1;Parent=gene-CP553_RS09270;Dbxref=GenBank:WP_001830016.1;Name=WP_001830016.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500763.1;locus_tag=CP553_RS09270;product=dihydroxy-acid dehydratase;protein_id=WP_001830016.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	28148	29872	.	+	.	ID=gene-CP553_RS09275;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=CP553_RS09275;old_locus_tag=CP553_09605
NZ_PCFD01000028.1	Protein Homology	CDS	28148	29872	.	+	0	ID=cds-WP_049224284.1;Parent=gene-CP553_RS09275;Dbxref=GenBank:WP_049224284.1;Name=WP_049224284.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498148.1;locus_tag=CP553_RS09275;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_049224284.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	29872	30105	.	+	.	ID=gene-CP553_RS09280;Name=CP553_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09280;old_locus_tag=CP553_09610
NZ_PCFD01000028.1	Protein Homology	CDS	29872	30105	.	+	0	ID=cds-WP_001830009.1;Parent=gene-CP553_RS09280;Dbxref=GenBank:WP_001830009.1;Name=WP_001830009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468346.1;locus_tag=CP553_RS09280;product=ACT domain-containing protein;protein_id=WP_001830009.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	30222	31226	.	+	.	ID=gene-CP553_RS09285;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=CP553_RS09285;old_locus_tag=CP553_09615
NZ_PCFD01000028.1	Protein Homology	CDS	30222	31226	.	+	0	ID=cds-WP_001830020.1;Parent=gene-CP553_RS09285;Dbxref=GenBank:WP_001830020.1;Name=WP_001830020.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500766.1;locus_tag=CP553_RS09285;product=ketol-acid reductoisomerase;protein_id=WP_001830020.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	pseudogene	31249	32783	.	+	.	ID=gene-CP553_RS09290;Name=CP553_RS09290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS09290;old_locus_tag=CP553_09620;pseudo=true
NZ_PCFD01000028.1	Protein Homology	CDS	31249	32783	.	+	0	ID=cds-CP553_RS09290;Parent=gene-CP553_RS09290;Note=frameshifted;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464892.1;locus_tag=CP553_RS09290;product=2-isopropylmalate synthase;pseudo=true;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	32780	33823	.	+	.	ID=gene-CP553_RS09295;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=CP553_RS09295;old_locus_tag=CP553_09625
NZ_PCFD01000028.1	Protein Homology	CDS	32780	33823	.	+	0	ID=cds-WP_001830006.1;Parent=gene-CP553_RS09295;Dbxref=GenBank:WP_001830006.1;Name=WP_001830006.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468340.1;locus_tag=CP553_RS09295;product=3-isopropylmalate dehydrogenase;protein_id=WP_001830006.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	33839	35209	.	+	.	ID=gene-CP553_RS09300;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=CP553_RS09300;old_locus_tag=CP553_09630
NZ_PCFD01000028.1	Protein Homology	CDS	33839	35209	.	+	0	ID=cds-WP_001832489.1;Parent=gene-CP553_RS09300;Dbxref=GenBank:WP_001832489.1;Name=WP_001832489.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500769.1;locus_tag=CP553_RS09300;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_001832489.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	35210	35779	.	+	.	ID=gene-CP553_RS09305;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=CP553_RS09305;old_locus_tag=CP553_09635
NZ_PCFD01000028.1	Protein Homology	CDS	35210	35779	.	+	0	ID=cds-WP_001829996.1;Parent=gene-CP553_RS09305;Dbxref=GenBank:WP_001829996.1;Name=WP_001829996.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497515.1;locus_tag=CP553_RS09305;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_001829996.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	35794	37062	.	+	.	ID=gene-CP553_RS09310;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=CP553_RS09310;old_locus_tag=CP553_09640
NZ_PCFD01000028.1	Protein Homology	CDS	35794	37062	.	+	0	ID=cds-WP_001830018.1;Parent=gene-CP553_RS09310;Dbxref=GenBank:WP_001830018.1;Name=WP_001830018.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500771.1;locus_tag=CP553_RS09310;product=threonine ammonia-lyase IlvA;protein_id=WP_001830018.1;transl_table=11
NZ_PCFD01000028.1	RefSeq	gene	37403	37517	.	-	.	ID=gene-CP553_RS09315;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CP553_RS09315;old_locus_tag=CP553_09650
NZ_PCFD01000028.1	cmsearch	rRNA	37403	37517	.	-	.	ID=rna-CP553_RS09315;Parent=gene-CP553_RS09315;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS09315;product=5S ribosomal RNA
NZ_PCFD01000028.1	cmsearch	exon	37403	37517	.	-	.	ID=exon-CP553_RS09315-1;Parent=rna-CP553_RS09315;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS09315;product=5S ribosomal RNA
##sequence-region NZ_PCFD01000029.1 1 34243
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000029.1	RefSeq	region	1	34243	.	+	.	ID=NZ_PCFD01000029.1:1..34243;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000029.1	RefSeq	pseudogene	20	154	.	+	.	ID=gene-CP553_RS09320;Name=CP553_RS09320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS09320;old_locus_tag=CP553_09655;partial=true;pseudo=true;start_range=.,20
NZ_PCFD01000029.1	Protein Homology	CDS	20	154	.	+	0	ID=cds-CP553_RS09320;Parent=gene-CP553_RS09320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000167965.1;locus_tag=CP553_RS09320;partial=true;product=hypothetical protein;pseudo=true;start_range=.,20;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	523	1218	.	+	.	ID=gene-CP553_RS09325;Name=CP553_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09325;old_locus_tag=CP553_09660
NZ_PCFD01000029.1	Protein Homology	CDS	523	1218	.	+	0	ID=cds-WP_002438704.1;Parent=gene-CP553_RS09325;Dbxref=GenBank:WP_002438704.1;Name=WP_002438704.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502530.1;locus_tag=CP553_RS09325;product=HAD family hydrolase;protein_id=WP_002438704.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	1308	2612	.	-	.	ID=gene-CP553_RS09330;Name=CP553_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09330;old_locus_tag=CP553_09665
NZ_PCFD01000029.1	Protein Homology	CDS	1308	2612	.	-	0	ID=cds-WP_002438706.1;Parent=gene-CP553_RS09330;Dbxref=GenBank:WP_002438706.1;Name=WP_002438706.1;Note=This protein belongs to a clade of FMN-dependent monooxygenases%2C within a broader family of flavin-dependent oxidoreductases%2C the luciferase-like monooxygenase (LMM) family%2C some of whose members use coenzyme F420 rather than FMN.;Ontology_term=GO:0008152,GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494180.1;locus_tag=CP553_RS09330;product=NtaA/DmoA family FMN-dependent monooxygenase;protein_id=WP_002438706.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	2661	3413	.	-	.	ID=gene-CP553_RS09335;Name=CP553_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09335;old_locus_tag=CP553_09670
NZ_PCFD01000029.1	Protein Homology	CDS	2661	3413	.	-	0	ID=cds-WP_002456017.1;Parent=gene-CP553_RS09335;Dbxref=GenBank:WP_002456017.1;Name=WP_002456017.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486827.1;locus_tag=CP553_RS09335;product=3-oxoacyl-ACP reductase;protein_id=WP_002456017.1;transl_table=11
NZ_PCFD01000029.1	cmsearch	riboswitch	3515	3614	.	-	.	ID=id-NZ_PCFD01000029.1:3515..3614;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000029.1	RefSeq	gene	3769	4431	.	-	.	ID=gene-CP553_RS09340;Name=CP553_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09340;old_locus_tag=CP553_09675
NZ_PCFD01000029.1	Protein Homology	CDS	3769	4431	.	-	0	ID=cds-WP_002438709.1;Parent=gene-CP553_RS09340;Dbxref=GenBank:WP_002438709.1;Name=WP_002438709.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499111.1;locus_tag=CP553_RS09340;product=deoxynucleoside kinase;protein_id=WP_002438709.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	4424	5041	.	-	.	ID=gene-CP553_RS09345;Name=CP553_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09345;old_locus_tag=CP553_09680
NZ_PCFD01000029.1	Protein Homology	CDS	4424	5041	.	-	0	ID=cds-WP_002456016.1;Parent=gene-CP553_RS09345;Dbxref=GenBank:WP_002456016.1;Name=WP_002456016.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499112.1;locus_tag=CP553_RS09345;product=deoxynucleoside kinase;protein_id=WP_002456016.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	5108	5614	.	+	.	ID=gene-CP553_RS09350;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=CP553_RS09350;old_locus_tag=CP553_09685
NZ_PCFD01000029.1	Protein Homology	CDS	5108	5614	.	+	0	ID=cds-WP_002438711.1;Parent=gene-CP553_RS09350;Dbxref=GenBank:WP_002438711.1;Name=WP_002438711.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832295.1;locus_tag=CP553_RS09350;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_002438711.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	5782	6660	.	+	.	ID=gene-CP553_RS09355;Name=CP553_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09355;old_locus_tag=CP553_09690
NZ_PCFD01000029.1	Protein Homology	CDS	5782	6660	.	+	0	ID=cds-WP_002438712.1;Parent=gene-CP553_RS09355;Dbxref=GenBank:WP_002438712.1;Name=WP_002438712.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477520.1;locus_tag=CP553_RS09355;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_002438712.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	6665	7231	.	+	.	ID=gene-CP553_RS09360;Name=CP553_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09360;old_locus_tag=CP553_09695
NZ_PCFD01000029.1	Protein Homology	CDS	6665	7231	.	+	0	ID=cds-WP_002438713.1;Parent=gene-CP553_RS09360;Dbxref=GenBank:WP_002438713.1;Name=WP_002438713.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499115.1;locus_tag=CP553_RS09360;product=NADPH-dependent FMN reductase;protein_id=WP_002438713.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	7714	10470	.	+	.	ID=gene-CP553_RS09365;Name=sdrG;gbkey=Gene;gene=sdrG;gene_biotype=protein_coding;locus_tag=CP553_RS09365;old_locus_tag=CP553_09700
NZ_PCFD01000029.1	Protein Homology	CDS	7714	10470	.	+	0	ID=cds-WP_071813250.1;Parent=gene-CP553_RS09365;Dbxref=GenBank:WP_071813250.1;Name=WP_071813250.1;gbkey=CDS;gene=sdrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_216678632.1;locus_tag=CP553_RS09365;product=MSCRAMM family adhesin SdrG;protein_id=WP_071813250.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	10835	12337	.	-	.	ID=gene-CP553_RS09370;Name=CP553_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09370;old_locus_tag=CP553_09705
NZ_PCFD01000029.1	Protein Homology	CDS	10835	12337	.	-	0	ID=cds-WP_002456013.1;Parent=gene-CP553_RS09370;Dbxref=GenBank:WP_002456013.1;Name=WP_002456013.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832532.1;locus_tag=CP553_RS09370;product=glycosyltransferase;protein_id=WP_002456013.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	pseudogene	12708	12911	.	-	.	ID=gene-CP553_RS09375;Name=CP553_RS09375;end_range=12911,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS09375;old_locus_tag=CP553_09710;partial=true;pseudo=true
NZ_PCFD01000029.1	Protein Homology	CDS	12708	12911	.	-	0	ID=cds-CP553_RS09375;Parent=gene-CP553_RS09375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=12911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505646.1;locus_tag=CP553_RS09375;partial=true;product=arsenate reductase (thioredoxin);pseudo=true;transl_table=11
NZ_PCFD01000029.1	RefSeq	pseudogene	12914	13648	.	-	.	ID=gene-CP553_RS09380;Name=CP553_RS09380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS09380;old_locus_tag=CP553_09715;partial=true;pseudo=true;start_range=.,12914
NZ_PCFD01000029.1	Protein Homology	CDS	12914	13648	.	-	0	ID=cds-CP553_RS09380;Parent=gene-CP553_RS09380;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274434.1;locus_tag=CP553_RS09380;partial=true;product=ArsB/NhaD family transporter;pseudo=true;start_range=.,12914;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	14080	14958	.	-	.	ID=gene-CP553_RS09385;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=CP553_RS09385;old_locus_tag=CP553_09725
NZ_PCFD01000029.1	Protein Homology	CDS	14080	14958	.	-	0	ID=cds-WP_001832035.1;Parent=gene-CP553_RS09385;Dbxref=GenBank:WP_001832035.1;Name=WP_001832035.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445753.1;locus_tag=CP553_RS09385;product=GTP cyclohydrolase FolE2;protein_id=WP_001832035.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	14972	15637	.	-	.	ID=gene-CP553_RS09390;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=CP553_RS09390;old_locus_tag=CP553_09730
NZ_PCFD01000029.1	Protein Homology	CDS	14972	15637	.	-	0	ID=cds-WP_002438721.1;Parent=gene-CP553_RS09390;Dbxref=GenBank:WP_002438721.1;Name=WP_002438721.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB2;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499122.1;locus_tag=CP553_RS09390;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=WP_002438721.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	15653	16015	.	-	.	ID=gene-CP553_RS09395;Name=CP553_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09395;old_locus_tag=CP553_09735
NZ_PCFD01000029.1	Protein Homology	CDS	15653	16015	.	-	0	ID=cds-WP_002438722.1;Parent=gene-CP553_RS09395;Dbxref=GenBank:WP_002438722.1;Name=WP_002438722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499123.1;locus_tag=CP553_RS09395;product=YojF family protein;protein_id=WP_002438722.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	16300	17031	.	+	.	ID=gene-CP553_RS09400;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=CP553_RS09400;old_locus_tag=CP553_09740
NZ_PCFD01000029.1	Protein Homology	CDS	16300	17031	.	+	0	ID=cds-WP_001832077.1;Parent=gene-CP553_RS09400;Dbxref=GenBank:WP_001832077.1;Name=WP_001832077.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368285.1;locus_tag=CP553_RS09400;product=glucosamine-6-phosphate deaminase;protein_id=WP_001832077.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	17140	17772	.	+	.	ID=gene-CP553_RS09405;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=CP553_RS09405;old_locus_tag=CP553_09745
NZ_PCFD01000029.1	Protein Homology	CDS	17140	17772	.	+	0	ID=cds-WP_001832167.1;Parent=gene-CP553_RS09405;Dbxref=GenBank:WP_001832167.1;Name=WP_001832167.1;Ontology_term=GO:0005975,GO:0019647,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA,formaldehyde assimilation via ribulose monophosphate cycle|0019647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834869.1;locus_tag=CP553_RS09405;product=3-hexulose-6-phosphate synthase;protein_id=WP_001832167.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	17774	18322	.	+	.	ID=gene-CP553_RS09410;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=CP553_RS09410;old_locus_tag=CP553_09750
NZ_PCFD01000029.1	Protein Homology	CDS	17774	18322	.	+	0	ID=cds-WP_002456012.1;Parent=gene-CP553_RS09410;Dbxref=GenBank:WP_002456012.1;Name=WP_002456012.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362353.1;locus_tag=CP553_RS09410;product=6-phospho-3-hexuloisomerase;protein_id=WP_002456012.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	18444	19091	.	+	.	ID=gene-CP553_RS09415;Name=CP553_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09415;old_locus_tag=CP553_09755
NZ_PCFD01000029.1	Protein Homology	CDS	18444	19091	.	+	0	ID=cds-WP_002438724.1;Parent=gene-CP553_RS09415;Dbxref=GenBank:WP_002438724.1;Name=WP_002438724.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502017.1;locus_tag=CP553_RS09415;product=HAD family hydrolase;protein_id=WP_002438724.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	19197	20570	.	+	.	ID=gene-CP553_RS09420;Name=CP553_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09420;old_locus_tag=CP553_09760
NZ_PCFD01000029.1	Protein Homology	CDS	19197	20570	.	+	0	ID=cds-WP_002438725.1;Parent=gene-CP553_RS09420;Dbxref=GenBank:WP_002438725.1;Name=WP_002438725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477529.1;locus_tag=CP553_RS09420;product=long-chain fatty acid--CoA ligase;protein_id=WP_002438725.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	20573	21721	.	+	.	ID=gene-CP553_RS09425;Name=CP553_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09425;old_locus_tag=CP553_09765
NZ_PCFD01000029.1	Protein Homology	CDS	20573	21721	.	+	0	ID=cds-WP_001832124.1;Parent=gene-CP553_RS09425;Dbxref=GenBank:WP_001832124.1;Name=WP_001832124.1;Ontology_term=GO:0006635,GO:0003988;gbkey=CDS;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113849.1;locus_tag=CP553_RS09425;product=acetyl-CoA C-acyltransferase;protein_id=WP_001832124.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	21687	22049	.	+	.	ID=gene-CP553_RS09430;Name=CP553_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09430;old_locus_tag=CP553_09770
NZ_PCFD01000029.1	Protein Homology	CDS	21687	22049	.	+	0	ID=cds-WP_001832023.1;Parent=gene-CP553_RS09430;Dbxref=GenBank:WP_001832023.1;Name=WP_001832023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475544.1;locus_tag=CP553_RS09430;product=protein VraC;protein_id=WP_001832023.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	22053	22313	.	+	.	ID=gene-CP553_RS09435;Name=CP553_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09435;old_locus_tag=CP553_09775
NZ_PCFD01000029.1	Protein Homology	CDS	22053	22313	.	+	0	ID=cds-WP_001832117.1;Parent=gene-CP553_RS09435;Dbxref=GenBank:WP_001832117.1;Name=WP_001832117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363840.1;locus_tag=CP553_RS09435;product=hypothetical protein;protein_id=WP_001832117.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	22597	22776	.	-	.	ID=gene-CP553_RS09440;Name=vraX;gbkey=Gene;gene=vraX;gene_biotype=protein_coding;locus_tag=CP553_RS09440;old_locus_tag=CP553_09780
NZ_PCFD01000029.1	Protein Homology	CDS	22597	22776	.	-	0	ID=cds-WP_002438726.1;Parent=gene-CP553_RS09440;Dbxref=GenBank:WP_002438726.1;Name=WP_002438726.1;gbkey=CDS;gene=vraX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445763.1;locus_tag=CP553_RS09440;product=C1q-binding complement inhibitor VraX;protein_id=WP_002438726.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	23592	24422	.	-	.	ID=gene-CP553_RS09445;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=CP553_RS09445;old_locus_tag=CP553_09785
NZ_PCFD01000029.1	Protein Homology	CDS	23592	24422	.	-	0	ID=cds-WP_002458379.1;Parent=gene-CP553_RS09445;Dbxref=GenBank:WP_002458379.1;Name=WP_002458379.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=CP553_RS09445;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_002458379.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	24526	25506	.	-	.	ID=gene-CP553_RS09450;Name=CP553_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09450;old_locus_tag=CP553_09790
NZ_PCFD01000029.1	Protein Homology	CDS	24526	25506	.	-	0	ID=cds-WP_002438731.1;Parent=gene-CP553_RS09450;Dbxref=GenBank:WP_002438731.1;Name=WP_002438731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438731.1;locus_tag=CP553_RS09450;product=choloylglycine hydrolase family protein;protein_id=WP_002438731.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	25673	26323	.	+	.	ID=gene-CP553_RS09455;Name=CP553_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09455;old_locus_tag=CP553_09795
NZ_PCFD01000029.1	Protein Homology	CDS	25673	26323	.	+	0	ID=cds-WP_001832132.1;Parent=gene-CP553_RS09455;Dbxref=GenBank:WP_001832132.1;Name=WP_001832132.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456854.1;locus_tag=CP553_RS09455;product=uracil-DNA glycosylase;protein_id=WP_001832132.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	26333	26692	.	+	.	ID=gene-CP553_RS09460;Name=CP553_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09460;old_locus_tag=CP553_09800
NZ_PCFD01000029.1	Protein Homology	CDS	26333	26692	.	+	0	ID=cds-WP_002438732.1;Parent=gene-CP553_RS09460;Dbxref=GenBank:WP_002438732.1;Name=WP_002438732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832078.1;locus_tag=CP553_RS09460;product=DUF5327 family protein;protein_id=WP_002438732.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	26717	27085	.	+	.	ID=gene-CP553_RS09465;Name=CP553_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09465;old_locus_tag=CP553_09805
NZ_PCFD01000029.1	Protein Homology	CDS	26717	27085	.	+	0	ID=cds-WP_002497532.1;Parent=gene-CP553_RS09465;Dbxref=GenBank:WP_002497532.1;Name=WP_002497532.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499137.1;locus_tag=CP553_RS09465;product=DUF423 domain-containing protein;protein_id=WP_002497532.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	27201	28691	.	+	.	ID=gene-CP553_RS09470;Name=CP553_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09470;old_locus_tag=CP553_09810
NZ_PCFD01000029.1	Protein Homology	CDS	27201	28691	.	+	0	ID=cds-WP_001832531.1;Parent=gene-CP553_RS09470;Dbxref=GenBank:WP_001832531.1;Name=WP_001832531.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834667.1;locus_tag=CP553_RS09470;product=APC family permease;protein_id=WP_001832531.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	28845	29000	.	-	.	ID=gene-CP553_RS09475;Name=CP553_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09475
NZ_PCFD01000029.1	GeneMarkS-2+	CDS	28845	29000	.	-	0	ID=cds-WP_002470762.1;Parent=gene-CP553_RS09475;Dbxref=GenBank:WP_002470762.1;Name=WP_002470762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS09475;product=hypothetical protein;protein_id=WP_002470762.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	29362	29814	.	-	.	ID=gene-CP553_RS09480;Name=CP553_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09480;old_locus_tag=CP553_09815
NZ_PCFD01000029.1	Protein Homology	CDS	29362	29814	.	-	0	ID=cds-WP_001832133.1;Parent=gene-CP553_RS09480;Dbxref=GenBank:WP_001832133.1;Name=WP_001832133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499139.1;locus_tag=CP553_RS09480;product=threonine/serine exporter family protein;protein_id=WP_001832133.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	29827	30591	.	-	.	ID=gene-CP553_RS09485;Name=CP553_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09485;old_locus_tag=CP553_09820
NZ_PCFD01000029.1	Protein Homology	CDS	29827	30591	.	-	0	ID=cds-WP_001832039.1;Parent=gene-CP553_RS09485;Dbxref=GenBank:WP_001832039.1;Name=WP_001832039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360806.1;locus_tag=CP553_RS09485;product=threonine/serine exporter family protein;protein_id=WP_001832039.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	31093	31842	.	-	.	ID=gene-CP553_RS09490;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=CP553_RS09490;old_locus_tag=CP553_09825
NZ_PCFD01000029.1	Protein Homology	CDS	31093	31842	.	-	0	ID=cds-WP_001832113.1;Parent=gene-CP553_RS09490;Dbxref=GenBank:WP_001832113.1;Name=WP_001832113.1;Ontology_term=GO:0006785,GO:0004601;gbkey=CDS;gene=hemQ;go_function=peroxidase activity|0004601||IEA;go_process=heme B biosynthetic process|0006785||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503939.1;locus_tag=CP553_RS09490;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_001832113.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	32013	33002	.	+	.	ID=gene-CP553_RS09495;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=CP553_RS09495;old_locus_tag=CP553_09830
NZ_PCFD01000029.1	Protein Homology	CDS	32013	33002	.	+	0	ID=cds-WP_001832032.1;Parent=gene-CP553_RS09495;Dbxref=GenBank:WP_001832032.1;Name=WP_001832032.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499142.1;locus_tag=CP553_RS09495;product=phosphate acetyltransferase;protein_id=WP_001832032.1;transl_table=11
NZ_PCFD01000029.1	RefSeq	gene	33002	33841	.	+	.	ID=gene-CP553_RS09500;Name=CP553_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09500;old_locus_tag=CP553_09835
NZ_PCFD01000029.1	Protein Homology	CDS	33002	33841	.	+	0	ID=cds-WP_001832052.1;Parent=gene-CP553_RS09500;Dbxref=GenBank:WP_001832052.1;Name=WP_001832052.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834666.1;locus_tag=CP553_RS09500;product=lipoate--protein ligase family protein;protein_id=WP_001832052.1;transl_table=11
##sequence-region NZ_PCFD01000030.1 1 33800
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000030.1	RefSeq	region	1	33800	.	+	.	ID=NZ_PCFD01000030.1:1..33800;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000030.1	RefSeq	pseudogene	110	781	.	-	.	ID=gene-CP553_RS09505;Name=CP553_RS09505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS09505;old_locus_tag=CP553_09840;pseudo=true
NZ_PCFD01000030.1	Protein Homology	CDS	110	781	.	-	0	ID=cds-CP553_RS09505;Parent=gene-CP553_RS09505;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494449.1;locus_tag=CP553_RS09505;product=transposase;pseudo=true;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	1078	2205	.	-	.	ID=gene-CP553_RS09510;Name=CP553_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09510;old_locus_tag=CP553_09845
NZ_PCFD01000030.1	Protein Homology	CDS	1078	2205	.	-	0	ID=cds-WP_002439060.1;Parent=gene-CP553_RS09510;Dbxref=GenBank:WP_002439060.1;Name=WP_002439060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499446.1;locus_tag=CP553_RS09510;product=NADH-dependent flavin oxidoreductase;protein_id=WP_002439060.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	2525	2905	.	-	.	ID=gene-CP553_RS09515;Name=ygs;gbkey=Gene;gene=ygs;gene_biotype=protein_coding;locus_tag=CP553_RS09515;old_locus_tag=CP553_09850
NZ_PCFD01000030.1	Protein Homology	CDS	2525	2905	.	-	0	ID=cds-WP_001831918.1;Parent=gene-CP553_RS09515;Dbxref=GenBank:WP_001831918.1;Name=WP_001831918.1;gbkey=CDS;gene=ygs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831918.1;locus_tag=CP553_RS09515;product=S1 domain-containing post-transcriptional regulator Ygs;protein_id=WP_001831918.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	3202	3795	.	-	.	ID=gene-CP553_RS09520;Name=CP553_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09520;old_locus_tag=CP553_09855
NZ_PCFD01000030.1	Protein Homology	CDS	3202	3795	.	-	0	ID=cds-WP_001831922.1;Parent=gene-CP553_RS09520;Dbxref=GenBank:WP_001831922.1;Name=WP_001831922.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499444.1;locus_tag=CP553_RS09520;product=peptidylprolyl isomerase;protein_id=WP_001831922.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	3861	4241	.	+	.	ID=gene-CP553_RS09525;Name=CP553_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09525;old_locus_tag=CP553_09860
NZ_PCFD01000030.1	Protein Homology	CDS	3861	4241	.	+	0	ID=cds-WP_001831990.1;Parent=gene-CP553_RS09525;Dbxref=GenBank:WP_001831990.1;Name=WP_001831990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831990.1;locus_tag=CP553_RS09525;product=kinase-associated lipoprotein B;protein_id=WP_001831990.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	4435	6840	.	+	.	ID=gene-CP553_RS09530;Name=CP553_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09530;old_locus_tag=CP553_09865
NZ_PCFD01000030.1	Protein Homology	CDS	4435	6840	.	+	0	ID=cds-WP_001832516.1;Parent=gene-CP553_RS09530;Dbxref=GenBank:WP_001832516.1;Name=WP_001832516.1;Ontology_term=GO:0098662,GO:0051139;gbkey=CDS;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499442.1;locus_tag=CP553_RS09530;product=Na+/H+ antiporter subunit A;protein_id=WP_001832516.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	6833	7261	.	+	.	ID=gene-CP553_RS09535;Name=mnhB1;gbkey=Gene;gene=mnhB1;gene_biotype=protein_coding;locus_tag=CP553_RS09535;old_locus_tag=CP553_09870
NZ_PCFD01000030.1	Protein Homology	CDS	6833	7261	.	+	0	ID=cds-WP_001831999.1;Parent=gene-CP553_RS09535;Dbxref=GenBank:WP_001831999.1;Name=WP_001831999.1;gbkey=CDS;gene=mnhB1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499441.1;locus_tag=CP553_RS09535;product=Na+/H+ antiporter Mnh1 subunit B;protein_id=WP_001831999.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	7261	7608	.	+	.	ID=gene-CP553_RS09540;Name=mnhC1;gbkey=Gene;gene=mnhC1;gene_biotype=protein_coding;locus_tag=CP553_RS09540;old_locus_tag=CP553_09875
NZ_PCFD01000030.1	Protein Homology	CDS	7261	7608	.	+	0	ID=cds-WP_001831949.1;Parent=gene-CP553_RS09540;Dbxref=GenBank:WP_001831949.1;Name=WP_001831949.1;gbkey=CDS;gene=mnhC1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441784.1;locus_tag=CP553_RS09540;product=Na+/H+ antiporter Mnh1 subunit C;protein_id=WP_001831949.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	7595	9091	.	+	.	ID=gene-CP553_RS09545;Name=mnhD1;gbkey=Gene;gene=mnhD1;gene_biotype=protein_coding;locus_tag=CP553_RS09545;old_locus_tag=CP553_09880
NZ_PCFD01000030.1	Protein Homology	CDS	7595	9091	.	+	0	ID=cds-WP_001831894.1;Parent=gene-CP553_RS09545;Dbxref=GenBank:WP_001831894.1;Name=WP_001831894.1;gbkey=CDS;gene=mnhD1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499439.1;locus_tag=CP553_RS09545;product=Na+/H+ antiporter Mnh1 subunit D;protein_id=WP_001831894.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	9093	9572	.	+	.	ID=gene-CP553_RS09550;Name=CP553_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09550;old_locus_tag=CP553_09885
NZ_PCFD01000030.1	Protein Homology	CDS	9093	9572	.	+	0	ID=cds-WP_001831972.1;Parent=gene-CP553_RS09550;Dbxref=GenBank:WP_001831972.1;Name=WP_001831972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457195.1;locus_tag=CP553_RS09550;product=Na+/H+ antiporter subunit E;protein_id=WP_001831972.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	9572	9865	.	+	.	ID=gene-CP553_RS09555;Name=mnhF1;gbkey=Gene;gene=mnhF1;gene_biotype=protein_coding;locus_tag=CP553_RS09555;old_locus_tag=CP553_09890
NZ_PCFD01000030.1	Protein Homology	CDS	9572	9865	.	+	0	ID=cds-WP_001831940.1;Parent=gene-CP553_RS09555;Dbxref=GenBank:WP_001831940.1;Name=WP_001831940.1;gbkey=CDS;gene=mnhF1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831940.1;locus_tag=CP553_RS09555;product=Na+/H+ antiporter Mnh1 subunit F;protein_id=WP_001831940.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	9843	10199	.	+	.	ID=gene-CP553_RS09560;Name=mnhG1;gbkey=Gene;gene=mnhG1;gene_biotype=protein_coding;locus_tag=CP553_RS09560;old_locus_tag=CP553_09895
NZ_PCFD01000030.1	Protein Homology	CDS	9843	10199	.	+	0	ID=cds-WP_001831900.1;Parent=gene-CP553_RS09560;Dbxref=GenBank:WP_001831900.1;Name=WP_001831900.1;gbkey=CDS;gene=mnhG1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475041.1;locus_tag=CP553_RS09560;product=Na+/H+ antiporter Mnh1 subunit G;protein_id=WP_001831900.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	10504	11658	.	+	.	ID=gene-CP553_RS09565;Name=CP553_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09565;old_locus_tag=CP553_09900
NZ_PCFD01000030.1	Protein Homology	CDS	10504	11658	.	+	0	ID=cds-WP_002439051.1;Parent=gene-CP553_RS09565;Dbxref=GenBank:WP_002439051.1;Name=WP_002439051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464942.1;locus_tag=CP553_RS09565;product=NAD(P)-binding domain-containing protein;protein_id=WP_002439051.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	11717	12091	.	-	.	ID=gene-CP553_RS09570;Name=CP553_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09570;old_locus_tag=CP553_09905
NZ_PCFD01000030.1	Protein Homology	CDS	11717	12091	.	-	0	ID=cds-WP_001831899.1;Parent=gene-CP553_RS09570;Dbxref=GenBank:WP_001831899.1;Name=WP_001831899.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831899.1;locus_tag=CP553_RS09570;product=hotdog fold thioesterase;protein_id=WP_001831899.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	12114	13430	.	-	.	ID=gene-CP553_RS09575;Name=CP553_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09575;old_locus_tag=CP553_09910
NZ_PCFD01000030.1	Protein Homology	CDS	12114	13430	.	-	0	ID=cds-WP_002439048.1;Parent=gene-CP553_RS09575;Dbxref=GenBank:WP_002439048.1;Name=WP_002439048.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499433.1;locus_tag=CP553_RS09575;product=Na+/H+ antiporter family protein;protein_id=WP_002439048.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	13616	15097	.	-	.	ID=gene-CP553_RS09580;Name=CP553_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09580;old_locus_tag=CP553_09915
NZ_PCFD01000030.1	Protein Homology	CDS	13616	15097	.	-	0	ID=cds-WP_002439046.1;Parent=gene-CP553_RS09580;Dbxref=GenBank:WP_002439046.1;Name=WP_002439046.1;Ontology_term=GO:0006508,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470494.1;locus_tag=CP553_RS09580;product=M17 family metallopeptidase;protein_id=WP_002439046.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	15417	16625	.	-	.	ID=gene-CP553_RS09585;Name=CP553_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09585;old_locus_tag=CP553_09920
NZ_PCFD01000030.1	Protein Homology	CDS	15417	16625	.	-	0	ID=cds-WP_116843010.1;Parent=gene-CP553_RS09585;Dbxref=GenBank:WP_116843010.1;Name=WP_116843010.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499431.1;locus_tag=CP553_RS09585;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_116843010.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	16895	17254	.	-	.	ID=gene-CP553_RS09590;Name=CP553_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09590;old_locus_tag=CP553_09925
NZ_PCFD01000030.1	Protein Homology	CDS	16895	17254	.	-	0	ID=cds-WP_001832002.1;Parent=gene-CP553_RS09590;Dbxref=GenBank:WP_001832002.1;Name=WP_001832002.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499430.1;locus_tag=CP553_RS09590;product=HesB/IscA family protein;protein_id=WP_001832002.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	17284	17529	.	-	.	ID=gene-CP553_RS09595;Name=CP553_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09595;old_locus_tag=CP553_09930
NZ_PCFD01000030.1	Protein Homology	CDS	17284	17529	.	-	0	ID=cds-WP_001831896.1;Parent=gene-CP553_RS09595;Dbxref=GenBank:WP_001831896.1;Name=WP_001831896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831896.1;locus_tag=CP553_RS09595;product=YuzB family protein;protein_id=WP_001831896.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	17811	18875	.	+	.	ID=gene-CP553_RS09600;Name=CP553_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09600;old_locus_tag=CP553_09935
NZ_PCFD01000030.1	Protein Homology	CDS	17811	18875	.	+	0	ID=cds-WP_002439040.1;Parent=gene-CP553_RS09600;Dbxref=GenBank:WP_002439040.1;Name=WP_002439040.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499428.1;locus_tag=CP553_RS09600;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_002439040.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	19066	19386	.	-	.	ID=gene-CP553_RS09605;Name=CP553_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09605;old_locus_tag=CP553_09940
NZ_PCFD01000030.1	Protein Homology	CDS	19066	19386	.	-	0	ID=cds-WP_001831951.1;Parent=gene-CP553_RS09605;Dbxref=GenBank:WP_001831951.1;Name=WP_001831951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831951.1;locus_tag=CP553_RS09605;product=YuzD family protein;protein_id=WP_001831951.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	19486	19728	.	+	.	ID=gene-CP553_RS09610;Name=CP553_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09610;old_locus_tag=CP553_09945
NZ_PCFD01000030.1	Protein Homology	CDS	19486	19728	.	+	0	ID=cds-WP_001831958.1;Parent=gene-CP553_RS09610;Dbxref=GenBank:WP_001831958.1;Name=WP_001831958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499426.1;locus_tag=CP553_RS09610;product=NifU family protein;protein_id=WP_001831958.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	20026	21264	.	-	.	ID=gene-CP553_RS09615;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=CP553_RS09615;old_locus_tag=CP553_09950
NZ_PCFD01000030.1	Protein Homology	CDS	20026	21264	.	-	0	ID=cds-WP_001831904.1;Parent=gene-CP553_RS09615;Dbxref=GenBank:WP_001831904.1;Name=WP_001831904.1;Ontology_term=GO:0070394;gbkey=CDS;gene=dltD;go_process=lipoteichoic acid metabolic process|0070394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446031.1;locus_tag=CP553_RS09615;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_001831904.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	21261	21497	.	-	.	ID=gene-CP553_RS09620;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=CP553_RS09620;old_locus_tag=CP553_09955
NZ_PCFD01000030.1	Protein Homology	CDS	21261	21497	.	-	0	ID=cds-WP_001831996.1;Parent=gene-CP553_RS09620;Dbxref=GenBank:WP_001831996.1;Name=WP_001831996.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433359.1;locus_tag=CP553_RS09620;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=WP_001831996.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	21515	22729	.	-	.	ID=gene-CP553_RS09625;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=CP553_RS09625;old_locus_tag=CP553_09960
NZ_PCFD01000030.1	Protein Homology	CDS	21515	22729	.	-	0	ID=cds-WP_002439035.1;Parent=gene-CP553_RS09625;Dbxref=GenBank:WP_002439035.1;Name=WP_002439035.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499423.1;locus_tag=CP553_RS09625;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WP_002439035.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	22726	24183	.	-	.	ID=gene-CP553_RS09630;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=CP553_RS09630;old_locus_tag=CP553_09965
NZ_PCFD01000030.1	Protein Homology	CDS	22726	24183	.	-	0	ID=cds-WP_001831977.1;Parent=gene-CP553_RS09630;Dbxref=GenBank:WP_001831977.1;Name=WP_001831977.1;Ontology_term=GO:0019350,GO:0005524,GO:0047473;gbkey=CDS;gene=dltA;go_function=ATP binding|0005524||IEA,D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499422.1;locus_tag=CP553_RS09630;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_001831977.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	24199	24345	.	-	.	ID=gene-CP553_RS09635;Name=CP553_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09635;old_locus_tag=CP553_09970
NZ_PCFD01000030.1	Protein Homology	CDS	24199	24345	.	-	0	ID=cds-WP_001831913.1;Parent=gene-CP553_RS09635;Dbxref=GenBank:WP_001831913.1;Name=WP_001831913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831913.1;locus_tag=CP553_RS09635;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_001831913.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	24750	25721	.	-	.	ID=gene-CP553_RS09640;Name=CP553_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09640;old_locus_tag=CP553_09975
NZ_PCFD01000030.1	Protein Homology	CDS	24750	25721	.	-	0	ID=cds-WP_002439032.1;Parent=gene-CP553_RS09640;Dbxref=GenBank:WP_002439032.1;Name=WP_002439032.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831897.1;locus_tag=CP553_RS09640;product=2-hydroxyacid dehydrogenase;protein_id=WP_002439032.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	25763	26542	.	-	.	ID=gene-CP553_RS09645;Name=CP553_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09645;old_locus_tag=CP553_09980
NZ_PCFD01000030.1	Protein Homology	CDS	25763	26542	.	-	0	ID=cds-WP_001831998.1;Parent=gene-CP553_RS09645;Dbxref=GenBank:WP_001831998.1;Name=WP_001831998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499418.1;locus_tag=CP553_RS09645;product=TIGR01457 family HAD-type hydrolase;protein_id=WP_001831998.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	26542	26976	.	-	.	ID=gene-CP553_RS09650;Name=CP553_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09650;old_locus_tag=CP553_09985
NZ_PCFD01000030.1	Protein Homology	CDS	26542	26976	.	-	0	ID=cds-WP_001831932.1;Parent=gene-CP553_RS09650;Dbxref=GenBank:WP_001831932.1;Name=WP_001831932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831932.1;locus_tag=CP553_RS09650;product=DUF86 domain-containing protein;protein_id=WP_001831932.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	27095	27361	.	+	.	ID=gene-CP553_RS09655;Name=CP553_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09655;old_locus_tag=CP553_09990
NZ_PCFD01000030.1	Protein Homology	CDS	27095	27361	.	+	0	ID=cds-WP_002439025.1;Parent=gene-CP553_RS09655;Dbxref=GenBank:WP_002439025.1;Name=WP_002439025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831957.1;locus_tag=CP553_RS09655;product=DUF3055 domain-containing protein;protein_id=WP_002439025.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	27421	27810	.	-	.	ID=gene-CP553_RS09660;Name=CP553_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09660;old_locus_tag=CP553_09995
NZ_PCFD01000030.1	Protein Homology	CDS	27421	27810	.	-	0	ID=cds-WP_001831895.1;Parent=gene-CP553_RS09660;Dbxref=GenBank:WP_001831895.1;Name=WP_001831895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446025.1;locus_tag=CP553_RS09660;product=YutD family protein;protein_id=WP_001831895.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	27997	28911	.	-	.	ID=gene-CP553_RS09665;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=CP553_RS09665;old_locus_tag=CP553_10000
NZ_PCFD01000030.1	Protein Homology	CDS	27997	28911	.	-	0	ID=cds-WP_001831979.1;Parent=gene-CP553_RS09665;Dbxref=GenBank:WP_001831979.1;Name=WP_001831979.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497137.1;locus_tag=CP553_RS09665;product=lipoyl synthase;protein_id=WP_001831979.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	29000	30319	.	-	.	ID=gene-CP553_RS09670;Name=CP553_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09670;old_locus_tag=CP553_10005
NZ_PCFD01000030.1	Protein Homology	CDS	29000	30319	.	-	0	ID=cds-WP_002439019.1;Parent=gene-CP553_RS09670;Dbxref=GenBank:WP_002439019.1;Name=WP_002439019.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476492.1;locus_tag=CP553_RS09670;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_002439019.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	30405	31232	.	-	.	ID=gene-CP553_RS09675;Name=CP553_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09675;old_locus_tag=CP553_10010
NZ_PCFD01000030.1	Protein Homology	CDS	30405	31232	.	-	0	ID=cds-WP_002456119.1;Parent=gene-CP553_RS09675;Dbxref=GenBank:WP_002456119.1;Name=WP_002456119.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499412.1;locus_tag=CP553_RS09675;product=sulfite exporter TauE/SafE family protein;protein_id=WP_002456119.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	31245	32093	.	-	.	ID=gene-CP553_RS09680;Name=CP553_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09680;old_locus_tag=CP553_10015
NZ_PCFD01000030.1	Protein Homology	CDS	31245	32093	.	-	0	ID=cds-WP_001831962.1;Parent=gene-CP553_RS09680;Dbxref=GenBank:WP_001831962.1;Name=WP_001831962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499411.1;locus_tag=CP553_RS09680;product=DUF72 domain-containing protein;protein_id=WP_001831962.1;transl_table=11
NZ_PCFD01000030.1	RefSeq	gene	32460	33485	.	-	.	ID=gene-CP553_RS09685;Name=CP553_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09685;old_locus_tag=CP553_10020
NZ_PCFD01000030.1	Protein Homology	CDS	32460	33485	.	-	0	ID=cds-WP_002439013.1;Parent=gene-CP553_RS09685;Dbxref=GenBank:WP_002439013.1;Name=WP_002439013.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439013.1;locus_tag=CP553_RS09685;product=hemolysin family protein;protein_id=WP_002439013.1;transl_table=11
##sequence-region NZ_PCFD01000031.1 1 33526
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000031.1	RefSeq	region	1	33526	.	+	.	ID=NZ_PCFD01000031.1:1..33526;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000031.1	RefSeq	gene	286	1206	.	+	.	ID=gene-CP553_RS09690;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=CP553_RS09690;old_locus_tag=CP553_10025
NZ_PCFD01000031.1	Protein Homology	CDS	286	1206	.	+	0	ID=cds-WP_116843011.1;Parent=gene-CP553_RS09690;Dbxref=GenBank:WP_116843011.1;Name=WP_116843011.1;Ontology_term=GO:0016126,GO:0019287,GO:0004496,GO:0005524,GO:0005737;gbkey=CDS;gene=mvk;go_component=cytoplasm|0005737||IEA;go_function=mevalonate kinase activity|0004496||IEA,ATP binding|0005524||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499144.1;locus_tag=CP553_RS09690;product=mevalonate kinase;protein_id=WP_116843011.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	1211	2194	.	+	.	ID=gene-CP553_RS09695;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=CP553_RS09695;old_locus_tag=CP553_10030
NZ_PCFD01000031.1	Protein Homology	CDS	1211	2194	.	+	0	ID=cds-WP_001832151.1;Parent=gene-CP553_RS09695;Dbxref=GenBank:WP_001832151.1;Name=WP_001832151.1;Ontology_term=GO:0019287,GO:0004163,GO:0005829;gbkey=CDS;gene=mvaD;go_component=cytosol|0005829||IEA;go_function=diphosphomevalonate decarboxylase activity|0004163||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469363.1;locus_tag=CP553_RS09695;product=diphosphomevalonate decarboxylase;protein_id=WP_001832151.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	2207	3283	.	+	.	ID=gene-CP553_RS09700;Name=CP553_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09700;old_locus_tag=CP553_10035
NZ_PCFD01000031.1	Protein Homology	CDS	2207	3283	.	+	0	ID=cds-WP_001832075.1;Parent=gene-CP553_RS09700;Dbxref=GenBank:WP_001832075.1;Name=WP_001832075.1;Ontology_term=GO:0016126,GO:0019287,GO:0004631;gbkey=CDS;go_function=phosphomevalonate kinase activity|0004631||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499146.1;locus_tag=CP553_RS09700;product=phosphomevalonate kinase;protein_id=WP_001832075.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	3494	3835	.	+	.	ID=gene-CP553_RS09705;Name=CP553_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09705;old_locus_tag=CP553_10040
NZ_PCFD01000031.1	Protein Homology	CDS	3494	3835	.	+	0	ID=cds-WP_002438738.1;Parent=gene-CP553_RS09705;Dbxref=GenBank:WP_002438738.1;Name=WP_002438738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499147.1;locus_tag=CP553_RS09705;product=DUF1450 domain-containing protein;protein_id=WP_002438738.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	4160	5491	.	-	.	ID=gene-CP553_RS09710;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=CP553_RS09710;old_locus_tag=CP553_10045
NZ_PCFD01000031.1	Protein Homology	CDS	4160	5491	.	-	0	ID=cds-WP_002456011.1;Parent=gene-CP553_RS09710;Dbxref=GenBank:WP_002456011.1;Name=WP_002456011.1;Ontology_term=GO:0016668,GO:0050660;gbkey=CDS;gene=merA;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456011.1;locus_tag=CP553_RS09710;product=hypothiocyanous acid reductase MerA;protein_id=WP_002456011.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	5496	5918	.	-	.	ID=gene-CP553_RS09715;Name=hypR;gbkey=Gene;gene=hypR;gene_biotype=protein_coding;locus_tag=CP553_RS09715;old_locus_tag=CP553_10050
NZ_PCFD01000031.1	Protein Homology	CDS	5496	5918	.	-	0	ID=cds-WP_001832072.1;Parent=gene-CP553_RS09715;Dbxref=GenBank:WP_001832072.1;Name=WP_001832072.1;gbkey=CDS;gene=hypR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475548.1;locus_tag=CP553_RS09715;product=redox-sensitive transcriptional regulator HypR;protein_id=WP_001832072.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	6075	7013	.	+	.	ID=gene-CP553_RS09720;Name=CP553_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09720;old_locus_tag=CP553_10055
NZ_PCFD01000031.1	Protein Homology	CDS	6075	7013	.	+	0	ID=cds-WP_001832085.1;Parent=gene-CP553_RS09720;Dbxref=GenBank:WP_001832085.1;Name=WP_001832085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491422.1;locus_tag=CP553_RS09720;product=aldo/keto reductase;protein_id=WP_001832085.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	7474	10155	.	+	.	ID=gene-CP553_RS09725;Name=CP553_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09725;old_locus_tag=CP553_10060
NZ_PCFD01000031.1	Protein Homology	CDS	7474	10155	.	+	0	ID=cds-WP_001832045.1;Parent=gene-CP553_RS09725;Dbxref=GenBank:WP_001832045.1;Name=WP_001832045.1;Ontology_term=GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012087791.1;locus_tag=CP553_RS09725;product=MMPL family transporter;protein_id=WP_001832045.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	10179	11123	.	+	.	ID=gene-CP553_RS09730;Name=CP553_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09730;old_locus_tag=CP553_10065
NZ_PCFD01000031.1	Protein Homology	CDS	10179	11123	.	+	0	ID=cds-WP_001832065.1;Parent=gene-CP553_RS09730;Dbxref=GenBank:WP_001832065.1;Name=WP_001832065.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832065.1;locus_tag=CP553_RS09730;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_001832065.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	11473	12042	.	+	.	ID=gene-CP553_RS09735;Name=CP553_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09735;old_locus_tag=CP553_10070
