##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM3184691v1
#!genome-build-accession NCBI_Assembly:GCF_031846915.1
#!annotation-date 09/25/2025 15:50:50
#!annotation-source NCBI RefSeq GCF_031846915.1-RS_2025_09_25
##sequence-region NZ_JAVRJI010000001.1 1 301808
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000001.1	RefSeq	region	1	301808	.	+	.	ID=NZ_JAVRJI010000001.1:1..301808;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000001.1	RefSeq	gene	199	513	.	-	.	ID=gene-RM680_RS00005;Name=RM680_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00005;old_locus_tag=RM680_00005
NZ_JAVRJI010000001.1	Protein Homology	CDS	199	513	.	-	0	ID=cds-WP_001830950.1;Parent=gene-RM680_RS00005;Dbxref=GenBank:WP_001830950.1;Name=WP_001830950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499854.1;locus_tag=RM680_RS00005;product=hypothetical protein;protein_id=WP_001830950.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	819	2267	.	-	.	ID=gene-RM680_RS00010;Name=RM680_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00010;old_locus_tag=RM680_00010
NZ_JAVRJI010000001.1	Protein Homology	CDS	819	2267	.	-	0	ID=cds-WP_001831092.1;Parent=gene-RM680_RS00010;Dbxref=GenBank:WP_001831092.1;Name=WP_001831092.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361629.1;locus_tag=RM680_RS00010;product=amino acid permease;protein_id=WP_001831092.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	2498	4012	.	+	.	ID=gene-RM680_RS00015;Name=RM680_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00015;old_locus_tag=RM680_00015
NZ_JAVRJI010000001.1	Protein Homology	CDS	2498	4012	.	+	0	ID=cds-WP_001831169.1;Parent=gene-RM680_RS00015;Dbxref=GenBank:WP_001831169.1;Name=WP_001831169.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831169.1;locus_tag=RM680_RS00015;product=catalase;protein_id=WP_001831169.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	4102	4251	.	+	.	ID=gene-RM680_RS00020;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM680_RS00020;old_locus_tag=RM680_00020
NZ_JAVRJI010000001.1	Protein Homology	CDS	4102	4251	.	+	0	ID=cds-WP_001831295.1;Parent=gene-RM680_RS00020;Dbxref=GenBank:WP_001831295.1;Name=WP_001831295.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=RM680_RS00020;product=50S ribosomal protein L33;protein_id=WP_001831295.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	4418	4687	.	+	.	ID=gene-RM680_RS00025;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=RM680_RS00025;old_locus_tag=RM680_00025
NZ_JAVRJI010000001.1	Protein Homology	CDS	4418	4687	.	+	0	ID=cds-WP_001831302.1;Parent=gene-RM680_RS00025;Dbxref=GenBank:WP_001831302.1;Name=WP_001831302.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384394.1;locus_tag=RM680_RS00025;product=30S ribosomal protein S14;protein_id=WP_001831302.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	4841	5818	.	+	.	ID=gene-RM680_RS00030;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=RM680_RS00030;old_locus_tag=RM680_00030
NZ_JAVRJI010000001.1	Protein Homology	CDS	4841	5818	.	+	0	ID=cds-WP_001832645.1;Parent=gene-RM680_RS00030;Dbxref=GenBank:WP_001832645.1;Name=WP_001832645.1;Ontology_term=GO:0006163,GO:0003920,GO:1902560;gbkey=CDS;gene=guaC;go_component=GMP reductase complex|1902560||IEA;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365036.1;locus_tag=RM680_RS00030;product=GMP reductase;protein_id=WP_001832645.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	5832	6857	.	+	.	ID=gene-RM680_RS00035;Name=RM680_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00035;old_locus_tag=RM680_00035
NZ_JAVRJI010000001.1	Protein Homology	CDS	5832	6857	.	+	0	ID=cds-WP_001831147.1;Parent=gene-RM680_RS00035;Dbxref=GenBank:WP_001831147.1;Name=WP_001831147.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439636.1;locus_tag=RM680_RS00035;product=CAP domain-containing protein;protein_id=WP_001831147.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	6912	7046	.	+	.	ID=gene-RM680_RS00040;Name=RM680_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00040;old_locus_tag=RM680_00040
NZ_JAVRJI010000001.1	GeneMarkS-2+	CDS	6912	7046	.	+	0	ID=cds-WP_002456209.1;Parent=gene-RM680_RS00040;Dbxref=GenBank:WP_002456209.1;Name=WP_002456209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS00040;product=hypothetical protein;protein_id=WP_002456209.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	7210	7830	.	-	.	ID=gene-RM680_RS00045;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=RM680_RS00045;old_locus_tag=RM680_00045
NZ_JAVRJI010000001.1	Protein Homology	CDS	7210	7830	.	-	0	ID=cds-WP_001831182.1;Parent=gene-RM680_RS00045;Dbxref=GenBank:WP_001831182.1;Name=WP_001831182.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499863.1;locus_tag=RM680_RS00045;product=transcriptional repressor LexA;protein_id=WP_001831182.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	7974	8207	.	+	.	ID=gene-RM680_RS00050;Name=sosA;gbkey=Gene;gene=sosA;gene_biotype=protein_coding;locus_tag=RM680_RS00050;old_locus_tag=RM680_00050
NZ_JAVRJI010000001.1	Protein Homology	CDS	7974	8207	.	+	0	ID=cds-WP_001831148.1;Parent=gene-RM680_RS00050;Dbxref=GenBank:WP_001831148.1;Name=WP_001831148.1;gbkey=CDS;gene=sosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473582.1;locus_tag=RM680_RS00050;product=DNA damage-induced cell division inhibitor SosA;protein_id=WP_001831148.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	8368	8604	.	+	.	ID=gene-RM680_RS00055;Name=RM680_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00055;old_locus_tag=RM680_00055
NZ_JAVRJI010000001.1	Protein Homology	CDS	8368	8604	.	+	0	ID=cds-WP_001831015.1;Parent=gene-RM680_RS00055;Dbxref=GenBank:WP_001831015.1;Name=WP_001831015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499968.1;locus_tag=RM680_RS00055;product=DUF896 domain-containing protein;protein_id=WP_001831015.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	8836	10824	.	+	.	ID=gene-RM680_RS00060;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=RM680_RS00060;old_locus_tag=RM680_00060
NZ_JAVRJI010000001.1	Protein Homology	CDS	8836	10824	.	+	0	ID=cds-WP_001831061.1;Parent=gene-RM680_RS00060;Dbxref=GenBank:WP_001831061.1;Name=WP_001831061.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001661967.1;locus_tag=RM680_RS00060;product=transketolase;protein_id=WP_001831061.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	11031	11258	.	+	.	ID=gene-RM680_RS00065;Name=RM680_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00065;old_locus_tag=RM680_00065
NZ_JAVRJI010000001.1	Protein Homology	CDS	11031	11258	.	+	0	ID=cds-WP_001831215.1;Parent=gene-RM680_RS00065;Dbxref=GenBank:WP_001831215.1;Name=WP_001831215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831215.1;locus_tag=RM680_RS00065;product=YneF family protein;protein_id=WP_001831215.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	11490	11957	.	+	.	ID=gene-RM680_RS00070;Name=RM680_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00070;old_locus_tag=RM680_00070
NZ_JAVRJI010000001.1	Protein Homology	CDS	11490	11957	.	+	0	ID=cds-WP_001831312.1;Parent=gene-RM680_RS00070;Dbxref=GenBank:WP_001831312.1;Name=WP_001831312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113790.1;locus_tag=RM680_RS00070;product=CcdC family protein;protein_id=WP_001831312.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	12065	13189	.	+	.	ID=gene-RM680_RS00075;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=RM680_RS00075;old_locus_tag=RM680_00075
NZ_JAVRJI010000001.1	Protein Homology	CDS	12065	13189	.	+	0	ID=cds-WP_001830960.1;Parent=gene-RM680_RS00075;Dbxref=GenBank:WP_001830960.1;Name=WP_001830960.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446363.1;locus_tag=RM680_RS00075;product=exonuclease subunit SbcD;protein_id=WP_001830960.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	13193	16222	.	+	.	ID=gene-RM680_RS00080;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=RM680_RS00080;old_locus_tag=RM680_00080
NZ_JAVRJI010000001.1	Protein Homology	CDS	13193	16222	.	+	0	ID=cds-WP_311563471.1;Parent=gene-RM680_RS00080;Dbxref=GenBank:WP_311563471.1;Name=WP_311563471.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503669.1;locus_tag=RM680_RS00080;product=exonuclease subunit SbcC;protein_id=WP_311563471.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	pseudogene	16340	16691	.	-	.	ID=gene-RM680_RS00085;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=pseudogene;locus_tag=RM680_RS00085;old_locus_tag=RM680_00085;pseudo=true
NZ_JAVRJI010000001.1	Protein Homology	CDS	16340	16691	.	-	0	ID=cds-RM680_RS00085;Parent=gene-RM680_RS00085;Note=frameshifted;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831237.1;locus_tag=RM680_RS00085;product=large conductance mechanosensitive channel protein MscL;pseudo=true;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	16903	18543	.	+	.	ID=gene-RM680_RS00090;Name=RM680_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00090;old_locus_tag=RM680_00090
NZ_JAVRJI010000001.1	Protein Homology	CDS	16903	18543	.	+	0	ID=cds-WP_001831122.1;Parent=gene-RM680_RS00090;Dbxref=GenBank:WP_001831122.1;Name=WP_001831122.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442731.1;locus_tag=RM680_RS00090;product=BCCT family transporter;protein_id=WP_001831122.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	18964	21669	.	+	.	ID=gene-RM680_RS00095;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=RM680_RS00095;old_locus_tag=RM680_00095
NZ_JAVRJI010000001.1	Protein Homology	CDS	18964	21669	.	+	0	ID=cds-WP_001830970.1;Parent=gene-RM680_RS00095;Dbxref=GenBank:WP_001830970.1;Name=WP_001830970.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499875.1;locus_tag=RM680_RS00095;product=aconitate hydratase AcnA;protein_id=WP_001830970.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	21792	22259	.	+	.	ID=gene-RM680_RS00100;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=RM680_RS00100;old_locus_tag=RM680_00100
NZ_JAVRJI010000001.1	Protein Homology	CDS	21792	22259	.	+	0	ID=cds-WP_001831194.1;Parent=gene-RM680_RS00100;Dbxref=GenBank:WP_001831194.1;Name=WP_001831194.1;Ontology_term=GO:0009234;gbkey=CDS;gene=menI;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499876.1;locus_tag=RM680_RS00100;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase MenI;protein_id=WP_001831194.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	22310	22606	.	-	.	ID=gene-RM680_RS00105;Name=RM680_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00105;old_locus_tag=RM680_00105
NZ_JAVRJI010000001.1	Protein Homology	CDS	22310	22606	.	-	0	ID=cds-WP_001831009.1;Parent=gene-RM680_RS00105;Dbxref=GenBank:WP_001831009.1;Name=WP_001831009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493656.1;locus_tag=RM680_RS00105;product=HesB/YadR/YfhF family protein;protein_id=WP_001831009.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	22850	23458	.	-	.	ID=gene-RM680_RS00110;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=RM680_RS00110;old_locus_tag=RM680_00110
NZ_JAVRJI010000001.1	Protein Homology	CDS	22850	23458	.	-	0	ID=cds-WP_001831258.1;Parent=gene-RM680_RS00110;Dbxref=GenBank:WP_001831258.1;Name=WP_001831258.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275846.1;locus_tag=RM680_RS00110;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_001831258.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	23668	25662	.	+	.	ID=gene-RM680_RS00115;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=RM680_RS00115;old_locus_tag=RM680_00115
NZ_JAVRJI010000001.1	Protein Homology	CDS	23668	25662	.	+	0	ID=cds-WP_002456533.1;Parent=gene-RM680_RS00115;Dbxref=GenBank:WP_002456533.1;Name=WP_002456533.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456533.1;locus_tag=RM680_RS00115;product=DNA topoisomerase IV subunit B;protein_id=WP_002456533.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	25659	28061	.	+	.	ID=gene-RM680_RS00120;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=RM680_RS00120;old_locus_tag=RM680_00120
NZ_JAVRJI010000001.1	Protein Homology	CDS	25659	28061	.	+	0	ID=cds-WP_311563474.1;Parent=gene-RM680_RS00120;Dbxref=GenBank:WP_311563474.1;Name=WP_311563474.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parC;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439655.1;locus_tag=RM680_RS00120;product=DNA topoisomerase IV subunit A;protein_id=WP_311563474.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	28273	29730	.	+	.	ID=gene-RM680_RS00125;Name=RM680_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00125;old_locus_tag=RM680_00125
NZ_JAVRJI010000001.1	Protein Homology	CDS	28273	29730	.	+	0	ID=cds-WP_001831046.1;Parent=gene-RM680_RS00125;Dbxref=GenBank:WP_001831046.1;Name=WP_001831046.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484777.1;locus_tag=RM680_RS00125;product=alanine/glycine:cation symporter family protein;protein_id=WP_001831046.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	29925	30773	.	+	.	ID=gene-RM680_RS00130;Name=glcT;gbkey=Gene;gene=glcT;gene_biotype=protein_coding;locus_tag=RM680_RS00130;old_locus_tag=RM680_00130
NZ_JAVRJI010000001.1	Protein Homology	CDS	29925	30773	.	+	0	ID=cds-WP_002456203.1;Parent=gene-RM680_RS00130;Dbxref=GenBank:WP_002456203.1;Name=WP_002456203.1;gbkey=CDS;gene=glcT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456203.1;locus_tag=RM680_RS00130;product=glucose PTS transporter transcription antiterminator GlcT;protein_id=WP_002456203.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	30919	32136	.	+	.	ID=gene-RM680_RS00135;Name=RM680_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00135;old_locus_tag=RM680_00135
NZ_JAVRJI010000001.1	Protein Homology	CDS	30919	32136	.	+	0	ID=cds-WP_002446374.1;Parent=gene-RM680_RS00135;Dbxref=GenBank:WP_002446374.1;Name=WP_002446374.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476707.1;locus_tag=RM680_RS00135;product=AI-2E family transporter;protein_id=WP_002446374.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	32390	34912	.	+	.	ID=gene-RM680_RS00140;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=RM680_RS00140;old_locus_tag=RM680_00140
NZ_JAVRJI010000001.1	Protein Homology	CDS	32390	34912	.	+	0	ID=cds-WP_002456532.1;Parent=gene-RM680_RS00140;Dbxref=GenBank:WP_002456532.1;Name=WP_002456532.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504545.1;locus_tag=RM680_RS00140;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_002456532.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	35106	35621	.	-	.	ID=gene-RM680_RS00145;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=RM680_RS00145;old_locus_tag=RM680_00145
NZ_JAVRJI010000001.1	Protein Homology	CDS	35106	35621	.	-	0	ID=cds-WP_002456531.1;Parent=gene-RM680_RS00145;Dbxref=GenBank:WP_002456531.1;Name=WP_002456531.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497837.1;locus_tag=RM680_RS00145;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_002456531.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	35757	36746	.	+	.	ID=gene-RM680_RS00150;Name=RM680_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00150;old_locus_tag=RM680_00150
NZ_JAVRJI010000001.1	Protein Homology	CDS	35757	36746	.	+	0	ID=cds-WP_001831067.1;Parent=gene-RM680_RS00150;Dbxref=GenBank:WP_001831067.1;Name=WP_001831067.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831067.1;locus_tag=RM680_RS00150;product=LCP family protein;protein_id=WP_001831067.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	pseudogene	37049	37236	.	-	.	ID=gene-RM680_RS00155;Name=RM680_RS00155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS00155;old_locus_tag=RM680_00155;pseudo=true
NZ_JAVRJI010000001.1	Protein Homology	CDS	37049	37236	.	-	0	ID=cds-RM680_RS00155;Parent=gene-RM680_RS00155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456764.1;locus_tag=RM680_RS00155;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	37291	37476	.	-	.	ID=gene-RM680_RS00160;Name=RM680_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00160;old_locus_tag=RM680_00160
NZ_JAVRJI010000001.1	Protein Homology	CDS	37291	37476	.	-	0	ID=cds-WP_001831035.1;Parent=gene-RM680_RS00160;Dbxref=GenBank:WP_001831035.1;Name=WP_001831035.1;Ontology_term=GO:0008152,GO:0016862;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499889.1;locus_tag=RM680_RS00160;product=2-hydroxymuconate tautomerase;protein_id=WP_001831035.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	37620	38882	.	+	.	ID=gene-RM680_RS00165;Name=RM680_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00165;old_locus_tag=RM680_00165
NZ_JAVRJI010000001.1	Protein Homology	CDS	37620	38882	.	+	0	ID=cds-WP_002468927.1;Parent=gene-RM680_RS00165;Dbxref=GenBank:WP_002468927.1;Name=WP_002468927.1;Ontology_term=GO:0006260,GO:0006281,GO:0003684,GO:0003887,GO:0046872;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499890.1;locus_tag=RM680_RS00165;product=Y-family DNA polymerase;protein_id=WP_002468927.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	38958	40046	.	-	.	ID=gene-RM680_RS00170;Name=RM680_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00170;old_locus_tag=RM680_00170
NZ_JAVRJI010000001.1	Protein Homology	CDS	38958	40046	.	-	0	ID=cds-WP_311563476.1;Parent=gene-RM680_RS00170;Dbxref=GenBank:WP_311563476.1;Name=WP_311563476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473587.1;locus_tag=RM680_RS00170;product=prephenate dehydrogenase;protein_id=WP_311563476.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	40705	42111	.	+	.	ID=gene-RM680_RS00175;Name=RM680_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00175;old_locus_tag=RM680_00175
NZ_JAVRJI010000001.1	Protein Homology	CDS	40705	42111	.	+	0	ID=cds-WP_001831072.1;Parent=gene-RM680_RS00175;Dbxref=GenBank:WP_001831072.1;Name=WP_001831072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503308.1;locus_tag=RM680_RS00175;product=anthranilate synthase component I;protein_id=WP_001831072.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	42108	42674	.	+	.	ID=gene-RM680_RS00180;Name=RM680_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00180;old_locus_tag=RM680_00180
NZ_JAVRJI010000001.1	Protein Homology	CDS	42108	42674	.	+	0	ID=cds-WP_001831157.1;Parent=gene-RM680_RS00180;Dbxref=GenBank:WP_001831157.1;Name=WP_001831157.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505749.1;locus_tag=RM680_RS00180;product=anthranilate synthase component II;protein_id=WP_001831157.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	42677	43672	.	+	.	ID=gene-RM680_RS00185;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=RM680_RS00185;old_locus_tag=RM680_00185
NZ_JAVRJI010000001.1	Protein Homology	CDS	42677	43672	.	+	0	ID=cds-WP_001830976.1;Parent=gene-RM680_RS00185;Dbxref=GenBank:WP_001830976.1;Name=WP_001830976.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495418.1;locus_tag=RM680_RS00185;product=anthranilate phosphoribosyltransferase;protein_id=WP_001830976.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	43676	44464	.	+	.	ID=gene-RM680_RS00190;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=RM680_RS00190;old_locus_tag=RM680_00190
NZ_JAVRJI010000001.1	Protein Homology	CDS	43676	44464	.	+	0	ID=cds-WP_001831115.1;Parent=gene-RM680_RS00190;Dbxref=GenBank:WP_001831115.1;Name=WP_001831115.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831115.1;locus_tag=RM680_RS00190;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_001831115.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	44454	45077	.	+	.	ID=gene-RM680_RS00195;Name=RM680_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00195;old_locus_tag=RM680_00195
NZ_JAVRJI010000001.1	Protein Homology	CDS	44454	45077	.	+	0	ID=cds-WP_001832767.1;Parent=gene-RM680_RS00195;Dbxref=GenBank:WP_001832767.1;Name=WP_001832767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476715.1;locus_tag=RM680_RS00195;product=phosphoribosylanthranilate isomerase;protein_id=WP_001832767.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	45081	46289	.	+	.	ID=gene-RM680_RS00200;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=RM680_RS00200;old_locus_tag=RM680_00200
NZ_JAVRJI010000001.1	Protein Homology	CDS	45081	46289	.	+	0	ID=cds-WP_001831324.1;Parent=gene-RM680_RS00200;Dbxref=GenBank:WP_001831324.1;Name=WP_001831324.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457484.1;locus_tag=RM680_RS00200;product=tryptophan synthase subunit beta;protein_id=WP_001831324.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	46282	47013	.	+	.	ID=gene-RM680_RS00205;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=RM680_RS00205;old_locus_tag=RM680_00205
NZ_JAVRJI010000001.1	Protein Homology	CDS	46282	47013	.	+	0	ID=cds-WP_002456200.1;Parent=gene-RM680_RS00205;Dbxref=GenBank:WP_002456200.1;Name=WP_002456200.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456200.1;locus_tag=RM680_RS00205;product=tryptophan synthase subunit alpha;protein_id=WP_002456200.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	47204	47863	.	+	.	ID=gene-RM680_RS00210;Name=RM680_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00210;old_locus_tag=RM680_00210
NZ_JAVRJI010000001.1	Protein Homology	CDS	47204	47863	.	+	0	ID=cds-WP_001830963.1;Parent=gene-RM680_RS00210;Dbxref=GenBank:WP_001830963.1;Name=WP_001830963.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830963.1;locus_tag=RM680_RS00210;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_001830963.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	48136	49389	.	+	.	ID=gene-RM680_RS00215;Name=RM680_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00215;old_locus_tag=RM680_00215
NZ_JAVRJI010000001.1	Protein Homology	CDS	48136	49389	.	+	0	ID=cds-WP_001830979.1;Parent=gene-RM680_RS00215;Dbxref=GenBank:WP_001830979.1;Name=WP_001830979.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495001.1;locus_tag=RM680_RS00215;product=aminoacyltransferase;protein_id=WP_001830979.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	49415	50668	.	+	.	ID=gene-RM680_RS00220;Name=RM680_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00220;old_locus_tag=RM680_00220
NZ_JAVRJI010000001.1	Protein Homology	CDS	49415	50668	.	+	0	ID=cds-WP_002439665.1;Parent=gene-RM680_RS00220;Dbxref=GenBank:WP_002439665.1;Name=WP_002439665.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=RM680_RS00220;product=aminoacyltransferase;protein_id=WP_002439665.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	51688	52452	.	+	.	ID=gene-RM680_RS00225;Name=RM680_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00225;old_locus_tag=RM680_00225
NZ_JAVRJI010000001.1	Protein Homology	CDS	51688	52452	.	+	0	ID=cds-WP_002476720.1;Parent=gene-RM680_RS00225;Dbxref=GenBank:WP_002476720.1;Name=WP_002476720.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361149.1;locus_tag=RM680_RS00225;product=HAD-IIB family hydrolase;protein_id=WP_002476720.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	52517	53527	.	+	.	ID=gene-RM680_RS00230;Name=RM680_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00230;old_locus_tag=RM680_00230
NZ_JAVRJI010000001.1	Protein Homology	CDS	52517	53527	.	+	0	ID=cds-WP_002485774.1;Parent=gene-RM680_RS00230;Dbxref=GenBank:WP_002485774.1;Name=WP_002485774.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502412.1;locus_tag=RM680_RS00230;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_002485774.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	53657	54352	.	-	.	ID=gene-RM680_RS00235;Name=RM680_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00235;old_locus_tag=RM680_00235
NZ_JAVRJI010000001.1	Protein Homology	CDS	53657	54352	.	-	0	ID=cds-WP_032606506.1;Parent=gene-RM680_RS00235;Dbxref=GenBank:WP_032606506.1;Name=WP_032606506.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484827.1;locus_tag=RM680_RS00235;product=ABC transporter ATP-binding protein;protein_id=WP_032606506.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	54355	55131	.	-	.	ID=gene-RM680_RS00240;Name=RM680_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00240;old_locus_tag=RM680_00240
NZ_JAVRJI010000001.1	Protein Homology	CDS	54355	55131	.	-	0	ID=cds-WP_002485778.1;Parent=gene-RM680_RS00240;Dbxref=GenBank:WP_002485778.1;Name=WP_002485778.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485778.1;locus_tag=RM680_RS00240;product=ATP-binding cassette domain-containing protein;protein_id=WP_002485778.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	55094	55948	.	-	.	ID=gene-RM680_RS00245;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=RM680_RS00245;old_locus_tag=RM680_00245
NZ_JAVRJI010000001.1	Protein Homology	CDS	55094	55948	.	-	0	ID=cds-WP_002476723.1;Parent=gene-RM680_RS00245;Dbxref=GenBank:WP_002476723.1;Name=WP_002476723.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493642.1;locus_tag=RM680_RS00245;product=nickel transporter permease;protein_id=WP_002476723.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	55938	56939	.	-	.	ID=gene-RM680_RS00250;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=RM680_RS00250;old_locus_tag=RM680_00250
NZ_JAVRJI010000001.1	Protein Homology	CDS	55938	56939	.	-	0	ID=cds-WP_002485775.1;Parent=gene-RM680_RS00250;Dbxref=GenBank:WP_002485775.1;Name=WP_002485775.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502410.1;locus_tag=RM680_RS00250;product=nickel ABC transporter permease;protein_id=WP_002485775.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	57107	57445	.	-	.	ID=gene-RM680_RS00255;Name=RM680_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00255;old_locus_tag=RM680_00255
NZ_JAVRJI010000001.1	Protein Homology	CDS	57107	57445	.	-	0	ID=cds-WP_002484811.1;Parent=gene-RM680_RS00255;Dbxref=GenBank:WP_002484811.1;Name=WP_002484811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476725.1;locus_tag=RM680_RS00255;product=hypothetical protein;protein_id=WP_002484811.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	57693	59504	.	+	.	ID=gene-RM680_RS00260;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=RM680_RS00260;old_locus_tag=RM680_00260
NZ_JAVRJI010000001.1	Protein Homology	CDS	57693	59504	.	+	0	ID=cds-WP_002484829.1;Parent=gene-RM680_RS00260;Dbxref=GenBank:WP_002484829.1;Name=WP_002484829.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505490.1;locus_tag=RM680_RS00260;product=oligoendopeptidase F;protein_id=WP_002484829.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	59598	60245	.	-	.	ID=gene-RM680_RS00265;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=RM680_RS00265;old_locus_tag=RM680_00265
NZ_JAVRJI010000001.1	Protein Homology	CDS	59598	60245	.	-	0	ID=cds-WP_001830968.1;Parent=gene-RM680_RS00265;Dbxref=GenBank:WP_001830968.1;Name=WP_001830968.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830968.1;locus_tag=RM680_RS00265;product=phosphate signaling complex protein PhoU;protein_id=WP_001830968.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	60252	61127	.	-	.	ID=gene-RM680_RS00270;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=RM680_RS00270;old_locus_tag=RM680_00270
NZ_JAVRJI010000001.1	Protein Homology	CDS	60252	61127	.	-	0	ID=cds-WP_001831097.1;Parent=gene-RM680_RS00270;Dbxref=GenBank:WP_001831097.1;Name=WP_001831097.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831097.1;locus_tag=RM680_RS00270;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_001831097.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	61220	62125	.	-	.	ID=gene-RM680_RS00275;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=RM680_RS00275;old_locus_tag=RM680_00275
NZ_JAVRJI010000001.1	Protein Homology	CDS	61220	62125	.	-	0	ID=cds-WP_001831209.1;Parent=gene-RM680_RS00275;Dbxref=GenBank:WP_001831209.1;Name=WP_001831209.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831209.1;locus_tag=RM680_RS00275;product=phosphate ABC transporter permease PstA;protein_id=WP_001831209.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	62127	63053	.	-	.	ID=gene-RM680_RS00280;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=RM680_RS00280;old_locus_tag=RM680_00280
NZ_JAVRJI010000001.1	Protein Homology	CDS	62127	63053	.	-	0	ID=cds-WP_001830936.1;Parent=gene-RM680_RS00280;Dbxref=GenBank:WP_001830936.1;Name=WP_001830936.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453209.1;locus_tag=RM680_RS00280;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_001830936.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	63260	64237	.	-	.	ID=gene-RM680_RS00285;Name=RM680_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00285;old_locus_tag=RM680_00285
NZ_JAVRJI010000001.1	Protein Homology	CDS	63260	64237	.	-	0	ID=cds-WP_002467942.1;Parent=gene-RM680_RS00285;Dbxref=GenBank:WP_002467942.1;Name=WP_002467942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505198.1;locus_tag=RM680_RS00285;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WP_002467942.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	64841	65737	.	-	.	ID=gene-RM680_RS00290;Name=cvfB;gbkey=Gene;gene=cvfB;gene_biotype=protein_coding;locus_tag=RM680_RS00290;old_locus_tag=RM680_00290
NZ_JAVRJI010000001.1	Protein Homology	CDS	64841	65737	.	-	0	ID=cds-WP_311563485.1;Parent=gene-RM680_RS00290;Dbxref=GenBank:WP_311563485.1;Name=WP_311563485.1;gbkey=CDS;gene=cvfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470638.1;locus_tag=RM680_RS00290;product=RNA-binding virulence regulatory protein CvfB;protein_id=WP_311563485.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	65952	67559	.	+	.	ID=gene-RM680_RS00295;Name=RM680_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00295;old_locus_tag=RM680_00295
NZ_JAVRJI010000001.1	Protein Homology	CDS	65952	67559	.	+	0	ID=cds-WP_001830940.1;Parent=gene-RM680_RS00295;Dbxref=GenBank:WP_001830940.1;Name=WP_001830940.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493635.1;locus_tag=RM680_RS00295;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_001830940.1;transl_table=11
NZ_JAVRJI010000001.1	cmsearch	riboswitch	67903	68082	.	+	.	ID=id-NZ_JAVRJI010000001.1:67903..68082;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000001.1	RefSeq	gene	68136	69368	.	+	.	ID=gene-RM680_RS00300;Name=RM680_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00300;old_locus_tag=RM680_00300
NZ_JAVRJI010000001.1	Protein Homology	CDS	68136	69368	.	+	0	ID=cds-WP_024051125.1;Parent=gene-RM680_RS00300;Dbxref=GenBank:WP_024051125.1;Name=WP_024051125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303136.1;locus_tag=RM680_RS00300;product=aspartate kinase;protein_id=WP_024051125.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	69439	70428	.	+	.	ID=gene-RM680_RS00305;Name=RM680_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00305;old_locus_tag=RM680_00305
NZ_JAVRJI010000001.1	Protein Homology	CDS	69439	70428	.	+	0	ID=cds-WP_311563488.1;Parent=gene-RM680_RS00305;Dbxref=GenBank:WP_311563488.1;Name=WP_311563488.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831123.1;locus_tag=RM680_RS00305;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_311563488.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	70430	71314	.	+	.	ID=gene-RM680_RS00310;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=RM680_RS00310;old_locus_tag=RM680_00310
NZ_JAVRJI010000001.1	Protein Homology	CDS	70430	71314	.	+	0	ID=cds-WP_002495424.1;Parent=gene-RM680_RS00310;Dbxref=GenBank:WP_002495424.1;Name=WP_002495424.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503318.1;locus_tag=RM680_RS00310;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002495424.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	71314	72036	.	+	.	ID=gene-RM680_RS00315;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=RM680_RS00315;old_locus_tag=RM680_00315
NZ_JAVRJI010000001.1	Protein Homology	CDS	71314	72036	.	+	0	ID=cds-WP_001830951.1;Parent=gene-RM680_RS00315;Dbxref=GenBank:WP_001830951.1;Name=WP_001830951.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830951.1;locus_tag=RM680_RS00315;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_001830951.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	72058	72780	.	+	.	ID=gene-RM680_RS00320;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=RM680_RS00320;old_locus_tag=RM680_00320
NZ_JAVRJI010000001.1	Protein Homology	CDS	72058	72780	.	+	0	ID=cds-WP_001830955.1;Parent=gene-RM680_RS00320;Dbxref=GenBank:WP_001830955.1;Name=WP_001830955.1;Ontology_term=GO:0009089,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830955.1;locus_tag=RM680_RS00320;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;protein_id=WP_001830955.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	72938	74089	.	+	.	ID=gene-RM680_RS00325;Name=RM680_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00325;old_locus_tag=RM680_00325
NZ_JAVRJI010000001.1	Protein Homology	CDS	72938	74089	.	+	0	ID=cds-WP_001832789.1;Parent=gene-RM680_RS00325;Dbxref=GenBank:WP_001832789.1;Name=WP_001832789.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499926.1;locus_tag=RM680_RS00325;product=amidohydrolase;protein_id=WP_001832789.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	74095	75168	.	+	.	ID=gene-RM680_RS00330;Name=RM680_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00330;old_locus_tag=RM680_00330
NZ_JAVRJI010000001.1	Protein Homology	CDS	74095	75168	.	+	0	ID=cds-WP_001831203.1;Parent=gene-RM680_RS00330;Dbxref=GenBank:WP_001831203.1;Name=WP_001831203.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784,GO:0030170;gbkey=CDS;go_function=alanine racemase activity|0008784||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476735.1;locus_tag=RM680_RS00330;product=alanine racemase;protein_id=WP_001831203.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	75169	76434	.	+	.	ID=gene-RM680_RS00335;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=RM680_RS00335;old_locus_tag=RM680_00335
NZ_JAVRJI010000001.1	Protein Homology	CDS	75169	76434	.	+	0	ID=cds-WP_070501352.1;Parent=gene-RM680_RS00335;Dbxref=GenBank:WP_070501352.1;Name=WP_070501352.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499928.1;locus_tag=RM680_RS00335;product=diaminopimelate decarboxylase;protein_id=WP_070501352.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	76566	77315	.	-	.	ID=gene-RM680_RS00340;Name=RM680_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00340;old_locus_tag=RM680_00340
NZ_JAVRJI010000001.1	Protein Homology	CDS	76566	77315	.	-	0	ID=cds-WP_002495029.1;Parent=gene-RM680_RS00340;Dbxref=GenBank:WP_002495029.1;Name=WP_002495029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831136.1;locus_tag=RM680_RS00340;product=ABC transporter permease;protein_id=WP_002495029.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	77324	78187	.	-	.	ID=gene-RM680_RS00345;Name=RM680_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00345;old_locus_tag=RM680_00345
NZ_JAVRJI010000001.1	Protein Homology	CDS	77324	78187	.	-	0	ID=cds-WP_002495030.1;Parent=gene-RM680_RS00345;Dbxref=GenBank:WP_002495030.1;Name=WP_002495030.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495030.1;locus_tag=RM680_RS00345;product=ABC transporter ATP-binding protein;protein_id=WP_002495030.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	78174	78584	.	-	.	ID=gene-RM680_RS00350;Name=RM680_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00350;old_locus_tag=RM680_00350
NZ_JAVRJI010000001.1	Protein Homology	CDS	78174	78584	.	-	0	ID=cds-WP_001830954.1;Parent=gene-RM680_RS00350;Dbxref=GenBank:WP_001830954.1;Name=WP_001830954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500961.1;locus_tag=RM680_RS00350;product=Msa family membrane protein;protein_id=WP_001830954.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	pseudogene	78590	79171	.	-	.	ID=gene-RM680_RS00355;Name=RM680_RS00355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS00355;old_locus_tag=RM680_00355;pseudo=true
NZ_JAVRJI010000001.1	Protein Homology	CDS	78590	79171	.	-	0	ID=cds-RM680_RS00355;Parent=gene-RM680_RS00355;Note=internal stop;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476739.1;locus_tag=RM680_RS00355;product=CPBP family intramembrane glutamic endopeptidase;pseudo=true;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	79530	79730	.	-	.	ID=gene-RM680_RS00360;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;gene_synonym=msaB;locus_tag=RM680_RS00360;old_locus_tag=RM680_00360
NZ_JAVRJI010000001.1	Protein Homology	CDS	79530	79730	.	-	0	ID=cds-WP_001831260.1;Parent=gene-RM680_RS00360;Dbxref=GenBank:WP_001831260.1;Name=WP_001831260.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1;locus_tag=RM680_RS00360;product=cold shock protein CspA;protein_id=WP_001831260.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	79911	80219	.	-	.	ID=gene-RM680_RS00365;Name=msaA;gbkey=Gene;gene=msaA;gene_biotype=protein_coding;locus_tag=RM680_RS00365;old_locus_tag=RM680_00365
NZ_JAVRJI010000001.1	Protein Homology	CDS	79911	80219	.	-	0	ID=cds-WP_002439708.1;Parent=gene-RM680_RS00365;Dbxref=GenBank:WP_002439708.1;Name=WP_002439708.1;gbkey=CDS;gene=msaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439708.1;locus_tag=RM680_RS00365;product=regulatory protein MsaA;protein_id=WP_002439708.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	80378	80647	.	+	.	ID=gene-RM680_RS00370;Name=RM680_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00370;old_locus_tag=RM680_00370
NZ_JAVRJI010000001.1	Protein Homology	CDS	80378	80647	.	+	0	ID=cds-WP_001831190.1;Parent=gene-RM680_RS00370;Dbxref=GenBank:WP_001831190.1;Name=WP_001831190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831190.1;locus_tag=RM680_RS00370;product=acylphosphatase;protein_id=WP_001831190.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	80687	81313	.	+	.	ID=gene-RM680_RS00375;Name=RM680_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00375;old_locus_tag=RM680_00375
NZ_JAVRJI010000001.1	Protein Homology	CDS	80687	81313	.	+	0	ID=cds-WP_002476740.1;Parent=gene-RM680_RS00375;Dbxref=GenBank:WP_002476740.1;Name=WP_002476740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360285.1;locus_tag=RM680_RS00375;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=WP_002476740.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	81336	82466	.	+	.	ID=gene-RM680_RS00380;Name=RM680_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00380;old_locus_tag=RM680_00380
NZ_JAVRJI010000001.1	Protein Homology	CDS	81336	82466	.	+	0	ID=cds-WP_001831251.1;Parent=gene-RM680_RS00380;Dbxref=GenBank:WP_001831251.1;Name=WP_001831251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831251.1;locus_tag=RM680_RS00380;product=toxic anion resistance protein;protein_id=WP_001831251.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	82542	83885	.	-	.	ID=gene-RM680_RS00385;Name=brnQ3;gbkey=Gene;gene=brnQ3;gene_biotype=protein_coding;locus_tag=RM680_RS00385;old_locus_tag=RM680_00385
NZ_JAVRJI010000001.1	Protein Homology	CDS	82542	83885	.	-	0	ID=cds-WP_001830938.1;Parent=gene-RM680_RS00385;Dbxref=GenBank:WP_001830938.1;Name=WP_001830938.1;gbkey=CDS;gene=brnQ3;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303123.1;locus_tag=RM680_RS00385;product=branched-chain amino acid-like transporter carrier protein BrnQ3;protein_id=WP_001830938.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	84072	85961	.	-	.	ID=gene-RM680_RS00390;Name=RM680_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00390;old_locus_tag=RM680_00390
NZ_JAVRJI010000001.1	Protein Homology	CDS	84072	85961	.	-	0	ID=cds-WP_002484818.1;Parent=gene-RM680_RS00390;Dbxref=GenBank:WP_002484818.1;Name=WP_002484818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499939.1;locus_tag=RM680_RS00390;product=vWA domain-containing protein;protein_id=WP_002484818.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	85974	86765	.	-	.	ID=gene-RM680_RS00395;Name=RM680_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00395;old_locus_tag=RM680_00395
NZ_JAVRJI010000001.1	Protein Homology	CDS	85974	86765	.	-	0	ID=cds-WP_001831311.1;Parent=gene-RM680_RS00395;Dbxref=GenBank:WP_001831311.1;Name=WP_001831311.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831311.1;locus_tag=RM680_RS00395;product=ATP-binding protein;protein_id=WP_001831311.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	86937	87140	.	-	.	ID=gene-RM680_RS00400;Name=RM680_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00400;old_locus_tag=RM680_00400