NZ_PCFD01000031.1	Protein Homology	CDS	11473	12042	.	+	0	ID=cds-WP_001832161.1;Parent=gene-CP553_RS09735;Dbxref=GenBank:WP_001832161.1;Name=WP_001832161.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012087790.1;locus_tag=CP553_RS09735;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001832161.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	12253	12927	.	+	.	ID=gene-CP553_RS09740;Name=CP553_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09740;old_locus_tag=CP553_10075
NZ_PCFD01000031.1	Protein Homology	CDS	12253	12927	.	+	0	ID=cds-WP_001832122.1;Parent=gene-CP553_RS09740;Dbxref=GenBank:WP_001832122.1;Name=WP_001832122.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS09740;product=IS6 family transposase;protein_id=WP_001832122.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	13377	13853	.	+	.	ID=gene-CP553_RS09745;Name=CP553_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09745;old_locus_tag=CP553_10080
NZ_PCFD01000031.1	Protein Homology	CDS	13377	13853	.	+	0	ID=cds-WP_116843012.1;Parent=gene-CP553_RS09745;Dbxref=GenBank:WP_116843012.1;Name=WP_116843012.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495271.1;locus_tag=CP553_RS09745;product=GNAT family N-acetyltransferase;protein_id=WP_116843012.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	13945	15243	.	+	.	ID=gene-CP553_RS09750;Name=CP553_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09750;old_locus_tag=CP553_10085
NZ_PCFD01000031.1	Protein Homology	CDS	13945	15243	.	+	0	ID=cds-WP_002438750.1;Parent=gene-CP553_RS09750;Dbxref=GenBank:WP_002438750.1;Name=WP_002438750.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487628.1;locus_tag=CP553_RS09750;product=HD domain-containing protein;protein_id=WP_002438750.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	15300	15806	.	+	.	ID=gene-CP553_RS09755;Name=CP553_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09755;old_locus_tag=CP553_10090
NZ_PCFD01000031.1	Protein Homology	CDS	15300	15806	.	+	0	ID=cds-WP_002438753.1;Parent=gene-CP553_RS09755;Dbxref=GenBank:WP_002438753.1;Name=WP_002438753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458364.1;locus_tag=CP553_RS09755;product=YwhD family protein;protein_id=WP_002438753.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	15891	17078	.	-	.	ID=gene-CP553_RS09760;Name=larC;gbkey=Gene;gene=larC;gene_biotype=protein_coding;locus_tag=CP553_RS09760;old_locus_tag=CP553_10095
NZ_PCFD01000031.1	Protein Homology	CDS	15891	17078	.	-	0	ID=cds-WP_002438754.1;Parent=gene-CP553_RS09760;Dbxref=GenBank:WP_002438754.1;Name=WP_002438754.1;gbkey=CDS;gene=larC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503102.1;locus_tag=CP553_RS09760;product=nickel pincer cofactor biosynthesis protein LarC;protein_id=WP_002438754.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	17075	17851	.	-	.	ID=gene-CP553_RS09765;Name=larB;gbkey=Gene;gene=larB;gene_biotype=protein_coding;locus_tag=CP553_RS09765;old_locus_tag=CP553_10100
NZ_PCFD01000031.1	Protein Homology	CDS	17075	17851	.	-	0	ID=cds-WP_002438755.1;Parent=gene-CP553_RS09765;Dbxref=GenBank:WP_002438755.1;Name=WP_002438755.1;Ontology_term=GO:0016787;gbkey=CDS;gene=larB;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470587.1;locus_tag=CP553_RS09765;product=nickel pincer cofactor biosynthesis protein LarB;protein_id=WP_002438755.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	17866	18693	.	-	.	ID=gene-CP553_RS09770;Name=larE;gbkey=Gene;gene=larE;gene_biotype=protein_coding;locus_tag=CP553_RS09770;old_locus_tag=CP553_10105
NZ_PCFD01000031.1	Protein Homology	CDS	17866	18693	.	-	0	ID=cds-WP_002468728.1;Parent=gene-CP553_RS09770;Dbxref=GenBank:WP_002468728.1;Name=WP_002468728.1;Ontology_term=GO:0016783;gbkey=CDS;gene=larE;go_function=sulfurtransferase activity|0016783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362941.1;locus_tag=CP553_RS09770;product=ATP-dependent sacrificial sulfur transferase LarE;protein_id=WP_002468728.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	18713	19981	.	-	.	ID=gene-CP553_RS09775;Name=larA;gbkey=Gene;gene=larA;gene_biotype=protein_coding;locus_tag=CP553_RS09775;old_locus_tag=CP553_10110
NZ_PCFD01000031.1	Protein Homology	CDS	18713	19981	.	-	0	ID=cds-WP_002456009.1;Parent=gene-CP553_RS09775;Dbxref=GenBank:WP_002456009.1;Name=WP_002456009.1;Ontology_term=GO:0050043;gbkey=CDS;gene=larA;go_function=lactate racemase activity|0050043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468701.1;locus_tag=CP553_RS09775;product=nickel-dependent lactate racemase;protein_id=WP_002456009.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	20271	21293	.	+	.	ID=gene-CP553_RS09780;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=CP553_RS09780;old_locus_tag=CP553_10115
NZ_PCFD01000031.1	Protein Homology	CDS	20271	21293	.	+	0	ID=cds-WP_002438761.1;Parent=gene-CP553_RS09780;Dbxref=GenBank:WP_002438761.1;Name=WP_002438761.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834665.1;locus_tag=CP553_RS09780;product=alcohol dehydrogenase AdhP;protein_id=WP_002438761.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	pseudogene	21374	21765	.	+	.	ID=gene-CP553_RS09785;Name=CP553_RS09785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS09785;pseudo=true
NZ_PCFD01000031.1	Protein Homology	CDS	21374	21765	.	+	0	ID=cds-CP553_RS09785;Parent=gene-CP553_RS09785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445784.1;locus_tag=CP553_RS09785;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	22255	22671	.	+	.	ID=gene-CP553_RS09790;Name=CP553_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09790;old_locus_tag=CP553_10135
NZ_PCFD01000031.1	Protein Homology	CDS	22255	22671	.	+	0	ID=cds-WP_002456007.1;Parent=gene-CP553_RS09790;Dbxref=GenBank:WP_002456007.1;Name=WP_002456007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832036.1;locus_tag=CP553_RS09790;product=DUF1934 domain-containing protein;protein_id=WP_002456007.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	22668	24329	.	+	.	ID=gene-CP553_RS09795;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CP553_RS09795;old_locus_tag=CP553_10140
NZ_PCFD01000031.1	Protein Homology	CDS	22668	24329	.	+	0	ID=cds-WP_002438772.1;Parent=gene-CP553_RS09795;Dbxref=GenBank:WP_002438772.1;Name=WP_002438772.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499174.1;locus_tag=CP553_RS09795;product=arginine--tRNA ligase;protein_id=WP_002438772.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	24586	25221	.	+	.	ID=gene-CP553_RS09800;Name=CP553_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09800;old_locus_tag=CP553_10145
NZ_PCFD01000031.1	Protein Homology	CDS	24586	25221	.	+	0	ID=cds-WP_002456006.1;Parent=gene-CP553_RS09800;Dbxref=GenBank:WP_002456006.1;Name=WP_002456006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361842.1;locus_tag=CP553_RS09800;product=endonuclease III domain-containing protein;protein_id=WP_002456006.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	25276	26028	.	+	.	ID=gene-CP553_RS09805;Name=CP553_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09805;old_locus_tag=CP553_10150
NZ_PCFD01000031.1	Protein Homology	CDS	25276	26028	.	+	0	ID=cds-WP_002438776.1;Parent=gene-CP553_RS09805;Dbxref=GenBank:WP_002438776.1;Name=WP_002438776.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501445.1;locus_tag=CP553_RS09805;product=MerR family transcriptional regulator;protein_id=WP_002438776.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	26477	27364	.	+	.	ID=gene-CP553_RS09810;Name=CP553_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09810;old_locus_tag=CP553_10160
NZ_PCFD01000031.1	Protein Homology	CDS	26477	27364	.	+	0	ID=cds-WP_002456004.1;Parent=gene-CP553_RS09810;Dbxref=GenBank:WP_002456004.1;Name=WP_002456004.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505386.1;locus_tag=CP553_RS09810;product=ABC transporter substrate-binding protein;protein_id=WP_002456004.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	27643	28587	.	+	.	ID=gene-CP553_RS09815;Name=CP553_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09815;old_locus_tag=CP553_10165
NZ_PCFD01000031.1	Protein Homology	CDS	27643	28587	.	+	0	ID=cds-WP_002456003.1;Parent=gene-CP553_RS09815;Dbxref=GenBank:WP_002456003.1;Name=WP_002456003.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484565.1;locus_tag=CP553_RS09815;product=FecCD family ABC transporter permease;protein_id=WP_002456003.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	28646	29374	.	+	.	ID=gene-CP553_RS09820;Name=CP553_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09820;old_locus_tag=CP553_10170
NZ_PCFD01000031.1	Protein Homology	CDS	28646	29374	.	+	0	ID=cds-WP_001832134.1;Parent=gene-CP553_RS09820;Dbxref=GenBank:WP_001832134.1;Name=WP_001832134.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832134.1;locus_tag=CP553_RS09820;product=HAD family hydrolase;protein_id=WP_001832134.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	29352	30149	.	+	.	ID=gene-CP553_RS09825;Name=CP553_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09825;old_locus_tag=CP553_10175
NZ_PCFD01000031.1	Protein Homology	CDS	29352	30149	.	+	0	ID=cds-WP_002438782.1;Parent=gene-CP553_RS09825;Dbxref=GenBank:WP_002438782.1;Name=WP_002438782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498032.1;locus_tag=CP553_RS09825;product=alpha/beta fold hydrolase;protein_id=WP_002438782.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	30352	30861	.	+	.	ID=gene-CP553_RS09830;Name=CP553_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09830;old_locus_tag=CP553_10180
NZ_PCFD01000031.1	Protein Homology	CDS	30352	30861	.	+	0	ID=cds-WP_002438783.1;Parent=gene-CP553_RS09830;Dbxref=GenBank:WP_002438783.1;Name=WP_002438783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491441.1;locus_tag=CP553_RS09830;product=SA0570 family protein;protein_id=WP_002438783.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	31106	31825	.	+	.	ID=gene-CP553_RS09835;Name=CP553_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09835;old_locus_tag=CP553_10185
NZ_PCFD01000031.1	Protein Homology	CDS	31106	31825	.	+	0	ID=cds-WP_002456002.1;Parent=gene-CP553_RS09835;Dbxref=GenBank:WP_002456002.1;Name=WP_002456002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487621.1;locus_tag=CP553_RS09835;product=hypothetical protein;protein_id=WP_002456002.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	32034	32810	.	+	.	ID=gene-CP553_RS09840;Name=CP553_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09840;old_locus_tag=CP553_10190
NZ_PCFD01000031.1	Protein Homology	CDS	32034	32810	.	+	0	ID=cds-WP_001832174.1;Parent=gene-CP553_RS09840;Dbxref=GenBank:WP_001832174.1;Name=WP_001832174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485367.1;locus_tag=CP553_RS09840;product=alpha/beta fold hydrolase;protein_id=WP_001832174.1;transl_table=11
NZ_PCFD01000031.1	RefSeq	gene	32983	33357	.	-	.	ID=gene-CP553_RS09845;Name=sarA;gbkey=Gene;gene=sarA;gene_biotype=protein_coding;locus_tag=CP553_RS09845;old_locus_tag=CP553_10195
NZ_PCFD01000031.1	Protein Homology	CDS	32983	33357	.	-	0	ID=cds-WP_001832055.1;Parent=gene-CP553_RS09845;Dbxref=GenBank:WP_001832055.1;Name=WP_001832055.1;gbkey=CDS;gene=sarA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499183.1;locus_tag=CP553_RS09845;product=global transcriptional regulator SarA;protein_id=WP_001832055.1;transl_table=11
##sequence-region NZ_PCFD01000032.1 1 30496
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000032.1	RefSeq	region	1	30496	.	+	.	ID=NZ_PCFD01000032.1:1..30496;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000032.1	RefSeq	pseudogene	1	308	.	-	.	ID=gene-CP553_RS09850;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=CP553_RS09850;old_locus_tag=CP553_10200;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000032.1	Protein Homology	CDS	1	308	.	-	0	ID=cds-CP553_RS09850;Parent=gene-CP553_RS09850;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=CP553_RS09850;partial=true;product=IS200/IS605-like element ISSep3 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	606	1082	.	-	.	ID=gene-CP553_RS09855;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=CP553_RS09855;old_locus_tag=CP553_10205
NZ_PCFD01000032.1	Protein Homology	CDS	606	1082	.	-	0	ID=cds-WP_001830881.1;Parent=gene-CP553_RS09855;Dbxref=GenBank:WP_001830881.1;Name=WP_001830881.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500223.1;locus_tag=CP553_RS09855;product=transcription elongation factor GreA;protein_id=WP_001830881.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	1113	1736	.	-	.	ID=gene-CP553_RS09860;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=CP553_RS09860;old_locus_tag=CP553_10210
NZ_PCFD01000032.1	Protein Homology	CDS	1113	1736	.	-	0	ID=cds-WP_001830824.1;Parent=gene-CP553_RS09860;Dbxref=GenBank:WP_001830824.1;Name=WP_001830824.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500224.1;locus_tag=CP553_RS09860;product=uridine kinase;protein_id=WP_001830824.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	1736	3004	.	-	.	ID=gene-CP553_RS09865;Name=CP553_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09865;old_locus_tag=CP553_10215
NZ_PCFD01000032.1	Protein Homology	CDS	1736	3004	.	-	0	ID=cds-WP_001830748.1;Parent=gene-CP553_RS09865;Dbxref=GenBank:WP_001830748.1;Name=WP_001830748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190454.1;locus_tag=CP553_RS09865;product=peptidase U32 family protein;protein_id=WP_001830748.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	3022	3945	.	-	.	ID=gene-CP553_RS09870;Name=CP553_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09870;old_locus_tag=CP553_10220
NZ_PCFD01000032.1	Protein Homology	CDS	3022	3945	.	-	0	ID=cds-WP_002456168.1;Parent=gene-CP553_RS09870;Dbxref=GenBank:WP_002456168.1;Name=WP_002456168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500226.1;locus_tag=CP553_RS09870;product=peptidase U32 family protein;protein_id=WP_002456168.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	3948	4583	.	-	.	ID=gene-CP553_RS09875;Name=CP553_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09875;old_locus_tag=CP553_10225
NZ_PCFD01000032.1	Protein Homology	CDS	3948	4583	.	-	0	ID=cds-WP_001830827.1;Parent=gene-CP553_RS09875;Dbxref=GenBank:WP_001830827.1;Name=WP_001830827.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457769.1;locus_tag=CP553_RS09875;product=O-methyltransferase;protein_id=WP_001830827.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	5012	5320	.	-	.	ID=gene-CP553_RS09880;Name=CP553_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09880;old_locus_tag=CP553_10230
NZ_PCFD01000032.1	Protein Homology	CDS	5012	5320	.	-	0	ID=cds-WP_001830855.1;Parent=gene-CP553_RS09880;Dbxref=GenBank:WP_001830855.1;Name=WP_001830855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500228.1;locus_tag=CP553_RS09880;product=DUF1292 domain-containing protein;protein_id=WP_001830855.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	5335	5763	.	-	.	ID=gene-CP553_RS09885;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=CP553_RS09885;old_locus_tag=CP553_10235
NZ_PCFD01000032.1	Protein Homology	CDS	5335	5763	.	-	0	ID=cds-WP_001830837.1;Parent=gene-CP553_RS09885;Dbxref=GenBank:WP_001830837.1;Name=WP_001830837.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830837.1;locus_tag=CP553_RS09885;product=Holliday junction resolvase RuvX;protein_id=WP_001830837.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	5765	6025	.	-	.	ID=gene-CP553_RS09890;Name=CP553_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09890;old_locus_tag=CP553_10240
NZ_PCFD01000032.1	Protein Homology	CDS	5765	6025	.	-	0	ID=cds-WP_001830883.1;Parent=gene-CP553_RS09890;Dbxref=GenBank:WP_001830883.1;Name=WP_001830883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489645.1;locus_tag=CP553_RS09890;product=IreB family regulatory phosphoprotein;protein_id=WP_001830883.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	6089	8719	.	-	.	ID=gene-CP553_RS09895;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=CP553_RS09895;old_locus_tag=CP553_10245
NZ_PCFD01000032.1	Protein Homology	CDS	6089	8719	.	-	0	ID=cds-WP_002440135.1;Parent=gene-CP553_RS09895;Dbxref=GenBank:WP_002440135.1;Name=WP_002440135.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500231.1;locus_tag=CP553_RS09895;product=alanine--tRNA ligase;protein_id=WP_002440135.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	9048	11480	.	-	.	ID=gene-CP553_RS09900;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=protein_coding;locus_tag=CP553_RS09900;old_locus_tag=CP553_10250
NZ_PCFD01000032.1	Protein Homology	CDS	9048	11480	.	-	0	ID=cds-WP_002440136.1;Parent=gene-CP553_RS09900;Dbxref=GenBank:WP_002440136.1;Name=WP_002440136.1;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830904.1;locus_tag=CP553_RS09900;product=SF1B family DNA helicase RecD2;protein_id=WP_002440136.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	11482	12150	.	-	.	ID=gene-CP553_RS09905;Name=CP553_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09905;old_locus_tag=CP553_10255
NZ_PCFD01000032.1	Protein Homology	CDS	11482	12150	.	-	0	ID=cds-WP_001832695.1;Parent=gene-CP553_RS09905;Dbxref=GenBank:WP_001832695.1;Name=WP_001832695.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494289.1;locus_tag=CP553_RS09905;product=tetratricopeptide repeat protein;protein_id=WP_001832695.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	12313	13431	.	-	.	ID=gene-CP553_RS09910;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=CP553_RS09910;old_locus_tag=CP553_10260
NZ_PCFD01000032.1	Protein Homology	CDS	12313	13431	.	-	0	ID=cds-WP_001830892.1;Parent=gene-CP553_RS09910;Dbxref=GenBank:WP_001830892.1;Name=WP_001830892.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830892.1;locus_tag=CP553_RS09910;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_001830892.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	13431	14573	.	-	.	ID=gene-CP553_RS09915;Name=CP553_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09915;old_locus_tag=CP553_10265
NZ_PCFD01000032.1	Protein Homology	CDS	13431	14573	.	-	0	ID=cds-WP_001830848.1;Parent=gene-CP553_RS09915;Dbxref=GenBank:WP_001830848.1;Name=WP_001830848.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500236.1;locus_tag=CP553_RS09915;product=cysteine desulfurase family protein;protein_id=WP_001830848.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	14816	15811	.	+	.	ID=gene-CP553_RS09920;Name=CP553_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09920;old_locus_tag=CP553_10270
NZ_PCFD01000032.1	Protein Homology	CDS	14816	15811	.	+	0	ID=cds-WP_001830781.1;Parent=gene-CP553_RS09920;Dbxref=GenBank:WP_001830781.1;Name=WP_001830781.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464637.1;locus_tag=CP553_RS09920;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_001830781.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	16011	16154	.	-	.	ID=gene-CP553_RS09925;Name=CP553_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09925;old_locus_tag=CP553_10275
NZ_PCFD01000032.1	Protein Homology	CDS	16011	16154	.	-	0	ID=cds-WP_001830746.1;Parent=gene-CP553_RS09925;Dbxref=GenBank:WP_001830746.1;Name=WP_001830746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500462.1;locus_tag=CP553_RS09925;product=SAS049 family protein;protein_id=WP_001830746.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	16340	16762	.	-	.	ID=gene-CP553_RS09930;Name=cymR;gbkey=Gene;gene=cymR;gene_biotype=protein_coding;locus_tag=CP553_RS09930;old_locus_tag=CP553_10280
NZ_PCFD01000032.1	Protein Homology	CDS	16340	16762	.	-	0	ID=cds-WP_001830806.1;Parent=gene-CP553_RS09930;Dbxref=GenBank:WP_001830806.1;Name=WP_001830806.1;gbkey=CDS;gene=cymR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458938.1;locus_tag=CP553_RS09930;product=cysteine metabolism transcriptional regulator CymR;protein_id=WP_001830806.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	16848	18119	.	+	.	ID=gene-CP553_RS09935;Name=CP553_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09935;old_locus_tag=CP553_10285
NZ_PCFD01000032.1	Protein Homology	CDS	16848	18119	.	+	0	ID=cds-WP_001830871.1;Parent=gene-CP553_RS09935;Dbxref=GenBank:WP_001830871.1;Name=WP_001830871.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362025.1;locus_tag=CP553_RS09935;product=replication-associated recombination protein A;protein_id=WP_001830871.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	18313	19089	.	-	.	ID=gene-CP553_RS09940;Name=CP553_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09940;old_locus_tag=CP553_10290
NZ_PCFD01000032.1	Protein Homology	CDS	18313	19089	.	-	0	ID=cds-WP_001830777.1;Parent=gene-CP553_RS09940;Dbxref=GenBank:WP_001830777.1;Name=WP_001830777.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493905.1;locus_tag=CP553_RS09940;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_001830777.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	19179	19369	.	-	.	ID=gene-CP553_RS09945;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=CP553_RS09945;old_locus_tag=CP553_10295
NZ_PCFD01000032.1	cmsearch	ncRNA	19179	19369	.	-	.	ID=rna-CP553_RS09945;Parent=gene-CP553_RS09945;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS09945;product=6S RNA
NZ_PCFD01000032.1	cmsearch	exon	19179	19369	.	-	.	ID=exon-CP553_RS09945-1;Parent=rna-CP553_RS09945;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS09945;product=6S RNA
NZ_PCFD01000032.1	RefSeq	gene	19645	21411	.	-	.	ID=gene-CP553_RS09950;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=CP553_RS09950;old_locus_tag=CP553_10305
NZ_PCFD01000032.1	Protein Homology	CDS	19645	21411	.	-	0	ID=cds-WP_002440144.1;Parent=gene-CP553_RS09950;Dbxref=GenBank:WP_002440144.1;Name=WP_002440144.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500245.1;locus_tag=CP553_RS09950;product=aspartate--tRNA ligase;protein_id=WP_002440144.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	21414	22688	.	-	.	ID=gene-CP553_RS09955;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=CP553_RS09955;old_locus_tag=CP553_10310
NZ_PCFD01000032.1	Protein Homology	CDS	21414	22688	.	-	0	ID=cds-WP_001830876.1;Parent=gene-CP553_RS09955;Dbxref=GenBank:WP_001830876.1;Name=WP_001830876.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491142.1;locus_tag=CP553_RS09955;product=histidine--tRNA ligase;protein_id=WP_001830876.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	23060	23935	.	-	.	ID=gene-CP553_RS09960;Name=CP553_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09960;old_locus_tag=CP553_10315
NZ_PCFD01000032.1	Protein Homology	CDS	23060	23935	.	-	0	ID=cds-WP_001830843.1;Parent=gene-CP553_RS09960;Dbxref=GenBank:WP_001830843.1;Name=WP_001830843.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457780.1;locus_tag=CP553_RS09960;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_001830843.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	23932	24384	.	-	.	ID=gene-CP553_RS09965;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=CP553_RS09965;old_locus_tag=CP553_10320
NZ_PCFD01000032.1	Protein Homology	CDS	23932	24384	.	-	0	ID=cds-WP_001830766.1;Parent=gene-CP553_RS09965;Dbxref=GenBank:WP_001830766.1;Name=WP_001830766.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495726.1;locus_tag=CP553_RS09965;product=D-aminoacyl-tRNA deacylase;protein_id=WP_001830766.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	24398	26587	.	-	.	ID=gene-CP553_RS09970;Name=CP553_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09970;old_locus_tag=CP553_10325
NZ_PCFD01000032.1	Protein Homology	CDS	24398	26587	.	-	0	ID=cds-WP_001832683.1;Parent=gene-CP553_RS09970;Dbxref=GenBank:WP_001832683.1;Name=WP_001832683.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500249.1;locus_tag=CP553_RS09970;product=RelA/SpoT family protein;protein_id=WP_001832683.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	27106	27624	.	-	.	ID=gene-CP553_RS09975;Name=CP553_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09975;old_locus_tag=CP553_10335
NZ_PCFD01000032.1	Protein Homology	CDS	27106	27624	.	-	0	ID=cds-WP_001832698.1;Parent=gene-CP553_RS09975;Dbxref=GenBank:WP_001832698.1;Name=WP_001832698.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009559512.1;locus_tag=CP553_RS09975;product=adenine phosphoribosyltransferase;protein_id=WP_001832698.1;transl_table=11
NZ_PCFD01000032.1	RefSeq	gene	27643	29916	.	-	.	ID=gene-CP553_RS09980;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=CP553_RS09980;old_locus_tag=CP553_10340
NZ_PCFD01000032.1	Protein Homology	CDS	27643	29916	.	-	0	ID=cds-WP_002440152.1;Parent=gene-CP553_RS09980;Dbxref=GenBank:WP_002440152.1;Name=WP_002440152.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464636.1;locus_tag=CP553_RS09980;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_002440152.1;transl_table=11
##sequence-region NZ_PCFD01000033.1 1 29536
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000033.1	RefSeq	region	1	29536	.	+	.	ID=NZ_PCFD01000033.1:1..29536;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000033.1	RefSeq	gene	18	434	.	-	.	ID=gene-CP553_RS09985;Name=CP553_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09985;old_locus_tag=CP553_10345
NZ_PCFD01000033.1	Protein Homology	CDS	18	434	.	-	0	ID=cds-WP_002438949.1;Parent=gene-CP553_RS09985;Dbxref=GenBank:WP_002438949.1;Name=WP_002438949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495356.1;locus_tag=CP553_RS09985;product=hypothetical protein;protein_id=WP_002438949.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	1250	1426	.	-	.	ID=gene-CP553_RS09990;Name=CP553_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09990
NZ_PCFD01000033.1	Protein Homology	CDS	1250	1426	.	-	0	ID=cds-WP_002438952.1;Parent=gene-CP553_RS09990;Dbxref=GenBank:WP_002438952.1;Name=WP_002438952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498419.1;locus_tag=CP553_RS09990;product=hypothetical protein;protein_id=WP_002438952.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	1934	2437	.	-	.	ID=gene-CP553_RS09995;Name=CP553_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS09995;old_locus_tag=CP553_10355
NZ_PCFD01000033.1	Protein Homology	CDS	1934	2437	.	-	0	ID=cds-WP_002438954.1;Parent=gene-CP553_RS09995;Dbxref=GenBank:WP_002438954.1;Name=WP_002438954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464628.1;locus_tag=CP553_RS09995;product=YagU family protein;protein_id=WP_002438954.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	2724	3665	.	+	.	ID=gene-CP553_RS10000;Name=CP553_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10000;old_locus_tag=CP553_10360
NZ_PCFD01000033.1	Protein Homology	CDS	2724	3665	.	+	0	ID=cds-WP_001829688.1;Parent=gene-CP553_RS10000;Dbxref=GenBank:WP_001829688.1;Name=WP_001829688.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445993.1;locus_tag=CP553_RS10000;product=cation diffusion facilitator family transporter;protein_id=WP_001829688.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	4063	4137	.	-	.	ID=gene-CP553_RS13035;Name=CP553_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS13035;old_locus_tag=CP553_10365
NZ_PCFD01000033.1	Protein Homology	CDS	4063	4137	.	-	0	ID=cds-WP_095658922.1;Parent=gene-CP553_RS13035;Dbxref=GenBank:WP_095658922.1;Name=WP_095658922.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033428.5;locus_tag=CP553_RS13035;product=epsilon family phenol-soluble modulin;protein_id=WP_095658922.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	5031	5231	.	+	.	ID=gene-CP553_RS10010;Name=CP553_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10010;old_locus_tag=CP553_10370
NZ_PCFD01000033.1	Protein Homology	CDS	5031	5231	.	+	0	ID=cds-WP_001829681.1;Parent=gene-CP553_RS10010;Dbxref=GenBank:WP_001829681.1;Name=WP_001829681.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059082.1;locus_tag=CP553_RS10010;product=cold-shock protein;protein_id=WP_001829681.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	5852	6076	.	-	.	ID=gene-CP553_RS10015;Name=CP553_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10015;old_locus_tag=CP553_10375
NZ_PCFD01000033.1	Protein Homology	CDS	5852	6076	.	-	0	ID=cds-WP_001829613.1;Parent=gene-CP553_RS10015;Dbxref=GenBank:WP_001829613.1;Name=WP_001829613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476472.1;locus_tag=CP553_RS10015;product=hypothetical protein;protein_id=WP_001829613.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	6100	6384	.	-	.	ID=gene-CP553_RS10020;Name=CP553_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10020;old_locus_tag=CP553_10380
NZ_PCFD01000033.1	Protein Homology	CDS	6100	6384	.	-	0	ID=cds-WP_001829635.1;Parent=gene-CP553_RS10020;Dbxref=GenBank:WP_001829635.1;Name=WP_001829635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497154.1;locus_tag=CP553_RS10020;product=hypothetical protein;protein_id=WP_001829635.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	6483	7229	.	-	.	ID=gene-CP553_RS10025;Name=CP553_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10025;old_locus_tag=CP553_10385
NZ_PCFD01000033.1	Protein Homology	CDS	6483	7229	.	-	0	ID=cds-WP_002438959.1;Parent=gene-CP553_RS10025;Dbxref=GenBank:WP_002438959.1;Name=WP_002438959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438959.1;locus_tag=CP553_RS10025;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_002438959.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	7513	7746	.	+	.	ID=gene-CP553_RS10030;Name=CP553_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10030;old_locus_tag=CP553_10390
NZ_PCFD01000033.1	Protein Homology	CDS	7513	7746	.	+	0	ID=cds-WP_001829664.1;Parent=gene-CP553_RS10030;Dbxref=GenBank:WP_001829664.1;Name=WP_001829664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497152.1;locus_tag=CP553_RS10030;product=hypothetical protein;protein_id=WP_001829664.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	7806	8360	.	-	.	ID=gene-CP553_RS10035;Name=lnsA;gbkey=Gene;gene=lnsA;gene_biotype=protein_coding;locus_tag=CP553_RS10035;old_locus_tag=CP553_10395
NZ_PCFD01000033.1	Protein Homology	CDS	7806	8360	.	-	0	ID=cds-WP_001829566.1;Parent=gene-CP553_RS10035;Dbxref=GenBank:WP_001829566.1;Name=WP_001829566.1;gbkey=CDS;gene=lnsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474279.1;locus_tag=CP553_RS10035;product=lipoprotein N-acylation protein LnsA;protein_id=WP_001829566.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	8550	8738	.	-	.	ID=gene-CP553_RS10040;Name=tsaT;gbkey=Gene;gene=tsaT;gene_biotype=protein_coding;locus_tag=CP553_RS10040;old_locus_tag=CP553_10400
NZ_PCFD01000033.1	Protein Homology	CDS	8550	8738	.	-	0	ID=cds-WP_001829569.1;Parent=gene-CP553_RS10040;Dbxref=GenBank:WP_001829569.1;Name=WP_001829569.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;gene=tsaT;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445998.1;locus_tag=CP553_RS10040;product=type II toxin-antitoxin system toxin TsaT;protein_id=WP_001829569.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	8763	9020	.	-	.	ID=gene-CP553_RS12835;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=CP553_RS12835;old_locus_tag=CP553_10405
NZ_PCFD01000033.1	Protein Homology	CDS	8763	9020	.	-	0	ID=cds-WP_002438963.1;Parent=gene-CP553_RS12835;Dbxref=GenBank:WP_002438963.1;Name=WP_002438963.1;Ontology_term=GO:0110001;gbkey=CDS;gene=tsaA;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438963.1;locus_tag=CP553_RS12835;product=type II toxin-antitoxin system antitoxin TsaA;protein_id=WP_002438963.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	9429	9632	.	+	.	ID=gene-CP553_RS10045;Name=CP553_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10045;old_locus_tag=CP553_10410
NZ_PCFD01000033.1	Protein Homology	CDS	9429	9632	.	+	0	ID=cds-WP_002438966.1;Parent=gene-CP553_RS10045;Dbxref=GenBank:WP_002438966.1;Name=WP_002438966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474247.1;locus_tag=CP553_RS10045;product=sterile alpha motif-like domain-containing protein;protein_id=WP_002438966.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	9624	9860	.	-	.	ID=gene-CP553_RS10050;Name=CP553_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10050;old_locus_tag=CP553_10415
NZ_PCFD01000033.1	Protein Homology	CDS	9624	9860	.	-	0	ID=cds-WP_002457224.1;Parent=gene-CP553_RS10050;Dbxref=GenBank:WP_002457224.1;Name=WP_002457224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491230.1;locus_tag=CP553_RS10050;product=hypothetical protein;protein_id=WP_002457224.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	10074	10661	.	+	.	ID=gene-CP553_RS10055;Name=CP553_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10055;old_locus_tag=CP553_10420
NZ_PCFD01000033.1	Protein Homology	CDS	10074	10661	.	+	0	ID=cds-WP_001829615.1;Parent=gene-CP553_RS10055;Dbxref=GenBank:WP_001829615.1;Name=WP_001829615.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486338.1;locus_tag=CP553_RS10055;product=histidine phosphatase family protein;protein_id=WP_001829615.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	10932	11432	.	-	.	ID=gene-CP553_RS10060;Name=CP553_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10060;old_locus_tag=CP553_10425
NZ_PCFD01000033.1	Protein Homology	CDS	10932	11432	.	-	0	ID=cds-WP_001829623.1;Parent=gene-CP553_RS10060;Dbxref=GenBank:WP_001829623.1;Name=WP_001829623.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469328.1;locus_tag=CP553_RS10060;product=GNAT family N-acetyltransferase;protein_id=WP_001829623.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	pseudogene	11819	12006	.	+	.	ID=gene-CP553_RS12840;Name=CP553_RS12840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12840;old_locus_tag=CP553_10435;pseudo=true
NZ_PCFD01000033.1	Protein Homology	CDS	11819	12006	.	+	0	ID=cds-CP553_RS12840;Parent=gene-CP553_RS12840;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456764.1;locus_tag=CP553_RS12840;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	12018	12173	.	+	.	ID=gene-CP553_RS10065;Name=CP553_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10065
NZ_PCFD01000033.1	GeneMarkS-2+	CDS	12018	12173	.	+	0	ID=cds-WP_001829648.1;Parent=gene-CP553_RS10065;Dbxref=GenBank:WP_001829648.1;Name=WP_001829648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS10065;product=hypothetical protein;protein_id=WP_001829648.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	12357	12779	.	-	.	ID=gene-CP553_RS10070;Name=CP553_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10070;old_locus_tag=CP553_10440
NZ_PCFD01000033.1	Protein Homology	CDS	12357	12779	.	-	0	ID=cds-WP_002457221.1;Parent=gene-CP553_RS10070;Dbxref=GenBank:WP_002457221.1;Name=WP_002457221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499385.1;locus_tag=CP553_RS10070;product=organic hydroperoxide resistance protein;protein_id=WP_002457221.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	12940	13656	.	+	.	ID=gene-CP553_RS10075;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=CP553_RS10075;old_locus_tag=CP553_10445
NZ_PCFD01000033.1	Protein Homology	CDS	12940	13656	.	+	0	ID=cds-WP_001831974.1;Parent=gene-CP553_RS10075;Dbxref=GenBank:WP_001831974.1;Name=WP_001831974.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493469.1;locus_tag=CP553_RS10075;product=type I 3-dehydroquinate dehydratase;protein_id=WP_001831974.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	13737	14279	.	+	.	ID=gene-CP553_RS10080;Name=CP553_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10080;old_locus_tag=CP553_10450
NZ_PCFD01000033.1	Protein Homology	CDS	13737	14279	.	+	0	ID=cds-WP_001831981.1;Parent=gene-CP553_RS10080;Dbxref=GenBank:WP_001831981.1;Name=WP_001831981.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446007.1;locus_tag=CP553_RS10080;product=nitroreductase family protein;protein_id=WP_001831981.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	14462	14785	.	-	.	ID=gene-CP553_RS10085;Name=CP553_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10085;old_locus_tag=CP553_10455
NZ_PCFD01000033.1	Protein Homology	CDS	14462	14785	.	-	0	ID=cds-WP_001831907.1;Parent=gene-CP553_RS10085;Dbxref=GenBank:WP_001831907.1;Name=WP_001831907.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831907.1;locus_tag=CP553_RS10085;product=thioredoxin family protein;protein_id=WP_001831907.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	14928	15281	.	+	.	ID=gene-CP553_RS10090;Name=CP553_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10090;old_locus_tag=CP553_10460
NZ_PCFD01000033.1	Protein Homology	CDS	14928	15281	.	+	0	ID=cds-WP_001831965.1;Parent=gene-CP553_RS10090;Dbxref=GenBank:WP_001831965.1;Name=WP_001831965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446009.1;locus_tag=CP553_RS10090;product=arsenate reductase family protein;protein_id=WP_001831965.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	15455	15835	.	+	.	ID=gene-CP553_RS10095;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=CP553_RS10095;old_locus_tag=CP553_10465
NZ_PCFD01000033.1	Protein Homology	CDS	15455	15835	.	+	0	ID=cds-WP_002438979.1;Parent=gene-CP553_RS10095;Dbxref=GenBank:WP_002438979.1;Name=WP_002438979.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831963.1;locus_tag=CP553_RS10095;product=glycine cleavage system protein GcvH;protein_id=WP_002438979.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	16095	16481	.	+	.	ID=gene-CP553_RS10100;Name=CP553_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10100;old_locus_tag=CP553_10475
NZ_PCFD01000033.1	Protein Homology	CDS	16095	16481	.	+	0	ID=cds-WP_001831968.1;Parent=gene-CP553_RS10100;Dbxref=GenBank:WP_001831968.1;Name=WP_001831968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499394.1;locus_tag=CP553_RS10100;product=toprim domain-containing protein;protein_id=WP_001831968.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	16474	16770	.	+	.	ID=gene-CP553_RS10105;Name=CP553_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10105;old_locus_tag=CP553_10480
NZ_PCFD01000033.1	Protein Homology	CDS	16474	16770	.	+	0	ID=cds-WP_001831936.1;Parent=gene-CP553_RS10105;Dbxref=GenBank:WP_001831936.1;Name=WP_001831936.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446011.1;locus_tag=CP553_RS10105;product=thioredoxin family protein;protein_id=WP_001831936.1;transl_table=11
NZ_PCFD01000033.1	cmsearch	riboswitch	16827	16929	.	+	.	ID=id-NZ_PCFD01000033.1:16827..16929;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000033.1	RefSeq	gene	17023	18048	.	+	.	ID=gene-CP553_RS10110;Name=CP553_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10110;old_locus_tag=CP553_10485
NZ_PCFD01000033.1	Protein Homology	CDS	17023	18048	.	+	0	ID=cds-WP_002456122.1;Parent=gene-CP553_RS10110;Dbxref=GenBank:WP_002456122.1;Name=WP_002456122.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276311.1;locus_tag=CP553_RS10110;product=methionine ABC transporter ATP-binding protein;protein_id=WP_002456122.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	18041	18736	.	+	.	ID=gene-CP553_RS10115;Name=CP553_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10115;old_locus_tag=CP553_10490
NZ_PCFD01000033.1	Protein Homology	CDS	18041	18736	.	+	0	ID=cds-WP_002438988.1;Parent=gene-CP553_RS10115;Dbxref=GenBank:WP_002438988.1;Name=WP_002438988.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499397.1;locus_tag=CP553_RS10115;product=methionine ABC transporter permease;protein_id=WP_002438988.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	18757	19569	.	+	.	ID=gene-CP553_RS10120;Name=CP553_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10120;old_locus_tag=CP553_10495
NZ_PCFD01000033.1	Protein Homology	CDS	18757	19569	.	+	0	ID=cds-WP_002438990.1;Parent=gene-CP553_RS10120;Dbxref=GenBank:WP_002438990.1;Name=WP_002438990.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499398.1;locus_tag=CP553_RS10120;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_002438990.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	19839	19997	.	-	.	ID=gene-CP553_RS10125;Name=CP553_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10125;old_locus_tag=CP553_10500
NZ_PCFD01000033.1	Protein Homology	CDS	19839	19997	.	-	0	ID=cds-WP_001831893.1;Parent=gene-CP553_RS10125;Dbxref=GenBank:WP_001831893.1;Name=WP_001831893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470501.1;locus_tag=CP553_RS10125;product=hypothetical protein;protein_id=WP_001831893.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	20172	20363	.	+	.	ID=gene-CP553_RS10130;Name=CP553_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10130;old_locus_tag=CP553_10505
NZ_PCFD01000033.1	Protein Homology	CDS	20172	20363	.	+	0	ID=cds-WP_001831967.1;Parent=gene-CP553_RS10130;Dbxref=GenBank:WP_001831967.1;Name=WP_001831967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831967.1;locus_tag=CP553_RS10130;product=CsbD family protein;protein_id=WP_001831967.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	20429	21289	.	-	.	ID=gene-CP553_RS10135;Name=CP553_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10135;old_locus_tag=CP553_10510
NZ_PCFD01000033.1	Protein Homology	CDS	20429	21289	.	-	0	ID=cds-WP_001831939.1;Parent=gene-CP553_RS10135;Dbxref=GenBank:WP_001831939.1;Name=WP_001831939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446015.1;locus_tag=CP553_RS10135;product=DUF368 domain-containing protein;protein_id=WP_001831939.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	21611	22372	.	+	.	ID=gene-CP553_RS10140;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=CP553_RS10140;old_locus_tag=CP553_10515
NZ_PCFD01000033.1	Protein Homology	CDS	21611	22372	.	+	0	ID=cds-WP_001831944.1;Parent=gene-CP553_RS10140;Dbxref=GenBank:WP_001831944.1;Name=WP_001831944.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499401.1;locus_tag=CP553_RS10140;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_001831944.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	22467	23774	.	+	.	ID=gene-CP553_RS10145;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=CP553_RS10145;old_locus_tag=CP553_10520
NZ_PCFD01000033.1	Protein Homology	CDS	22467	23774	.	+	0	ID=cds-WP_002438995.1;Parent=gene-CP553_RS10145;Dbxref=GenBank:WP_002438995.1;Name=WP_002438995.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499402.1;locus_tag=CP553_RS10145;product=Fe-S cluster assembly protein SufD;protein_id=WP_002438995.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	23842	25083	.	+	.	ID=gene-CP553_RS10150;Name=CP553_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10150;old_locus_tag=CP553_10525
NZ_PCFD01000033.1	Protein Homology	CDS	23842	25083	.	+	0	ID=cds-WP_002438997.1;Parent=gene-CP553_RS10150;Dbxref=GenBank:WP_002438997.1;Name=WP_002438997.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020359689.1;locus_tag=CP553_RS10150;product=cysteine desulfurase;protein_id=WP_002438997.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	25073	25537	.	+	.	ID=gene-CP553_RS10155;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=CP553_RS10155;old_locus_tag=CP553_10530
NZ_PCFD01000033.1	Protein Homology	CDS	25073	25537	.	+	0	ID=cds-WP_001831954.1;Parent=gene-CP553_RS10155;Dbxref=GenBank:WP_001831954.1;Name=WP_001831954.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499404.1;locus_tag=CP553_RS10155;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_001831954.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	25743	27140	.	+	.	ID=gene-CP553_RS10160;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=CP553_RS10160;old_locus_tag=CP553_10535
NZ_PCFD01000033.1	Protein Homology	CDS	25743	27140	.	+	0	ID=cds-WP_001831980.1;Parent=gene-CP553_RS10160;Dbxref=GenBank:WP_001831980.1;Name=WP_001831980.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469760.1;locus_tag=CP553_RS10160;product=Fe-S cluster assembly protein SufB;protein_id=WP_001831980.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	27470	27616	.	+	.	ID=gene-CP553_RS10165;Name=CP553_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10165
NZ_PCFD01000033.1	Protein Homology	CDS	27470	27616	.	+	0	ID=cds-WP_001831994.1;Parent=gene-CP553_RS10165;Dbxref=GenBank:WP_001831994.1;Name=WP_001831994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831994.1;locus_tag=CP553_RS10165;product=hypothetical protein;protein_id=WP_001831994.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	pseudogene	27607	27960	.	+	.	ID=gene-CP553_RS13010;Name=CP553_RS13010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS13010;pseudo=true
NZ_PCFD01000033.1	Protein Homology	CDS	27607	27960	.	+	0	ID=cds-CP553_RS13010;Parent=gene-CP553_RS13010;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834554.1;locus_tag=CP553_RS13010;product=hypothetical protein;pseudo=true;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	28299	28505	.	+	.	ID=gene-CP553_RS10175;Name=CP553_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10175;old_locus_tag=CP553_10545
NZ_PCFD01000033.1	Protein Homology	CDS	28299	28505	.	+	0	ID=cds-WP_002439005.1;Parent=gene-CP553_RS10175;Dbxref=GenBank:WP_002439005.1;Name=WP_002439005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439005.1;locus_tag=CP553_RS10175;product=hypothetical protein;protein_id=WP_002439005.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	28602	28961	.	+	.	ID=gene-CP553_RS10180;Name=CP553_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10180;old_locus_tag=CP553_10550
NZ_PCFD01000033.1	Protein Homology	CDS	28602	28961	.	+	0	ID=cds-WP_002439007.1;Parent=gene-CP553_RS10180;Dbxref=GenBank:WP_002439007.1;Name=WP_002439007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490436.1;locus_tag=CP553_RS10180;product=DUF4467 domain-containing protein;protein_id=WP_002439007.1;transl_table=11
NZ_PCFD01000033.1	RefSeq	gene	28975	29385	.	+	.	ID=gene-CP553_RS10185;Name=CP553_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10185;old_locus_tag=CP553_10555
NZ_PCFD01000033.1	Protein Homology	CDS	28975	29385	.	+	0	ID=cds-WP_002456120.1;Parent=gene-CP553_RS10185;Dbxref=GenBank:WP_002456120.1;Name=WP_002456120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456120.1;locus_tag=CP553_RS10185;product=DUF4064 domain-containing protein;protein_id=WP_002456120.1;transl_table=11
##sequence-region NZ_PCFD01000034.1 1 27863
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000034.1	RefSeq	region	1	27863	.	+	.	ID=NZ_PCFD01000034.1:1..27863;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000034.1	RefSeq	gene	1	270	.	+	.	ID=gene-CP553_RS10190;Name=CP553_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10190;old_locus_tag=CP553_10560;partial=true;start_range=.,1
NZ_PCFD01000034.1	Protein Homology	CDS	1	270	.	+	0	ID=cds-WP_133230768.1;Parent=gene-CP553_RS10190;Dbxref=GenBank:WP_133230768.1;Name=WP_133230768.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476739.1;locus_tag=CP553_RS10190;partial=true;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_133230768.1;start_range=.,1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	276	686	.	+	.	ID=gene-CP553_RS10195;Name=CP553_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10195;old_locus_tag=CP553_10565
NZ_PCFD01000034.1	Protein Homology	CDS	276	686	.	+	0	ID=cds-WP_002439702.1;Parent=gene-CP553_RS10195;Dbxref=GenBank:WP_002439702.1;Name=WP_002439702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500961.1;locus_tag=CP553_RS10195;product=Msa family membrane protein;protein_id=WP_002439702.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	673	1536	.	+	.	ID=gene-CP553_RS10200;Name=CP553_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10200;old_locus_tag=CP553_10570
NZ_PCFD01000034.1	Protein Homology	CDS	673	1536	.	+	0	ID=cds-WP_002439701.1;Parent=gene-CP553_RS10200;Dbxref=GenBank:WP_002439701.1;Name=WP_002439701.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495030.1;locus_tag=CP553_RS10200;product=ABC transporter ATP-binding protein;protein_id=WP_002439701.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	1545	2294	.	+	.	ID=gene-CP553_RS10205;Name=CP553_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10205;old_locus_tag=CP553_10575