NZ_JAVRJI010000001.1	Protein Homology	CDS	86937	87140	.	-	0	ID=cds-WP_001831030.1;Parent=gene-RM680_RS00400;Dbxref=GenBank:WP_001831030.1;Name=WP_001831030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499941.2;locus_tag=RM680_RS00400;product=DUF6501 family protein;protein_id=WP_001831030.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	87165	87974	.	-	.	ID=gene-RM680_RS00405;Name=RM680_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00405;old_locus_tag=RM680_00405
NZ_JAVRJI010000001.1	Protein Homology	CDS	87165	87974	.	-	0	ID=cds-WP_311563489.1;Parent=gene-RM680_RS00405;Dbxref=GenBank:WP_311563489.1;Name=WP_311563489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831172.1;locus_tag=RM680_RS00405;product=VOC family protein;protein_id=WP_311563489.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	88175	88348	.	+	.	ID=gene-RM680_RS00410;Name=RM680_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00410;old_locus_tag=RM680_00410
NZ_JAVRJI010000001.1	Protein Homology	CDS	88175	88348	.	+	0	ID=cds-WP_001831077.1;Parent=gene-RM680_RS00410;Dbxref=GenBank:WP_001831077.1;Name=WP_001831077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831077.1;locus_tag=RM680_RS00410;product=hypothetical protein;protein_id=WP_001831077.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	88505	89767	.	-	.	ID=gene-RM680_RS00415;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=RM680_RS00415;old_locus_tag=RM680_00415
NZ_JAVRJI010000001.1	Protein Homology	CDS	88505	89767	.	-	0	ID=cds-WP_001832759.1;Parent=gene-RM680_RS00415;Dbxref=GenBank:WP_001832759.1;Name=WP_001832759.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476746.1;locus_tag=RM680_RS00415;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_001832759.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	89786	92590	.	-	.	ID=gene-RM680_RS00420;Name=RM680_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00420;old_locus_tag=RM680_00420
NZ_JAVRJI010000001.1	Protein Homology	CDS	89786	92590	.	-	0	ID=cds-WP_002456517.1;Parent=gene-RM680_RS00420;Dbxref=GenBank:WP_002456517.1;Name=WP_002456517.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493623.1;locus_tag=RM680_RS00420;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_002456517.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	93005	94375	.	-	.	ID=gene-RM680_RS00425;Name=RM680_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00425;old_locus_tag=RM680_00425
NZ_JAVRJI010000001.1	Protein Homology	CDS	93005	94375	.	-	0	ID=cds-WP_001831043.1;Parent=gene-RM680_RS00425;Dbxref=GenBank:WP_001831043.1;Name=WP_001831043.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489435.1;locus_tag=RM680_RS00425;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_001831043.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	94372	95031	.	-	.	ID=gene-RM680_RS00430;Name=RM680_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00430;old_locus_tag=RM680_00430
NZ_JAVRJI010000001.1	Protein Homology	CDS	94372	95031	.	-	0	ID=cds-WP_001830971.1;Parent=gene-RM680_RS00430;Dbxref=GenBank:WP_001830971.1;Name=WP_001830971.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499946.1;locus_tag=RM680_RS00430;product=response regulator transcription factor;protein_id=WP_001830971.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	95590	96357	.	-	.	ID=gene-RM680_RS00440;Name=RM680_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00440;old_locus_tag=RM680_00440
NZ_JAVRJI010000001.1	Protein Homology	CDS	95590	96357	.	-	0	ID=cds-WP_001831263.1;Parent=gene-RM680_RS00440;Dbxref=GenBank:WP_001831263.1;Name=WP_001831263.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433585.1;locus_tag=RM680_RS00440;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001831263.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	96364	97689	.	-	.	ID=gene-RM680_RS00445;Name=RM680_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00445;old_locus_tag=RM680_00445
NZ_JAVRJI010000001.1	Protein Homology	CDS	96364	97689	.	-	0	ID=cds-WP_002484816.1;Parent=gene-RM680_RS00445;Dbxref=GenBank:WP_002484816.1;Name=WP_002484816.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832781.1;locus_tag=RM680_RS00445;product=MATE family efflux transporter;protein_id=WP_002484816.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	97676	98530	.	-	.	ID=gene-RM680_RS00450;Name=RM680_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00450;old_locus_tag=RM680_00450
NZ_JAVRJI010000001.1	Protein Homology	CDS	97676	98530	.	-	0	ID=cds-WP_311563490.1;Parent=gene-RM680_RS00450;Dbxref=GenBank:WP_311563490.1;Name=WP_311563490.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831294.1;locus_tag=RM680_RS00450;product=metallophosphoesterase family protein;protein_id=WP_311563490.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	98544	99440	.	-	.	ID=gene-RM680_RS00455;Name=RM680_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00455;old_locus_tag=RM680_00455
NZ_JAVRJI010000001.1	Protein Homology	CDS	98544	99440	.	-	0	ID=cds-WP_001830948.1;Parent=gene-RM680_RS00455;Dbxref=GenBank:WP_001830948.1;Name=WP_001830948.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476753.1;locus_tag=RM680_RS00455;product=carbohydrate ABC transporter permease;protein_id=WP_001830948.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	99456	101144	.	-	.	ID=gene-RM680_RS00460;Name=RM680_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00460;old_locus_tag=RM680_00460
NZ_JAVRJI010000001.1	Protein Homology	CDS	99456	101144	.	-	0	ID=cds-WP_001831225.1;Parent=gene-RM680_RS00460;Dbxref=GenBank:WP_001831225.1;Name=WP_001831225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476123.1;locus_tag=RM680_RS00460;product=extracellular solute-binding protein;protein_id=WP_001831225.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	101156	102112	.	-	.	ID=gene-RM680_RS00465;Name=RM680_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00465;old_locus_tag=RM680_00465
NZ_JAVRJI010000001.1	Protein Homology	CDS	101156	102112	.	-	0	ID=cds-WP_002470606.1;Parent=gene-RM680_RS00465;Dbxref=GenBank:WP_002470606.1;Name=WP_002470606.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476107.1;locus_tag=RM680_RS00465;product=ABC transporter permease;protein_id=WP_002470606.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	102109	103200	.	-	.	ID=gene-RM680_RS00470;Name=RM680_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00470;old_locus_tag=RM680_00470
NZ_JAVRJI010000001.1	Protein Homology	CDS	102109	103200	.	-	0	ID=cds-WP_002456515.1;Parent=gene-RM680_RS00470;Dbxref=GenBank:WP_002456515.1;Name=WP_002456515.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457660.1;locus_tag=RM680_RS00470;product=ABC transporter ATP-binding protein;protein_id=WP_002456515.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	103551	104165	.	-	.	ID=gene-RM680_RS00475;Name=RM680_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00475;old_locus_tag=RM680_00475
NZ_JAVRJI010000001.1	Protein Homology	CDS	103551	104165	.	-	0	ID=cds-WP_001831017.1;Parent=gene-RM680_RS00475;Dbxref=GenBank:WP_001831017.1;Name=WP_001831017.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457661.1;locus_tag=RM680_RS00475;product=phosphatase PAP2 family protein;protein_id=WP_001831017.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	104178	105251	.	-	.	ID=gene-RM680_RS00480;Name=RM680_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00480;old_locus_tag=RM680_00480
NZ_JAVRJI010000001.1	Protein Homology	CDS	104178	105251	.	-	0	ID=cds-WP_002467698.1;Parent=gene-RM680_RS00480;Dbxref=GenBank:WP_002467698.1;Name=WP_002467698.1;Ontology_term=GO:0050511;gbkey=CDS;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446436.1;locus_tag=RM680_RS00480;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_002467698.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	105269	105772	.	-	.	ID=gene-RM680_RS00485;Name=RM680_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00485;old_locus_tag=RM680_00485
NZ_JAVRJI010000001.1	Protein Homology	CDS	105269	105772	.	-	0	ID=cds-WP_002494459.1;Parent=gene-RM680_RS00485;Dbxref=GenBank:WP_002494459.1;Name=WP_002494459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494459.1;locus_tag=RM680_RS00485;product=GNAT family N-acetyltransferase;protein_id=WP_002494459.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	106108	107583	.	-	.	ID=gene-RM680_RS00490;Name=RM680_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00490;old_locus_tag=RM680_00490
NZ_JAVRJI010000001.1	Protein Homology	CDS	106108	107583	.	-	0	ID=cds-WP_001831212.1;Parent=gene-RM680_RS00490;Dbxref=GenBank:WP_001831212.1;Name=WP_001831212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476758.1;locus_tag=RM680_RS00490;product=S41 family peptidase;protein_id=WP_001831212.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	107928	108152	.	-	.	ID=gene-RM680_RS00495;Name=RM680_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00495;old_locus_tag=RM680_00495
NZ_JAVRJI010000001.1	Protein Homology	CDS	107928	108152	.	-	0	ID=cds-WP_002494460.1;Parent=gene-RM680_RS00495;Dbxref=GenBank:WP_002494460.1;Name=WP_002494460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499954.1;locus_tag=RM680_RS00495;product=YozE family protein;protein_id=WP_002494460.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	108152	108652	.	-	.	ID=gene-RM680_RS00500;Name=RM680_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00500;old_locus_tag=RM680_00500
NZ_JAVRJI010000001.1	Protein Homology	CDS	108152	108652	.	-	0	ID=cds-WP_001831133.1;Parent=gene-RM680_RS00500;Dbxref=GenBank:WP_001831133.1;Name=WP_001831133.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499955.1;locus_tag=RM680_RS00500;product=PTS sugar transporter subunit IIA;protein_id=WP_001831133.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	108665	109093	.	-	.	ID=gene-RM680_RS00505;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=RM680_RS00505;old_locus_tag=RM680_00505
NZ_JAVRJI010000001.1	Protein Homology	CDS	108665	109093	.	-	0	ID=cds-WP_002439748.1;Parent=gene-RM680_RS00505;Dbxref=GenBank:WP_002439748.1;Name=WP_002439748.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499956.1;locus_tag=RM680_RS00505;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_002439748.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	109086	109613	.	-	.	ID=gene-RM680_RS00510;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=RM680_RS00510;old_locus_tag=RM680_00510
NZ_JAVRJI010000001.1	Protein Homology	CDS	109086	109613	.	-	0	ID=cds-WP_002489428.1;Parent=gene-RM680_RS00510;Dbxref=GenBank:WP_002489428.1;Name=WP_002489428.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453252.1;locus_tag=RM680_RS00510;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_002489428.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	109716	110564	.	-	.	ID=gene-RM680_RS00515;Name=fakB2;gbkey=Gene;gene=fakB2;gene_biotype=protein_coding;locus_tag=RM680_RS00515;old_locus_tag=RM680_00515
NZ_JAVRJI010000001.1	Protein Homology	CDS	109716	110564	.	-	0	ID=cds-WP_002470634.1;Parent=gene-RM680_RS00515;Dbxref=GenBank:WP_002470634.1;Name=WP_002470634.1;gbkey=CDS;gene=fakB2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457666.1;locus_tag=RM680_RS00515;product=fatty acid kinase binding subunit FakB2;protein_id=WP_002470634.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	110574	111059	.	-	.	ID=gene-RM680_RS00520;Name=dfrC;gbkey=Gene;gene=dfrC;gene_biotype=protein_coding;locus_tag=RM680_RS00520;old_locus_tag=RM680_00520
NZ_JAVRJI010000001.1	Protein Homology	CDS	110574	111059	.	-	0	ID=cds-WP_001830952.1;Parent=gene-RM680_RS00520;Dbxref=GenBank:WP_001830952.1;Name=WP_001830952.1;Ontology_term=GO:0004146;gbkey=CDS;gene=dfrC;go_function=dihydrofolate reductase activity|0004146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830952.1;locus_tag=RM680_RS00520;product=trimethoprim-sensitive dihydrofolate reductase DfrC;protein_id=WP_001830952.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	111101	112057	.	-	.	ID=gene-RM680_RS00525;Name=RM680_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00525;old_locus_tag=RM680_00525
NZ_JAVRJI010000001.1	Protein Homology	CDS	111101	112057	.	-	0	ID=cds-WP_311563491.1;Parent=gene-RM680_RS00525;Dbxref=GenBank:WP_311563491.1;Name=WP_311563491.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499960.1;locus_tag=RM680_RS00525;product=thymidylate synthase;protein_id=WP_311563491.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	112371	113033	.	-	.	ID=gene-RM680_RS00530;Name=RM680_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00530;old_locus_tag=RM680_00530
NZ_JAVRJI010000001.1	Protein Homology	CDS	112371	113033	.	-	0	ID=cds-WP_002439753.1;Parent=gene-RM680_RS00530;Dbxref=GenBank:WP_002439753.1;Name=WP_002439753.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497879.1;locus_tag=RM680_RS00530;product=ABC transporter ATP-binding protein;protein_id=WP_002439753.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	113049	114098	.	-	.	ID=gene-RM680_RS00535;Name=RM680_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00535;old_locus_tag=RM680_00535
NZ_JAVRJI010000001.1	Protein Homology	CDS	113049	114098	.	-	0	ID=cds-WP_002439754.1;Parent=gene-RM680_RS00535;Dbxref=GenBank:WP_002439754.1;Name=WP_002439754.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476762.1;locus_tag=RM680_RS00535;product=ABC transporter permease;protein_id=WP_002439754.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	114310	114747	.	-	.	ID=gene-RM680_RS00540;Name=brxA;gbkey=Gene;gene=brxA;gene_biotype=protein_coding;locus_tag=RM680_RS00540;old_locus_tag=RM680_00540
NZ_JAVRJI010000001.1	Protein Homology	CDS	114310	114747	.	-	0	ID=cds-WP_002457670.1;Parent=gene-RM680_RS00540;Dbxref=GenBank:WP_002457670.1;Name=WP_002457670.1;gbkey=CDS;gene=brxA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499961.1;locus_tag=RM680_RS00540;product=bacilliredoxin BrxA;protein_id=WP_002457670.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	114799	115059	.	-	.	ID=gene-RM680_RS00545;Name=RM680_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00545;old_locus_tag=RM680_00545
NZ_JAVRJI010000001.1	Protein Homology	CDS	114799	115059	.	-	0	ID=cds-WP_001831110.1;Parent=gene-RM680_RS00545;Dbxref=GenBank:WP_001831110.1;Name=WP_001831110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831110.1;locus_tag=RM680_RS00545;product=NifU N-terminal domain-containing protein;protein_id=WP_001831110.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	115071	115265	.	-	.	ID=gene-RM680_RS00550;Name=RM680_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00550;old_locus_tag=RM680_00550
NZ_JAVRJI010000001.1	Protein Homology	CDS	115071	115265	.	-	0	ID=cds-WP_002439757.1;Parent=gene-RM680_RS00550;Dbxref=GenBank:WP_002439757.1;Name=WP_002439757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439757.1;locus_tag=RM680_RS00550;product=zinc-finger domain-containing protein;protein_id=WP_002439757.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	115516	116220	.	+	.	ID=gene-RM680_RS00555;Name=RM680_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00555;old_locus_tag=RM680_00555
NZ_JAVRJI010000001.1	Protein Homology	CDS	115516	116220	.	+	0	ID=cds-WP_001831106.1;Parent=gene-RM680_RS00555;Dbxref=GenBank:WP_001831106.1;Name=WP_001831106.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499965.1;locus_tag=RM680_RS00555;product=queuosine precursor transporter;protein_id=WP_001831106.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	116545	116937	.	+	.	ID=gene-RM680_RS00560;Name=RM680_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00560;old_locus_tag=RM680_00560
NZ_JAVRJI010000001.1	Protein Homology	CDS	116545	116937	.	+	0	ID=cds-WP_002439759.1;Parent=gene-RM680_RS00560;Dbxref=GenBank:WP_002439759.1;Name=WP_002439759.1;Ontology_term=GO:0043137,GO:0000287,GO:0003676,GO:0004523;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=DNA replication%2C removal of RNA primer|0043137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439759.1;locus_tag=RM680_RS00560;product=ribonuclease HI family protein;protein_id=WP_002439759.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	pseudogene	117112	147558	.	-	.	ID=gene-RM680_RS00565;Name=ebh;gbkey=Gene;gene=ebh;gene_biotype=pseudogene;locus_tag=RM680_RS00565;old_locus_tag=RM680_00565;pseudo=true
NZ_JAVRJI010000001.1	Protein Homology	CDS	117112	147558	.	-	0	ID=cds-RM680_RS00565;Parent=gene-RM680_RS00565;Note=internal stop;Ontology_term=GO:0006972;gbkey=CDS;gene=ebh;go_process=hyperosmotic response|0006972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489985.1;locus_tag=RM680_RS00565;product=hyperosmolarity resistance protein Ebh;pseudo=true;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	147902	148780	.	-	.	ID=gene-RM680_RS00570;Name=RM680_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00570;old_locus_tag=RM680_00570
NZ_JAVRJI010000001.1	Protein Homology	CDS	147902	148780	.	-	0	ID=cds-WP_001830929.1;Parent=gene-RM680_RS00570;Dbxref=GenBank:WP_001830929.1;Name=WP_001830929.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830929.1;locus_tag=RM680_RS00570;product=5'-3' exonuclease;protein_id=WP_001830929.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	148799	152236	.	-	.	ID=gene-RM680_RS00575;Name=RM680_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00575;old_locus_tag=RM680_00575
NZ_JAVRJI010000001.1	Protein Homology	CDS	148799	152236	.	-	0	ID=cds-WP_311563492.1;Parent=gene-RM680_RS00575;Dbxref=GenBank:WP_311563492.1;Name=WP_311563492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020359939.1;locus_tag=RM680_RS00575;product=dynamin family protein;protein_id=WP_311563492.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	152614	153252	.	-	.	ID=gene-RM680_RS00580;Name=RM680_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00580;old_locus_tag=RM680_00580
NZ_JAVRJI010000001.1	Protein Homology	CDS	152614	153252	.	-	0	ID=cds-WP_001831317.1;Parent=gene-RM680_RS00580;Dbxref=GenBank:WP_001831317.1;Name=WP_001831317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831317.1;locus_tag=RM680_RS00580;product=SDR family oxidoreductase;protein_id=WP_001831317.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	153420	154556	.	-	.	ID=gene-RM680_RS00585;Name=RM680_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00585;old_locus_tag=RM680_00585
NZ_JAVRJI010000001.1	Protein Homology	CDS	153420	154556	.	-	0	ID=cds-WP_002467706.1;Parent=gene-RM680_RS00585;Dbxref=GenBank:WP_002467706.1;Name=WP_002467706.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446454.1;locus_tag=RM680_RS00585;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_002467706.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	154746	155129	.	-	.	ID=gene-RM680_RS00590;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=RM680_RS00590;old_locus_tag=RM680_00590
NZ_JAVRJI010000001.1	cmsearch	RNase_P_RNA	154746	155129	.	-	.	ID=rna-RM680_RS00590;Parent=gene-RM680_RS00590;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS00590;product=RNase P RNA component class B
NZ_JAVRJI010000001.1	cmsearch	exon	154746	155129	.	-	.	ID=exon-RM680_RS00590-1;Parent=rna-RM680_RS00590;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS00590;product=RNase P RNA component class B
NZ_JAVRJI010000001.1	RefSeq	gene	155198	155536	.	-	.	ID=gene-RM680_RS00595;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=RM680_RS00595;old_locus_tag=RM680_00595
NZ_JAVRJI010000001.1	Protein Homology	CDS	155198	155536	.	-	0	ID=cds-WP_001831034.1;Parent=gene-RM680_RS00595;Dbxref=GenBank:WP_001831034.1;Name=WP_001831034.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499980.1;locus_tag=RM680_RS00595;product=cell division regulator GpsB;protein_id=WP_001831034.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	155550	156116	.	-	.	ID=gene-RM680_RS00600;Name=RM680_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00600;old_locus_tag=RM680_00600
NZ_JAVRJI010000001.1	Protein Homology	CDS	155550	156116	.	-	0	ID=cds-WP_002456190.1;Parent=gene-RM680_RS00600;Dbxref=GenBank:WP_002456190.1;Name=WP_002456190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433797.1;locus_tag=RM680_RS00600;product=DUF1273 domain-containing protein;protein_id=WP_002456190.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	156128	156460	.	-	.	ID=gene-RM680_RS00605;Name=RM680_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00605;old_locus_tag=RM680_00605
NZ_JAVRJI010000001.1	Protein Homology	CDS	156128	156460	.	-	0	ID=cds-WP_002439773.1;Parent=gene-RM680_RS00605;Dbxref=GenBank:WP_002439773.1;Name=WP_002439773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831244.1;locus_tag=RM680_RS00605;product=YppE family protein;protein_id=WP_002439773.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	156804	157430	.	+	.	ID=gene-RM680_RS00610;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=RM680_RS00610;old_locus_tag=RM680_00610
NZ_JAVRJI010000001.1	Protein Homology	CDS	156804	157430	.	+	0	ID=cds-WP_002495428.1;Parent=gene-RM680_RS00610;Dbxref=GenBank:WP_002495428.1;Name=WP_002495428.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834552.1;locus_tag=RM680_RS00610;product=Holliday junction resolvase RecU;protein_id=WP_002495428.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	157427	159661	.	+	.	ID=gene-RM680_RS00615;Name=RM680_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00615;old_locus_tag=RM680_00615
NZ_JAVRJI010000001.1	Protein Homology	CDS	157427	159661	.	+	0	ID=cds-WP_002439777.1;Parent=gene-RM680_RS00615;Dbxref=GenBank:WP_002439777.1;Name=WP_002439777.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0008955,GO:0016757;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,glycosyltransferase activity|0016757||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503333.1;locus_tag=RM680_RS00615;product=transglycosylase domain-containing protein;protein_id=WP_002439777.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	159851	160183	.	-	.	ID=gene-RM680_RS00620;Name=RM680_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00620;old_locus_tag=RM680_00620
NZ_JAVRJI010000001.1	Protein Homology	CDS	159851	160183	.	-	0	ID=cds-WP_001831277.1;Parent=gene-RM680_RS00620;Dbxref=GenBank:WP_001831277.1;Name=WP_001831277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473655.1;locus_tag=RM680_RS00620;product=YpoC family protein;protein_id=WP_001831277.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	160188	160847	.	-	.	ID=gene-RM680_RS00625;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=RM680_RS00625;old_locus_tag=RM680_00625
NZ_JAVRJI010000001.1	Protein Homology	CDS	160188	160847	.	-	0	ID=cds-WP_002500503.1;Parent=gene-RM680_RS00625;Dbxref=GenBank:WP_002500503.1;Name=WP_002500503.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499987.1;locus_tag=RM680_RS00625;product=endonuclease III;protein_id=WP_002500503.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	160837	161523	.	-	.	ID=gene-RM680_RS00630;Name=RM680_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00630;old_locus_tag=RM680_00630
NZ_JAVRJI010000001.1	Protein Homology	CDS	160837	161523	.	-	0	ID=cds-WP_001831014.1;Parent=gene-RM680_RS00630;Dbxref=GenBank:WP_001831014.1;Name=WP_001831014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499988.1;locus_tag=RM680_RS00630;product=DnaD domain-containing protein;protein_id=WP_001831014.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	161616	162908	.	-	.	ID=gene-RM680_RS00635;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=RM680_RS00635;old_locus_tag=RM680_00635
NZ_JAVRJI010000001.1	Protein Homology	CDS	161616	162908	.	-	0	ID=cds-WP_002439780.1;Parent=gene-RM680_RS00635;Dbxref=GenBank:WP_002439780.1;Name=WP_002439780.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499989.1;locus_tag=RM680_RS00635;product=asparagine--tRNA ligase;protein_id=WP_002439780.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	163029	165737	.	-	.	ID=gene-RM680_RS00640;Name=RM680_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00640;old_locus_tag=RM680_00640
NZ_JAVRJI010000001.1	Protein Homology	CDS	163029	165737	.	-	0	ID=cds-WP_020368318.1;Parent=gene-RM680_RS00640;Dbxref=GenBank:WP_020368318.1;Name=WP_020368318.1;Ontology_term=GO:0006139,GO:0003676,GO:0004386,GO:0005524,GO:0016818;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500984.1;locus_tag=RM680_RS00640;product=helicase C-terminal domain-containing protein;protein_id=WP_020368318.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	165762	166733	.	-	.	ID=gene-RM680_RS00645;Name=RM680_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00645;old_locus_tag=RM680_00645
NZ_JAVRJI010000001.1	Protein Homology	CDS	165762	166733	.	-	0	ID=cds-WP_001831050.1;Parent=gene-RM680_RS00645;Dbxref=GenBank:WP_001831050.1;Name=WP_001831050.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473603.1;locus_tag=RM680_RS00645;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_001831050.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	166720	167922	.	-	.	ID=gene-RM680_RS00650;Name=RM680_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00650;old_locus_tag=RM680_00650
NZ_JAVRJI010000001.1	Protein Homology	CDS	166720	167922	.	-	0	ID=cds-WP_001831104.1;Parent=gene-RM680_RS00650;Dbxref=GenBank:WP_001831104.1;Name=WP_001831104.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831104.1;locus_tag=RM680_RS00650;product=CCA tRNA nucleotidyltransferase;protein_id=WP_001831104.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	167912	169054	.	-	.	ID=gene-RM680_RS00655;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=RM680_RS00655;old_locus_tag=RM680_00655
NZ_JAVRJI010000001.1	Protein Homology	CDS	167912	169054	.	-	0	ID=cds-WP_001831222.1;Parent=gene-RM680_RS00655;Dbxref=GenBank:WP_001831222.1;Name=WP_001831222.1;Ontology_term=GO:0071793,GO:0016757;gbkey=CDS;gene=bshA;go_function=glycosyltransferase activity|0016757||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831222.1;locus_tag=RM680_RS00655;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=WP_001831222.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	169076	169393	.	-	.	ID=gene-RM680_RS00660;Name=RM680_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00660;old_locus_tag=RM680_00660
NZ_JAVRJI010000001.1	Protein Homology	CDS	169076	169393	.	-	0	ID=cds-WP_001832769.1;Parent=gene-RM680_RS00660;Dbxref=GenBank:WP_001832769.1;Name=WP_001832769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499994.1;locus_tag=RM680_RS00660;product=nucleotide pyrophosphohydrolase;protein_id=WP_001832769.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	169573	170268	.	-	.	ID=gene-RM680_RS00665;Name=RM680_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00665;old_locus_tag=RM680_00665
NZ_JAVRJI010000001.1	Protein Homology	CDS	169573	170268	.	-	0	ID=cds-WP_001831045.1;Parent=gene-RM680_RS00665;Dbxref=GenBank:WP_001831045.1;Name=WP_001831045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831045.1;locus_tag=RM680_RS00665;product=zinc metallopeptidase;protein_id=WP_001831045.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	170313	170906	.	-	.	ID=gene-RM680_RS00670;Name=RM680_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00670;old_locus_tag=RM680_00670
NZ_JAVRJI010000001.1	Protein Homology	CDS	170313	170906	.	-	0	ID=cds-WP_001831230.1;Parent=gene-RM680_RS00670;Dbxref=GenBank:WP_001831230.1;Name=WP_001831230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468384.1;locus_tag=RM680_RS00670;product=DUF1405 domain-containing protein;protein_id=WP_001831230.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	170918	171481	.	-	.	ID=gene-RM680_RS00675;Name=RM680_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00675;old_locus_tag=RM680_00675
NZ_JAVRJI010000001.1	Protein Homology	CDS	170918	171481	.	-	0	ID=cds-WP_001831161.1;Parent=gene-RM680_RS00675;Dbxref=GenBank:WP_001831161.1;Name=WP_001831161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012098999.1;locus_tag=RM680_RS00675;product=YpiB family protein;protein_id=WP_001831161.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	171495	172739	.	-	.	ID=gene-RM680_RS00680;Name=RM680_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00680;old_locus_tag=RM680_00680
NZ_JAVRJI010000001.1	Protein Homology	CDS	171495	172739	.	-	0	ID=cds-WP_001831060.1;Parent=gene-RM680_RS00680;Dbxref=GenBank:WP_001831060.1;Name=WP_001831060.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831060.1;locus_tag=RM680_RS00680;product=tetratricopeptide repeat protein;protein_id=WP_001831060.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	172743	174044	.	-	.	ID=gene-RM680_RS00685;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=RM680_RS00685;old_locus_tag=RM680_00685
NZ_JAVRJI010000001.1	Protein Homology	CDS	172743	174044	.	-	0	ID=cds-WP_001831249.1;Parent=gene-RM680_RS00685;Dbxref=GenBank:WP_001831249.1;Name=WP_001831249.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503337.1;locus_tag=RM680_RS00685;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_001831249.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	174054	175118	.	-	.	ID=gene-RM680_RS00690;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=RM680_RS00690;old_locus_tag=RM680_00690
NZ_JAVRJI010000001.1	Protein Homology	CDS	174054	175118	.	-	0	ID=cds-WP_020368319.1;Parent=gene-RM680_RS00690;Dbxref=GenBank:WP_020368319.1;Name=WP_020368319.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368319.1;locus_tag=RM680_RS00690;product=3-dehydroquinate synthase;protein_id=WP_020368319.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	175146	176312	.	-	.	ID=gene-RM680_RS00695;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=RM680_RS00695;old_locus_tag=RM680_00695
NZ_JAVRJI010000001.1	Protein Homology	CDS	175146	176312	.	-	0	ID=cds-WP_001831020.1;Parent=gene-RM680_RS00695;Dbxref=GenBank:WP_001831020.1;Name=WP_001831020.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500001.1;locus_tag=RM680_RS00695;product=chorismate synthase;protein_id=WP_001831020.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	176793	177242	.	-	.	ID=gene-RM680_RS00700;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=RM680_RS00700;old_locus_tag=RM680_00700
NZ_JAVRJI010000001.1	Protein Homology	CDS	176793	177242	.	-	0	ID=cds-WP_001831235.1;Parent=gene-RM680_RS00700;Dbxref=GenBank:WP_001831235.1;Name=WP_001831235.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463054.1;locus_tag=RM680_RS00700;product=nucleoside-diphosphate kinase;protein_id=WP_001831235.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	177382	178341	.	-	.	ID=gene-RM680_RS00705;Name=RM680_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00705;old_locus_tag=RM680_00705
NZ_JAVRJI010000001.1	Protein Homology	CDS	177382	178341	.	-	0	ID=cds-WP_001831120.1;Parent=gene-RM680_RS00705;Dbxref=GenBank:WP_001831120.1;Name=WP_001831120.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368525.1;locus_tag=RM680_RS00705;product=polyprenyl synthetase family protein;protein_id=WP_001831120.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	178343	179068	.	-	.	ID=gene-RM680_RS00710;Name=RM680_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00710;old_locus_tag=RM680_00710
NZ_JAVRJI010000001.1	Protein Homology	CDS	178343	179068	.	-	0	ID=cds-WP_001831089.1;Parent=gene-RM680_RS00710;Dbxref=GenBank:WP_001831089.1;Name=WP_001831089.1;Ontology_term=GO:0009234,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476783.1;locus_tag=RM680_RS00710;product=demethylmenaquinone methyltransferase;protein_id=WP_001831089.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	179061	179639	.	-	.	ID=gene-RM680_RS00715;Name=RM680_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00715;old_locus_tag=RM680_00715
NZ_JAVRJI010000001.1	Protein Homology	CDS	179061	179639	.	-	0	ID=cds-WP_001831003.1;Parent=gene-RM680_RS00715;Dbxref=GenBank:WP_001831003.1;Name=WP_001831003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493593.1;locus_tag=RM680_RS00715;product=hypothetical protein;protein_id=WP_001831003.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	180109	180381	.	-	.	ID=gene-RM680_RS00720;Name=RM680_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00720;old_locus_tag=RM680_00720
NZ_JAVRJI010000001.1	Protein Homology	CDS	180109	180381	.	-	0	ID=cds-WP_001043863.1;Parent=gene-RM680_RS00720;Dbxref=GenBank:WP_001043863.1;Name=WP_001043863.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=RM680_RS00720;product=HU family DNA-binding protein;protein_id=WP_001043863.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	180552	181550	.	-	.	ID=gene-RM680_RS00725;Name=RM680_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00725;old_locus_tag=RM680_00725
NZ_JAVRJI010000001.1	Protein Homology	CDS	180552	181550	.	-	0	ID=cds-WP_001831154.1;Parent=gene-RM680_RS00725;Dbxref=GenBank:WP_001831154.1;Name=WP_001831154.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500009.1;locus_tag=RM680_RS00725;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_001831154.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	181571	182881	.	-	.	ID=gene-RM680_RS00730;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=RM680_RS00730;old_locus_tag=RM680_00730
NZ_JAVRJI010000001.1	Protein Homology	CDS	181571	182881	.	-	0	ID=cds-WP_001831042.1;Parent=gene-RM680_RS00730;Dbxref=GenBank:WP_001831042.1;Name=WP_001831042.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=RM680_RS00730;product=ribosome biogenesis GTPase Der;protein_id=WP_001831042.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	183097	184275	.	-	.	ID=gene-RM680_RS00735;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=RM680_RS00735;old_locus_tag=RM680_00735
NZ_JAVRJI010000001.1	Protein Homology	CDS	183097	184275	.	-	0	ID=cds-WP_001831057.1;Parent=gene-RM680_RS00735;Dbxref=GenBank:WP_001831057.1;Name=WP_001831057.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831057.1;locus_tag=RM680_RS00735;product=30S ribosomal protein S1;protein_id=WP_001831057.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	184759	185406	.	-	.	ID=gene-RM680_RS00740;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=RM680_RS00740;old_locus_tag=RM680_00740
NZ_JAVRJI010000001.1	Protein Homology	CDS	184759	185406	.	-	0	ID=cds-WP_001830943.1;Parent=gene-RM680_RS00740;Dbxref=GenBank:WP_001830943.1;Name=WP_001830943.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476787.1;locus_tag=RM680_RS00740;product=(d)CMP kinase;protein_id=WP_001830943.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	185485	186453	.	+	.	ID=gene-RM680_RS00745;Name=RM680_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00745;old_locus_tag=RM680_00745
NZ_JAVRJI010000001.1	Protein Homology	CDS	185485	186453	.	+	0	ID=cds-WP_001831213.1;Parent=gene-RM680_RS00745;Dbxref=GenBank:WP_001831213.1;Name=WP_001831213.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363133.1;locus_tag=RM680_RS00745;product=asparaginase;protein_id=WP_001831213.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	186665	187651	.	-	.	ID=gene-RM680_RS00750;Name=ypdA;gbkey=Gene;gene=ypdA;gene_biotype=protein_coding;locus_tag=RM680_RS00750;old_locus_tag=RM680_00750
NZ_JAVRJI010000001.1	Protein Homology	CDS	186665	187651	.	-	0	ID=cds-WP_001831121.1;Parent=gene-RM680_RS00750;Dbxref=GenBank:WP_001831121.1;Name=WP_001831121.1;gbkey=CDS;gene=ypdA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500017.1;locus_tag=RM680_RS00750;product=bacillithiol disulfide reductase YpdA;protein_id=WP_001831121.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	187784	189166	.	-	.	ID=gene-RM680_RS00755;Name=ebpS;gbkey=Gene;gene=ebpS;gene_biotype=protein_coding;locus_tag=RM680_RS00755;old_locus_tag=RM680_00755
NZ_JAVRJI010000001.1	Protein Homology	CDS	187784	189166	.	-	0	ID=cds-WP_142588335.1;Parent=gene-RM680_RS00755;Dbxref=GenBank:WP_142588335.1;Name=WP_142588335.1;gbkey=CDS;gene=ebpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500988.1;locus_tag=RM680_RS00755;product=elastin-binding protein EbpS;protein_id=WP_142588335.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	189323	190702	.	-	.	ID=gene-RM680_RS00760;Name=RM680_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00760;old_locus_tag=RM680_00760
NZ_JAVRJI010000001.1	Protein Homology	CDS	189323	190702	.	-	0	ID=cds-WP_001831100.1;Parent=gene-RM680_RS00760;Dbxref=GenBank:WP_001831100.1;Name=WP_001831100.1;Ontology_term=GO:0006281,GO:0003677,GO:0005524,GO:0016887,GO:0043138;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,3'-5' DNA helicase activity|0043138||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464202.1;locus_tag=RM680_RS00760;product=RecQ family ATP-dependent DNA helicase;protein_id=WP_001831100.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	190689	191651	.	-	.	ID=gene-RM680_RS00765;Name=RM680_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00765;old_locus_tag=RM680_00765
NZ_JAVRJI010000001.1	Protein Homology	CDS	190689	191651	.	-	0	ID=cds-WP_002456188.1;Parent=gene-RM680_RS00765;Dbxref=GenBank:WP_002456188.1;Name=WP_002456188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486993.1;locus_tag=RM680_RS00765;product=helix-turn-helix domain-containing protein;protein_id=WP_002456188.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	191760	192008	.	+	.	ID=gene-RM680_RS00770;Name=RM680_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00770;old_locus_tag=RM680_00770
NZ_JAVRJI010000001.1	Protein Homology	CDS	191760	192008	.	+	0	ID=cds-WP_001831262.1;Parent=gene-RM680_RS00770;Dbxref=GenBank:WP_001831262.1;Name=WP_001831262.1;Ontology_term=GO:0005506,GO:0009055;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449743.1;locus_tag=RM680_RS00770;product=ferredoxin;protein_id=WP_001831262.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	192413	192952	.	-	.	ID=gene-RM680_RS00775;Name=RM680_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00775;old_locus_tag=RM680_00775
NZ_JAVRJI010000001.1	Protein Homology	CDS	192413	192952	.	-	0	ID=cds-WP_002495433.1;Parent=gene-RM680_RS00775;Dbxref=GenBank:WP_002495433.1;Name=WP_002495433.1;Ontology_term=GO:0032218,GO:0032217;gbkey=CDS;go_function=riboflavin transmembrane transporter activity|0032217||IEA;go_process=riboflavin transport|0032218||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830988.1;locus_tag=RM680_RS00775;product=ECF transporter S component;protein_id=WP_002495433.1;transl_table=11
NZ_JAVRJI010000001.1	cmsearch	riboswitch	193015	193150	.	-	.	ID=id-NZ_JAVRJI010000001.1:193015..193150;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000001.1	RefSeq	gene	193544	195310	.	-	.	ID=gene-RM680_RS00780;Name=RM680_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00780;old_locus_tag=RM680_00780
NZ_JAVRJI010000001.1	Protein Homology	CDS	193544	195310	.	-	0	ID=cds-WP_001831150.1;Parent=gene-RM680_RS00780;Dbxref=GenBank:WP_001831150.1;Name=WP_001831150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503152.1;locus_tag=RM680_RS00780;product=ATP-binding protein;protein_id=WP_001831150.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	195294	196019	.	-	.	ID=gene-RM680_RS00785;Name=RM680_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00785;old_locus_tag=RM680_00785
NZ_JAVRJI010000001.1	Protein Homology	CDS	195294	196019	.	-	0	ID=cds-WP_001831066.1;Parent=gene-RM680_RS00785;Dbxref=GenBank:WP_001831066.1;Name=WP_001831066.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500101.1;locus_tag=RM680_RS00785;product=response regulator transcription factor;protein_id=WP_001831066.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	196153	196890	.	-	.	ID=gene-RM680_RS00790;Name=RM680_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00790;old_locus_tag=RM680_00790
NZ_JAVRJI010000001.1	Protein Homology	CDS	196153	196890	.	-	0	ID=cds-WP_001830978.1;Parent=gene-RM680_RS00790;Dbxref=GenBank:WP_001830978.1;Name=WP_001830978.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500102.1;locus_tag=RM680_RS00790;product=pseudouridine synthase;protein_id=WP_001830978.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	196883	197425	.	-	.	ID=gene-RM680_RS00795;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=RM680_RS00795;old_locus_tag=RM680_00795
NZ_JAVRJI010000001.1	Protein Homology	CDS	196883	197425	.	-	0	ID=cds-WP_001830975.1;Parent=gene-RM680_RS00795;Dbxref=GenBank:WP_001830975.1;Name=WP_001830975.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505498.1;locus_tag=RM680_RS00795;product=SMC-Scp complex subunit ScpB;protein_id=WP_001830975.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	197418	198149	.	-	.	ID=gene-RM680_RS00800;Name=RM680_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00800;old_locus_tag=RM680_00800
NZ_JAVRJI010000001.1	Protein Homology	CDS	197418	198149	.	-	0	ID=cds-WP_001831064.1;Parent=gene-RM680_RS00800;Dbxref=GenBank:WP_001831064.1;Name=WP_001831064.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500104.1;locus_tag=RM680_RS00800;product=segregation and condensation protein A;protein_id=WP_001831064.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	198247	198771	.	+	.	ID=gene-RM680_RS00805;Name=RM680_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00805;old_locus_tag=RM680_00805
NZ_JAVRJI010000001.1	Protein Homology	CDS	198247	198771	.	+	0	ID=cds-WP_001831156.1;Parent=gene-RM680_RS00805;Dbxref=GenBank:WP_001831156.1;Name=WP_001831156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497902.1;locus_tag=RM680_RS00805;product=DUF309 domain-containing protein;protein_id=WP_001831156.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	198824	199711	.	-	.	ID=gene-RM680_RS00810;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=RM680_RS00810;old_locus_tag=RM680_00810
NZ_JAVRJI010000001.1	Protein Homology	CDS	198824	199711	.	-	0	ID=cds-WP_001831286.1;Parent=gene-RM680_RS00810;Dbxref=GenBank:WP_001831286.1;Name=WP_001831286.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500106.1;locus_tag=RM680_RS00810;product=site-specific tyrosine recombinase XerD;protein_id=WP_001831286.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	199754	200203	.	-	.	ID=gene-RM680_RS00815;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=RM680_RS00815;old_locus_tag=RM680_00815
NZ_JAVRJI010000001.1	Protein Homology	CDS	199754	200203	.	-	0	ID=cds-WP_001831103.1;Parent=gene-RM680_RS00815;Dbxref=GenBank:WP_001831103.1;Name=WP_001831103.1;Ontology_term=GO:0006355,GO:0003700,GO:0008270;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446493.1;locus_tag=RM680_RS00815;product=ferric iron uptake transcriptional regulator;protein_id=WP_001831103.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	200308	200850	.	-	.	ID=gene-RM680_RS00820;Name=RM680_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00820;old_locus_tag=RM680_00820
NZ_JAVRJI010000001.1	Protein Homology	CDS	200308	200850	.	-	0	ID=cds-WP_001831173.1;Parent=gene-RM680_RS00820;Dbxref=GenBank:WP_001831173.1;Name=WP_001831173.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468381.1;locus_tag=RM680_RS00820;product=NUDIX hydrolase;protein_id=WP_001831173.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	200933	201841	.	+	.	ID=gene-RM680_RS00825;Name=RM680_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00825;old_locus_tag=RM680_00825
NZ_JAVRJI010000001.1	Protein Homology	CDS	200933	201841	.	+	0	ID=cds-WP_001831310.1;Parent=gene-RM680_RS00825;Dbxref=GenBank:WP_001831310.1;Name=WP_001831310.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464198.1;locus_tag=RM680_RS00825;product=aldo/keto reductase;protein_id=WP_001831310.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	202064	202822	.	-	.	ID=gene-RM680_RS00830;Name=RM680_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00830;old_locus_tag=RM680_00830
NZ_JAVRJI010000001.1	Protein Homology	CDS	202064	202822	.	-	0	ID=cds-WP_001831231.1;Parent=gene-RM680_RS00830;Dbxref=GenBank:WP_001831231.1;Name=WP_001831231.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475195.1;locus_tag=RM680_RS00830;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_001831231.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	202983	203798	.	+	.	ID=gene-RM680_RS00835;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=RM680_RS00835;old_locus_tag=RM680_00835
NZ_JAVRJI010000001.1	Protein Homology	CDS	202983	203798	.	+	0	ID=cds-WP_001831307.1;Parent=gene-RM680_RS00835;Dbxref=GenBank:WP_001831307.1;Name=WP_001831307.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485765.1;locus_tag=RM680_RS00835;product=pyrroline-5-carboxylate reductase;protein_id=WP_001831307.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	203848	204768	.	-	.	ID=gene-RM680_RS00840;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=RM680_RS00840;old_locus_tag=RM680_00840
NZ_JAVRJI010000001.1	Protein Homology	CDS	203848	204768	.	-	0	ID=cds-WP_001831008.1;Parent=gene-RM680_RS00840;Dbxref=GenBank:WP_001831008.1;Name=WP_001831008.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439993.1;locus_tag=RM680_RS00840;product=ribonuclease Z;protein_id=WP_001831008.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	205192	206676	.	+	.	ID=gene-RM680_RS00845;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=RM680_RS00845;old_locus_tag=RM680_00845
NZ_JAVRJI010000001.1	Protein Homology	CDS	205192	206676	.	+	0	ID=cds-WP_020368417.1;Parent=gene-RM680_RS00845;Dbxref=GenBank:WP_020368417.1;Name=WP_020368417.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368417.1;locus_tag=RM680_RS00845;product=glucose-6-phosphate dehydrogenase;protein_id=WP_020368417.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	206877	207758	.	+	.	ID=gene-RM680_RS00850;Name=RM680_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00850;old_locus_tag=RM680_00850
NZ_JAVRJI010000001.1	Protein Homology	CDS	206877	207758	.	+	0	ID=cds-WP_001831085.1;Parent=gene-RM680_RS00850;Dbxref=GenBank:WP_001831085.1;Name=WP_001831085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831085.1;locus_tag=RM680_RS00850;product=AraC family transcriptional regulator;protein_id=WP_001831085.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	208012	209667	.	-	.	ID=gene-RM680_RS00855;Name=RM680_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00855;old_locus_tag=RM680_00855
NZ_JAVRJI010000001.1	Protein Homology	CDS	208012	209667	.	-	0	ID=cds-WP_002456500.1;Parent=gene-RM680_RS00855;Dbxref=GenBank:WP_002456500.1;Name=WP_002456500.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470624.1;locus_tag=RM680_RS00855;product=glycoside hydrolase family 13 protein;protein_id=WP_002456500.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	209837	211243	.	-	.	ID=gene-RM680_RS00860;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=RM680_RS00860;old_locus_tag=RM680_00860
NZ_JAVRJI010000001.1	Protein Homology	CDS	209837	211243	.	-	0	ID=cds-WP_002440000.1;Parent=gene-RM680_RS00860;Dbxref=GenBank:WP_002440000.1;Name=WP_002440000.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500120.1;locus_tag=RM680_RS00860;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_002440000.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	211323	212447	.	-	.	ID=gene-RM680_RS00865;Name=RM680_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00865;old_locus_tag=RM680_00865
NZ_JAVRJI010000001.1	Protein Homology	CDS	211323	212447	.	-	0	ID=cds-WP_020368072.1;Parent=gene-RM680_RS00865;Dbxref=GenBank:WP_020368072.1;Name=WP_020368072.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012083654.1;locus_tag=RM680_RS00865;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_020368072.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	212678	212773	.	+	.	ID=gene-RM680_RS00870;Name=prli42;gbkey=Gene;gene=prli42;gene_biotype=protein_coding;locus_tag=RM680_RS00870;old_locus_tag=RM680_00870
NZ_JAVRJI010000001.1	Protein Homology	CDS	212678	212773	.	+	0	ID=cds-WP_002493579.1;Parent=gene-RM680_RS00870;Dbxref=GenBank:WP_002493579.1;Name=WP_002493579.1;gbkey=CDS;gene=prli42;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493579.1;locus_tag=RM680_RS00870;product=stressosome-associated protein Prli42;protein_id=WP_002493579.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	212825	213802	.	-	.	ID=gene-RM680_RS00875;Name=RM680_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00875;old_locus_tag=RM680_00875
NZ_JAVRJI010000001.1	Protein Homology	CDS	212825	213802	.	-	0	ID=cds-WP_002440004.1;Parent=gene-RM680_RS00875;Dbxref=GenBank:WP_002440004.1;Name=WP_002440004.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476807.1;locus_tag=RM680_RS00875;product=aromatic acid exporter family protein;protein_id=WP_002440004.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	213815	214252	.	-	.	ID=gene-RM680_RS00880;Name=brxB;gbkey=Gene;gene=brxB;gene_biotype=protein_coding;locus_tag=RM680_RS00880;old_locus_tag=RM680_00880
NZ_JAVRJI010000001.1	Protein Homology	CDS	213815	214252	.	-	0	ID=cds-WP_002487660.1;Parent=gene-RM680_RS00880;Dbxref=GenBank:WP_002487660.1;Name=WP_002487660.1;gbkey=CDS;gene=brxB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500125.1;locus_tag=RM680_RS00880;product=bacilliredoxin BrxB;protein_id=WP_002487660.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	214457	215776	.	-	.	ID=gene-RM680_RS00885;Name=RM680_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00885;old_locus_tag=RM680_00885
NZ_JAVRJI010000001.1	Protein Homology	CDS	214457	215776	.	-	0	ID=cds-WP_002487679.1;Parent=gene-RM680_RS00885;Dbxref=GenBank:WP_002487679.1;Name=WP_002487679.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496868.1;locus_tag=RM680_RS00885;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_002487679.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	215789	216772	.	-	.	ID=gene-RM680_RS00890;Name=RM680_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00890;old_locus_tag=RM680_00890
NZ_JAVRJI010000001.1	Protein Homology	CDS	215789	216772	.	-	0	ID=cds-WP_001830933.1;Parent=gene-RM680_RS00890;Dbxref=GenBank:WP_001830933.1;Name=WP_001830933.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500127.1;locus_tag=RM680_RS00890;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_001830933.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	216765	217763	.	-	.	ID=gene-RM680_RS00895;Name=RM680_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00895;old_locus_tag=RM680_00895
NZ_JAVRJI010000001.1	Protein Homology	CDS	216765	217763	.	-	0	ID=cds-WP_001831036.1;Parent=gene-RM680_RS00895;Dbxref=GenBank:WP_001831036.1;Name=WP_001831036.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012083651.1;locus_tag=RM680_RS00895;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_001831036.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	217778	219199	.	-	.	ID=gene-RM680_RS00900;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=RM680_RS00900;old_locus_tag=RM680_00900
NZ_JAVRJI010000001.1	Protein Homology	CDS	217778	219199	.	-	0	ID=cds-WP_002440012.1;Parent=gene-RM680_RS00900;Dbxref=GenBank:WP_002440012.1;Name=WP_002440012.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830939.1;locus_tag=RM680_RS00900;product=dihydrolipoyl dehydrogenase;protein_id=WP_002440012.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	219459	221135	.	-	.	ID=gene-RM680_RS00905;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=RM680_RS00905;old_locus_tag=RM680_00905
NZ_JAVRJI010000001.1	Protein Homology	CDS	219459	221135	.	-	0	ID=cds-WP_002487672.1;Parent=gene-RM680_RS00905;Dbxref=GenBank:WP_002487672.1;Name=WP_002487672.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468404.1;locus_tag=RM680_RS00905;product=DNA repair protein RecN;protein_id=WP_002487672.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	221151	221603	.	-	.	ID=gene-RM680_RS00910;Name=ahrC;gbkey=Gene;gene=ahrC;gene_biotype=protein_coding;gene_synonym=argR;locus_tag=RM680_RS00910;old_locus_tag=RM680_00910
NZ_JAVRJI010000001.1	Protein Homology	CDS	221151	221603	.	-	0	ID=cds-WP_002456185.1;Parent=gene-RM680_RS00910;Dbxref=GenBank:WP_002456185.1;Name=WP_002456185.1;Ontology_term=GO:0006355,GO:0003700,GO:0034618;gbkey=CDS;gene=ahrC;go_function=DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500131.1;locus_tag=RM680_RS00910;product=transcriptional regulator AhrC/ArgR;protein_id=WP_002456185.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	221918	222799	.	-	.	ID=gene-RM680_RS00915;Name=RM680_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00915;old_locus_tag=RM680_00915
NZ_JAVRJI010000001.1	Protein Homology	CDS	221918	222799	.	-	0	ID=cds-WP_002456496.1;Parent=gene-RM680_RS00915;Dbxref=GenBank:WP_002456496.1;Name=WP_002456496.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503987.1;locus_tag=RM680_RS00915;product=polyprenyl synthetase family protein;protein_id=WP_002456496.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	222777	223007	.	-	.	ID=gene-RM680_RS00920;Name=RM680_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00920;old_locus_tag=RM680_00920
NZ_JAVRJI010000001.1	Protein Homology	CDS	222777	223007	.	-	0	ID=cds-WP_001830935.1;Parent=gene-RM680_RS00920;Dbxref=GenBank:WP_001830935.1;Name=WP_001830935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500133.1;locus_tag=RM680_RS00920;product=exodeoxyribonuclease VII small subunit;protein_id=WP_001830935.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	223000	224337	.	-	.	ID=gene-RM680_RS00925;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=RM680_RS00925;old_locus_tag=RM680_00925
NZ_JAVRJI010000001.1	Protein Homology	CDS	223000	224337	.	-	0	ID=cds-WP_311563493.1;Parent=gene-RM680_RS00925;Dbxref=GenBank:WP_311563493.1;Name=WP_311563493.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500134.1;locus_tag=RM680_RS00925;product=exodeoxyribonuclease VII large subunit;protein_id=WP_311563493.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	224352	224741	.	-	.	ID=gene-RM680_RS00930;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=RM680_RS00930;old_locus_tag=RM680_00930
NZ_JAVRJI010000001.1	Protein Homology	CDS	224352	224741	.	-	0	ID=cds-WP_001831090.1;Parent=gene-RM680_RS00930;Dbxref=GenBank:WP_001831090.1;Name=WP_001831090.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473744.1;locus_tag=RM680_RS00930;product=transcription antitermination factor NusB;protein_id=WP_001831090.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	224817	225179	.	-	.	ID=gene-RM680_RS00935;Name=RM680_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00935;old_locus_tag=RM680_00935
NZ_JAVRJI010000001.1	Protein Homology	CDS	224817	225179	.	-	0	ID=cds-WP_002440021.1;Parent=gene-RM680_RS00935;Dbxref=GenBank:WP_002440021.1;Name=WP_002440021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500136.1;locus_tag=RM680_RS00935;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_002440021.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	225191	226549	.	-	.	ID=gene-RM680_RS00940;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=RM680_RS00940;old_locus_tag=RM680_00940
NZ_JAVRJI010000001.1	Protein Homology	CDS	225191	226549	.	-	0	ID=cds-WP_002440022.1;Parent=gene-RM680_RS00940;Dbxref=GenBank:WP_002440022.1;Name=WP_002440022.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440022.1;locus_tag=RM680_RS00940;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002440022.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	226549	227016	.	-	.	ID=gene-RM680_RS00945;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=RM680_RS00945;old_locus_tag=RM680_00945
NZ_JAVRJI010000001.1	Protein Homology	CDS	226549	227016	.	-	0	ID=cds-WP_002484882.1;Parent=gene-RM680_RS00945;Dbxref=GenBank:WP_002484882.1;Name=WP_002484882.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473583.1;locus_tag=RM680_RS00945;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_002484882.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	227274	228404	.	-	.	ID=gene-RM680_RS00950;Name=RM680_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00950;old_locus_tag=RM680_00950
NZ_JAVRJI010000001.1	Protein Homology	CDS	227274	228404	.	-	0	ID=cds-WP_002484881.1;Parent=gene-RM680_RS00950;Dbxref=GenBank:WP_002484881.1;Name=WP_002484881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468437.1;locus_tag=RM680_RS00950;product=acetylornithine transaminase;protein_id=WP_002484881.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	228404	229141	.	-	.	ID=gene-RM680_RS00955;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=RM680_RS00955;old_locus_tag=RM680_00955
NZ_JAVRJI010000001.1	Protein Homology	CDS	228404	229141	.	-	0	ID=cds-WP_001830946.1;Parent=gene-RM680_RS00955;Dbxref=GenBank:WP_001830946.1;Name=WP_001830946.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446518.1;locus_tag=RM680_RS00955;product=acetylglutamate kinase;protein_id=WP_001830946.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	229151	230344	.	-	.	ID=gene-RM680_RS00960;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=RM680_RS00960;old_locus_tag=RM680_00960
NZ_JAVRJI010000001.1	Protein Homology	CDS	229151	230344	.	-	0	ID=cds-WP_001831095.1;Parent=gene-RM680_RS00960;Dbxref=GenBank:WP_001831095.1;Name=WP_001831095.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-L-ornithine as donor|0004358||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473742.1;locus_tag=RM680_RS00960;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_001831095.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	230363	231388	.	-	.	ID=gene-RM680_RS00965;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=RM680_RS00965;old_locus_tag=RM680_00965
NZ_JAVRJI010000001.1	Protein Homology	CDS	230363	231388	.	-	0	ID=cds-WP_002440029.1;Parent=gene-RM680_RS00965;Dbxref=GenBank:WP_002440029.1;Name=WP_002440029.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830986.1;locus_tag=RM680_RS00965;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_002440029.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	231538	232095	.	-	.	ID=gene-RM680_RS00970;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=RM680_RS00970;old_locus_tag=RM680_00970
NZ_JAVRJI010000001.1	Protein Homology	CDS	231538	232095	.	-	0	ID=cds-WP_001831269.1;Parent=gene-RM680_RS00970;Dbxref=GenBank:WP_001831269.1;Name=WP_001831269.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000626504.1;locus_tag=RM680_RS00970;product=elongation factor P;protein_id=WP_001831269.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	232122	233183	.	-	.	ID=gene-RM680_RS00975;Name=RM680_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00975;old_locus_tag=RM680_00975
NZ_JAVRJI010000001.1	Protein Homology	CDS	232122	233183	.	-	0	ID=cds-WP_001831174.1;Parent=gene-RM680_RS00975;Dbxref=GenBank:WP_001831174.1;Name=WP_001831174.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020364170.1;locus_tag=RM680_RS00975;product=M24 family metallopeptidase;protein_id=WP_001831174.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	233286	233864	.	+	.	ID=gene-RM680_RS00980;Name=RM680_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00980;old_locus_tag=RM680_00980
NZ_JAVRJI010000001.1	Protein Homology	CDS	233286	233864	.	+	0	ID=cds-WP_001831193.1;Parent=gene-RM680_RS00980;Dbxref=GenBank:WP_001831193.1;Name=WP_001831193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490955.1;locus_tag=RM680_RS00980;product=hypothetical protein;protein_id=WP_001831193.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	233878	234096	.	+	.	ID=gene-RM680_RS00985;Name=RM680_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00985;old_locus_tag=RM680_00985
NZ_JAVRJI010000001.1	Protein Homology	CDS	233878	234096	.	+	0	ID=cds-WP_001831076.1;Parent=gene-RM680_RS00985;Dbxref=GenBank:WP_001831076.1;Name=WP_001831076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501003.1;locus_tag=RM680_RS00985;product=SA1362 family protein;protein_id=WP_001831076.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	234137	234967	.	-	.	ID=gene-RM680_RS00990;Name=RM680_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00990;old_locus_tag=RM680_00990
NZ_JAVRJI010000001.1	Protein Homology	CDS	234137	234967	.	-	0	ID=cds-WP_001830993.1;Parent=gene-RM680_RS00990;Dbxref=GenBank:WP_001830993.1;Name=WP_001830993.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500143.1;locus_tag=RM680_RS00990;product=lipoate--protein ligase family protein;protein_id=WP_001830993.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	235127	235513	.	+	.	ID=gene-RM680_RS00995;Name=RM680_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS00995;old_locus_tag=RM680_00995
NZ_JAVRJI010000001.1	Protein Homology	CDS	235127	235513	.	+	0	ID=cds-WP_001831303.1;Parent=gene-RM680_RS00995;Dbxref=GenBank:WP_001831303.1;Name=WP_001831303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500144.1;locus_tag=RM680_RS00995;product=rhodanese-like domain-containing protein;protein_id=WP_001831303.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	pseudogene	235612	235954	.	-	.	ID=gene-RM680_RS01000;Name=RM680_RS01000;end_range=235954,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS01000;old_locus_tag=RM680_01000;partial=true;pseudo=true
NZ_JAVRJI010000001.1	Protein Homology	CDS	235612	235954	.	-	0	ID=cds-RM680_RS01000;Parent=gene-RM680_RS01000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=235954,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830915.1;locus_tag=RM680_RS01000;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	236405	237913	.	-	.	ID=gene-RM680_RS01005;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=RM680_RS01005;old_locus_tag=RM680_01005
NZ_JAVRJI010000001.1	Protein Homology	CDS	236405	237913	.	-	0	ID=cds-WP_002468434.1;Parent=gene-RM680_RS01005;Dbxref=GenBank:WP_002468434.1;Name=WP_002468434.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502375.1;locus_tag=RM680_RS01005;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WP_002468434.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	237906	239252	.	-	.	ID=gene-RM680_RS01010;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=RM680_RS01010;old_locus_tag=RM680_01010
NZ_JAVRJI010000001.1	Protein Homology	CDS	237906	239252	.	-	0	ID=cds-WP_002456181.1;Parent=gene-RM680_RS01010;Dbxref=GenBank:WP_002456181.1;Name=WP_002456181.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500146.1;locus_tag=RM680_RS01010;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WP_002456181.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	239272	240363	.	-	.	ID=gene-RM680_RS01015;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=RM680_RS01015;old_locus_tag=RM680_01015
NZ_JAVRJI010000001.1	Protein Homology	CDS	239272	240363	.	-	0	ID=cds-WP_001831107.1;Parent=gene-RM680_RS01015;Dbxref=GenBank:WP_001831107.1;Name=WP_001831107.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500147.1;locus_tag=RM680_RS01015;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_001831107.1;transl_table=11
NZ_JAVRJI010000001.1	cmsearch	riboswitch	240442	240584	.	-	.	ID=id-NZ_JAVRJI010000001.1:240442..240584;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000001.1	RefSeq	gene	240581	241093	.	-	.	ID=gene-RM680_RS01020;Name=RM680_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01020;old_locus_tag=RM680_01020
NZ_JAVRJI010000001.1	Protein Homology	CDS	240581	241093	.	-	0	ID=cds-WP_002440040.1;Parent=gene-RM680_RS01020;Dbxref=GenBank:WP_002440040.1;Name=WP_002440040.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446528.1;locus_tag=RM680_RS01020;product=shikimate kinase;protein_id=WP_002440040.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	241258	241749	.	-	.	ID=gene-RM680_RS01025;Name=RM680_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01025;old_locus_tag=RM680_01025
NZ_JAVRJI010000001.1	Protein Homology	CDS	241258	241749	.	-	0	ID=cds-WP_002440043.1;Parent=gene-RM680_RS01025;Dbxref=GenBank:WP_002440043.1;Name=WP_002440043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464661.1;locus_tag=RM680_RS01025;product=competence type IV pilus minor pilin ComGF;protein_id=WP_002440043.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	241673	241966	.	-	.	ID=gene-RM680_RS01030;Name=RM680_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01030;old_locus_tag=RM680_01030
NZ_JAVRJI010000001.1	Protein Homology	CDS	241673	241966	.	-	0	ID=cds-WP_001831116.1;Parent=gene-RM680_RS01030;Dbxref=GenBank:WP_001831116.1;Name=WP_001831116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831116.1;locus_tag=RM680_RS01030;product=hypothetical protein;protein_id=WP_001831116.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	241953	242390	.	-	.	ID=gene-RM680_RS01035;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=RM680_RS01035;old_locus_tag=RM680_01035
NZ_JAVRJI010000001.1	Protein Homology	CDS	241953	242390	.	-	0	ID=cds-WP_001831025.1;Parent=gene-RM680_RS01035;Dbxref=GenBank:WP_001831025.1;Name=WP_001831025.1;gbkey=CDS;gene=comGD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446531.1;locus_tag=RM680_RS01035;product=competence type IV pilus minor pilin ComGD;protein_id=WP_001831025.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	242380	242697	.	-	.	ID=gene-RM680_RS01040;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=RM680_RS01040;old_locus_tag=RM680_01040
NZ_JAVRJI010000001.1	Protein Homology	CDS	242380	242697	.	-	0	ID=cds-WP_001831271.1;Parent=gene-RM680_RS01040;Dbxref=GenBank:WP_001831271.1;Name=WP_001831271.1;Ontology_term=GO:0030420;gbkey=CDS;gene=comGC;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464660.1;locus_tag=RM680_RS01040;product=competence type IV pilus major pilin ComGC;protein_id=WP_001831271.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	242715	243782	.	-	.	ID=gene-RM680_RS01045;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=RM680_RS01045;old_locus_tag=RM680_01045
NZ_JAVRJI010000001.1	Protein Homology	CDS	242715	243782	.	-	0	ID=cds-WP_001831131.1;Parent=gene-RM680_RS01045;Dbxref=GenBank:WP_001831131.1;Name=WP_001831131.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831131.1;locus_tag=RM680_RS01045;product=competence type IV pilus assembly protein ComGB;protein_id=WP_001831131.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	243754	244728	.	-	.	ID=gene-RM680_RS01050;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=protein_coding;locus_tag=RM680_RS01050;old_locus_tag=RM680_01050
NZ_JAVRJI010000001.1	Protein Homology	CDS	243754	244728	.	-	0	ID=cds-WP_001831109.1;Parent=gene-RM680_RS01050;Dbxref=GenBank:WP_001831109.1;Name=WP_001831109.1;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464658.1;locus_tag=RM680_RS01050;product=competence type IV pilus ATPase ComGA;protein_id=WP_001831109.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	244785	245408	.	-	.	ID=gene-RM680_RS01055;Name=RM680_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01055;old_locus_tag=RM680_01055
NZ_JAVRJI010000001.1	Protein Homology	CDS	244785	245408	.	-	0	ID=cds-WP_001831016.1;Parent=gene-RM680_RS01055;Dbxref=GenBank:WP_001831016.1;Name=WP_001831016.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500156.1;locus_tag=RM680_RS01055;product=MBL fold metallo-hydrolase;protein_id=WP_001831016.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	245408	245734	.	-	.	ID=gene-RM680_RS01060;Name=RM680_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01060;old_locus_tag=RM680_01060
NZ_JAVRJI010000001.1	Protein Homology	CDS	245408	245734	.	-	0	ID=cds-WP_001831234.1;Parent=gene-RM680_RS01060;Dbxref=GenBank:WP_001831234.1;Name=WP_001831234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493575.1;locus_tag=RM680_RS01060;product=MTH1187 family thiamine-binding protein;protein_id=WP_001831234.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	245734	246720	.	-	.	ID=gene-RM680_RS01065;Name=RM680_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01065;old_locus_tag=RM680_01065
NZ_JAVRJI010000001.1	Protein Homology	CDS	245734	246720	.	-	0	ID=cds-WP_001831113.1;Parent=gene-RM680_RS01065;Dbxref=GenBank:WP_001831113.1;Name=WP_001831113.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500158.1;locus_tag=RM680_RS01065;product=ROK family glucokinase;protein_id=WP_001831113.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	246720	246920	.	-	.	ID=gene-RM680_RS01070;Name=RM680_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01070;old_locus_tag=RM680_01070
NZ_JAVRJI010000001.1	Protein Homology	CDS	246720	246920	.	-	0	ID=cds-WP_001831138.1;Parent=gene-RM680_RS01070;Dbxref=GenBank:WP_001831138.1;Name=WP_001831138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446537.1;locus_tag=RM680_RS01070;product=YqgQ family protein;protein_id=WP_001831138.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	246904	248364	.	-	.	ID=gene-RM680_RS01075;Name=RM680_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01075;old_locus_tag=RM680_01075
NZ_JAVRJI010000001.1	Protein Homology	CDS	246904	248364	.	-	0	ID=cds-WP_001832757.1;Parent=gene-RM680_RS01075;Dbxref=GenBank:WP_001832757.1;Name=WP_001832757.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832757.1;locus_tag=RM680_RS01075;product=rhomboid family protein;protein_id=WP_001832757.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	248365	248916	.	-	.	ID=gene-RM680_RS01080;Name=RM680_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01080;old_locus_tag=RM680_01080
NZ_JAVRJI010000001.1	Protein Homology	CDS	248365	248916	.	-	0	ID=cds-WP_001831001.1;Parent=gene-RM680_RS01080;Dbxref=GenBank:WP_001831001.1;Name=WP_001831001.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464657.1;locus_tag=RM680_RS01080;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_001831001.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	249099	249248	.	-	.	ID=gene-RM680_RS01085;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM680_RS01085;old_locus_tag=RM680_01085
NZ_JAVRJI010000001.1	Protein Homology	CDS	249099	249248	.	-	0	ID=cds-WP_001830957.1;Parent=gene-RM680_RS01085;Dbxref=GenBank:WP_001830957.1;Name=WP_001830957.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=RM680_RS01085;product=50S ribosomal protein L33;protein_id=WP_001830957.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	249353	251443	.	-	.	ID=gene-RM680_RS01090;Name=RM680_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01090;old_locus_tag=RM680_01090
NZ_JAVRJI010000001.1	Protein Homology	CDS	249353	251443	.	-	0	ID=cds-WP_002456490.1;Parent=gene-RM680_RS01090;Dbxref=GenBank:WP_002456490.1;Name=WP_002456490.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456490.1;locus_tag=RM680_RS01090;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_002456490.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	251844	252443	.	-	.	ID=gene-RM680_RS01095;Name=RM680_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01095;old_locus_tag=RM680_01095
NZ_JAVRJI010000001.1	Protein Homology	CDS	251844	252443	.	-	0	ID=cds-WP_001831217.1;Parent=gene-RM680_RS01095;Dbxref=GenBank:WP_001831217.1;Name=WP_001831217.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500165.1;locus_tag=RM680_RS01095;product=superoxide dismutase;protein_id=WP_001831217.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	252856	253275	.	-	.	ID=gene-RM680_RS01100;Name=RM680_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01100;old_locus_tag=RM680_01100
NZ_JAVRJI010000001.1	Protein Homology	CDS	252856	253275	.	-	0	ID=cds-WP_001831164.1;Parent=gene-RM680_RS01100;Dbxref=GenBank:WP_001831164.1;Name=WP_001831164.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831164.1;locus_tag=RM680_RS01100;product=Fur family transcriptional regulator;protein_id=WP_001831164.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	253278	254126	.	-	.	ID=gene-RM680_RS01105;Name=RM680_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01105;old_locus_tag=RM680_01105
NZ_JAVRJI010000001.1	Protein Homology	CDS	253278	254126	.	-	0	ID=cds-WP_001831102.1;Parent=gene-RM680_RS01105;Dbxref=GenBank:WP_001831102.1;Name=WP_001831102.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831102.1;locus_tag=RM680_RS01105;product=metal ABC transporter permease;protein_id=WP_001831102.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	pseudogene	254160	254958	.	-	.	ID=gene-RM680_RS01110;Name=RM680_RS01110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS01110;old_locus_tag=RM680_01110;pseudo=true
NZ_JAVRJI010000001.1	Protein Homology	CDS	254160	254958	.	-	0	ID=cds-RM680_RS01110;Parent=gene-RM680_RS01110;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500168.1;locus_tag=RM680_RS01110;product=metal ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	255160	256050	.	-	.	ID=gene-RM680_RS01115;Name=RM680_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01115;old_locus_tag=RM680_01115
NZ_JAVRJI010000001.1	Protein Homology	CDS	255160	256050	.	-	0	ID=cds-WP_002487664.1;Parent=gene-RM680_RS01115;Dbxref=GenBank:WP_002487664.1;Name=WP_002487664.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500169.1;locus_tag=RM680_RS01115;product=deoxyribonuclease IV;protein_id=WP_002487664.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	256060	257406	.	-	.	ID=gene-RM680_RS01120;Name=RM680_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01120;old_locus_tag=RM680_01120
NZ_JAVRJI010000001.1	Protein Homology	CDS	256060	257406	.	-	0	ID=cds-WP_001832762.1;Parent=gene-RM680_RS01120;Dbxref=GenBank:WP_001832762.1;Name=WP_001832762.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464655.1;locus_tag=RM680_RS01120;product=DEAD/DEAH box helicase;protein_id=WP_001832762.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	257441	258541	.	-	.	ID=gene-RM680_RS01125;Name=RM680_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01125;old_locus_tag=RM680_01125
NZ_JAVRJI010000001.1	Protein Homology	CDS	257441	258541	.	-	0	ID=cds-WP_001831093.1;Parent=gene-RM680_RS01125;Dbxref=GenBank:WP_001831093.1;Name=WP_001831093.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476844.1;locus_tag=RM680_RS01125;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_001831093.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	258531	259220	.	-	.	ID=gene-RM680_RS01130;Name=RM680_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01130;old_locus_tag=RM680_01130
NZ_JAVRJI010000001.1	Protein Homology	CDS	258531	259220	.	-	0	ID=cds-WP_001831175.1;Parent=gene-RM680_RS01130;Dbxref=GenBank:WP_001831175.1;Name=WP_001831175.1;Ontology_term=GO:0008033,GO:0032259,GO:0008757,GO:0160105,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine(22)-N1)-methyltransferase activity|0160105||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA processing|0008033||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446546.1;locus_tag=RM680_RS01130;product=tRNA (adenine(22)-N(1))-methyltransferase;protein_id=WP_001831175.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	259375	260481	.	-	.	ID=gene-RM680_RS01135;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=RM680_RS01135;old_locus_tag=RM680_01135
NZ_JAVRJI010000001.1	Protein Homology	CDS	259375	260481	.	-	0	ID=cds-WP_002440071.1;Parent=gene-RM680_RS01135;Dbxref=GenBank:WP_002440071.1;Name=WP_002440071.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275651.1;locus_tag=RM680_RS01135;product=RNA polymerase sigma factor RpoD;protein_id=WP_002440071.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	260752	262548	.	-	.	ID=gene-RM680_RS01140;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=RM680_RS01140;old_locus_tag=RM680_01140
NZ_JAVRJI010000001.1	Protein Homology	CDS	260752	262548	.	-	0	ID=cds-WP_001831005.1;Parent=gene-RM680_RS01140;Dbxref=GenBank:WP_001831005.1;Name=WP_001831005.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501017.1;locus_tag=RM680_RS01140;product=DNA primase;protein_id=WP_001831005.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	262722	263540	.	-	.	ID=gene-RM680_RS01145;Name=RM680_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01145;old_locus_tag=RM680_01145
NZ_JAVRJI010000001.1	Protein Homology	CDS	262722	263540	.	-	0	ID=cds-WP_002484844.1;Parent=gene-RM680_RS01145;Dbxref=GenBank:WP_002484844.1;Name=WP_002484844.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500175.1;locus_tag=RM680_RS01145;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_002484844.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	263552	264175	.	-	.	ID=gene-RM680_RS01150;Name=RM680_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01150;old_locus_tag=RM680_01150
NZ_JAVRJI010000001.1	Protein Homology	CDS	263552	264175	.	-	0	ID=cds-WP_010959185.1;Parent=gene-RM680_RS01150;Dbxref=GenBank:WP_010959185.1;Name=WP_010959185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001797828.1;locus_tag=RM680_RS01150;product=helix-turn-helix transcriptional regulator;protein_id=WP_010959185.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	264511	265902	.	+	.	ID=gene-RM680_RS01155;Name=RM680_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01155;old_locus_tag=RM680_01155
NZ_JAVRJI010000001.1	Protein Homology	CDS	264511	265902	.	+	0	ID=cds-WP_002456487.1;Parent=gene-RM680_RS01155;Dbxref=GenBank:WP_002456487.1;Name=WP_002456487.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500177.1;locus_tag=RM680_RS01155;product=glycine--tRNA ligase;protein_id=WP_002456487.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	266032	266793	.	-	.	ID=gene-RM680_RS01160;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=RM680_RS01160;old_locus_tag=RM680_01160
NZ_JAVRJI010000001.1	Protein Homology	CDS	266032	266793	.	-	0	ID=cds-WP_001830983.1;Parent=gene-RM680_RS01160;Dbxref=GenBank:WP_001830983.1;Name=WP_001830983.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496890.1;locus_tag=RM680_RS01160;product=DNA repair protein RecO;protein_id=WP_001830983.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	266819	267718	.	-	.	ID=gene-RM680_RS01165;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=RM680_RS01165;old_locus_tag=RM680_01165
NZ_JAVRJI010000001.1	Protein Homology	CDS	266819	267718	.	-	0	ID=cds-WP_001831081.1;Parent=gene-RM680_RS01165;Dbxref=GenBank:WP_001831081.1;Name=WP_001831081.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134760.1;locus_tag=RM680_RS01165;product=GTPase Era;protein_id=WP_001831081.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	267718	268122	.	-	.	ID=gene-RM680_RS01170;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=RM680_RS01170;old_locus_tag=RM680_01170
NZ_JAVRJI010000001.1	Protein Homology	CDS	267718	268122	.	-	0	ID=cds-WP_001830967.1;Parent=gene-RM680_RS01170;Dbxref=GenBank:WP_001830967.1;Name=WP_001830967.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270,GO:0005737;gbkey=CDS;gene=cdd;go_component=cytoplasm|0005737||IEA;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501020.1;locus_tag=RM680_RS01170;product=cytidine deaminase;protein_id=WP_001830967.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	268122	268478	.	-	.	ID=gene-RM680_RS01175;Name=RM680_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01175;old_locus_tag=RM680_01175
NZ_JAVRJI010000001.1	Protein Homology	CDS	268122	268478	.	-	0	ID=cds-WP_002440082.1;Parent=gene-RM680_RS01175;Dbxref=GenBank:WP_002440082.1;Name=WP_002440082.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524,GO:0016301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476850.1;locus_tag=RM680_RS01175;product=diacylglycerol kinase family protein;protein_id=WP_002440082.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	268480	268947	.	-	.	ID=gene-RM680_RS01180;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=RM680_RS01180;old_locus_tag=RM680_01180
NZ_JAVRJI010000001.1	Protein Homology	CDS	268480	268947	.	-	0	ID=cds-WP_001831142.1;Parent=gene-RM680_RS01180;Dbxref=GenBank:WP_001831142.1;Name=WP_001831142.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500183.1;locus_tag=RM680_RS01180;product=rRNA maturation RNase YbeY;protein_id=WP_001831142.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	268948	269895	.	-	.	ID=gene-RM680_RS01185;Name=RM680_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01185;old_locus_tag=RM680_01185
NZ_JAVRJI010000001.1	Protein Homology	CDS	268948	269895	.	-	0	ID=cds-WP_001831049.1;Parent=gene-RM680_RS01185;Dbxref=GenBank:WP_001831049.1;Name=WP_001831049.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831049.1;locus_tag=RM680_RS01185;product=PhoH family protein;protein_id=WP_001831049.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	270181	270864	.	-	.	ID=gene-RM680_RS01190;Name=RM680_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01190;old_locus_tag=RM680_01190
NZ_JAVRJI010000001.1	Protein Homology	CDS	270181	270864	.	-	0	ID=cds-WP_002456484.1;Parent=gene-RM680_RS01190;Dbxref=GenBank:WP_002456484.1;Name=WP_002456484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503175.1;locus_tag=RM680_RS01190;product=hypothetical protein;protein_id=WP_002456484.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	270880	271869	.	-	.	ID=gene-RM680_RS01195;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=RM680_RS01195;old_locus_tag=RM680_01195