NZ_PCFD01000034.1	Protein Homology	CDS	1545	2294	.	+	0	ID=cds-WP_002439699.1;Parent=gene-CP553_RS10205;Dbxref=GenBank:WP_002439699.1;Name=WP_002439699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831136.1;locus_tag=CP553_RS10205;product=ABC transporter permease;protein_id=WP_002439699.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	2426	3691	.	-	.	ID=gene-CP553_RS10210;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=CP553_RS10210;old_locus_tag=CP553_10580
NZ_PCFD01000034.1	Protein Homology	CDS	2426	3691	.	-	0	ID=cds-WP_002439697.1;Parent=gene-CP553_RS10210;Dbxref=GenBank:WP_002439697.1;Name=WP_002439697.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499928.1;locus_tag=CP553_RS10210;product=diaminopimelate decarboxylase;protein_id=WP_002439697.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	3692	4765	.	-	.	ID=gene-CP553_RS10215;Name=CP553_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10215;old_locus_tag=CP553_10585
NZ_PCFD01000034.1	Protein Homology	CDS	3692	4765	.	-	0	ID=cds-WP_002439696.1;Parent=gene-CP553_RS10215;Dbxref=GenBank:WP_002439696.1;Name=WP_002439696.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784,GO:0030170;gbkey=CDS;go_function=alanine racemase activity|0008784||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476735.1;locus_tag=CP553_RS10215;product=alanine racemase;protein_id=WP_002439696.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	4771	5922	.	-	.	ID=gene-CP553_RS10220;Name=CP553_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10220;old_locus_tag=CP553_10590
NZ_PCFD01000034.1	Protein Homology	CDS	4771	5922	.	-	0	ID=cds-WP_001832789.1;Parent=gene-CP553_RS10220;Dbxref=GenBank:WP_001832789.1;Name=WP_001832789.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499926.1;locus_tag=CP553_RS10220;product=amidohydrolase;protein_id=WP_001832789.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	6080	6802	.	-	.	ID=gene-CP553_RS10225;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=CP553_RS10225;old_locus_tag=CP553_10595
NZ_PCFD01000034.1	Protein Homology	CDS	6080	6802	.	-	0	ID=cds-WP_001830955.1;Parent=gene-CP553_RS10225;Dbxref=GenBank:WP_001830955.1;Name=WP_001830955.1;Ontology_term=GO:0009089,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830955.1;locus_tag=CP553_RS10225;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=WP_001830955.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	6824	7546	.	-	.	ID=gene-CP553_RS10230;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=CP553_RS10230;old_locus_tag=CP553_10600
NZ_PCFD01000034.1	Protein Homology	CDS	6824	7546	.	-	0	ID=cds-WP_001830951.1;Parent=gene-CP553_RS10230;Dbxref=GenBank:WP_001830951.1;Name=WP_001830951.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830951.1;locus_tag=CP553_RS10230;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_001830951.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	7546	8430	.	-	.	ID=gene-CP553_RS10235;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=CP553_RS10235;old_locus_tag=CP553_10605
NZ_PCFD01000034.1	Protein Homology	CDS	7546	8430	.	-	0	ID=cds-WP_002439691.1;Parent=gene-CP553_RS10235;Dbxref=GenBank:WP_002439691.1;Name=WP_002439691.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503318.1;locus_tag=CP553_RS10235;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002439691.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	8432	9421	.	-	.	ID=gene-CP553_RS10240;Name=CP553_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10240;old_locus_tag=CP553_10610
NZ_PCFD01000034.1	Protein Homology	CDS	8432	9421	.	-	0	ID=cds-WP_002439689.1;Parent=gene-CP553_RS10240;Dbxref=GenBank:WP_002439689.1;Name=WP_002439689.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831123.1;locus_tag=CP553_RS10240;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002439689.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	9492	10724	.	-	.	ID=gene-CP553_RS10245;Name=CP553_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10245;old_locus_tag=CP553_10615
NZ_PCFD01000034.1	Protein Homology	CDS	9492	10724	.	-	0	ID=cds-WP_002439688.1;Parent=gene-CP553_RS10245;Dbxref=GenBank:WP_002439688.1;Name=WP_002439688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303136.1;locus_tag=CP553_RS10245;product=aspartate kinase;protein_id=WP_002439688.1;transl_table=11
NZ_PCFD01000034.1	cmsearch	riboswitch	10778	10957	.	-	.	ID=id-NZ_PCFD01000034.1:10778..10957;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000034.1	RefSeq	gene	11301	12908	.	-	.	ID=gene-CP553_RS10250;Name=CP553_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10250;old_locus_tag=CP553_10620
NZ_PCFD01000034.1	Protein Homology	CDS	11301	12908	.	-	0	ID=cds-WP_001830940.1;Parent=gene-CP553_RS10250;Dbxref=GenBank:WP_001830940.1;Name=WP_001830940.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493635.1;locus_tag=CP553_RS10250;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_001830940.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	13123	14019	.	+	.	ID=gene-CP553_RS10255;Name=cvfB;gbkey=Gene;gene=cvfB;gene_biotype=protein_coding;locus_tag=CP553_RS10255;old_locus_tag=CP553_10625
NZ_PCFD01000034.1	Protein Homology	CDS	13123	14019	.	+	0	ID=cds-WP_002439685.1;Parent=gene-CP553_RS10255;Dbxref=GenBank:WP_002439685.1;Name=WP_002439685.1;gbkey=CDS;gene=cvfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470638.1;locus_tag=CP553_RS10255;product=RNA-binding virulence regulatory protein CvfB;protein_id=WP_002439685.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	14623	15600	.	+	.	ID=gene-CP553_RS10260;Name=CP553_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10260;old_locus_tag=CP553_10630
NZ_PCFD01000034.1	Protein Homology	CDS	14623	15600	.	+	0	ID=cds-WP_001831206.1;Parent=gene-CP553_RS10260;Dbxref=GenBank:WP_001831206.1;Name=WP_001831206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505198.1;locus_tag=CP553_RS10260;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_001831206.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	15808	16734	.	+	.	ID=gene-CP553_RS10265;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=CP553_RS10265;old_locus_tag=CP553_10635
NZ_PCFD01000034.1	Protein Homology	CDS	15808	16734	.	+	0	ID=cds-WP_001830936.1;Parent=gene-CP553_RS10265;Dbxref=GenBank:WP_001830936.1;Name=WP_001830936.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453209.1;locus_tag=CP553_RS10265;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_001830936.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	16736	17641	.	+	.	ID=gene-CP553_RS10270;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=CP553_RS10270;old_locus_tag=CP553_10640
NZ_PCFD01000034.1	Protein Homology	CDS	16736	17641	.	+	0	ID=cds-WP_001831209.1;Parent=gene-CP553_RS10270;Dbxref=GenBank:WP_001831209.1;Name=WP_001831209.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831209.1;locus_tag=CP553_RS10270;product=phosphate ABC transporter permease PstA;protein_id=WP_001831209.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	17734	18609	.	+	.	ID=gene-CP553_RS10275;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=CP553_RS10275;old_locus_tag=CP553_10645
NZ_PCFD01000034.1	Protein Homology	CDS	17734	18609	.	+	0	ID=cds-WP_001831097.1;Parent=gene-CP553_RS10275;Dbxref=GenBank:WP_001831097.1;Name=WP_001831097.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831097.1;locus_tag=CP553_RS10275;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_001831097.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	18616	19263	.	+	.	ID=gene-CP553_RS10280;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=CP553_RS10280;old_locus_tag=CP553_10650
NZ_PCFD01000034.1	Protein Homology	CDS	18616	19263	.	+	0	ID=cds-WP_001830968.1;Parent=gene-CP553_RS10280;Dbxref=GenBank:WP_001830968.1;Name=WP_001830968.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830968.1;locus_tag=CP553_RS10280;product=phosphate signaling complex protein PhoU;protein_id=WP_001830968.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	19357	21168	.	-	.	ID=gene-CP553_RS10285;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=CP553_RS10285;old_locus_tag=CP553_10655
NZ_PCFD01000034.1	Protein Homology	CDS	19357	21168	.	-	0	ID=cds-WP_002439680.1;Parent=gene-CP553_RS10285;Dbxref=GenBank:WP_002439680.1;Name=WP_002439680.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505490.1;locus_tag=CP553_RS10285;product=oligoendopeptidase F;protein_id=WP_002439680.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	21416	21754	.	+	.	ID=gene-CP553_RS10290;Name=CP553_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10290;old_locus_tag=CP553_10660
NZ_PCFD01000034.1	Protein Homology	CDS	21416	21754	.	+	0	ID=cds-WP_002439678.1;Parent=gene-CP553_RS10290;Dbxref=GenBank:WP_002439678.1;Name=WP_002439678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476725.1;locus_tag=CP553_RS10290;product=membrane protein;protein_id=WP_002439678.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	21933	22934	.	+	.	ID=gene-CP553_RS10295;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=CP553_RS10295;old_locus_tag=CP553_10665
NZ_PCFD01000034.1	Protein Homology	CDS	21933	22934	.	+	0	ID=cds-WP_002439676.1;Parent=gene-CP553_RS10295;Dbxref=GenBank:WP_002439676.1;Name=WP_002439676.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502410.1;locus_tag=CP553_RS10295;product=nickel ABC transporter permease;protein_id=WP_002439676.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	22924	23778	.	+	.	ID=gene-CP553_RS10300;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=CP553_RS10300;old_locus_tag=CP553_10670
NZ_PCFD01000034.1	Protein Homology	CDS	22924	23778	.	+	0	ID=cds-WP_002439674.1;Parent=gene-CP553_RS10300;Dbxref=GenBank:WP_002439674.1;Name=WP_002439674.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493642.1;locus_tag=CP553_RS10300;product=nickel transporter permease;protein_id=WP_002439674.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	23741	24517	.	+	.	ID=gene-CP553_RS10305;Name=CP553_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10305;old_locus_tag=CP553_10675
NZ_PCFD01000034.1	Protein Homology	CDS	23741	24517	.	+	0	ID=cds-WP_002439673.1;Parent=gene-CP553_RS10305;Dbxref=GenBank:WP_002439673.1;Name=WP_002439673.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831134.1;locus_tag=CP553_RS10305;product=ATP-binding cassette domain-containing protein;protein_id=WP_002439673.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	24520	25218	.	+	.	ID=gene-CP553_RS10310;Name=CP553_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10310;old_locus_tag=CP553_10680
NZ_PCFD01000034.1	Protein Homology	CDS	24520	25218	.	+	0	ID=cds-WP_002439671.1;Parent=gene-CP553_RS10310;Dbxref=GenBank:WP_002439671.1;Name=WP_002439671.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505752.1;locus_tag=CP553_RS10310;product=ABC transporter ATP-binding protein;protein_id=WP_002439671.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	25352	26362	.	-	.	ID=gene-CP553_RS10315;Name=CP553_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10315;old_locus_tag=CP553_10685
NZ_PCFD01000034.1	Protein Homology	CDS	25352	26362	.	-	0	ID=cds-WP_002439669.1;Parent=gene-CP553_RS10315;Dbxref=GenBank:WP_002439669.1;Name=WP_002439669.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502412.1;locus_tag=CP553_RS10315;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_002439669.1;transl_table=11
NZ_PCFD01000034.1	RefSeq	gene	26427	27191	.	-	.	ID=gene-CP553_RS10320;Name=CP553_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10320;old_locus_tag=CP553_10690
NZ_PCFD01000034.1	Protein Homology	CDS	26427	27191	.	-	0	ID=cds-WP_002439667.1;Parent=gene-CP553_RS10320;Dbxref=GenBank:WP_002439667.1;Name=WP_002439667.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361149.1;locus_tag=CP553_RS10320;product=HAD-IIB family hydrolase;protein_id=WP_002439667.1;transl_table=11
##sequence-region NZ_PCFD01000035.1 1 26280
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000035.1	RefSeq	region	1	26280	.	+	.	ID=NZ_PCFD01000035.1:1..26280;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000035.1	RefSeq	gene	1	158	.	+	.	ID=gene-CP553_RS10325;Name=CP553_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10325;old_locus_tag=CP553_10695;partial=true;start_range=.,1
NZ_PCFD01000035.1	Protein Homology	CDS	1	158	.	+	2	ID=cds-WP_133230772.1;Parent=gene-CP553_RS10325;Dbxref=GenBank:WP_133230772.1;Name=WP_133230772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501337.1;locus_tag=CP553_RS10325;partial=true;product=CHAP domain-containing protein;protein_id=WP_133230772.1;start_range=.,1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	607	2004	.	-	.	ID=gene-CP553_RS10330;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=CP553_RS10330;old_locus_tag=CP553_10700
NZ_PCFD01000035.1	Protein Homology	CDS	607	2004	.	-	0	ID=cds-WP_001832636.1;Parent=gene-CP553_RS10330;Dbxref=GenBank:WP_001832636.1;Name=WP_001832636.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832636.1;locus_tag=CP553_RS10330;product=Na+/H+ antiporter NhaC;protein_id=WP_001832636.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	2069	3139	.	-	.	ID=gene-CP553_RS10335;Name=CP553_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10335;old_locus_tag=CP553_10705
NZ_PCFD01000035.1	Protein Homology	CDS	2069	3139	.	-	0	ID=cds-WP_001830031.1;Parent=gene-CP553_RS10335;Dbxref=GenBank:WP_001830031.1;Name=WP_001830031.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830031.1;locus_tag=CP553_RS10335;product=NAD/NADP-dependent octopine/nopaline dehydrogenase family protein;protein_id=WP_001830031.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	3521	4015	.	+	.	ID=gene-CP553_RS10340;Name=CP553_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10340;old_locus_tag=CP553_10710
NZ_PCFD01000035.1	Protein Homology	CDS	3521	4015	.	+	0	ID=cds-WP_001830040.1;Parent=gene-CP553_RS10340;Dbxref=GenBank:WP_001830040.1;Name=WP_001830040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012087248.1;locus_tag=CP553_RS10340;product=DUF4870 domain-containing protein;protein_id=WP_001830040.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	4337	4810	.	+	.	ID=gene-CP553_RS10345;Name=CP553_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10345;old_locus_tag=CP553_10715
NZ_PCFD01000035.1	Protein Homology	CDS	4337	4810	.	+	0	ID=cds-WP_001830036.1;Parent=gene-CP553_RS10345;Dbxref=GenBank:WP_001830036.1;Name=WP_001830036.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496352.1;locus_tag=CP553_RS10345;product=CHAP domain-containing protein;protein_id=WP_001830036.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	4963	5289	.	+	.	ID=gene-CP553_RS10350;Name=CP553_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10350;old_locus_tag=CP553_10720
NZ_PCFD01000035.1	Protein Homology	CDS	4963	5289	.	+	0	ID=cds-WP_002438471.1;Parent=gene-CP553_RS10350;Dbxref=GenBank:WP_002438471.1;Name=WP_002438471.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493530.1;locus_tag=CP553_RS10350;product=DMT family transporter;protein_id=WP_002438471.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	5295	5612	.	+	.	ID=gene-CP553_RS10355;Name=CP553_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10355;old_locus_tag=CP553_10725
NZ_PCFD01000035.1	Protein Homology	CDS	5295	5612	.	+	0	ID=cds-WP_001830046.1;Parent=gene-CP553_RS10355;Dbxref=GenBank:WP_001830046.1;Name=WP_001830046.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362966.1;locus_tag=CP553_RS10355;product=DMT family transporter;protein_id=WP_001830046.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	5690	6643	.	+	.	ID=gene-CP553_RS10360;Name=CP553_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10360;old_locus_tag=CP553_10730
NZ_PCFD01000035.1	Protein Homology	CDS	5690	6643	.	+	0	ID=cds-WP_001832639.1;Parent=gene-CP553_RS10360;Dbxref=GenBank:WP_001832639.1;Name=WP_001832639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501039.1;locus_tag=CP553_RS10360;product=2-hydroxyacid dehydrogenase family protein;protein_id=WP_001832639.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	6784	7908	.	-	.	ID=gene-CP553_RS10365;Name=CP553_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10365;old_locus_tag=CP553_10735
NZ_PCFD01000035.1	Protein Homology	CDS	6784	7908	.	-	0	ID=cds-WP_002438467.1;Parent=gene-CP553_RS10365;Dbxref=GenBank:WP_002438467.1;Name=WP_002438467.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362965.1;locus_tag=CP553_RS10365;product=FAD-dependent monooxygenase;protein_id=WP_002438467.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	8291	9067	.	-	.	ID=gene-CP553_RS10370;Name=CP553_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10370;old_locus_tag=CP553_10740
NZ_PCFD01000035.1	Protein Homology	CDS	8291	9067	.	-	0	ID=cds-WP_001832638.1;Parent=gene-CP553_RS10370;Dbxref=GenBank:WP_001832638.1;Name=WP_001832638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457979.1;locus_tag=CP553_RS10370;product=N-acetylglucosaminidase;protein_id=WP_001832638.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	9089	9364	.	-	.	ID=gene-CP553_RS10375;Name=CP553_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10375;old_locus_tag=CP553_10745
NZ_PCFD01000035.1	Protein Homology	CDS	9089	9364	.	-	0	ID=cds-WP_001830049.1;Parent=gene-CP553_RS10375;Dbxref=GenBank:WP_001830049.1;Name=WP_001830049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496354.1;locus_tag=CP553_RS10375;product=hypothetical protein;protein_id=WP_001830049.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	9998	10948	.	-	.	ID=gene-CP553_RS10380;Name=CP553_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10380;old_locus_tag=CP553_10755
NZ_PCFD01000035.1	Protein Homology	CDS	9998	10948	.	-	0	ID=cds-WP_001830043.1;Parent=gene-CP553_RS10380;Dbxref=GenBank:WP_001830043.1;Name=WP_001830043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832630.1;locus_tag=CP553_RS10380;product=LCP family glycopolymer transferase;protein_id=WP_001830043.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	11137	11952	.	-	.	ID=gene-CP553_RS10385;Name=CP553_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10385;old_locus_tag=CP553_10760
NZ_PCFD01000035.1	Protein Homology	CDS	11137	11952	.	-	0	ID=cds-WP_002438460.1;Parent=gene-CP553_RS10385;Dbxref=GenBank:WP_002438460.1;Name=WP_002438460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477135.1;locus_tag=CP553_RS10385;product=inositol monophosphatase family protein;protein_id=WP_002438460.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	12380	13069	.	+	.	ID=gene-CP553_RS10390;Name=CP553_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10390;old_locus_tag=CP553_10765
NZ_PCFD01000035.1	Protein Homology	CDS	12380	13069	.	+	0	ID=cds-WP_001830039.1;Parent=gene-CP553_RS10390;Dbxref=GenBank:WP_001830039.1;Name=WP_001830039.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490791.1;locus_tag=CP553_RS10390;product=helix-turn-helix transcriptional regulator;protein_id=WP_001830039.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	13248	13994	.	-	.	ID=gene-CP553_RS10395;Name=CP553_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10395;old_locus_tag=CP553_10770
NZ_PCFD01000035.1	Protein Homology	CDS	13248	13994	.	-	0	ID=cds-WP_116843013.1;Parent=gene-CP553_RS10395;Dbxref=GenBank:WP_116843013.1;Name=WP_116843013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366626.1;locus_tag=CP553_RS10395;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_116843013.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	14046	14381	.	+	.	ID=gene-CP553_RS10400;Name=CP553_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10400;old_locus_tag=CP553_10775
NZ_PCFD01000035.1	Protein Homology	CDS	14046	14381	.	+	0	ID=cds-WP_002456083.1;Parent=gene-CP553_RS10400;Dbxref=GenBank:WP_002456083.1;Name=WP_002456083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456083.1;locus_tag=CP553_RS10400;product=hypothetical protein;protein_id=WP_002456083.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	14561	15613	.	+	.	ID=gene-CP553_RS10405;Name=CP553_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10405;old_locus_tag=CP553_10780
NZ_PCFD01000035.1	Protein Homology	CDS	14561	15613	.	+	0	ID=cds-WP_002456082.1;Parent=gene-CP553_RS10405;Dbxref=GenBank:WP_002456082.1;Name=WP_002456082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474466.1;locus_tag=CP553_RS10405;product=MupG family TIM beta-alpha barrel fold protein;protein_id=WP_002456082.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	15610	16497	.	+	.	ID=gene-CP553_RS10410;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=CP553_RS10410;old_locus_tag=CP553_10785
NZ_PCFD01000035.1	Protein Homology	CDS	15610	16497	.	+	0	ID=cds-WP_002438451.1;Parent=gene-CP553_RS10410;Dbxref=GenBank:WP_002438451.1;Name=WP_002438451.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362960.1;locus_tag=CP553_RS10410;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002438451.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	16510	17934	.	+	.	ID=gene-CP553_RS10415;Name=CP553_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10415;old_locus_tag=CP553_10790
NZ_PCFD01000035.1	Protein Homology	CDS	16510	17934	.	+	0	ID=cds-WP_002438449.1;Parent=gene-CP553_RS10415;Dbxref=GenBank:WP_002438449.1;Name=WP_002438449.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485941.1;locus_tag=CP553_RS10415;product=PTS transporter subunit EIIC;protein_id=WP_002438449.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	17948	18820	.	+	.	ID=gene-CP553_RS10420;Name=CP553_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10420;old_locus_tag=CP553_10795
NZ_PCFD01000035.1	Protein Homology	CDS	17948	18820	.	+	0	ID=cds-WP_002456080.1;Parent=gene-CP553_RS10420;Dbxref=GenBank:WP_002456080.1;Name=WP_002456080.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469323.1;locus_tag=CP553_RS10420;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002456080.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	18943	20319	.	-	.	ID=gene-CP553_RS10425;Name=CP553_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10425;old_locus_tag=CP553_10800
NZ_PCFD01000035.1	Protein Homology	CDS	18943	20319	.	-	0	ID=cds-WP_002438445.1;Parent=gene-CP553_RS10425;Dbxref=GenBank:WP_002438445.1;Name=WP_002438445.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457989.1;locus_tag=CP553_RS10425;product=amino acid permease;protein_id=WP_002438445.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	20718	21074	.	+	.	ID=gene-CP553_RS10430;Name=CP553_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10430;old_locus_tag=CP553_10805
NZ_PCFD01000035.1	Protein Homology	CDS	20718	21074	.	+	0	ID=cds-WP_002438443.1;Parent=gene-CP553_RS10430;Dbxref=GenBank:WP_002438443.1;Name=WP_002438443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464759.1;locus_tag=CP553_RS10430;product=hypothetical protein;protein_id=WP_002438443.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	21071	21256	.	+	.	ID=gene-CP553_RS10435;Name=CP553_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10435;old_locus_tag=CP553_10810
NZ_PCFD01000035.1	Protein Homology	CDS	21071	21256	.	+	0	ID=cds-WP_001830056.1;Parent=gene-CP553_RS10435;Dbxref=GenBank:WP_001830056.1;Name=WP_001830056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447263.1;locus_tag=CP553_RS10435;product=hypothetical protein;protein_id=WP_001830056.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	21572	21760	.	-	.	ID=gene-CP553_RS10440;Name=CP553_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10440;old_locus_tag=CP553_10815
NZ_PCFD01000035.1	Protein Homology	CDS	21572	21760	.	-	0	ID=cds-WP_002438441.1;Parent=gene-CP553_RS10440;Dbxref=GenBank:WP_002438441.1;Name=WP_002438441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438441.1;locus_tag=CP553_RS10440;product=hypothetical protein;protein_id=WP_002438441.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	21778	22413	.	-	.	ID=gene-CP553_RS10445;Name=CP553_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10445;old_locus_tag=CP553_10820
NZ_PCFD01000035.1	Protein Homology	CDS	21778	22413	.	-	0	ID=cds-WP_002456078.1;Parent=gene-CP553_RS10445;Dbxref=GenBank:WP_002456078.1;Name=WP_002456078.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496241.1;locus_tag=CP553_RS10445;product=HAD-IA family hydrolase;protein_id=WP_002456078.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	22714	23244	.	+	.	ID=gene-CP553_RS10450;Name=CP553_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10450;old_locus_tag=CP553_10825
NZ_PCFD01000035.1	Protein Homology	CDS	22714	23244	.	+	0	ID=cds-WP_001830032.1;Parent=gene-CP553_RS10450;Dbxref=GenBank:WP_001830032.1;Name=WP_001830032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447259.1;locus_tag=CP553_RS10450;product=hypothetical protein;protein_id=WP_001830032.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	23349	24938	.	-	.	ID=gene-CP553_RS10455;Name=CP553_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10455;old_locus_tag=CP553_10830
NZ_PCFD01000035.1	Protein Homology	CDS	23349	24938	.	-	0	ID=cds-WP_002438436.1;Parent=gene-CP553_RS10455;Dbxref=GenBank:WP_002438436.1;Name=WP_002438436.1;Ontology_term=GO:0009401,GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457259.1;locus_tag=CP553_RS10455;product=alpha-glucoside-specific PTS transporter subunit IIBC;protein_id=WP_002438436.1;transl_table=11
NZ_PCFD01000035.1	RefSeq	gene	25136	25897	.	+	.	ID=gene-CP553_RS10460;Name=CP553_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10460;old_locus_tag=CP553_10835
NZ_PCFD01000035.1	Protein Homology	CDS	25136	25897	.	+	0	ID=cds-WP_002438434.1;Parent=gene-CP553_RS10460;Dbxref=GenBank:WP_002438434.1;Name=WP_002438434.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362956.1;locus_tag=CP553_RS10460;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002438434.1;transl_table=11
##sequence-region NZ_PCFD01000036.1 1 22828
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000036.1	RefSeq	region	1	22828	.	+	.	ID=NZ_PCFD01000036.1:1..22828;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000036.1	RefSeq	gene	406	3156	.	-	.	ID=gene-CP553_RS10470;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=CP553_RS10470;old_locus_tag=CP553_10840
NZ_PCFD01000036.1	Protein Homology	CDS	406	3156	.	-	0	ID=cds-WP_002439427.1;Parent=gene-CP553_RS10470;Dbxref=GenBank:WP_002439427.1;Name=WP_002439427.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499699.1;locus_tag=CP553_RS10470;product=isoleucine--tRNA ligase;protein_id=WP_002439427.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	3471	4127	.	-	.	ID=gene-CP553_RS10475;Name=CP553_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10475;old_locus_tag=CP553_10845
NZ_PCFD01000036.1	Protein Homology	CDS	3471	4127	.	-	0	ID=cds-WP_001830163.1;Parent=gene-CP553_RS10475;Dbxref=GenBank:WP_001830163.1;Name=WP_001830163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475942.1;locus_tag=CP553_RS10475;product=DivIVA domain-containing protein;protein_id=WP_001830163.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	4150	4926	.	-	.	ID=gene-CP553_RS10480;Name=CP553_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10480;old_locus_tag=CP553_10850
NZ_PCFD01000036.1	Protein Homology	CDS	4150	4926	.	-	0	ID=cds-WP_044117632.1;Parent=gene-CP553_RS10480;Dbxref=GenBank:WP_044117632.1;Name=WP_044117632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001827493.1;locus_tag=CP553_RS10480;product=RNA-binding protein;protein_id=WP_044117632.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	5067	5357	.	-	.	ID=gene-CP553_RS10485;Name=CP553_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10485;old_locus_tag=CP553_10855
NZ_PCFD01000036.1	Protein Homology	CDS	5067	5357	.	-	0	ID=cds-WP_001830086.1;Parent=gene-CP553_RS10485;Dbxref=GenBank:WP_001830086.1;Name=WP_001830086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830086.1;locus_tag=CP553_RS10485;product=YggT family protein;protein_id=WP_001830086.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	5369	5962	.	-	.	ID=gene-CP553_RS10490;Name=CP553_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10490;old_locus_tag=CP553_10860
NZ_PCFD01000036.1	Protein Homology	CDS	5369	5962	.	-	0	ID=cds-WP_001830143.1;Parent=gene-CP553_RS10490;Dbxref=GenBank:WP_001830143.1;Name=WP_001830143.1;Ontology_term=GO:0000917,GO:0043093,GO:0090529;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446233.1;locus_tag=CP553_RS10490;product=cell division protein SepF;protein_id=WP_001830143.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	5976	6644	.	-	.	ID=gene-CP553_RS10495;Name=CP553_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10495;old_locus_tag=CP553_10865
NZ_PCFD01000036.1	Protein Homology	CDS	5976	6644	.	-	0	ID=cds-WP_001830146.1;Parent=gene-CP553_RS10495;Dbxref=GenBank:WP_001830146.1;Name=WP_001830146.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498392.1;locus_tag=CP553_RS10495;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_001830146.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	6670	7461	.	-	.	ID=gene-CP553_RS10500;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=CP553_RS10500;old_locus_tag=CP553_10870
NZ_PCFD01000036.1	Protein Homology	CDS	6670	7461	.	-	0	ID=cds-WP_002439418.1;Parent=gene-CP553_RS10500;Dbxref=GenBank:WP_002439418.1;Name=WP_002439418.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439418.1;locus_tag=CP553_RS10500;product=peptidoglycan editing factor PgeF;protein_id=WP_002439418.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	7881	9065	.	-	.	ID=gene-CP553_RS10505;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=CP553_RS10505;old_locus_tag=CP553_10875
NZ_PCFD01000036.1	Protein Homology	CDS	7881	9065	.	-	0	ID=cds-WP_002439417.1;Parent=gene-CP553_RS10505;Dbxref=GenBank:WP_002439417.1;Name=WP_002439417.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499692.1;locus_tag=CP553_RS10505;product=cell division protein FtsZ;protein_id=WP_002439417.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	9098	10492	.	-	.	ID=gene-CP553_RS10510;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=CP553_RS10510;old_locus_tag=CP553_10880
NZ_PCFD01000036.1	Protein Homology	CDS	9098	10492	.	-	0	ID=cds-WP_002439415.1;Parent=gene-CP553_RS10510;Dbxref=GenBank:WP_002439415.1;Name=WP_002439415.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499691.1;locus_tag=CP553_RS10510;product=cell division protein FtsA;protein_id=WP_002439415.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	10598	11989	.	-	.	ID=gene-CP553_RS10515;Name=CP553_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10515;old_locus_tag=CP553_10885
NZ_PCFD01000036.1	Protein Homology	CDS	10598	11989	.	-	0	ID=cds-WP_002456230.1;Parent=gene-CP553_RS10515;Dbxref=GenBank:WP_002456230.1;Name=WP_002456230.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503084.1;locus_tag=CP553_RS10515;product=cell division protein FtsQ/DivIB;protein_id=WP_002456230.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	12005	13354	.	-	.	ID=gene-CP553_RS10520;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=CP553_RS10520;old_locus_tag=CP553_10890
NZ_PCFD01000036.1	Protein Homology	CDS	12005	13354	.	-	0	ID=cds-WP_001830127.1;Parent=gene-CP553_RS10520;Dbxref=GenBank:WP_001830127.1;Name=WP_001830127.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499689.1;locus_tag=CP553_RS10520;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_001830127.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	13356	14321	.	-	.	ID=gene-CP553_RS10525;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=CP553_RS10525;old_locus_tag=CP553_10895
NZ_PCFD01000036.1	Protein Homology	CDS	13356	14321	.	-	0	ID=cds-WP_001830122.1;Parent=gene-CP553_RS10525;Dbxref=GenBank:WP_001830122.1;Name=WP_001830122.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499688.1;locus_tag=CP553_RS10525;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_001830122.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	14510	16837	.	-	.	ID=gene-CP553_RS10530;Name=CP553_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10530;old_locus_tag=CP553_10900
NZ_PCFD01000036.1	Protein Homology	CDS	14510	16837	.	-	0	ID=cds-WP_002439409.1;Parent=gene-CP553_RS10530;Dbxref=GenBank:WP_002439409.1;Name=WP_002439409.1;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368615.1;locus_tag=CP553_RS10530;product=penicillin-binding protein;protein_id=WP_002439409.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	16818	17219	.	-	.	ID=gene-CP553_RS10535;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=CP553_RS10535;old_locus_tag=CP553_10905
NZ_PCFD01000036.1	Protein Homology	CDS	16818	17219	.	-	0	ID=cds-WP_002439407.1;Parent=gene-CP553_RS10535;Dbxref=GenBank:WP_002439407.1;Name=WP_002439407.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499686.1;locus_tag=CP553_RS10535;product=cell division protein FtsL;protein_id=WP_002439407.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	17232	18167	.	-	.	ID=gene-CP553_RS10540;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=CP553_RS10540;old_locus_tag=CP553_10910
NZ_PCFD01000036.1	Protein Homology	CDS	17232	18167	.	-	0	ID=cds-WP_002439405.1;Parent=gene-CP553_RS10540;Dbxref=GenBank:WP_002439405.1;Name=WP_002439405.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724209.1;locus_tag=CP553_RS10540;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_002439405.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	18182	18613	.	-	.	ID=gene-CP553_RS10545;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=CP553_RS10545;old_locus_tag=CP553_10915
NZ_PCFD01000036.1	Protein Homology	CDS	18182	18613	.	-	0	ID=cds-WP_001830185.1;Parent=gene-CP553_RS10545;Dbxref=GenBank:WP_001830185.1;Name=WP_001830185.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900043.1;locus_tag=CP553_RS10545;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_001830185.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	18757	20370	.	-	.	ID=gene-CP553_RS10550;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=CP553_RS10550;old_locus_tag=CP553_10920
NZ_PCFD01000036.1	Protein Homology	CDS	18757	20370	.	-	0	ID=cds-WP_002439402.1;Parent=gene-CP553_RS10550;Dbxref=GenBank:WP_002439402.1;Name=WP_002439402.1;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485008.1;locus_tag=CP553_RS10550;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=WP_002439402.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	20554	20994	.	+	.	ID=gene-CP553_RS10555;Name=CP553_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10555;old_locus_tag=CP553_10925
NZ_PCFD01000036.1	Protein Homology	CDS	20554	20994	.	+	0	ID=cds-WP_001830066.1;Parent=gene-CP553_RS10555;Dbxref=GenBank:WP_001830066.1;Name=WP_001830066.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446220.1;locus_tag=CP553_RS10555;product=N-acetyltransferase;protein_id=WP_001830066.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	21103	21789	.	-	.	ID=gene-CP553_RS10560;Name=CP553_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10560;old_locus_tag=CP553_10930
NZ_PCFD01000036.1	Protein Homology	CDS	21103	21789	.	-	0	ID=cds-WP_001830150.1;Parent=gene-CP553_RS10560;Dbxref=GenBank:WP_001830150.1;Name=WP_001830150.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511240.1;locus_tag=CP553_RS10560;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_001830150.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	21897	22031	.	-	.	ID=gene-CP553_RS10565;Name=CP553_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10565;old_locus_tag=CP553_10935
NZ_PCFD01000036.1	Protein Homology	CDS	21897	22031	.	-	0	ID=cds-WP_001830095.1;Parent=gene-CP553_RS10565;Dbxref=GenBank:WP_001830095.1;Name=WP_001830095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830095.1;locus_tag=CP553_RS10565;product=beta-class phenol-soluble modulin;protein_id=WP_001830095.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	22087	22221	.	-	.	ID=gene-CP553_RS10570;Name=CP553_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10570;old_locus_tag=CP553_10940
NZ_PCFD01000036.1	Protein Homology	CDS	22087	22221	.	-	0	ID=cds-WP_001830095.1-2;Parent=gene-CP553_RS10570;Dbxref=GenBank:WP_001830095.1;Name=WP_001830095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830095.1;locus_tag=CP553_RS10570;product=beta-class phenol-soluble modulin;protein_id=WP_001830095.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	22273	22407	.	-	.	ID=gene-CP553_RS10575;Name=CP553_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10575;old_locus_tag=CP553_10945
NZ_PCFD01000036.1	Protein Homology	CDS	22273	22407	.	-	0	ID=cds-WP_001830190.1;Parent=gene-CP553_RS10575;Dbxref=GenBank:WP_001830190.1;Name=WP_001830190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830190.1;locus_tag=CP553_RS10575;product=beta-class phenol-soluble modulin;protein_id=WP_001830190.1;transl_table=11
NZ_PCFD01000036.1	RefSeq	gene	22463	22594	.	-	.	ID=gene-CP553_RS10580;Name=CP553_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10580;old_locus_tag=CP553_10950
NZ_PCFD01000036.1	Protein Homology	CDS	22463	22594	.	-	0	ID=cds-WP_002439398.1;Parent=gene-CP553_RS10580;Dbxref=GenBank:WP_002439398.1;Name=WP_002439398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473295.1;locus_tag=CP553_RS10580;product=beta-class phenol-soluble modulin;protein_id=WP_002439398.1;transl_table=11
##sequence-region NZ_PCFD01000037.1 1 21217
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000037.1	RefSeq	region	1	21217	.	+	.	ID=NZ_PCFD01000037.1:1..21217;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000037.1	RefSeq	gene	90	581	.	+	.	ID=gene-CP553_RS10585;Name=CP553_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10585;old_locus_tag=CP553_10955
NZ_PCFD01000037.1	Protein Homology	CDS	90	581	.	+	0	ID=cds-WP_369964122.1;Parent=gene-CP553_RS10585;Dbxref=GenBank:WP_369964122.1;Name=WP_369964122.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477576.1;locus_tag=CP553_RS10585;product=thioredoxin family protein;protein_id=WP_369964122.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	712	1443	.	-	.	ID=gene-CP553_RS10590;Name=pmtD;gbkey=Gene;gene=pmtD;gene_biotype=protein_coding;locus_tag=CP553_RS10590;old_locus_tag=CP553_10960
NZ_PCFD01000037.1	Protein Homology	CDS	712	1443	.	-	0	ID=cds-WP_001830379.1;Parent=gene-CP553_RS10590;Dbxref=GenBank:WP_001830379.1;Name=WP_001830379.1;gbkey=CDS;gene=pmtD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830379.1;locus_tag=CP553_RS10590;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;protein_id=WP_001830379.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	1443	2315	.	-	.	ID=gene-CP553_RS10595;Name=pmtC;gbkey=Gene;gene=pmtC;gene_biotype=protein_coding;locus_tag=CP553_RS10595;old_locus_tag=CP553_10965
NZ_PCFD01000037.1	Protein Homology	CDS	1443	2315	.	-	0	ID=cds-WP_001830444.1;Parent=gene-CP553_RS10595;Dbxref=GenBank:WP_001830444.1;Name=WP_001830444.1;gbkey=CDS;gene=pmtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830444.1;locus_tag=CP553_RS10595;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;protein_id=WP_001830444.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	2336	2995	.	-	.	ID=gene-CP553_RS10600;Name=pmtB;gbkey=Gene;gene=pmtB;gene_biotype=protein_coding;locus_tag=CP553_RS10600;old_locus_tag=CP553_10970
NZ_PCFD01000037.1	Protein Homology	CDS	2336	2995	.	-	0	ID=cds-WP_002495542.1;Parent=gene-CP553_RS10600;Dbxref=GenBank:WP_002495542.1;Name=WP_002495542.1;gbkey=CDS;gene=pmtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494112.1;locus_tag=CP553_RS10600;product=phenol-soluble modulin export ABC transporter permease subunit PmtB;protein_id=WP_002495542.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	2976	3890	.	-	.	ID=gene-CP553_RS10605;Name=pmtA;gbkey=Gene;gene=pmtA;gene_biotype=protein_coding;locus_tag=CP553_RS10605;old_locus_tag=CP553_10975
NZ_PCFD01000037.1	Protein Homology	CDS	2976	3890	.	-	0	ID=cds-WP_001830432.1;Parent=gene-CP553_RS10605;Dbxref=GenBank:WP_001830432.1;Name=WP_001830432.1;gbkey=CDS;gene=pmtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830432.1;locus_tag=CP553_RS10605;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtA;protein_id=WP_001830432.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	3890	4267	.	-	.	ID=gene-CP553_RS10610;Name=pmtR;gbkey=Gene;gene=pmtR;gene_biotype=protein_coding;locus_tag=CP553_RS10610;old_locus_tag=CP553_10980
NZ_PCFD01000037.1	Protein Homology	CDS	3890	4267	.	-	0	ID=cds-WP_001830364.1;Parent=gene-CP553_RS10610;Dbxref=GenBank:WP_001830364.1;Name=WP_001830364.1;gbkey=CDS;gene=pmtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469536.1;locus_tag=CP553_RS10610;product=PSM export ABC transporter transcriptional regulator PmtR;protein_id=WP_001830364.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	4584	4754	.	-	.	ID=gene-CP553_RS10615;Name=CP553_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10615;old_locus_tag=CP553_10985
NZ_PCFD01000037.1	Protein Homology	CDS	4584	4754	.	-	0	ID=cds-WP_001832481.1;Parent=gene-CP553_RS10615;Dbxref=GenBank:WP_001832481.1;Name=WP_001832481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435928.1;locus_tag=CP553_RS10615;product=SE1626 family protein;protein_id=WP_001832481.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	4941	5036	.	-	.	ID=gene-CP553_RS12845;Name=CP553_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12845;old_locus_tag=CP553_10990
NZ_PCFD01000037.1	Protein Homology	CDS	4941	5036	.	-	0	ID=cds-WP_002440392.1;Parent=gene-CP553_RS12845;Dbxref=GenBank:WP_002440392.1;Name=WP_002440392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440392.1;locus_tag=CP553_RS12845;product=Trp-rich small protein;protein_id=WP_002440392.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	5231	6517	.	+	.	ID=gene-CP553_RS10620;Name=CP553_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10620;old_locus_tag=CP553_10995
NZ_PCFD01000037.1	Protein Homology	CDS	5231	6517	.	+	0	ID=cds-WP_002495543.1;Parent=gene-CP553_RS10620;Dbxref=GenBank:WP_002495543.1;Name=WP_002495543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498971.1;locus_tag=CP553_RS10620;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_002495543.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	6948	7979	.	-	.	ID=gene-CP553_RS10625;Name=CP553_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10625;old_locus_tag=CP553_11000
NZ_PCFD01000037.1	Protein Homology	CDS	6948	7979	.	-	0	ID=cds-WP_001830441.1;Parent=gene-CP553_RS10625;Dbxref=GenBank:WP_001830441.1;Name=WP_001830441.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830441.1;locus_tag=CP553_RS10625;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_001830441.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	8724	9044	.	+	.	ID=gene-CP553_RS10630;Name=CP553_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10630;old_locus_tag=CP553_11005
NZ_PCFD01000037.1	GeneMarkS-2+	CDS	8724	9044	.	+	0	ID=cds-WP_133230775.1;Parent=gene-CP553_RS10630;Dbxref=GenBank:WP_133230775.1;Name=WP_133230775.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS10630;product=hypothetical protein;protein_id=WP_133230775.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	9092	9862	.	-	.	ID=gene-CP553_RS10635;Name=CP553_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10635;old_locus_tag=CP553_11010
NZ_PCFD01000037.1	Protein Homology	CDS	9092	9862	.	-	0	ID=cds-WP_002491492.1;Parent=gene-CP553_RS10635;Dbxref=GenBank:WP_002491492.1;Name=WP_002491492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512197.1;locus_tag=CP553_RS10635;product=hypothetical protein;protein_id=WP_002491492.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	10267	10875	.	+	.	ID=gene-CP553_RS10640;Name=CP553_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10640;old_locus_tag=CP553_11015
NZ_PCFD01000037.1	Protein Homology	CDS	10267	10875	.	+	0	ID=cds-WP_231647060.1;Parent=gene-CP553_RS10640;Dbxref=GenBank:WP_231647060.1;Name=WP_231647060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500565.1;locus_tag=CP553_RS10640;product=peptidase;protein_id=WP_231647060.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	12356	13066	.	-	.	ID=gene-CP553_RS10645;Name=CP553_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10645;old_locus_tag=CP553_11030
NZ_PCFD01000037.1	Protein Homology	CDS	12356	13066	.	-	0	ID=cds-WP_331461760.1;Parent=gene-CP553_RS10645;Dbxref=GenBank:WP_331461760.1;Name=WP_331461760.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042819.4;locus_tag=CP553_RS10645;product=DUF6731 family protein;protein_id=WP_331461760.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	13063	13245	.	-	.	ID=gene-CP553_RS10650;Name=CP553_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10650;old_locus_tag=CP553_11035
NZ_PCFD01000037.1	GeneMarkS-2+	CDS	13063	13245	.	-	0	ID=cds-WP_116843016.1;Parent=gene-CP553_RS10650;Dbxref=GenBank:WP_116843016.1;Name=WP_116843016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS10650;product=hypothetical protein;protein_id=WP_116843016.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	13402	13884	.	-	.	ID=gene-CP553_RS10655;Name=CP553_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10655;old_locus_tag=CP553_11040
NZ_PCFD01000037.1	Protein Homology	CDS	13402	13884	.	-	0	ID=cds-WP_070534004.1;Parent=gene-CP553_RS10655;Dbxref=GenBank:WP_070534004.1;Name=WP_070534004.1;Ontology_term=GO:0051276,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487953.1;locus_tag=CP553_RS10655;product=terminase small subunit;protein_id=WP_070534004.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	13944	14630	.	-	.	ID=gene-CP553_RS10660;Name=CP553_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10660;old_locus_tag=CP553_11045
NZ_PCFD01000037.1	Protein Homology	CDS	13944	14630	.	-	0	ID=cds-WP_116843017.1;Parent=gene-CP553_RS10660;Dbxref=GenBank:WP_116843017.1;Name=WP_116843017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501453.1;locus_tag=CP553_RS10660;product=hypothetical protein;protein_id=WP_116843017.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	14650	15183	.	-	.	ID=gene-CP553_RS10665;Name=CP553_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10665;old_locus_tag=CP553_11050
NZ_PCFD01000037.1	Protein Homology	CDS	14650	15183	.	-	0	ID=cds-WP_032603293.1;Parent=gene-CP553_RS10665;Dbxref=GenBank:WP_032603293.1;Name=WP_032603293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501454.1;locus_tag=CP553_RS10665;product=hypothetical protein;protein_id=WP_032603293.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	15196	15534	.	-	.	ID=gene-CP553_RS10670;Name=CP553_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10670;old_locus_tag=CP553_11055
NZ_PCFD01000037.1	Protein Homology	CDS	15196	15534	.	-	0	ID=cds-WP_002438931.1;Parent=gene-CP553_RS10670;Dbxref=GenBank:WP_002438931.1;Name=WP_002438931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499927.1;locus_tag=CP553_RS10670;product=hypothetical protein;protein_id=WP_002438931.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	15870	16511	.	-	.	ID=gene-CP553_RS10675;Name=CP553_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10675;old_locus_tag=CP553_11060
NZ_PCFD01000037.1	Protein Homology	CDS	15870	16511	.	-	0	ID=cds-WP_032603294.1;Parent=gene-CP553_RS10675;Dbxref=GenBank:WP_032603294.1;Name=WP_032603294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365392.1;locus_tag=CP553_RS10675;product=pathogenicity island protein;protein_id=WP_032603294.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	16525	16890	.	-	.	ID=gene-CP553_RS10680;Name=CP553_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10680;old_locus_tag=CP553_11065
NZ_PCFD01000037.1	Protein Homology	CDS	16525	16890	.	-	0	ID=cds-WP_002491508.1;Parent=gene-CP553_RS10680;Dbxref=GenBank:WP_002491508.1;Name=WP_002491508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491508.1;locus_tag=CP553_RS10680;product=hypothetical protein;protein_id=WP_002491508.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	17217	18926	.	-	.	ID=gene-CP553_RS10685;Name=CP553_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10685;old_locus_tag=CP553_11070
NZ_PCFD01000037.1	Protein Homology	CDS	17217	18926	.	-	0	ID=cds-WP_002497544.1;Parent=gene-CP553_RS10685;Dbxref=GenBank:WP_002497544.1;Name=WP_002497544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611933.1;locus_tag=CP553_RS10685;product=DUF927 domain-containing protein;protein_id=WP_002497544.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	18941	19813	.	-	.	ID=gene-CP553_RS10690;Name=CP553_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10690;old_locus_tag=CP553_11075
NZ_PCFD01000037.1	Protein Homology	CDS	18941	19813	.	-	0	ID=cds-WP_116843018.1;Parent=gene-CP553_RS10690;Dbxref=GenBank:WP_116843018.1;Name=WP_116843018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491527.1;locus_tag=CP553_RS10690;product=primase alpha helix C-terminal domain-containing protein;protein_id=WP_116843018.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	19900	20241	.	-	.	ID=gene-CP553_RS10695;Name=CP553_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10695;old_locus_tag=CP553_11080
NZ_PCFD01000037.1	Protein Homology	CDS	19900	20241	.	-	0	ID=cds-WP_116843019.1;Parent=gene-CP553_RS10695;Dbxref=GenBank:WP_116843019.1;Name=WP_116843019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500553.1;locus_tag=CP553_RS10695;product=hypothetical protein;protein_id=WP_116843019.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	20246	20455	.	-	.	ID=gene-CP553_RS10700;Name=tscA;gbkey=Gene;gene=tscA;gene_biotype=protein_coding;locus_tag=CP553_RS10700;old_locus_tag=CP553_11085
NZ_PCFD01000037.1	Protein Homology	CDS	20246	20455	.	-	0	ID=cds-WP_057492986.1;Parent=gene-CP553_RS10700;Dbxref=GenBank:WP_057492986.1;Name=WP_057492986.1;Ontology_term=GO:0110001;gbkey=CDS;gene=tscA;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477488.1;locus_tag=CP553_RS10700;product=type II toxin-antitoxin system antitoxin TscA;protein_id=WP_057492986.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	20459	20602	.	-	.	ID=gene-CP553_RS10705;Name=CP553_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10705
NZ_PCFD01000037.1	Protein Homology	CDS	20459	20602	.	-	0	ID=cds-WP_002470330.1;Parent=gene-CP553_RS10705;Dbxref=GenBank:WP_002470330.1;Name=WP_002470330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491531.1;locus_tag=CP553_RS10705;product=hypothetical protein;protein_id=WP_002470330.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	20595	20915	.	-	.	ID=gene-CP553_RS10710;Name=CP553_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10710;old_locus_tag=CP553_11090
NZ_PCFD01000037.1	Protein Homology	CDS	20595	20915	.	-	0	ID=cds-WP_002485645.1;Parent=gene-CP553_RS10710;Dbxref=GenBank:WP_002485645.1;Name=WP_002485645.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470305.1;locus_tag=CP553_RS10710;product=helix-turn-helix domain-containing protein;protein_id=WP_002485645.1;transl_table=11
NZ_PCFD01000037.1	RefSeq	gene	20919	21137	.	-	.	ID=gene-CP553_RS10715;Name=CP553_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10715;old_locus_tag=CP553_11095
NZ_PCFD01000037.1	Protein Homology	CDS	20919	21137	.	-	0	ID=cds-WP_002491519.1;Parent=gene-CP553_RS10715;Dbxref=GenBank:WP_002491519.1;Name=WP_002491519.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000153639.1;locus_tag=CP553_RS10715;product=helix-turn-helix domain-containing protein;protein_id=WP_002491519.1;transl_table=11
##sequence-region NZ_PCFD01000038.1 1 20783
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000038.1	RefSeq	region	1	20783	.	+	.	ID=NZ_PCFD01000038.1:1..20783;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000038.1	RefSeq	pseudogene	506	1527	.	+	.	ID=gene-CP553_RS10720;Name=CP553_RS10720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS10720;old_locus_tag=CP553_11100;pseudo=true
NZ_PCFD01000038.1	Protein Homology	CDS	506	1527	.	+	0	ID=cds-CP553_RS10720;Parent=gene-CP553_RS10720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503543.1;locus_tag=CP553_RS10720;product=AbrB family transcriptional regulator;pseudo=true;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	1694	2254	.	-	.	ID=gene-CP553_RS10725;Name=CP553_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10725;old_locus_tag=CP553_11105
NZ_PCFD01000038.1	Protein Homology	CDS	1694	2254	.	-	0	ID=cds-WP_001830783.1;Parent=gene-CP553_RS10725;Dbxref=GenBank:WP_001830783.1;Name=WP_001830783.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464987.1;locus_tag=CP553_RS10725;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001830783.1;transl_table=11
NZ_PCFD01000038.1	cmsearch	binding_site	2318	2553	.	+	.	ID=id-NZ_PCFD01000038.1:2318..2553;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PCFD01000038.1	RefSeq	gene	2597	5227	.	+	.	ID=gene-CP553_RS10730;Name=CP553_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10730;old_locus_tag=CP553_11110
NZ_PCFD01000038.1	Protein Homology	CDS	2597	5227	.	+	0	ID=cds-WP_001830862.1;Parent=gene-CP553_RS10730;Dbxref=GenBank:WP_001830862.1;Name=WP_001830862.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500272.1;locus_tag=CP553_RS10730;product=valine--tRNA ligase;protein_id=WP_001830862.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	5238	6503	.	+	.	ID=gene-CP553_RS10735;Name=CP553_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10735;old_locus_tag=CP553_11115
NZ_PCFD01000038.1	Protein Homology	CDS	5238	6503	.	+	0	ID=cds-WP_002440172.1;Parent=gene-CP553_RS10735;Dbxref=GenBank:WP_002440172.1;Name=WP_002440172.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457793.1;locus_tag=CP553_RS10735;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_002440172.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	6687	7397	.	+	.	ID=gene-CP553_RS10740;Name=CP553_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10740;old_locus_tag=CP553_11120
NZ_PCFD01000038.1	Protein Homology	CDS	6687	7397	.	+	0	ID=cds-WP_002440170.1;Parent=gene-CP553_RS10740;Dbxref=GenBank:WP_002440170.1;Name=WP_002440170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502356.1;locus_tag=CP553_RS10740;product=A24 family peptidase;protein_id=WP_002440170.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	7394	8074	.	+	.	ID=gene-CP553_RS10745;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=CP553_RS10745;old_locus_tag=CP553_11125
NZ_PCFD01000038.1	Protein Homology	CDS	7394	8074	.	+	0	ID=cds-WP_001830861.1;Parent=gene-CP553_RS10745;Dbxref=GenBank:WP_001830861.1;Name=WP_001830861.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830861.1;locus_tag=CP553_RS10745;product=RadC family protein;protein_id=WP_001830861.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	8138	8317	.	-	.	ID=gene-CP553_RS10750;Name=CP553_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10750;old_locus_tag=CP553_11130
NZ_PCFD01000038.1	Protein Homology	CDS	8138	8317	.	-	0	ID=cds-WP_001830753.1;Parent=gene-CP553_RS10750;Dbxref=GenBank:WP_001830753.1;Name=WP_001830753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446629.1;locus_tag=CP553_RS10750;product=hypothetical protein;protein_id=WP_001830753.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	8482	8967	.	+	.	ID=gene-CP553_RS10755;Name=CP553_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10755;old_locus_tag=CP553_11135
NZ_PCFD01000038.1	Protein Homology	CDS	8482	8967	.	+	0	ID=cds-WP_001832708.1;Parent=gene-CP553_RS10755;Dbxref=GenBank:WP_001832708.1;Name=WP_001832708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497965.1;locus_tag=CP553_RS10755;product=DUF4930 family protein;protein_id=WP_001832708.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	9051	9191	.	+	.	ID=gene-CP553_RS10760;Name=CP553_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10760;old_locus_tag=CP553_11140
NZ_PCFD01000038.1	Protein Homology	CDS	9051	9191	.	+	0	ID=cds-WP_001830756.1;Parent=gene-CP553_RS10760;Dbxref=GenBank:WP_001830756.1;Name=WP_001830756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830756.1;locus_tag=CP553_RS10760;product=hypothetical protein;protein_id=WP_001830756.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	9598	10437	.	+	.	ID=gene-CP553_RS10765;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=CP553_RS10765;old_locus_tag=CP553_11145
NZ_PCFD01000038.1	Protein Homology	CDS	9598	10437	.	+	0	ID=cds-WP_002440165.1;Parent=gene-CP553_RS10765;Dbxref=GenBank:WP_002440165.1;Name=WP_002440165.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012083861.1;locus_tag=CP553_RS10765;product=rod shape-determining protein MreC;protein_id=WP_002440165.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	10437	10958	.	+	.	ID=gene-CP553_RS10770;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=CP553_RS10770;old_locus_tag=CP553_11150
NZ_PCFD01000038.1	Protein Homology	CDS	10437	10958	.	+	0	ID=cds-WP_001830764.1;Parent=gene-CP553_RS10770;Dbxref=GenBank:WP_001830764.1;Name=WP_001830764.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830764.1;locus_tag=CP553_RS10770;product=rod shape-determining protein MreD;protein_id=WP_001830764.1;transl_table=11
NZ_PCFD01000038.1	cmsearch	sequence_feature	10991	11067	.	+	.	ID=id-NZ_PCFD01000038.1:10991..11067;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_PCFD01000038.1	RefSeq	gene	11080	11388	.	+	.	ID=gene-CP553_RS10775;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=CP553_RS10775;old_locus_tag=CP553_11155
NZ_PCFD01000038.1	Protein Homology	CDS	11080	11388	.	+	0	ID=cds-WP_001830820.1;Parent=gene-CP553_RS10775;Dbxref=GenBank:WP_001830820.1;Name=WP_001830820.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1;locus_tag=CP553_RS10775;product=50S ribosomal protein L21;protein_id=WP_001830820.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	11393	11713	.	+	.	ID=gene-CP553_RS10780;Name=CP553_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10780;old_locus_tag=CP553_11160
NZ_PCFD01000038.1	Protein Homology	CDS	11393	11713	.	+	0	ID=cds-WP_001830797.1;Parent=gene-CP553_RS10780;Dbxref=GenBank:WP_001830797.1;Name=WP_001830797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633692.1;locus_tag=CP553_RS10780;product=ribosomal-processing cysteine protease Prp;protein_id=WP_001830797.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	11725	12009	.	+	.	ID=gene-CP553_RS10785;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=CP553_RS10785;old_locus_tag=CP553_11165
NZ_PCFD01000038.1	Protein Homology	CDS	11725	12009	.	+	0	ID=cds-WP_001830822.1;Parent=gene-CP553_RS10785;Dbxref=GenBank:WP_001830822.1;Name=WP_001830822.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382703.1;locus_tag=CP553_RS10785;product=50S ribosomal protein L27;protein_id=WP_001830822.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	12155	13447	.	+	.	ID=gene-CP553_RS10790;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=CP553_RS10790;old_locus_tag=CP553_11170
NZ_PCFD01000038.1	Protein Homology	CDS	12155	13447	.	+	0	ID=cds-WP_002440162.1;Parent=gene-CP553_RS10790;Dbxref=GenBank:WP_002440162.1;Name=WP_002440162.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444729.1;locus_tag=CP553_RS10790;product=GTPase ObgE;protein_id=WP_002440162.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	13459	13914	.	+	.	ID=gene-CP553_RS10795;Name=CP553_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10795;old_locus_tag=CP553_11175
NZ_PCFD01000038.1	Protein Homology	CDS	13459	13914	.	+	0	ID=cds-WP_001830784.1;Parent=gene-CP553_RS10795;Dbxref=GenBank:WP_001830784.1;Name=WP_001830784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275576.1;locus_tag=CP553_RS10795;product=ACT domain-containing protein;protein_id=WP_001830784.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	13927	14529	.	+	.	ID=gene-CP553_RS10800;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=CP553_RS10800;old_locus_tag=CP553_11180
NZ_PCFD01000038.1	Protein Homology	CDS	13927	14529	.	+	0	ID=cds-WP_001830895.1;Parent=gene-CP553_RS10800;Dbxref=GenBank:WP_001830895.1;Name=WP_001830895.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500257.1;locus_tag=CP553_RS10800;product=Holliday junction branch migration protein RuvA;protein_id=WP_001830895.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	14543	15547	.	+	.	ID=gene-CP553_RS10805;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=CP553_RS10805;old_locus_tag=CP553_11185
NZ_PCFD01000038.1	Protein Homology	CDS	14543	15547	.	+	0	ID=cds-WP_001830787.1;Parent=gene-CP553_RS10805;Dbxref=GenBank:WP_001830787.1;Name=WP_001830787.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500256.1;locus_tag=CP553_RS10805;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_001830787.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	15549	16574	.	+	.	ID=gene-CP553_RS10810;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=CP553_RS10810;old_locus_tag=CP553_11190
NZ_PCFD01000038.1	Protein Homology	CDS	15549	16574	.	+	0	ID=cds-WP_002456163.1;Parent=gene-CP553_RS10810;Dbxref=GenBank:WP_002456163.1;Name=WP_002456163.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500255.1;locus_tag=CP553_RS10810;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_002456163.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	16595	17734	.	+	.	ID=gene-CP553_RS10815;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=CP553_RS10815;old_locus_tag=CP553_11195
NZ_PCFD01000038.1	Protein Homology	CDS	16595	17734	.	+	0	ID=cds-WP_001830840.1;Parent=gene-CP553_RS10815;Dbxref=GenBank:WP_001830840.1;Name=WP_001830840.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425271.1;locus_tag=CP553_RS10815;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_001830840.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	17750	18010	.	+	.	ID=gene-CP553_RS10820;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=CP553_RS10820;old_locus_tag=CP553_11200
NZ_PCFD01000038.1	Protein Homology	CDS	17750	18010	.	+	0	ID=cds-WP_001830800.1;Parent=gene-CP553_RS10820;Dbxref=GenBank:WP_001830800.1;Name=WP_001830800.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464991.1;locus_tag=CP553_RS10820;product=preprotein translocase subunit YajC;protein_id=WP_001830800.1;transl_table=11
NZ_PCFD01000038.1	RefSeq	gene	18349	20640	.	+	.	ID=gene-CP553_RS10825;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=CP553_RS10825;old_locus_tag=CP553_11205
NZ_PCFD01000038.1	Protein Homology	CDS	18349	20640	.	+	0	ID=cds-WP_001830863.1;Parent=gene-CP553_RS10825;Dbxref=GenBank:WP_001830863.1;Name=WP_001830863.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500252.2;locus_tag=CP553_RS10825;product=protein translocase subunit SecDF;protein_id=WP_001830863.1;transl_table=11
##sequence-region NZ_PCFD01000039.1 1 19886
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000039.1	RefSeq	region	1	19886	.	+	.	ID=NZ_PCFD01000039.1:1..19886;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000039.1	RefSeq	gene	376	1566	.	+	.	ID=gene-CP553_RS10830;Name=CP553_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10830;old_locus_tag=CP553_11210
NZ_PCFD01000039.1	Protein Homology	CDS	376	1566	.	+	0	ID=cds-WP_002439062.1;Parent=gene-CP553_RS10830;Dbxref=GenBank:WP_002439062.1;Name=WP_002439062.1;Ontology_term=GO:0004587,GO:0030170;gbkey=CDS;go_function=ornithine aminotransferase activity|0004587||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457191.1;locus_tag=CP553_RS10830;product=ornithine--oxo-acid transaminase;protein_id=WP_002439062.1;transl_table=11
NZ_PCFD01000039.1	RefSeq	gene	1675	2919	.	+	.	ID=gene-CP553_RS10835;Name=CP553_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10835;old_locus_tag=CP553_11215
NZ_PCFD01000039.1	Protein Homology	CDS	1675	2919	.	+	0	ID=cds-WP_001831995.1;Parent=gene-CP553_RS10835;Dbxref=GenBank:WP_001831995.1;Name=WP_001831995.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503494.1;locus_tag=CP553_RS10835;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001831995.1;transl_table=11
NZ_PCFD01000039.1	RefSeq	gene	3111	4160	.	-	.	ID=gene-CP553_RS10840;Name=CP553_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10840;old_locus_tag=CP553_11220
NZ_PCFD01000039.1	Protein Homology	CDS	3111	4160	.	-	0	ID=cds-WP_002439066.1;Parent=gene-CP553_RS10840;Dbxref=GenBank:WP_002439066.1;Name=WP_002439066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493444.1;locus_tag=CP553_RS10840;product=glycerophosphodiester phosphodiesterase;protein_id=WP_002439066.1;transl_table=11
NZ_PCFD01000039.1	RefSeq	gene	4311	5702	.	-	.	ID=gene-CP553_RS10845;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=CP553_RS10845;old_locus_tag=CP553_11225
NZ_PCFD01000039.1	Protein Homology	CDS	4311	5702	.	-	0	ID=cds-WP_002439068.1;Parent=gene-CP553_RS10845;Dbxref=GenBank:WP_002439068.1;Name=WP_002439068.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439068.1;locus_tag=CP553_RS10845;product=argininosuccinate lyase;protein_id=WP_002439068.1;transl_table=11
NZ_PCFD01000039.1	RefSeq	gene	5692	6897	.	-	.	ID=gene-CP553_RS10850;Name=CP553_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10850;old_locus_tag=CP553_11230
NZ_PCFD01000039.1	Protein Homology	CDS	5692	6897	.	-	0	ID=cds-WP_001832499.1;Parent=gene-CP553_RS10850;Dbxref=GenBank:WP_001832499.1;Name=WP_001832499.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499452.1;locus_tag=CP553_RS10850;product=argininosuccinate synthase;protein_id=WP_001832499.1;transl_table=11
NZ_PCFD01000039.1	RefSeq	gene	7243	8574	.	+	.	ID=gene-CP553_RS10855;Name=CP553_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10855;old_locus_tag=CP553_11235
NZ_PCFD01000039.1	Protein Homology	CDS	7243	8574	.	+	0	ID=cds-WP_002439071.1;Parent=gene-CP553_RS10855;Dbxref=GenBank:WP_002439071.1;Name=WP_002439071.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499453.1;locus_tag=CP553_RS10855;product=glucose-6-phosphate isomerase;protein_id=WP_002439071.1;transl_table=11
NZ_PCFD01000039.1	RefSeq	gene	8892	9467	.	+	.	ID=gene-CP553_RS10860;Name=CP553_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10860;old_locus_tag=CP553_11240
NZ_PCFD01000039.1	Protein Homology	CDS	8892	9467	.	+	0	ID=cds-WP_001831991.1;Parent=gene-CP553_RS10860;Dbxref=GenBank:WP_001831991.1;Name=WP_001831991.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498264.1;locus_tag=CP553_RS10860;product=TVP38/TMEM64 family protein;protein_id=WP_001831991.1;transl_table=11
NZ_PCFD01000039.1	RefSeq	gene	9471	9992	.	+	.	ID=gene-CP553_RS10865;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CP553_RS10865;old_locus_tag=CP553_11245
NZ_PCFD01000039.1	Protein Homology	CDS	9471	9992	.	+	0	ID=cds-WP_002439073.1;Parent=gene-CP553_RS10865;Dbxref=GenBank:WP_002439073.1;Name=WP_002439073.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476515.1;locus_tag=CP553_RS10865;product=signal peptidase I;protein_id=WP_002439073.1;transl_table=11
NZ_PCFD01000039.1	RefSeq	gene	10011	10586	.	+	.	ID=gene-CP553_RS10870;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=CP553_RS10870;old_locus_tag=CP553_11250
NZ_PCFD01000039.1	Protein Homology	CDS	10011	10586	.	+	0	ID=cds-WP_001831955.1;Parent=gene-CP553_RS10870;Dbxref=GenBank:WP_001831955.1;Name=WP_001831955.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465318.1;locus_tag=CP553_RS10870;product=signal peptidase I;protein_id=WP_001831955.1;transl_table=11
NZ_PCFD01000039.1	RefSeq	gene	10707	14186	.	+	.	ID=gene-CP553_RS10875;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=CP553_RS10875;old_locus_tag=CP553_11255
NZ_PCFD01000039.1	Protein Homology	CDS	10707	14186	.	+	0	ID=cds-WP_002439076.1;Parent=gene-CP553_RS10875;Dbxref=GenBank:WP_002439076.1;Name=WP_002439076.1;Ontology_term=GO:0000724,GO:0004527;gbkey=CDS;gene=addB;go_function=exonuclease activity|0004527||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000172362.1;locus_tag=CP553_RS10875;product=helicase-exonuclease AddAB subunit AddB;protein_id=WP_002439076.1;transl_table=11
NZ_PCFD01000039.1	RefSeq	gene	14173	17829	.	+	.	ID=gene-CP553_RS10880;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=CP553_RS10880;old_locus_tag=CP553_11260
NZ_PCFD01000039.1	Protein Homology	CDS	14173	17829	.	+	0	ID=cds-WP_002456111.1;Parent=gene-CP553_RS10880;Dbxref=GenBank:WP_002456111.1;Name=WP_002456111.1;Ontology_term=GO:0000724,GO:0006302,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA,double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495360.1;locus_tag=CP553_RS10880;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_002456111.1;transl_table=11
NZ_PCFD01000039.1	RefSeq	gene	18028	18933	.	+	.	ID=gene-CP553_RS10885;Name=CP553_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10885;old_locus_tag=CP553_11265
NZ_PCFD01000039.1	Protein Homology	CDS	18028	18933	.	+	0	ID=cds-WP_001831933.1;Parent=gene-CP553_RS10885;Dbxref=GenBank:WP_001831933.1;Name=WP_001831933.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504053.1;locus_tag=CP553_RS10885;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001831933.1;transl_table=11
NZ_PCFD01000039.1	RefSeq	gene	19291	19692	.	+	.	ID=gene-CP553_RS10890;Name=CP553_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10890;old_locus_tag=CP553_11270
NZ_PCFD01000039.1	Protein Homology	CDS	19291	19692	.	+	0	ID=cds-WP_001831989.1;Parent=gene-CP553_RS10890;Dbxref=GenBank:WP_001831989.1;Name=WP_001831989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831989.1;locus_tag=CP553_RS10890;product=YisL family protein;protein_id=WP_001831989.1;transl_table=11
##sequence-region NZ_PCFD01000040.1 1 19828
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000040.1	RefSeq	region	1	19828	.	+	.	ID=NZ_PCFD01000040.1:1..19828;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000040.1	RefSeq	gene	27	440	.	+	.	ID=gene-CP553_RS10895;Name=CP553_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10895;old_locus_tag=CP553_11280
NZ_PCFD01000040.1	Protein Homology	CDS	27	440	.	+	0	ID=cds-WP_231647061.1;Parent=gene-CP553_RS10895;Dbxref=GenBank:WP_231647061.1;Name=WP_231647061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831197.1;locus_tag=CP553_RS10895;product=ComGF family competence protein;protein_id=WP_231647061.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	605	1117	.	+	.	ID=gene-CP553_RS10900;Name=CP553_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10900;old_locus_tag=CP553_11290
NZ_PCFD01000040.1	Protein Homology	CDS	605	1117	.	+	0	ID=cds-WP_002440040.1;Parent=gene-CP553_RS10900;Dbxref=GenBank:WP_002440040.1;Name=WP_002440040.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446528.1;locus_tag=CP553_RS10900;product=shikimate kinase;protein_id=WP_002440040.1;transl_table=11
NZ_PCFD01000040.1	cmsearch	riboswitch	1114	1256	.	+	.	ID=id-NZ_PCFD01000040.1:1114..1256;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_PCFD01000040.1	RefSeq	gene	1335	2426	.	+	.	ID=gene-CP553_RS10905;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=CP553_RS10905;old_locus_tag=CP553_11295
NZ_PCFD01000040.1	Protein Homology	CDS	1335	2426	.	+	0	ID=cds-WP_001831107.1;Parent=gene-CP553_RS10905;Dbxref=GenBank:WP_001831107.1;Name=WP_001831107.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500147.1;locus_tag=CP553_RS10905;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_001831107.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	2446	3792	.	+	.	ID=gene-CP553_RS10910;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=CP553_RS10910;old_locus_tag=CP553_11300
NZ_PCFD01000040.1	Protein Homology	CDS	2446	3792	.	+	0	ID=cds-WP_002456181.1;Parent=gene-CP553_RS10910;Dbxref=GenBank:WP_002456181.1;Name=WP_002456181.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500146.1;locus_tag=CP553_RS10910;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WP_002456181.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	3785	5293	.	+	.	ID=gene-CP553_RS10915;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=CP553_RS10915;old_locus_tag=CP553_11305
NZ_PCFD01000040.1	Protein Homology	CDS	3785	5293	.	+	0	ID=cds-WP_001831087.1;Parent=gene-CP553_RS10915;Dbxref=GenBank:WP_001831087.1;Name=WP_001831087.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502375.1;locus_tag=CP553_RS10915;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WP_001831087.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	pseudogene	5744	6086	.	+	.	ID=gene-CP553_RS10920;Name=CP553_RS10920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS10920;old_locus_tag=CP553_11310;partial=true;pseudo=true;start_range=.,5744
NZ_PCFD01000040.1	Protein Homology	CDS	5744	6086	.	+	0	ID=cds-CP553_RS10920;Parent=gene-CP553_RS10920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830915.1;locus_tag=CP553_RS10920;partial=true;product=transposase;pseudo=true;start_range=.,5744;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	6185	6571	.	-	.	ID=gene-CP553_RS10925;Name=CP553_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10925;old_locus_tag=CP553_11315
NZ_PCFD01000040.1	Protein Homology	CDS	6185	6571	.	-	0	ID=cds-WP_001831303.1;Parent=gene-CP553_RS10925;Dbxref=GenBank:WP_001831303.1;Name=WP_001831303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500144.1;locus_tag=CP553_RS10925;product=rhodanese-like domain-containing protein;protein_id=WP_001831303.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	6731	7561	.	+	.	ID=gene-CP553_RS10930;Name=CP553_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10930;old_locus_tag=CP553_11320
NZ_PCFD01000040.1	Protein Homology	CDS	6731	7561	.	+	0	ID=cds-WP_001830993.1;Parent=gene-CP553_RS10930;Dbxref=GenBank:WP_001830993.1;Name=WP_001830993.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500143.1;locus_tag=CP553_RS10930;product=lipoate--protein ligase family protein;protein_id=WP_001830993.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	7602	7820	.	-	.	ID=gene-CP553_RS10935;Name=CP553_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10935;old_locus_tag=CP553_11325
NZ_PCFD01000040.1	Protein Homology	CDS	7602	7820	.	-	0	ID=cds-WP_001831076.1;Parent=gene-CP553_RS10935;Dbxref=GenBank:WP_001831076.1;Name=WP_001831076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501003.1;locus_tag=CP553_RS10935;product=SA1362 family protein;protein_id=WP_001831076.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	7834	8412	.	-	.	ID=gene-CP553_RS10940;Name=CP553_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10940;old_locus_tag=CP553_11330
NZ_PCFD01000040.1	Protein Homology	CDS	7834	8412	.	-	0	ID=cds-WP_001831193.1;Parent=gene-CP553_RS10940;Dbxref=GenBank:WP_001831193.1;Name=WP_001831193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490955.1;locus_tag=CP553_RS10940;product=hypothetical protein;protein_id=WP_001831193.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	8515	9576	.	+	.	ID=gene-CP553_RS10945;Name=CP553_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10945;old_locus_tag=CP553_11335
NZ_PCFD01000040.1	Protein Homology	CDS	8515	9576	.	+	0	ID=cds-WP_001831174.1;Parent=gene-CP553_RS10945;Dbxref=GenBank:WP_001831174.1;Name=WP_001831174.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020364170.1;locus_tag=CP553_RS10945;product=M24 family metallopeptidase;protein_id=WP_001831174.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	9603	10160	.	+	.	ID=gene-CP553_RS10950;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=CP553_RS10950;old_locus_tag=CP553_11340
NZ_PCFD01000040.1	Protein Homology	CDS	9603	10160	.	+	0	ID=cds-WP_001831269.1;Parent=gene-CP553_RS10950;Dbxref=GenBank:WP_001831269.1;Name=WP_001831269.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626504.1;locus_tag=CP553_RS10950;product=elongation factor P;protein_id=WP_001831269.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	10310	11335	.	+	.	ID=gene-CP553_RS10955;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=CP553_RS10955;old_locus_tag=CP553_11345
NZ_PCFD01000040.1	Protein Homology	CDS	10310	11335	.	+	0	ID=cds-WP_002440029.1;Parent=gene-CP553_RS10955;Dbxref=GenBank:WP_002440029.1;Name=WP_002440029.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830986.1;locus_tag=CP553_RS10955;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_002440029.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	11354	12547	.	+	.	ID=gene-CP553_RS10960;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=CP553_RS10960;old_locus_tag=CP553_11350
NZ_PCFD01000040.1	Protein Homology	CDS	11354	12547	.	+	0	ID=cds-WP_001831095.1;Parent=gene-CP553_RS10960;Dbxref=GenBank:WP_001831095.1;Name=WP_001831095.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-L-ornithine as donor|0004358||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473742.1;locus_tag=CP553_RS10960;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_001831095.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	12557	13294	.	+	.	ID=gene-CP553_RS10965;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=CP553_RS10965;old_locus_tag=CP553_11355
NZ_PCFD01000040.1	Protein Homology	CDS	12557	13294	.	+	0	ID=cds-WP_001830946.1;Parent=gene-CP553_RS10965;Dbxref=GenBank:WP_001830946.1;Name=WP_001830946.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446518.1;locus_tag=CP553_RS10965;product=acetylglutamate kinase;protein_id=WP_001830946.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	13294	14424	.	+	.	ID=gene-CP553_RS10970;Name=CP553_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10970;old_locus_tag=CP553_11360
NZ_PCFD01000040.1	Protein Homology	CDS	13294	14424	.	+	0	ID=cds-WP_002440024.1;Parent=gene-CP553_RS10970;Dbxref=GenBank:WP_002440024.1;Name=WP_002440024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468437.1;locus_tag=CP553_RS10970;product=acetylornithine transaminase;protein_id=WP_002440024.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	14682	15149	.	+	.	ID=gene-CP553_RS10975;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=CP553_RS10975;old_locus_tag=CP553_11365
NZ_PCFD01000040.1	Protein Homology	CDS	14682	15149	.	+	0	ID=cds-WP_001831211.1;Parent=gene-CP553_RS10975;Dbxref=GenBank:WP_001831211.1;Name=WP_001831211.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473583.1;locus_tag=CP553_RS10975;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_001831211.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	15149	16507	.	+	.	ID=gene-CP553_RS10980;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=CP553_RS10980;old_locus_tag=CP553_11370
NZ_PCFD01000040.1	Protein Homology	CDS	15149	16507	.	+	0	ID=cds-WP_002440022.1;Parent=gene-CP553_RS10980;Dbxref=GenBank:WP_002440022.1;Name=WP_002440022.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440022.1;locus_tag=CP553_RS10980;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002440022.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	16519	16881	.	+	.	ID=gene-CP553_RS10985;Name=CP553_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS10985;old_locus_tag=CP553_11375
NZ_PCFD01000040.1	Protein Homology	CDS	16519	16881	.	+	0	ID=cds-WP_002440021.1;Parent=gene-CP553_RS10985;Dbxref=GenBank:WP_002440021.1;Name=WP_002440021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500136.1;locus_tag=CP553_RS10985;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_002440021.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	16957	17346	.	+	.	ID=gene-CP553_RS10990;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=CP553_RS10990;old_locus_tag=CP553_11380
NZ_PCFD01000040.1	Protein Homology	CDS	16957	17346	.	+	0	ID=cds-WP_001831090.1;Parent=gene-CP553_RS10990;Dbxref=GenBank:WP_001831090.1;Name=WP_001831090.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473744.1;locus_tag=CP553_RS10990;product=transcription antitermination factor NusB;protein_id=WP_001831090.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	17361	18698	.	+	.	ID=gene-CP553_RS10995;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=CP553_RS10995;old_locus_tag=CP553_11385
NZ_PCFD01000040.1	Protein Homology	CDS	17361	18698	.	+	0	ID=cds-WP_116843020.1;Parent=gene-CP553_RS10995;Dbxref=GenBank:WP_116843020.1;Name=WP_116843020.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500134.1;locus_tag=CP553_RS10995;product=exodeoxyribonuclease VII large subunit;protein_id=WP_116843020.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	18691	18921	.	+	.	ID=gene-CP553_RS11000;Name=CP553_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11000;old_locus_tag=CP553_11390
NZ_PCFD01000040.1	Protein Homology	CDS	18691	18921	.	+	0	ID=cds-WP_001830935.1;Parent=gene-CP553_RS11000;Dbxref=GenBank:WP_001830935.1;Name=WP_001830935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500133.1;locus_tag=CP553_RS11000;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001830935.1;transl_table=11
NZ_PCFD01000040.1	RefSeq	gene	18899	19780	.	+	.	ID=gene-CP553_RS11005;Name=CP553_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11005;old_locus_tag=CP553_11395
NZ_PCFD01000040.1	Protein Homology	CDS	18899	19780	.	+	0	ID=cds-WP_002440017.1;Parent=gene-CP553_RS11005;Dbxref=GenBank:WP_002440017.1;Name=WP_002440017.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503987.1;locus_tag=CP553_RS11005;product=polyprenyl synthetase family protein;protein_id=WP_002440017.1;transl_table=11
##sequence-region NZ_PCFD01000041.1 1 19792
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000041.1	RefSeq	region	1	19792	.	+	.	ID=NZ_PCFD01000041.1:1..19792;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000041.1	RefSeq	gene	394	549	.	+	.	ID=gene-CP553_RS11010;Name=CP553_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11010
NZ_PCFD01000041.1	GeneMarkS-2+	CDS	394	549	.	+	0	ID=cds-WP_001829299.1;Parent=gene-CP553_RS11010;Dbxref=GenBank:WP_001829299.1;Name=WP_001829299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS11010;product=hypothetical protein;protein_id=WP_001829299.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	760	2076	.	-	.	ID=gene-CP553_RS11015;Name=CP553_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11015;old_locus_tag=CP553_11400
NZ_PCFD01000041.1	Protein Homology	CDS	760	2076	.	-	0	ID=cds-WP_001829263.1;Parent=gene-CP553_RS11015;Dbxref=GenBank:WP_001829263.1;Name=WP_001829263.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499461.1;locus_tag=CP553_RS11015;product=CoA-disulfide reductase;protein_id=WP_001829263.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	2154	2975	.	-	.	ID=gene-CP553_RS11020;Name=CP553_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11020;old_locus_tag=CP553_11405
NZ_PCFD01000041.1	Protein Homology	CDS	2154	2975	.	-	0	ID=cds-WP_001829328.1;Parent=gene-CP553_RS11020;Dbxref=GenBank:WP_001829328.1;Name=WP_001829328.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829328.1;locus_tag=CP553_RS11020;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_001829328.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	3088	3396	.	+	.	ID=gene-CP553_RS11025;Name=CP553_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11025;old_locus_tag=CP553_11410
NZ_PCFD01000041.1	Protein Homology	CDS	3088	3396	.	+	0	ID=cds-WP_001829290.1;Parent=gene-CP553_RS11025;Dbxref=GenBank:WP_001829290.1;Name=WP_001829290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486294.1;locus_tag=CP553_RS11025;product=metal-sulfur cluster assembly factor;protein_id=WP_001829290.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	3791	5614	.	+	.	ID=gene-CP553_RS11030;Name=CP553_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11030;old_locus_tag=CP553_11415
NZ_PCFD01000041.1	Protein Homology	CDS	3791	5614	.	+	0	ID=cds-WP_002439088.1;Parent=gene-CP553_RS11030;Dbxref=GenBank:WP_002439088.1;Name=WP_002439088.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476521.1;locus_tag=CP553_RS11030;product=acyltransferase family protein;protein_id=WP_002439088.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	5823	8432	.	+	.	ID=gene-CP553_RS11035;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=CP553_RS11035;old_locus_tag=CP553_11420
NZ_PCFD01000041.1	Protein Homology	CDS	5823	8432	.	+	0	ID=cds-WP_001829334.1;Parent=gene-CP553_RS11035;Dbxref=GenBank:WP_001829334.1;Name=WP_001829334.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475121.1;locus_tag=CP553_RS11035;product=ATP-dependent chaperone ClpB;protein_id=WP_001829334.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	8611	8805	.	-	.	ID=gene-CP553_RS11040;Name=CP553_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11040;old_locus_tag=CP553_11425
NZ_PCFD01000041.1	Protein Homology	CDS	8611	8805	.	-	0	ID=cds-WP_001829320.1;Parent=gene-CP553_RS11040;Dbxref=GenBank:WP_001829320.1;Name=WP_001829320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457178.1;locus_tag=CP553_RS11040;product=YjzD family protein;protein_id=WP_001829320.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	9087	10028	.	+	.	ID=gene-CP553_RS11045;Name=CP553_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11045;old_locus_tag=CP553_11430
NZ_PCFD01000041.1	Protein Homology	CDS	9087	10028	.	+	0	ID=cds-WP_001829261.1;Parent=gene-CP553_RS11045;Dbxref=GenBank:WP_001829261.1;Name=WP_001829261.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369794.1;locus_tag=CP553_RS11045;product=beta-ketoacyl-ACP synthase III;protein_id=WP_001829261.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	10040	11284	.	+	.	ID=gene-CP553_RS11050;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=CP553_RS11050;old_locus_tag=CP553_11435
NZ_PCFD01000041.1	Protein Homology	CDS	10040	11284	.	+	0	ID=cds-WP_002439093.1;Parent=gene-CP553_RS11050;Dbxref=GenBank:WP_002439093.1;Name=WP_002439093.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464399.1;locus_tag=CP553_RS11050;product=beta-ketoacyl-ACP synthase II;protein_id=WP_002439093.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	11355	11726	.	-	.	ID=gene-CP553_RS11055;Name=CP553_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11055;old_locus_tag=CP553_11440
NZ_PCFD01000041.1	Protein Homology	CDS	11355	11726	.	-	0	ID=cds-WP_002439095.1;Parent=gene-CP553_RS11055;Dbxref=GenBank:WP_002439095.1;Name=WP_002439095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829304.1;locus_tag=CP553_RS11055;product=DUF3899 domain-containing protein;protein_id=WP_002439095.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	11967	12893	.	+	.	ID=gene-CP553_RS11060;Name=opp3b;gbkey=Gene;gene=opp3b;gene_biotype=protein_coding;locus_tag=CP553_RS11060;old_locus_tag=CP553_11445
NZ_PCFD01000041.1	Protein Homology	CDS	11967	12893	.	+	0	ID=cds-WP_001829338.1;Parent=gene-CP553_RS11060;Dbxref=GenBank:WP_001829338.1;Name=WP_001829338.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3b;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499476.1;locus_tag=CP553_RS11060;product=oligopeptide ABC transporter permease;protein_id=WP_001829338.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	12893	13963	.	+	.	ID=gene-CP553_RS11065;Name=opp3C;gbkey=Gene;gene=opp3C;gene_biotype=protein_coding;locus_tag=CP553_RS11065;old_locus_tag=CP553_11450
NZ_PCFD01000041.1	Protein Homology	CDS	12893	13963	.	+	0	ID=cds-WP_001829251.1;Parent=gene-CP553_RS11065;Dbxref=GenBank:WP_001829251.1;Name=WP_001829251.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493433.1;locus_tag=CP553_RS11065;product=oligopeptide ABC transporter permease;protein_id=WP_001829251.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	13978	15057	.	+	.	ID=gene-CP553_RS11070;Name=CP553_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11070;old_locus_tag=CP553_11455
NZ_PCFD01000041.1	Protein Homology	CDS	13978	15057	.	+	0	ID=cds-WP_002439099.1;Parent=gene-CP553_RS11070;Dbxref=GenBank:WP_002439099.1;Name=WP_002439099.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439099.1;locus_tag=CP553_RS11070;product=ABC transporter ATP-binding protein;protein_id=WP_002439099.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	15050	15991	.	+	.	ID=gene-CP553_RS11075;Name=CP553_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11075;old_locus_tag=CP553_11460
NZ_PCFD01000041.1	Protein Homology	CDS	15050	15991	.	+	0	ID=cds-WP_002439101.1;Parent=gene-CP553_RS11075;Dbxref=GenBank:WP_002439101.1;Name=WP_002439101.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446068.1;locus_tag=CP553_RS11075;product=ABC transporter ATP-binding protein;protein_id=WP_002439101.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	16015	17658	.	+	.	ID=gene-CP553_RS11080;Name=CP553_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11080;old_locus_tag=CP553_11465
NZ_PCFD01000041.1	Protein Homology	CDS	16015	17658	.	+	0	ID=cds-WP_002468777.1;Parent=gene-CP553_RS11080;Dbxref=GenBank:WP_002468777.1;Name=WP_002468777.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113781.1;locus_tag=CP553_RS11080;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002468777.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	17716	18705	.	-	.	ID=gene-CP553_RS11085;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=CP553_RS11085;old_locus_tag=CP553_11470
NZ_PCFD01000041.1	Protein Homology	CDS	17716	18705	.	-	0	ID=cds-WP_002439107.1;Parent=gene-CP553_RS11085;Dbxref=GenBank:WP_002439107.1;Name=WP_002439107.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276231.1;locus_tag=CP553_RS11085;product=tryptophan--tRNA ligase;protein_id=WP_002439107.1;transl_table=11
NZ_PCFD01000041.1	RefSeq	gene	18996	19391	.	+	.	ID=gene-CP553_RS11090;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;locus_tag=CP553_RS11090;old_locus_tag=CP553_11475
NZ_PCFD01000041.1	Protein Homology	CDS	18996	19391	.	+	0	ID=cds-WP_001829294.1;Parent=gene-CP553_RS11090;Dbxref=GenBank:WP_001829294.1;Name=WP_001829294.1;Ontology_term=GO:0045892;gbkey=CDS;gene=spxA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499487.1;locus_tag=CP553_RS11090;product=transcriptional regulator SpxA;protein_id=WP_001829294.1;transl_table=11
##sequence-region NZ_PCFD01000042.1 1 16634
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000042.1	RefSeq	region	1	16634	.	+	.	ID=NZ_PCFD01000042.1:1..16634;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000042.1	RefSeq	gene	669	1328	.	+	.	ID=gene-CP553_RS11100;Name=CP553_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11100;old_locus_tag=CP553_11490
NZ_PCFD01000042.1	Protein Homology	CDS	669	1328	.	+	0	ID=cds-WP_001830971.1;Parent=gene-CP553_RS11100;Dbxref=GenBank:WP_001830971.1;Name=WP_001830971.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499946.1;locus_tag=CP553_RS11100;product=response regulator transcription factor;protein_id=WP_001830971.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	1325	2695	.	+	.	ID=gene-CP553_RS11105;Name=CP553_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11105;old_locus_tag=CP553_11495
NZ_PCFD01000042.1	Protein Homology	CDS	1325	2695	.	+	0	ID=cds-WP_002439729.1;Parent=gene-CP553_RS11105;Dbxref=GenBank:WP_002439729.1;Name=WP_002439729.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489435.1;locus_tag=CP553_RS11105;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_002439729.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	3110	5914	.	+	.	ID=gene-CP553_RS11110;Name=CP553_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11110;old_locus_tag=CP553_11505
NZ_PCFD01000042.1	Protein Homology	CDS	3110	5914	.	+	0	ID=cds-WP_002439724.1;Parent=gene-CP553_RS11110;Dbxref=GenBank:WP_002439724.1;Name=WP_002439724.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493623.1;locus_tag=CP553_RS11110;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_002439724.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	5932	7194	.	+	.	ID=gene-CP553_RS11115;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=CP553_RS11115;old_locus_tag=CP553_11510
NZ_PCFD01000042.1	Protein Homology	CDS	5932	7194	.	+	0	ID=cds-WP_002439722.1;Parent=gene-CP553_RS11115;Dbxref=GenBank:WP_002439722.1;Name=WP_002439722.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476746.1;locus_tag=CP553_RS11115;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_002439722.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	7358	7531	.	-	.	ID=gene-CP553_RS11120;Name=CP553_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11120;old_locus_tag=CP553_11515
NZ_PCFD01000042.1	Protein Homology	CDS	7358	7531	.	-	0	ID=cds-WP_002439720.1;Parent=gene-CP553_RS11120;Dbxref=GenBank:WP_002439720.1;Name=WP_002439720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831077.1;locus_tag=CP553_RS11120;product=hypothetical protein;protein_id=WP_002439720.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	7732	8541	.	+	.	ID=gene-CP553_RS11125;Name=CP553_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11125;old_locus_tag=CP553_11520
NZ_PCFD01000042.1	Protein Homology	CDS	7732	8541	.	+	0	ID=cds-WP_002439718.1;Parent=gene-CP553_RS11125;Dbxref=GenBank:WP_002439718.1;Name=WP_002439718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831172.1;locus_tag=CP553_RS11125;product=VOC family protein;protein_id=WP_002439718.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	8566	8769	.	+	.	ID=gene-CP553_RS11130;Name=CP553_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11130;old_locus_tag=CP553_11525
NZ_PCFD01000042.1	Protein Homology	CDS	8566	8769	.	+	0	ID=cds-WP_001831030.1;Parent=gene-CP553_RS11130;Dbxref=GenBank:WP_001831030.1;Name=WP_001831030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499941.2;locus_tag=CP553_RS11130;product=DUF6501 family protein;protein_id=WP_001831030.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	8947	9738	.	+	.	ID=gene-CP553_RS11135;Name=CP553_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11135;old_locus_tag=CP553_11530
NZ_PCFD01000042.1	Protein Homology	CDS	8947	9738	.	+	0	ID=cds-WP_002456194.1;Parent=gene-CP553_RS11135;Dbxref=GenBank:WP_002456194.1;Name=WP_002456194.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831311.1;locus_tag=CP553_RS11135;product=ATP-binding protein;protein_id=WP_002456194.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	9751	11640	.	+	.	ID=gene-CP553_RS11140;Name=CP553_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11140;old_locus_tag=CP553_11535
NZ_PCFD01000042.1	Protein Homology	CDS	9751	11640	.	+	0	ID=cds-WP_001831071.1;Parent=gene-CP553_RS11140;Dbxref=GenBank:WP_001831071.1;Name=WP_001831071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499939.1;locus_tag=CP553_RS11140;product=vWA domain-containing protein;protein_id=WP_001831071.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	11827	13170	.	+	.	ID=gene-CP553_RS11145;Name=brnQ3;gbkey=Gene;gene=brnQ3;gene_biotype=protein_coding;locus_tag=CP553_RS11145;old_locus_tag=CP553_11540
NZ_PCFD01000042.1	Protein Homology	CDS	11827	13170	.	+	0	ID=cds-WP_002439713.1;Parent=gene-CP553_RS11145;Dbxref=GenBank:WP_002439713.1;Name=WP_002439713.1;gbkey=CDS;gene=brnQ3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303123.1;locus_tag=CP553_RS11145;product=branched-chain amino acid-like transporter carrier protein BrnQ3;protein_id=WP_002439713.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	13246	14376	.	-	.	ID=gene-CP553_RS11150;Name=CP553_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11150;old_locus_tag=CP553_11545
NZ_PCFD01000042.1	Protein Homology	CDS	13246	14376	.	-	0	ID=cds-WP_002456195.1;Parent=gene-CP553_RS11150;Dbxref=GenBank:WP_002456195.1;Name=WP_002456195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831251.1;locus_tag=CP553_RS11150;product=toxic anion resistance protein;protein_id=WP_002456195.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	14399	15025	.	-	.	ID=gene-CP553_RS11155;Name=CP553_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11155;old_locus_tag=CP553_11550
NZ_PCFD01000042.1	Protein Homology	CDS	14399	15025	.	-	0	ID=cds-WP_002476740.1;Parent=gene-CP553_RS11155;Dbxref=GenBank:WP_002476740.1;Name=WP_002476740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360285.1;locus_tag=CP553_RS11155;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=WP_002476740.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	15065	15334	.	-	.	ID=gene-CP553_RS11160;Name=CP553_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11160;old_locus_tag=CP553_11555