NZ_JAVRJI010000001.1	Protein Homology	CDS	270880	271869	.	-	0	ID=cds-WP_001830989.1;Parent=gene-RM680_RS01195;Dbxref=GenBank:WP_001830989.1;Name=WP_001830989.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830989.1;locus_tag=RM680_RS01195;product=flotillin-like protein FloA;protein_id=WP_001830989.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	271884	272594	.	-	.	ID=gene-RM680_RS01200;Name=RM680_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01200;old_locus_tag=RM680_01200
NZ_JAVRJI010000001.1	Protein Homology	CDS	271884	272594	.	-	0	ID=cds-WP_001831053.1;Parent=gene-RM680_RS01200;Dbxref=GenBank:WP_001831053.1;Name=WP_001831053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369639.1;locus_tag=RM680_RS01200;product=NfeD family protein;protein_id=WP_001831053.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	273439	273615	.	-	.	ID=gene-RM680_RS01205;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=RM680_RS01205;old_locus_tag=RM680_01205
NZ_JAVRJI010000001.1	Protein Homology	CDS	273439	273615	.	-	0	ID=cds-WP_000048060.1;Parent=gene-RM680_RS01205;Dbxref=GenBank:WP_000048060.1;Name=WP_000048060.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998564.1;locus_tag=RM680_RS01205;product=30S ribosomal protein S21;protein_id=WP_000048060.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	273741	275087	.	-	.	ID=gene-RM680_RS01210;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=RM680_RS01210;old_locus_tag=RM680_01210
NZ_JAVRJI010000001.1	Protein Homology	CDS	273741	275087	.	-	0	ID=cds-WP_001831098.1;Parent=gene-RM680_RS01210;Dbxref=GenBank:WP_001831098.1;Name=WP_001831098.1;Ontology_term=GO:0006400,GO:0035598,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity|0035598||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500189.1;locus_tag=RM680_RS01210;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_001831098.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	275093	275845	.	-	.	ID=gene-RM680_RS01215;Name=RM680_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01215;old_locus_tag=RM680_01215
NZ_JAVRJI010000001.1	Protein Homology	CDS	275093	275845	.	-	0	ID=cds-WP_002456176.1;Parent=gene-RM680_RS01215;Dbxref=GenBank:WP_002456176.1;Name=WP_002456176.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493561.1;locus_tag=RM680_RS01215;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_002456176.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	275847	276785	.	-	.	ID=gene-RM680_RS01220;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=RM680_RS01220;old_locus_tag=RM680_01220
NZ_JAVRJI010000001.1	Protein Homology	CDS	275847	276785	.	-	0	ID=cds-WP_002440090.1;Parent=gene-RM680_RS01220;Dbxref=GenBank:WP_002440090.1;Name=WP_002440090.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831256.1;locus_tag=RM680_RS01220;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_002440090.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	276789	277910	.	-	.	ID=gene-RM680_RS01225;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=RM680_RS01225;old_locus_tag=RM680_01225
NZ_JAVRJI010000001.1	Protein Homology	CDS	276789	277910	.	-	0	ID=cds-WP_001830934.1;Parent=gene-RM680_RS01225;Dbxref=GenBank:WP_001830934.1;Name=WP_001830934.1;Ontology_term=GO:0006457,GO:0009408,GO:0005524,GO:0031072,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=ATP binding|0005524||IEA,heat shock protein binding|0031072||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500192.1;locus_tag=RM680_RS01225;product=molecular chaperone DnaJ;protein_id=WP_001830934.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	278055	279884	.	-	.	ID=gene-RM680_RS01230;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=RM680_RS01230;old_locus_tag=RM680_01230
NZ_JAVRJI010000001.1	Protein Homology	CDS	278055	279884	.	-	0	ID=cds-WP_001831007.1;Parent=gene-RM680_RS01230;Dbxref=GenBank:WP_001831007.1;Name=WP_001831007.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503178.1;locus_tag=RM680_RS01230;product=molecular chaperone DnaK;protein_id=WP_001831007.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	279940	280572	.	-	.	ID=gene-RM680_RS01235;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=RM680_RS01235;old_locus_tag=RM680_01235
NZ_JAVRJI010000001.1	Protein Homology	CDS	279940	280572	.	-	0	ID=cds-WP_001831117.1;Parent=gene-RM680_RS01235;Dbxref=GenBank:WP_001831117.1;Name=WP_001831117.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831117.1;locus_tag=RM680_RS01235;product=nucleotide exchange factor GrpE;protein_id=WP_001831117.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	280601	281578	.	-	.	ID=gene-RM680_RS01240;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=RM680_RS01240;old_locus_tag=RM680_01240
NZ_JAVRJI010000001.1	Protein Homology	CDS	280601	281578	.	-	0	ID=cds-WP_001831038.1;Parent=gene-RM680_RS01240;Dbxref=GenBank:WP_001831038.1;Name=WP_001831038.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457749.1;locus_tag=RM680_RS01240;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_001831038.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	281678	282802	.	-	.	ID=gene-RM680_RS01245;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=RM680_RS01245;old_locus_tag=RM680_01245
NZ_JAVRJI010000001.1	Protein Homology	CDS	281678	282802	.	-	0	ID=cds-WP_001831094.1;Parent=gene-RM680_RS01245;Dbxref=GenBank:WP_001831094.1;Name=WP_001831094.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470621.1;locus_tag=RM680_RS01245;product=radical SAM family heme chaperone HemW;protein_id=WP_001831094.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	282921	284744	.	-	.	ID=gene-RM680_RS01250;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=RM680_RS01250;old_locus_tag=RM680_01250
NZ_JAVRJI010000001.1	Protein Homology	CDS	282921	284744	.	-	0	ID=cds-WP_001831284.1;Parent=gene-RM680_RS01250;Dbxref=GenBank:WP_001831284.1;Name=WP_001831284.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002471033.1;locus_tag=RM680_RS01250;product=translation elongation factor 4;protein_id=WP_001831284.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	285037	285288	.	+	.	ID=gene-RM680_RS01255;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=RM680_RS01255;old_locus_tag=RM680_01255
NZ_JAVRJI010000001.1	Protein Homology	CDS	285037	285288	.	+	0	ID=cds-WP_001831221.1;Parent=gene-RM680_RS01255;Dbxref=GenBank:WP_001831221.1;Name=WP_001831221.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500199.1;locus_tag=RM680_RS01255;product=30S ribosomal protein S20;protein_id=WP_001831221.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	285406	286380	.	-	.	ID=gene-RM680_RS01260;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=RM680_RS01260;old_locus_tag=RM680_01260
NZ_JAVRJI010000001.1	Protein Homology	CDS	285406	286380	.	-	0	ID=cds-WP_001831125.1;Parent=gene-RM680_RS01260;Dbxref=GenBank:WP_001831125.1;Name=WP_001831125.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500200.1;locus_tag=RM680_RS01260;product=DNA polymerase III subunit delta;protein_id=WP_001831125.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	286425	288641	.	-	.	ID=gene-RM680_RS01265;Name=RM680_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01265;old_locus_tag=RM680_01265
NZ_JAVRJI010000001.1	Protein Homology	CDS	286425	288641	.	-	0	ID=cds-WP_002440101.1;Parent=gene-RM680_RS01265;Dbxref=GenBank:WP_002440101.1;Name=WP_002440101.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468789.1;locus_tag=RM680_RS01265;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_002440101.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	288645	289106	.	-	.	ID=gene-RM680_RS01270;Name=RM680_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01270;old_locus_tag=RM680_01270
NZ_JAVRJI010000001.1	Protein Homology	CDS	288645	289106	.	-	0	ID=cds-WP_002440103.1;Parent=gene-RM680_RS01270;Dbxref=GenBank:WP_002440103.1;Name=WP_002440103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446577.1;locus_tag=RM680_RS01270;product=ComE operon protein 2;protein_id=WP_002440103.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	289186	289860	.	-	.	ID=gene-RM680_RS01275;Name=RM680_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01275;old_locus_tag=RM680_01275
NZ_JAVRJI010000001.1	Protein Homology	CDS	289186	289860	.	-	0	ID=cds-WP_002440106.1;Parent=gene-RM680_RS01275;Dbxref=GenBank:WP_002440106.1;Name=WP_002440106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495043.1;locus_tag=RM680_RS01275;product=helix-hairpin-helix domain-containing protein;protein_id=WP_002440106.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	289919	290638	.	-	.	ID=gene-RM680_RS01280;Name=RM680_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01280;old_locus_tag=RM680_01280
NZ_JAVRJI010000001.1	Protein Homology	CDS	289919	290638	.	-	0	ID=cds-WP_020368151.1;Parent=gene-RM680_RS01280;Dbxref=GenBank:WP_020368151.1;Name=WP_020368151.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502368.1;locus_tag=RM680_RS01280;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_020368151.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	290641	290994	.	-	.	ID=gene-RM680_RS01285;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=RM680_RS01285;old_locus_tag=RM680_01285
NZ_JAVRJI010000001.1	Protein Homology	CDS	290641	290994	.	-	0	ID=cds-WP_001831075.1;Parent=gene-RM680_RS01285;Dbxref=GenBank:WP_001831075.1;Name=WP_001831075.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500205.1;locus_tag=RM680_RS01285;product=ribosome silencing factor;protein_id=WP_001831075.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	290995	291579	.	-	.	ID=gene-RM680_RS01290;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=RM680_RS01290;old_locus_tag=RM680_01290
NZ_JAVRJI010000001.1	Protein Homology	CDS	290995	291579	.	-	0	ID=cds-WP_001831144.1;Parent=gene-RM680_RS01290;Dbxref=GenBank:WP_001831144.1;Name=WP_001831144.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500206.1;locus_tag=RM680_RS01290;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WP_001831144.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	291566	292141	.	-	.	ID=gene-RM680_RS01295;Name=RM680_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01295;old_locus_tag=RM680_01295
NZ_JAVRJI010000001.1	Protein Homology	CDS	291566	292141	.	-	0	ID=cds-WP_001831250.1;Parent=gene-RM680_RS01295;Dbxref=GenBank:WP_001831250.1;Name=WP_001831250.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495045.1;locus_tag=RM680_RS01295;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_001831250.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	292138	292431	.	-	.	ID=gene-RM680_RS01300;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=RM680_RS01300;old_locus_tag=RM680_01300
NZ_JAVRJI010000001.1	Protein Homology	CDS	292138	292431	.	-	0	ID=cds-WP_001830956.1;Parent=gene-RM680_RS01300;Dbxref=GenBank:WP_001830956.1;Name=WP_001830956.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830956.1;locus_tag=RM680_RS01300;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_001830956.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	292431	293240	.	-	.	ID=gene-RM680_RS01305;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=RM680_RS01305;old_locus_tag=RM680_01305
NZ_JAVRJI010000001.1	Protein Homology	CDS	292431	293240	.	-	0	ID=cds-WP_001831091.1;Parent=gene-RM680_RS01305;Dbxref=GenBank:WP_001831091.1;Name=WP_001831091.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468439.1;locus_tag=RM680_RS01305;product=shikimate dehydrogenase;protein_id=WP_001831091.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	293256	294356	.	-	.	ID=gene-RM680_RS01310;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=RM680_RS01310;old_locus_tag=RM680_01310
NZ_JAVRJI010000001.1	Protein Homology	CDS	293256	294356	.	-	0	ID=cds-WP_001832784.1;Parent=gene-RM680_RS01310;Dbxref=GenBank:WP_001832784.1;Name=WP_001832784.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500210.1;locus_tag=RM680_RS01310;product=ribosome biogenesis GTPase YqeH;protein_id=WP_001832784.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	294357	294860	.	-	.	ID=gene-RM680_RS01315;Name=RM680_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01315;old_locus_tag=RM680_01315
NZ_JAVRJI010000001.1	Protein Homology	CDS	294357	294860	.	-	0	ID=cds-WP_153647389.1;Parent=gene-RM680_RS01315;Dbxref=GenBank:WP_153647389.1;Name=WP_153647389.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500211.1;locus_tag=RM680_RS01315;product=YqeG family HAD IIIA-type phosphatase;protein_id=WP_153647389.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	294904	295590	.	-	.	ID=gene-RM680_RS01320;Name=RM680_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01320;old_locus_tag=RM680_01320
NZ_JAVRJI010000001.1	Protein Homology	CDS	294904	295590	.	-	0	ID=cds-WP_001831322.1;Parent=gene-RM680_RS01320;Dbxref=GenBank:WP_001831322.1;Name=WP_001831322.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831322.1;locus_tag=RM680_RS01320;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_001831322.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	295789	297033	.	-	.	ID=gene-RM680_RS01325;Name=RM680_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01325;old_locus_tag=RM680_01325
NZ_JAVRJI010000001.1	Protein Homology	CDS	295789	297033	.	-	0	ID=cds-WP_002440121.1;Parent=gene-RM680_RS01325;Dbxref=GenBank:WP_002440121.1;Name=WP_002440121.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473567.1;locus_tag=RM680_RS01325;product=NRAMP family divalent metal transporter;protein_id=WP_002440121.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	297045	297797	.	-	.	ID=gene-RM680_RS01330;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=RM680_RS01330;old_locus_tag=RM680_01330
NZ_JAVRJI010000001.1	Protein Homology	CDS	297045	297797	.	-	0	ID=cds-WP_001830928.1;Parent=gene-RM680_RS01330;Dbxref=GenBank:WP_001830928.1;Name=WP_001830928.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275612.1;locus_tag=RM680_RS01330;product=5-oxoprolinase subunit PxpA;protein_id=WP_001830928.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	297800	299158	.	-	.	ID=gene-RM680_RS01335;Name=RM680_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01335;old_locus_tag=RM680_01335
NZ_JAVRJI010000001.1	Protein Homology	CDS	297800	299158	.	-	0	ID=cds-WP_002494471.1;Parent=gene-RM680_RS01335;Dbxref=GenBank:WP_002494471.1;Name=WP_002494471.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446591.1;locus_tag=RM680_RS01335;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002494471.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	299172	299612	.	-	.	ID=gene-RM680_RS01340;Name=RM680_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01340;old_locus_tag=RM680_01340
NZ_JAVRJI010000001.1	Protein Homology	CDS	299172	299612	.	-	0	ID=cds-WP_001832766.1;Parent=gene-RM680_RS01340;Dbxref=GenBank:WP_001832766.1;Name=WP_001832766.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473639.1;locus_tag=RM680_RS01340;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_001832766.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	299613	300617	.	-	.	ID=gene-RM680_RS01345;Name=RM680_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01345;old_locus_tag=RM680_01345
NZ_JAVRJI010000001.1	Protein Homology	CDS	299613	300617	.	-	0	ID=cds-WP_001832780.1;Parent=gene-RM680_RS01345;Dbxref=GenBank:WP_001832780.1;Name=WP_001832780.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475152.1;locus_tag=RM680_RS01345;product=5-oxoprolinase subunit C family protein;protein_id=WP_001832780.1;transl_table=11
NZ_JAVRJI010000001.1	RefSeq	gene	300607	301338	.	-	.	ID=gene-RM680_RS01350;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=RM680_RS01350;old_locus_tag=RM680_01350
NZ_JAVRJI010000001.1	Protein Homology	CDS	300607	301338	.	-	0	ID=cds-WP_001831296.1;Parent=gene-RM680_RS01350;Dbxref=GenBank:WP_001831296.1;Name=WP_001831296.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476870.1;locus_tag=RM680_RS01350;product=5-oxoprolinase subunit PxpB;protein_id=WP_001831296.1;transl_table=11
##sequence-region NZ_JAVRJI010000002.1 1 252629
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000002.1	RefSeq	region	1	252629	.	+	.	ID=NZ_JAVRJI010000002.1:1..252629;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000002.1	RefSeq	pseudogene	1	108	.	+	.	ID=gene-RM680_RS01355;Name=RM680_RS01355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS01355;old_locus_tag=RM680_01355;partial=true;pseudo=true;start_range=.,1
NZ_JAVRJI010000002.1	Protein Homology	CDS	1	108	.	+	0	ID=cds-RM680_RS01355;Parent=gene-RM680_RS01355;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501337.1;locus_tag=RM680_RS01355;partial=true;product=CHAP domain-containing protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	435	1595	.	+	.	ID=gene-RM680_RS01360;Name=RM680_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01360;old_locus_tag=RM680_01360
NZ_JAVRJI010000002.1	Protein Homology	CDS	435	1595	.	+	0	ID=cds-WP_001832328.1;Parent=gene-RM680_RS01360;Dbxref=GenBank:WP_001832328.1;Name=WP_001832328.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465124.1;locus_tag=RM680_RS01360;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_001832328.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	pseudogene	1608	2607	.	+	.	ID=gene-RM680_RS01365;Name=RM680_RS01365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS01365;old_locus_tag=RM680_01365;pseudo=true
NZ_JAVRJI010000002.1	Protein Homology	CDS	1608	2607	.	+	0	ID=cds-RM680_RS01365;Parent=gene-RM680_RS01365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959289.1;locus_tag=RM680_RS01365;product=D-lactate dehydrogenase;pseudo=true;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	2661	2867	.	-	.	ID=gene-RM680_RS01370;Name=copZ;gbkey=Gene;gene=copZ;gene_biotype=protein_coding;locus_tag=RM680_RS01370;old_locus_tag=RM680_01370
NZ_JAVRJI010000002.1	Protein Homology	CDS	2661	2867	.	-	0	ID=cds-WP_001832344.1;Parent=gene-RM680_RS01370;Dbxref=GenBank:WP_001832344.1;Name=WP_001832344.1;Ontology_term=GO:0005507;gbkey=CDS;gene=copZ;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832344.1;locus_tag=RM680_RS01370;product=copper chaperone CopZ;protein_id=WP_001832344.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	2999	5383	.	-	.	ID=gene-RM680_RS01375;Name=RM680_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01375;old_locus_tag=RM680_01375
NZ_JAVRJI010000002.1	Protein Homology	CDS	2999	5383	.	-	0	ID=cds-WP_002438084.1;Parent=gene-RM680_RS01375;Dbxref=GenBank:WP_002438084.1;Name=WP_002438084.1;Ontology_term=GO:0006812,GO:0005524,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470203.1;locus_tag=RM680_RS01375;product=heavy metal translocating P-type ATPase;protein_id=WP_002438084.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	5620	5826	.	-	.	ID=gene-RM680_RS01380;Name=RM680_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01380;old_locus_tag=RM680_01380
NZ_JAVRJI010000002.1	Protein Homology	CDS	5620	5826	.	-	0	ID=cds-WP_001832327.1;Parent=gene-RM680_RS01380;Dbxref=GenBank:WP_001832327.1;Name=WP_001832327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494521.1;locus_tag=RM680_RS01380;product=hypothetical protein;protein_id=WP_001832327.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	6029	6898	.	+	.	ID=gene-RM680_RS01385;Name=RM680_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01385;old_locus_tag=RM680_01385
NZ_JAVRJI010000002.1	Protein Homology	CDS	6029	6898	.	+	0	ID=cds-WP_001832349.1;Parent=gene-RM680_RS01385;Dbxref=GenBank:WP_001832349.1;Name=WP_001832349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465127.1;locus_tag=RM680_RS01385;product=SDR family oxidoreductase;protein_id=WP_001832349.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	7400	8944	.	+	.	ID=gene-RM680_RS01390;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=RM680_RS01390;old_locus_tag=RM680_01390
NZ_JAVRJI010000002.1	Protein Homology	CDS	7400	8944	.	+	0	ID=cds-WP_002438089.1;Parent=gene-RM680_RS01390;Dbxref=GenBank:WP_002438089.1;Name=WP_002438089.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA;go_process=L-proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274825.1;locus_tag=RM680_RS01390;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_002438089.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	9239	9466	.	+	.	ID=gene-RM680_RS01395;Name=RM680_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01395;old_locus_tag=RM680_01395
NZ_JAVRJI010000002.1	Protein Homology	CDS	9239	9466	.	+	0	ID=cds-WP_001832332.1;Parent=gene-RM680_RS01395;Dbxref=GenBank:WP_001832332.1;Name=WP_001832332.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447077.1;locus_tag=RM680_RS01395;product=FeoA family protein;protein_id=WP_001832332.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	9472	11466	.	+	.	ID=gene-RM680_RS01400;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=RM680_RS01400;old_locus_tag=RM680_01400
NZ_JAVRJI010000002.1	Protein Homology	CDS	9472	11466	.	+	0	ID=cds-WP_001832356.1;Parent=gene-RM680_RS01400;Dbxref=GenBank:WP_001832356.1;Name=WP_001832356.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467714.1;locus_tag=RM680_RS01400;product=ferrous iron transport protein B;protein_id=WP_001832356.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	11481	11663	.	+	.	ID=gene-RM680_RS01405;Name=RM680_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01405;old_locus_tag=RM680_01405
NZ_JAVRJI010000002.1	Protein Homology	CDS	11481	11663	.	+	0	ID=cds-WP_001832330.1;Parent=gene-RM680_RS01405;Dbxref=GenBank:WP_001832330.1;Name=WP_001832330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494520.1;locus_tag=RM680_RS01405;product=FeoB-associated Cys-rich membrane protein;protein_id=WP_001832330.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	11846	12310	.	+	.	ID=gene-RM680_RS01410;Name=RM680_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01410;old_locus_tag=RM680_01410
NZ_JAVRJI010000002.1	Protein Homology	CDS	11846	12310	.	+	0	ID=cds-WP_002456695.1;Parent=gene-RM680_RS01410;Dbxref=GenBank:WP_002456695.1;Name=WP_002456695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456695.1;locus_tag=RM680_RS01410;product=hypothetical protein;protein_id=WP_002456695.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	12615	13133	.	+	.	ID=gene-RM680_RS01415;Name=RM680_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01415;old_locus_tag=RM680_01415
NZ_JAVRJI010000002.1	Protein Homology	CDS	12615	13133	.	+	0	ID=cds-WP_002456694.1;Parent=gene-RM680_RS01415;Dbxref=GenBank:WP_002456694.1;Name=WP_002456694.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832355.1;locus_tag=RM680_RS01415;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_002456694.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	13384	14550	.	-	.	ID=gene-RM680_RS01420;Name=RM680_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01420;old_locus_tag=RM680_01420
NZ_JAVRJI010000002.1	Protein Homology	CDS	13384	14550	.	-	0	ID=cds-WP_002456031.1;Parent=gene-RM680_RS01420;Dbxref=GenBank:WP_002456031.1;Name=WP_002456031.1;Ontology_term=GO:0004421;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA synthase activity|0004421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501316.1;locus_tag=RM680_RS01420;product=hydroxymethylglutaryl-CoA synthase;protein_id=WP_002456031.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	14795	16072	.	+	.	ID=gene-RM680_RS01425;Name=RM680_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01425;old_locus_tag=RM680_01425
NZ_JAVRJI010000002.1	Protein Homology	CDS	14795	16072	.	+	0	ID=cds-WP_002438099.1;Parent=gene-RM680_RS01425;Dbxref=GenBank:WP_002438099.1;Name=WP_002438099.1;Ontology_term=GO:0015936,GO:0004420,GO:0016616;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA reductase (NADPH) activity|0004420||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=coenzyme A metabolic process|0015936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438099.1;locus_tag=RM680_RS01425;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=WP_002438099.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	16149	16580	.	-	.	ID=gene-RM680_RS01430;Name=RM680_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01430;old_locus_tag=RM680_01430
NZ_JAVRJI010000002.1	Protein Homology	CDS	16149	16580	.	-	0	ID=cds-WP_002438102.1;Parent=gene-RM680_RS01430;Dbxref=GenBank:WP_002438102.1;Name=WP_002438102.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500623.1;locus_tag=RM680_RS01430;product=CHAP domain-containing protein;protein_id=WP_002438102.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	16837	17052	.	-	.	ID=gene-RM680_RS01435;Name=RM680_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01435;old_locus_tag=RM680_01435
NZ_JAVRJI010000002.1	Protein Homology	CDS	16837	17052	.	-	0	ID=cds-WP_001832364.1;Parent=gene-RM680_RS01435;Dbxref=GenBank:WP_001832364.1;Name=WP_001832364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447085.1;locus_tag=RM680_RS01435;product=sterile alpha motif-like domain-containing protein;protein_id=WP_001832364.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	17240	18124	.	+	.	ID=gene-RM680_RS01440;Name=cidR;gbkey=Gene;gene=cidR;gene_biotype=protein_coding;locus_tag=RM680_RS01440;old_locus_tag=RM680_01440
NZ_JAVRJI010000002.1	Protein Homology	CDS	17240	18124	.	+	0	ID=cds-WP_001832366.1;Parent=gene-RM680_RS01440;Dbxref=GenBank:WP_001832366.1;Name=WP_001832366.1;gbkey=CDS;gene=cidR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477002.1;locus_tag=RM680_RS01440;product=cidABC operon transcriptional activator CidR;protein_id=WP_001832366.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	18436	18828	.	+	.	ID=gene-RM680_RS01445;Name=RM680_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01445;old_locus_tag=RM680_01445
NZ_JAVRJI010000002.1	Protein Homology	CDS	18436	18828	.	+	0	ID=cds-WP_001832353.1;Parent=gene-RM680_RS01445;Dbxref=GenBank:WP_001832353.1;Name=WP_001832353.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473310.1;locus_tag=RM680_RS01445;product=CidA/LrgA family protein;protein_id=WP_001832353.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	18825	19514	.	+	.	ID=gene-RM680_RS01450;Name=RM680_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01450;old_locus_tag=RM680_01450
NZ_JAVRJI010000002.1	Protein Homology	CDS	18825	19514	.	+	0	ID=cds-WP_001832367.1;Parent=gene-RM680_RS01450;Dbxref=GenBank:WP_001832367.1;Name=WP_001832367.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501307.1;locus_tag=RM680_RS01450;product=LrgB family protein;protein_id=WP_001832367.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	19564	21303	.	+	.	ID=gene-RM680_RS01455;Name=RM680_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01455;old_locus_tag=RM680_01455
NZ_JAVRJI010000002.1	Protein Homology	CDS	19564	21303	.	+	0	ID=cds-WP_001832342.1;Parent=gene-RM680_RS01455;Dbxref=GenBank:WP_001832342.1;Name=WP_001832342.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501306.1;locus_tag=RM680_RS01455;product=pyruvate oxidase;protein_id=WP_001832342.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	21547	23574	.	+	.	ID=gene-RM680_RS01460;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=RM680_RS01460;old_locus_tag=RM680_01460
NZ_JAVRJI010000002.1	Protein Homology	CDS	21547	23574	.	+	0	ID=cds-WP_002484492.1;Parent=gene-RM680_RS01460;Dbxref=GenBank:WP_002484492.1;Name=WP_002484492.1;Ontology_term=GO:1904659,GO:0055056,GO:0016020;gbkey=CDS;gene=ptsG;go_component=membrane|0016020||IEA;go_function=D-glucose transmembrane transporter activity|0055056||IEA;go_process=D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832339.1;locus_tag=RM680_RS01460;product=glucose-specific PTS transporter subunit IIBC;protein_id=WP_002484492.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	23922	24689	.	+	.	ID=gene-RM680_RS01465;Name=RM680_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01465;old_locus_tag=RM680_01465
NZ_JAVRJI010000002.1	Protein Homology	CDS	23922	24689	.	+	0	ID=cds-WP_002486307.1;Parent=gene-RM680_RS01465;Dbxref=GenBank:WP_002486307.1;Name=WP_002486307.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832343.1;locus_tag=RM680_RS01465;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_002486307.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	24754	25806	.	-	.	ID=gene-RM680_RS01470;Name=RM680_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01470;old_locus_tag=RM680_01470
NZ_JAVRJI010000002.1	Protein Homology	CDS	24754	25806	.	-	0	ID=cds-WP_002484496.1;Parent=gene-RM680_RS01470;Dbxref=GenBank:WP_002484496.1;Name=WP_002484496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464505.1;locus_tag=RM680_RS01470;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_002484496.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	26029	26355	.	+	.	ID=gene-RM680_RS01475;Name=RM680_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01475;old_locus_tag=RM680_01475
NZ_JAVRJI010000002.1	Protein Homology	CDS	26029	26355	.	+	0	ID=cds-WP_001832372.1;Parent=gene-RM680_RS01475;Dbxref=GenBank:WP_001832372.1;Name=WP_001832372.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832372.1;locus_tag=RM680_RS01475;product=thioredoxin family protein;protein_id=WP_001832372.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	26538	27386	.	+	.	ID=gene-RM680_RS01480;Name=RM680_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01480;old_locus_tag=RM680_01480
NZ_JAVRJI010000002.1	Protein Homology	CDS	26538	27386	.	+	0	ID=cds-WP_001832362.1;Parent=gene-RM680_RS01480;Dbxref=GenBank:WP_001832362.1;Name=WP_001832362.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486450.1;locus_tag=RM680_RS01480;product=YitT family protein;protein_id=WP_001832362.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	27469	28449	.	+	.	ID=gene-RM680_RS01485;Name=RM680_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01485;old_locus_tag=RM680_01485
NZ_JAVRJI010000002.1	Protein Homology	CDS	27469	28449	.	+	0	ID=cds-WP_001832376.1;Parent=gene-RM680_RS01485;Dbxref=GenBank:WP_001832376.1;Name=WP_001832376.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474789.1;locus_tag=RM680_RS01485;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_001832376.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	28521	28838	.	-	.	ID=gene-RM680_RS01490;Name=RM680_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01490;old_locus_tag=RM680_01490
NZ_JAVRJI010000002.1	Protein Homology	CDS	28521	28838	.	-	0	ID=cds-WP_001832368.1;Parent=gene-RM680_RS01490;Dbxref=GenBank:WP_001832368.1;Name=WP_001832368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491129.1;locus_tag=RM680_RS01490;product=hypothetical protein;protein_id=WP_001832368.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	29286	30443	.	+	.	ID=gene-RM680_RS01495;Name=pgsB;gbkey=Gene;gene=pgsB;gene_biotype=protein_coding;locus_tag=RM680_RS01495;old_locus_tag=RM680_01495
NZ_JAVRJI010000002.1	Protein Homology	CDS	29286	30443	.	+	0	ID=cds-WP_001832369.1;Parent=gene-RM680_RS01495;Dbxref=GenBank:WP_001832369.1;Name=WP_001832369.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsB;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501535.1;locus_tag=RM680_RS01495;product=poly-gamma-glutamate synthase PgsB;protein_id=WP_001832369.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	30445	30897	.	+	.	ID=gene-RM680_RS01500;Name=pgsC;gbkey=Gene;gene=pgsC;gene_biotype=protein_coding;locus_tag=RM680_RS01500;old_locus_tag=RM680_01500
NZ_JAVRJI010000002.1	Protein Homology	CDS	30445	30897	.	+	0	ID=cds-WP_001832320.1;Parent=gene-RM680_RS01500;Dbxref=GenBank:WP_001832320.1;Name=WP_001832320.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsC;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175061.1;locus_tag=RM680_RS01500;product=poly-gamma-glutamate biosynthesis protein PgsC;protein_id=WP_001832320.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	30921	31994	.	+	.	ID=gene-RM680_RS01505;Name=RM680_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01505;old_locus_tag=RM680_01505
NZ_JAVRJI010000002.1	Protein Homology	CDS	30921	31994	.	+	0	ID=cds-WP_001833104.1;Parent=gene-RM680_RS01505;Dbxref=GenBank:WP_001833104.1;Name=WP_001833104.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438121.1;locus_tag=RM680_RS01505;product=CapA family protein;protein_id=WP_001833104.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	31984	32145	.	+	.	ID=gene-RM680_RS01510;Name=RM680_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01510;old_locus_tag=RM680_01510
NZ_JAVRJI010000002.1	Protein Homology	CDS	31984	32145	.	+	0	ID=cds-WP_002495603.1;Parent=gene-RM680_RS01510;Dbxref=GenBank:WP_002495603.1;Name=WP_002495603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469060.1;locus_tag=RM680_RS01510;product=hypothetical protein;protein_id=WP_002495603.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	32148	33752	.	+	.	ID=gene-RM680_RS01515;Name=RM680_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01515;old_locus_tag=RM680_01515
NZ_JAVRJI010000002.1	Protein Homology	CDS	32148	33752	.	+	0	ID=cds-WP_001832324.1;Parent=gene-RM680_RS01515;Dbxref=GenBank:WP_001832324.1;Name=WP_001832324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438123.1;locus_tag=RM680_RS01515;product=gamma-glutamyltransferase;protein_id=WP_001832324.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	34008	34889	.	+	.	ID=gene-RM680_RS01520;Name=rbsU;gbkey=Gene;gene=rbsU;gene_biotype=protein_coding;locus_tag=RM680_RS01520;old_locus_tag=RM680_01520
NZ_JAVRJI010000002.1	Protein Homology	CDS	34008	34889	.	+	0	ID=cds-WP_001832371.1;Parent=gene-RM680_RS01520;Dbxref=GenBank:WP_001832371.1;Name=WP_001832371.1;Ontology_term=GO:0015752,GO:0015591;gbkey=CDS;gene=rbsU;go_function=D-ribose transmembrane transporter activity|0015591||IEA;go_process=D-ribose transmembrane transport|0015752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498836.1;locus_tag=RM680_RS01520;product=ribose/proton symporter RbsU;protein_id=WP_001832371.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	34911	35315	.	+	.	ID=gene-RM680_RS01525;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=RM680_RS01525;old_locus_tag=RM680_01525
NZ_JAVRJI010000002.1	Protein Homology	CDS	34911	35315	.	+	0	ID=cds-WP_001832333.1;Parent=gene-RM680_RS01525;Dbxref=GenBank:WP_001832333.1;Name=WP_001832333.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498835.1;locus_tag=RM680_RS01525;product=D-ribose pyranase;protein_id=WP_001832333.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	35369	36292	.	+	.	ID=gene-RM680_RS01530;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=RM680_RS01530;old_locus_tag=RM680_01530
NZ_JAVRJI010000002.1	Protein Homology	CDS	35369	36292	.	+	0	ID=cds-WP_002470202.1;Parent=gene-RM680_RS01530;Dbxref=GenBank:WP_002470202.1;Name=WP_002470202.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503202.1;locus_tag=RM680_RS01530;product=ribokinase;protein_id=WP_002470202.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	36583	38073	.	+	.	ID=gene-RM680_RS01535;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=RM680_RS01535;old_locus_tag=RM680_01535
NZ_JAVRJI010000002.1	Protein Homology	CDS	36583	38073	.	+	0	ID=cds-WP_001832357.1;Parent=gene-RM680_RS01535;Dbxref=GenBank:WP_001832357.1;Name=WP_001832357.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362950.1;locus_tag=RM680_RS01535;product=xylulokinase;protein_id=WP_001832357.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	38348	39133	.	+	.	ID=gene-RM680_RS01540;Name=RM680_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01540;old_locus_tag=RM680_01540
NZ_JAVRJI010000002.1	Protein Homology	CDS	38348	39133	.	+	0	ID=cds-WP_001832336.1;Parent=gene-RM680_RS01540;Dbxref=GenBank:WP_001832336.1;Name=WP_001832336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505816.1;locus_tag=RM680_RS01540;product=hypothetical protein;protein_id=WP_001832336.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	39786	40829	.	+	.	ID=gene-RM680_RS01545;Name=RM680_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01545;old_locus_tag=RM680_01545
NZ_JAVRJI010000002.1	Protein Homology	CDS	39786	40829	.	+	0	ID=cds-WP_001832326.1;Parent=gene-RM680_RS01545;Dbxref=GenBank:WP_001832326.1;Name=WP_001832326.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503912.1;locus_tag=RM680_RS01545;product=PTS sugar transporter subunit IIC;protein_id=WP_001832326.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	40832	41512	.	+	.	ID=gene-RM680_RS01550;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=RM680_RS01550;old_locus_tag=RM680_01550
NZ_JAVRJI010000002.1	Protein Homology	CDS	40832	41512	.	+	0	ID=cds-WP_002493287.1;Parent=gene-RM680_RS01550;Dbxref=GenBank:WP_002493287.1;Name=WP_002493287.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458212.1;locus_tag=RM680_RS01550;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;protein_id=WP_002493287.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	41525	42424	.	+	.	ID=gene-RM680_RS01555;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=RM680_RS01555;old_locus_tag=RM680_01555
NZ_JAVRJI010000002.1	Protein Homology	CDS	41525	42424	.	+	0	ID=cds-WP_001832363.1;Parent=gene-RM680_RS01555;Dbxref=GenBank:WP_001832363.1;Name=WP_001832363.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364689.1;locus_tag=RM680_RS01555;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_001832363.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	42656	42811	.	-	.	ID=gene-RM680_RS01560;Name=RM680_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01560;old_locus_tag=RM680_01560
NZ_JAVRJI010000002.1	GeneMarkS-2+	CDS	42656	42811	.	-	0	ID=cds-WP_002468259.1;Parent=gene-RM680_RS01560;Dbxref=GenBank:WP_002468259.1;Name=WP_002468259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS01560;product=hypothetical protein;protein_id=WP_002468259.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	43137	43313	.	+	.	ID=gene-RM680_RS01565;Name=RM680_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01565;old_locus_tag=RM680_01565
NZ_JAVRJI010000002.1	Protein Homology	CDS	43137	43313	.	+	0	ID=cds-WP_002438139.1;Parent=gene-RM680_RS01565;Dbxref=GenBank:WP_002438139.1;Name=WP_002438139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447106.1;locus_tag=RM680_RS01565;product=hypothetical protein;protein_id=WP_002438139.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	43377	43871	.	-	.	ID=gene-RM680_RS01570;Name=RM680_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01570;old_locus_tag=RM680_01570
NZ_JAVRJI010000002.1	Protein Homology	CDS	43377	43871	.	-	0	ID=cds-WP_002438140.1;Parent=gene-RM680_RS01570;Dbxref=GenBank:WP_002438140.1;Name=WP_002438140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363264.1;locus_tag=RM680_RS01570;product=GNAT family N-acetyltransferase;protein_id=WP_002438140.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	44047	44658	.	+	.	ID=gene-RM680_RS01575;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=RM680_RS01575;old_locus_tag=RM680_01575
NZ_JAVRJI010000002.1	Protein Homology	CDS	44047	44658	.	+	0	ID=cds-WP_001831599.1;Parent=gene-RM680_RS01575;Dbxref=GenBank:WP_001831599.1;Name=WP_001831599.1;gbkey=CDS;gene=srtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438141.1;locus_tag=RM680_RS01575;product=class A sortase SrtA;protein_id=WP_001831599.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	45003	45812	.	+	.	ID=gene-RM680_RS01580;Name=RM680_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01580;old_locus_tag=RM680_01580
NZ_JAVRJI010000002.1	Protein Homology	CDS	45003	45812	.	+	0	ID=cds-WP_002438142.1;Parent=gene-RM680_RS01580;Dbxref=GenBank:WP_002438142.1;Name=WP_002438142.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831422.1;locus_tag=RM680_RS01580;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_002438142.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	45999	46991	.	-	.	ID=gene-RM680_RS01585;Name=RM680_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01585;old_locus_tag=RM680_01585
NZ_JAVRJI010000002.1	Protein Homology	CDS	45999	46991	.	-	0	ID=cds-WP_311563494.1;Parent=gene-RM680_RS01585;Dbxref=GenBank:WP_311563494.1;Name=WP_311563494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456690.1;locus_tag=RM680_RS01585;product=D-lactate dehydrogenase;protein_id=WP_311563494.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	47238	47900	.	+	.	ID=gene-RM680_RS01590;Name=RM680_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01590;old_locus_tag=RM680_01590