NZ_PCFD01000042.1	Protein Homology	CDS	15065	15334	.	-	0	ID=cds-WP_001831190.1;Parent=gene-CP553_RS11160;Dbxref=GenBank:WP_001831190.1;Name=WP_001831190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831190.1;locus_tag=CP553_RS11160;product=acylphosphatase;protein_id=WP_001831190.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	15493	15801	.	+	.	ID=gene-CP553_RS11165;Name=msaA;gbkey=Gene;gene=msaA;gene_biotype=protein_coding;locus_tag=CP553_RS11165;old_locus_tag=CP553_11560
NZ_PCFD01000042.1	Protein Homology	CDS	15493	15801	.	+	0	ID=cds-WP_002439708.1;Parent=gene-CP553_RS11165;Dbxref=GenBank:WP_002439708.1;Name=WP_002439708.1;gbkey=CDS;gene=msaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439708.1;locus_tag=CP553_RS11165;product=regulatory protein MsaA;protein_id=WP_002439708.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	gene	15982	16182	.	+	.	ID=gene-CP553_RS11170;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;gene_synonym=msaB;locus_tag=CP553_RS11170;old_locus_tag=CP553_11565
NZ_PCFD01000042.1	Protein Homology	CDS	15982	16182	.	+	0	ID=cds-WP_001831260.1;Parent=gene-CP553_RS11170;Dbxref=GenBank:WP_001831260.1;Name=WP_001831260.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1;locus_tag=CP553_RS11170;product=cold shock protein CspA;protein_id=WP_001831260.1;transl_table=11
NZ_PCFD01000042.1	RefSeq	pseudogene	16541	16634	.	+	.	ID=gene-CP553_RS12850;Name=CP553_RS12850;end_range=16634,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12850;old_locus_tag=CP553_11570;partial=true;pseudo=true
NZ_PCFD01000042.1	Protein Homology	CDS	16541	16634	.	+	0	ID=cds-CP553_RS12850;Parent=gene-CP553_RS12850;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=16634,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476739.1;locus_tag=CP553_RS12850;partial=true;product=CPBP family intramembrane glutamate endopeptidase;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000043.1 1 15915
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000043.1	RefSeq	region	1	15915	.	+	.	ID=NZ_PCFD01000043.1:1..15915;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000043.1	RefSeq	gene	1	425	.	-	.	ID=gene-CP553_RS11175;Name=CP553_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11175;old_locus_tag=CP553_11575;partial=true;start_range=.,1
NZ_PCFD01000043.1	Protein Homology	CDS	1	425	.	-	0	ID=cds-WP_116843021.1;Parent=gene-CP553_RS11175;Dbxref=GenBank:WP_116843021.1;Name=WP_116843021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233000.1;locus_tag=CP553_RS11175;partial=true;product=hypothetical protein;protein_id=WP_116843021.1;start_range=.,1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	425	1501	.	-	.	ID=gene-CP553_RS11180;Name=CP553_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11180;old_locus_tag=CP553_11580
NZ_PCFD01000043.1	Protein Homology	CDS	425	1501	.	-	0	ID=cds-WP_116843022.1;Parent=gene-CP553_RS11180;Dbxref=GenBank:WP_116843022.1;Name=WP_116843022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125496.1;locus_tag=CP553_RS11180;product=cell division protein FtsK;protein_id=WP_116843022.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	1501	1821	.	-	.	ID=gene-CP553_RS11185;Name=CP553_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11185;old_locus_tag=CP553_11585
NZ_PCFD01000043.1	Protein Homology	CDS	1501	1821	.	-	0	ID=cds-WP_012816728.1;Parent=gene-CP553_RS11185;Dbxref=GenBank:WP_012816728.1;Name=WP_012816728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466864.1;locus_tag=CP553_RS11185;product=hypothetical protein;protein_id=WP_012816728.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	2010	3317	.	+	.	ID=gene-CP553_RS11190;Name=CP553_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11190;old_locus_tag=CP553_11590
NZ_PCFD01000043.1	Protein Homology	CDS	2010	3317	.	+	0	ID=cds-WP_108000659.1;Parent=gene-CP553_RS11190;Dbxref=GenBank:WP_108000659.1;Name=WP_108000659.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=CP553_RS11190;product=helix-turn-helix domain-containing protein;protein_id=WP_108000659.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	3679	4170	.	+	.	ID=gene-CP553_RS11195;Name=CP553_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11195;old_locus_tag=CP553_11600
NZ_PCFD01000043.1	GeneMarkS-2+	CDS	3679	4170	.	+	0	ID=cds-WP_133230779.1;Parent=gene-CP553_RS11195;Dbxref=GenBank:WP_133230779.1;Name=WP_133230779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS11195;product=hypothetical protein;protein_id=WP_133230779.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	4277	4372	.	+	.	ID=gene-CP553_RS11200;Name=CP553_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11200;old_locus_tag=CP553_11605
NZ_PCFD01000043.1	Protein Homology	CDS	4277	4372	.	+	0	ID=cds-WP_019236174.1;Parent=gene-CP553_RS11200;Dbxref=GenBank:WP_019236174.1;Name=WP_019236174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495983.1;locus_tag=CP553_RS11200;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_019236174.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	4585	5208	.	+	.	ID=gene-CP553_RS11205;Name=CP553_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11205;old_locus_tag=CP553_11610
NZ_PCFD01000043.1	Protein Homology	CDS	4585	5208	.	+	0	ID=cds-WP_116843025.1;Parent=gene-CP553_RS11205;Dbxref=GenBank:WP_116843025.1;Name=WP_116843025.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274493.1;locus_tag=CP553_RS11205;product=nitroreductase family protein;protein_id=WP_116843025.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	5341	5949	.	+	.	ID=gene-CP553_RS11210;Name=CP553_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11210;old_locus_tag=CP553_11615
NZ_PCFD01000043.1	Protein Homology	CDS	5341	5949	.	+	0	ID=cds-WP_116843026.1;Parent=gene-CP553_RS11210;Dbxref=GenBank:WP_116843026.1;Name=WP_116843026.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436987.1;locus_tag=CP553_RS11210;product=recombinase family protein;protein_id=WP_116843026.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	6152	7879	.	+	.	ID=gene-CP553_RS11215;Name=CP553_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11215;old_locus_tag=CP553_11620
NZ_PCFD01000043.1	Protein Homology	CDS	6152	7879	.	+	0	ID=cds-WP_269436759.1;Parent=gene-CP553_RS11215;Dbxref=GenBank:WP_269436759.1;Name=WP_269436759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467088.1;locus_tag=CP553_RS11215;product=glycosyltransferase;protein_id=WP_269436759.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	7981	8133	.	-	.	ID=gene-CP553_RS11220;Name=CP553_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11220
NZ_PCFD01000043.1	GeneMarkS-2+	CDS	7981	8133	.	-	0	ID=cds-WP_165798627.1;Parent=gene-CP553_RS11220;Dbxref=GenBank:WP_165798627.1;Name=WP_165798627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS11220;product=hypothetical protein;protein_id=WP_165798627.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	8299	10572	.	+	.	ID=gene-CP553_RS11225;Name=CP553_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11225;old_locus_tag=CP553_11625
NZ_PCFD01000043.1	Protein Homology	CDS	8299	10572	.	+	0	ID=cds-WP_116843028.1;Parent=gene-CP553_RS11225;Dbxref=GenBank:WP_116843028.1;Name=WP_116843028.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494300.1;locus_tag=CP553_RS11225;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_116843028.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	10967	11422	.	+	.	ID=gene-CP553_RS11230;Name=CP553_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11230;old_locus_tag=CP553_11630
NZ_PCFD01000043.1	GeneMarkS-2+	CDS	10967	11422	.	+	0	ID=cds-WP_116843029.1;Parent=gene-CP553_RS11230;Dbxref=GenBank:WP_116843029.1;Name=WP_116843029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS11230;product=hypothetical protein;protein_id=WP_116843029.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	11645	11794	.	-	.	ID=gene-CP553_RS11235;Name=CP553_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11235
NZ_PCFD01000043.1	GeneMarkS-2+	CDS	11645	11794	.	-	0	ID=cds-WP_165798628.1;Parent=gene-CP553_RS11235;Dbxref=GenBank:WP_165798628.1;Name=WP_165798628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS11235;product=hypothetical protein;protein_id=WP_165798628.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	12343	12543	.	-	.	ID=gene-CP553_RS11240;Name=CP553_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11240;old_locus_tag=CP553_11640
NZ_PCFD01000043.1	Protein Homology	CDS	12343	12543	.	-	0	ID=cds-WP_000896836.1;Parent=gene-CP553_RS11240;Dbxref=GenBank:WP_000896836.1;Name=WP_000896836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448025.1;locus_tag=CP553_RS11240;product=hypothetical protein;protein_id=WP_000896836.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	12549	13343	.	-	.	ID=gene-CP553_RS11245;Name=CP553_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11245;old_locus_tag=CP553_11645
NZ_PCFD01000043.1	Protein Homology	CDS	12549	13343	.	-	0	ID=cds-WP_000022892.1;Parent=gene-CP553_RS11245;Dbxref=GenBank:WP_000022892.1;Name=WP_000022892.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366803.1;locus_tag=CP553_RS11245;product=ParA family protein;protein_id=WP_000022892.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	13992	14927	.	+	.	ID=gene-CP553_RS11250;Name=CP553_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11250;old_locus_tag=CP553_11650
NZ_PCFD01000043.1	Protein Homology	CDS	13992	14927	.	+	0	ID=cds-WP_116843030.1;Parent=gene-CP553_RS11250;Dbxref=GenBank:WP_116843030.1;Name=WP_116843030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831383.1;locus_tag=CP553_RS11250;product=replication initiator protein A;protein_id=WP_116843030.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	gene	14918	15487	.	-	.	ID=gene-CP553_RS11255;Name=CP553_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11255;old_locus_tag=CP553_11655
NZ_PCFD01000043.1	Protein Homology	CDS	14918	15487	.	-	0	ID=cds-WP_116843031.1;Parent=gene-CP553_RS11255;Dbxref=GenBank:WP_116843031.1;Name=WP_116843031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466862.1;locus_tag=CP553_RS11255;product=replication protein;protein_id=WP_116843031.1;transl_table=11
NZ_PCFD01000043.1	RefSeq	pseudogene	15611	15915	.	-	.	ID=gene-CP553_RS11260;Name=CP553_RS11260;end_range=15915,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11260;old_locus_tag=CP553_11660;partial=true;pseudo=true
NZ_PCFD01000043.1	Protein Homology	CDS	15611	15915	.	-	2	ID=cds-CP553_RS11260;Parent=gene-CP553_RS11260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=15915,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233000.1;locus_tag=CP553_RS11260;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000044.1 1 15362
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000044.1	RefSeq	region	1	15362	.	+	.	ID=NZ_PCFD01000044.1:1..15362;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000044.1	RefSeq	gene	216	1391	.	+	.	ID=gene-CP553_RS11265;Name=CP553_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11265;old_locus_tag=CP553_11665
NZ_PCFD01000044.1	Protein Homology	CDS	216	1391	.	+	0	ID=cds-WP_002437853.1;Parent=gene-CP553_RS11265;Dbxref=GenBank:WP_002437853.1;Name=WP_002437853.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496011.1;locus_tag=CP553_RS11265;product=MFS transporter;protein_id=WP_002437853.1;transl_table=11
NZ_PCFD01000044.1	RefSeq	gene	1491	3026	.	-	.	ID=gene-CP553_RS11270;Name=CP553_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11270;old_locus_tag=CP553_11670
NZ_PCFD01000044.1	Protein Homology	CDS	1491	3026	.	-	0	ID=cds-WP_001832016.1;Parent=gene-CP553_RS11270;Dbxref=GenBank:WP_001832016.1;Name=WP_001832016.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489474.1;locus_tag=CP553_RS11270;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_001832016.1;transl_table=11
NZ_PCFD01000044.1	RefSeq	gene	3123	4673	.	-	.	ID=gene-CP553_RS11275;Name=CP553_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11275;old_locus_tag=CP553_11675
NZ_PCFD01000044.1	Protein Homology	CDS	3123	4673	.	-	0	ID=cds-WP_002437856.1;Parent=gene-CP553_RS11275;Dbxref=GenBank:WP_002437856.1;Name=WP_002437856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486722.1;locus_tag=CP553_RS11275;product=Gldg family protein;protein_id=WP_002437856.1;transl_table=11
NZ_PCFD01000044.1	RefSeq	gene	4908	5864	.	+	.	ID=gene-CP553_RS11280;Name=CP553_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11280;old_locus_tag=CP553_11680
NZ_PCFD01000044.1	Protein Homology	CDS	4908	5864	.	+	0	ID=cds-WP_001832012.1;Parent=gene-CP553_RS11280;Dbxref=GenBank:WP_001832012.1;Name=WP_001832012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498705.1;locus_tag=CP553_RS11280;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WP_001832012.1;transl_table=11
NZ_PCFD01000044.1	RefSeq	gene	5978	6751	.	+	.	ID=gene-CP553_RS11285;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=CP553_RS11285;old_locus_tag=CP553_11685
NZ_PCFD01000044.1	Protein Homology	CDS	5978	6751	.	+	0	ID=cds-WP_001832011.1;Parent=gene-CP553_RS11285;Dbxref=GenBank:WP_001832011.1;Name=WP_001832011.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0016020;gbkey=CDS;gene=phnC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832011.1;locus_tag=CP553_RS11285;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_001832011.1;transl_table=11
NZ_PCFD01000044.1	RefSeq	gene	6801	7553	.	+	.	ID=gene-CP553_RS11290;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=CP553_RS11290;old_locus_tag=CP553_11690
NZ_PCFD01000044.1	Protein Homology	CDS	6801	7553	.	+	0	ID=cds-WP_002437862.1;Parent=gene-CP553_RS11290;Dbxref=GenBank:WP_002437862.1;Name=WP_002437862.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498703.1;locus_tag=CP553_RS11290;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_002437862.1;transl_table=11
NZ_PCFD01000044.1	RefSeq	gene	7550	8365	.	+	.	ID=gene-CP553_RS11295;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=CP553_RS11295;old_locus_tag=CP553_11695
NZ_PCFD01000044.1	Protein Homology	CDS	7550	8365	.	+	0	ID=cds-WP_002437864.1;Parent=gene-CP553_RS11295;Dbxref=GenBank:WP_002437864.1;Name=WP_002437864.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363741.1;locus_tag=CP553_RS11295;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_002437864.1;transl_table=11
NZ_PCFD01000044.1	RefSeq	gene	8641	9942	.	+	.	ID=gene-CP553_RS11300;Name=CP553_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11300;old_locus_tag=CP553_11700
NZ_PCFD01000044.1	Protein Homology	CDS	8641	9942	.	+	0	ID=cds-WP_002456320.1;Parent=gene-CP553_RS11300;Dbxref=GenBank:WP_002456320.1;Name=WP_002456320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446934.1;locus_tag=CP553_RS11300;product=hypothetical protein;protein_id=WP_002456320.1;transl_table=11
NZ_PCFD01000044.1	RefSeq	gene	10365	15362	.	+	.	ID=gene-CP553_RS11305;Name=CP553_RS11305;end_range=15362,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11305;old_locus_tag=CP553_11705;partial=true
NZ_PCFD01000044.1	Protein Homology	CDS	10365	15362	.	+	0	ID=cds-WP_116843032.1;Parent=gene-CP553_RS11305;Dbxref=GenBank:WP_116843032.1;Name=WP_116843032.1;end_range=15362,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364612.1;locus_tag=CP553_RS11305;partial=true;product=lectin-like domain-containing protein;protein_id=WP_116843032.1;transl_table=11
##sequence-region NZ_PCFD01000045.1 1 11639
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000045.1	RefSeq	region	1	11639	.	+	.	ID=NZ_PCFD01000045.1:1..11639;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000045.1	RefSeq	gene	86	505	.	+	.	ID=gene-CP553_RS11310;Name=CP553_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11310;old_locus_tag=CP553_11710
NZ_PCFD01000045.1	Protein Homology	CDS	86	505	.	+	0	ID=cds-WP_001831164.1;Parent=gene-CP553_RS11310;Dbxref=GenBank:WP_001831164.1;Name=WP_001831164.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831164.1;locus_tag=CP553_RS11310;product=Fur family transcriptional regulator;protein_id=WP_001831164.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	918	1517	.	+	.	ID=gene-CP553_RS11315;Name=CP553_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11315;old_locus_tag=CP553_11715
NZ_PCFD01000045.1	Protein Homology	CDS	918	1517	.	+	0	ID=cds-WP_001831217.1;Parent=gene-CP553_RS11315;Dbxref=GenBank:WP_001831217.1;Name=WP_001831217.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500165.1;locus_tag=CP553_RS11315;product=superoxide dismutase;protein_id=WP_001831217.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	1918	4005	.	+	.	ID=gene-CP553_RS11320;Name=CP553_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11320;old_locus_tag=CP553_11725
NZ_PCFD01000045.1	Protein Homology	CDS	1918	4005	.	+	0	ID=cds-WP_002440057.1;Parent=gene-CP553_RS11320;Dbxref=GenBank:WP_002440057.1;Name=WP_002440057.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456490.1;locus_tag=CP553_RS11320;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_002440057.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	4110	4259	.	+	.	ID=gene-CP553_RS11325;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=CP553_RS11325;old_locus_tag=CP553_11730
NZ_PCFD01000045.1	Protein Homology	CDS	4110	4259	.	+	0	ID=cds-WP_001830957.1;Parent=gene-CP553_RS11325;Dbxref=GenBank:WP_001830957.1;Name=WP_001830957.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=CP553_RS11325;product=50S ribosomal protein L33;protein_id=WP_001830957.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	4442	4993	.	+	.	ID=gene-CP553_RS11330;Name=CP553_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11330;old_locus_tag=CP553_11735
NZ_PCFD01000045.1	Protein Homology	CDS	4442	4993	.	+	0	ID=cds-WP_001831001.1;Parent=gene-CP553_RS11330;Dbxref=GenBank:WP_001831001.1;Name=WP_001831001.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464657.1;locus_tag=CP553_RS11330;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_001831001.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	4994	6454	.	+	.	ID=gene-CP553_RS11335;Name=CP553_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11335;old_locus_tag=CP553_11740
NZ_PCFD01000045.1	Protein Homology	CDS	4994	6454	.	+	0	ID=cds-WP_001832757.1;Parent=gene-CP553_RS11335;Dbxref=GenBank:WP_001832757.1;Name=WP_001832757.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832757.1;locus_tag=CP553_RS11335;product=rhomboid family protein;protein_id=WP_001832757.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	pseudogene	6438	6638	.	+	.	ID=gene-CP553_RS11340;Name=CP553_RS11340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11340;old_locus_tag=CP553_11745;pseudo=true
NZ_PCFD01000045.1	Protein Homology	CDS	6438	6638	.	+	0	ID=cds-CP553_RS11340;Parent=gene-CP553_RS11340;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446537.1;locus_tag=CP553_RS11340;product=YqgQ family protein;pseudo=true;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	6638	7624	.	+	.	ID=gene-CP553_RS11345;Name=CP553_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11345;old_locus_tag=CP553_11750
NZ_PCFD01000045.1	Protein Homology	CDS	6638	7624	.	+	0	ID=cds-WP_001831113.1;Parent=gene-CP553_RS11345;Dbxref=GenBank:WP_001831113.1;Name=WP_001831113.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500158.1;locus_tag=CP553_RS11345;product=ROK family glucokinase;protein_id=WP_001831113.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	7624	7950	.	+	.	ID=gene-CP553_RS11350;Name=CP553_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11350;old_locus_tag=CP553_11755
NZ_PCFD01000045.1	Protein Homology	CDS	7624	7950	.	+	0	ID=cds-WP_001831234.1;Parent=gene-CP553_RS11350;Dbxref=GenBank:WP_001831234.1;Name=WP_001831234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493575.1;locus_tag=CP553_RS11350;product=MTH1187 family thiamine-binding protein;protein_id=WP_001831234.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	7950	8573	.	+	.	ID=gene-CP553_RS11355;Name=CP553_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11355;old_locus_tag=CP553_11760
NZ_PCFD01000045.1	Protein Homology	CDS	7950	8573	.	+	0	ID=cds-WP_001831016.1;Parent=gene-CP553_RS11355;Dbxref=GenBank:WP_001831016.1;Name=WP_001831016.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500156.1;locus_tag=CP553_RS11355;product=MBL fold metallo-hydrolase;protein_id=WP_001831016.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	8630	9604	.	+	.	ID=gene-CP553_RS11360;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=CP553_RS11360;old_locus_tag=CP553_11765
NZ_PCFD01000045.1	Protein Homology	CDS	8630	9604	.	+	0	ID=cds-WP_001831109.1;Parent=gene-CP553_RS11360;Dbxref=GenBank:WP_001831109.1;Name=WP_001831109.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464658.1;locus_tag=CP553_RS11360;product=competence type IV pilus ATPase ComGA;protein_id=WP_001831109.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	9576	10643	.	+	.	ID=gene-CP553_RS11365;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=CP553_RS11365;old_locus_tag=CP553_11770
NZ_PCFD01000045.1	Protein Homology	CDS	9576	10643	.	+	0	ID=cds-WP_001831131.1;Parent=gene-CP553_RS11365;Dbxref=GenBank:WP_001831131.1;Name=WP_001831131.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831131.1;locus_tag=CP553_RS11365;product=competence type IV pilus assembly protein ComGB;protein_id=WP_001831131.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	10661	10978	.	+	.	ID=gene-CP553_RS11370;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=CP553_RS11370;old_locus_tag=CP553_11775
NZ_PCFD01000045.1	Protein Homology	CDS	10661	10978	.	+	0	ID=cds-WP_001831271.1;Parent=gene-CP553_RS11370;Dbxref=GenBank:WP_001831271.1;Name=WP_001831271.1;Ontology_term=GO:0030420;gbkey=CDS;gene=comGC;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464660.1;locus_tag=CP553_RS11370;product=competence type IV pilus major pilin ComGC;protein_id=WP_001831271.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	10968	11405	.	+	.	ID=gene-CP553_RS11375;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=CP553_RS11375;old_locus_tag=CP553_11780
NZ_PCFD01000045.1	Protein Homology	CDS	10968	11405	.	+	0	ID=cds-WP_001831025.1;Parent=gene-CP553_RS11375;Dbxref=GenBank:WP_001831025.1;Name=WP_001831025.1;gbkey=CDS;gene=comGD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446531.1;locus_tag=CP553_RS11375;product=competence type IV pilus minor pilin ComGD;protein_id=WP_001831025.1;transl_table=11
NZ_PCFD01000045.1	RefSeq	gene	11392	11639	.	+	.	ID=gene-CP553_RS11380;Name=CP553_RS11380;end_range=11639,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11380;old_locus_tag=CP553_11785;partial=true
NZ_PCFD01000045.1	Protein Homology	CDS	11392	11639	.	+	0	ID=cds-WP_116843033.1;Parent=gene-CP553_RS11380;Dbxref=GenBank:WP_116843033.1;Name=WP_116843033.1;end_range=11639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831116.1;locus_tag=CP553_RS11380;partial=true;product=hypothetical protein;protein_id=WP_116843033.1;transl_table=11
##sequence-region NZ_PCFD01000046.1 1 10628
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000046.1	RefSeq	region	1	10628	.	+	.	ID=NZ_PCFD01000046.1:1..10628;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000046.1	RefSeq	pseudogene	1	236	.	-	.	ID=gene-CP553_RS11385;Name=CP553_RS11385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11385;old_locus_tag=CP553_11790;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000046.1	Protein Homology	CDS	1	236	.	-	0	ID=cds-CP553_RS11385;Parent=gene-CP553_RS11385;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_064305258.1;locus_tag=CP553_RS11385;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000046.1	RefSeq	gene	303	1148	.	-	.	ID=gene-CP553_RS11390;Name=blaZ;gbkey=Gene;gene=blaZ;gene_biotype=protein_coding;locus_tag=CP553_RS11390;old_locus_tag=CP553_11795
NZ_PCFD01000046.1	Protein Homology	CDS	303	1148	.	-	0	ID=cds-WP_000733274.1;Parent=gene-CP553_RS11390;Dbxref=GenBank:WP_000733274.1;Name=WP_000733274.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaZ;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733274.1;locus_tag=CP553_RS11390;product=penicillin-hydrolyzing class A beta-lactamase BlaZ;protein_id=WP_000733274.1;transl_table=11
NZ_PCFD01000046.1	RefSeq	gene	1255	3012	.	+	.	ID=gene-CP553_RS11395;Name=blaR1;gbkey=Gene;gene=blaR1;gene_biotype=protein_coding;locus_tag=CP553_RS11395;old_locus_tag=CP553_11800
NZ_PCFD01000046.1	Protein Homology	CDS	1255	3012	.	+	0	ID=cds-WP_001096386.1;Parent=gene-CP553_RS11395;Dbxref=GenBank:WP_001096386.1;Name=WP_001096386.1;gbkey=CDS;gene=blaR1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096376.1;locus_tag=CP553_RS11395;product=beta-lactam sensor/signal transducer BlaR1;protein_id=WP_001096386.1;transl_table=11
NZ_PCFD01000046.1	RefSeq	gene	3002	3382	.	+	.	ID=gene-CP553_RS11400;Name=blaI;gbkey=Gene;gene=blaI;gene_biotype=protein_coding;locus_tag=CP553_RS11400;old_locus_tag=CP553_11805
NZ_PCFD01000046.1	Protein Homology	CDS	3002	3382	.	+	0	ID=cds-WP_001284653.1;Parent=gene-CP553_RS11400;Dbxref=GenBank:WP_001284653.1;Name=WP_001284653.1;Ontology_term=GO:0045892;gbkey=CDS;gene=blaI;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284656.1;locus_tag=CP553_RS11400;product=penicillinase repressor BlaI;protein_id=WP_001284653.1;transl_table=11
NZ_PCFD01000046.1	RefSeq	gene	3646	4224	.	+	.	ID=gene-CP553_RS11405;Name=CP553_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11405;old_locus_tag=CP553_11810
NZ_PCFD01000046.1	Protein Homology	CDS	3646	4224	.	+	0	ID=cds-WP_000690625.1;Parent=gene-CP553_RS11405;Dbxref=GenBank:WP_000690625.1;Name=WP_000690625.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000690624.1;locus_tag=CP553_RS11405;product=recombinase family protein;protein_id=WP_000690625.1;transl_table=11
NZ_PCFD01000046.1	RefSeq	gene	4350	4961	.	+	.	ID=gene-CP553_RS11410;Name=CP553_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11410;old_locus_tag=CP553_11815
NZ_PCFD01000046.1	Protein Homology	CDS	4350	4961	.	+	0	ID=cds-WP_000635275.1;Parent=gene-CP553_RS11410;Dbxref=GenBank:WP_000635275.1;Name=WP_000635275.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487382.1;locus_tag=CP553_RS11410;product=recombinase family protein;protein_id=WP_000635275.1;transl_table=11
NZ_PCFD01000046.1	RefSeq	gene	5111	5968	.	-	.	ID=gene-CP553_RS11415;Name=CP553_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11415;old_locus_tag=CP553_11820
NZ_PCFD01000046.1	Protein Homology	CDS	5111	5968	.	-	0	ID=cds-WP_000162894.1;Parent=gene-CP553_RS11415;Dbxref=GenBank:WP_000162894.1;Name=WP_000162894.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499202.1;locus_tag=CP553_RS11415;product=YitT family protein;protein_id=WP_000162894.1;transl_table=11
NZ_PCFD01000046.1	RefSeq	gene	6217	7347	.	-	.	ID=gene-CP553_RS11420;Name=CP553_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11420;old_locus_tag=CP553_11825
NZ_PCFD01000046.1	Protein Homology	CDS	6217	7347	.	-	0	ID=cds-WP_002456255.1;Parent=gene-CP553_RS11420;Dbxref=GenBank:WP_002456255.1;Name=WP_002456255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456255.1;locus_tag=CP553_RS11420;product=gamma-glutamyltransferase;protein_id=WP_002456255.1;transl_table=11
NZ_PCFD01000046.1	RefSeq	pseudogene	7342	7741	.	+	.	ID=gene-CP553_RS11425;Name=CP553_RS11425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11425;pseudo=true
NZ_PCFD01000046.1	Protein Homology	CDS	7342	7741	.	+	0	ID=cds-CP553_RS11425;Parent=gene-CP553_RS11425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499214.1;locus_tag=CP553_RS11425;product=VOC family protein;pseudo=true;transl_table=11
NZ_PCFD01000046.1	RefSeq	gene	7871	8608	.	-	.	ID=gene-CP553_RS11430;Name=CP553_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11430;old_locus_tag=CP553_11835
NZ_PCFD01000046.1	Protein Homology	CDS	7871	8608	.	-	0	ID=cds-WP_002455966.1;Parent=gene-CP553_RS11430;Dbxref=GenBank:WP_002455966.1;Name=WP_002455966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455828.1;locus_tag=CP553_RS11430;product=DUF536 domain-containing protein;protein_id=WP_002455966.1;transl_table=11
NZ_PCFD01000046.1	RefSeq	gene	8994	9950	.	+	.	ID=gene-CP553_RS11435;Name=CP553_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11435;old_locus_tag=CP553_11840
NZ_PCFD01000046.1	Protein Homology	CDS	8994	9950	.	+	0	ID=cds-WP_012817965.1;Parent=gene-CP553_RS11435;Dbxref=GenBank:WP_012817965.1;Name=WP_012817965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175392.1;locus_tag=CP553_RS11435;product=replication initiator protein A;protein_id=WP_012817965.1;transl_table=11
NZ_PCFD01000046.1	RefSeq	gene	10408	10628	.	-	.	ID=gene-CP553_RS11440;Name=CP553_RS11440;end_range=10628,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11440;old_locus_tag=CP553_11845;partial=true
NZ_PCFD01000046.1	Protein Homology	CDS	10408	10628	.	-	2	ID=cds-WP_133062770.1;Parent=gene-CP553_RS11440;Dbxref=GenBank:WP_133062770.1;Name=WP_133062770.1;end_range=10628,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS11440;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_133062770.1;transl_table=11
##sequence-region NZ_PCFD01000047.1 1 8724
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000047.1	RefSeq	region	1	8724	.	+	.	ID=NZ_PCFD01000047.1:1..8724;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000047.1	RefSeq	gene	1	696	.	-	.	ID=gene-CP553_RS11445;Name=CP553_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11445;old_locus_tag=CP553_11850;partial=true;start_range=.,1
NZ_PCFD01000047.1	Protein Homology	CDS	1	696	.	-	0	ID=cds-WP_133230784.1;Parent=gene-CP553_RS11445;Dbxref=GenBank:WP_133230784.1;Name=WP_133230784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500124.1;locus_tag=CP553_RS11445;partial=true;product=aromatic acid exporter family protein;protein_id=WP_133230784.1;start_range=.,1;transl_table=11
NZ_PCFD01000047.1	RefSeq	gene	709	1146	.	-	.	ID=gene-CP553_RS11450;Name=brxB;gbkey=Gene;gene=brxB;gene_biotype=protein_coding;locus_tag=CP553_RS11450;old_locus_tag=CP553_11855
NZ_PCFD01000047.1	Protein Homology	CDS	709	1146	.	-	0	ID=cds-WP_001831204.1;Parent=gene-CP553_RS11450;Dbxref=GenBank:WP_001831204.1;Name=WP_001831204.1;gbkey=CDS;gene=brxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500125.1;locus_tag=CP553_RS11450;product=bacilliredoxin BrxB;protein_id=WP_001831204.1;transl_table=11
NZ_PCFD01000047.1	RefSeq	gene	1351	2670	.	-	.	ID=gene-CP553_RS11455;Name=CP553_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11455;old_locus_tag=CP553_11860
NZ_PCFD01000047.1	Protein Homology	CDS	1351	2670	.	-	0	ID=cds-WP_002440006.1;Parent=gene-CP553_RS11455;Dbxref=GenBank:WP_002440006.1;Name=WP_002440006.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496868.1;locus_tag=CP553_RS11455;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_002440006.1;transl_table=11
NZ_PCFD01000047.1	RefSeq	gene	2683	3666	.	-	.	ID=gene-CP553_RS11460;Name=CP553_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11460;old_locus_tag=CP553_11865
NZ_PCFD01000047.1	Protein Homology	CDS	2683	3666	.	-	0	ID=cds-WP_002440009.1;Parent=gene-CP553_RS11460;Dbxref=GenBank:WP_002440009.1;Name=WP_002440009.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500127.1;locus_tag=CP553_RS11460;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_002440009.1;transl_table=11
NZ_PCFD01000047.1	RefSeq	gene	3659	4657	.	-	.	ID=gene-CP553_RS11465;Name=CP553_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11465;old_locus_tag=CP553_11870
NZ_PCFD01000047.1	Protein Homology	CDS	3659	4657	.	-	0	ID=cds-WP_116843034.1;Parent=gene-CP553_RS11465;Dbxref=GenBank:WP_116843034.1;Name=WP_116843034.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012083651.1;locus_tag=CP553_RS11465;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_116843034.1;transl_table=11
NZ_PCFD01000047.1	RefSeq	gene	4672	6093	.	-	.	ID=gene-CP553_RS11470;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=CP553_RS11470;old_locus_tag=CP553_11875
NZ_PCFD01000047.1	Protein Homology	CDS	4672	6093	.	-	0	ID=cds-WP_002440012.1;Parent=gene-CP553_RS11470;Dbxref=GenBank:WP_002440012.1;Name=WP_002440012.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830939.1;locus_tag=CP553_RS11470;product=dihydrolipoyl dehydrogenase;protein_id=WP_002440012.1;transl_table=11
NZ_PCFD01000047.1	RefSeq	gene	6353	8029	.	-	.	ID=gene-CP553_RS11475;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=CP553_RS11475;old_locus_tag=CP553_11880
NZ_PCFD01000047.1	Protein Homology	CDS	6353	8029	.	-	0	ID=cds-WP_001830981.1;Parent=gene-CP553_RS11475;Dbxref=GenBank:WP_001830981.1;Name=WP_001830981.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468404.1;locus_tag=CP553_RS11475;product=DNA repair protein RecN;protein_id=WP_001830981.1;transl_table=11
NZ_PCFD01000047.1	RefSeq	gene	8045	8497	.	-	.	ID=gene-CP553_RS11480;Name=ahrC;gbkey=Gene;gene=ahrC;gene_biotype=protein_coding;gene_synonym=argR;locus_tag=CP553_RS11480;old_locus_tag=CP553_11885
NZ_PCFD01000047.1	Protein Homology	CDS	8045	8497	.	-	0	ID=cds-WP_002456185.1;Parent=gene-CP553_RS11480;Dbxref=GenBank:WP_002456185.1;Name=WP_002456185.1;Ontology_term=GO:0006355,GO:0003700,GO:0034618;gbkey=CDS;gene=ahrC;go_function=DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500131.1;locus_tag=CP553_RS11480;product=transcriptional regulator AhrC/ArgR;protein_id=WP_002456185.1;transl_table=11
##sequence-region NZ_PCFD01000048.1 1 7077
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000048.1	RefSeq	region	1	7077	.	+	.	ID=NZ_PCFD01000048.1:1..7077;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000048.1	RefSeq	gene	1	653	.	+	.	ID=gene-CP553_RS11485;Name=CP553_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11485;old_locus_tag=CP553_11890;partial=true;start_range=.,1
NZ_PCFD01000048.1	Protein Homology	CDS	1	653	.	+	2	ID=cds-WP_086886630.1;Parent=gene-CP553_RS11485;Dbxref=GenBank:WP_086886630.1;Name=WP_086886630.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457666.1;locus_tag=CP553_RS11485;partial=true;product=DegV family protein;protein_id=WP_086886630.1;start_range=.,1;transl_table=11
NZ_PCFD01000048.1	RefSeq	gene	756	1280	.	+	.	ID=gene-CP553_RS11490;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=CP553_RS11490;old_locus_tag=CP553_11895
NZ_PCFD01000048.1	Protein Homology	CDS	756	1280	.	+	0	ID=cds-WP_002439749.1;Parent=gene-CP553_RS11490;Dbxref=GenBank:WP_002439749.1;Name=WP_002439749.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831118.1;locus_tag=CP553_RS11490;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_002439749.1;transl_table=11
NZ_PCFD01000048.1	RefSeq	gene	1277	1705	.	+	.	ID=gene-CP553_RS11495;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=CP553_RS11495;old_locus_tag=CP553_11900
NZ_PCFD01000048.1	Protein Homology	CDS	1277	1705	.	+	0	ID=cds-WP_002439748.1;Parent=gene-CP553_RS11495;Dbxref=GenBank:WP_002439748.1;Name=WP_002439748.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499956.1;locus_tag=CP553_RS11495;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_002439748.1;transl_table=11
NZ_PCFD01000048.1	RefSeq	gene	1718	2218	.	+	.	ID=gene-CP553_RS11500;Name=CP553_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11500;old_locus_tag=CP553_11905
NZ_PCFD01000048.1	Protein Homology	CDS	1718	2218	.	+	0	ID=cds-WP_001831133.1;Parent=gene-CP553_RS11500;Dbxref=GenBank:WP_001831133.1;Name=WP_001831133.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499955.1;locus_tag=CP553_RS11500;product=PTS sugar transporter subunit IIA;protein_id=WP_001831133.1;transl_table=11
NZ_PCFD01000048.1	RefSeq	gene	2218	2442	.	+	.	ID=gene-CP553_RS11505;Name=CP553_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11505;old_locus_tag=CP553_11910
NZ_PCFD01000048.1	Protein Homology	CDS	2218	2442	.	+	0	ID=cds-WP_001831241.1;Parent=gene-CP553_RS11505;Dbxref=GenBank:WP_001831241.1;Name=WP_001831241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499954.1;locus_tag=CP553_RS11505;product=YozE family protein;protein_id=WP_001831241.1;transl_table=11
NZ_PCFD01000048.1	RefSeq	gene	2787	4262	.	+	.	ID=gene-CP553_RS11510;Name=CP553_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11510;old_locus_tag=CP553_11915
NZ_PCFD01000048.1	Protein Homology	CDS	2787	4262	.	+	0	ID=cds-WP_002439742.1;Parent=gene-CP553_RS11510;Dbxref=GenBank:WP_002439742.1;Name=WP_002439742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476758.1;locus_tag=CP553_RS11510;product=S41 family peptidase;protein_id=WP_002439742.1;transl_table=11
NZ_PCFD01000048.1	RefSeq	gene	4598	5101	.	+	.	ID=gene-CP553_RS11515;Name=CP553_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11515;old_locus_tag=CP553_11925
NZ_PCFD01000048.1	Protein Homology	CDS	4598	5101	.	+	0	ID=cds-WP_001831293.1;Parent=gene-CP553_RS11515;Dbxref=GenBank:WP_001831293.1;Name=WP_001831293.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494459.1;locus_tag=CP553_RS11515;product=GNAT family N-acetyltransferase;protein_id=WP_001831293.1;transl_table=11
NZ_PCFD01000048.1	RefSeq	gene	5119	6192	.	+	.	ID=gene-CP553_RS11520;Name=CP553_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11520;old_locus_tag=CP553_11930
NZ_PCFD01000048.1	Protein Homology	CDS	5119	6192	.	+	0	ID=cds-WP_002439740.1;Parent=gene-CP553_RS11520;Dbxref=GenBank:WP_002439740.1;Name=WP_002439740.1;Ontology_term=GO:0050511;gbkey=CDS;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446436.1;locus_tag=CP553_RS11520;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_002439740.1;transl_table=11
NZ_PCFD01000048.1	RefSeq	gene	6205	6819	.	+	.	ID=gene-CP553_RS11525;Name=CP553_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11525;old_locus_tag=CP553_11935
NZ_PCFD01000048.1	Protein Homology	CDS	6205	6819	.	+	0	ID=cds-WP_002439737.1;Parent=gene-CP553_RS11525;Dbxref=GenBank:WP_002439737.1;Name=WP_002439737.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468785.1;locus_tag=CP553_RS11525;product=phosphatase PAP2 family protein;protein_id=WP_002439737.1;transl_table=11
##sequence-region NZ_PCFD01000049.1 1 6792
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000049.1	RefSeq	region	1	6792	.	+	.	ID=NZ_PCFD01000049.1:1..6792;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000049.1	RefSeq	gene	1	315	.	+	.	ID=gene-CP553_RS11530;Name=CP553_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11530;old_locus_tag=CP553_11940;partial=true;start_range=.,1
NZ_PCFD01000049.1	Protein Homology	CDS	1	315	.	+	0	ID=cds-WP_103480231.1;Parent=gene-CP553_RS11530;Dbxref=GenBank:WP_103480231.1;Name=WP_103480231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499132.1;locus_tag=CP553_RS11530;partial=true;product=hypothetical protein;protein_id=WP_103480231.1;start_range=.,1;transl_table=11
NZ_PCFD01000049.1	RefSeq	gene	508	1482	.	+	.	ID=gene-CP553_RS11535;Name=CP553_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11535;old_locus_tag=CP553_11945
NZ_PCFD01000049.1	Protein Homology	CDS	508	1482	.	+	0	ID=cds-WP_002437673.1;Parent=gene-CP553_RS11535;Dbxref=GenBank:WP_002437673.1;Name=WP_002437673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498783.1;locus_tag=CP553_RS11535;product=extracellular solute-binding protein;protein_id=WP_002437673.1;transl_table=11
NZ_PCFD01000049.1	RefSeq	gene	1479	3017	.	+	.	ID=gene-CP553_RS11540;Name=CP553_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11540;old_locus_tag=CP553_11950
NZ_PCFD01000049.1	Protein Homology	CDS	1479	3017	.	+	0	ID=cds-WP_002437672.1;Parent=gene-CP553_RS11540;Dbxref=GenBank:WP_002437672.1;Name=WP_002437672.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503012.1;locus_tag=CP553_RS11540;product=sensor histidine kinase;protein_id=WP_002437672.1;transl_table=11
NZ_PCFD01000049.1	RefSeq	gene	3029	3784	.	+	.	ID=gene-CP553_RS11545;Name=CP553_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11545;old_locus_tag=CP553_11955
NZ_PCFD01000049.1	Protein Homology	CDS	3029	3784	.	+	0	ID=cds-WP_002455962.1;Parent=gene-CP553_RS11545;Dbxref=GenBank:WP_002455962.1;Name=WP_002455962.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498781.1;locus_tag=CP553_RS11545;product=response regulator transcription factor;protein_id=WP_002455962.1;transl_table=11
NZ_PCFD01000049.1	RefSeq	gene	3863	5242	.	-	.	ID=gene-CP553_RS11550;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=CP553_RS11550;old_locus_tag=CP553_11960
NZ_PCFD01000049.1	Protein Homology	CDS	3863	5242	.	-	0	ID=cds-WP_002455961.1;Parent=gene-CP553_RS11550;Dbxref=GenBank:WP_002455961.1;Name=WP_002455961.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498780.1;locus_tag=CP553_RS11550;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_002455961.1;transl_table=11
NZ_PCFD01000049.1	RefSeq	gene	5480	5974	.	+	.	ID=gene-CP553_RS11555;Name=CP553_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11555;old_locus_tag=CP553_11965
NZ_PCFD01000049.1	Protein Homology	CDS	5480	5974	.	+	0	ID=cds-WP_002437668.1;Parent=gene-CP553_RS11555;Dbxref=GenBank:WP_002437668.1;Name=WP_002437668.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454321.1;locus_tag=CP553_RS11555;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_002437668.1;transl_table=11
NZ_PCFD01000049.1	RefSeq	pseudogene	6091	6788	.	+	.	ID=gene-CP553_RS11560;Name=CP553_RS11560;end_range=6788,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11560;partial=true;pseudo=true
NZ_PCFD01000049.1	Protein Homology	CDS	6091	6788	.	+	0	ID=cds-CP553_RS11560;Parent=gene-CP553_RS11560;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558285.1;locus_tag=CP553_RS11560;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000050.1 1 4972
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000050.1	RefSeq	region	1	4972	.	+	.	ID=NZ_PCFD01000050.1:1..4972;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000050.1	RefSeq	pseudogene	1	237	.	-	.	ID=gene-CP553_RS11565;Name=CP553_RS11565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11565;old_locus_tag=CP553_11980;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000050.1	Protein Homology	CDS	1	237	.	-	0	ID=cds-CP553_RS11565;Parent=gene-CP553_RS11565;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS11565;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000050.1	RefSeq	gene	303	1247	.	+	.	ID=gene-CP553_RS11570;Name=CP553_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11570;old_locus_tag=CP553_11985
NZ_PCFD01000050.1	Protein Homology	CDS	303	1247	.	+	0	ID=cds-WP_000277654.1;Parent=gene-CP553_RS11570;Dbxref=GenBank:WP_000277654.1;Name=WP_000277654.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000277654.1;locus_tag=CP553_RS11570;product=replication initiation factor domain-containing protein;protein_id=WP_000277654.1;transl_table=11
NZ_PCFD01000050.1	RefSeq	gene	1409	2788	.	+	.	ID=gene-CP553_RS11575;Name=tet(K);gbkey=Gene;gene=tet(K);gene_biotype=protein_coding;locus_tag=CP553_RS11575;old_locus_tag=CP553_11990
NZ_PCFD01000050.1	Protein Homology	CDS	1409	2788	.	+	0	ID=cds-WP_002455970.1;Parent=gene-CP553_RS11575;Dbxref=GenBank:WP_002455970.1;Name=WP_002455970.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(K);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492283.1;locus_tag=CP553_RS11575;product=tetracycline efflux MFS transporter Tet(K);protein_id=WP_002455970.1;transl_table=11
NZ_PCFD01000050.1	RefSeq	gene	2978	4219	.	+	.	ID=gene-CP553_RS11580;Name=mobV;gbkey=Gene;gene=mobV;gene_biotype=protein_coding;locus_tag=CP553_RS11580;old_locus_tag=CP553_11995
NZ_PCFD01000050.1	Protein Homology	CDS	2978	4219	.	+	0	ID=cds-WP_002455971.1;Parent=gene-CP553_RS11580;Dbxref=GenBank:WP_002455971.1;Name=WP_002455971.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010889940.1;locus_tag=CP553_RS11580;product=MobV family relaxase;protein_id=WP_002455971.1;transl_table=11
NZ_PCFD01000050.1	RefSeq	gene	4752	4972	.	-	.	ID=gene-CP553_RS11585;Name=CP553_RS11585;end_range=4972,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11585;old_locus_tag=CP553_12000;partial=true
NZ_PCFD01000050.1	Protein Homology	CDS	4752	4972	.	-	2	ID=cds-WP_133062770.1-2;Parent=gene-CP553_RS11585;Dbxref=GenBank:WP_133062770.1;Name=WP_133062770.1;end_range=4972,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS11585;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_133062770.1;transl_table=11
##sequence-region NZ_PCFD01000051.1 1 4947
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000051.1	RefSeq	region	1	4947	.	+	.	ID=NZ_PCFD01000051.1:1..4947;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000051.1	RefSeq	gene	1	1049	.	+	.	ID=gene-CP553_RS11590;Name=mobV;gbkey=Gene;gene=mobV;gene_biotype=protein_coding;locus_tag=CP553_RS11590;old_locus_tag=CP553_12005;partial=true;start_range=.,1
NZ_PCFD01000051.1	Protein Homology	CDS	1	1049	.	+	2	ID=cds-WP_116843035.1;Parent=gene-CP553_RS11590;Dbxref=GenBank:WP_116843035.1;Name=WP_116843035.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010889940.1;locus_tag=CP553_RS11590;partial=true;product=MobV family relaxase;protein_id=WP_116843035.1;start_range=.,1;transl_table=11
NZ_PCFD01000051.1	RefSeq	gene	1437	1604	.	+	.	ID=gene-CP553_RS11595;Name=CP553_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11595
NZ_PCFD01000051.1	Protein Homology	CDS	1437	1604	.	+	0	ID=cds-WP_165798629.1;Parent=gene-CP553_RS11595;Dbxref=GenBank:WP_165798629.1;Name=WP_165798629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835937.1;locus_tag=CP553_RS11595;product=hypothetical protein;protein_id=WP_165798629.1;transl_table=11
NZ_PCFD01000051.1	RefSeq	gene	1659	2261	.	+	.	ID=gene-CP553_RS11600;Name=CP553_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11600;old_locus_tag=CP553_12010
NZ_PCFD01000051.1	Protein Homology	CDS	1659	2261	.	+	0	ID=cds-WP_231647063.1;Parent=gene-CP553_RS11600;Dbxref=GenBank:WP_231647063.1;Name=WP_231647063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486348.1;locus_tag=CP553_RS11600;product=replication protein;protein_id=WP_231647063.1;transl_table=11
NZ_PCFD01000051.1	RefSeq	gene	2929	3405	.	-	.	ID=gene-CP553_RS11605;Name=CP553_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11605;old_locus_tag=CP553_12015
NZ_PCFD01000051.1	Protein Homology	CDS	2929	3405	.	-	0	ID=cds-WP_000664727.1;Parent=gene-CP553_RS11605;Dbxref=GenBank:WP_000664727.1;Name=WP_000664727.1;Ontology_term=GO:0006260,GO:0006276;gbkey=CDS;go_process=DNA replication|0006260||IEA,plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000664728.1;locus_tag=CP553_RS11605;product=replication/maintenance protein RepL;protein_id=WP_000664727.1;transl_table=11
NZ_PCFD01000051.1	RefSeq	gene	3853	4587	.	-	.	ID=gene-CP553_RS11610;Name=erm(C);gbkey=Gene;gene=erm(C);gene_biotype=protein_coding;locus_tag=CP553_RS11610;old_locus_tag=CP553_12020
NZ_PCFD01000051.1	Protein Homology	CDS	3853	4587	.	-	0	ID=cds-WP_001003263.1;Parent=gene-CP553_RS11610;Dbxref=GenBank:WP_001003263.1;Name=WP_001003263.1;gbkey=CDS;gene=erm(C);inference=COORDINATES: similar to AA sequence:RefSeq:WP_011282421.1;locus_tag=CP553_RS11610;product=23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(C);protein_id=WP_001003263.1;transl_table=11
##sequence-region NZ_PCFD01000052.1 1 4212
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000052.1	RefSeq	region	1	4212	.	+	.	ID=NZ_PCFD01000052.1:1..4212;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000052.1	RefSeq	gene	296	1018	.	+	.	ID=gene-CP553_RS11615;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=CP553_RS11615;old_locus_tag=CP553_12025
NZ_PCFD01000052.1	Protein Homology	CDS	296	1018	.	+	0	ID=cds-WP_001829308.1;Parent=gene-CP553_RS11615;Dbxref=GenBank:WP_001829308.1;Name=WP_001829308.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499488.1;locus_tag=CP553_RS11615;product=adaptor protein MecA;protein_id=WP_001829308.1;transl_table=11
NZ_PCFD01000052.1	RefSeq	gene	1114	2094	.	+	.	ID=gene-CP553_RS11620;Name=CP553_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11620;old_locus_tag=CP553_12030
NZ_PCFD01000052.1	Protein Homology	CDS	1114	2094	.	+	0	ID=cds-WP_165798630.1;Parent=gene-CP553_RS11620;Dbxref=GenBank:WP_165798630.1;Name=WP_165798630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113780.1;locus_tag=CP553_RS11620;product=competence protein CoiA;protein_id=WP_165798630.1;transl_table=11