NZ_JAVRJI010000002.1	Protein Homology	CDS	47238	47900	.	+	0	ID=cds-WP_002468280.1;Parent=gene-RM680_RS01590;Dbxref=GenBank:WP_002468280.1;Name=WP_002468280.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505538.1;locus_tag=RM680_RS01590;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_002468280.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	48278	49771	.	+	.	ID=gene-RM680_RS01595;Name=RM680_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01595;old_locus_tag=RM680_01595
NZ_JAVRJI010000002.1	Protein Homology	CDS	48278	49771	.	+	0	ID=cds-WP_311563495.1;Parent=gene-RM680_RS01595;Dbxref=GenBank:WP_311563495.1;Name=WP_311563495.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501529.1;locus_tag=RM680_RS01595;product=aldehyde dehydrogenase family protein;protein_id=WP_311563495.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	pseudogene	49972	50274	.	+	.	ID=gene-RM680_RS01600;Name=RM680_RS01600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS01600;old_locus_tag=RM680_01600;pseudo=true
NZ_JAVRJI010000002.1	Protein Homology	CDS	49972	50274	.	+	0	ID=cds-RM680_RS01600;Parent=gene-RM680_RS01600;Note=internal stop;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458205.1;locus_tag=RM680_RS01600;product=TM2 domain-containing protein;pseudo=true;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	50600	51397	.	-	.	ID=gene-RM680_RS01605;Name=RM680_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01605;old_locus_tag=RM680_01605
NZ_JAVRJI010000002.1	Protein Homology	CDS	50600	51397	.	-	0	ID=cds-WP_002456687.1;Parent=gene-RM680_RS01605;Dbxref=GenBank:WP_002456687.1;Name=WP_002456687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834593.1;locus_tag=RM680_RS01605;product=VOC family protein;protein_id=WP_002456687.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	51659	51940	.	-	.	ID=gene-RM680_RS01610;Name=RM680_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01610;old_locus_tag=RM680_01610
NZ_JAVRJI010000002.1	Protein Homology	CDS	51659	51940	.	-	0	ID=cds-WP_001831535.1;Parent=gene-RM680_RS01610;Dbxref=GenBank:WP_001831535.1;Name=WP_001831535.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360598.1;locus_tag=RM680_RS01610;product=GNAT family N-acetyltransferase;protein_id=WP_001831535.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	52107	53054	.	+	.	ID=gene-RM680_RS01615;Name=RM680_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01615;old_locus_tag=RM680_01615
NZ_JAVRJI010000002.1	Protein Homology	CDS	52107	53054	.	+	0	ID=cds-WP_002468270.1;Parent=gene-RM680_RS01615;Dbxref=GenBank:WP_002468270.1;Name=WP_002468270.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489507.1;locus_tag=RM680_RS01615;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=WP_002468270.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	53125	54549	.	-	.	ID=gene-RM680_RS01620;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=RM680_RS01620;old_locus_tag=RM680_01620
NZ_JAVRJI010000002.1	Protein Homology	CDS	53125	54549	.	-	0	ID=cds-WP_002470182.1;Parent=gene-RM680_RS01620;Dbxref=GenBank:WP_002470182.1;Name=WP_002470182.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484955.1;locus_tag=RM680_RS01620;product=aldehyde dehydrogenase;protein_id=WP_002470182.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	54798	55847	.	-	.	ID=gene-RM680_RS01625;Name=RM680_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01625;old_locus_tag=RM680_01625
NZ_JAVRJI010000002.1	Protein Homology	CDS	54798	55847	.	-	0	ID=cds-WP_002456684.1;Parent=gene-RM680_RS01625;Dbxref=GenBank:WP_002456684.1;Name=WP_002456684.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491025.1;locus_tag=RM680_RS01625;product=YkvI family membrane protein;protein_id=WP_002456684.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	56195	57982	.	+	.	ID=gene-RM680_RS01630;Name=RM680_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01630;old_locus_tag=RM680_01630
NZ_JAVRJI010000002.1	Protein Homology	CDS	56195	57982	.	+	0	ID=cds-WP_002456683.1;Parent=gene-RM680_RS01630;Dbxref=GenBank:WP_002456683.1;Name=WP_002456683.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456683.1;locus_tag=RM680_RS01630;product=cation:proton antiporter;protein_id=WP_002456683.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	58211	60175	.	-	.	ID=gene-RM680_RS01635;Name=RM680_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01635;old_locus_tag=RM680_01635
NZ_JAVRJI010000002.1	Protein Homology	CDS	58211	60175	.	-	0	ID=cds-WP_002438166.1;Parent=gene-RM680_RS01635;Dbxref=GenBank:WP_002438166.1;Name=WP_002438166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498462.1;locus_tag=RM680_RS01635;product=fructose-1%2C6-bisphosphatase;protein_id=WP_002438166.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	60349	60963	.	-	.	ID=gene-RM680_RS01640;Name=RM680_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01640;old_locus_tag=RM680_01640
NZ_JAVRJI010000002.1	Protein Homology	CDS	60349	60963	.	-	0	ID=cds-WP_001831584.1;Parent=gene-RM680_RS01640;Dbxref=GenBank:WP_001831584.1;Name=WP_001831584.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464518.1;locus_tag=RM680_RS01640;product=DedA family protein;protein_id=WP_001831584.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	61071	62069	.	-	.	ID=gene-RM680_RS01645;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=RM680_RS01645;old_locus_tag=RM680_01645
NZ_JAVRJI010000002.1	Protein Homology	CDS	61071	62069	.	-	0	ID=cds-WP_001831616.1;Parent=gene-RM680_RS01645;Dbxref=GenBank:WP_001831616.1;Name=WP_001831616.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502579.1;locus_tag=RM680_RS01645;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_001831616.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	62071	62838	.	-	.	ID=gene-RM680_RS01650;Name=RM680_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01650;old_locus_tag=RM680_01650
NZ_JAVRJI010000002.1	Protein Homology	CDS	62071	62838	.	-	0	ID=cds-WP_001831506.1;Parent=gene-RM680_RS01650;Dbxref=GenBank:WP_001831506.1;Name=WP_001831506.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901320.1;locus_tag=RM680_RS01650;product=thiazole synthase;protein_id=WP_001831506.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	62840	63040	.	-	.	ID=gene-RM680_RS01655;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=RM680_RS01655;old_locus_tag=RM680_01655
NZ_JAVRJI010000002.1	Protein Homology	CDS	62840	63040	.	-	0	ID=cds-WP_001831588.1;Parent=gene-RM680_RS01655;Dbxref=GenBank:WP_001831588.1;Name=WP_001831588.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464520.1;locus_tag=RM680_RS01655;product=sulfur carrier protein ThiS;protein_id=WP_001831588.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	63024	64142	.	-	.	ID=gene-RM680_RS01660;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=RM680_RS01660;old_locus_tag=RM680_01660
NZ_JAVRJI010000002.1	Protein Homology	CDS	63024	64142	.	-	0	ID=cds-WP_002456682.1;Parent=gene-RM680_RS01660;Dbxref=GenBank:WP_002456682.1;Name=WP_002456682.1;Ontology_term=GO:0016647,GO:0050660;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502578.1;locus_tag=RM680_RS01660;product=glycine oxidase ThiO;protein_id=WP_002456682.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	64135	64734	.	-	.	ID=gene-RM680_RS01665;Name=RM680_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01665;old_locus_tag=RM680_01665
NZ_JAVRJI010000002.1	Protein Homology	CDS	64135	64734	.	-	0	ID=cds-WP_139062377.1;Parent=gene-RM680_RS01665;Dbxref=GenBank:WP_139062377.1;Name=WP_139062377.1;Ontology_term=GO:0009228,GO:0009229,GO:0000287,GO:0004789;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA,thiamine diphosphate biosynthetic process|0009229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503351.1;locus_tag=RM680_RS01665;product=thiamine phosphate synthase;protein_id=WP_139062377.1;transl_table=11
NZ_JAVRJI010000002.1	cmsearch	riboswitch	64804	64913	.	-	.	ID=id-NZ_JAVRJI010000002.1:64804..64913;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000002.1	RefSeq	gene	65406	66680	.	+	.	ID=gene-RM680_RS01670;Name=RM680_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01670;old_locus_tag=RM680_01670
NZ_JAVRJI010000002.1	Protein Homology	CDS	65406	66680	.	+	0	ID=cds-WP_002438175.1;Parent=gene-RM680_RS01670;Dbxref=GenBank:WP_002438175.1;Name=WP_002438175.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501521.1;locus_tag=RM680_RS01670;product=MFS transporter;protein_id=WP_002438175.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	66833	67123	.	+	.	ID=gene-RM680_RS01675;Name=RM680_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01675;old_locus_tag=RM680_01675
NZ_JAVRJI010000002.1	Protein Homology	CDS	66833	67123	.	+	0	ID=cds-WP_002438178.1;Parent=gene-RM680_RS01675;Dbxref=GenBank:WP_002438178.1;Name=WP_002438178.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438178.1;locus_tag=RM680_RS01675;product=putative quinol monooxygenase;protein_id=WP_002438178.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	67285	69201	.	+	.	ID=gene-RM680_RS01680;Name=RM680_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01680;old_locus_tag=RM680_01680
NZ_JAVRJI010000002.1	Protein Homology	CDS	67285	69201	.	+	0	ID=cds-WP_002469551.1;Parent=gene-RM680_RS01680;Dbxref=GenBank:WP_002469551.1;Name=WP_002469551.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505410.1;locus_tag=RM680_RS01680;product=FUSC family protein;protein_id=WP_002469551.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	69275	69688	.	+	.	ID=gene-RM680_RS01685;Name=RM680_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01685;old_locus_tag=RM680_01685
NZ_JAVRJI010000002.1	Protein Homology	CDS	69275	69688	.	+	0	ID=cds-WP_002447130.1;Parent=gene-RM680_RS01685;Dbxref=GenBank:WP_002447130.1;Name=WP_002447130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447130.1;locus_tag=RM680_RS01685;product=DUF2188 domain-containing protein;protein_id=WP_002447130.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	69952	70653	.	+	.	ID=gene-RM680_RS01690;Name=RM680_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01690;old_locus_tag=RM680_01690
NZ_JAVRJI010000002.1	Protein Homology	CDS	69952	70653	.	+	0	ID=cds-WP_002438184.1;Parent=gene-RM680_RS01690;Dbxref=GenBank:WP_002438184.1;Name=WP_002438184.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458189.1;locus_tag=RM680_RS01690;product=GTP pyrophosphokinase;protein_id=WP_002438184.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	70767	71690	.	-	.	ID=gene-RM680_RS01695;Name=RM680_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01695;old_locus_tag=RM680_01695
NZ_JAVRJI010000002.1	Protein Homology	CDS	70767	71690	.	-	0	ID=cds-WP_002470183.1;Parent=gene-RM680_RS01695;Dbxref=GenBank:WP_002470183.1;Name=WP_002470183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477033.1;locus_tag=RM680_RS01695;product=phosphatase PAP2 family protein;protein_id=WP_002470183.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	71996	72871	.	+	.	ID=gene-RM680_RS01700;Name=RM680_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01700;old_locus_tag=RM680_01700
NZ_JAVRJI010000002.1	Protein Homology	CDS	71996	72871	.	+	0	ID=cds-WP_002469560.1;Parent=gene-RM680_RS01700;Dbxref=GenBank:WP_002469560.1;Name=WP_002469560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495957.1;locus_tag=RM680_RS01700;product=alpha/beta fold hydrolase;protein_id=WP_002469560.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	72957	73673	.	+	.	ID=gene-RM680_RS01705;Name=RM680_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01705;old_locus_tag=RM680_01705
NZ_JAVRJI010000002.1	Protein Homology	CDS	72957	73673	.	+	0	ID=cds-WP_002469552.1;Parent=gene-RM680_RS01705;Dbxref=GenBank:WP_002469552.1;Name=WP_002469552.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502576.1;locus_tag=RM680_RS01705;product=MerR family transcriptional regulator;protein_id=WP_002469552.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	73831	75189	.	-	.	ID=gene-RM680_RS01710;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=RM680_RS01710;old_locus_tag=RM680_01710
NZ_JAVRJI010000002.1	Protein Homology	CDS	73831	75189	.	-	0	ID=cds-WP_002456677.1;Parent=gene-RM680_RS01710;Dbxref=GenBank:WP_002456677.1;Name=WP_002456677.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505810.1;locus_tag=RM680_RS01710;product=glycerol-3-phosphate transporter;protein_id=WP_002456677.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	75556	76236	.	+	.	ID=gene-RM680_RS01715;Name=RM680_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01715;old_locus_tag=RM680_01715
NZ_JAVRJI010000002.1	Protein Homology	CDS	75556	76236	.	+	0	ID=cds-WP_002456676.1;Parent=gene-RM680_RS01715;Dbxref=GenBank:WP_002456676.1;Name=WP_002456676.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486425.1;locus_tag=RM680_RS01715;product=GntR family transcriptional regulator;protein_id=WP_002456676.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	76260	77801	.	+	.	ID=gene-RM680_RS01720;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=RM680_RS01720;old_locus_tag=RM680_01720
NZ_JAVRJI010000002.1	Protein Homology	CDS	76260	77801	.	+	0	ID=cds-WP_002438195.1;Parent=gene-RM680_RS01720;Dbxref=GenBank:WP_002438195.1;Name=WP_002438195.1;Ontology_term=GO:0009255,GO:0019521,GO:0046316;gbkey=CDS;gene=gntK;go_function=gluconokinase activity|0046316||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA,D-gluconate metabolic process|0019521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959279.1;locus_tag=RM680_RS01720;product=gluconokinase;protein_id=WP_002438195.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	77851	79209	.	+	.	ID=gene-RM680_RS01725;Name=RM680_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01725;old_locus_tag=RM680_01725
NZ_JAVRJI010000002.1	Protein Homology	CDS	77851	79209	.	+	0	ID=cds-WP_002456675.1;Parent=gene-RM680_RS01725;Dbxref=GenBank:WP_002456675.1;Name=WP_002456675.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501265.1;locus_tag=RM680_RS01725;product=gluconate:H+ symporter;protein_id=WP_002456675.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	79457	80323	.	+	.	ID=gene-RM680_RS01730;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=RM680_RS01730;old_locus_tag=RM680_01730
NZ_JAVRJI010000002.1	Protein Homology	CDS	79457	80323	.	+	0	ID=cds-WP_002456674.1;Parent=gene-RM680_RS01730;Dbxref=GenBank:WP_002456674.1;Name=WP_002456674.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831553.1;locus_tag=RM680_RS01730;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_002456674.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	80537	82177	.	-	.	ID=gene-RM680_RS01735;Name=RM680_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01735;old_locus_tag=RM680_01735
NZ_JAVRJI010000002.1	Protein Homology	CDS	80537	82177	.	-	0	ID=cds-WP_002456673.1;Parent=gene-RM680_RS01735;Dbxref=GenBank:WP_002456673.1;Name=WP_002456673.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113887.1;locus_tag=RM680_RS01735;product=phospho-sugar mutase;protein_id=WP_002456673.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	82395	83885	.	+	.	ID=gene-RM680_RS01740;Name=RM680_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01740;old_locus_tag=RM680_01740
NZ_JAVRJI010000002.1	Protein Homology	CDS	82395	83885	.	+	0	ID=cds-WP_002469545.1;Parent=gene-RM680_RS01740;Dbxref=GenBank:WP_002469545.1;Name=WP_002469545.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493294.1;locus_tag=RM680_RS01740;product=glycosyltransferase;protein_id=WP_002469545.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	84159	84551	.	+	.	ID=gene-RM680_RS01745;Name=RM680_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01745;old_locus_tag=RM680_01745
NZ_JAVRJI010000002.1	Protein Homology	CDS	84159	84551	.	+	0	ID=cds-WP_002469548.1;Parent=gene-RM680_RS01745;Dbxref=GenBank:WP_002469548.1;Name=WP_002469548.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470196.1;locus_tag=RM680_RS01745;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002469548.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	84553	87411	.	+	.	ID=gene-RM680_RS01750;Name=RM680_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01750;old_locus_tag=RM680_01750
NZ_JAVRJI010000002.1	Protein Homology	CDS	84553	87411	.	+	0	ID=cds-WP_002469554.1;Parent=gene-RM680_RS01750;Dbxref=GenBank:WP_002469554.1;Name=WP_002469554.1;Ontology_term=GO:0003676,GO:0004386,GO:0004630,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,phospholipase D activity|0004630||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470135.1;locus_tag=RM680_RS01750;product=DUF3427 domain-containing protein;protein_id=WP_002469554.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	87562	87753	.	+	.	ID=gene-RM680_RS01755;Name=RM680_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01755;old_locus_tag=RM680_01755
NZ_JAVRJI010000002.1	Protein Homology	CDS	87562	87753	.	+	0	ID=cds-WP_001831457.1;Parent=gene-RM680_RS01755;Dbxref=GenBank:WP_001831457.1;Name=WP_001831457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501241.1;locus_tag=RM680_RS01755;product=hypothetical protein;protein_id=WP_001831457.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	pseudogene	88035	88334	.	-	.	ID=gene-RM680_RS01760;Name=RM680_RS01760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS01760;old_locus_tag=RM680_01760;pseudo=true
NZ_JAVRJI010000002.1	Protein Homology	CDS	88035	88334	.	-	0	ID=cds-RM680_RS01760;Parent=gene-RM680_RS01760;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458177.1;locus_tag=RM680_RS01760;product=DUF1413 domain-containing protein;pseudo=true;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	88523	89215	.	+	.	ID=gene-RM680_RS01765;Name=RM680_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01765;old_locus_tag=RM680_01765
NZ_JAVRJI010000002.1	Protein Homology	CDS	88523	89215	.	+	0	ID=cds-WP_002456667.1;Parent=gene-RM680_RS01765;Dbxref=GenBank:WP_002456667.1;Name=WP_002456667.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499073.1;locus_tag=RM680_RS01765;product=SDR family oxidoreductase;protein_id=WP_002456667.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	89304	90557	.	+	.	ID=gene-RM680_RS01770;Name=RM680_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01770;old_locus_tag=RM680_01770
NZ_JAVRJI010000002.1	Protein Homology	CDS	89304	90557	.	+	0	ID=cds-WP_080009559.1;Parent=gene-RM680_RS01770;Dbxref=GenBank:WP_080009559.1;Name=WP_080009559.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438217.1;locus_tag=RM680_RS01770;product=acetylornithine deacetylase;protein_id=WP_080009559.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	90727	92892	.	-	.	ID=gene-RM680_RS01775;Name=RM680_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01775;old_locus_tag=RM680_01775
NZ_JAVRJI010000002.1	Protein Homology	CDS	90727	92892	.	-	0	ID=cds-WP_002470194.1;Parent=gene-RM680_RS01775;Dbxref=GenBank:WP_002470194.1;Name=WP_002470194.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274912.1;locus_tag=RM680_RS01775;product=RNA degradosome polyphosphate kinase;protein_id=WP_002470194.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	92955	94487	.	-	.	ID=gene-RM680_RS01780;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=RM680_RS01780;old_locus_tag=RM680_01780
NZ_JAVRJI010000002.1	Protein Homology	CDS	92955	94487	.	-	0	ID=cds-WP_104992902.1;Parent=gene-RM680_RS01780;Dbxref=GenBank:WP_104992902.1;Name=WP_104992902.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361298.1;locus_tag=RM680_RS01780;product=exopolyphosphatase;protein_id=WP_104992902.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	94801	95619	.	+	.	ID=gene-RM680_RS01785;Name=RM680_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01785;old_locus_tag=RM680_01785
NZ_JAVRJI010000002.1	Protein Homology	CDS	94801	95619	.	+	0	ID=cds-WP_001831606.1;Parent=gene-RM680_RS01785;Dbxref=GenBank:WP_001831606.1;Name=WP_001831606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503368.1;locus_tag=RM680_RS01785;product=SDR family oxidoreductase;protein_id=WP_001831606.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	95782	95970	.	-	.	ID=gene-RM680_RS01790;Name=RM680_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01790;old_locus_tag=RM680_01790
NZ_JAVRJI010000002.1	Protein Homology	CDS	95782	95970	.	-	0	ID=cds-WP_002438227.1;Parent=gene-RM680_RS01790;Dbxref=GenBank:WP_002438227.1;Name=WP_002438227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505409.1;locus_tag=RM680_RS01790;product=hypothetical protein;protein_id=WP_002438227.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	95987	97063	.	-	.	ID=gene-RM680_RS01795;Name=RM680_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01795;old_locus_tag=RM680_01795
NZ_JAVRJI010000002.1	Protein Homology	CDS	95987	97063	.	-	0	ID=cds-WP_104992901.1;Parent=gene-RM680_RS01795;Dbxref=GenBank:WP_104992901.1;Name=WP_104992901.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501214.1;locus_tag=RM680_RS01795;product=M42 family metallopeptidase;protein_id=WP_104992901.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	97247	97714	.	+	.	ID=gene-RM680_RS01800;Name=RM680_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01800;old_locus_tag=RM680_01800
NZ_JAVRJI010000002.1	Protein Homology	CDS	97247	97714	.	+	0	ID=cds-WP_002456663.1;Parent=gene-RM680_RS01800;Dbxref=GenBank:WP_002456663.1;Name=WP_002456663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503369.1;locus_tag=RM680_RS01800;product=YehR family lipoprotein;protein_id=WP_002456663.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	97767	99344	.	-	.	ID=gene-RM680_RS01805;Name=RM680_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01805;old_locus_tag=RM680_01805
NZ_JAVRJI010000002.1	Protein Homology	CDS	97767	99344	.	-	0	ID=cds-WP_002484956.1;Parent=gene-RM680_RS01805;Dbxref=GenBank:WP_002484956.1;Name=WP_002484956.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501219.1;locus_tag=RM680_RS01805;product=FMN-binding glutamate synthase family protein;protein_id=WP_002484956.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	99489	100271	.	+	.	ID=gene-RM680_RS01810;Name=lnsB;gbkey=Gene;gene=lnsB;gene_biotype=protein_coding;locus_tag=RM680_RS01810;old_locus_tag=RM680_01810
NZ_JAVRJI010000002.1	Protein Homology	CDS	99489	100271	.	+	0	ID=cds-WP_002469561.1;Parent=gene-RM680_RS01810;Dbxref=GenBank:WP_002469561.1;Name=WP_002469561.1;gbkey=CDS;gene=lnsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495092.1;locus_tag=RM680_RS01810;product=CPBP family lipoprotein N-acylation protein LnsB;protein_id=WP_002469561.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	100310	100582	.	+	.	ID=gene-RM680_RS01815;Name=RM680_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01815;old_locus_tag=RM680_01815
NZ_JAVRJI010000002.1	Protein Homology	CDS	100310	100582	.	+	0	ID=cds-WP_255263166.1;Parent=gene-RM680_RS01815;Dbxref=GenBank:WP_255263166.1;Name=WP_255263166.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: protein motif:HMM:NF014566.6;locus_tag=RM680_RS01815;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_255263166.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	100878	101540	.	+	.	ID=gene-RM680_RS01820;Name=RM680_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01820;old_locus_tag=RM680_01820
NZ_JAVRJI010000002.1	Protein Homology	CDS	100878	101540	.	+	0	ID=cds-WP_001831406.1;Parent=gene-RM680_RS01820;Dbxref=GenBank:WP_001831406.1;Name=WP_001831406.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501499.1;locus_tag=RM680_RS01820;product=ABC transporter ATP-binding protein;protein_id=WP_001831406.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	101533	102309	.	+	.	ID=gene-RM680_RS01825;Name=RM680_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01825;old_locus_tag=RM680_01825
NZ_JAVRJI010000002.1	Protein Homology	CDS	101533	102309	.	+	0	ID=cds-WP_002469550.1;Parent=gene-RM680_RS01825;Dbxref=GenBank:WP_002469550.1;Name=WP_002469550.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501212.1;locus_tag=RM680_RS01825;product=ABC transporter permease;protein_id=WP_002469550.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	102448	103626	.	+	.	ID=gene-RM680_RS01830;Name=RM680_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01830;old_locus_tag=RM680_01830
NZ_JAVRJI010000002.1	Protein Homology	CDS	102448	103626	.	+	0	ID=cds-WP_002456659.1;Parent=gene-RM680_RS01830;Dbxref=GenBank:WP_002456659.1;Name=WP_002456659.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447157.1;locus_tag=RM680_RS01830;product=MFS transporter;protein_id=WP_002456659.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	103709	105064	.	-	.	ID=gene-RM680_RS01835;Name=RM680_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01835;old_locus_tag=RM680_01835
NZ_JAVRJI010000002.1	Protein Homology	CDS	103709	105064	.	-	0	ID=cds-WP_020368331.1;Parent=gene-RM680_RS01835;Dbxref=GenBank:WP_020368331.1;Name=WP_020368331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495096.1;locus_tag=RM680_RS01835;product=carboxylesterase family protein;protein_id=WP_020368331.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	105381	107060	.	-	.	ID=gene-RM680_RS01840;Name=RM680_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01840;old_locus_tag=RM680_01840
NZ_JAVRJI010000002.1	Protein Homology	CDS	105381	107060	.	-	0	ID=cds-WP_001832901.1;Parent=gene-RM680_RS01840;Dbxref=GenBank:WP_001832901.1;Name=WP_001832901.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498487.1;locus_tag=RM680_RS01840;product=APC family permease;protein_id=WP_001832901.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	pseudogene	107241	107510	.	+	.	ID=gene-RM680_RS01845;Name=RM680_RS01845;end_range=107510,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS01845;old_locus_tag=RM680_01845;partial=true;pseudo=true
NZ_JAVRJI010000002.1	Protein Homology	CDS	107241	107510	.	+	0	ID=cds-RM680_RS01845;Parent=gene-RM680_RS01845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=107510,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464543.1;locus_tag=RM680_RS01845;partial=true;product=DUF1801 domain-containing protein;pseudo=true;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	107661	108713	.	-	.	ID=gene-RM680_RS01850;Name=RM680_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01850;old_locus_tag=RM680_01850
NZ_JAVRJI010000002.1	Protein Homology	CDS	107661	108713	.	-	0	ID=cds-WP_001831524.1;Parent=gene-RM680_RS01850;Dbxref=GenBank:WP_001831524.1;Name=WP_001831524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432347.1;locus_tag=RM680_RS01850;product=2%2C3-butanediol dehydrogenase;protein_id=WP_001831524.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	109203	110459	.	+	.	ID=gene-RM680_RS01855;Name=RM680_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01855;old_locus_tag=RM680_01855
NZ_JAVRJI010000002.1	Protein Homology	CDS	109203	110459	.	+	0	ID=cds-WP_001831407.1;Parent=gene-RM680_RS01855;Dbxref=GenBank:WP_001831407.1;Name=WP_001831407.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831407.1;locus_tag=RM680_RS01855;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WP_001831407.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	110462	111097	.	+	.	ID=gene-RM680_RS01860;Name=RM680_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01860;old_locus_tag=RM680_01860
NZ_JAVRJI010000002.1	Protein Homology	CDS	110462	111097	.	+	0	ID=cds-WP_001831629.1;Parent=gene-RM680_RS01860;Dbxref=GenBank:WP_001831629.1;Name=WP_001831629.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637570.1;locus_tag=RM680_RS01860;product=ABC transporter permease;protein_id=WP_001831629.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	111114	112058	.	+	.	ID=gene-RM680_RS01865;Name=RM680_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01865;old_locus_tag=RM680_01865
NZ_JAVRJI010000002.1	Protein Homology	CDS	111114	112058	.	+	0	ID=cds-WP_001831552.1;Parent=gene-RM680_RS01865;Dbxref=GenBank:WP_001831552.1;Name=WP_001831552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474833.1;locus_tag=RM680_RS01865;product=osmoprotectant ABC transporter substrate-binding protein;protein_id=WP_001831552.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	112058	112753	.	+	.	ID=gene-RM680_RS01870;Name=RM680_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01870;old_locus_tag=RM680_01870
NZ_JAVRJI010000002.1	Protein Homology	CDS	112058	112753	.	+	0	ID=cds-WP_001831612.1;Parent=gene-RM680_RS01870;Dbxref=GenBank:WP_001831612.1;Name=WP_001831612.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475844.1;locus_tag=RM680_RS01870;product=ABC transporter permease;protein_id=WP_001831612.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	112935	113636	.	-	.	ID=gene-RM680_RS01875;Name=lrgB;gbkey=Gene;gene=lrgB;gene_biotype=protein_coding;locus_tag=RM680_RS01875;old_locus_tag=RM680_01875
NZ_JAVRJI010000002.1	Protein Homology	CDS	112935	113636	.	-	0	ID=cds-WP_001831408.1;Parent=gene-RM680_RS01875;Dbxref=GenBank:WP_001831408.1;Name=WP_001831408.1;gbkey=CDS;gene=lrgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491128.1;locus_tag=RM680_RS01875;product=antiholin-like protein LrgB;protein_id=WP_001831408.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	113640	114089	.	-	.	ID=gene-RM680_RS01880;Name=lrgA;gbkey=Gene;gene=lrgA;gene_biotype=protein_coding;locus_tag=RM680_RS01880;old_locus_tag=RM680_01880
NZ_JAVRJI010000002.1	Protein Homology	CDS	113640	114089	.	-	0	ID=cds-WP_001831627.1;Parent=gene-RM680_RS01880;Dbxref=GenBank:WP_001831627.1;Name=WP_001831627.1;gbkey=CDS;gene=lrgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491083.1;locus_tag=RM680_RS01880;product=antiholin-like murein hydrolase modulator LrgA;protein_id=WP_001831627.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	114233	114991	.	-	.	ID=gene-RM680_RS01885;Name=RM680_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01885;old_locus_tag=RM680_01885
NZ_JAVRJI010000002.1	Protein Homology	CDS	114233	114991	.	-	0	ID=cds-WP_001831505.1;Parent=gene-RM680_RS01885;Dbxref=GenBank:WP_001831505.1;Name=WP_001831505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474851.1;locus_tag=RM680_RS01885;product=response regulator transcription factor LytR;protein_id=WP_001831505.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	114972	116747	.	-	.	ID=gene-RM680_RS01890;Name=RM680_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01890;old_locus_tag=RM680_01890
NZ_JAVRJI010000002.1	Protein Homology	CDS	114972	116747	.	-	0	ID=cds-WP_001831559.1;Parent=gene-RM680_RS01890;Dbxref=GenBank:WP_001831559.1;Name=WP_001831559.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368660.1;locus_tag=RM680_RS01890;product=sensor histidine kinase;protein_id=WP_001831559.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	117171	118571	.	+	.	ID=gene-RM680_RS01895;Name=RM680_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01895;old_locus_tag=RM680_01895
NZ_JAVRJI010000002.1	Protein Homology	CDS	117171	118571	.	+	0	ID=cds-WP_001831421.1;Parent=gene-RM680_RS01895;Dbxref=GenBank:WP_001831421.1;Name=WP_001831421.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501201.1;locus_tag=RM680_RS01895;product=MFS transporter;protein_id=WP_001831421.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	118995	119927	.	+	.	ID=gene-RM680_RS01900;Name=RM680_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01900;old_locus_tag=RM680_01900
NZ_JAVRJI010000002.1	Protein Homology	CDS	118995	119927	.	+	0	ID=cds-WP_001831565.1;Parent=gene-RM680_RS01900;Dbxref=GenBank:WP_001831565.1;Name=WP_001831565.1;Ontology_term=GO:0015940,GO:0008677,GO:0050661;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA,NADP binding|0050661||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831565.1;locus_tag=RM680_RS01900;product=2-dehydropantoate 2-reductase;protein_id=WP_001831565.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	120050	120886	.	-	.	ID=gene-RM680_RS01905;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=RM680_RS01905;old_locus_tag=RM680_01905
NZ_JAVRJI010000002.1	Protein Homology	CDS	120050	120886	.	-	0	ID=cds-WP_001832893.1;Parent=gene-RM680_RS01905;Dbxref=GenBank:WP_001832893.1;Name=WP_001832893.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485922.1;locus_tag=RM680_RS01905;product=membrane protein insertase YidC;protein_id=WP_001832893.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	121047	122564	.	-	.	ID=gene-RM680_RS01910;Name=RM680_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01910;old_locus_tag=RM680_01910
NZ_JAVRJI010000002.1	Protein Homology	CDS	121047	122564	.	-	0	ID=cds-WP_311563496.1;Parent=gene-RM680_RS01910;Dbxref=GenBank:WP_311563496.1;Name=WP_311563496.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468202.1;locus_tag=RM680_RS01910;product=serine hydrolase domain-containing protein;protein_id=WP_311563496.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	122851	124680	.	+	.	ID=gene-RM680_RS01915;Name=RM680_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01915;old_locus_tag=RM680_01915
NZ_JAVRJI010000002.1	Protein Homology	CDS	122851	124680	.	+	0	ID=cds-WP_001831444.1;Parent=gene-RM680_RS01915;Dbxref=GenBank:WP_001831444.1;Name=WP_001831444.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501195.1;locus_tag=RM680_RS01915;product=APC family permease;protein_id=WP_001831444.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	124828	126204	.	-	.	ID=gene-RM680_RS01920;Name=RM680_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01920;old_locus_tag=RM680_01920
NZ_JAVRJI010000002.1	Protein Homology	CDS	124828	126204	.	-	0	ID=cds-WP_001832903.1;Parent=gene-RM680_RS01920;Dbxref=GenBank:WP_001832903.1;Name=WP_001832903.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468224.1;locus_tag=RM680_RS01920;product=amino acid permease;protein_id=WP_001832903.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	126522	127331	.	+	.	ID=gene-RM680_RS01925;Name=RM680_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01925;old_locus_tag=RM680_01925
NZ_JAVRJI010000002.1	Protein Homology	CDS	126522	127331	.	+	0	ID=cds-WP_001831607.1;Parent=gene-RM680_RS01925;Dbxref=GenBank:WP_001831607.1;Name=WP_001831607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464550.1;locus_tag=RM680_RS01925;product=metallophosphoesterase;protein_id=WP_001831607.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	127394	128002	.	-	.	ID=gene-RM680_RS01930;Name=RM680_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01930;old_locus_tag=RM680_01930
NZ_JAVRJI010000002.1	Protein Homology	CDS	127394	128002	.	-	0	ID=cds-WP_002438268.1;Parent=gene-RM680_RS01930;Dbxref=GenBank:WP_002438268.1;Name=WP_002438268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438268.1;locus_tag=RM680_RS01930;product=C39 family peptidase;protein_id=WP_002438268.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	128309	129508	.	-	.	ID=gene-RM680_RS01935;Name=RM680_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01935;old_locus_tag=RM680_01935
NZ_JAVRJI010000002.1	Protein Homology	CDS	128309	129508	.	-	0	ID=cds-WP_001831574.1;Parent=gene-RM680_RS01935;Dbxref=GenBank:WP_001831574.1;Name=WP_001831574.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468290.1;locus_tag=RM680_RS01935;product=multidrug effflux MFS transporter;protein_id=WP_001831574.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	129772	130473	.	-	.	ID=gene-RM680_RS01940;Name=RM680_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01940;old_locus_tag=RM680_01940
NZ_JAVRJI010000002.1	Protein Homology	CDS	129772	130473	.	-	0	ID=cds-WP_001831448.1;Parent=gene-RM680_RS01940;Dbxref=GenBank:WP_001831448.1;Name=WP_001831448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456653.1;locus_tag=RM680_RS01940;product=membrane protein;protein_id=WP_001831448.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	130504	131655	.	-	.	ID=gene-RM680_RS01945;Name=RM680_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01945;old_locus_tag=RM680_01945
NZ_JAVRJI010000002.1	Protein Homology	CDS	130504	131655	.	-	0	ID=cds-WP_001831597.1;Parent=gene-RM680_RS01945;Dbxref=GenBank:WP_001831597.1;Name=WP_001831597.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831597.1;locus_tag=RM680_RS01945;product=glycerate kinase;protein_id=WP_001831597.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	131940	133412	.	+	.	ID=gene-RM680_RS01950;Name=RM680_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01950;old_locus_tag=RM680_01950
NZ_JAVRJI010000002.1	Protein Homology	CDS	131940	133412	.	+	0	ID=cds-WP_002484949.1;Parent=gene-RM680_RS01950;Dbxref=GenBank:WP_002484949.1;Name=WP_002484949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496283.1;locus_tag=RM680_RS01950;product=DUF6056 family protein;protein_id=WP_002484949.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	133433	133819	.	+	.	ID=gene-RM680_RS01955;Name=RM680_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01955;old_locus_tag=RM680_01955
NZ_JAVRJI010000002.1	Protein Homology	CDS	133433	133819	.	+	0	ID=cds-WP_002470207.1;Parent=gene-RM680_RS01955;Dbxref=GenBank:WP_002470207.1;Name=WP_002470207.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456051.1;locus_tag=RM680_RS01955;product=GtrA family protein;protein_id=WP_002470207.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	134110	134991	.	+	.	ID=gene-RM680_RS01960;Name=RM680_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01960;old_locus_tag=RM680_01960
NZ_JAVRJI010000002.1	Protein Homology	CDS	134110	134991	.	+	0	ID=cds-WP_002456052.1;Parent=gene-RM680_RS01960;Dbxref=GenBank:WP_002456052.1;Name=WP_002456052.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458142.1;locus_tag=RM680_RS01960;product=cation diffusion facilitator family transporter;protein_id=WP_002456052.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	135267	135953	.	+	.	ID=gene-RM680_RS01965;Name=RM680_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01965;old_locus_tag=RM680_01965
NZ_JAVRJI010000002.1	Protein Homology	CDS	135267	135953	.	+	0	ID=cds-WP_001831569.1;Parent=gene-RM680_RS01965;Dbxref=GenBank:WP_001831569.1;Name=WP_001831569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501165.1;locus_tag=RM680_RS01965;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_001831569.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	136139	136243	.	-	.	ID=gene-RM680_RS01970;Name=RM680_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01970;old_locus_tag=RM680_01970
NZ_JAVRJI010000002.1	Protein Homology	CDS	136139	136243	.	-	0	ID=cds-WP_002438284.1;Parent=gene-RM680_RS01970;Dbxref=GenBank:WP_002438284.1;Name=WP_002438284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501164.1;locus_tag=RM680_RS01970;product=putative metal homeostasis protein;protein_id=WP_002438284.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	136458	137246	.	+	.	ID=gene-RM680_RS01975;Name=RM680_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01975;old_locus_tag=RM680_01975
NZ_JAVRJI010000002.1	Protein Homology	CDS	136458	137246	.	+	0	ID=cds-WP_001831492.1;Parent=gene-RM680_RS01975;Dbxref=GenBank:WP_001831492.1;Name=WP_001831492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368118.1;locus_tag=RM680_RS01975;product=transporter substrate-binding domain-containing protein;protein_id=WP_001831492.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	137227	137946	.	+	.	ID=gene-RM680_RS01980;Name=RM680_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01980;old_locus_tag=RM680_01980
NZ_JAVRJI010000002.1	Protein Homology	CDS	137227	137946	.	+	0	ID=cds-WP_001831576.1;Parent=gene-RM680_RS01980;Dbxref=GenBank:WP_001831576.1;Name=WP_001831576.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501160.1;locus_tag=RM680_RS01980;product=amino acid ABC transporter permease;protein_id=WP_001831576.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	137943	138674	.	+	.	ID=gene-RM680_RS01985;Name=RM680_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01985;old_locus_tag=RM680_01985