NZ_PCFD01000052.1	RefSeq	gene	2145	3953	.	+	.	ID=gene-CP553_RS11625;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=CP553_RS11625;old_locus_tag=CP553_12035
NZ_PCFD01000052.1	Protein Homology	CDS	2145	3953	.	+	0	ID=cds-WP_001829279.1;Parent=gene-CP553_RS11625;Dbxref=GenBank:WP_001829279.1;Name=WP_001829279.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476530.1;locus_tag=CP553_RS11625;product=oligoendopeptidase F;protein_id=WP_001829279.1;transl_table=11
##sequence-region NZ_PCFD01000053.1 1 4059
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000053.1	RefSeq	region	1	4059	.	+	.	ID=NZ_PCFD01000053.1:1..4059;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000053.1	RefSeq	gene	337	1044	.	+	.	ID=gene-CP553_RS11630;Name=CP553_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11630;old_locus_tag=CP553_12040
NZ_PCFD01000053.1	Protein Homology	CDS	337	1044	.	+	0	ID=cds-WP_002438072.1;Parent=gene-CP553_RS11630;Dbxref=GenBank:WP_002438072.1;Name=WP_002438072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447068.1;locus_tag=CP553_RS11630;product=transglycosylase family protein;protein_id=WP_002438072.1;transl_table=11
NZ_PCFD01000053.1	RefSeq	gene	1549	3357	.	+	.	ID=gene-CP553_RS11635;Name=CP553_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11635;old_locus_tag=CP553_12045
NZ_PCFD01000053.1	Protein Homology	CDS	1549	3357	.	+	0	ID=cds-WP_002438073.1;Parent=gene-CP553_RS11635;Dbxref=GenBank:WP_002438073.1;Name=WP_002438073.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505413.1;locus_tag=CP553_RS11635;product=acyltransferase family protein;protein_id=WP_002438073.1;transl_table=11
NZ_PCFD01000053.1	RefSeq	pseudogene	3956	4059	.	+	.	ID=gene-CP553_RS12855;Name=CP553_RS12855;end_range=4059,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12855;partial=true;pseudo=true
NZ_PCFD01000053.1	Protein Homology	CDS	3956	4059	.	+	0	ID=cds-CP553_RS12855;Parent=gene-CP553_RS12855;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4059,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501337.1;locus_tag=CP553_RS12855;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000054.1 1 3554
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000054.1	RefSeq	region	1	3554	.	+	.	ID=NZ_PCFD01000054.1:1..3554;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000054.1	RefSeq	gene	283	840	.	-	.	ID=gene-CP553_RS11640;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=CP553_RS11640;old_locus_tag=CP553_12050
NZ_PCFD01000054.1	Protein Homology	CDS	283	840	.	-	0	ID=cds-WP_011082818.1;Parent=gene-CP553_RS11640;Dbxref=GenBank:WP_011082818.1;Name=WP_011082818.1;Ontology_term=GO:0042823,GO:0004359,GO:0016884;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082818.1;locus_tag=CP553_RS11640;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_011082818.1;transl_table=11
NZ_PCFD01000054.1	RefSeq	gene	843	1730	.	-	.	ID=gene-CP553_RS11645;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=CP553_RS11645;old_locus_tag=CP553_12055
NZ_PCFD01000054.1	Protein Homology	CDS	843	1730	.	-	0	ID=cds-WP_002438655.1;Parent=gene-CP553_RS11645;Dbxref=GenBank:WP_002438655.1;Name=WP_002438655.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=CP553_RS11645;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_002438655.1;transl_table=11
NZ_PCFD01000054.1	RefSeq	gene	1827	3191	.	+	.	ID=gene-CP553_RS11650;Name=CP553_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11650;old_locus_tag=CP553_12060
NZ_PCFD01000054.1	Protein Homology	CDS	1827	3191	.	+	0	ID=cds-WP_002438651.1;Parent=gene-CP553_RS11650;Dbxref=GenBank:WP_002438651.1;Name=WP_002438651.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456025.1;locus_tag=CP553_RS11650;product=PLP-dependent aminotransferase family protein;protein_id=WP_002438651.1;transl_table=11
NZ_PCFD01000054.1	RefSeq	gene	3431	3545	.	-	.	ID=gene-CP553_RS11655;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CP553_RS11655;old_locus_tag=CP553_12065
NZ_PCFD01000054.1	cmsearch	rRNA	3431	3545	.	-	.	ID=rna-CP553_RS11655;Parent=gene-CP553_RS11655;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11655;product=5S ribosomal RNA
NZ_PCFD01000054.1	cmsearch	exon	3431	3545	.	-	.	ID=exon-CP553_RS11655-1;Parent=rna-CP553_RS11655;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11655;product=5S ribosomal RNA
##sequence-region NZ_PCFD01000055.1 1 3125
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000055.1	RefSeq	region	1	3125	.	+	.	ID=NZ_PCFD01000055.1:1..3125;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000055.1	RefSeq	gene	945	1949	.	-	.	ID=gene-CP553_RS11660;Name=CP553_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11660;old_locus_tag=CP553_12070
NZ_PCFD01000055.1	Protein Homology	CDS	945	1949	.	-	0	ID=cds-WP_001199880.1;Parent=gene-CP553_RS11660;Dbxref=GenBank:WP_001199880.1;Name=WP_001199880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368559.1;locus_tag=CP553_RS11660;product=protein rep;protein_id=WP_001199880.1;transl_table=11
NZ_PCFD01000055.1	RefSeq	gene	2132	2953	.	-	.	ID=gene-CP553_RS11665;Name=CP553_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11665;old_locus_tag=CP553_12075
NZ_PCFD01000055.1	Protein Homology	CDS	2132	2953	.	-	0	ID=cds-WP_049948317.1;Parent=gene-CP553_RS11665;Dbxref=GenBank:WP_049948317.1;Name=WP_049948317.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025217.6;locus_tag=CP553_RS11665;product=putative RNA methyltransferase;protein_id=WP_049948317.1;transl_table=11
##sequence-region NZ_PCFD01000056.1 1 2821
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000056.1	RefSeq	region	1	2821	.	+	.	ID=NZ_PCFD01000056.1:1..2821;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000056.1	RefSeq	pseudogene	128	763	.	-	.	ID=gene-CP553_RS11670;Name=CP553_RS11670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11670;old_locus_tag=CP553_12080;partial=true;pseudo=true;start_range=.,128
NZ_PCFD01000056.1	Protein Homology	CDS	128	763	.	-	0	ID=cds-CP553_RS11670;Parent=gene-CP553_RS11670;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368559.1;locus_tag=CP553_RS11670;partial=true;product=protein rep;pseudo=true;start_range=.,128;transl_table=11
NZ_PCFD01000056.1	RefSeq	gene	982	1467	.	+	.	ID=gene-CP553_RS11675;Name=lnu(A);gbkey=Gene;gene=lnu(A);gene_biotype=protein_coding;locus_tag=CP553_RS11675;old_locus_tag=CP553_12085
NZ_PCFD01000056.1	Protein Homology	CDS	982	1467	.	+	0	ID=cds-WP_011645010.1;Parent=gene-CP553_RS11675;Dbxref=GenBank:WP_011645010.1;Name=WP_011645010.1;gbkey=CDS;gene=lnu(A);inference=COORDINATES: similar to AA sequence:RefSeq:WP_011645015.1;locus_tag=CP553_RS11675;product=lincosamide nucleotidyltransferase Lnu(A);protein_id=WP_011645010.1;transl_table=11
NZ_PCFD01000056.1	RefSeq	pseudogene	2318	2695	.	-	.	ID=gene-CP553_RS11680;Name=CP553_RS11680;end_range=2695,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11680;old_locus_tag=CP553_12090;partial=true;pseudo=true
NZ_PCFD01000056.1	Protein Homology	CDS	2318	2695	.	-	0	ID=cds-CP553_RS11680;Parent=gene-CP553_RS11680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006260,GO:0003677;end_range=2695,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568503.1;locus_tag=CP553_RS11680;partial=true;product=protein rep;pseudo=true;transl_table=11
NZ_PCFD01000056.1	RefSeq	pseudogene	2751	2821	.	+	.	ID=gene-CP553_RS11685;Name=CP553_RS11685;end_range=2821,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11685;partial=true;pseudo=true
NZ_PCFD01000056.1	Protein Homology	CDS	2751	2821	.	+	0	ID=cds-CP553_RS11685;Parent=gene-CP553_RS11685;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2821,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS11685;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000057.1 1 2658
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000057.1	RefSeq	region	1	2658	.	+	.	ID=NZ_PCFD01000057.1:1..2658;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000057.1	RefSeq	pseudogene	1	71	.	-	.	ID=gene-CP553_RS11690;Name=CP553_RS11690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11690;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000057.1	Protein Homology	CDS	1	71	.	-	0	ID=cds-CP553_RS11690;Parent=gene-CP553_RS11690;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS11690;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000057.1	RefSeq	gene	101	331	.	-	.	ID=gene-CP553_RS11695;Name=CP553_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11695;old_locus_tag=CP553_12095
NZ_PCFD01000057.1	Protein Homology	CDS	101	331	.	-	0	ID=cds-WP_000956386.1;Parent=gene-CP553_RS11695;Dbxref=GenBank:WP_000956386.1;Name=WP_000956386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466719.1;locus_tag=CP553_RS11695;product=hypothetical protein;protein_id=WP_000956386.1;transl_table=11
NZ_PCFD01000057.1	RefSeq	gene	639	962	.	+	.	ID=gene-CP553_RS11700;Name=qacC;gbkey=Gene;gene=qacC;gene_biotype=protein_coding;locus_tag=CP553_RS11700;old_locus_tag=CP553_12100
NZ_PCFD01000057.1	Protein Homology	CDS	639	962	.	+	0	ID=cds-WP_001146389.1;Parent=gene-CP553_RS11700;Dbxref=GenBank:WP_001146389.1;Name=WP_001146389.1;gbkey=CDS;gene=qacC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001146389.1;locus_tag=CP553_RS11700;product=quaternary ammonium compound efflux SMR transporter QacC;protein_id=WP_001146389.1;transl_table=11
NZ_PCFD01000057.1	RefSeq	gene	1180	1401	.	+	.	ID=gene-CP553_RS11705;Name=CP553_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11705;old_locus_tag=CP553_12105
NZ_PCFD01000057.1	Protein Homology	CDS	1180	1401	.	+	0	ID=cds-WP_000799767.1;Parent=gene-CP553_RS11705;Dbxref=GenBank:WP_000799767.1;Name=WP_000799767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001819500.1;locus_tag=CP553_RS11705;product=hypothetical protein;protein_id=WP_000799767.1;transl_table=11
NZ_PCFD01000057.1	RefSeq	pseudogene	1934	2536	.	-	.	ID=gene-CP553_RS11710;Name=CP553_RS11710;end_range=2536,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11710;old_locus_tag=CP553_12110;partial=true;pseudo=true
NZ_PCFD01000057.1	Protein Homology	CDS	1934	2536	.	-	0	ID=cds-CP553_RS11710;Parent=gene-CP553_RS11710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006260,GO:0003677;end_range=2536,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011109600.1;locus_tag=CP553_RS11710;partial=true;product=protein rep;pseudo=true;transl_table=11
NZ_PCFD01000057.1	RefSeq	pseudogene	2588	2658	.	+	.	ID=gene-CP553_RS11715;Name=CP553_RS11715;end_range=2658,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11715;partial=true;pseudo=true
NZ_PCFD01000057.1	Protein Homology	CDS	2588	2658	.	+	0	ID=cds-CP553_RS11715;Parent=gene-CP553_RS11715;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2658,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS11715;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000058.1 1 2302
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000058.1	RefSeq	region	1	2302	.	+	.	ID=NZ_PCFD01000058.1:1..2302;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000058.1	RefSeq	gene	21	365	.	-	.	ID=gene-CP553_RS11720;Name=CP553_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11720;old_locus_tag=CP553_12115
NZ_PCFD01000058.1	Protein Homology	CDS	21	365	.	-	0	ID=cds-WP_002438947.1;Parent=gene-CP553_RS11720;Dbxref=GenBank:WP_002438947.1;Name=WP_002438947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832602.1;locus_tag=CP553_RS11720;product=DUF4260 domain-containing protein;protein_id=WP_002438947.1;transl_table=11
NZ_PCFD01000058.1	RefSeq	gene	591	1898	.	+	.	ID=gene-CP553_RS11725;Name=CP553_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11725;old_locus_tag=CP553_12125
NZ_PCFD01000058.1	Protein Homology	CDS	591	1898	.	+	0	ID=cds-WP_116843039.1;Parent=gene-CP553_RS11725;Dbxref=GenBank:WP_116843039.1;Name=WP_116843039.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832616.1;locus_tag=CP553_RS11725;product=TrkH family potassium uptake protein;protein_id=WP_116843039.1;transl_table=11
##sequence-region NZ_PCFD01000059.1 1 1918
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000059.1	RefSeq	region	1	1918	.	+	.	ID=NZ_PCFD01000059.1:1..1918;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000059.1	RefSeq	gene	80	1519	.	-	.	ID=gene-CP553_RS11730;Name=CP553_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11730;old_locus_tag=CP553_12130
NZ_PCFD01000059.1	Protein Homology	CDS	80	1519	.	-	0	ID=cds-WP_001028144.1;Parent=gene-CP553_RS11730;Dbxref=GenBank:WP_001028144.1;Name=WP_001028144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002390775.1;locus_tag=CP553_RS11730;product=bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia;protein_id=WP_001028144.1;transl_table=11
NZ_PCFD01000059.1	RefSeq	gene	1520	1918	.	-	.	ID=gene-CP553_RS11735;Name=CP553_RS11735;end_range=1918,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11735;old_locus_tag=CP553_12135;partial=true
NZ_PCFD01000059.1	Protein Homology	CDS	1520	1918	.	-	0	ID=cds-WP_438944513.1;Parent=gene-CP553_RS11735;Dbxref=GenBank:WP_438944513.1;Name=WP_438944513.1;Ontology_term=GO:0008080,GO:0016746;end_range=1918,.;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF025054.6;locus_tag=CP553_RS11735;partial=true;product=GNAT family N-acetyltransferase;protein_id=WP_438944513.1;transl_table=11
##sequence-region NZ_PCFD01000060.1 1 1843
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000060.1	RefSeq	region	1	1843	.	+	.	ID=NZ_PCFD01000060.1:1..1843;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000060.1	RefSeq	gene	28	984	.	+	.	ID=gene-CP553_RS11740;Name=CP553_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11740;old_locus_tag=CP553_12140
NZ_PCFD01000060.1	Protein Homology	CDS	28	984	.	+	0	ID=cds-WP_000282655.1;Parent=gene-CP553_RS11740;Dbxref=GenBank:WP_000282655.1;Name=WP_000282655.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499960.1;locus_tag=CP553_RS11740;product=thymidylate synthase;protein_id=WP_000282655.1;transl_table=11
NZ_PCFD01000060.1	RefSeq	gene	1026	1511	.	+	.	ID=gene-CP553_RS11745;Name=CP553_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11745;old_locus_tag=CP553_12145
NZ_PCFD01000060.1	Protein Homology	CDS	1026	1511	.	+	0	ID=cds-WP_000175735.1;Parent=gene-CP553_RS11745;Dbxref=GenBank:WP_000175735.1;Name=WP_000175735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830952.1;locus_tag=CP553_RS11745;product=trimethoprim-resistant dihydrofolate reductase DfrS1;protein_id=WP_000175735.1;transl_table=11
NZ_PCFD01000060.1	RefSeq	gene	1521	1843	.	+	.	ID=gene-CP553_RS11750;Name=CP553_RS11750;end_range=1843,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11750;old_locus_tag=CP553_12150;partial=true
NZ_PCFD01000060.1	Protein Homology	CDS	1521	1843	.	+	0	ID=cds-WP_002484573.1;Parent=gene-CP553_RS11750;Dbxref=GenBank:WP_002484573.1;Name=WP_002484573.1;end_range=1843,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499958.1;locus_tag=CP553_RS11750;partial=true;product=DegV family protein;protein_id=WP_002484573.1;transl_table=11
##sequence-region NZ_PCFD01000061.1 1 1532
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000061.1	RefSeq	region	1	1532	.	+	.	ID=NZ_PCFD01000061.1:1..1532;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000061.1	RefSeq	gene	1	690	.	-	.	ID=gene-CP553_RS11755;Name=CP553_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11755;old_locus_tag=CP553_12155;partial=true;start_range=.,1
NZ_PCFD01000061.1	Protein Homology	CDS	1	690	.	-	0	ID=cds-WP_133230788.1;Parent=gene-CP553_RS11755;Dbxref=GenBank:WP_133230788.1;Name=WP_133230788.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500167.1;locus_tag=CP553_RS11755;partial=true;product=metal ABC transporter permease;protein_id=WP_133230788.1;start_range=.,1;transl_table=11
NZ_PCFD01000061.1	RefSeq	pseudogene	724	1522	.	-	.	ID=gene-CP553_RS11760;Name=CP553_RS11760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11760;old_locus_tag=CP553_12160;pseudo=true
NZ_PCFD01000061.1	Protein Homology	CDS	724	1522	.	-	0	ID=cds-CP553_RS11760;Parent=gene-CP553_RS11760;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500168.1;locus_tag=CP553_RS11760;product=metal ABC transporter ATP-binding protein;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000062.1 1 1494
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000062.1	RefSeq	region	1	1494	.	+	.	ID=NZ_PCFD01000062.1:1..1494;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000062.1	RefSeq	pseudogene	1	247	.	-	.	ID=gene-CP553_RS11765;Name=CP553_RS11765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11765;old_locus_tag=CP553_12165;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000062.1	Protein Homology	CDS	1	247	.	-	0	ID=cds-CP553_RS11765;Parent=gene-CP553_RS11765;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS11765;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000062.1	RefSeq	gene	412	507	.	+	.	ID=gene-CP553_RS11770;Name=CP553_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11770
NZ_PCFD01000062.1	Protein Homology	CDS	412	507	.	+	0	ID=cds-WP_000889978.1;Parent=gene-CP553_RS11770;Dbxref=GenBank:WP_000889978.1;Name=WP_000889978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889978.1;locus_tag=CP553_RS11770;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_000889978.1;transl_table=11
NZ_PCFD01000062.1	RefSeq	gene	778	1452	.	+	.	ID=gene-CP553_RS11775;Name=CP553_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11775;old_locus_tag=CP553_12170
NZ_PCFD01000062.1	Protein Homology	CDS	778	1452	.	+	0	ID=cds-WP_001106006.1;Parent=gene-CP553_RS11775;Dbxref=GenBank:WP_001106006.1;Name=WP_001106006.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS11775;product=IS6-like element IS257 family transposase;protein_id=WP_001106006.1;transl_table=11
##sequence-region NZ_PCFD01000063.1 1 1490
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000063.1	RefSeq	region	1	1490	.	+	.	ID=NZ_PCFD01000063.1:1..1490;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000063.1	RefSeq	gene	1	511	.	+	.	ID=gene-CP553_RS11780;Name=CP553_RS11780;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS11780;old_locus_tag=CP553_12175;partial=true;start_range=.,1
NZ_PCFD01000063.1	cmsearch	rRNA	1	511	.	+	.	ID=rna-CP553_RS11780;Parent=gene-CP553_RS11780;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11780;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000063.1	cmsearch	exon	1	511	.	+	.	ID=exon-CP553_RS11780-1;Parent=rna-CP553_RS11780;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11780;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000063.1	RefSeq	gene	606	682	.	+	.	ID=gene-CP553_RS11785;Name=CP553_RS11785;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS11785;old_locus_tag=CP553_12180
NZ_PCFD01000063.1	tRNAscan-SE	tRNA	606	682	.	+	.	ID=rna-CP553_RS11785;Parent=gene-CP553_RS11785;anticodon=(pos:640..642);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS11785;product=tRNA-Ile
NZ_PCFD01000063.1	tRNAscan-SE	exon	606	682	.	+	.	ID=exon-CP553_RS11785-1;Parent=rna-CP553_RS11785;anticodon=(pos:640..642);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS11785;product=tRNA-Ile
NZ_PCFD01000063.1	RefSeq	gene	703	778	.	+	.	ID=gene-CP553_RS11790;Name=CP553_RS11790;gbkey=Gene;gene_biotype=tRNA;locus_tag=CP553_RS11790;old_locus_tag=CP553_12185
NZ_PCFD01000063.1	tRNAscan-SE	tRNA	703	778	.	+	.	ID=rna-CP553_RS11790;Parent=gene-CP553_RS11790;anticodon=(pos:736..738);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS11790;product=tRNA-Ala
NZ_PCFD01000063.1	tRNAscan-SE	exon	703	778	.	+	.	ID=exon-CP553_RS11790-1;Parent=rna-CP553_RS11790;anticodon=(pos:736..738);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=CP553_RS11790;product=tRNA-Ala
NZ_PCFD01000063.1	RefSeq	gene	964	1490	.	+	.	ID=gene-CP553_RS11795;Name=CP553_RS11795;end_range=1490,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS11795;old_locus_tag=CP553_12190;partial=true
NZ_PCFD01000063.1	cmsearch	rRNA	964	1490	.	+	.	ID=rna-CP553_RS11795;Parent=gene-CP553_RS11795;Dbxref=RFAM:RF02541;end_range=1490,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11795;partial=true;product=23S ribosomal RNA
NZ_PCFD01000063.1	cmsearch	exon	964	1490	.	+	.	ID=exon-CP553_RS11795-1;Parent=rna-CP553_RS11795;Dbxref=RFAM:RF02541;end_range=1490,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11795;partial=true;product=23S ribosomal RNA
##sequence-region NZ_PCFD01000064.1 1 1487
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000064.1	RefSeq	region	1	1487	.	+	.	ID=NZ_PCFD01000064.1:1..1487;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000064.1	RefSeq	pseudogene	278	1480	.	-	.	ID=gene-CP553_RS11800;Name=CP553_RS11800;end_range=1480,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11800;old_locus_tag=CP553_12195;partial=true;pseudo=true
NZ_PCFD01000064.1	Protein Homology	CDS	278	1480	.	-	0	ID=cds-CP553_RS11800;Parent=gene-CP553_RS11800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1480,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498616.1;locus_tag=CP553_RS11800;partial=true;product=histidine ammonia-lyase;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000065.1 1 1471
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000065.1	RefSeq	region	1	1471	.	+	.	ID=NZ_PCFD01000065.1:1..1471;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000065.1	RefSeq	gene	19	1218	.	-	.	ID=gene-CP553_RS11805;Name=CP553_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11805;old_locus_tag=CP553_12200
NZ_PCFD01000065.1	Protein Homology	CDS	19	1218	.	-	0	ID=cds-WP_071813246.1;Parent=gene-CP553_RS11805;Dbxref=GenBank:WP_071813246.1;Name=WP_071813246.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071813258.1;locus_tag=CP553_RS11805;product=IS110-like element ISSep2 family transposase;protein_id=WP_071813246.1;transl_table=11
##sequence-region NZ_PCFD01000066.1 1 1434
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000066.1	RefSeq	region	1	1434	.	+	.	ID=NZ_PCFD01000066.1:1..1434;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000066.1	RefSeq	gene	1	511	.	+	.	ID=gene-CP553_RS11810;Name=CP553_RS11810;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS11810;old_locus_tag=CP553_12205;partial=true;start_range=.,1
NZ_PCFD01000066.1	cmsearch	rRNA	1	511	.	+	.	ID=rna-CP553_RS11810;Parent=gene-CP553_RS11810;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11810;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000066.1	cmsearch	exon	1	511	.	+	.	ID=exon-CP553_RS11810-1;Parent=rna-CP553_RS11810;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11810;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000066.1	RefSeq	gene	777	1434	.	+	.	ID=gene-CP553_RS11815;Name=CP553_RS11815;end_range=1434,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS11815;old_locus_tag=CP553_12210;partial=true
NZ_PCFD01000066.1	cmsearch	rRNA	777	1434	.	+	.	ID=rna-CP553_RS11815;Parent=gene-CP553_RS11815;Dbxref=RFAM:RF02541;end_range=1434,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11815;partial=true;product=23S ribosomal RNA
NZ_PCFD01000066.1	cmsearch	exon	777	1434	.	+	.	ID=exon-CP553_RS11815-1;Parent=rna-CP553_RS11815;Dbxref=RFAM:RF02541;end_range=1434,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11815;partial=true;product=23S ribosomal RNA
##sequence-region NZ_PCFD01000067.1 1 1302
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000067.1	RefSeq	region	1	1302	.	+	.	ID=NZ_PCFD01000067.1:1..1302;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000067.1	RefSeq	gene	1	511	.	+	.	ID=gene-CP553_RS11820;Name=CP553_RS11820;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS11820;old_locus_tag=CP553_12215;partial=true;start_range=.,1
NZ_PCFD01000067.1	cmsearch	rRNA	1	511	.	+	.	ID=rna-CP553_RS11820;Parent=gene-CP553_RS11820;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11820;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000067.1	cmsearch	exon	1	511	.	+	.	ID=exon-CP553_RS11820-1;Parent=rna-CP553_RS11820;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11820;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000067.1	RefSeq	gene	776	1302	.	+	.	ID=gene-CP553_RS11825;Name=CP553_RS11825;end_range=1302,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS11825;partial=true
NZ_PCFD01000067.1	cmsearch	rRNA	776	1302	.	+	.	ID=rna-CP553_RS11825;Parent=gene-CP553_RS11825;Dbxref=RFAM:RF02541;end_range=1302,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11825;partial=true;product=23S ribosomal RNA
NZ_PCFD01000067.1	cmsearch	exon	776	1302	.	+	.	ID=exon-CP553_RS11825-1;Parent=rna-CP553_RS11825;Dbxref=RFAM:RF02541;end_range=1302,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11825;partial=true;product=23S ribosomal RNA
##sequence-region NZ_PCFD01000068.1 1 1235
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000068.1	RefSeq	region	1	1235	.	+	.	ID=NZ_PCFD01000068.1:1..1235;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000068.1	RefSeq	gene	3	117	.	-	.	ID=gene-CP553_RS11830;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CP553_RS11830;old_locus_tag=CP553_12220
NZ_PCFD01000068.1	cmsearch	rRNA	3	117	.	-	.	ID=rna-CP553_RS11830;Parent=gene-CP553_RS11830;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11830;product=5S ribosomal RNA
NZ_PCFD01000068.1	cmsearch	exon	3	117	.	-	.	ID=exon-CP553_RS11830-1;Parent=rna-CP553_RS11830;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11830;product=5S ribosomal RNA
NZ_PCFD01000068.1	RefSeq	gene	188	1235	.	-	.	ID=gene-CP553_RS11835;Name=CP553_RS11835;end_range=1235,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS11835;old_locus_tag=CP553_12225;partial=true
NZ_PCFD01000068.1	cmsearch	rRNA	188	1235	.	-	.	ID=rna-CP553_RS11835;Parent=gene-CP553_RS11835;Dbxref=RFAM:RF02541;end_range=1235,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11835;partial=true;product=23S ribosomal RNA
NZ_PCFD01000068.1	cmsearch	exon	188	1235	.	-	.	ID=exon-CP553_RS11835-1;Parent=rna-CP553_RS11835;Dbxref=RFAM:RF02541;end_range=1235,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11835;partial=true;product=23S ribosomal RNA
##sequence-region NZ_PCFD01000069.1 1 1134
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000069.1	RefSeq	region	1	1134	.	+	.	ID=NZ_PCFD01000069.1:1..1134;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000069.1	RefSeq	pseudogene	1	269	.	+	.	ID=gene-CP553_RS12925;Name=CP553_RS12925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12925;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000069.1	GeneMarkS-2+	CDS	1	269	.	+	2	ID=cds-CP553_RS12925;Parent=gene-CP553_RS12925;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS12925;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000069.1	RefSeq	gene	393	833	.	+	.	ID=gene-CP553_RS12930;Name=CP553_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12930
NZ_PCFD01000069.1	GeneMarkS-2+	CDS	393	833	.	+	0	ID=cds-WP_269436765.1;Parent=gene-CP553_RS12930;Dbxref=GenBank:WP_269436765.1;Name=WP_269436765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS12930;product=hypothetical protein;protein_id=WP_269436765.1;transl_table=11
NZ_PCFD01000069.1	RefSeq	pseudogene	867	1134	.	+	.	ID=gene-CP553_RS12935;Name=CP553_RS12935;end_range=1134,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12935;partial=true;pseudo=true
NZ_PCFD01000069.1	GeneMarkS-2+	CDS	867	1134	.	+	0	ID=cds-CP553_RS12935;Parent=gene-CP553_RS12935;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1134,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS12935;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000070.1 1 1113
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000070.1	RefSeq	region	1	1113	.	+	.	ID=NZ_PCFD01000070.1:1..1113;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000071.1 1 1110
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000071.1	RefSeq	region	1	1110	.	+	.	ID=NZ_PCFD01000071.1:1..1110;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000071.1	RefSeq	gene	1	1110	.	-	.	ID=gene-CP553_RS11850;Name=CP553_RS11850;end_range=1110,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS11850;old_locus_tag=CP553_12240;partial=true;start_range=.,1
NZ_PCFD01000071.1	cmsearch	rRNA	1	1110	.	-	.	ID=rna-CP553_RS11850;Parent=gene-CP553_RS11850;Dbxref=RFAM:RF02541;end_range=1110,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11850;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_PCFD01000071.1	cmsearch	exon	1	1110	.	-	.	ID=exon-CP553_RS11850-1;Parent=rna-CP553_RS11850;Dbxref=RFAM:RF02541;end_range=1110,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11850;partial=true;product=23S ribosomal RNA;start_range=.,1
##sequence-region NZ_PCFD01000072.1 1 1082
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000072.1	RefSeq	region	1	1082	.	+	.	ID=NZ_PCFD01000072.1:1..1082;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000072.1	RefSeq	gene	1	1082	.	-	.	ID=gene-CP553_RS11855;Name=CP553_RS11855;end_range=1082,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11855;old_locus_tag=CP553_12245;partial=true;start_range=.,1
NZ_PCFD01000072.1	Protein Homology	CDS	1	1082	.	-	1	ID=cds-WP_133230793.1;Parent=gene-CP553_RS11855;Dbxref=GenBank:WP_133230793.1;Name=WP_133230793.1;Ontology_term=GO:0016787;end_range=1082,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498768.1;locus_tag=CP553_RS11855;partial=true;product=gamma-glutamyltransferase family protein;protein_id=WP_133230793.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000073.1 1 1070
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000073.1	RefSeq	region	1	1070	.	+	.	ID=NZ_PCFD01000073.1:1..1070;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000073.1	RefSeq	gene	43	1041	.	-	.	ID=gene-CP553_RS11860;Name=CP553_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11860;old_locus_tag=CP553_12250
NZ_PCFD01000073.1	Protein Homology	CDS	43	1041	.	-	0	ID=cds-WP_094659672.1;Parent=gene-CP553_RS11860;Dbxref=GenBank:WP_094659672.1;Name=WP_094659672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199881.1;locus_tag=CP553_RS11860;product=protein rep;protein_id=WP_094659672.1;transl_table=11
##sequence-region NZ_PCFD01000074.1 1 1060
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000074.1	RefSeq	region	1	1060	.	+	.	ID=NZ_PCFD01000074.1:1..1060;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000074.1	RefSeq	gene	1	1060	.	+	.	ID=gene-CP553_RS11865;Name=CP553_RS11865;end_range=1060,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11865;old_locus_tag=CP553_12255;partial=true;start_range=.,1
NZ_PCFD01000074.1	Protein Homology	CDS	1	1060	.	+	2	ID=cds-WP_197315234.1;Parent=gene-CP553_RS11865;Dbxref=GenBank:WP_197315234.1;Name=WP_197315234.1;end_range=1060,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_217283962.1;locus_tag=CP553_RS11865;partial=true;product=E domain-containing protein;protein_id=WP_197315234.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000075.1 1 1044
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000075.1	RefSeq	region	1	1044	.	+	.	ID=NZ_PCFD01000075.1:1..1044;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000075.1	RefSeq	gene	1	154	.	-	.	ID=gene-CP553_RS13045;Name=CP553_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS13045;old_locus_tag=CP553_12260;partial=true;start_range=.,1
NZ_PCFD01000075.1	Protein Homology	CDS	1	154	.	-	0	ID=cds-WP_074442947.1;Parent=gene-CP553_RS13045;Dbxref=GenBank:WP_074442947.1;Name=WP_074442947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013937.6;locus_tag=CP553_RS13045;partial=true;product=Rop family plasmid primer RNA-binding protein;protein_id=WP_074442947.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000076.1 1 920
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000076.1	RefSeq	region	1	920	.	+	.	ID=NZ_PCFD01000076.1:1..920;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000076.1	RefSeq	gene	3	920	.	+	.	ID=gene-CP553_RS11875;Name=CP553_RS11875;end_range=920,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS11875;old_locus_tag=CP553_12275;partial=true
NZ_PCFD01000076.1	cmsearch	rRNA	3	920	.	+	.	ID=rna-CP553_RS11875;Parent=gene-CP553_RS11875;Dbxref=RFAM:RF00177;end_range=920,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11875;partial=true;product=16S ribosomal RNA
NZ_PCFD01000076.1	cmsearch	exon	3	920	.	+	.	ID=exon-CP553_RS11875-1;Parent=rna-CP553_RS11875;Dbxref=RFAM:RF00177;end_range=920,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11875;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PCFD01000077.1 1 918
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000077.1	RefSeq	region	1	918	.	+	.	ID=NZ_PCFD01000077.1:1..918;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000077.1	RefSeq	gene	1	918	.	+	.	ID=gene-CP553_RS11880;Name=CP553_RS11880;end_range=918,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11880;old_locus_tag=CP553_12280;partial=true;start_range=.,1
NZ_PCFD01000077.1	Protein Homology	CDS	1	918	.	+	0	ID=cds-WP_133230796.1;Parent=gene-CP553_RS11880;Dbxref=GenBank:WP_133230796.1;Name=WP_133230796.1;end_range=918,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499733.1;locus_tag=CP553_RS11880;partial=true;product=helicase-related protein;protein_id=WP_133230796.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000078.1 1 854
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000078.1	RefSeq	region	1	854	.	+	.	ID=NZ_PCFD01000078.1:1..854;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000078.1	RefSeq	pseudogene	1	603	.	-	.	ID=gene-CP553_RS11885;Name=CP553_RS11885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11885;old_locus_tag=CP553_12285;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000078.1	Protein Homology	CDS	1	603	.	-	0	ID=cds-CP553_RS11885;Parent=gene-CP553_RS11885;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985232.1;locus_tag=CP553_RS11885;partial=true;product=phage/plasmid primase%2C P4 family;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000078.1	RefSeq	gene	694	854	.	-	.	ID=gene-CP553_RS11890;Name=CP553_RS11890;end_range=854,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11890;old_locus_tag=CP553_12290;partial=true
NZ_PCFD01000078.1	Protein Homology	CDS	694	854	.	-	2	ID=cds-WP_116843040.1;Parent=gene-CP553_RS11890;Dbxref=GenBank:WP_116843040.1;Name=WP_116843040.1;end_range=854,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001103960.1;locus_tag=CP553_RS11890;partial=true;product=DUF1474 family protein;protein_id=WP_116843040.1;transl_table=11
##sequence-region NZ_PCFD01000079.1 1 802
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000079.1	RefSeq	region	1	802	.	+	.	ID=NZ_PCFD01000079.1:1..802;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000079.1	RefSeq	pseudogene	1	568	.	+	.	ID=gene-CP553_RS11895;Name=CP553_RS11895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11895;old_locus_tag=CP553_12295;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000079.1	Protein Homology	CDS	1	568	.	+	2	ID=cds-CP553_RS11895;Parent=gene-CP553_RS11895;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=CP553_RS11895;partial=true;product=IS1 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000079.1	RefSeq	pseudogene	583	802	.	+	.	ID=gene-CP553_RS11900;Name=CP553_RS11900;end_range=802,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11900;old_locus_tag=CP553_12300;partial=true;pseudo=true;start_range=.,583
NZ_PCFD01000079.1	Protein Homology	CDS	583	802	.	+	0	ID=cds-CP553_RS11900;Parent=gene-CP553_RS11900;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=802,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001339197.1;locus_tag=CP553_RS11900;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,583;transl_table=11
##sequence-region NZ_PCFD01000080.1 1 798
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000080.1	RefSeq	region	1	798	.	+	.	ID=NZ_PCFD01000080.1:1..798;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000080.1	RefSeq	pseudogene	1	798	.	+	.	ID=gene-CP553_RS11905;Name=CP553_RS11905;end_range=798,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11905;old_locus_tag=CP553_12305;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000080.1	Protein Homology	CDS	1	798	.	+	1	ID=cds-CP553_RS11905;Parent=gene-CP553_RS11905;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0008658;end_range=798,.;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499985.1;locus_tag=CP553_RS11905;partial=true;product=penicillin-binding transpeptidase domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000081.1 1 788
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000081.1	RefSeq	region	1	788	.	+	.	ID=NZ_PCFD01000081.1:1..788;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000081.1	RefSeq	gene	1	788	.	-	.	ID=gene-CP553_RS11910;Name=CP553_RS11910;end_range=788,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11910;old_locus_tag=CP553_12310;partial=true;start_range=.,1
NZ_PCFD01000081.1	Protein Homology	CDS	1	788	.	-	2	ID=cds-WP_116843041.1;Parent=gene-CP553_RS11910;Dbxref=GenBank:WP_116843041.1;Name=WP_116843041.1;end_range=788,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498999.1;locus_tag=CP553_RS11910;partial=true;product=putative inorganic carbon transporter subunit DabA;protein_id=WP_116843041.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000082.1 1 786
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000082.1	RefSeq	region	1	786	.	+	.	ID=NZ_PCFD01000082.1:1..786;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000082.1	RefSeq	gene	269	457	.	+	.	ID=gene-CP553_RS11915;Name=CP553_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11915;old_locus_tag=CP553_12315
NZ_PCFD01000082.1	Protein Homology	CDS	269	457	.	+	0	ID=cds-WP_001063224.1;Parent=gene-CP553_RS11915;Dbxref=GenBank:WP_001063224.1;Name=WP_001063224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001063224.1;locus_tag=CP553_RS11915;product=hypothetical protein;protein_id=WP_001063224.1;transl_table=11
NZ_PCFD01000082.1	RefSeq	gene	566	786	.	-	.	ID=gene-CP553_RS11920;Name=CP553_RS11920;end_range=786,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11920;old_locus_tag=CP553_12320;partial=true
NZ_PCFD01000082.1	Protein Homology	CDS	566	786	.	-	2	ID=cds-WP_133062770.1-3;Parent=gene-CP553_RS11920;Dbxref=GenBank:WP_133062770.1;Name=WP_133062770.1;end_range=786,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS11920;partial=true;product=DDE-type integrase/transposase/recombinase;protein_id=WP_133062770.1;transl_table=11
##sequence-region NZ_PCFD01000083.1 1 784
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000083.1	RefSeq	region	1	784	.	+	.	ID=NZ_PCFD01000083.1:1..784;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000083.1	RefSeq	gene	1	538	.	+	.	ID=gene-CP553_RS11925;Name=CP553_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11925;old_locus_tag=CP553_12325;partial=true;start_range=.,1
NZ_PCFD01000083.1	Protein Homology	CDS	1	538	.	+	1	ID=cds-WP_133230801.1;Parent=gene-CP553_RS11925;Dbxref=GenBank:WP_133230801.1;Name=WP_133230801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501287.1;locus_tag=CP553_RS11925;partial=true;product=VOC family protein;protein_id=WP_133230801.1;start_range=.,1;transl_table=11
NZ_PCFD01000083.1	RefSeq	pseudogene	658	784	.	-	.	ID=gene-CP553_RS11930;Name=CP553_RS11930;end_range=784,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11930;partial=true;pseudo=true
NZ_PCFD01000083.1	Protein Homology	CDS	658	784	.	-	1	ID=cds-CP553_RS11930;Parent=gene-CP553_RS11930;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=784,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501288.1;locus_tag=CP553_RS11930;partial=true;product=NAD(P)H-dependent oxidoreductase;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000084.1 1 783
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000084.1	RefSeq	region	1	783	.	+	.	ID=NZ_PCFD01000084.1:1..783;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000084.1	RefSeq	pseudogene	1	310	.	+	.	ID=gene-CP553_RS12940;Name=CP553_RS12940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12940;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000084.1	GeneMarkS-2+	CDS	1	310	.	+	1	ID=cds-CP553_RS12940;Parent=gene-CP553_RS12940;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS12940;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000084.1	RefSeq	pseudogene	506	783	.	+	.	ID=gene-CP553_RS12945;Name=CP553_RS12945;end_range=783,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12945;partial=true;pseudo=true
NZ_PCFD01000084.1	GeneMarkS-2+	CDS	506	783	.	+	0	ID=cds-CP553_RS12945;Parent=gene-CP553_RS12945;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=783,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS12945;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000085.1 1 782
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000085.1	RefSeq	region	1	782	.	+	.	ID=NZ_PCFD01000085.1:1..782;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000085.1	RefSeq	gene	1	248	.	+	.	ID=gene-CP553_RS11940;Name=CP553_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11940;old_locus_tag=CP553_12335;partial=true;start_range=.,1
NZ_PCFD01000085.1	Protein Homology	CDS	1	248	.	+	2	ID=cds-WP_269436768.1;Parent=gene-CP553_RS11940;Dbxref=GenBank:WP_269436768.1;Name=WP_269436768.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498748.1;locus_tag=CP553_RS11940;partial=true;product=Asd/ArgC dimerization domain-containing protein;protein_id=WP_269436768.1;start_range=.,1;transl_table=11
NZ_PCFD01000085.1	RefSeq	gene	260	782	.	+	.	ID=gene-CP553_RS11945;Name=CP553_RS11945;end_range=782,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11945;old_locus_tag=CP553_12340;partial=true
NZ_PCFD01000085.1	Protein Homology	CDS	260	782	.	+	0	ID=cds-WP_197315236.1;Parent=gene-CP553_RS11945;Dbxref=GenBank:WP_197315236.1;Name=WP_197315236.1;Ontology_term=GO:0006526,GO:0004358;end_range=782,.;gbkey=CDS;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-L-ornithine as donor|0004358||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498747.1;locus_tag=CP553_RS11945;partial=true;product=bifunctional ornithine acetyltransferase/N-acetylglutamate synthase;protein_id=WP_197315236.1;transl_table=11
##sequence-region NZ_PCFD01000086.1 1 778
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000086.1	RefSeq	region	1	778	.	+	.	ID=NZ_PCFD01000086.1:1..778;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000086.1	RefSeq	gene	1	469	.	+	.	ID=gene-CP553_RS12950;Name=CP553_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12950;partial=true;start_range=.,1
NZ_PCFD01000086.1	GeneMarkS-2+	CDS	1	469	.	+	1	ID=cds-WP_269436769.1;Parent=gene-CP553_RS12950;Dbxref=GenBank:WP_269436769.1;Name=WP_269436769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS12950;partial=true;product=hypothetical protein;protein_id=WP_269436769.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000087.1 1 776
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000087.1	RefSeq	region	1	776	.	+	.	ID=NZ_PCFD01000087.1:1..776;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000087.1	RefSeq	pseudogene	1	763	.	-	.	ID=gene-CP553_RS11955;Name=CP553_RS11955;end_range=763,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS11955;old_locus_tag=CP553_12350;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000087.1	Protein Homology	CDS	1	763	.	-	0	ID=cds-CP553_RS11955;Parent=gene-CP553_RS11955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016491;end_range=763,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=CP553_RS11955;partial=true;product=molybdopterin-dependent oxidoreductase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000088.1 1 770
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000088.1	RefSeq	region	1	770	.	+	.	ID=NZ_PCFD01000088.1:1..770;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000088.1	RefSeq	gene	1	760	.	+	.	ID=gene-CP553_RS11960;Name=CP553_RS11960;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS11960;old_locus_tag=CP553_12355;partial=true;start_range=.,1
NZ_PCFD01000088.1	cmsearch	rRNA	1	760	.	+	.	ID=rna-CP553_RS11960;Parent=gene-CP553_RS11960;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11960;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000088.1	cmsearch	exon	1	760	.	+	.	ID=exon-CP553_RS11960-1;Parent=rna-CP553_RS11960;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS11960;partial=true;product=16S ribosomal RNA;start_range=.,1
##sequence-region NZ_PCFD01000089.1 1 766
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000089.1	RefSeq	region	1	766	.	+	.	ID=NZ_PCFD01000089.1:1..766;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000089.1	RefSeq	gene	24	766	.	+	.	ID=gene-CP553_RS11965;Name=CP553_RS11965;end_range=766,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11965;old_locus_tag=CP553_12360;partial=true
NZ_PCFD01000089.1	Protein Homology	CDS	24	766	.	+	0	ID=cds-WP_002470670.1;Parent=gene-CP553_RS11965;Dbxref=GenBank:WP_002470670.1;Name=WP_002470670.1;Ontology_term=GO:0004040,GO:0042834;end_range=766,.;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501032.1;locus_tag=CP553_RS11965;partial=true;product=CHAP domain-containing protein;protein_id=WP_002470670.1;transl_table=11
##sequence-region NZ_PCFD01000090.1 1 757
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000090.1	RefSeq	region	1	757	.	+	.	ID=NZ_PCFD01000090.1:1..757;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000090.1	RefSeq	gene	8	757	.	-	.	ID=gene-CP553_RS11970;Name=CP553_RS11970;end_range=757,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11970;old_locus_tag=CP553_12365;partial=true
NZ_PCFD01000090.1	Protein Homology	CDS	8	757	.	-	0	ID=cds-WP_116843042.1;Parent=gene-CP553_RS11970;Dbxref=GenBank:WP_116843042.1;Name=WP_116843042.1;end_range=757,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501464.1;locus_tag=CP553_RS11970;partial=true;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_116843042.1;transl_table=11
##sequence-region NZ_PCFD01000091.1 1 755
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000091.1	RefSeq	region	1	755	.	+	.	ID=NZ_PCFD01000091.1:1..755;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000091.1	RefSeq	gene	1	755	.	+	.	ID=gene-CP553_RS11975;Name=CP553_RS11975;end_range=755,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11975;old_locus_tag=CP553_12370;partial=true;start_range=.,1
NZ_PCFD01000091.1	Protein Homology	CDS	1	755	.	+	1	ID=cds-WP_116843043.1;Parent=gene-CP553_RS11975;Dbxref=GenBank:WP_116843043.1;Name=WP_116843043.1;Ontology_term=GO:0004180;end_range=755,.;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501066.1;locus_tag=CP553_RS11975;partial=true;product=amidohydrolase;protein_id=WP_116843043.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000092.1 1 751
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000092.1	RefSeq	region	1	751	.	+	.	ID=NZ_PCFD01000092.1:1..751;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000092.1	RefSeq	gene	1	751	.	-	.	ID=gene-CP553_RS11980;Name=CP553_RS11980;end_range=751,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11980;old_locus_tag=CP553_12375;partial=true;start_range=.,1
NZ_PCFD01000092.1	Protein Homology	CDS	1	751	.	-	1	ID=cds-WP_133230805.1;Parent=gene-CP553_RS11980;Dbxref=GenBank:WP_133230805.1;Name=WP_133230805.1;end_range=751,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109384.1;locus_tag=CP553_RS11980;partial=true;product=GA module-containing protein;protein_id=WP_133230805.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000093.1 1 749
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000093.1	RefSeq	region	1	749	.	+	.	ID=NZ_PCFD01000093.1:1..749;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000093.1	RefSeq	gene	1	749	.	+	.	ID=gene-CP553_RS11985;Name=CP553_RS11985;end_range=749,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11985;old_locus_tag=CP553_12380;partial=true;start_range=.,1
NZ_PCFD01000093.1	Protein Homology	CDS	1	749	.	+	0	ID=cds-WP_116843044.1;Parent=gene-CP553_RS11985;Dbxref=GenBank:WP_116843044.1;Name=WP_116843044.1;Ontology_term=GO:0008483,GO:0030170;end_range=749,.;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501377.1;locus_tag=CP553_RS11985;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_116843044.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000094.1 1 740