NZ_JAVRJI010000002.1	Protein Homology	CDS	137943	138674	.	+	0	ID=cds-WP_002502566.1;Parent=gene-RM680_RS01985;Dbxref=GenBank:WP_002502566.1;Name=WP_002502566.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501159.1;locus_tag=RM680_RS01985;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002502566.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	138815	138970	.	-	.	ID=gene-RM680_RS01990;Name=RM680_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01990;old_locus_tag=RM680_01990
NZ_JAVRJI010000002.1	GeneMarkS-2+	CDS	138815	138970	.	-	0	ID=cds-WP_002477074.1;Parent=gene-RM680_RS01990;Dbxref=GenBank:WP_002477074.1;Name=WP_002477074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS01990;product=hypothetical protein;protein_id=WP_002477074.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	139356	140603	.	-	.	ID=gene-RM680_RS01995;Name=RM680_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS01995;old_locus_tag=RM680_01995
NZ_JAVRJI010000002.1	Protein Homology	CDS	139356	140603	.	-	0	ID=cds-WP_002438293.1;Parent=gene-RM680_RS01995;Dbxref=GenBank:WP_002438293.1;Name=WP_002438293.1;Ontology_term=GO:0008360,GO:0009252,GO:0071555,GO:0016755,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=aminoacyltransferase activity|0016755||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502565.1;locus_tag=RM680_RS01995;product=aminoacyltransferase;protein_id=WP_002438293.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	140964	141326	.	+	.	ID=gene-RM680_RS02000;Name=RM680_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02000;old_locus_tag=RM680_02000
NZ_JAVRJI010000002.1	Protein Homology	CDS	140964	141326	.	+	0	ID=cds-WP_001831622.1;Parent=gene-RM680_RS02000;Dbxref=GenBank:WP_001831622.1;Name=WP_001831622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831622.1;locus_tag=RM680_RS02000;product=DUF4467 domain-containing protein;protein_id=WP_001831622.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	141350	141946	.	+	.	ID=gene-RM680_RS02005;Name=RM680_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02005;old_locus_tag=RM680_02005
NZ_JAVRJI010000002.1	Protein Homology	CDS	141350	141946	.	+	0	ID=cds-WP_002438295.1;Parent=gene-RM680_RS02005;Dbxref=GenBank:WP_002438295.1;Name=WP_002438295.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499881.1;locus_tag=RM680_RS02005;product=DsbA family protein;protein_id=WP_002438295.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	142228	142698	.	+	.	ID=gene-RM680_RS02010;Name=RM680_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02010;old_locus_tag=RM680_02010
NZ_JAVRJI010000002.1	Protein Homology	CDS	142228	142698	.	+	0	ID=cds-WP_002438297.1;Parent=gene-RM680_RS02010;Dbxref=GenBank:WP_002438297.1;Name=WP_002438297.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465282.1;locus_tag=RM680_RS02010;product=SRPBCC family protein;protein_id=WP_002438297.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	142933	143754	.	+	.	ID=gene-RM680_RS02015;Name=RM680_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02015;old_locus_tag=RM680_02015
NZ_JAVRJI010000002.1	Protein Homology	CDS	142933	143754	.	+	0	ID=cds-WP_002438299.1;Parent=gene-RM680_RS02015;Dbxref=GenBank:WP_002438299.1;Name=WP_002438299.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831430.1;locus_tag=RM680_RS02015;product=formate/nitrite transporter family protein;protein_id=WP_002438299.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	144197	144733	.	+	.	ID=gene-RM680_RS02020;Name=RM680_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02020;old_locus_tag=RM680_02020
NZ_JAVRJI010000002.1	Protein Homology	CDS	144197	144733	.	+	0	ID=cds-WP_002438301.1;Parent=gene-RM680_RS02020;Dbxref=GenBank:WP_002438301.1;Name=WP_002438301.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468285.1;locus_tag=RM680_RS02020;product=GNAT family N-acetyltransferase;protein_id=WP_002438301.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	145033	145188	.	-	.	ID=gene-RM680_RS02025;Name=RM680_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02025;old_locus_tag=RM680_02025
NZ_JAVRJI010000002.1	GeneMarkS-2+	CDS	145033	145188	.	-	0	ID=cds-WP_001831613.1;Parent=gene-RM680_RS02025;Dbxref=GenBank:WP_001831613.1;Name=WP_001831613.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS02025;product=hypothetical protein;protein_id=WP_001831613.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	145469	146944	.	-	.	ID=gene-RM680_RS02030;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=RM680_RS02030;old_locus_tag=RM680_02030
NZ_JAVRJI010000002.1	Protein Homology	CDS	145469	146944	.	-	0	ID=cds-WP_002438303.1;Parent=gene-RM680_RS02030;Dbxref=GenBank:WP_002438303.1;Name=WP_002438303.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447192.1;locus_tag=RM680_RS02030;product=nickel ABC transporter substrate-binding protein;protein_id=WP_002438303.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	147194	147913	.	+	.	ID=gene-RM680_RS02035;Name=RM680_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02035;old_locus_tag=RM680_02035
NZ_JAVRJI010000002.1	Protein Homology	CDS	147194	147913	.	+	0	ID=cds-WP_002456056.1;Parent=gene-RM680_RS02035;Dbxref=GenBank:WP_002456056.1;Name=WP_002456056.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831601.1;locus_tag=RM680_RS02035;product=sirohydrochlorin chelatase;protein_id=WP_002456056.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	148351	150756	.	+	.	ID=gene-RM680_RS02040;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=RM680_RS02040;old_locus_tag=RM680_02040
NZ_JAVRJI010000002.1	Protein Homology	CDS	148351	150756	.	+	0	ID=cds-WP_002438309.1;Parent=gene-RM680_RS02040;Dbxref=GenBank:WP_002438309.1;Name=WP_002438309.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501146.1;locus_tag=RM680_RS02040;product=nitrite reductase large subunit NirB;protein_id=WP_002438309.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	150759	151073	.	+	.	ID=gene-RM680_RS02045;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=RM680_RS02045;old_locus_tag=RM680_02045
NZ_JAVRJI010000002.1	Protein Homology	CDS	150759	151073	.	+	0	ID=cds-WP_002438311.1;Parent=gene-RM680_RS02045;Dbxref=GenBank:WP_002438311.1;Name=WP_002438311.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831573.1;locus_tag=RM680_RS02045;product=nitrite reductase small subunit NirD;protein_id=WP_002438311.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	151064	151999	.	+	.	ID=gene-RM680_RS02050;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=RM680_RS02050;old_locus_tag=RM680_02050
NZ_JAVRJI010000002.1	Protein Homology	CDS	151064	151999	.	+	0	ID=cds-WP_002438313.1;Parent=gene-RM680_RS02050;Dbxref=GenBank:WP_002438313.1;Name=WP_002438313.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498516.1;locus_tag=RM680_RS02050;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_002438313.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	152178	155861	.	+	.	ID=gene-RM680_RS02055;Name=RM680_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02055;old_locus_tag=RM680_02055
NZ_JAVRJI010000002.1	Protein Homology	CDS	152178	155861	.	+	0	ID=cds-WP_002456057.1;Parent=gene-RM680_RS02055;Dbxref=GenBank:WP_002456057.1;Name=WP_002456057.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=RM680_RS02055;product=nitrate reductase subunit alpha;protein_id=WP_002456057.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	155851	157404	.	+	.	ID=gene-RM680_RS02060;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=RM680_RS02060;old_locus_tag=RM680_02060
NZ_JAVRJI010000002.1	Protein Homology	CDS	155851	157404	.	+	0	ID=cds-WP_002438317.1;Parent=gene-RM680_RS02060;Dbxref=GenBank:WP_002438317.1;Name=WP_002438317.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384084.1;locus_tag=RM680_RS02060;product=nitrate reductase subunit beta;protein_id=WP_002438317.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	157397	157972	.	+	.	ID=gene-RM680_RS02065;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=RM680_RS02065;old_locus_tag=RM680_02065
NZ_JAVRJI010000002.1	Protein Homology	CDS	157397	157972	.	+	0	ID=cds-WP_375713979.1;Parent=gene-RM680_RS02065;Dbxref=GenBank:WP_375713979.1;Name=WP_375713979.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606770.1;locus_tag=RM680_RS02065;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_375713979.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	157965	158642	.	+	.	ID=gene-RM680_RS02070;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=RM680_RS02070;old_locus_tag=RM680_02070
NZ_JAVRJI010000002.1	Protein Homology	CDS	157965	158642	.	+	0	ID=cds-WP_002438321.1;Parent=gene-RM680_RS02070;Dbxref=GenBank:WP_002438321.1;Name=WP_002438321.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000934150.1;locus_tag=RM680_RS02070;product=respiratory nitrate reductase subunit gamma;protein_id=WP_002438321.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	158662	159114	.	+	.	ID=gene-RM680_RS02075;Name=nreA;gbkey=Gene;gene=nreA;gene_biotype=protein_coding;locus_tag=RM680_RS02075;old_locus_tag=RM680_02075
NZ_JAVRJI010000002.1	Protein Homology	CDS	158662	159114	.	+	0	ID=cds-WP_001831592.1;Parent=gene-RM680_RS02075;Dbxref=GenBank:WP_001831592.1;Name=WP_001831592.1;gbkey=CDS;gene=nreA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831592.1;locus_tag=RM680_RS02075;product=nitrate respiration regulation accessory nitrate sensor NreA;protein_id=WP_001831592.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	159124	160158	.	+	.	ID=gene-RM680_RS02080;Name=RM680_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02080;old_locus_tag=RM680_02080
NZ_JAVRJI010000002.1	Protein Homology	CDS	159124	160158	.	+	0	ID=cds-WP_002456059.1;Parent=gene-RM680_RS02080;Dbxref=GenBank:WP_002456059.1;Name=WP_002456059.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360845.1;locus_tag=RM680_RS02080;product=sensor histidine kinase;protein_id=WP_002456059.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	160187	160843	.	+	.	ID=gene-RM680_RS02085;Name=nreC;gbkey=Gene;gene=nreC;gene_biotype=protein_coding;locus_tag=RM680_RS02085;old_locus_tag=RM680_02085
NZ_JAVRJI010000002.1	Protein Homology	CDS	160187	160843	.	+	0	ID=cds-WP_002438326.1;Parent=gene-RM680_RS02085;Dbxref=GenBank:WP_002438326.1;Name=WP_002438326.1;Note=Involved in the regulation of the the nitrate reductase operon narGHJI;gbkey=CDS;gene=nreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464689.1;locus_tag=RM680_RS02085;product=nitrate respiration regulation response regulator NreC;protein_id=WP_002438326.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	161100	162263	.	+	.	ID=gene-RM680_RS02090;Name=RM680_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02090;old_locus_tag=RM680_02090
NZ_JAVRJI010000002.1	Protein Homology	CDS	161100	162263	.	+	0	ID=cds-WP_002438328.1;Parent=gene-RM680_RS02090;Dbxref=GenBank:WP_002438328.1;Name=WP_002438328.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497682.1;locus_tag=RM680_RS02090;product=nitrate/nitrite transporter;protein_id=WP_002438328.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	162968	163414	.	-	.	ID=gene-RM680_RS02095;Name=RM680_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02095;old_locus_tag=RM680_02095
NZ_JAVRJI010000002.1	Protein Homology	CDS	162968	163414	.	-	0	ID=cds-WP_002438330.1;Parent=gene-RM680_RS02095;Dbxref=GenBank:WP_002438330.1;Name=WP_002438330.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501131.1;locus_tag=RM680_RS02095;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_002438330.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	163578	164207	.	+	.	ID=gene-RM680_RS02100;Name=RM680_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02100;old_locus_tag=RM680_02100
NZ_JAVRJI010000002.1	Protein Homology	CDS	163578	164207	.	+	0	ID=cds-WP_002438333.1;Parent=gene-RM680_RS02100;Dbxref=GenBank:WP_002438333.1;Name=WP_002438333.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832922.1;locus_tag=RM680_RS02100;product=nitroreductase family protein;protein_id=WP_002438333.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	164331	164696	.	+	.	ID=gene-RM680_RS02105;Name=RM680_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02105;old_locus_tag=RM680_02105
NZ_JAVRJI010000002.1	Protein Homology	CDS	164331	164696	.	+	0	ID=cds-WP_001831482.1;Parent=gene-RM680_RS02105;Dbxref=GenBank:WP_001831482.1;Name=WP_001831482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491065.1;locus_tag=RM680_RS02105;product=DUF3139 domain-containing protein;protein_id=WP_001831482.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	164862	166142	.	+	.	ID=gene-RM680_RS02110;Name=RM680_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02110;old_locus_tag=RM680_02110
NZ_JAVRJI010000002.1	Protein Homology	CDS	164862	166142	.	+	0	ID=cds-WP_001831600.1;Parent=gene-RM680_RS02110;Dbxref=GenBank:WP_001831600.1;Name=WP_001831600.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501129.1;locus_tag=RM680_RS02110;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_001831600.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	166367	166717	.	-	.	ID=gene-RM680_RS02115;Name=RM680_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02115;old_locus_tag=RM680_02115
NZ_JAVRJI010000002.1	Protein Homology	CDS	166367	166717	.	-	0	ID=cds-WP_001831556.1;Parent=gene-RM680_RS02115;Dbxref=GenBank:WP_001831556.1;Name=WP_001831556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456647.1;locus_tag=RM680_RS02115;product=DUF4889 domain-containing protein;protein_id=WP_001831556.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	166908	167330	.	-	.	ID=gene-RM680_RS02120;Name=RM680_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02120;old_locus_tag=RM680_02120
NZ_JAVRJI010000002.1	Protein Homology	CDS	166908	167330	.	-	0	ID=cds-WP_001831589.1;Parent=gene-RM680_RS02120;Dbxref=GenBank:WP_001831589.1;Name=WP_001831589.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181,GO:0016491;gbkey=CDS;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495111.1;locus_tag=RM680_RS02120;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_001831589.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	167403	169508	.	-	.	ID=gene-RM680_RS02125;Name=rsp;gbkey=Gene;gene=rsp;gene_biotype=protein_coding;locus_tag=RM680_RS02125;old_locus_tag=RM680_02125
NZ_JAVRJI010000002.1	Protein Homology	CDS	167403	169508	.	-	0	ID=cds-WP_001831437.1;Parent=gene-RM680_RS02125;Dbxref=GenBank:WP_001831437.1;Name=WP_001831437.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=rsp;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366872.1;locus_tag=RM680_RS02125;product=AraC family transcriptional regulator Rsp;protein_id=WP_001831437.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	170671	171048	.	-	.	ID=gene-RM680_RS02130;Name=RM680_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02130;old_locus_tag=RM680_02130
NZ_JAVRJI010000002.1	Protein Homology	CDS	170671	171048	.	-	0	ID=cds-WP_001831516.1;Parent=gene-RM680_RS02130;Dbxref=GenBank:WP_001831516.1;Name=WP_001831516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487021.1;locus_tag=RM680_RS02130;product=YbgA family protein;protein_id=WP_001831516.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	171202	172647	.	+	.	ID=gene-RM680_RS02135;Name=RM680_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02135;old_locus_tag=RM680_02135
NZ_JAVRJI010000002.1	Protein Homology	CDS	171202	172647	.	+	0	ID=cds-WP_001831450.1;Parent=gene-RM680_RS02135;Dbxref=GenBank:WP_001831450.1;Name=WP_001831450.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474489.1;locus_tag=RM680_RS02135;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_001831450.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	172737	173684	.	-	.	ID=gene-RM680_RS02140;Name=RM680_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02140;old_locus_tag=RM680_02140
NZ_JAVRJI010000002.1	Protein Homology	CDS	172737	173684	.	-	0	ID=cds-WP_001831471.1;Parent=gene-RM680_RS02140;Dbxref=GenBank:WP_001831471.1;Name=WP_001831471.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831471.1;locus_tag=RM680_RS02140;product=magnesium transporter CorA family protein;protein_id=WP_001831471.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	pseudogene	174297	175541	.	+	.	ID=gene-RM680_RS02145;Name=RM680_RS02145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS02145;old_locus_tag=RM680_02145;pseudo=true
NZ_JAVRJI010000002.1	Protein Homology	CDS	174297	175541	.	+	0	ID=cds-RM680_RS02145;Parent=gene-RM680_RS02145;Note=internal stop;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464726.1;locus_tag=RM680_RS02145;product=copper resistance CopC/CopD family protein;pseudo=true;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	175553	175822	.	+	.	ID=gene-RM680_RS02150;Name=RM680_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02150;old_locus_tag=RM680_02150
NZ_JAVRJI010000002.1	Protein Homology	CDS	175553	175822	.	+	0	ID=cds-WP_001831541.1;Parent=gene-RM680_RS02150;Dbxref=GenBank:WP_001831541.1;Name=WP_001831541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486071.1;locus_tag=RM680_RS02150;product=DUF1775 domain-containing protein;protein_id=WP_001831541.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	175864	176145	.	+	.	ID=gene-RM680_RS02155;Name=RM680_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02155;old_locus_tag=RM680_02155
NZ_JAVRJI010000002.1	Protein Homology	CDS	175864	176145	.	+	0	ID=cds-WP_323680487.1;Parent=gene-RM680_RS02155;Dbxref=GenBank:WP_323680487.1;Name=WP_323680487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831412.1;locus_tag=RM680_RS02155;product=transporter;protein_id=WP_323680487.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	176359	176775	.	+	.	ID=gene-RM680_RS02160;Name=RM680_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02160;old_locus_tag=RM680_02160
NZ_JAVRJI010000002.1	Protein Homology	CDS	176359	176775	.	+	0	ID=cds-WP_001831504.1;Parent=gene-RM680_RS02160;Dbxref=GenBank:WP_001831504.1;Name=WP_001831504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457296.1;locus_tag=RM680_RS02160;product=DUF2871 domain-containing protein;protein_id=WP_001831504.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	176844	177245	.	+	.	ID=gene-RM680_RS02165;Name=RM680_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02165;old_locus_tag=RM680_02165
NZ_JAVRJI010000002.1	Protein Homology	CDS	176844	177245	.	+	0	ID=cds-WP_001831590.1;Parent=gene-RM680_RS02165;Dbxref=GenBank:WP_001831590.1;Name=WP_001831590.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457295.1;locus_tag=RM680_RS02165;product=GNAT family N-acetyltransferase;protein_id=WP_001831590.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	177309	178301	.	-	.	ID=gene-RM680_RS02170;Name=RM680_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02170;old_locus_tag=RM680_02170
NZ_JAVRJI010000002.1	Protein Homology	CDS	177309	178301	.	-	0	ID=cds-WP_001832888.1;Parent=gene-RM680_RS02170;Dbxref=GenBank:WP_001832888.1;Name=WP_001832888.1;Ontology_term=GO:0016655,GO:0048038,GO:0070402;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501848.1;locus_tag=RM680_RS02170;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_001832888.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	178544	179083	.	+	.	ID=gene-RM680_RS02175;Name=RM680_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02175;old_locus_tag=RM680_02175
NZ_JAVRJI010000002.1	Protein Homology	CDS	178544	179083	.	+	0	ID=cds-WP_001831619.1;Parent=gene-RM680_RS02175;Dbxref=GenBank:WP_001831619.1;Name=WP_001831619.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485928.1;locus_tag=RM680_RS02175;product=GNAT family N-acetyltransferase;protein_id=WP_001831619.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	179355	181520	.	+	.	ID=gene-RM680_RS02180;Name=RM680_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02180;old_locus_tag=RM680_02180
NZ_JAVRJI010000002.1	Protein Homology	CDS	179355	181520	.	+	0	ID=cds-WP_001831435.1;Parent=gene-RM680_RS02180;Dbxref=GenBank:WP_001831435.1;Name=WP_001831435.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447216.1;locus_tag=RM680_RS02180;product=bifunctional glycosyltransferase/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_001831435.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	181649	182296	.	+	.	ID=gene-RM680_RS02185;Name=RM680_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02185;old_locus_tag=RM680_02185
NZ_JAVRJI010000002.1	Protein Homology	CDS	181649	182296	.	+	0	ID=cds-WP_001831614.1;Parent=gene-RM680_RS02185;Dbxref=GenBank:WP_001831614.1;Name=WP_001831614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500847.1;locus_tag=RM680_RS02185;product=hypothetical protein;protein_id=WP_001831614.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	182428	184107	.	-	.	ID=gene-RM680_RS02190;Name=RM680_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02190;old_locus_tag=RM680_02190
NZ_JAVRJI010000002.1	Protein Homology	CDS	182428	184107	.	-	0	ID=cds-WP_001831509.1;Parent=gene-RM680_RS02190;Dbxref=GenBank:WP_001831509.1;Name=WP_001831509.1;Ontology_term=GO:0019350,GO:0071555,GO:0047355;gbkey=CDS;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500848.1;locus_tag=RM680_RS02190;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_001831509.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	184457	186058	.	+	.	ID=gene-RM680_RS02195;Name=RM680_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02195;old_locus_tag=RM680_02195
NZ_JAVRJI010000002.1	Protein Homology	CDS	184457	186058	.	+	0	ID=cds-WP_001831564.1;Parent=gene-RM680_RS02195;Dbxref=GenBank:WP_001831564.1;Name=WP_001831564.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477096.1;locus_tag=RM680_RS02195;product=L-lactate permease;protein_id=WP_001831564.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	186263	187408	.	-	.	ID=gene-RM680_RS02200;Name=RM680_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02200;old_locus_tag=RM680_02200
NZ_JAVRJI010000002.1	Protein Homology	CDS	186263	187408	.	-	0	ID=cds-WP_001831623.1;Parent=gene-RM680_RS02200;Dbxref=GenBank:WP_001831623.1;Name=WP_001831623.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457290.1;locus_tag=RM680_RS02200;product=glycosyltransferase family 4 protein;protein_id=WP_001831623.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	187740	189218	.	+	.	ID=gene-RM680_RS02205;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=RM680_RS02205;old_locus_tag=RM680_02205
NZ_JAVRJI010000002.1	Protein Homology	CDS	187740	189218	.	+	0	ID=cds-WP_001831551.1;Parent=gene-RM680_RS02205;Dbxref=GenBank:WP_001831551.1;Name=WP_001831551.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501109.1;locus_tag=RM680_RS02205;product=malate dehydrogenase (quinone);protein_id=WP_001831551.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	189362	190717	.	-	.	ID=gene-RM680_RS02210;Name=RM680_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02210;old_locus_tag=RM680_02210
NZ_JAVRJI010000002.1	Protein Homology	CDS	189362	190717	.	-	0	ID=cds-WP_001832894.1;Parent=gene-RM680_RS02210;Dbxref=GenBank:WP_001832894.1;Name=WP_001832894.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491105.1;locus_tag=RM680_RS02210;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_001832894.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	190710	191384	.	-	.	ID=gene-RM680_RS02215;Name=RM680_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02215;old_locus_tag=RM680_02215
NZ_JAVRJI010000002.1	Protein Homology	CDS	190710	191384	.	-	0	ID=cds-WP_001831555.1;Parent=gene-RM680_RS02215;Dbxref=GenBank:WP_001831555.1;Name=WP_001831555.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468239.1;locus_tag=RM680_RS02215;product=response regulator transcription factor;protein_id=WP_001831555.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	191516	192568	.	+	.	ID=gene-RM680_RS02220;Name=RM680_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02220;old_locus_tag=RM680_02220
NZ_JAVRJI010000002.1	Protein Homology	CDS	191516	192568	.	+	0	ID=cds-WP_001831464.1;Parent=gene-RM680_RS02220;Dbxref=GenBank:WP_001831464.1;Name=WP_001831464.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496259.1;locus_tag=RM680_RS02220;product=ABC transporter permease;protein_id=WP_001831464.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	192568	193236	.	+	.	ID=gene-RM680_RS02225;Name=RM680_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02225;old_locus_tag=RM680_02225
NZ_JAVRJI010000002.1	Protein Homology	CDS	192568	193236	.	+	0	ID=cds-WP_001831526.1;Parent=gene-RM680_RS02225;Dbxref=GenBank:WP_001831526.1;Name=WP_001831526.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447225.1;locus_tag=RM680_RS02225;product=ABC transporter ATP-binding protein;protein_id=WP_001831526.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	193517	194473	.	-	.	ID=gene-RM680_RS02230;Name=RM680_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02230;old_locus_tag=RM680_02230
NZ_JAVRJI010000002.1	Protein Homology	CDS	193517	194473	.	-	0	ID=cds-WP_001832886.1;Parent=gene-RM680_RS02230;Dbxref=GenBank:WP_001832886.1;Name=WP_001832886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438374.1;locus_tag=RM680_RS02230;product=YdcF family protein;protein_id=WP_001832886.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	194661	195116	.	+	.	ID=gene-RM680_RS02235;Name=RM680_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02235;old_locus_tag=RM680_02235
NZ_JAVRJI010000002.1	Protein Homology	CDS	194661	195116	.	+	0	ID=cds-WP_001832914.1;Parent=gene-RM680_RS02235;Dbxref=GenBank:WP_001832914.1;Name=WP_001832914.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477104.1;locus_tag=RM680_RS02235;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001832914.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	195396	196784	.	+	.	ID=gene-RM680_RS02240;Name=RM680_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02240;old_locus_tag=RM680_02240
NZ_JAVRJI010000002.1	Protein Homology	CDS	195396	196784	.	+	0	ID=cds-WP_001831625.1;Parent=gene-RM680_RS02240;Dbxref=GenBank:WP_001831625.1;Name=WP_001831625.1;Ontology_term=GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487032.1;locus_tag=RM680_RS02240;product=zinc ribbon domain-containing protein;protein_id=WP_001831625.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	196842	198053	.	+	.	ID=gene-RM680_RS02245;Name=RM680_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02245;old_locus_tag=RM680_02245
NZ_JAVRJI010000002.1	Protein Homology	CDS	196842	198053	.	+	0	ID=cds-WP_001831540.1;Parent=gene-RM680_RS02245;Dbxref=GenBank:WP_001831540.1;Name=WP_001831540.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464738.1;locus_tag=RM680_RS02245;product=multidrug effflux MFS transporter;protein_id=WP_001831540.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	198090	198641	.	-	.	ID=gene-RM680_RS02250;Name=RM680_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02250;old_locus_tag=RM680_02250
NZ_JAVRJI010000002.1	Protein Homology	CDS	198090	198641	.	-	0	ID=cds-WP_002438383.1;Parent=gene-RM680_RS02250;Dbxref=GenBank:WP_002438383.1;Name=WP_002438383.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474477.1;locus_tag=RM680_RS02250;product=TetR/AcrR family transcriptional regulator;protein_id=WP_002438383.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	198782	199429	.	+	.	ID=gene-RM680_RS02255;Name=RM680_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02255;old_locus_tag=RM680_02255
NZ_JAVRJI010000002.1	Protein Homology	CDS	198782	199429	.	+	0	ID=cds-WP_001831502.1;Parent=gene-RM680_RS02255;Dbxref=GenBank:WP_001831502.1;Name=WP_001831502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501091.1;locus_tag=RM680_RS02255;product=HlyD family secretion protein;protein_id=WP_001831502.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	199442	201418	.	+	.	ID=gene-RM680_RS02260;Name=RM680_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02260;old_locus_tag=RM680_02260
NZ_JAVRJI010000002.1	Protein Homology	CDS	199442	201418	.	+	0	ID=cds-WP_001832918.1;Parent=gene-RM680_RS02260;Dbxref=GenBank:WP_001832918.1;Name=WP_001832918.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496257.1;locus_tag=RM680_RS02260;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_001832918.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	201598	202230	.	-	.	ID=gene-RM680_RS02265;Name=RM680_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02265;old_locus_tag=RM680_02265
NZ_JAVRJI010000002.1	Protein Homology	CDS	201598	202230	.	-	0	ID=cds-WP_001831566.1;Parent=gene-RM680_RS02265;Dbxref=GenBank:WP_001831566.1;Name=WP_001831566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502556.1;locus_tag=RM680_RS02265;product=hypothetical protein;protein_id=WP_001831566.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	202448	203347	.	+	.	ID=gene-RM680_RS02270;Name=RM680_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02270;old_locus_tag=RM680_02270
NZ_JAVRJI010000002.1	Protein Homology	CDS	202448	203347	.	+	0	ID=cds-WP_311563497.1;Parent=gene-RM680_RS02270;Dbxref=GenBank:WP_311563497.1;Name=WP_311563497.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500862.1;locus_tag=RM680_RS02270;product=alpha/beta hydrolase;protein_id=WP_311563497.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	203483	203872	.	-	.	ID=gene-RM680_RS02275;Name=RM680_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02275;old_locus_tag=RM680_02275
NZ_JAVRJI010000002.1	Protein Homology	CDS	203483	203872	.	-	0	ID=cds-WP_001831478.1;Parent=gene-RM680_RS02275;Dbxref=GenBank:WP_001831478.1;Name=WP_001831478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831478.1;locus_tag=RM680_RS02275;product=hypothetical protein;protein_id=WP_001831478.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	203875	204351	.	-	.	ID=gene-RM680_RS02280;Name=RM680_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02280;old_locus_tag=RM680_02280
NZ_JAVRJI010000002.1	Protein Homology	CDS	203875	204351	.	-	0	ID=cds-WP_002489319.1;Parent=gene-RM680_RS02280;Dbxref=GenBank:WP_002489319.1;Name=WP_002489319.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831539.1;locus_tag=RM680_RS02280;product=thioesterase family protein;protein_id=WP_002489319.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	204458	205405	.	+	.	ID=gene-RM680_RS02285;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=RM680_RS02285;old_locus_tag=RM680_02285
NZ_JAVRJI010000002.1	Protein Homology	CDS	204458	205405	.	+	0	ID=cds-WP_002489322.1;Parent=gene-RM680_RS02285;Dbxref=GenBank:WP_002489322.1;Name=WP_002489322.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447236.1;locus_tag=RM680_RS02285;product=magnesium/cobalt transporter CorA;protein_id=WP_002489322.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	205447	206496	.	+	.	ID=gene-RM680_RS02290;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=RM680_RS02290;old_locus_tag=RM680_02290
NZ_JAVRJI010000002.1	Protein Homology	CDS	205447	206496	.	+	0	ID=cds-WP_002495611.1;Parent=gene-RM680_RS02290;Dbxref=GenBank:WP_002495611.1;Name=WP_002495611.1;Ontology_term=GO:0008299,GO:0004452,GO:0010181;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA,FMN binding|0010181||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500866.1;locus_tag=RM680_RS02290;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WP_002495611.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	206650	207858	.	-	.	ID=gene-RM680_RS02295;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=RM680_RS02295;old_locus_tag=RM680_02295
NZ_JAVRJI010000002.1	Protein Homology	CDS	206650	207858	.	-	0	ID=cds-WP_001831403.1;Parent=gene-RM680_RS02295;Dbxref=GenBank:WP_001831403.1;Name=WP_001831403.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501083.1;locus_tag=RM680_RS02295;product=sodium/glutamate symporter;protein_id=WP_001831403.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	208167	208487	.	+	.	ID=gene-RM680_RS02300;Name=RM680_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02300;old_locus_tag=RM680_02300
NZ_JAVRJI010000002.1	Protein Homology	CDS	208167	208487	.	+	0	ID=cds-WP_001831459.1;Parent=gene-RM680_RS02300;Dbxref=GenBank:WP_001831459.1;Name=WP_001831459.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831459.1;locus_tag=RM680_RS02300;product=PadR family transcriptional regulator;protein_id=WP_001831459.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	208484	209044	.	+	.	ID=gene-RM680_RS02305;Name=RM680_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02305;old_locus_tag=RM680_02305
NZ_JAVRJI010000002.1	Protein Homology	CDS	208484	209044	.	+	0	ID=cds-WP_001831458.1;Parent=gene-RM680_RS02305;Dbxref=GenBank:WP_001831458.1;Name=WP_001831458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474436.1;locus_tag=RM680_RS02305;product=DUF1700 domain-containing protein;protein_id=WP_001831458.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	209041	209844	.	+	.	ID=gene-RM680_RS02310;Name=RM680_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02310;old_locus_tag=RM680_02310
NZ_JAVRJI010000002.1	Protein Homology	CDS	209041	209844	.	+	0	ID=cds-WP_001831626.1;Parent=gene-RM680_RS02310;Dbxref=GenBank:WP_001831626.1;Name=WP_001831626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438408.1;locus_tag=RM680_RS02310;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_001831626.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	209999	210607	.	-	.	ID=gene-RM680_RS02315;Name=RM680_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02315;old_locus_tag=RM680_02315
NZ_JAVRJI010000002.1	Protein Homology	CDS	209999	210607	.	-	0	ID=cds-WP_001831508.1;Parent=gene-RM680_RS02315;Dbxref=GenBank:WP_001831508.1;Name=WP_001831508.1;Ontology_term=GO:0006284,GO:0003677,GO:0003905;gbkey=CDS;go_function=DNA binding|0003677||IEA,alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501082.1;locus_tag=RM680_RS02315;product=DNA-3-methyladenine glycosylase;protein_id=WP_001831508.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	pseudogene	210813	211385	.	+	.	ID=gene-RM680_RS02320;Name=RM680_RS02320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS02320;old_locus_tag=RM680_02320;pseudo=true
NZ_JAVRJI010000002.1	Protein Homology	CDS	210813	211385	.	+	0	ID=cds-RM680_RS02320;Parent=gene-RM680_RS02320;Note=internal stop;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831467.1;locus_tag=RM680_RS02320;product=DUF805 domain-containing protein;pseudo=true;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	211957	213567	.	-	.	ID=gene-RM680_RS02325;Name=RM680_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02325;old_locus_tag=RM680_02330
NZ_JAVRJI010000002.1	Protein Homology	CDS	211957	213567	.	-	0	ID=cds-WP_002456635.1;Parent=gene-RM680_RS02325;Dbxref=GenBank:WP_002456635.1;Name=WP_002456635.1;Ontology_term=GO:0019569,GO:0005524,GO:0008741;gbkey=CDS;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=L-arabinose catabolic process to D-xylulose 5-phosphate|0019569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489308.1;locus_tag=RM680_RS02325;product=ribulokinase;protein_id=WP_002456635.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	214155	215165	.	+	.	ID=gene-RM680_RS02330;Name=RM680_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02330;old_locus_tag=RM680_02335
NZ_JAVRJI010000002.1	Protein Homology	CDS	214155	215165	.	+	0	ID=cds-WP_001831562.1;Parent=gene-RM680_RS02330;Dbxref=GenBank:WP_001831562.1;Name=WP_001831562.1;Ontology_term=GO:0005975,GO:0016857,GO:0030246;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498847.1;locus_tag=RM680_RS02330;product=aldose epimerase family protein;protein_id=WP_001831562.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	215238	215918	.	-	.	ID=gene-RM680_RS02335;Name=RM680_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02335;old_locus_tag=RM680_02340
NZ_JAVRJI010000002.1	Protein Homology	CDS	215238	215918	.	-	0	ID=cds-WP_001831436.1;Parent=gene-RM680_RS02335;Dbxref=GenBank:WP_001831436.1;Name=WP_001831436.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831436.1;locus_tag=RM680_RS02335;product=MOSC domain-containing protein;protein_id=WP_001831436.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	216084	216776	.	+	.	ID=gene-RM680_RS02340;Name=RM680_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02340;old_locus_tag=RM680_02345
NZ_JAVRJI010000002.1	Protein Homology	CDS	216084	216776	.	+	0	ID=cds-WP_001831586.1;Parent=gene-RM680_RS02340;Dbxref=GenBank:WP_001831586.1;Name=WP_001831586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474434.1;locus_tag=RM680_RS02340;product=ribose 5-phosphate isomerase A;protein_id=WP_001831586.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	217015	217200	.	-	.	ID=gene-RM680_RS02345;Name=RM680_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02345;old_locus_tag=RM680_02350
NZ_JAVRJI010000002.1	Protein Homology	CDS	217015	217200	.	-	0	ID=cds-WP_002438420.1;Parent=gene-RM680_RS02345;Dbxref=GenBank:WP_002438420.1;Name=WP_002438420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438420.1;locus_tag=RM680_RS02345;product=hypothetical protein;protein_id=WP_002438420.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	217178	217357	.	+	.	ID=gene-RM680_RS02350;Name=RM680_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02350;old_locus_tag=RM680_02355
NZ_JAVRJI010000002.1	Protein Homology	CDS	217178	217357	.	+	0	ID=cds-WP_001831484.1;Parent=gene-RM680_RS02350;Dbxref=GenBank:WP_001831484.1;Name=WP_001831484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500874.1;locus_tag=RM680_RS02350;product=hypothetical protein;protein_id=WP_001831484.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	217762	218910	.	-	.	ID=gene-RM680_RS02355;Name=RM680_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02355;old_locus_tag=RM680_02360
NZ_JAVRJI010000002.1	Protein Homology	CDS	217762	218910	.	-	0	ID=cds-WP_001831571.1;Parent=gene-RM680_RS02355;Dbxref=GenBank:WP_001831571.1;Name=WP_001831571.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503715.1;locus_tag=RM680_RS02355;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_001831571.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	219158	220093	.	+	.	ID=gene-RM680_RS02360;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=RM680_RS02360;old_locus_tag=RM680_02365
NZ_JAVRJI010000002.1	Protein Homology	CDS	219158	220093	.	+	0	ID=cds-WP_001831441.1;Parent=gene-RM680_RS02360;Dbxref=GenBank:WP_001831441.1;Name=WP_001831441.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499311.1;locus_tag=RM680_RS02360;product=formimidoylglutamase;protein_id=WP_001831441.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	220563	221681	.	+	.	ID=gene-RM680_RS02365;Name=RM680_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02365;old_locus_tag=RM680_02370
NZ_JAVRJI010000002.1	Protein Homology	CDS	220563	221681	.	+	0	ID=cds-WP_002500418.1;Parent=gene-RM680_RS02365;Dbxref=GenBank:WP_002500418.1;Name=WP_002500418.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496247.1;locus_tag=RM680_RS02365;product=amidohydrolase;protein_id=WP_002500418.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	221778	222659	.	+	.	ID=gene-RM680_RS02370;Name=RM680_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02370;old_locus_tag=RM680_02375
NZ_JAVRJI010000002.1	Protein Homology	CDS	221778	222659	.	+	0	ID=cds-WP_002456633.1;Parent=gene-RM680_RS02370;Dbxref=GenBank:WP_002456633.1;Name=WP_002456633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501065.1;locus_tag=RM680_RS02370;product=SDR family oxidoreductase;protein_id=WP_002456633.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	222946	223557	.	+	.	ID=gene-RM680_RS02375;Name=RM680_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02375;old_locus_tag=RM680_02380
NZ_JAVRJI010000002.1	Protein Homology	CDS	222946	223557	.	+	0	ID=cds-WP_002456632.1;Parent=gene-RM680_RS02375;Dbxref=GenBank:WP_002456632.1;Name=WP_002456632.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831602.1;locus_tag=RM680_RS02375;product=flavin reductase family protein;protein_id=WP_002456632.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	223601	224188	.	+	.	ID=gene-RM680_RS02380;Name=RM680_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02380;old_locus_tag=RM680_02385
NZ_JAVRJI010000002.1	Protein Homology	CDS	223601	224188	.	+	0	ID=cds-WP_002438426.1;Parent=gene-RM680_RS02380;Dbxref=GenBank:WP_002438426.1;Name=WP_002438426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438426.1;locus_tag=RM680_RS02380;product=hypothetical protein;protein_id=WP_002438426.1;transl_table=11
NZ_JAVRJI010000002.1	cmsearch	riboswitch	224264	224360	.	+	.	ID=id-NZ_JAVRJI010000002.1:224264..224360;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000002.1	RefSeq	gene	224494	225795	.	+	.	ID=gene-RM680_RS02385;Name=RM680_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02385;old_locus_tag=RM680_02390
NZ_JAVRJI010000002.1	Protein Homology	CDS	224494	225795	.	+	0	ID=cds-WP_001831611.1;Parent=gene-RM680_RS02385;Dbxref=GenBank:WP_001831611.1;Name=WP_001831611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464756.1;locus_tag=RM680_RS02385;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_001831611.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	226092	226604	.	+	.	ID=gene-RM680_RS02390;Name=RM680_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02390;old_locus_tag=RM680_02395
NZ_JAVRJI010000002.1	Protein Homology	CDS	226092	226604	.	+	0	ID=cds-WP_001831493.1;Parent=gene-RM680_RS02390;Dbxref=GenBank:WP_001831493.1;Name=WP_001831493.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457260.1;locus_tag=RM680_RS02390;product=SRPBCC family protein;protein_id=WP_001831493.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	226781	227542	.	-	.	ID=gene-RM680_RS02395;Name=RM680_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02395;old_locus_tag=RM680_02400
NZ_JAVRJI010000002.1	Protein Homology	CDS	226781	227542	.	-	0	ID=cds-WP_002438434.1;Parent=gene-RM680_RS02395;Dbxref=GenBank:WP_002438434.1;Name=WP_002438434.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362956.1;locus_tag=RM680_RS02395;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002438434.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	227740	229329	.	+	.	ID=gene-RM680_RS02400;Name=RM680_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02400;old_locus_tag=RM680_02405
NZ_JAVRJI010000002.1	Protein Homology	CDS	227740	229329	.	+	0	ID=cds-WP_002456961.1;Parent=gene-RM680_RS02400;Dbxref=GenBank:WP_002456961.1;Name=WP_002456961.1;Ontology_term=GO:0009401,GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457259.1;locus_tag=RM680_RS02400;product=alpha-glucoside-specific PTS transporter subunit IIBC;protein_id=WP_002456961.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	229434	229964	.	-	.	ID=gene-RM680_RS02405;Name=RM680_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02405;old_locus_tag=RM680_02410
NZ_JAVRJI010000002.1	Protein Homology	CDS	229434	229964	.	-	0	ID=cds-WP_001830032.1;Parent=gene-RM680_RS02405;Dbxref=GenBank:WP_001830032.1;Name=WP_001830032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447259.1;locus_tag=RM680_RS02405;product=hypothetical protein;protein_id=WP_001830032.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	230265	230900	.	+	.	ID=gene-RM680_RS02410;Name=RM680_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02410;old_locus_tag=RM680_02415
NZ_JAVRJI010000002.1	Protein Homology	CDS	230265	230900	.	+	0	ID=cds-WP_002484671.1;Parent=gene-RM680_RS02410;Dbxref=GenBank:WP_002484671.1;Name=WP_002484671.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496241.1;locus_tag=RM680_RS02410;product=HAD-IA family hydrolase;protein_id=WP_002484671.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	230918	231106	.	+	.	ID=gene-RM680_RS02415;Name=RM680_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02415;old_locus_tag=RM680_02420
NZ_JAVRJI010000002.1	Protein Homology	CDS	230918	231106	.	+	0	ID=cds-WP_002438441.1;Parent=gene-RM680_RS02415;Dbxref=GenBank:WP_002438441.1;Name=WP_002438441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438441.1;locus_tag=RM680_RS02415;product=hypothetical protein;protein_id=WP_002438441.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	231423	231608	.	-	.	ID=gene-RM680_RS02420;Name=RM680_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02420;old_locus_tag=RM680_02425
NZ_JAVRJI010000002.1	Protein Homology	CDS	231423	231608	.	-	0	ID=cds-WP_001830056.1;Parent=gene-RM680_RS02420;Dbxref=GenBank:WP_001830056.1;Name=WP_001830056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447263.1;locus_tag=RM680_RS02420;product=hypothetical protein;protein_id=WP_001830056.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	231605	231961	.	-	.	ID=gene-RM680_RS02425;Name=RM680_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02425;old_locus_tag=RM680_02430
NZ_JAVRJI010000002.1	Protein Homology	CDS	231605	231961	.	-	0	ID=cds-WP_002456963.1;Parent=gene-RM680_RS02425;Dbxref=GenBank:WP_002456963.1;Name=WP_002456963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464759.1;locus_tag=RM680_RS02425;product=hypothetical protein;protein_id=WP_002456963.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	232360	233736	.	+	.	ID=gene-RM680_RS02430;Name=RM680_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02430;old_locus_tag=RM680_02435
NZ_JAVRJI010000002.1	Protein Homology	CDS	232360	233736	.	+	0	ID=cds-WP_002456964.1;Parent=gene-RM680_RS02430;Dbxref=GenBank:WP_002456964.1;Name=WP_002456964.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457989.1;locus_tag=RM680_RS02430;product=amino acid permease;protein_id=WP_002456964.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	233859	234731	.	-	.	ID=gene-RM680_RS02435;Name=RM680_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02435;old_locus_tag=RM680_02440
NZ_JAVRJI010000002.1	Protein Homology	CDS	233859	234731	.	-	0	ID=cds-WP_001830051.1;Parent=gene-RM680_RS02435;Dbxref=GenBank:WP_001830051.1;Name=WP_001830051.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469323.1;locus_tag=RM680_RS02435;product=MurR/RpiR family transcriptional regulator;protein_id=WP_001830051.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	234745	236169	.	-	.	ID=gene-RM680_RS02440;Name=RM680_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02440;old_locus_tag=RM680_02445
NZ_JAVRJI010000002.1	Protein Homology	CDS	234745	236169	.	-	0	ID=cds-WP_001830059.1;Parent=gene-RM680_RS02440;Dbxref=GenBank:WP_001830059.1;Name=WP_001830059.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485941.1;locus_tag=RM680_RS02440;product=PTS transporter subunit EIIC;protein_id=WP_001830059.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	236182	237069	.	-	.	ID=gene-RM680_RS02445;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=RM680_RS02445;old_locus_tag=RM680_02450
NZ_JAVRJI010000002.1	Protein Homology	CDS	236182	237069	.	-	0	ID=cds-WP_002456966.1;Parent=gene-RM680_RS02445;Dbxref=GenBank:WP_002456966.1;Name=WP_002456966.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362960.1;locus_tag=RM680_RS02445;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002456966.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	237066	238118	.	-	.	ID=gene-RM680_RS02450;Name=RM680_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02450;old_locus_tag=RM680_02455
NZ_JAVRJI010000002.1	Protein Homology	CDS	237066	238118	.	-	0	ID=cds-WP_002500435.1;Parent=gene-RM680_RS02450;Dbxref=GenBank:WP_002500435.1;Name=WP_002500435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474466.1;locus_tag=RM680_RS02450;product=MupG family TIM beta-alpha barrel fold protein;protein_id=WP_002500435.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	238298	238633	.	-	.	ID=gene-RM680_RS02455;Name=RM680_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02455;old_locus_tag=RM680_02460
NZ_JAVRJI010000002.1	Protein Homology	CDS	238298	238633	.	-	0	ID=cds-WP_002469322.1;Parent=gene-RM680_RS02455;Dbxref=GenBank:WP_002469322.1;Name=WP_002469322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457986.1;locus_tag=RM680_RS02455;product=hypothetical protein;protein_id=WP_002469322.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	238685	239431	.	+	.	ID=gene-RM680_RS02460;Name=RM680_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02460;old_locus_tag=RM680_02465
NZ_JAVRJI010000002.1	Protein Homology	CDS	238685	239431	.	+	0	ID=cds-WP_002468207.1;Parent=gene-RM680_RS02460;Dbxref=GenBank:WP_002468207.1;Name=WP_002468207.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366626.1;locus_tag=RM680_RS02460;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_002468207.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	239610	240299	.	-	.	ID=gene-RM680_RS02465;Name=RM680_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02465;old_locus_tag=RM680_02470
NZ_JAVRJI010000002.1	Protein Homology	CDS	239610	240299	.	-	0	ID=cds-WP_001830039.1;Parent=gene-RM680_RS02465;Dbxref=GenBank:WP_001830039.1;Name=WP_001830039.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490791.1;locus_tag=RM680_RS02465;product=helix-turn-helix transcriptional regulator;protein_id=WP_001830039.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	240728	241543	.	+	.	ID=gene-RM680_RS02470;Name=RM680_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02470;old_locus_tag=RM680_02475
NZ_JAVRJI010000002.1	Protein Homology	CDS	240728	241543	.	+	0	ID=cds-WP_001830034.1;Parent=gene-RM680_RS02470;Dbxref=GenBank:WP_001830034.1;Name=WP_001830034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477135.1;locus_tag=RM680_RS02470;product=inositol monophosphatase family protein;protein_id=WP_001830034.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	241732	242682	.	+	.	ID=gene-RM680_RS02475;Name=RM680_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02475;old_locus_tag=RM680_02480
NZ_JAVRJI010000002.1	Protein Homology	CDS	241732	242682	.	+	0	ID=cds-WP_001830043.1;Parent=gene-RM680_RS02475;Dbxref=GenBank:WP_001830043.1;Name=WP_001830043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832630.1;locus_tag=RM680_RS02475;product=LCP family glycopolymer transferase;protein_id=WP_001830043.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	243316	243591	.	+	.	ID=gene-RM680_RS02480;Name=RM680_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02480;old_locus_tag=RM680_02485
NZ_JAVRJI010000002.1	Protein Homology	CDS	243316	243591	.	+	0	ID=cds-WP_001830049.1;Parent=gene-RM680_RS02480;Dbxref=GenBank:WP_001830049.1;Name=WP_001830049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496354.1;locus_tag=RM680_RS02480;product=hypothetical protein;protein_id=WP_001830049.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	243613	244389	.	+	.	ID=gene-RM680_RS02485;Name=RM680_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02485;old_locus_tag=RM680_02490
NZ_JAVRJI010000002.1	Protein Homology	CDS	243613	244389	.	+	0	ID=cds-WP_001832638.1;Parent=gene-RM680_RS02485;Dbxref=GenBank:WP_001832638.1;Name=WP_001832638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457979.1;locus_tag=RM680_RS02485;product=N-acetylglucosaminidase;protein_id=WP_001832638.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	244772	245896	.	+	.	ID=gene-RM680_RS02490;Name=RM680_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02490;old_locus_tag=RM680_02495
NZ_JAVRJI010000002.1	Protein Homology	CDS	244772	245896	.	+	0	ID=cds-WP_001830037.1;Parent=gene-RM680_RS02490;Dbxref=GenBank:WP_001830037.1;Name=WP_001830037.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362965.1;locus_tag=RM680_RS02490;product=FAD-dependent monooxygenase;protein_id=WP_001830037.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	246037	246990	.	-	.	ID=gene-RM680_RS02495;Name=RM680_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02495;old_locus_tag=RM680_02500
NZ_JAVRJI010000002.1	Protein Homology	CDS	246037	246990	.	-	0	ID=cds-WP_001832639.1;Parent=gene-RM680_RS02495;Dbxref=GenBank:WP_001832639.1;Name=WP_001832639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501039.1;locus_tag=RM680_RS02495;product=2-hydroxyacid dehydrogenase family protein;protein_id=WP_001832639.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	247068	247385	.	-	.	ID=gene-RM680_RS02500;Name=RM680_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02500;old_locus_tag=RM680_02505
NZ_JAVRJI010000002.1	Protein Homology	CDS	247068	247385	.	-	0	ID=cds-WP_001830046.1;Parent=gene-RM680_RS02500;Dbxref=GenBank:WP_001830046.1;Name=WP_001830046.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362966.1;locus_tag=RM680_RS02500;product=DMT family transporter;protein_id=WP_001830046.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	247391	247717	.	-	.	ID=gene-RM680_RS02505;Name=RM680_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02505;old_locus_tag=RM680_02510
NZ_JAVRJI010000002.1	Protein Homology	CDS	247391	247717	.	-	0	ID=cds-WP_001830041.1;Parent=gene-RM680_RS02505;Dbxref=GenBank:WP_001830041.1;Name=WP_001830041.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493530.1;locus_tag=RM680_RS02505;product=DMT family transporter;protein_id=WP_001830041.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	247870	248343	.	-	.	ID=gene-RM680_RS02510;Name=RM680_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02510;old_locus_tag=RM680_02515
NZ_JAVRJI010000002.1	Protein Homology	CDS	247870	248343	.	-	0	ID=cds-WP_002495623.1;Parent=gene-RM680_RS02510;Dbxref=GenBank:WP_002495623.1;Name=WP_002495623.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496352.1;locus_tag=RM680_RS02510;product=CHAP domain-containing protein;protein_id=WP_002495623.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	248665	249159	.	-	.	ID=gene-RM680_RS02515;Name=RM680_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02515;old_locus_tag=RM680_02520
NZ_JAVRJI010000002.1	Protein Homology	CDS	248665	249159	.	-	0	ID=cds-WP_001830040.1;Parent=gene-RM680_RS02515;Dbxref=GenBank:WP_001830040.1;Name=WP_001830040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012087248.1;locus_tag=RM680_RS02515;product=DUF4870 domain-containing protein;protein_id=WP_001830040.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	249541	250611	.	+	.	ID=gene-RM680_RS02520;Name=RM680_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02520;old_locus_tag=RM680_02525
NZ_JAVRJI010000002.1	Protein Homology	CDS	249541	250611	.	+	0	ID=cds-WP_001830031.1;Parent=gene-RM680_RS02520;Dbxref=GenBank:WP_001830031.1;Name=WP_001830031.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830031.1;locus_tag=RM680_RS02520;product=NAD/NADP-dependent octopine/nopaline dehydrogenase family protein;protein_id=WP_001830031.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	gene	250676	252073	.	+	.	ID=gene-RM680_RS02525;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=RM680_RS02525;old_locus_tag=RM680_02530
NZ_JAVRJI010000002.1	Protein Homology	CDS	250676	252073	.	+	0	ID=cds-WP_001832636.1;Parent=gene-RM680_RS02525;Dbxref=GenBank:WP_001832636.1;Name=WP_001832636.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832636.1;locus_tag=RM680_RS02525;product=Na+/H+ antiporter NhaC;protein_id=WP_001832636.1;transl_table=11
NZ_JAVRJI010000002.1	RefSeq	pseudogene	252522	252629	.	-	.	ID=gene-RM680_RS02530;Name=RM680_RS02530;end_range=252629,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS02530;old_locus_tag=RM680_02535;partial=true;pseudo=true
NZ_JAVRJI010000002.1	Protein Homology	CDS	252522	252629	.	-	0	ID=cds-RM680_RS02530;Parent=gene-RM680_RS02530;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=252629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501337.1;locus_tag=RM680_RS02530;partial=true;product=CHAP domain-containing protein;pseudo=true;transl_table=11
##sequence-region NZ_JAVRJI010000003.1 1 251776
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000003.1	RefSeq	region	1	251776	.	+	.	ID=NZ_JAVRJI010000003.1:1..251776;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000003.1	RefSeq	pseudogene	131	799	.	-	.	ID=gene-RM680_RS12040;Name=RM680_RS12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS12040;old_locus_tag=RM680_02540;pseudo=true
NZ_JAVRJI010000003.1	Protein Homology	CDS	131	799	.	-	0	ID=cds-RM680_RS12040;Parent=gene-RM680_RS12040;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494449.1;locus_tag=RM680_RS12040;product=transposase;pseudo=true;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	1096	2223	.	-	.	ID=gene-RM680_RS02540;Name=RM680_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02540;old_locus_tag=RM680_02545
NZ_JAVRJI010000003.1	Protein Homology	CDS	1096	2223	.	-	0	ID=cds-WP_311563499.1;Parent=gene-RM680_RS02540;Dbxref=GenBank:WP_311563499.1;Name=WP_311563499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499446.1;locus_tag=RM680_RS02540;product=NADH-dependent flavin oxidoreductase;protein_id=WP_311563499.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	2544	2924	.	-	.	ID=gene-RM680_RS02545;Name=ygs;gbkey=Gene;gene=ygs;gene_biotype=protein_coding;locus_tag=RM680_RS02545;old_locus_tag=RM680_02550
NZ_JAVRJI010000003.1	Protein Homology	CDS	2544	2924	.	-	0	ID=cds-WP_001831918.1;Parent=gene-RM680_RS02545;Dbxref=GenBank:WP_001831918.1;Name=WP_001831918.1;gbkey=CDS;gene=ygs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831918.1;locus_tag=RM680_RS02545;product=S1 domain-containing post-transcriptional regulator Ygs;protein_id=WP_001831918.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	3221	3814	.	-	.	ID=gene-RM680_RS02550;Name=RM680_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02550;old_locus_tag=RM680_02555
NZ_JAVRJI010000003.1	Protein Homology	CDS	3221	3814	.	-	0	ID=cds-WP_001831922.1;Parent=gene-RM680_RS02550;Dbxref=GenBank:WP_001831922.1;Name=WP_001831922.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499444.1;locus_tag=RM680_RS02550;product=peptidylprolyl isomerase;protein_id=WP_001831922.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	3880	4260	.	+	.	ID=gene-RM680_RS02555;Name=RM680_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02555;old_locus_tag=RM680_02560
NZ_JAVRJI010000003.1	Protein Homology	CDS	3880	4260	.	+	0	ID=cds-WP_002489866.1;Parent=gene-RM680_RS02555;Dbxref=GenBank:WP_002489866.1;Name=WP_002489866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831990.1;locus_tag=RM680_RS02555;product=kinase-associated lipoprotein B;protein_id=WP_002489866.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	4454	6859	.	+	.	ID=gene-RM680_RS02560;Name=RM680_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02560;old_locus_tag=RM680_02565
NZ_JAVRJI010000003.1	Protein Homology	CDS	4454	6859	.	+	0	ID=cds-WP_001832516.1;Parent=gene-RM680_RS02560;Dbxref=GenBank:WP_001832516.1;Name=WP_001832516.1;Ontology_term=GO:0098662,GO:0051139;gbkey=CDS;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499442.1;locus_tag=RM680_RS02560;product=Na+/H+ antiporter subunit A;protein_id=WP_001832516.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	6852	7280	.	+	.	ID=gene-RM680_RS02565;Name=mnhB1;gbkey=Gene;gene=mnhB1;gene_biotype=protein_coding;locus_tag=RM680_RS02565;old_locus_tag=RM680_02570
NZ_JAVRJI010000003.1	Protein Homology	CDS	6852	7280	.	+	0	ID=cds-WP_001831999.1;Parent=gene-RM680_RS02565;Dbxref=GenBank:WP_001831999.1;Name=WP_001831999.1;gbkey=CDS;gene=mnhB1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499441.1;locus_tag=RM680_RS02565;product=Na+/H+ antiporter Mnh1 subunit B;protein_id=WP_001831999.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	7280	7627	.	+	.	ID=gene-RM680_RS02570;Name=mnhC1;gbkey=Gene;gene=mnhC1;gene_biotype=protein_coding;locus_tag=RM680_RS02570;old_locus_tag=RM680_02575
NZ_JAVRJI010000003.1	Protein Homology	CDS	7280	7627	.	+	0	ID=cds-WP_001831949.1;Parent=gene-RM680_RS02570;Dbxref=GenBank:WP_001831949.1;Name=WP_001831949.1;gbkey=CDS;gene=mnhC1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441784.1;locus_tag=RM680_RS02570;product=Na+/H+ antiporter Mnh1 subunit C;protein_id=WP_001831949.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	7614	9110	.	+	.	ID=gene-RM680_RS02575;Name=mnhD1;gbkey=Gene;gene=mnhD1;gene_biotype=protein_coding;locus_tag=RM680_RS02575;old_locus_tag=RM680_02580
NZ_JAVRJI010000003.1	Protein Homology	CDS	7614	9110	.	+	0	ID=cds-WP_001831894.1;Parent=gene-RM680_RS02575;Dbxref=GenBank:WP_001831894.1;Name=WP_001831894.1;gbkey=CDS;gene=mnhD1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499439.1;locus_tag=RM680_RS02575;product=Na+/H+ antiporter Mnh1 subunit D;protein_id=WP_001831894.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	9112	9591	.	+	.	ID=gene-RM680_RS02580;Name=RM680_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02580;old_locus_tag=RM680_02585
NZ_JAVRJI010000003.1	Protein Homology	CDS	9112	9591	.	+	0	ID=cds-WP_001831972.1;Parent=gene-RM680_RS02580;Dbxref=GenBank:WP_001831972.1;Name=WP_001831972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457195.1;locus_tag=RM680_RS02580;product=Na+/H+ antiporter subunit E;protein_id=WP_001831972.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	9591	9884	.	+	.	ID=gene-RM680_RS02585;Name=mnhF1;gbkey=Gene;gene=mnhF1;gene_biotype=protein_coding;locus_tag=RM680_RS02585;old_locus_tag=RM680_02590
NZ_JAVRJI010000003.1	Protein Homology	CDS	9591	9884	.	+	0	ID=cds-WP_001831940.1;Parent=gene-RM680_RS02585;Dbxref=GenBank:WP_001831940.1;Name=WP_001831940.1;gbkey=CDS;gene=mnhF1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831940.1;locus_tag=RM680_RS02585;product=Na+/H+ antiporter Mnh1 subunit F;protein_id=WP_001831940.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	9862	10218	.	+	.	ID=gene-RM680_RS02590;Name=mnhG1;gbkey=Gene;gene=mnhG1;gene_biotype=protein_coding;locus_tag=RM680_RS02590;old_locus_tag=RM680_02595
NZ_JAVRJI010000003.1	Protein Homology	CDS	9862	10218	.	+	0	ID=cds-WP_001831900.1;Parent=gene-RM680_RS02590;Dbxref=GenBank:WP_001831900.1;Name=WP_001831900.1;gbkey=CDS;gene=mnhG1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475041.1;locus_tag=RM680_RS02590;product=Na+/H+ antiporter Mnh1 subunit G;protein_id=WP_001831900.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	10523	11677	.	+	.	ID=gene-RM680_RS02595;Name=RM680_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02595;old_locus_tag=RM680_02600
NZ_JAVRJI010000003.1	Protein Homology	CDS	10523	11677	.	+	0	ID=cds-WP_002497566.1;Parent=gene-RM680_RS02595;Dbxref=GenBank:WP_002497566.1;Name=WP_002497566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464942.1;locus_tag=RM680_RS02595;product=NAD(P)-binding domain-containing protein;protein_id=WP_002497566.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	11736	12110	.	-	.	ID=gene-RM680_RS02600;Name=RM680_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02600;old_locus_tag=RM680_02605
NZ_JAVRJI010000003.1	Protein Homology	CDS	11736	12110	.	-	0	ID=cds-WP_001831899.1;Parent=gene-RM680_RS02600;Dbxref=GenBank:WP_001831899.1;Name=WP_001831899.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831899.1;locus_tag=RM680_RS02600;product=hotdog fold thioesterase;protein_id=WP_001831899.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	12133	13449	.	-	.	ID=gene-RM680_RS02605;Name=RM680_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02605;old_locus_tag=RM680_02610
NZ_JAVRJI010000003.1	Protein Homology	CDS	12133	13449	.	-	0	ID=cds-WP_002439048.1;Parent=gene-RM680_RS02605;Dbxref=GenBank:WP_002439048.1;Name=WP_002439048.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499433.1;locus_tag=RM680_RS02605;product=Na+/H+ antiporter family protein;protein_id=WP_002439048.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	13635	15116	.	-	.	ID=gene-RM680_RS02610;Name=RM680_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02610;old_locus_tag=RM680_02615
NZ_JAVRJI010000003.1	Protein Homology	CDS	13635	15116	.	-	0	ID=cds-WP_002439046.1;Parent=gene-RM680_RS02610;Dbxref=GenBank:WP_002439046.1;Name=WP_002439046.1;Ontology_term=GO:0006508,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470494.1;locus_tag=RM680_RS02610;product=M17 family metallopeptidase;protein_id=WP_002439046.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	15436	16644	.	-	.	ID=gene-RM680_RS02615;Name=RM680_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02615;old_locus_tag=RM680_02620
NZ_JAVRJI010000003.1	Protein Homology	CDS	15436	16644	.	-	0	ID=cds-WP_001831966.1;Parent=gene-RM680_RS02615;Dbxref=GenBank:WP_001831966.1;Name=WP_001831966.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499431.1;locus_tag=RM680_RS02615;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001831966.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	16914	17273	.	-	.	ID=gene-RM680_RS02620;Name=RM680_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02620;old_locus_tag=RM680_02625
NZ_JAVRJI010000003.1	Protein Homology	CDS	16914	17273	.	-	0	ID=cds-WP_001832002.1;Parent=gene-RM680_RS02620;Dbxref=GenBank:WP_001832002.1;Name=WP_001832002.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499430.1;locus_tag=RM680_RS02620;product=HesB/IscA family protein;protein_id=WP_001832002.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	17303	17548	.	-	.	ID=gene-RM680_RS02625;Name=RM680_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02625;old_locus_tag=RM680_02630
NZ_JAVRJI010000003.1	Protein Homology	CDS	17303	17548	.	-	0	ID=cds-WP_001831896.1;Parent=gene-RM680_RS02625;Dbxref=GenBank:WP_001831896.1;Name=WP_001831896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831896.1;locus_tag=RM680_RS02625;product=YuzB family protein;protein_id=WP_001831896.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	17830	18894	.	+	.	ID=gene-RM680_RS02630;Name=RM680_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02630;old_locus_tag=RM680_02635
NZ_JAVRJI010000003.1	Protein Homology	CDS	17830	18894	.	+	0	ID=cds-WP_002439040.1;Parent=gene-RM680_RS02630;Dbxref=GenBank:WP_002439040.1;Name=WP_002439040.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499428.1;locus_tag=RM680_RS02630;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_002439040.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	19085	19405	.	-	.	ID=gene-RM680_RS02635;Name=RM680_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02635;old_locus_tag=RM680_02640
NZ_JAVRJI010000003.1	Protein Homology	CDS	19085	19405	.	-	0	ID=cds-WP_001831951.1;Parent=gene-RM680_RS02635;Dbxref=GenBank:WP_001831951.1;Name=WP_001831951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831951.1;locus_tag=RM680_RS02635;product=YuzD family protein;protein_id=WP_001831951.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	19505	19747	.	+	.	ID=gene-RM680_RS02640;Name=RM680_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02640;old_locus_tag=RM680_02645
NZ_JAVRJI010000003.1	Protein Homology	CDS	19505	19747	.	+	0	ID=cds-WP_001831958.1;Parent=gene-RM680_RS02640;Dbxref=GenBank:WP_001831958.1;Name=WP_001831958.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499426.1;locus_tag=RM680_RS02640;product=NifU family protein;protein_id=WP_001831958.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	20045	21283	.	-	.	ID=gene-RM680_RS02645;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=RM680_RS02645;old_locus_tag=RM680_02650
NZ_JAVRJI010000003.1	Protein Homology	CDS	20045	21283	.	-	0	ID=cds-WP_001831904.1;Parent=gene-RM680_RS02645;Dbxref=GenBank:WP_001831904.1;Name=WP_001831904.1;Ontology_term=GO:0070394;gbkey=CDS;gene=dltD;go_process=lipoteichoic acid metabolic process|0070394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446031.1;locus_tag=RM680_RS02645;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WP_001831904.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	21280	21516	.	-	.	ID=gene-RM680_RS02650;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=RM680_RS02650;old_locus_tag=RM680_02655
NZ_JAVRJI010000003.1	Protein Homology	CDS	21280	21516	.	-	0	ID=cds-WP_001831996.1;Parent=gene-RM680_RS02650;Dbxref=GenBank:WP_001831996.1;Name=WP_001831996.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433359.1;locus_tag=RM680_RS02650;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=WP_001831996.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	21534	22748	.	-	.	ID=gene-RM680_RS02655;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=RM680_RS02655;old_locus_tag=RM680_02660
NZ_JAVRJI010000003.1	Protein Homology	CDS	21534	22748	.	-	0	ID=cds-WP_002439035.1;Parent=gene-RM680_RS02655;Dbxref=GenBank:WP_002439035.1;Name=WP_002439035.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499423.1;locus_tag=RM680_RS02655;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WP_002439035.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	22745	24202	.	-	.	ID=gene-RM680_RS02660;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=RM680_RS02660;old_locus_tag=RM680_02665
NZ_JAVRJI010000003.1	Protein Homology	CDS	22745	24202	.	-	0	ID=cds-WP_001831977.1;Parent=gene-RM680_RS02660;Dbxref=GenBank:WP_001831977.1;Name=WP_001831977.1;Ontology_term=GO:0019350,GO:0005524,GO:0047473;gbkey=CDS;gene=dltA;go_function=ATP binding|0005524||IEA,D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499422.1;locus_tag=RM680_RS02660;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WP_001831977.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	24218	24364	.	-	.	ID=gene-RM680_RS02665;Name=RM680_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02665;old_locus_tag=RM680_02670
NZ_JAVRJI010000003.1	Protein Homology	CDS	24218	24364	.	-	0	ID=cds-WP_001831913.1;Parent=gene-RM680_RS02665;Dbxref=GenBank:WP_001831913.1;Name=WP_001831913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831913.1;locus_tag=RM680_RS02665;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WP_001831913.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	24769	25740	.	-	.	ID=gene-RM680_RS02670;Name=RM680_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02670;old_locus_tag=RM680_02675
NZ_JAVRJI010000003.1	Protein Homology	CDS	24769	25740	.	-	0	ID=cds-WP_002497564.1;Parent=gene-RM680_RS02670;Dbxref=GenBank:WP_002497564.1;Name=WP_002497564.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831897.1;locus_tag=RM680_RS02670;product=2-hydroxyacid dehydrogenase;protein_id=WP_002497564.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	25782	26561	.	-	.	ID=gene-RM680_RS02675;Name=RM680_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02675;old_locus_tag=RM680_02680
NZ_JAVRJI010000003.1	Protein Homology	CDS	25782	26561	.	-	0	ID=cds-WP_002497563.1;Parent=gene-RM680_RS02675;Dbxref=GenBank:WP_002497563.1;Name=WP_002497563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499418.1;locus_tag=RM680_RS02675;product=TIGR01457 family HAD-type hydrolase;protein_id=WP_002497563.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	26561	26995	.	-	.	ID=gene-RM680_RS02680;Name=RM680_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02680;old_locus_tag=RM680_02685
NZ_JAVRJI010000003.1	Protein Homology	CDS	26561	26995	.	-	0	ID=cds-WP_001831932.1;Parent=gene-RM680_RS02680;Dbxref=GenBank:WP_001831932.1;Name=WP_001831932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831932.1;locus_tag=RM680_RS02680;product=DUF86 domain-containing protein;protein_id=WP_001831932.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	27114	27380	.	+	.	ID=gene-RM680_RS02685;Name=RM680_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02685;old_locus_tag=RM680_02690
NZ_JAVRJI010000003.1	Protein Homology	CDS	27114	27380	.	+	0	ID=cds-WP_002439025.1;Parent=gene-RM680_RS02685;Dbxref=GenBank:WP_002439025.1;Name=WP_002439025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831957.1;locus_tag=RM680_RS02685;product=DUF3055 domain-containing protein;protein_id=WP_002439025.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	27440	27829	.	-	.	ID=gene-RM680_RS02690;Name=RM680_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02690;old_locus_tag=RM680_02695
NZ_JAVRJI010000003.1	Protein Homology	CDS	27440	27829	.	-	0	ID=cds-WP_001831895.1;Parent=gene-RM680_RS02690;Dbxref=GenBank:WP_001831895.1;Name=WP_001831895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446025.1;locus_tag=RM680_RS02690;product=YutD family protein;protein_id=WP_001831895.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	28016	28930	.	-	.	ID=gene-RM680_RS02695;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=RM680_RS02695;old_locus_tag=RM680_02700
NZ_JAVRJI010000003.1	Protein Homology	CDS	28016	28930	.	-	0	ID=cds-WP_001831979.1;Parent=gene-RM680_RS02695;Dbxref=GenBank:WP_001831979.1;Name=WP_001831979.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497137.1;locus_tag=RM680_RS02695;product=lipoyl synthase;protein_id=WP_001831979.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	29019	30338	.	-	.	ID=gene-RM680_RS02700;Name=RM680_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02700;old_locus_tag=RM680_02705
NZ_JAVRJI010000003.1	Protein Homology	CDS	29019	30338	.	-	0	ID=cds-WP_002439019.1;Parent=gene-RM680_RS02700;Dbxref=GenBank:WP_002439019.1;Name=WP_002439019.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476492.1;locus_tag=RM680_RS02700;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_002439019.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	30424	31251	.	-	.	ID=gene-RM680_RS02705;Name=RM680_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02705;old_locus_tag=RM680_02710
NZ_JAVRJI010000003.1	Protein Homology	CDS	30424	31251	.	-	0	ID=cds-WP_002456119.1;Parent=gene-RM680_RS02705;Dbxref=GenBank:WP_002456119.1;Name=WP_002456119.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499412.1;locus_tag=RM680_RS02705;product=sulfite exporter TauE/SafE family protein;protein_id=WP_002456119.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	31264	32112	.	-	.	ID=gene-RM680_RS02710;Name=RM680_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02710;old_locus_tag=RM680_02715
NZ_JAVRJI010000003.1	Protein Homology	CDS	31264	32112	.	-	0	ID=cds-WP_002497562.1;Parent=gene-RM680_RS02710;Dbxref=GenBank:WP_002497562.1;Name=WP_002497562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499411.1;locus_tag=RM680_RS02710;product=DUF72 domain-containing protein;protein_id=WP_002497562.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	32479	33504	.	-	.	ID=gene-RM680_RS02715;Name=RM680_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02715;old_locus_tag=RM680_02720
NZ_JAVRJI010000003.1	Protein Homology	CDS	32479	33504	.	-	0	ID=cds-WP_002494698.1;Parent=gene-RM680_RS02715;Dbxref=GenBank:WP_002494698.1;Name=WP_002494698.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439013.1;locus_tag=RM680_RS02715;product=hemolysin family protein;protein_id=WP_002494698.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	34007	34360	.	-	.	ID=gene-RM680_RS02720;Name=RM680_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02720;old_locus_tag=RM680_02725
NZ_JAVRJI010000003.1	Protein Homology	CDS	34007	34360	.	-	0	ID=cds-WP_002495357.1;Parent=gene-RM680_RS02720;Dbxref=GenBank:WP_002495357.1;Name=WP_002495357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834554.1;locus_tag=RM680_RS02720;product=hypothetical protein;protein_id=WP_002495357.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	34351	34497	.	-	.	ID=gene-RM680_RS02725;Name=RM680_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02725;old_locus_tag=RM680_02730
NZ_JAVRJI010000003.1	Protein Homology	CDS	34351	34497	.	-	0	ID=cds-WP_001831994.1;Parent=gene-RM680_RS02725;Dbxref=GenBank:WP_001831994.1;Name=WP_001831994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831994.1;locus_tag=RM680_RS02725;product=hypothetical protein;protein_id=WP_001831994.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	34827	36224	.	-	.	ID=gene-RM680_RS02730;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=RM680_RS02730;old_locus_tag=RM680_02735
NZ_JAVRJI010000003.1	Protein Homology	CDS	34827	36224	.	-	0	ID=cds-WP_001831980.1;Parent=gene-RM680_RS02730;Dbxref=GenBank:WP_001831980.1;Name=WP_001831980.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469760.1;locus_tag=RM680_RS02730;product=Fe-S cluster assembly protein SufB;protein_id=WP_001831980.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	36430	36894	.	-	.	ID=gene-RM680_RS02735;Name=sufU;gbkey=Gene;gene=sufU;gene_biotype=protein_coding;locus_tag=RM680_RS02735;old_locus_tag=RM680_02740
NZ_JAVRJI010000003.1	Protein Homology	CDS	36430	36894	.	-	0	ID=cds-WP_001831954.1;Parent=gene-RM680_RS02735;Dbxref=GenBank:WP_001831954.1;Name=WP_001831954.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499404.1;locus_tag=RM680_RS02735;product=Fe-S cluster assembly sulfur transfer protein SufU;protein_id=WP_001831954.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	36884	38125	.	-	.	ID=gene-RM680_RS02740;Name=RM680_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02740;old_locus_tag=RM680_02745
NZ_JAVRJI010000003.1	Protein Homology	CDS	36884	38125	.	-	0	ID=cds-WP_002468879.1;Parent=gene-RM680_RS02740;Dbxref=GenBank:WP_002468879.1;Name=WP_002468879.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020359689.1;locus_tag=RM680_RS02740;product=cysteine desulfurase;protein_id=WP_002468879.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	38193	39500	.	-	.	ID=gene-RM680_RS02745;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=RM680_RS02745;old_locus_tag=RM680_02750
NZ_JAVRJI010000003.1	Protein Homology	CDS	38193	39500	.	-	0	ID=cds-WP_001831898.1;Parent=gene-RM680_RS02745;Dbxref=GenBank:WP_001831898.1;Name=WP_001831898.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499402.1;locus_tag=RM680_RS02745;product=Fe-S cluster assembly protein SufD;protein_id=WP_001831898.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	39595	40356	.	-	.	ID=gene-RM680_RS02750;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=RM680_RS02750;old_locus_tag=RM680_02755
NZ_JAVRJI010000003.1	Protein Homology	CDS	39595	40356	.	-	0	ID=cds-WP_001831944.1;Parent=gene-RM680_RS02750;Dbxref=GenBank:WP_001831944.1;Name=WP_001831944.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499401.1;locus_tag=RM680_RS02750;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_001831944.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	40678	41538	.	+	.	ID=gene-RM680_RS02755;Name=RM680_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02755;old_locus_tag=RM680_02760
NZ_JAVRJI010000003.1	Protein Homology	CDS	40678	41538	.	+	0	ID=cds-WP_001831939.1;Parent=gene-RM680_RS02755;Dbxref=GenBank:WP_001831939.1;Name=WP_001831939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446015.1;locus_tag=RM680_RS02755;product=DUF368 domain-containing protein;protein_id=WP_001831939.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	41604	41795	.	-	.	ID=gene-RM680_RS02760;Name=RM680_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02760;old_locus_tag=RM680_02765
NZ_JAVRJI010000003.1	Protein Homology	CDS	41604	41795	.	-	0	ID=cds-WP_001831967.1;Parent=gene-RM680_RS02760;Dbxref=GenBank:WP_001831967.1;Name=WP_001831967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831967.1;locus_tag=RM680_RS02760;product=CsbD family protein;protein_id=WP_001831967.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	41970	42128	.	+	.	ID=gene-RM680_RS02765;Name=RM680_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02765;old_locus_tag=RM680_02770
NZ_JAVRJI010000003.1	Protein Homology	CDS	41970	42128	.	+	0	ID=cds-WP_001831893.1;Parent=gene-RM680_RS02765;Dbxref=GenBank:WP_001831893.1;Name=WP_001831893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470501.1;locus_tag=RM680_RS02765;product=hypothetical protein;protein_id=WP_001831893.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	42398	43210	.	-	.	ID=gene-RM680_RS02770;Name=RM680_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02770;old_locus_tag=RM680_02775
NZ_JAVRJI010000003.1	Protein Homology	CDS	42398	43210	.	-	0	ID=cds-WP_002438990.1;Parent=gene-RM680_RS02770;Dbxref=GenBank:WP_002438990.1;Name=WP_002438990.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499398.1;locus_tag=RM680_RS02770;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_002438990.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	43231	43926	.	-	.	ID=gene-RM680_RS02775;Name=RM680_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02775;old_locus_tag=RM680_02780
NZ_JAVRJI010000003.1	Protein Homology	CDS	43231	43926	.	-	0	ID=cds-WP_002497561.1;Parent=gene-RM680_RS02775;Dbxref=GenBank:WP_002497561.1;Name=WP_002497561.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499397.1;locus_tag=RM680_RS02775;product=methionine ABC transporter permease;protein_id=WP_002497561.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	43919	44944	.	-	.	ID=gene-RM680_RS02780;Name=RM680_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02780;old_locus_tag=RM680_02785