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000094.1	RefSeq	region	1	740	.	+	.	ID=NZ_PCFD01000094.1:1..740;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000094.1	RefSeq	gene	1	740	.	-	.	ID=gene-CP553_RS11990;Name=CP553_RS11990;end_range=740,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS11990;old_locus_tag=CP553_12385;partial=true;start_range=.,1
NZ_PCFD01000094.1	GeneMarkS-2+	CDS	1	740	.	-	0	ID=cds-WP_269436770.1;Parent=gene-CP553_RS11990;Dbxref=GenBank:WP_269436770.1;Name=WP_269436770.1;end_range=740,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS11990;partial=true;product=hypothetical protein;protein_id=WP_269436770.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000095.1 1 722
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000095.1	RefSeq	region	1	722	.	+	.	ID=NZ_PCFD01000095.1:1..722;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000096.1 1 710
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000096.1	RefSeq	region	1	710	.	+	.	ID=NZ_PCFD01000096.1:1..710;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000096.1	RefSeq	gene	61	710	.	-	.	ID=gene-CP553_RS12000;Name=CP553_RS12000;end_range=710,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12000;old_locus_tag=CP553_12395;partial=true
NZ_PCFD01000096.1	Protein Homology	CDS	61	710	.	-	2	ID=cds-WP_116843045.1;Parent=gene-CP553_RS12000;Dbxref=GenBank:WP_116843045.1;Name=WP_116843045.1;Ontology_term=GO:0016020;end_range=710,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499433.1;locus_tag=CP553_RS12000;partial=true;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_116843045.1;transl_table=11
##sequence-region NZ_PCFD01000097.1 1 710
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000097.1	RefSeq	region	1	710	.	+	.	ID=NZ_PCFD01000097.1:1..710;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000097.1	RefSeq	gene	1	710	.	+	.	ID=gene-CP553_RS12005;Name=CP553_RS12005;end_range=710,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12005;old_locus_tag=CP553_12400;partial=true;start_range=.,1
NZ_PCFD01000097.1	Protein Homology	CDS	1	710	.	+	0	ID=cds-WP_197315237.1;Parent=gene-CP553_RS12005;Dbxref=GenBank:WP_197315237.1;Name=WP_197315237.1;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;end_range=710,.;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500516.1;locus_tag=CP553_RS12005;partial=true;product=peptidoglycan recognition protein family protein;protein_id=WP_197315237.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000099.1 1 691
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000099.1	RefSeq	region	1	691	.	+	.	ID=NZ_PCFD01000099.1:1..691;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000099.1	RefSeq	pseudogene	1	625	.	+	.	ID=gene-CP553_RS12010;Name=CP553_RS12010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12010;old_locus_tag=CP553_12410;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000099.1	Protein Homology	CDS	1	625	.	+	1	ID=cds-CP553_RS12010;Parent=gene-CP553_RS12010;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499096.2;locus_tag=CP553_RS12010;partial=true;product=DNA-directed RNA polymerase subunit beta;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000100.1 1 687
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000100.1	RefSeq	region	1	687	.	+	.	ID=NZ_PCFD01000100.1:1..687;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000100.1	RefSeq	gene	1	687	.	+	.	ID=gene-CP553_RS12015;Name=CP553_RS12015;end_range=687,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12015;old_locus_tag=CP553_12415;partial=true;start_range=.,1
NZ_PCFD01000100.1	Protein Homology	CDS	1	687	.	+	1	ID=cds-WP_197315238.1;Parent=gene-CP553_RS12015;Dbxref=GenBank:WP_197315238.1;Name=WP_197315238.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;end_range=687,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499257.1;locus_tag=CP553_RS12015;partial=true;product=SLC13 family permease;protein_id=WP_197315238.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000101.1 1 687
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000101.1	RefSeq	region	1	687	.	+	.	ID=NZ_PCFD01000101.1:1..687;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000101.1	RefSeq	gene	9	272	.	-	.	ID=gene-CP553_RS12020;Name=CP553_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12020;old_locus_tag=CP553_12420
NZ_PCFD01000101.1	Protein Homology	CDS	9	272	.	-	0	ID=cds-WP_001234988.1;Parent=gene-CP553_RS12020;Dbxref=GenBank:WP_001234988.1;Name=WP_001234988.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499058.1;locus_tag=CP553_RS12020;product=RNA-binding S4 domain-containing protein;protein_id=WP_001234988.1;transl_table=11
NZ_PCFD01000101.1	RefSeq	gene	269	687	.	-	.	ID=gene-CP553_RS12025;Name=CP553_RS12025;end_range=687,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12025;old_locus_tag=CP553_12425;partial=true
NZ_PCFD01000101.1	Protein Homology	CDS	269	687	.	-	2	ID=cds-WP_331461766.1;Parent=gene-CP553_RS12025;Dbxref=GenBank:WP_331461766.1;Name=WP_331461766.1;end_range=687,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499057.1;locus_tag=CP553_RS12025;partial=true;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_331461766.1;transl_table=11
##sequence-region NZ_PCFD01000102.1 1 681
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000102.1	RefSeq	region	1	681	.	+	.	ID=NZ_PCFD01000102.1:1..681;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000102.1	RefSeq	pseudogene	1	602	.	-	.	ID=gene-CP553_RS12030;Name=CP553_RS12030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12030;old_locus_tag=CP553_12430;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000102.1	Protein Homology	CDS	1	602	.	-	0	ID=cds-CP553_RS12030;Parent=gene-CP553_RS12030;Note=internal stop%3B incomplete%3B missing C-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501368.1;locus_tag=CP553_RS12030;partial=true;product=CocE/NonD family hydrolase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000103.1 1 680
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000103.1	RefSeq	region	1	680	.	+	.	ID=NZ_PCFD01000103.1:1..680;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000103.1	RefSeq	pseudogene	1	490	.	+	.	ID=gene-CP553_RS12035;Name=CP553_RS12035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12035;old_locus_tag=CP553_12435;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000103.1	Protein Homology	CDS	1	490	.	+	2	ID=cds-CP553_RS12035;Parent=gene-CP553_RS12035;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_099156037.1;locus_tag=CP553_RS12035;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000103.1	RefSeq	pseudogene	551	680	.	+	.	ID=gene-CP553_RS12040;Name=CP553_RS12040;end_range=680,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12040;old_locus_tag=CP553_12440;partial=true;pseudo=true;start_range=.,551
NZ_PCFD01000103.1	Protein Homology	CDS	551	680	.	+	0	ID=cds-CP553_RS12040;Parent=gene-CP553_RS12040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=680,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032495458.1;locus_tag=CP553_RS12040;partial=true;product=transposase;pseudo=true;start_range=.,551;transl_table=11
##sequence-region NZ_PCFD01000104.1 1 669
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000104.1	RefSeq	region	1	669	.	+	.	ID=NZ_PCFD01000104.1:1..669;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000104.1	RefSeq	gene	1	669	.	-	.	ID=gene-CP553_RS12045;Name=CP553_RS12045;end_range=669,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12045;old_locus_tag=CP553_12445;partial=true;start_range=.,1
NZ_PCFD01000104.1	Protein Homology	CDS	1	669	.	-	2	ID=cds-WP_116843046.1;Parent=gene-CP553_RS12045;Dbxref=GenBank:WP_116843046.1;Name=WP_116843046.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;end_range=669,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000546595.1;locus_tag=CP553_RS12045;partial=true;product=HAD-IC family P-type ATPase;protein_id=WP_116843046.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000105.1 1 669
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000105.1	RefSeq	region	1	669	.	+	.	ID=NZ_PCFD01000105.1:1..669;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000105.1	RefSeq	gene	1	669	.	-	.	ID=gene-CP553_RS12050;Name=CP553_RS12050;end_range=669,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12050;old_locus_tag=CP553_12450;partial=true;start_range=.,1
NZ_PCFD01000105.1	Protein Homology	CDS	1	669	.	-	1	ID=cds-WP_133230815.1;Parent=gene-CP553_RS12050;Dbxref=GenBank:WP_133230815.1;Name=WP_133230815.1;Ontology_term=GO:0006528,GO:0004067;end_range=669,.;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500016.1;locus_tag=CP553_RS12050;partial=true;product=asparaginase;protein_id=WP_133230815.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000106.1 1 660
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000106.1	RefSeq	region	1	660	.	+	.	ID=NZ_PCFD01000106.1:1..660;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000106.1	RefSeq	gene	1	660	.	-	.	ID=gene-CP553_RS12055;Name=CP553_RS12055;end_range=660,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12055;old_locus_tag=CP553_12455;partial=true;start_range=.,1
NZ_PCFD01000106.1	Protein Homology	CDS	1	660	.	-	2	ID=cds-WP_331461768.1;Parent=gene-CP553_RS12055;Dbxref=GenBank:WP_331461768.1;Name=WP_331461768.1;Ontology_term=GO:0005524;end_range=660,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500736.1;locus_tag=CP553_RS12055;partial=true;product=TCP-1/cpn60 chaperonin family protein;protein_id=WP_331461768.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000107.1 1 651
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000107.1	RefSeq	region	1	651	.	+	.	ID=NZ_PCFD01000107.1:1..651;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000107.1	RefSeq	gene	8	651	.	-	.	ID=gene-CP553_RS12060;Name=CP553_RS12060;end_range=651,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12060;old_locus_tag=CP553_12460;partial=true
NZ_PCFD01000107.1	Protein Homology	CDS	8	651	.	-	2	ID=cds-WP_331461769.1;Parent=gene-CP553_RS12060;Dbxref=GenBank:WP_331461769.1;Name=WP_331461769.1;Ontology_term=GO:0009098,GO:0003852;end_range=651,.;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500767.1;locus_tag=CP553_RS12060;partial=true;product=alpha-isopropylmalate synthase regulatory domain-containing protein;protein_id=WP_331461769.1;transl_table=11
##sequence-region NZ_PCFD01000108.1 1 552
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000108.1	RefSeq	region	1	552	.	+	.	ID=NZ_PCFD01000108.1:1..552;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000109.1 1 643
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000109.1	RefSeq	region	1	643	.	+	.	ID=NZ_PCFD01000109.1:1..643;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000109.1	RefSeq	gene	1	643	.	+	.	ID=gene-CP553_RS12070;Name=CP553_RS12070;end_range=643,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12070;old_locus_tag=CP553_12475;partial=true;start_range=.,1
NZ_PCFD01000109.1	Protein Homology	CDS	1	643	.	+	2	ID=cds-WP_269436771.1;Parent=gene-CP553_RS12070;Dbxref=GenBank:WP_269436771.1;Name=WP_269436771.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;end_range=643,.;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499018.1;locus_tag=CP553_RS12070;partial=true;product=glutamate synthase-related protein;protein_id=WP_269436771.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000110.1 1 643
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000110.1	RefSeq	region	1	643	.	+	.	ID=NZ_PCFD01000110.1:1..643;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000110.1	RefSeq	gene	11	643	.	-	.	ID=gene-CP553_RS12075;Name=CP553_RS12075;end_range=643,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS12075;old_locus_tag=CP553_12480;partial=true
NZ_PCFD01000110.1	cmsearch	rRNA	11	643	.	-	.	ID=rna-CP553_RS12075;Parent=gene-CP553_RS12075;Dbxref=RFAM:RF00177;end_range=643,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS12075;partial=true;product=16S ribosomal RNA
NZ_PCFD01000110.1	cmsearch	exon	11	643	.	-	.	ID=exon-CP553_RS12075-1;Parent=rna-CP553_RS12075;Dbxref=RFAM:RF00177;end_range=643,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS12075;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PCFD01000111.1 1 642
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000111.1	RefSeq	region	1	642	.	+	.	ID=NZ_PCFD01000111.1:1..642;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000111.1	RefSeq	gene	11	642	.	-	.	ID=gene-CP553_RS12080;Name=CP553_RS12080;end_range=642,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS12080;old_locus_tag=CP553_12485;partial=true
NZ_PCFD01000111.1	cmsearch	rRNA	11	642	.	-	.	ID=rna-CP553_RS12080;Parent=gene-CP553_RS12080;Dbxref=RFAM:RF00177;end_range=642,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS12080;partial=true;product=16S ribosomal RNA
NZ_PCFD01000111.1	cmsearch	exon	11	642	.	-	.	ID=exon-CP553_RS12080-1;Parent=rna-CP553_RS12080;Dbxref=RFAM:RF00177;end_range=642,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS12080;partial=true;product=16S ribosomal RNA
##sequence-region NZ_PCFD01000112.1 1 637
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000112.1	RefSeq	region	1	637	.	+	.	ID=NZ_PCFD01000112.1:1..637;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000112.1	RefSeq	pseudogene	1	637	.	+	.	ID=gene-CP553_RS12085;Name=lip2;end_range=637,.;gbkey=Gene;gene=lip2;gene_biotype=pseudogene;locus_tag=CP553_RS12085;old_locus_tag=CP553_12490;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000112.1	Protein Homology	CDS	1	637	.	+	1	ID=cds-CP553_RS12085;Parent=gene-CP553_RS12085;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=637,.;gbkey=CDS;gene=lip2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498890.1;locus_tag=CP553_RS12085;partial=true;product=YSIRK domain-containing triacylglycerol lipase Lip2/Geh;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000113.1 1 635
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000113.1	RefSeq	region	1	635	.	+	.	ID=NZ_PCFD01000113.1:1..635;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000113.1	RefSeq	gene	8	635	.	+	.	ID=gene-CP553_RS12090;Name=CP553_RS12090;end_range=635,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12090;old_locus_tag=CP553_12495;partial=true
NZ_PCFD01000113.1	Protein Homology	CDS	8	635	.	+	0	ID=cds-WP_133230818.1;Parent=gene-CP553_RS12090;Dbxref=GenBank:WP_133230818.1;Name=WP_133230818.1;Ontology_term=GO:0030170;end_range=635,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499065.1;locus_tag=CP553_RS12090;partial=true;product=PLP-dependent cysteine synthase family protein;protein_id=WP_133230818.1;transl_table=11
##sequence-region NZ_PCFD01000114.1 1 635
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000114.1	RefSeq	region	1	635	.	+	.	ID=NZ_PCFD01000114.1:1..635;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000114.1	RefSeq	gene	1	635	.	+	.	ID=gene-CP553_RS12095;Name=CP553_RS12095;end_range=635,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12095;old_locus_tag=CP553_12500;partial=true;start_range=.,1
NZ_PCFD01000114.1	Protein Homology	CDS	1	635	.	+	0	ID=cds-WP_133230821.1;Parent=gene-CP553_RS12095;Dbxref=GenBank:WP_133230821.1;Name=WP_133230821.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;end_range=635,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499448.1;locus_tag=CP553_RS12095;partial=true;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_133230821.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000115.1 1 634
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000115.1	RefSeq	region	1	634	.	+	.	ID=NZ_PCFD01000115.1:1..634;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000115.1	RefSeq	gene	1	634	.	+	.	ID=gene-CP553_RS12100;Name=CP553_RS12100;end_range=634,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12100;old_locus_tag=CP553_12505;partial=true;start_range=.,1
NZ_PCFD01000115.1	Protein Homology	CDS	1	634	.	+	2	ID=cds-WP_133230824.1;Parent=gene-CP553_RS12100;Dbxref=GenBank:WP_133230824.1;Name=WP_133230824.1;Ontology_term=GO:0005975,GO:0004553;end_range=634,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498831.1;locus_tag=CP553_RS12100;partial=true;product=family 1 glycosylhydrolase;protein_id=WP_133230824.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000116.1 1 632
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000116.1	RefSeq	region	1	632	.	+	.	ID=NZ_PCFD01000116.1:1..632;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000116.1	RefSeq	gene	1	632	.	-	.	ID=gene-CP553_RS13100;Name=CP553_RS13100;end_range=632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS13100;old_locus_tag=CP553_12510;partial=true;start_range=.,1
NZ_PCFD01000116.1	Protein Homology	CDS	1	632	.	-	0	ID=cds-WP_133230827.1;Parent=gene-CP553_RS13100;Dbxref=GenBank:WP_133230827.1;Name=WP_133230827.1;Ontology_term=GO:0006635,GO:0016746;end_range=632,.;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498792.1;locus_tag=CP553_RS13100;partial=true;product=thiolase family protein;protein_id=WP_133230827.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000117.1 1 631
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000117.1	RefSeq	region	1	631	.	+	.	ID=NZ_PCFD01000117.1:1..631;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000118.1 1 630
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000118.1	RefSeq	region	1	630	.	+	.	ID=NZ_PCFD01000118.1:1..630;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000119.1 1 625
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000119.1	RefSeq	region	1	625	.	+	.	ID=NZ_PCFD01000119.1:1..625;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000119.1	RefSeq	gene	1	625	.	+	.	ID=gene-CP553_RS12120;Name=ebh;end_range=625,.;gbkey=Gene;gene=ebh;gene_biotype=protein_coding;locus_tag=CP553_RS12120;old_locus_tag=CP553_12525;partial=true;start_range=.,1
NZ_PCFD01000119.1	Protein Homology	CDS	1	625	.	+	1	ID=cds-WP_116843047.1;Parent=gene-CP553_RS12120;Dbxref=GenBank:WP_116843047.1;Name=WP_116843047.1;Ontology_term=GO:0006972;end_range=625,.;gbkey=CDS;gene=ebh;go_process=hyperosmotic response|0006972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499969.1;locus_tag=CP553_RS12120;partial=true;product=hyperosmolarity resistance protein Ebh;protein_id=WP_116843047.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000120.1 1 623
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000120.1	RefSeq	region	1	623	.	+	.	ID=NZ_PCFD01000120.1:1..623;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000120.1	RefSeq	pseudogene	1	229	.	-	.	ID=gene-CP553_RS12125;Name=cap8B;gbkey=Gene;gene=cap8B;gene_biotype=pseudogene;locus_tag=CP553_RS12125;old_locus_tag=CP553_12530;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000120.1	Protein Homology	CDS	1	229	.	-	0	ID=cds-CP553_RS12125;Parent=gene-CP553_RS12125;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=cap8B;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498715.1;locus_tag=CP553_RS12125;partial=true;product=type 8 capsular polysaccharide synthesis protein Cap8B;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000120.1	RefSeq	pseudogene	245	623	.	-	.	ID=gene-CP553_RS12130;Name=capA;end_range=623,.;gbkey=Gene;gene=capA;gene_biotype=pseudogene;locus_tag=CP553_RS12130;old_locus_tag=CP553_12535;partial=true;pseudo=true
NZ_PCFD01000120.1	Protein Homology	CDS	245	623	.	-	1	ID=cds-CP553_RS12130;Parent=gene-CP553_RS12130;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=623,.;gbkey=CDS;gene=capA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498714.1;locus_tag=CP553_RS12130;partial=true;product=capsular polysaccharide type 5/8 biosynthesis protein CapA;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000121.1 1 618
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000121.1	RefSeq	region	1	618	.	+	.	ID=NZ_PCFD01000121.1:1..618;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000121.1	RefSeq	pseudogene	1	440	.	-	.	ID=gene-CP553_RS12135;Name=CP553_RS12135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12135;old_locus_tag=CP553_12540;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000121.1	Protein Homology	CDS	1	440	.	-	0	ID=cds-CP553_RS12135;Parent=gene-CP553_RS12135;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500608.1;locus_tag=CP553_RS12135;partial=true;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000121.1	RefSeq	gene	453	618	.	-	.	ID=gene-CP553_RS12140;Name=CP553_RS12140;end_range=618,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12140;old_locus_tag=CP553_12545;partial=true
NZ_PCFD01000121.1	Protein Homology	CDS	453	618	.	-	1	ID=cds-WP_269436772.1;Parent=gene-CP553_RS12140;Dbxref=GenBank:WP_269436772.1;Name=WP_269436772.1;end_range=618,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500609.1;locus_tag=CP553_RS12140;partial=true;product=amidase family protein;protein_id=WP_269436772.1;transl_table=11
##sequence-region NZ_PCFD01000122.1 1 618
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000122.1	RefSeq	region	1	618	.	+	.	ID=NZ_PCFD01000122.1:1..618;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000122.1	RefSeq	gene	1	618	.	-	.	ID=gene-CP553_RS12145;Name=CP553_RS12145;end_range=618,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12145;old_locus_tag=CP553_12550;partial=true;start_range=.,1
NZ_PCFD01000122.1	Protein Homology	CDS	1	618	.	-	1	ID=cds-WP_165798632.1;Parent=gene-CP553_RS12145;Dbxref=GenBank:WP_165798632.1;Name=WP_165798632.1;end_range=618,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001039417.1;locus_tag=CP553_RS12145;partial=true;product=Cna B-type domain-containing protein;protein_id=WP_165798632.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000123.1 1 616
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000123.1	RefSeq	region	1	616	.	+	.	ID=NZ_PCFD01000123.1:1..616;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000123.1	RefSeq	gene	57	616	.	+	.	ID=gene-CP553_RS12150;Name=CP553_RS12150;end_range=616,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12150;old_locus_tag=CP553_12555;partial=true
NZ_PCFD01000123.1	Protein Homology	CDS	57	616	.	+	0	ID=cds-WP_031924742.1;Parent=gene-CP553_RS12150;Dbxref=GenBank:WP_031924742.1;Name=WP_031924742.1;Ontology_term=GO:0006313,GO:0004803;end_range=616,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=CP553_RS12150;partial=true;product=IS6-like element IS257 family transposase;protein_id=WP_031924742.1;transl_table=11
##sequence-region NZ_PCFD01000124.1 1 613
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000124.1	RefSeq	region	1	613	.	+	.	ID=NZ_PCFD01000124.1:1..613;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000124.1	RefSeq	gene	1	568	.	-	.	ID=gene-CP553_RS12155;Name=CP553_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12155;old_locus_tag=CP553_12560;partial=true;start_range=.,1
NZ_PCFD01000124.1	Protein Homology	CDS	1	568	.	-	0	ID=cds-WP_116843049.1;Parent=gene-CP553_RS12155;Dbxref=GenBank:WP_116843049.1;Name=WP_116843049.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500121.1;locus_tag=CP553_RS12155;partial=true;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_116843049.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000125.1 1 611
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000125.1	RefSeq	region	1	611	.	+	.	ID=NZ_PCFD01000125.1:1..611;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000125.1	RefSeq	pseudogene	1	611	.	+	.	ID=gene-CP553_RS12160;Name=CP553_RS12160;end_range=611,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12160;old_locus_tag=CP553_12565;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000125.1	Protein Homology	CDS	1	611	.	+	1	ID=cds-CP553_RS12160;Parent=gene-CP553_RS12160;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=611,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001056302.1;locus_tag=CP553_RS12160;partial=true;product=MSCRAMM family adhesin clumping factor ClfA;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000126.1 1 610
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000126.1	RefSeq	region	1	610	.	+	.	ID=NZ_PCFD01000126.1:1..610;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000126.1	RefSeq	pseudogene	1	374	.	+	.	ID=gene-CP553_RS12165;Name=CP553_RS12165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12165;old_locus_tag=CP553_12570;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000126.1	Protein Homology	CDS	1	374	.	+	2	ID=cds-CP553_RS12165;Parent=gene-CP553_RS12165;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498768.1;locus_tag=CP553_RS12165;partial=true;product=gamma-glutamyltransferase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000127.1 1 610
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000127.1	RefSeq	region	1	610	.	+	.	ID=NZ_PCFD01000127.1:1..610;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000127.1	RefSeq	pseudogene	1	610	.	-	.	ID=gene-CP553_RS12170;Name=CP553_RS12170;end_range=610,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12170;old_locus_tag=CP553_12575;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000127.1	Protein Homology	CDS	1	610	.	-	0	ID=cds-CP553_RS12170;Parent=gene-CP553_RS12170;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=610,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500880.1;locus_tag=CP553_RS12170;partial=true;product=SasC/FmtB family protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000128.1 1 607
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000128.1	RefSeq	region	1	607	.	+	.	ID=NZ_PCFD01000128.1:1..607;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000128.1	RefSeq	pseudogene	1	607	.	+	.	ID=gene-CP553_RS12175;Name=CP553_RS12175;end_range=607,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12175;old_locus_tag=CP553_12580;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000128.1	Protein Homology	CDS	1	607	.	+	1	ID=cds-CP553_RS12175;Parent=gene-CP553_RS12175;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=607,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017646277.1;locus_tag=CP553_RS12175;partial=true;product=YtxH domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000129.1 1 604
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000129.1	RefSeq	region	1	604	.	+	.	ID=NZ_PCFD01000129.1:1..604;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000129.1	RefSeq	gene	1	604	.	-	.	ID=gene-CP553_RS12180;Name=CP553_RS12180;end_range=604,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12180;old_locus_tag=CP553_12585;partial=true;start_range=.,1
NZ_PCFD01000129.1	Protein Homology	CDS	1	604	.	-	0	ID=cds-WP_133230830.1;Parent=gene-CP553_RS12180;Dbxref=GenBank:WP_133230830.1;Name=WP_133230830.1;end_range=604,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499969.1;locus_tag=CP553_RS12180;partial=true;product=GA module-containing protein;protein_id=WP_133230830.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000130.1 1 593
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000130.1	RefSeq	region	1	593	.	+	.	ID=NZ_PCFD01000130.1:1..593;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000130.1	RefSeq	gene	1	593	.	-	.	ID=gene-CP553_RS12185;Name=CP553_RS12185;end_range=593,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12185;old_locus_tag=CP553_12590;partial=true;start_range=.,1
NZ_PCFD01000130.1	Protein Homology	CDS	1	593	.	-	1	ID=cds-WP_197315239.1;Parent=gene-CP553_RS12185;Dbxref=GenBank:WP_197315239.1;Name=WP_197315239.1;end_range=593,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499969.1;locus_tag=CP553_RS12185;partial=true;product=GA module-containing protein;protein_id=WP_197315239.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000131.1 1 593
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000131.1	RefSeq	region	1	593	.	+	.	ID=NZ_PCFD01000131.1:1..593;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000131.1	RefSeq	gene	1	593	.	-	.	ID=gene-CP553_RS12190;Name=CP553_RS12190;end_range=593,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12190;old_locus_tag=CP553_12595;partial=true;start_range=.,1
NZ_PCFD01000131.1	Protein Homology	CDS	1	593	.	-	0	ID=cds-WP_165798633.1;Parent=gene-CP553_RS12190;Dbxref=GenBank:WP_165798633.1;Name=WP_165798633.1;Ontology_term=GO:0003677,GO:0008170;end_range=593,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028656.1;locus_tag=CP553_RS12190;partial=true;product=N-6 DNA methylase;protein_id=WP_165798633.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000132.1 1 593
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000132.1	RefSeq	region	1	593	.	+	.	ID=NZ_PCFD01000132.1:1..593;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000132.1	RefSeq	pseudogene	1	593	.	+	.	ID=gene-CP553_RS12195;Name=gdpP;end_range=593,.;gbkey=Gene;gene=gdpP;gene_biotype=pseudogene;locus_tag=CP553_RS12195;old_locus_tag=CP553_12600;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000132.1	Protein Homology	CDS	1	593	.	+	2	ID=cds-CP553_RS12195;Parent=gene-CP553_RS12195;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=593,.;gbkey=CDS;gene=gdpP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498622.1;locus_tag=CP553_RS12195;partial=true;product=cyclic-di-AMP phosphodiesterase GdpP;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000133.1 1 588
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000133.1	RefSeq	region	1	588	.	+	.	ID=NZ_PCFD01000133.1:1..588;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000133.1	RefSeq	pseudogene	1	253	.	-	.	ID=gene-CP553_RS12200;Name=CP553_RS12200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12200;old_locus_tag=CP553_12605;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000133.1	Protein Homology	CDS	1	253	.	-	0	ID=cds-CP553_RS12200;Parent=gene-CP553_RS12200;Note=internal stop%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000185675.1;locus_tag=CP553_RS12200;partial=true;product=dUTPase;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000133.1	RefSeq	gene	246	494	.	-	.	ID=gene-CP553_RS12205;Name=higB;gbkey=Gene;gene=higB;gene_biotype=protein_coding;locus_tag=CP553_RS12205;old_locus_tag=CP553_12610
NZ_PCFD01000133.1	Protein Homology	CDS	246	494	.	-	0	ID=cds-WP_001065072.1;Parent=gene-CP553_RS12205;Dbxref=GenBank:WP_001065072.1;Name=WP_001065072.1;gbkey=CDS;gene=higB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015974517.1;locus_tag=CP553_RS12205;product=type II toxin-antitoxin system toxin HigB;protein_id=WP_001065072.1;transl_table=11
##sequence-region NZ_PCFD01000134.1 1 585
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000134.1	RefSeq	region	1	585	.	+	.	ID=NZ_PCFD01000134.1:1..585;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000134.1	RefSeq	pseudogene	1	585	.	-	.	ID=gene-CP553_RS12210;Name=CP553_RS12210;end_range=585,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12210;old_locus_tag=CP553_12615;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000134.1	Protein Homology	CDS	1	585	.	-	1	ID=cds-CP553_RS12210;Parent=gene-CP553_RS12210;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=585,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499453.1;locus_tag=CP553_RS12210;partial=true;product=glucose-6-phosphate isomerase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000135.1 1 585
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000135.1	RefSeq	region	1	585	.	+	.	ID=NZ_PCFD01000135.1:1..585;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000135.1	RefSeq	gene	48	146	.	-	.	ID=gene-CP553_RS12215;Name=CP553_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12215;old_locus_tag=CP553_12620
NZ_PCFD01000135.1	Protein Homology	CDS	48	146	.	-	0	ID=cds-WP_000990056.1;Parent=gene-CP553_RS12215;Dbxref=GenBank:WP_000990056.1;Name=WP_000990056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500647.1;locus_tag=CP553_RS12215;product=Trp-rich small protein;protein_id=WP_000990056.1;transl_table=11
NZ_PCFD01000135.1	RefSeq	pseudogene	346	585	.	+	.	ID=gene-CP553_RS12220;Name=CP553_RS12220;end_range=585,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12220;old_locus_tag=CP553_12625;partial=true;pseudo=true
NZ_PCFD01000135.1	Protein Homology	CDS	346	585	.	+	0	ID=cds-CP553_RS12220;Parent=gene-CP553_RS12220;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=585,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500648.1;locus_tag=CP553_RS12220;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000136.1 1 585
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000136.1	RefSeq	region	1	585	.	+	.	ID=NZ_PCFD01000136.1:1..585;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000136.1	RefSeq	gene	1	585	.	+	.	ID=gene-CP553_RS12225;Name=CP553_RS12225;end_range=585,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12225;old_locus_tag=CP553_12630;partial=true;start_range=.,1
NZ_PCFD01000136.1	Protein Homology	CDS	1	585	.	+	2	ID=cds-WP_269436773.1;Parent=gene-CP553_RS12225;Dbxref=GenBank:WP_269436773.1;Name=WP_269436773.1;Ontology_term=GO:0030976;end_range=585,.;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500764.1;locus_tag=CP553_RS12225;partial=true;product=thiamine pyrophosphate-binding protein;protein_id=WP_269436773.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000137.1 1 584
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000137.1	RefSeq	region	1	584	.	+	.	ID=NZ_PCFD01000137.1:1..584;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000137.1	RefSeq	gene	1	584	.	-	.	ID=gene-CP553_RS12230;Name=CP553_RS12230;end_range=584,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12230;old_locus_tag=CP553_12635;partial=true;start_range=.,1
NZ_PCFD01000137.1	GeneMarkS-2+	CDS	1	584	.	-	0	ID=cds-WP_331461773.1;Parent=gene-CP553_RS12230;Dbxref=GenBank:WP_331461773.1;Name=WP_331461773.1;end_range=584,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS12230;partial=true;product=hypothetical protein;protein_id=WP_331461773.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000138.1 1 579
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000138.1	RefSeq	region	1	579	.	+	.	ID=NZ_PCFD01000138.1:1..579;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000138.1	RefSeq	gene	1	579	.	+	.	ID=gene-CP553_RS12235;Name=CP553_RS12235;end_range=579,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12235;old_locus_tag=CP553_12640;partial=true;start_range=.,1
NZ_PCFD01000138.1	Protein Homology	CDS	1	579	.	+	2	ID=cds-WP_231647064.1;Parent=gene-CP553_RS12235;Dbxref=GenBank:WP_231647064.1;Name=WP_231647064.1;Ontology_term=GO:0016032,GO:0005198;end_range=579,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500042.1;locus_tag=CP553_RS12235;partial=true;product=phage tail tape measure protein;protein_id=WP_231647064.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000139.1 1 579
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000139.1	RefSeq	region	1	579	.	+	.	ID=NZ_PCFD01000139.1:1..579;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000139.1	RefSeq	gene	1	174	.	-	.	ID=gene-CP553_RS12245;Name=CP553_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12245;old_locus_tag=CP553_12645;partial=true;start_range=.,1
NZ_PCFD01000139.1	Protein Homology	CDS	1	174	.	-	0	ID=cds-WP_116843050.1;Parent=gene-CP553_RS12245;Dbxref=GenBank:WP_116843050.1;Name=WP_116843050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500073.1;locus_tag=CP553_RS12245;partial=true;product=hypothetical protein;protein_id=WP_116843050.1;start_range=.,1;transl_table=11
NZ_PCFD01000139.1	RefSeq	gene	189	437	.	-	.	ID=gene-CP553_RS12250;Name=CP553_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12250;old_locus_tag=CP553_12650
NZ_PCFD01000139.1	Protein Homology	CDS	189	437	.	-	0	ID=cds-WP_015968801.1;Parent=gene-CP553_RS12250;Dbxref=GenBank:WP_015968801.1;Name=WP_015968801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500553.1;locus_tag=CP553_RS12250;product=phi PVL orf 51-like protein;protein_id=WP_015968801.1;transl_table=11
NZ_PCFD01000139.1	RefSeq	gene	446	579	.	-	.	ID=gene-CP553_RS12860;Name=CP553_RS12860;end_range=579,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12860;old_locus_tag=CP553_12655;partial=true
NZ_PCFD01000139.1	Protein Homology	CDS	446	579	.	-	2	ID=cds-WP_231647065.1;Parent=gene-CP553_RS12860;Dbxref=GenBank:WP_231647065.1;Name=WP_231647065.1;end_range=579,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500075.1;locus_tag=CP553_RS12860;partial=true;product=hypothetical protein;protein_id=WP_231647065.1;transl_table=11
##sequence-region NZ_PCFD01000140.1 1 579
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000140.1	RefSeq	region	1	579	.	+	.	ID=NZ_PCFD01000140.1:1..579;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000140.1	RefSeq	gene	1	424	.	-	.	ID=gene-CP553_RS12255;Name=CP553_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12255;old_locus_tag=CP553_12660;partial=true;start_range=.,1
NZ_PCFD01000140.1	Protein Homology	CDS	1	424	.	-	0	ID=cds-WP_231647066.1;Parent=gene-CP553_RS12255;Dbxref=GenBank:WP_231647066.1;Name=WP_231647066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501200.1;locus_tag=CP553_RS12255;partial=true;product=2-dehydropantoate 2-reductase N-terminal domain-containing protein;protein_id=WP_231647066.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000141.1 1 555
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000141.1	RefSeq	region	1	555	.	+	.	ID=NZ_PCFD01000141.1:1..555;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000142.1 1 573
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000142.1	RefSeq	region	1	573	.	+	.	ID=NZ_PCFD01000142.1:1..573;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000142.1	RefSeq	gene	1	306	.	-	.	ID=gene-CP553_RS12270;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=CP553_RS12270;old_locus_tag=CP553_12675;partial=true;start_range=.,1
NZ_PCFD01000142.1	Protein Homology	CDS	1	306	.	-	0	ID=cds-WP_050443249.1;Parent=gene-CP553_RS12270;Dbxref=GenBank:WP_050443249.1;Name=WP_050443249.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501145.1;locus_tag=CP553_RS12270;partial=true;product=nitrite reductase small subunit NirD;protein_id=WP_050443249.1;start_range=.,1;transl_table=11
NZ_PCFD01000142.1	RefSeq	pseudogene	310	573	.	-	.	ID=gene-CP553_RS12275;Name=CP553_RS12275;end_range=573,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12275;old_locus_tag=CP553_12680;partial=true;pseudo=true
NZ_PCFD01000142.1	Protein Homology	CDS	310	573	.	-	0	ID=cds-CP553_RS12275;Parent=gene-CP553_RS12275;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=573,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501146.1;locus_tag=CP553_RS12275;partial=true;product=nitrite reductase large subunit;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000143.1 1 569
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000143.1	RefSeq	region	1	569	.	+	.	ID=NZ_PCFD01000143.1:1..569;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000143.1	RefSeq	gene	1	569	.	-	.	ID=gene-CP553_RS12280;Name=CP553_RS12280;end_range=569,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12280;old_locus_tag=CP553_12685;partial=true;start_range=.,1
NZ_PCFD01000143.1	Protein Homology	CDS	1	569	.	-	0	ID=cds-WP_197315240.1;Parent=gene-CP553_RS12280;Dbxref=GenBank:WP_197315240.1;Name=WP_197315240.1;Ontology_term=GO:0016799;end_range=569,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498806.1;locus_tag=CP553_RS12280;partial=true;product=nucleoside hydrolase;protein_id=WP_197315240.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000144.1 1 569
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000144.1	RefSeq	region	1	569	.	+	.	ID=NZ_PCFD01000144.1:1..569;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000144.1	RefSeq	pseudogene	1	569	.	+	.	ID=gene-CP553_RS12285;Name=CP553_RS12285;end_range=569,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12285;old_locus_tag=CP553_12690;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000144.1	Protein Homology	CDS	1	569	.	+	2	ID=cds-CP553_RS12285;Parent=gene-CP553_RS12285;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0006508,GO:0004177;end_range=569,.;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500584.1;locus_tag=CP553_RS12285;partial=true;product=aminopeptidase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000145.1 1 569
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000145.1	RefSeq	region	1	569	.	+	.	ID=NZ_PCFD01000145.1:1..569;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000145.1	RefSeq	gene	1	569	.	-	.	ID=gene-CP553_RS12290;Name=CP553_RS12290;end_range=569,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12290;old_locus_tag=CP553_12695;partial=true;start_range=.,1
NZ_PCFD01000145.1	Protein Homology	CDS	1	569	.	-	2	ID=cds-WP_197315241.1;Parent=gene-CP553_RS12290;Dbxref=GenBank:WP_197315241.1;Name=WP_197315241.1;Ontology_term=GO:0030655,GO:0008800;end_range=569,.;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499206.1;locus_tag=CP553_RS12290;partial=true;product=serine hydrolase;protein_id=WP_197315241.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000146.1 1 567
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000146.1	RefSeq	region	1	567	.	+	.	ID=NZ_PCFD01000146.1:1..567;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000146.1	RefSeq	pseudogene	23	567	.	+	.	ID=gene-CP553_RS12295;Name=CP553_RS12295;end_range=567,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12295;old_locus_tag=CP553_12700;partial=true;pseudo=true
NZ_PCFD01000146.1	Protein Homology	CDS	23	567	.	+	0	ID=cds-CP553_RS12295;Parent=gene-CP553_RS12295;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437509.1;locus_tag=CP553_RS12295;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000147.1 1 546
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000147.1	RefSeq	region	1	546	.	+	.	ID=NZ_PCFD01000147.1:1..546;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000148.1 1 565
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000148.1	RefSeq	region	1	565	.	+	.	ID=NZ_PCFD01000148.1:1..565;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000148.1	RefSeq	gene	1	565	.	+	.	ID=gene-CP553_RS12305;Name=CP553_RS12305;end_range=565,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12305;old_locus_tag=CP553_12710;partial=true;start_range=.,1
NZ_PCFD01000148.1	Protein Homology	CDS	1	565	.	+	2	ID=cds-WP_116843052.1;Parent=gene-CP553_RS12305;Dbxref=GenBank:WP_116843052.1;Name=WP_116843052.1;end_range=565,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501429.1;locus_tag=CP553_RS12305;partial=true;product=CHAP domain-containing protein;protein_id=WP_116843052.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000149.1 1 561
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000149.1	RefSeq	region	1	561	.	+	.	ID=NZ_PCFD01000149.1:1..561;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000150.1 1 560
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000150.1	RefSeq	region	1	560	.	+	.	ID=NZ_PCFD01000150.1:1..560;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000150.1	RefSeq	gene	1	523	.	-	.	ID=gene-CP553_RS12315;Name=CP553_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12315;old_locus_tag=CP553_12720;partial=true;start_range=.,1
NZ_PCFD01000150.1	Protein Homology	CDS	1	523	.	-	0	ID=cds-WP_116843053.1;Parent=gene-CP553_RS12315;Dbxref=GenBank:WP_116843053.1;Name=WP_116843053.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499036.1;locus_tag=CP553_RS12315;partial=true;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_116843053.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000151.1 1 560
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000151.1	RefSeq	region	1	560	.	+	.	ID=NZ_PCFD01000151.1:1..560;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000151.1	RefSeq	gene	1	560	.	-	.	ID=gene-CP553_RS12320;Name=CP553_RS12320;end_range=560,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12320;old_locus_tag=CP553_12725;partial=true;start_range=.,1
NZ_PCFD01000151.1	Protein Homology	CDS	1	560	.	-	1	ID=cds-WP_116843054.1;Parent=gene-CP553_RS12320;Dbxref=GenBank:WP_116843054.1;Name=WP_116843054.1;Ontology_term=GO:0046496,GO:0005524,GO:0047453,GO:0052855;end_range=560,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent NAD(P)H-hydrate dehydratase activity|0047453||IEA,ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;go_process=nicotinamide nucleotide metabolic process|0046496||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461649.1;locus_tag=CP553_RS12320;partial=true;product=ATP-dependent (S)-NAD(P)H-hydrate dehydratase;protein_id=WP_116843054.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000152.1 1 559
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000152.1	RefSeq	region	1	559	.	+	.	ID=NZ_PCFD01000152.1:1..559;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000152.1	RefSeq	gene	1	392	.	+	.	ID=gene-CP553_RS12325;Name=CP553_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12325;old_locus_tag=CP553_12730;partial=true;start_range=.,1
NZ_PCFD01000152.1	Protein Homology	CDS	1	392	.	+	2	ID=cds-WP_331461775.1;Parent=gene-CP553_RS12325;Dbxref=GenBank:WP_331461775.1;Name=WP_331461775.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=CP553_RS12325;partial=true;product=peptide chain release factor-like protein;protein_id=WP_331461775.1;start_range=.,1;transl_table=11
NZ_PCFD01000152.1	RefSeq	pseudogene	379	559	.	+	.	ID=gene-CP553_RS12330;Name=CP553_RS12330;end_range=559,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12330;old_locus_tag=CP553_12735;partial=true;pseudo=true
NZ_PCFD01000152.1	Protein Homology	CDS	379	559	.	+	0	ID=cds-CP553_RS12330;Parent=gene-CP553_RS12330;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248725.1;locus_tag=CP553_RS12330;partial=true;product=peptide chain release factor N(5)-glutamine methyltransferase;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000153.1 1 559
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000153.1	RefSeq	region	1	559	.	+	.	ID=NZ_PCFD01000153.1:1..559;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000153.1	RefSeq	gene	1	559	.	-	.	ID=gene-CP553_RS12335;Name=CP553_RS12335;end_range=559,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12335;old_locus_tag=CP553_12740;partial=true;start_range=.,1
NZ_PCFD01000153.1	Protein Homology	CDS	1	559	.	-	0	ID=cds-WP_331461776.1;Parent=gene-CP553_RS12335;Dbxref=GenBank:WP_331461776.1;Name=WP_331461776.1;end_range=559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467566.1;locus_tag=CP553_RS12335;partial=true;product=hypothetical protein;protein_id=WP_331461776.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000154.1 1 559
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000154.1	RefSeq	region	1	559	.	+	.	ID=NZ_PCFD01000154.1:1..559;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000154.1	RefSeq	gene	1	559	.	-	.	ID=gene-CP553_RS12340;Name=CP553_RS12340;end_range=559,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12340;old_locus_tag=CP553_12745;partial=true;start_range=.,1
NZ_PCFD01000154.1	Protein Homology	CDS	1	559	.	-	0	ID=cds-WP_331461777.1;Parent=gene-CP553_RS12340;Dbxref=GenBank:WP_331461777.1;Name=WP_331461777.1;end_range=559,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467566.1;locus_tag=CP553_RS12340;partial=true;product=hypothetical protein;protein_id=WP_331461777.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000155.1 1 558
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000155.1	RefSeq	region	1	558	.	+	.	ID=NZ_PCFD01000155.1:1..558;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000155.1	RefSeq	gene	1	558	.	+	.	ID=gene-CP553_RS12345;Name=CP553_RS12345;end_range=558,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12345;old_locus_tag=CP553_12750;partial=true;start_range=.,1
NZ_PCFD01000155.1	Protein Homology	CDS	1	558	.	+	0	ID=cds-WP_133230838.1;Parent=gene-CP553_RS12345;Dbxref=GenBank:WP_133230838.1;Name=WP_133230838.1;end_range=558,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501382.1;locus_tag=CP553_RS12345;partial=true;product=AMP-binding protein;protein_id=WP_133230838.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000156.1 1 557
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000156.1	RefSeq	region	1	557	.	+	.	ID=NZ_PCFD01000156.1:1..557;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000156.1	RefSeq	pseudogene	1	557	.	-	.	ID=gene-CP553_RS12350;Name=crtQ;end_range=557,.;gbkey=Gene;gene=crtQ;gene_biotype=pseudogene;locus_tag=CP553_RS12350;old_locus_tag=CP553_12755;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000156.1	Protein Homology	CDS	1	557	.	-	1	ID=cds-CP553_RS12350;Parent=gene-CP553_RS12350;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=557,.;gbkey=CDS;gene=crtQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501334.1;locus_tag=CP553_RS12350;partial=true;product=4%2C4'-diaponeurosporenoate glycosyltransferase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000157.1 1 553
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000157.1	RefSeq	region	1	553	.	+	.	ID=NZ_PCFD01000157.1:1..553;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000157.1	RefSeq	pseudogene	1	553	.	+	.	ID=gene-CP553_RS12355;Name=CP553_RS12355;end_range=553,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12355;old_locus_tag=CP553_12760;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000157.1	Protein Homology	CDS	1	553	.	+	0	ID=cds-CP553_RS12355;Parent=gene-CP553_RS12355;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=553,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499584.1;locus_tag=CP553_RS12355;partial=true;product=ribonuclease J;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000158.1 1 552
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000158.1	RefSeq	region	1	552	.	+	.	ID=NZ_PCFD01000158.1:1..552;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000158.1	RefSeq	pseudogene	1	552	.	-	.	ID=gene-CP553_RS12360;Name=CP553_RS12360;end_range=552,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12360;old_locus_tag=CP553_12765;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000158.1	Protein Homology	CDS	1	552	.	-	2	ID=cds-CP553_RS12360;Parent=gene-CP553_RS12360;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=552,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500838.1;locus_tag=CP553_RS12360;partial=true;product=NACHT domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000159.1 1 552
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000159.1	RefSeq	region	1	552	.	+	.	ID=NZ_PCFD01000159.1:1..552;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000159.1	RefSeq	gene	53	552	.	+	.	ID=gene-CP553_RS12365;Name=CP553_RS12365;end_range=552,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12365;old_locus_tag=CP553_12770;partial=true
NZ_PCFD01000159.1	Protein Homology	CDS	53	552	.	+	0	ID=cds-WP_116843056.1;Parent=gene-CP553_RS12365;Dbxref=GenBank:WP_116843056.1;Name=WP_116843056.1;Ontology_term=GO:0016491;end_range=552,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501325.1;locus_tag=CP553_RS12365;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_116843056.1;transl_table=11
##sequence-region NZ_PCFD01000160.1 1 550
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000160.1	RefSeq	region	1	550	.	+	.	ID=NZ_PCFD01000160.1:1..550;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000160.1	RefSeq	pseudogene	1	550	.	-	.	ID=gene-CP553_RS12370;Name=CP553_RS12370;end_range=550,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12370;old_locus_tag=CP553_12775;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000160.1	Protein Homology	CDS	1	550	.	-	0	ID=cds-CP553_RS12370;Parent=gene-CP553_RS12370;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=550,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000794614.1;locus_tag=CP553_RS12370;partial=true;product=fibronectin-binding protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000161.1 1 545
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000161.1	RefSeq	region	1	545	.	+	.	ID=NZ_PCFD01000161.1:1..545;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000162.1 1 545
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000162.1	RefSeq	region	1	545	.	+	.	ID=NZ_PCFD01000162.1:1..545;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000162.1	RefSeq	pseudogene	1	545	.	+	.	ID=gene-CP553_RS12380;Name=lytM;end_range=545,.;gbkey=Gene;gene=lytM;gene_biotype=pseudogene;locus_tag=CP553_RS12380;old_locus_tag=CP553_12785;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000162.1	Protein Homology	CDS	1	545	.	+	0	ID=cds-CP553_RS12380;Parent=gene-CP553_RS12380;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=545,.;gbkey=CDS;gene=lytM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498843.1;locus_tag=CP553_RS12380;partial=true;product=glycine-glycine endopeptidase LytM;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000163.1 1 544
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000163.1	RefSeq	region	1	544	.	+	.	ID=NZ_PCFD01000163.1:1..544;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000163.1	RefSeq	gene	1	544	.	-	.	ID=gene-CP553_RS12385;Name=CP553_RS12385;end_range=544,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12385;old_locus_tag=CP553_12790;partial=true;start_range=.,1
NZ_PCFD01000163.1	Protein Homology	CDS	1	544	.	-	1	ID=cds-WP_269436776.1;Parent=gene-CP553_RS12385;Dbxref=GenBank:WP_269436776.1;Name=WP_269436776.1;Ontology_term=GO:0016624;end_range=544,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=CP553_RS12385;partial=true;product=thiamine pyrophosphate-dependent enzyme;protein_id=WP_269436776.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000164.1 1 542
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000164.1	RefSeq	region	1	542	.	+	.	ID=NZ_PCFD01000164.1:1..542;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000164.1	RefSeq	gene	1	542	.	-	.	ID=gene-CP553_RS12390;Name=CP553_RS12390;end_range=542,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12390;old_locus_tag=CP553_12795;partial=true;start_range=.,1
NZ_PCFD01000164.1	Protein Homology	CDS	1	542	.	-	0	ID=cds-WP_133230847.1;Parent=gene-CP553_RS12390;Dbxref=GenBank:WP_133230847.1;Name=WP_133230847.1;end_range=542,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109401.1;locus_tag=CP553_RS12390;partial=true;product=hypothetical protein;protein_id=WP_133230847.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000165.1 1 541
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000165.1	RefSeq	region	1	541	.	+	.	ID=NZ_PCFD01000165.1:1..541;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000166.1 1 539
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000166.1	RefSeq	region	1	539	.	+	.	ID=NZ_PCFD01000166.1:1..539;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000166.1	RefSeq	gene	1	539	.	+	.	ID=gene-CP553_RS12400;Name=CP553_RS12400;end_range=539,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12400;old_locus_tag=CP553_12805;partial=true;start_range=.,1
NZ_PCFD01000166.1	Protein Homology	CDS	1	539	.	+	2	ID=cds-WP_116843057.1;Parent=gene-CP553_RS12400;Dbxref=GenBank:WP_116843057.1;Name=WP_116843057.1;Ontology_term=GO:0016491,GO:0046872;end_range=539,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498713.1;locus_tag=CP553_RS12400;partial=true;product=iron-containing alcohol dehydrogenase;protein_id=WP_116843057.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000167.1 1 539
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000167.1	RefSeq	region	1	539	.	+	.	ID=NZ_PCFD01000167.1:1..539;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000167.1	RefSeq	pseudogene	1	539	.	+	.	ID=gene-CP553_RS12405;Name=CP553_RS12405;end_range=539,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12405;old_locus_tag=CP553_12810;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000167.1	Protein Homology	CDS	1	539	.	+	0	ID=cds-CP553_RS12405;Parent=gene-CP553_RS12405;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=539,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000586397.1;locus_tag=CP553_RS12405;partial=true;product=FUSC family protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000168.1 1 537
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000168.1	RefSeq	region	1	537	.	+	.	ID=NZ_PCFD01000168.1:1..537;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000168.1	RefSeq	gene	1	537	.	+	.	ID=gene-CP553_RS12410;Name=CP553_RS12410;end_range=537,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12410;old_locus_tag=CP553_12815;partial=true;start_range=.,1
NZ_PCFD01000168.1	Protein Homology	CDS	1	537	.	+	0	ID=cds-WP_057504637.1;Parent=gene-CP553_RS12410;Dbxref=GenBank:WP_057504637.1;Name=WP_057504637.1;Ontology_term=GO:0004803;end_range=537,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558285.1;locus_tag=CP553_RS12410;partial=true;product=IS3 family transposase;protein_id=WP_057504637.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000169.1 1 536
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000169.1	RefSeq	region	1	536	.	+	.	ID=NZ_PCFD01000169.1:1..536;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000169.1	RefSeq	gene	1	536	.	+	.	ID=gene-CP553_RS12415;Name=CP553_RS12415;end_range=536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12415;old_locus_tag=CP553_12820;partial=true;start_range=.,1
NZ_PCFD01000169.1	Protein Homology	CDS	1	536	.	+	2	ID=cds-WP_165798634.1;Parent=gene-CP553_RS12415;Dbxref=GenBank:WP_165798634.1;Name=WP_165798634.1;Ontology_term=GO:0006260,GO:0003678,GO:0005524;end_range=536,.;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498624.1;locus_tag=CP553_RS12415;partial=true;product=DnaB-like helicase C-terminal domain-containing protein;protein_id=WP_165798634.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000170.1 1 536
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000170.1	RefSeq	region	1	536	.	+	.	ID=NZ_PCFD01000170.1:1..536;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000170.1	RefSeq	gene	1	332	.	-	.	ID=gene-CP553_RS12420;Name=CP553_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12420;old_locus_tag=CP553_12825;partial=true;start_range=.,1
NZ_PCFD01000170.1	Protein Homology	CDS	1	332	.	-	0	ID=cds-WP_438944515.1;Parent=gene-CP553_RS12420;Dbxref=GenBank:WP_438944515.1;Name=WP_438944515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=CP553_RS12420;partial=true;product=glutamine amidotransferase-related protein;protein_id=WP_438944515.1;start_range=.,1;transl_table=11
NZ_PCFD01000170.1	RefSeq	gene	357	536	.	-	.	ID=gene-CP553_RS12425;Name=CP553_RS12425;end_range=536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12425;old_locus_tag=CP553_12830;partial=true
NZ_PCFD01000170.1	Protein Homology	CDS	357	536	.	-	0	ID=cds-WP_197315245.1;Parent=gene-CP553_RS12425;Dbxref=GenBank:WP_197315245.1;Name=WP_197315245.1;Ontology_term=GO:0003824;end_range=536,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=CP553_RS12425;partial=true;product=IMP dehydrogenase;protein_id=WP_197315245.1;transl_table=11
##sequence-region NZ_PCFD01000171.1 1 536
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000171.1	RefSeq	region	1	536	.	+	.	ID=NZ_PCFD01000171.1:1..536;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000171.1	RefSeq	gene	1	536	.	-	.	ID=gene-CP553_RS12430;Name=CP553_RS12430;end_range=536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12430;old_locus_tag=CP553_12835;partial=true;start_range=.,1
NZ_PCFD01000171.1	Protein Homology	CDS	1	536	.	-	2	ID=cds-WP_133230850.1;Parent=gene-CP553_RS12430;Dbxref=GenBank:WP_133230850.1;Name=WP_133230850.1;end_range=536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109320.1;locus_tag=CP553_RS12430;partial=true;product=GA module-containing protein;protein_id=WP_133230850.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000172.1 1 535
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000172.1	RefSeq	region	1	535	.	+	.	ID=NZ_PCFD01000172.1:1..535;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000173.1 1 530
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000173.1	RefSeq	region	1	530	.	+	.	ID=NZ_PCFD01000173.1:1..530;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000173.1	RefSeq	gene	1	502	.	-	.	ID=gene-CP553_RS12440;Name=CP553_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12440;old_locus_tag=CP553_12845;partial=true;start_range=.,1
NZ_PCFD01000173.1	Protein Homology	CDS	1	502	.	-	0	ID=cds-WP_231647069.1;Parent=gene-CP553_RS12440;Dbxref=GenBank:WP_231647069.1;Name=WP_231647069.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501426.1;locus_tag=CP553_RS12440;partial=true;product=PTS fructose transporter subunit IIB;protein_id=WP_231647069.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000174.1 1 529
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000174.1	RefSeq	region	1	529	.	+	.	ID=NZ_PCFD01000174.1:1..529;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000175.1 1 529
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000175.1	RefSeq	region	1	529	.	+	.	ID=NZ_PCFD01000175.1:1..529;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000175.1	RefSeq	pseudogene	1	482	.	+	.	ID=gene-CP553_RS12450;Name=CP553_RS12450;end_range=482,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12450;old_locus_tag=CP553_12855;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000175.1	Protein Homology	CDS	1	482	.	+	2	ID=cds-CP553_RS12450;Parent=gene-CP553_RS12450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006508,GO:0008233,GO:0016787;end_range=482,.;gbkey=CDS;go_function=peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000768374.1;locus_tag=CP553_RS12450;partial=true;product=C40 family peptidase;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000176.1 1 527
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000176.1	RefSeq	region	1	527	.	+	.	ID=NZ_PCFD01000176.1:1..527;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000176.1	RefSeq	gene	1	527	.	+	.	ID=gene-CP553_RS12455;Name=CP553_RS12455;end_range=527,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12455;old_locus_tag=CP553_12860;partial=true;start_range=.,1
NZ_PCFD01000176.1	Protein Homology	CDS	1	527	.	+	0	ID=cds-WP_369123261.1;Parent=gene-CP553_RS12455;Dbxref=GenBank:WP_369123261.1;Name=WP_369123261.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;end_range=527,.;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499979.1;locus_tag=CP553_RS12455;partial=true;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_369123261.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000177.1 1 526
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000177.1	RefSeq	region	1	526	.	+	.	ID=NZ_PCFD01000177.1:1..526;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000177.1	RefSeq	gene	1	526	.	+	.	ID=gene-CP553_RS12460;Name=CP553_RS12460;end_range=526,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12460;old_locus_tag=CP553_12865;partial=true;start_range=.,1
NZ_PCFD01000177.1	Protein Homology	CDS	1	526	.	+	0	ID=cds-WP_116843059.1;Parent=gene-CP553_RS12460;Dbxref=GenBank:WP_116843059.1;Name=WP_116843059.1;end_range=526,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498899.1;locus_tag=CP553_RS12460;partial=true;product=NAD(P)H-binding protein;protein_id=WP_116843059.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000178.1 1 525
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000178.1	RefSeq	region	1	525	.	+	.	ID=NZ_PCFD01000178.1:1..525;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000179.1 1 524
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000179.1	RefSeq	region	1	524	.	+	.	ID=NZ_PCFD01000179.1:1..524;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000179.1	RefSeq	gene	1	523	.	-	.	ID=gene-CP553_RS12465;Name=CP553_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12465;old_locus_tag=CP553_12875;partial=true;start_range=.,1
NZ_PCFD01000179.1	Protein Homology	CDS	1	523	.	-	0	ID=cds-WP_165798635.1;Parent=gene-CP553_RS12465;Dbxref=GenBank:WP_165798635.1;Name=WP_165798635.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832339.1;locus_tag=CP553_RS12465;partial=true;product=PTS transporter subunit EIIC;protein_id=WP_165798635.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000180.1 1 523
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000180.1	RefSeq	region	1	523	.	+	.	ID=NZ_PCFD01000180.1:1..523;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000180.1	RefSeq	pseudogene	1	180	.	+	.	ID=gene-CP553_RS12470;Name=mepR;gbkey=Gene;gene=mepR;gene_biotype=pseudogene;locus_tag=CP553_RS12470;old_locus_tag=CP553_12880;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000180.1	Protein Homology	CDS	1	180	.	+	0	ID=cds-CP553_RS12470;Parent=gene-CP553_RS12470;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=mepR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498904.1;locus_tag=CP553_RS12470;partial=true;product=multidrug efflux transporter transcriptional repressor MepR;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000180.1	RefSeq	pseudogene	287	523	.	+	.	ID=gene-CP553_RS12475;Name=CP553_RS12475;end_range=523,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12475;old_locus_tag=CP553_12885;partial=true;pseudo=true
NZ_PCFD01000180.1	Protein Homology	CDS	287	523	.	+	0	ID=cds-CP553_RS12475;Parent=gene-CP553_RS12475;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=523,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498905.1;locus_tag=CP553_RS12475;partial=true;product=MATE family efflux transporter;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000181.1 1 521
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000181.1	RefSeq	region	1	521	.	+	.	ID=NZ_PCFD01000181.1:1..521;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000182.1 1 521
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000182.1	RefSeq	region	1	521	.	+	.	ID=NZ_PCFD01000182.1:1..521;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000182.1	RefSeq	gene	1	511	.	+	.	ID=gene-CP553_RS12485;Name=CP553_RS12485;gbkey=Gene;gene_biotype=rRNA;locus_tag=CP553_RS12485;old_locus_tag=CP553_12895;partial=true;start_range=.,1
NZ_PCFD01000182.1	cmsearch	rRNA	1	511	.	+	.	ID=rna-CP553_RS12485;Parent=gene-CP553_RS12485;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS12485;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_PCFD01000182.1	cmsearch	exon	1	511	.	+	.	ID=exon-CP553_RS12485-1;Parent=rna-CP553_RS12485;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=CP553_RS12485;partial=true;product=16S ribosomal RNA;start_range=.,1
##sequence-region NZ_PCFD01000183.1 1 520
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000183.1	RefSeq	region	1	520	.	+	.	ID=NZ_PCFD01000183.1:1..520;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000183.1	RefSeq	gene	1	520	.	-	.	ID=gene-CP553_RS12490;Name=CP553_RS12490;end_range=520,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12490;old_locus_tag=CP553_12900;partial=true;start_range=.,1
NZ_PCFD01000183.1	Protein Homology	CDS	1	520	.	-	0	ID=cds-WP_197315246.1;Parent=gene-CP553_RS12490;Dbxref=GenBank:WP_197315246.1;Name=WP_197315246.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;end_range=520,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000364852.1;locus_tag=CP553_RS12490;partial=true;product=PTS sugar transporter subunit IIC;protein_id=WP_197315246.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000184.1 1 520
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000184.1	RefSeq	region	1	520	.	+	.	ID=NZ_PCFD01000184.1:1..520;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000184.1	RefSeq	gene	1	520	.	+	.	ID=gene-CP553_RS12495;Name=CP553_RS12495;end_range=520,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12495;old_locus_tag=CP553_12905;partial=true;start_range=.,1
NZ_PCFD01000184.1	Protein Homology	CDS	1	520	.	+	0	ID=cds-WP_133230853.1;Parent=gene-CP553_RS12495;Dbxref=GenBank:WP_133230853.1;Name=WP_133230853.1;end_range=520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500376.1;locus_tag=CP553_RS12495;partial=true;product=DUF1542 domain-containing protein;protein_id=WP_133230853.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000185.1 1 520
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000185.1	RefSeq	region	1	520	.	+	.	ID=NZ_PCFD01000185.1:1..520;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000185.1	RefSeq	gene	292	520	.	-	.	ID=gene-CP553_RS12500;Name=CP553_RS12500;end_range=520,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12500;old_locus_tag=CP553_12910;partial=true
NZ_PCFD01000185.1	Protein Homology	CDS	292	520	.	-	1	ID=cds-WP_133230857.1;Parent=gene-CP553_RS12500;Dbxref=GenBank:WP_133230857.1;Name=WP_133230857.1;end_range=520,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025587.6;locus_tag=CP553_RS12500;partial=true;product=2-oxoglutarate and iron-dependent oxygenase domain-containing protein;protein_id=WP_133230857.1;transl_table=11
##sequence-region NZ_PCFD01000186.1 1 517
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000186.1	RefSeq	region	1	517	.	+	.	ID=NZ_PCFD01000186.1:1..517;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000187.1 1 517
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000187.1	RefSeq	region	1	517	.	+	.	ID=NZ_PCFD01000187.1:1..517;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000187.1	RefSeq	gene	1	517	.	+	.	ID=gene-CP553_RS12510;Name=CP553_RS12510;end_range=517,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12510;old_locus_tag=CP553_12920;partial=true;start_range=.,1
NZ_PCFD01000187.1	Protein Homology	CDS	1	517	.	+	2	ID=cds-WP_133230862.1;Parent=gene-CP553_RS12510;Dbxref=GenBank:WP_133230862.1;Name=WP_133230862.1;end_range=517,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499969.1;locus_tag=CP553_RS12510;partial=true;product=GA module-containing protein;protein_id=WP_133230862.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000188.1 1 517
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000188.1	RefSeq	region	1	517	.	+	.	ID=NZ_PCFD01000188.1:1..517;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000188.1	RefSeq	pseudogene	1	122	.	+	.	ID=gene-CP553_RS12515;Name=CP553_RS12515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12515;old_locus_tag=CP553_12925;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000188.1	Protein Homology	CDS	1	122	.	+	2	ID=cds-CP553_RS12515;Parent=gene-CP553_RS12515;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500858.1;locus_tag=CP553_RS12515;partial=true;product=DNA starvation/stationary phase protection protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000188.1	RefSeq	gene	252	517	.	-	.	ID=gene-CP553_RS12520;Name=CP553_RS12520;end_range=517,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12520;old_locus_tag=CP553_12930;partial=true
NZ_PCFD01000188.1	Protein Homology	CDS	252	517	.	-	2	ID=cds-WP_438944516.1;Parent=gene-CP553_RS12520;Dbxref=GenBank:WP_438944516.1;Name=WP_438944516.1;Ontology_term=GO:0009116,GO:0003824;end_range=517,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=CP553_RS12520;partial=true;product=phosphorylase family protein;protein_id=WP_438944516.1;transl_table=11
##sequence-region NZ_PCFD01000189.1 1 516
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000189.1	RefSeq	region	1	516	.	+	.	ID=NZ_PCFD01000189.1:1..516;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000189.1	RefSeq	gene	125	516	.	-	.	ID=gene-CP553_RS12525;Name=CP553_RS12525;end_range=516,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12525;old_locus_tag=CP553_12935;partial=true
NZ_PCFD01000189.1	Protein Homology	CDS	125	516	.	-	2	ID=cds-WP_165798637.1;Parent=gene-CP553_RS12525;Dbxref=GenBank:WP_165798637.1;Name=WP_165798637.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;end_range=516,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498705.1;locus_tag=CP553_RS12525;partial=true;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WP_165798637.1;transl_table=11
##sequence-region NZ_PCFD01000190.1 1 516
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000190.1	RefSeq	region	1	516	.	+	.	ID=NZ_PCFD01000190.1:1..516;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000190.1	RefSeq	gene	1	516	.	+	.	ID=gene-CP553_RS12530;Name=CP553_RS12530;end_range=516,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12530;old_locus_tag=CP553_12940;partial=true;start_range=.,1
NZ_PCFD01000190.1	Protein Homology	CDS	1	516	.	+	2	ID=cds-WP_116843061.1;Parent=gene-CP553_RS12530;Dbxref=GenBank:WP_116843061.1;Name=WP_116843061.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;end_range=516,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_464637.1;locus_tag=CP553_RS12530;partial=true;product=FtsK/SpoIIIE domain-containing protein;protein_id=WP_116843061.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000191.1 1 514
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000191.1	RefSeq	region	1	514	.	+	.	ID=NZ_PCFD01000191.1:1..514;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000191.1	RefSeq	pseudogene	1	315	.	+	.	ID=gene-CP553_RS12535;Name=CP553_RS12535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12535;old_locus_tag=CP553_12945;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000191.1	Protein Homology	CDS	1	315	.	+	0	ID=cds-CP553_RS12535;Parent=gene-CP553_RS12535;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000111526.1;locus_tag=CP553_RS12535;partial=true;product=ParA family protein;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000191.1	RefSeq	pseudogene	325	514	.	+	.	ID=gene-CP553_RS12540;Name=CP553_RS12540;end_range=514,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12540;old_locus_tag=CP553_12950;partial=true;pseudo=true
NZ_PCFD01000191.1	Protein Homology	CDS	325	514	.	+	0	ID=cds-CP553_RS12540;Parent=gene-CP553_RS12540;Note=internal stop%3B incomplete%3B missing C-terminus;end_range=514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437031.1;locus_tag=CP553_RS12540;partial=true;product=plasmid replication-associated protein;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000192.1 1 514
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000192.1	RefSeq	region	1	514	.	+	.	ID=NZ_PCFD01000192.1:1..514;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000192.1	RefSeq	pseudogene	1	514	.	-	.	ID=gene-CP553_RS12545;Name=CP553_RS12545;end_range=514,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12545;old_locus_tag=CP553_12955;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000192.1	Protein Homology	CDS	1	514	.	-	1	ID=cds-CP553_RS12545;Parent=gene-CP553_RS12545;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;end_range=514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498743.1;locus_tag=CP553_RS12545;partial=true;product=phosphopantetheine-binding protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000193.1 1 513
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000193.1	RefSeq	region	1	513	.	+	.	ID=NZ_PCFD01000193.1:1..513;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000194.1 1 513
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000194.1	RefSeq	region	1	513	.	+	.	ID=NZ_PCFD01000194.1:1..513;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000194.1	RefSeq	gene	1	513	.	-	.	ID=gene-CP553_RS12555;Name=CP553_RS12555;end_range=513,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12555;old_locus_tag=CP553_12965;partial=true;start_range=.,1
NZ_PCFD01000194.1	GeneMarkS-2+	CDS	1	513	.	-	1	ID=cds-WP_165798638.1;Parent=gene-CP553_RS12555;Dbxref=GenBank:WP_165798638.1;Name=WP_165798638.1;end_range=513,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS12555;partial=true;product=hypothetical protein;protein_id=WP_165798638.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000195.1 1 513
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000195.1	RefSeq	region	1	513	.	+	.	ID=NZ_PCFD01000195.1:1..513;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000195.1	RefSeq	gene	1	513	.	-	.	ID=gene-CP553_RS12560;Name=CP553_RS12560;end_range=513,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12560;old_locus_tag=CP553_12970;partial=true;start_range=.,1
NZ_PCFD01000195.1	Protein Homology	CDS	1	513	.	-	2	ID=cds-WP_269436779.1;Parent=gene-CP553_RS12560;Dbxref=GenBank:WP_269436779.1;Name=WP_269436779.1;end_range=513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302760.1;locus_tag=CP553_RS12560;partial=true;product=lyase family protein;protein_id=WP_269436779.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000196.1 1 513
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000196.1	RefSeq	region	1	513	.	+	.	ID=NZ_PCFD01000196.1:1..513;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000196.1	RefSeq	pseudogene	1	149	.	-	.	ID=gene-CP553_RS12565;Name=CP553_RS12565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12565;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000196.1	Protein Homology	CDS	1	149	.	-	0	ID=cds-CP553_RS12565;Parent=gene-CP553_RS12565;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498897.1;locus_tag=CP553_RS12565;partial=true;product=deacetylase SIR2;pseudo=true;start_range=.,1;transl_table=11
NZ_PCFD01000196.1	RefSeq	gene	139	513	.	-	.	ID=gene-CP553_RS12570;Name=CP553_RS12570;end_range=513,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12570;old_locus_tag=CP553_12975;partial=true
NZ_PCFD01000196.1	Protein Homology	CDS	139	513	.	-	0	ID=cds-WP_197315248.1;Parent=gene-CP553_RS12570;Dbxref=GenBank:WP_197315248.1;Name=WP_197315248.1;end_range=513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498896.1;locus_tag=CP553_RS12570;partial=true;product=macro domain-containing protein;protein_id=WP_197315248.1;transl_table=11
##sequence-region NZ_PCFD01000197.1 1 512
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000197.1	RefSeq	region	1	512	.	+	.	ID=NZ_PCFD01000197.1:1..512;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000198.1 1 511
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000198.1	RefSeq	region	1	511	.	+	.	ID=NZ_PCFD01000198.1:1..511;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000198.1	RefSeq	gene	1	511	.	-	.	ID=gene-CP553_RS12580;Name=CP553_RS12580;end_range=511,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12580;old_locus_tag=CP553_12990;partial=true;start_range=.,1
NZ_PCFD01000198.1	GeneMarkS-2+	CDS	1	511	.	-	0	ID=cds-WP_197315249.1;Parent=gene-CP553_RS12580;Dbxref=GenBank:WP_197315249.1;Name=WP_197315249.1;end_range=511,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=CP553_RS12580;partial=true;product=hypothetical protein;protein_id=WP_197315249.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000199.1 1 511
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000199.1	RefSeq	region	1	511	.	+	.	ID=NZ_PCFD01000199.1:1..511;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000199.1	RefSeq	gene	1	211	.	-	.	ID=gene-CP553_RS12585;Name=CP553_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12585;old_locus_tag=CP553_12995;partial=true;start_range=.,1
NZ_PCFD01000199.1	Protein Homology	CDS	1	211	.	-	0	ID=cds-WP_116843064.1;Parent=gene-CP553_RS12585;Dbxref=GenBank:WP_116843064.1;Name=WP_116843064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500752.1;locus_tag=CP553_RS12585;partial=true;product=sulfurtransferase TusA family protein;protein_id=WP_116843064.1;start_range=.,1;transl_table=11
NZ_PCFD01000199.1	RefSeq	gene	271	511	.	-	.	ID=gene-CP553_RS12590;Name=CP553_RS12590;end_range=511,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12590;old_locus_tag=CP553_13000;partial=true
NZ_PCFD01000199.1	Protein Homology	CDS	271	511	.	-	1	ID=cds-WP_165798639.1;Parent=gene-CP553_RS12590;Dbxref=GenBank:WP_165798639.1;Name=WP_165798639.1;end_range=511,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000266877.1;locus_tag=CP553_RS12590;partial=true;product=YeeE/YedE thiosulfate transporter family protein;protein_id=WP_165798639.1;transl_table=11
##sequence-region NZ_PCFD01000200.1 1 511
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000200.1	RefSeq	region	1	511	.	+	.	ID=NZ_PCFD01000200.1:1..511;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000200.1	RefSeq	pseudogene	1	511	.	+	.	ID=gene-CP553_RS12595;Name=mhqE;end_range=511,.;gbkey=Gene;gene=mhqE;gene_biotype=pseudogene;locus_tag=CP553_RS12595;old_locus_tag=CP553_13005;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000200.1	Protein Homology	CDS	1	511	.	+	2	ID=cds-CP553_RS12595;Parent=gene-CP553_RS12595;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=511,.;gbkey=CDS;gene=mhqE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009560906.1;locus_tag=CP553_RS12595;partial=true;product=ring-cleaving dioxygenase MhqE;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000201.1 1 510
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000201.1	RefSeq	region	1	510	.	+	.	ID=NZ_PCFD01000201.1:1..510;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000201.1	RefSeq	gene	1	510	.	+	.	ID=gene-CP553_RS12600;Name=CP553_RS12600;end_range=510,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12600;old_locus_tag=CP553_13010;partial=true;start_range=.,1
NZ_PCFD01000201.1	Protein Homology	CDS	1	510	.	+	2	ID=cds-WP_269436780.1;Parent=gene-CP553_RS12600;Dbxref=GenBank:WP_269436780.1;Name=WP_269436780.1;Ontology_term=GO:0043093,GO:0051258,GO:0051301,GO:0003924,GO:0005525;end_range=510,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA,protein polymerization|0051258||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499692.1;locus_tag=CP553_RS12600;partial=true;product=cell division protein FtsZ;protein_id=WP_269436780.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000202.1 1 509
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000202.1	RefSeq	region	1	509	.	+	.	ID=NZ_PCFD01000202.1:1..509;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000202.1	RefSeq	gene	1	489	.	+	.	ID=gene-CP553_RS12605;Name=CP553_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12605;old_locus_tag=CP553_13015;partial=true;start_range=.,1
NZ_PCFD01000202.1	Protein Homology	CDS	1	489	.	+	0	ID=cds-WP_165798640.1;Parent=gene-CP553_RS12605;Dbxref=GenBank:WP_165798640.1;Name=WP_165798640.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498757.1;locus_tag=CP553_RS12605;partial=true;product=PTS transporter subunit EIIC;protein_id=WP_165798640.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000203.1 1 508
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000203.1	RefSeq	region	1	508	.	+	.	ID=NZ_PCFD01000203.1:1..508;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000203.1	RefSeq	gene	1	508	.	-	.	ID=gene-CP553_RS12610;Name=argS;end_range=508,.;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=CP553_RS12610;old_locus_tag=CP553_13020;partial=true;start_range=.,1
NZ_PCFD01000203.1	Protein Homology	CDS	1	508	.	-	1	ID=cds-WP_116843065.1;Parent=gene-CP553_RS12610;Dbxref=GenBank:WP_116843065.1;Name=WP_116843065.1;end_range=508,.;gbkey=CDS;gene=argS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499174.1;locus_tag=CP553_RS12610;partial=true;product=arginine--tRNA ligase domain-containing protein;protein_id=WP_116843065.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000204.1 1 508
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000204.1	RefSeq	region	1	508	.	+	.	ID=NZ_PCFD01000204.1:1..508;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000204.1	RefSeq	gene	1	476	.	-	.	ID=gene-CP553_RS12615;Name=CP553_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12615;old_locus_tag=CP553_13025;partial=true;start_range=.,1
NZ_PCFD01000204.1	Protein Homology	CDS	1	476	.	-	0	ID=cds-WP_165798641.1;Parent=gene-CP553_RS12615;Dbxref=GenBank:WP_165798641.1;Name=WP_165798641.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500900.1;locus_tag=CP553_RS12615;partial=true;product=ABC transporter substrate-binding protein;protein_id=WP_165798641.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000205.1 1 508
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000205.1	RefSeq	region	1	508	.	+	.	ID=NZ_PCFD01000205.1:1..508;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000205.1	RefSeq	gene	1	508	.	-	.	ID=gene-CP553_RS12620;Name=CP553_RS12620;end_range=508,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12620;old_locus_tag=CP553_13030;partial=true;start_range=.,1
NZ_PCFD01000205.1	Protein Homology	CDS	1	508	.	-	0	ID=cds-WP_116843066.1;Parent=gene-CP553_RS12620;Dbxref=GenBank:WP_116843066.1;Name=WP_116843066.1;Ontology_term=GO:1901135,GO:0097367;end_range=508,.;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500875.1;locus_tag=CP553_RS12620;partial=true;product=SIS domain-containing protein;protein_id=WP_116843066.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000206.1 1 508
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000206.1	RefSeq	region	1	508	.	+	.	ID=NZ_PCFD01000206.1:1..508;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000206.1	RefSeq	pseudogene	38	508	.	-	.	ID=gene-CP553_RS12625;Name=CP553_RS12625;end_range=508,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12625;old_locus_tag=CP553_13035;partial=true;pseudo=true;start_range=.,38
NZ_PCFD01000206.1	Protein Homology	CDS	38	508	.	-	0	ID=cds-CP553_RS12625;Parent=gene-CP553_RS12625;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000184136.1;locus_tag=CP553_RS12625;partial=true;product=phage minor head protein;pseudo=true;start_range=.,38;transl_table=11
##sequence-region NZ_PCFD01000207.1 1 507
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000207.1	RefSeq	region	1	507	.	+	.	ID=NZ_PCFD01000207.1:1..507;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000207.1	RefSeq	gene	1	491	.	-	.	ID=gene-CP553_RS12630;Name=CP553_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12630;old_locus_tag=CP553_13040;partial=true;start_range=.,1
NZ_PCFD01000207.1	Protein Homology	CDS	1	491	.	-	0	ID=cds-WP_197315251.1;Parent=gene-CP553_RS12630;Dbxref=GenBank:WP_197315251.1;Name=WP_197315251.1;Ontology_term=GO:0006164,GO:0000166,GO:0004019;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,adenylosuccinate synthase activity|0004019||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498625.1;locus_tag=CP553_RS12630;partial=true;product=adenylosuccinate synthetase;protein_id=WP_197315251.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000208.1 1 507
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000208.1	RefSeq	region	1	507	.	+	.	ID=NZ_PCFD01000208.1:1..507;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000208.1	RefSeq	pseudogene	1	507	.	-	.	ID=gene-CP553_RS12635;Name=CP553_RS12635;end_range=507,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12635;old_locus_tag=CP553_13045;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000208.1	Protein Homology	CDS	1	507	.	-	2	ID=cds-CP553_RS12635;Parent=gene-CP553_RS12635;Note=internal stop%3B incomplete%3B missing N-terminus and C-terminus;end_range=507,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498743.1;locus_tag=CP553_RS12635;partial=true;product=AMP-binding protein;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000209.1 1 506
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000209.1	RefSeq	region	1	506	.	+	.	ID=NZ_PCFD01000209.1:1..506;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000209.1	RefSeq	gene	1	506	.	+	.	ID=gene-CP553_RS12640;Name=CP553_RS12640;end_range=506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12640;old_locus_tag=CP553_13050;partial=true;start_range=.,1
NZ_PCFD01000209.1	Protein Homology	CDS	1	506	.	+	0	ID=cds-WP_231647070.1;Parent=gene-CP553_RS12640;Dbxref=GenBank:WP_231647070.1;Name=WP_231647070.1;end_range=506,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199895.1;locus_tag=CP553_RS12640;partial=true;product=protein rep;protein_id=WP_231647070.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000210.1 1 506
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000210.1	RefSeq	region	1	506	.	+	.	ID=NZ_PCFD01000210.1:1..506;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000210.1	RefSeq	gene	1	506	.	+	.	ID=gene-CP553_RS12645;Name=CP553_RS12645;end_range=506,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12645;old_locus_tag=CP553_13055;partial=true;start_range=.,1
NZ_PCFD01000210.1	Protein Homology	CDS	1	506	.	+	1	ID=cds-WP_231647071.1;Parent=gene-CP553_RS12645;Dbxref=GenBank:WP_231647071.1;Name=WP_231647071.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005524;end_range=506,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA,ATP binding|0005524||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500231.1;locus_tag=CP553_RS12645;partial=true;product=alanine--tRNA ligase-related protein;protein_id=WP_231647071.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000211.1 1 506
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000211.1	RefSeq	region	1	506	.	+	.	ID=NZ_PCFD01000211.1:1..506;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000211.1	RefSeq	pseudogene	1	506	.	+	.	ID=gene-CP553_RS12650;Name=sapep;end_range=506,.;gbkey=Gene;gene=sapep;gene_biotype=pseudogene;locus_tag=CP553_RS12650;old_locus_tag=CP553_13060;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000211.1	Protein Homology	CDS	1	506	.	+	0	ID=cds-CP553_RS12650;Parent=gene-CP553_RS12650;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=506,.;gbkey=CDS;gene=sapep;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500371.1;locus_tag=CP553_RS12650;partial=true;product=Mn(2+)-dependent dipeptidase Sapep;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000212.1 1 505
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000212.1	RefSeq	region	1	505	.	+	.	ID=NZ_PCFD01000212.1:1..505;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000212.1	RefSeq	gene	1	141	.	+	.	ID=gene-CP553_RS12655;Name=CP553_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12655;old_locus_tag=CP553_13065;partial=true;start_range=.,1
NZ_PCFD01000212.1	Protein Homology	CDS	1	141	.	+	0	ID=cds-WP_133230870.1;Parent=gene-CP553_RS12655;Dbxref=GenBank:WP_133230870.1;Name=WP_133230870.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501329.1;locus_tag=CP553_RS12655;partial=true;product=cation transporter;protein_id=WP_133230870.1;start_range=.,1;transl_table=11
NZ_PCFD01000212.1	RefSeq	gene	231	505	.	-	.	ID=gene-CP553_RS12660;Name=CP553_RS12660;end_range=505,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12660;old_locus_tag=CP553_13070;partial=true
NZ_PCFD01000212.1	Protein Homology	CDS	231	505	.	-	2	ID=cds-WP_269436781.1;Parent=gene-CP553_RS12660;Dbxref=GenBank:WP_269436781.1;Name=WP_269436781.1;Ontology_term=GO:0051287;end_range=505,.;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501330.1;locus_tag=CP553_RS12660;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=WP_269436781.1;transl_table=11
##sequence-region NZ_PCFD01000213.1 1 504
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000213.1	RefSeq	region	1	504	.	+	.	ID=NZ_PCFD01000213.1:1..504;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
##sequence-region NZ_PCFD01000214.1 1 503
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000214.1	RefSeq	region	1	503	.	+	.	ID=NZ_PCFD01000214.1:1..503;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000214.1	RefSeq	gene	1	503	.	+	.	ID=gene-CP553_RS12665;Name=CP553_RS12665;end_range=503,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12665;old_locus_tag=CP553_13080;partial=true;start_range=.,1
NZ_PCFD01000214.1	Protein Homology	CDS	1	503	.	+	2	ID=cds-WP_133230874.1;Parent=gene-CP553_RS12665;Dbxref=GenBank:WP_133230874.1;Name=WP_133230874.1;Ontology_term=GO:0016491;end_range=503,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499148.1;locus_tag=CP553_RS12665;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_133230874.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000215.1 1 466
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000215.1	RefSeq	region	1	466	.	+	.	ID=NZ_PCFD01000215.1:1..466;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000215.1	RefSeq	gene	1	465	.	-	.	ID=gene-CP553_RS12670;Name=CP553_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12670;old_locus_tag=CP553_13085;partial=true;start_range=.,1
NZ_PCFD01000215.1	Protein Homology	CDS	1	465	.	-	0	ID=cds-WP_231647073.1;Parent=gene-CP553_RS12670;Dbxref=GenBank:WP_231647073.1;Name=WP_231647073.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011091028.1;locus_tag=CP553_RS12670;partial=true;product=serine hydrolase;protein_id=WP_231647073.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000216.1 1 502
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000216.1	RefSeq	region	1	502	.	+	.	ID=NZ_PCFD01000216.1:1..502;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000216.1	RefSeq	gene	1	502	.	+	.	ID=gene-CP553_RS12675;Name=CP553_RS12675;end_range=502,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12675;old_locus_tag=CP553_13090;partial=true;start_range=.,1
NZ_PCFD01000216.1	Protein Homology	CDS	1	502	.	+	1	ID=cds-WP_116843067.1;Parent=gene-CP553_RS12675;Dbxref=GenBank:WP_116843067.1;Name=WP_116843067.1;end_range=502,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500219.1;locus_tag=CP553_RS12675;partial=true;product=ATP-binding protein;protein_id=WP_116843067.1;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000217.1 1 501
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000217.1	RefSeq	region	1	501	.	+	.	ID=NZ_PCFD01000217.1:1..501;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000217.1	RefSeq	pseudogene	1	501	.	+	.	ID=gene-CP553_RS12680;Name=CP553_RS12680;end_range=501,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12680;old_locus_tag=CP553_13095;partial=true;pseudo=true;start_range=.,1
NZ_PCFD01000217.1	Protein Homology	CDS	1	501	.	+	2	ID=cds-CP553_RS12680;Parent=gene-CP553_RS12680;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=501,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499096.2;locus_tag=CP553_RS12680;partial=true;product=DNA-directed RNA polymerase subunit beta;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_PCFD01000218.1 1 501
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000218.1	RefSeq	region	1	501	.	+	.	ID=NZ_PCFD01000218.1:1..501;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000218.1	RefSeq	gene	1	431	.	-	.	ID=gene-CP553_RS12685;Name=CP553_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CP553_RS12685;old_locus_tag=CP553_13100;partial=true;start_range=.,1
NZ_PCFD01000218.1	Protein Homology	CDS	1	431	.	-	0	ID=cds-WP_369123262.1;Parent=gene-CP553_RS12685;Dbxref=GenBank:WP_369123262.1;Name=WP_369123262.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500413.1;locus_tag=CP553_RS12685;partial=true;product=alpha/beta hydrolase family protein;protein_id=WP_369123262.1;start_range=.,1;transl_table=11
NZ_PCFD01000218.1	RefSeq	pseudogene	436	501	.	-	.	ID=gene-CP553_RS12690;Name=CP553_RS12690;end_range=501,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12690;partial=true;pseudo=true
NZ_PCFD01000218.1	Protein Homology	CDS	436	501	.	-	0	ID=cds-CP553_RS12690;Parent=gene-CP553_RS12690;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=501,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500414.1;locus_tag=CP553_RS12690;partial=true;product=RNA deprotection pyrophosphohydrolase;pseudo=true;transl_table=11
##sequence-region NZ_PCFD01000219.1 1 500
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_PCFD01000219.1	RefSeq	region	1	500	.	+	.	ID=NZ_PCFD01000219.1:1..500;Dbxref=taxon:1282;collection-date=2016-10;country=South Africa: Cato Ridge;gbkey=Src;genome=genomic;isolation-source=rectum;mol_type=genomic DNA;nat-host=pig;strain=PR246B0
NZ_PCFD01000219.1	RefSeq	pseudogene	431	500	.	-	.	ID=gene-CP553_RS12695;Name=CP553_RS12695;end_range=500,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CP553_RS12695;old_locus_tag=CP553_13110;partial=true;pseudo=true
NZ_PCFD01000219.1	Protein Homology	CDS	431	500	.	-	1	ID=cds-CP553_RS12695;Parent=gene-CP553_RS12695;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=500,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465312.1;locus_tag=CP553_RS12695;partial=true;product=DNA methyltransferase;pseudo=true;transl_table=11
###