NZ_JAVRJI010000003.1	Protein Homology	CDS	43919	44944	.	-	0	ID=cds-WP_001831992.1;Parent=gene-RM680_RS02780;Dbxref=GenBank:WP_001831992.1;Name=WP_001831992.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276311.1;locus_tag=RM680_RS02780;product=methionine ABC transporter ATP-binding protein;protein_id=WP_001831992.1;transl_table=11
NZ_JAVRJI010000003.1	cmsearch	riboswitch	45038	45140	.	-	.	ID=id-NZ_JAVRJI010000003.1:45038..45140;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000003.1	RefSeq	gene	45197	45493	.	-	.	ID=gene-RM680_RS02785;Name=RM680_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02785;old_locus_tag=RM680_02790
NZ_JAVRJI010000003.1	Protein Homology	CDS	45197	45493	.	-	0	ID=cds-WP_001831936.1;Parent=gene-RM680_RS02785;Dbxref=GenBank:WP_001831936.1;Name=WP_001831936.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446011.1;locus_tag=RM680_RS02785;product=thioredoxin family protein;protein_id=WP_001831936.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	45486	45872	.	-	.	ID=gene-RM680_RS02790;Name=RM680_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02790;old_locus_tag=RM680_02795
NZ_JAVRJI010000003.1	Protein Homology	CDS	45486	45872	.	-	0	ID=cds-WP_001831968.1;Parent=gene-RM680_RS02790;Dbxref=GenBank:WP_001831968.1;Name=WP_001831968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499394.1;locus_tag=RM680_RS02790;product=toprim domain-containing protein;protein_id=WP_001831968.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	46132	46512	.	-	.	ID=gene-RM680_RS02795;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=RM680_RS02795;old_locus_tag=RM680_02800
NZ_JAVRJI010000003.1	Protein Homology	CDS	46132	46512	.	-	0	ID=cds-WP_001831963.1;Parent=gene-RM680_RS02795;Dbxref=GenBank:WP_001831963.1;Name=WP_001831963.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831963.1;locus_tag=RM680_RS02795;product=glycine cleavage system protein GcvH;protein_id=WP_001831963.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	46686	47039	.	-	.	ID=gene-RM680_RS02800;Name=RM680_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02800;old_locus_tag=RM680_02805
NZ_JAVRJI010000003.1	Protein Homology	CDS	46686	47039	.	-	0	ID=cds-WP_001831965.1;Parent=gene-RM680_RS02800;Dbxref=GenBank:WP_001831965.1;Name=WP_001831965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446009.1;locus_tag=RM680_RS02800;product=arsenate reductase family protein;protein_id=WP_001831965.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	47182	47505	.	+	.	ID=gene-RM680_RS02805;Name=RM680_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02805;old_locus_tag=RM680_02810
NZ_JAVRJI010000003.1	Protein Homology	CDS	47182	47505	.	+	0	ID=cds-WP_001831907.1;Parent=gene-RM680_RS02805;Dbxref=GenBank:WP_001831907.1;Name=WP_001831907.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831907.1;locus_tag=RM680_RS02805;product=thioredoxin family protein;protein_id=WP_001831907.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	47688	48230	.	-	.	ID=gene-RM680_RS02810;Name=RM680_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02810;old_locus_tag=RM680_02815
NZ_JAVRJI010000003.1	Protein Homology	CDS	47688	48230	.	-	0	ID=cds-WP_001831981.1;Parent=gene-RM680_RS02810;Dbxref=GenBank:WP_001831981.1;Name=WP_001831981.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446007.1;locus_tag=RM680_RS02810;product=nitroreductase family protein;protein_id=WP_001831981.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	48311	49027	.	-	.	ID=gene-RM680_RS02815;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=RM680_RS02815;old_locus_tag=RM680_02820
NZ_JAVRJI010000003.1	Protein Homology	CDS	48311	49027	.	-	0	ID=cds-WP_001831974.1;Parent=gene-RM680_RS02815;Dbxref=GenBank:WP_001831974.1;Name=WP_001831974.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493469.1;locus_tag=RM680_RS02815;product=type I 3-dehydroquinate dehydratase;protein_id=WP_001831974.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	49188	49610	.	+	.	ID=gene-RM680_RS02820;Name=RM680_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02820;old_locus_tag=RM680_02825
NZ_JAVRJI010000003.1	Protein Homology	CDS	49188	49610	.	+	0	ID=cds-WP_002457221.1;Parent=gene-RM680_RS02820;Dbxref=GenBank:WP_002457221.1;Name=WP_002457221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499385.1;locus_tag=RM680_RS02820;product=organic hydroperoxide resistance protein;protein_id=WP_002457221.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	49794	49949	.	-	.	ID=gene-RM680_RS02825;Name=RM680_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02825;old_locus_tag=RM680_02830
NZ_JAVRJI010000003.1	GeneMarkS-2+	CDS	49794	49949	.	-	0	ID=cds-WP_001830507.1;Parent=gene-RM680_RS02825;Dbxref=GenBank:WP_001830507.1;Name=WP_001830507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS02825;product=hypothetical protein;protein_id=WP_001830507.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	pseudogene	49961	50148	.	-	.	ID=gene-RM680_RS02830;Name=RM680_RS02830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS02830;old_locus_tag=RM680_02835;pseudo=true
NZ_JAVRJI010000003.1	Protein Homology	CDS	49961	50148	.	-	0	ID=cds-RM680_RS02830;Parent=gene-RM680_RS02830;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456764.1;locus_tag=RM680_RS02830;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	50535	51035	.	+	.	ID=gene-RM680_RS02835;Name=RM680_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02835;old_locus_tag=RM680_02840
NZ_JAVRJI010000003.1	Protein Homology	CDS	50535	51035	.	+	0	ID=cds-WP_001829623.1;Parent=gene-RM680_RS02835;Dbxref=GenBank:WP_001829623.1;Name=WP_001829623.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469328.1;locus_tag=RM680_RS02835;product=GNAT family N-acetyltransferase;protein_id=WP_001829623.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	51306	51893	.	-	.	ID=gene-RM680_RS02840;Name=RM680_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02840;old_locus_tag=RM680_02845
NZ_JAVRJI010000003.1	Protein Homology	CDS	51306	51893	.	-	0	ID=cds-WP_001829615.1;Parent=gene-RM680_RS02840;Dbxref=GenBank:WP_001829615.1;Name=WP_001829615.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486338.1;locus_tag=RM680_RS02840;product=histidine phosphatase family protein;protein_id=WP_001829615.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	52105	52341	.	+	.	ID=gene-RM680_RS02845;Name=RM680_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02845;old_locus_tag=RM680_02850
NZ_JAVRJI010000003.1	Protein Homology	CDS	52105	52341	.	+	0	ID=cds-WP_002457224.1;Parent=gene-RM680_RS02845;Dbxref=GenBank:WP_002457224.1;Name=WP_002457224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491230.1;locus_tag=RM680_RS02845;product=hypothetical protein;protein_id=WP_002457224.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	52333	52536	.	-	.	ID=gene-RM680_RS02850;Name=RM680_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02850;old_locus_tag=RM680_02855
NZ_JAVRJI010000003.1	Protein Homology	CDS	52333	52536	.	-	0	ID=cds-WP_002438966.1;Parent=gene-RM680_RS02850;Dbxref=GenBank:WP_002438966.1;Name=WP_002438966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474247.1;locus_tag=RM680_RS02850;product=sterile alpha motif-like domain-containing protein;protein_id=WP_002438966.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	52945	53202	.	+	.	ID=gene-RM680_RS02855;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=RM680_RS02855;old_locus_tag=RM680_02860
NZ_JAVRJI010000003.1	Protein Homology	CDS	52945	53202	.	+	0	ID=cds-WP_002438963.1;Parent=gene-RM680_RS02855;Dbxref=GenBank:WP_002438963.1;Name=WP_002438963.1;Ontology_term=GO:0110001;gbkey=CDS;gene=tsaA;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438963.1;locus_tag=RM680_RS02855;product=type II toxin-antitoxin system antitoxin TsaA;protein_id=WP_002438963.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	53227	53415	.	+	.	ID=gene-RM680_RS02860;Name=tsaT;gbkey=Gene;gene=tsaT;gene_biotype=protein_coding;locus_tag=RM680_RS02860;old_locus_tag=RM680_02865
NZ_JAVRJI010000003.1	Protein Homology	CDS	53227	53415	.	+	0	ID=cds-WP_001829569.1;Parent=gene-RM680_RS02860;Dbxref=GenBank:WP_001829569.1;Name=WP_001829569.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;gene=tsaT;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445998.1;locus_tag=RM680_RS02860;product=type II toxin-antitoxin system toxin TsaT;protein_id=WP_001829569.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	53605	54159	.	+	.	ID=gene-RM680_RS02865;Name=lnsA;gbkey=Gene;gene=lnsA;gene_biotype=protein_coding;locus_tag=RM680_RS02865;old_locus_tag=RM680_02870
NZ_JAVRJI010000003.1	Protein Homology	CDS	53605	54159	.	+	0	ID=cds-WP_001829566.1;Parent=gene-RM680_RS02865;Dbxref=GenBank:WP_001829566.1;Name=WP_001829566.1;gbkey=CDS;gene=lnsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474279.1;locus_tag=RM680_RS02865;product=lipoprotein N-acylation protein LnsA;protein_id=WP_001829566.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	54219	54452	.	-	.	ID=gene-RM680_RS02870;Name=RM680_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02870;old_locus_tag=RM680_02875
NZ_JAVRJI010000003.1	Protein Homology	CDS	54219	54452	.	-	0	ID=cds-WP_001829664.1;Parent=gene-RM680_RS02870;Dbxref=GenBank:WP_001829664.1;Name=WP_001829664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497152.1;locus_tag=RM680_RS02870;product=hypothetical protein;protein_id=WP_001829664.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	54736	55482	.	+	.	ID=gene-RM680_RS02875;Name=RM680_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02875;old_locus_tag=RM680_02880
NZ_JAVRJI010000003.1	Protein Homology	CDS	54736	55482	.	+	0	ID=cds-WP_002438959.1;Parent=gene-RM680_RS02875;Dbxref=GenBank:WP_002438959.1;Name=WP_002438959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438959.1;locus_tag=RM680_RS02875;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_002438959.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	55581	55865	.	+	.	ID=gene-RM680_RS02880;Name=RM680_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02880;old_locus_tag=RM680_02885
NZ_JAVRJI010000003.1	Protein Homology	CDS	55581	55865	.	+	0	ID=cds-WP_001829635.1;Parent=gene-RM680_RS02880;Dbxref=GenBank:WP_001829635.1;Name=WP_001829635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497154.1;locus_tag=RM680_RS02880;product=hypothetical protein;protein_id=WP_001829635.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	55889	56113	.	+	.	ID=gene-RM680_RS02885;Name=RM680_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02885;old_locus_tag=RM680_02890
NZ_JAVRJI010000003.1	Protein Homology	CDS	55889	56113	.	+	0	ID=cds-WP_001829613.1;Parent=gene-RM680_RS02885;Dbxref=GenBank:WP_001829613.1;Name=WP_001829613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476472.1;locus_tag=RM680_RS02885;product=hypothetical protein;protein_id=WP_001829613.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	56734	56934	.	-	.	ID=gene-RM680_RS02890;Name=RM680_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02890;old_locus_tag=RM680_02895
NZ_JAVRJI010000003.1	Protein Homology	CDS	56734	56934	.	-	0	ID=cds-WP_001829681.1;Parent=gene-RM680_RS02890;Dbxref=GenBank:WP_001829681.1;Name=WP_001829681.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059082.1;locus_tag=RM680_RS02890;product=cold-shock protein;protein_id=WP_001829681.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	57828	57902	.	+	.	ID=gene-RM680_RS11975;Name=RM680_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11975
NZ_JAVRJI010000003.1	Protein Homology	CDS	57828	57902	.	+	0	ID=cds-WP_095658922.1;Parent=gene-RM680_RS11975;Dbxref=GenBank:WP_095658922.1;Name=WP_095658922.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033428.5;locus_tag=RM680_RS11975;product=epsilon family phenol-soluble modulin;protein_id=WP_095658922.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	58300	59241	.	-	.	ID=gene-RM680_RS02895;Name=RM680_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02895;old_locus_tag=RM680_02900
NZ_JAVRJI010000003.1	Protein Homology	CDS	58300	59241	.	-	0	ID=cds-WP_001829688.1;Parent=gene-RM680_RS02895;Dbxref=GenBank:WP_001829688.1;Name=WP_001829688.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445993.1;locus_tag=RM680_RS02895;product=cation diffusion facilitator family transporter;protein_id=WP_001829688.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	59528	60031	.	+	.	ID=gene-RM680_RS02900;Name=RM680_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02900;old_locus_tag=RM680_02905
NZ_JAVRJI010000003.1	Protein Homology	CDS	59528	60031	.	+	0	ID=cds-WP_002438954.1;Parent=gene-RM680_RS02900;Dbxref=GenBank:WP_002438954.1;Name=WP_002438954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464628.1;locus_tag=RM680_RS02900;product=YagU family protein;protein_id=WP_002438954.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	60539	60715	.	+	.	ID=gene-RM680_RS02905;Name=RM680_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02905;old_locus_tag=RM680_02910
NZ_JAVRJI010000003.1	Protein Homology	CDS	60539	60715	.	+	0	ID=cds-WP_002438952.1;Parent=gene-RM680_RS02905;Dbxref=GenBank:WP_002438952.1;Name=WP_002438952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498419.1;locus_tag=RM680_RS02905;product=hypothetical protein;protein_id=WP_002438952.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	61531	61947	.	+	.	ID=gene-RM680_RS02910;Name=RM680_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02910;old_locus_tag=RM680_02915
NZ_JAVRJI010000003.1	Protein Homology	CDS	61531	61947	.	+	0	ID=cds-WP_002438949.1;Parent=gene-RM680_RS02910;Dbxref=GenBank:WP_002438949.1;Name=WP_002438949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495356.1;locus_tag=RM680_RS02910;product=hypothetical protein;protein_id=WP_002438949.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	62167	62511	.	-	.	ID=gene-RM680_RS02915;Name=RM680_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02915;old_locus_tag=RM680_02920
NZ_JAVRJI010000003.1	Protein Homology	CDS	62167	62511	.	-	0	ID=cds-WP_002438947.1;Parent=gene-RM680_RS02915;Dbxref=GenBank:WP_002438947.1;Name=WP_002438947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832602.1;locus_tag=RM680_RS02915;product=DUF4260 domain-containing protein;protein_id=WP_002438947.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	62737	64044	.	+	.	ID=gene-RM680_RS02920;Name=RM680_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02920;old_locus_tag=RM680_02925
NZ_JAVRJI010000003.1	Protein Homology	CDS	62737	64044	.	+	0	ID=cds-WP_001832616.1;Parent=gene-RM680_RS02920;Dbxref=GenBank:WP_001832616.1;Name=WP_001832616.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832616.1;locus_tag=RM680_RS02920;product=TrkH family potassium uptake protein;protein_id=WP_001832616.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	64657	64890	.	+	.	ID=gene-RM680_RS02925;Name=RM680_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02925;old_locus_tag=RM680_02930
NZ_JAVRJI010000003.1	Protein Homology	CDS	64657	64890	.	+	0	ID=cds-WP_001829658.1;Parent=gene-RM680_RS02925;Dbxref=GenBank:WP_001829658.1;Name=WP_001829658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829658.1;locus_tag=RM680_RS02925;product=hypothetical protein;protein_id=WP_001829658.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	65148	65318	.	-	.	ID=gene-RM680_RS02930;Name=RM680_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02930;old_locus_tag=RM680_02935
NZ_JAVRJI010000003.1	Protein Homology	CDS	65148	65318	.	-	0	ID=cds-WP_001829642.1;Parent=gene-RM680_RS02930;Dbxref=GenBank:WP_001829642.1;Name=WP_001829642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829642.1;locus_tag=RM680_RS02930;product=VraH family peptide resistance protein;protein_id=WP_001829642.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	66053	66595	.	+	.	ID=gene-RM680_RS02935;Name=RM680_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02935;old_locus_tag=RM680_02940
NZ_JAVRJI010000003.1	Protein Homology	CDS	66053	66595	.	+	0	ID=cds-WP_001832592.1;Parent=gene-RM680_RS02935;Dbxref=GenBank:WP_001832592.1;Name=WP_001832592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504665.1;locus_tag=RM680_RS02935;product=hypothetical protein;protein_id=WP_001832592.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	66739	66918	.	-	.	ID=gene-RM680_RS02940;Name=RM680_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02940;old_locus_tag=RM680_02945
NZ_JAVRJI010000003.1	Protein Homology	CDS	66739	66918	.	-	0	ID=cds-WP_001829655.1;Parent=gene-RM680_RS02940;Dbxref=GenBank:WP_001829655.1;Name=WP_001829655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829655.1;locus_tag=RM680_RS02940;product=hypothetical protein;protein_id=WP_001829655.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	pseudogene	66884	67515	.	+	.	ID=gene-RM680_RS02945;Name=RM680_RS02945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS02945;old_locus_tag=RM680_02950;partial=true;pseudo=true;start_range=.,66884
NZ_JAVRJI010000003.1	Protein Homology	CDS	66884	67515	.	+	0	ID=cds-RM680_RS02945;Parent=gene-RM680_RS02945;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728767.1;locus_tag=RM680_RS02945;partial=true;product=site-specific integrase;pseudo=true;start_range=.,66884;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	67528	67758	.	+	.	ID=gene-RM680_RS02950;Name=RM680_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02950;old_locus_tag=RM680_02955
NZ_JAVRJI010000003.1	Protein Homology	CDS	67528	67758	.	+	0	ID=cds-WP_002438942.1;Parent=gene-RM680_RS02950;Dbxref=GenBank:WP_002438942.1;Name=WP_002438942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500547.1;locus_tag=RM680_RS02950;product=hypothetical protein;protein_id=WP_002438942.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	67841	68202	.	-	.	ID=gene-RM680_RS02955;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=RM680_RS02955;old_locus_tag=RM680_02960
NZ_JAVRJI010000003.1	cmsearch	tmRNA	67841	68202	.	-	.	ID=rna-RM680_RS02955;Parent=gene-RM680_RS02955;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS02955;product=transfer-messenger RNA
NZ_JAVRJI010000003.1	cmsearch	exon	67841	68202	.	-	.	ID=exon-RM680_RS02955-1;Parent=rna-RM680_RS02955;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS02955;product=transfer-messenger RNA
NZ_JAVRJI010000003.1	RefSeq	gene	68308	68778	.	-	.	ID=gene-RM680_RS02960;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=RM680_RS02960;old_locus_tag=RM680_02965
NZ_JAVRJI010000003.1	Protein Homology	CDS	68308	68778	.	-	0	ID=cds-WP_001829588.1;Parent=gene-RM680_RS02960;Dbxref=GenBank:WP_001829588.1;Name=WP_001829588.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899691.1;locus_tag=RM680_RS02960;product=SsrA-binding protein SmpB;protein_id=WP_001829588.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	68803	71181	.	-	.	ID=gene-RM680_RS02965;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=RM680_RS02965;old_locus_tag=RM680_02970
NZ_JAVRJI010000003.1	Protein Homology	CDS	68803	71181	.	-	0	ID=cds-WP_311563500.1;Parent=gene-RM680_RS02965;Dbxref=GenBank:WP_311563500.1;Name=WP_311563500.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499359.1;locus_tag=RM680_RS02965;product=ribonuclease R;protein_id=WP_311563500.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	71216	71956	.	-	.	ID=gene-RM680_RS02970;Name=RM680_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02970;old_locus_tag=RM680_02975
NZ_JAVRJI010000003.1	Protein Homology	CDS	71216	71956	.	-	0	ID=cds-WP_001829672.1;Parent=gene-RM680_RS02970;Dbxref=GenBank:WP_001829672.1;Name=WP_001829672.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499358.1;locus_tag=RM680_RS02970;product=alpha/beta hydrolase;protein_id=WP_001829672.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	72257	72490	.	-	.	ID=gene-RM680_RS02975;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=RM680_RS02975;old_locus_tag=RM680_02980
NZ_JAVRJI010000003.1	Protein Homology	CDS	72257	72490	.	-	0	ID=cds-WP_001829669.1;Parent=gene-RM680_RS02975;Dbxref=GenBank:WP_001829669.1;Name=WP_001829669.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499357.2;locus_tag=RM680_RS02975;product=preprotein translocase subunit SecG;protein_id=WP_001829669.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	72559	73017	.	-	.	ID=gene-RM680_RS02980;Name=RM680_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS02980;old_locus_tag=RM680_02985
NZ_JAVRJI010000003.1	Protein Homology	CDS	72559	73017	.	-	0	ID=cds-WP_001829646.1;Parent=gene-RM680_RS02980;Dbxref=GenBank:WP_001829646.1;Name=WP_001829646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495253.1;locus_tag=RM680_RS02980;product=hypothetical protein;protein_id=WP_001829646.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	73183	74487	.	-	.	ID=gene-RM680_RS02985;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=RM680_RS02985;old_locus_tag=RM680_02990
NZ_JAVRJI010000003.1	Protein Homology	CDS	73183	74487	.	-	0	ID=cds-WP_311563501.1;Parent=gene-RM680_RS02985;Dbxref=GenBank:WP_311563501.1;Name=WP_311563501.1;gbkey=CDS;gene=eno;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1;locus_tag=RM680_RS02985;product=surface-displayed alpha-enolase;protein_id=WP_311563501.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	74626	76143	.	-	.	ID=gene-RM680_RS02990;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=RM680_RS02990;old_locus_tag=RM680_02995
NZ_JAVRJI010000003.1	Protein Homology	CDS	74626	76143	.	-	0	ID=cds-WP_002473969.1;Parent=gene-RM680_RS02990;Dbxref=GenBank:WP_002473969.1;Name=WP_002473969.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956091.1;locus_tag=RM680_RS02990;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_002473969.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	76146	76907	.	-	.	ID=gene-RM680_RS02995;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=RM680_RS02995;old_locus_tag=RM680_03000
NZ_JAVRJI010000003.1	Protein Homology	CDS	76146	76907	.	-	0	ID=cds-WP_002473964.1;Parent=gene-RM680_RS02995;Dbxref=GenBank:WP_002473964.1;Name=WP_002473964.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499353.1;locus_tag=RM680_RS02995;product=triose-phosphate isomerase;protein_id=WP_002473964.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	77038	78228	.	-	.	ID=gene-RM680_RS03000;Name=RM680_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03000;old_locus_tag=RM680_03005
NZ_JAVRJI010000003.1	Protein Homology	CDS	77038	78228	.	-	0	ID=cds-WP_002468861.1;Parent=gene-RM680_RS03000;Dbxref=GenBank:WP_002468861.1;Name=WP_002468861.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499352.1;locus_tag=RM680_RS03000;product=phosphoglycerate kinase;protein_id=WP_002468861.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	78422	79432	.	-	.	ID=gene-RM680_RS03005;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=RM680_RS03005;old_locus_tag=RM680_03010
NZ_JAVRJI010000003.1	Protein Homology	CDS	78422	79432	.	-	0	ID=cds-WP_001829667.1;Parent=gene-RM680_RS03005;Dbxref=GenBank:WP_001829667.1;Name=WP_001829667.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499351.1;locus_tag=RM680_RS03005;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_001829667.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	79484	80497	.	-	.	ID=gene-RM680_RS03010;Name=RM680_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03010;old_locus_tag=RM680_03015
NZ_JAVRJI010000003.1	Protein Homology	CDS	79484	80497	.	-	0	ID=cds-WP_002438918.1;Parent=gene-RM680_RS03010;Dbxref=GenBank:WP_002438918.1;Name=WP_002438918.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499350.1;locus_tag=RM680_RS03010;product=sugar-binding transcriptional regulator;protein_id=WP_002438918.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	80853	81089	.	+	.	ID=gene-RM680_RS03015;Name=RM680_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03015;old_locus_tag=RM680_03020
NZ_JAVRJI010000003.1	Protein Homology	CDS	80853	81089	.	+	0	ID=cds-WP_001829687.1;Parent=gene-RM680_RS03015;Dbxref=GenBank:WP_001829687.1;Name=WP_001829687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476443.1;locus_tag=RM680_RS03015;product=hypothetical protein;protein_id=WP_001829687.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	81262	81882	.	-	.	ID=gene-RM680_RS03020;Name=RM680_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03020;old_locus_tag=RM680_03025
NZ_JAVRJI010000003.1	Protein Homology	CDS	81262	81882	.	-	0	ID=cds-WP_002470802.1;Parent=gene-RM680_RS03020;Dbxref=GenBank:WP_002470802.1;Name=WP_002470802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485609.1;locus_tag=RM680_RS03020;product=DUF4887 domain-containing protein;protein_id=WP_002470802.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	82747	83646	.	+	.	ID=gene-RM680_RS03025;Name=RM680_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03025;old_locus_tag=RM680_03030
NZ_JAVRJI010000003.1	Protein Homology	CDS	82747	83646	.	+	0	ID=cds-WP_001829630.1;Parent=gene-RM680_RS03025;Dbxref=GenBank:WP_001829630.1;Name=WP_001829630.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489826.1;locus_tag=RM680_RS03025;product=TIGR01777 family oxidoreductase;protein_id=WP_001829630.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	83677	83868	.	+	.	ID=gene-RM680_RS03030;Name=RM680_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03030;old_locus_tag=RM680_03035
NZ_JAVRJI010000003.1	Protein Homology	CDS	83677	83868	.	+	0	ID=cds-WP_001829614.1;Parent=gene-RM680_RS03030;Dbxref=GenBank:WP_001829614.1;Name=WP_001829614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445958.1;locus_tag=RM680_RS03030;product=hypothetical protein;protein_id=WP_001829614.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	84130	84714	.	-	.	ID=gene-RM680_RS03035;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=RM680_RS03035;old_locus_tag=RM680_03040
NZ_JAVRJI010000003.1	Protein Homology	CDS	84130	84714	.	-	0	ID=cds-WP_001829659.1;Parent=gene-RM680_RS03035;Dbxref=GenBank:WP_001829659.1;Name=WP_001829659.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829659.1;locus_tag=RM680_RS03035;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_001829659.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	84903	84974	.	+	.	ID=gene-RM680_RS03040;Name=RM680_RS03040;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS03040;old_locus_tag=RM680_03045
NZ_JAVRJI010000003.1	tRNAscan-SE	tRNA	84903	84974	.	+	.	ID=rna-RM680_RS03040;Parent=gene-RM680_RS03040;anticodon=(pos:84936..84938);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS03040;product=tRNA-Arg
NZ_JAVRJI010000003.1	tRNAscan-SE	exon	84903	84974	.	+	.	ID=exon-RM680_RS03040-1;Parent=rna-RM680_RS03040;anticodon=(pos:84936..84938);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS03040;product=tRNA-Arg
NZ_JAVRJI010000003.1	RefSeq	gene	85042	85986	.	-	.	ID=gene-RM680_RS03045;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=RM680_RS03045;old_locus_tag=RM680_03050
NZ_JAVRJI010000003.1	Protein Homology	CDS	85042	85986	.	-	0	ID=cds-WP_002438915.1;Parent=gene-RM680_RS03045;Dbxref=GenBank:WP_002438915.1;Name=WP_002438915.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499346.1;locus_tag=RM680_RS03045;product=DNA-binding protein WhiA;protein_id=WP_002438915.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	86115	87110	.	-	.	ID=gene-RM680_RS03050;Name=RM680_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03050;old_locus_tag=RM680_03055
NZ_JAVRJI010000003.1	Protein Homology	CDS	86115	87110	.	-	0	ID=cds-WP_001829626.1;Parent=gene-RM680_RS03050;Dbxref=GenBank:WP_001829626.1;Name=WP_001829626.1;Ontology_term=GO:0043743,GO:0051287;gbkey=CDS;go_function=LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499345.1;locus_tag=RM680_RS03050;product=gluconeogenesis factor YvcK family protein;protein_id=WP_001829626.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	87110	88018	.	-	.	ID=gene-RM680_RS03055;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=RM680_RS03055;old_locus_tag=RM680_03060
NZ_JAVRJI010000003.1	Protein Homology	CDS	87110	88018	.	-	0	ID=cds-WP_001829594.1;Parent=gene-RM680_RS03055;Dbxref=GenBank:WP_001829594.1;Name=WP_001829594.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_044555174.1;locus_tag=RM680_RS03055;product=RNase adapter RapZ;protein_id=WP_001829594.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	88194	89126	.	-	.	ID=gene-RM680_RS03060;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=RM680_RS03060;old_locus_tag=RM680_03065
NZ_JAVRJI010000003.1	Protein Homology	CDS	88194	89126	.	-	0	ID=cds-WP_002438914.1;Parent=gene-RM680_RS03060;Dbxref=GenBank:WP_002438914.1;Name=WP_002438914.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502488.1;locus_tag=RM680_RS03060;product=thioredoxin-disulfide reductase;protein_id=WP_002438914.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	89191	90630	.	-	.	ID=gene-RM680_RS03065;Name=RM680_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03065;old_locus_tag=RM680_03070
NZ_JAVRJI010000003.1	Protein Homology	CDS	89191	90630	.	-	0	ID=cds-WP_002468672.1;Parent=gene-RM680_RS03065;Dbxref=GenBank:WP_002468672.1;Name=WP_002468672.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445953.1;locus_tag=RM680_RS03065;product=tetratricopeptide repeat protein;protein_id=WP_002468672.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	90597	91133	.	-	.	ID=gene-RM680_RS03070;Name=RM680_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03070;old_locus_tag=RM680_03075
NZ_JAVRJI010000003.1	Protein Homology	CDS	90597	91133	.	-	0	ID=cds-WP_001832606.1;Parent=gene-RM680_RS03070;Dbxref=GenBank:WP_001832606.1;Name=WP_001832606.1;Ontology_term=GO:0046677,GO:0016746,GO:0120225;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,coenzyme A binding|0120225||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486661.1;locus_tag=RM680_RS03070;product=acyltransferase;protein_id=WP_001832606.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	91130	91969	.	-	.	ID=gene-RM680_RS03075;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=RM680_RS03075;old_locus_tag=RM680_03080
NZ_JAVRJI010000003.1	Protein Homology	CDS	91130	91969	.	-	0	ID=cds-WP_002468680.1;Parent=gene-RM680_RS03075;Dbxref=GenBank:WP_002468680.1;Name=WP_002468680.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499339.1;locus_tag=RM680_RS03075;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002468680.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	91975	92907	.	-	.	ID=gene-RM680_RS03080;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=RM680_RS03080;old_locus_tag=RM680_03085
NZ_JAVRJI010000003.1	Protein Homology	CDS	91975	92907	.	-	0	ID=cds-WP_001829649.1;Parent=gene-RM680_RS03080;Dbxref=GenBank:WP_001829649.1;Name=WP_001829649.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499338.1;locus_tag=RM680_RS03080;product=HPr(Ser) kinase/phosphatase;protein_id=WP_001829649.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	93262	96096	.	-	.	ID=gene-RM680_RS03085;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=RM680_RS03085;old_locus_tag=RM680_03090
NZ_JAVRJI010000003.1	Protein Homology	CDS	93262	96096	.	-	0	ID=cds-WP_001829652.1;Parent=gene-RM680_RS03085;Dbxref=GenBank:WP_001829652.1;Name=WP_001829652.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500278.1;locus_tag=RM680_RS03085;product=excinuclease ABC subunit UvrA;protein_id=WP_001829652.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	96104	98089	.	-	.	ID=gene-RM680_RS03090;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=RM680_RS03090;old_locus_tag=RM680_03095
NZ_JAVRJI010000003.1	Protein Homology	CDS	96104	98089	.	-	0	ID=cds-WP_001829601.1;Parent=gene-RM680_RS03090;Dbxref=GenBank:WP_001829601.1;Name=WP_001829601.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473941.1;locus_tag=RM680_RS03090;product=excinuclease ABC subunit UvrB;protein_id=WP_001829601.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	98646	98879	.	-	.	ID=gene-RM680_RS03095;Name=RM680_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03095;old_locus_tag=RM680_03100
NZ_JAVRJI010000003.1	Protein Homology	CDS	98646	98879	.	-	0	ID=cds-WP_001832593.1;Parent=gene-RM680_RS03095;Dbxref=GenBank:WP_001832593.1;Name=WP_001832593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499909.1;locus_tag=RM680_RS03095;product=CsbA family protein;protein_id=WP_001832593.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	98885	99526	.	-	.	ID=gene-RM680_RS03100;Name=RM680_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03100;old_locus_tag=RM680_03105
NZ_JAVRJI010000003.1	Protein Homology	CDS	98885	99526	.	-	0	ID=cds-WP_311563502.1;Parent=gene-RM680_RS03100;Dbxref=GenBank:WP_311563502.1;Name=WP_311563502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829660.1;locus_tag=RM680_RS03100;product=YfbR-like 5'-deoxynucleotidase;protein_id=WP_311563502.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	99835	100635	.	-	.	ID=gene-RM680_RS03105;Name=RM680_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03105;old_locus_tag=RM680_03110
NZ_JAVRJI010000003.1	Protein Homology	CDS	99835	100635	.	-	0	ID=cds-WP_001829621.1;Parent=gene-RM680_RS03105;Dbxref=GenBank:WP_001829621.1;Name=WP_001829621.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473955.1;locus_tag=RM680_RS03105;product=COG3942 and LysM peptidoglycan-binding domain-containing protein;protein_id=WP_001829621.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	100975	102091	.	-	.	ID=gene-RM680_RS03110;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=RM680_RS03110;old_locus_tag=RM680_03115
NZ_JAVRJI010000003.1	Protein Homology	CDS	102020	102091	.	-	0	ID=cds-WP_010959142.1;Parent=gene-RM680_RS03110;Dbxref=GenBank:WP_010959142.1;Name=WP_010959142.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959142.1;locus_tag=RM680_RS03110;product=peptide chain release factor 2;protein_id=WP_010959142.1;transl_table=11
NZ_JAVRJI010000003.1	Protein Homology	CDS	100975	102018	.	-	0	ID=cds-WP_010959142.1;Parent=gene-RM680_RS03110;Dbxref=GenBank:WP_010959142.1;Name=WP_010959142.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959142.1;locus_tag=RM680_RS03110;product=peptide chain release factor 2;protein_id=WP_010959142.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	102287	104821	.	-	.	ID=gene-RM680_RS03115;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=RM680_RS03115;old_locus_tag=RM680_03120
NZ_JAVRJI010000003.1	Protein Homology	CDS	102287	104821	.	-	0	ID=cds-WP_001829572.1;Parent=gene-RM680_RS03115;Dbxref=GenBank:WP_001829572.1;Name=WP_001829572.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496134.1;locus_tag=RM680_RS03115;product=preprotein translocase subunit SecA;protein_id=WP_001829572.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	105487	106056	.	-	.	ID=gene-RM680_RS03120;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=RM680_RS03120;old_locus_tag=RM680_03125
NZ_JAVRJI010000003.1	Protein Homology	CDS	105487	106056	.	-	0	ID=cds-WP_001829676.1;Parent=gene-RM680_RS03120;Dbxref=GenBank:WP_001829676.1;Name=WP_001829676.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503602.1;locus_tag=RM680_RS03120;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_001829676.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	106117	106791	.	-	.	ID=gene-RM680_RS03125;Name=RM680_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03125;old_locus_tag=RM680_03130
NZ_JAVRJI010000003.1	Protein Homology	CDS	106117	106791	.	-	0	ID=cds-WP_001829592.1;Parent=gene-RM680_RS03125;Dbxref=GenBank:WP_001829592.1;Name=WP_001829592.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476228.1;locus_tag=RM680_RS03125;product=ComF family protein;protein_id=WP_001829592.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	106784	108055	.	-	.	ID=gene-RM680_RS03130;Name=RM680_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03130;old_locus_tag=RM680_03135
NZ_JAVRJI010000003.1	Protein Homology	CDS	106784	108055	.	-	0	ID=cds-WP_310985927.1;Parent=gene-RM680_RS03130;Dbxref=GenBank:WP_310985927.1;Name=WP_310985927.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433160.1;locus_tag=RM680_RS03130;product=DEAD/DEAH box helicase family protein;protein_id=WP_310985927.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	108190	109056	.	-	.	ID=gene-RM680_RS03135;Name=fakB1;gbkey=Gene;gene=fakB1;gene_biotype=protein_coding;locus_tag=RM680_RS03135;old_locus_tag=RM680_03140
NZ_JAVRJI010000003.1	Protein Homology	CDS	108190	109056	.	-	0	ID=cds-WP_001829661.1;Parent=gene-RM680_RS03135;Dbxref=GenBank:WP_001829661.1;Name=WP_001829661.1;gbkey=CDS;gene=fakB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473942.1;locus_tag=RM680_RS03135;product=fatty acid kinase binding subunit FakB1;protein_id=WP_001829661.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	109201	109842	.	+	.	ID=gene-RM680_RS03140;Name=RM680_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03140;old_locus_tag=RM680_03145
NZ_JAVRJI010000003.1	Protein Homology	CDS	109201	109842	.	+	0	ID=cds-WP_001829639.1;Parent=gene-RM680_RS03140;Dbxref=GenBank:WP_001829639.1;Name=WP_001829639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498604.1;locus_tag=RM680_RS03140;product=YigZ family protein;protein_id=WP_001829639.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	109903	110982	.	-	.	ID=gene-RM680_RS03145;Name=RM680_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03145;old_locus_tag=RM680_03150
NZ_JAVRJI010000003.1	Protein Homology	CDS	109903	110982	.	-	0	ID=cds-WP_001829686.1;Parent=gene-RM680_RS03145;Dbxref=GenBank:WP_001829686.1;Name=WP_001829686.1;Ontology_term=GO:0070085,GO:0016757,GO:0016780,GO:0046872;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=glycosylation|0070085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829686.1;locus_tag=RM680_RS03145;product=glycosyltransferase family 4 protein;protein_id=WP_001829686.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	111328	112398	.	+	.	ID=gene-RM680_RS03150;Name=gdpS;gbkey=Gene;gene=gdpS;gene_biotype=protein_coding;locus_tag=RM680_RS03150;old_locus_tag=RM680_03155
NZ_JAVRJI010000003.1	Protein Homology	CDS	111328	112398	.	+	0	ID=cds-WP_002494710.1;Parent=gene-RM680_RS03150;Dbxref=GenBank:WP_002494710.1;Name=WP_002494710.1;gbkey=CDS;gene=gdpS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499319.1;locus_tag=RM680_RS03150;product=GGDEF domain-containing protein GdpS;protein_id=WP_002494710.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	112593	113354	.	+	.	ID=gene-RM680_RS03155;Name=RM680_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03155;old_locus_tag=RM680_03160
NZ_JAVRJI010000003.1	Protein Homology	CDS	112593	113354	.	+	0	ID=cds-WP_001829644.1;Parent=gene-RM680_RS03155;Dbxref=GenBank:WP_001829644.1;Name=WP_001829644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499318.1;locus_tag=RM680_RS03155;product=threonine/serine exporter family protein;protein_id=WP_001829644.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	113370	113864	.	+	.	ID=gene-RM680_RS03160;Name=RM680_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03160;old_locus_tag=RM680_03165
NZ_JAVRJI010000003.1	Protein Homology	CDS	113370	113864	.	+	0	ID=cds-WP_001829634.1;Parent=gene-RM680_RS03160;Dbxref=GenBank:WP_001829634.1;Name=WP_001829634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499317.1;locus_tag=RM680_RS03160;product=threonine/serine exporter family protein;protein_id=WP_001829634.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	113885	115123	.	+	.	ID=gene-RM680_RS03165;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=RM680_RS03165;old_locus_tag=RM680_03170
NZ_JAVRJI010000003.1	Protein Homology	CDS	113885	115123	.	+	0	ID=cds-WP_002438906.1;Parent=gene-RM680_RS03165;Dbxref=GenBank:WP_002438906.1;Name=WP_002438906.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468678.1;locus_tag=RM680_RS03165;product=peptidase T;protein_id=WP_002438906.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	115214	116344	.	-	.	ID=gene-RM680_RS03170;Name=RM680_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03170;old_locus_tag=RM680_03175
NZ_JAVRJI010000003.1	Protein Homology	CDS	115214	116344	.	-	0	ID=cds-WP_002456129.1;Parent=gene-RM680_RS03170;Dbxref=GenBank:WP_002456129.1;Name=WP_002456129.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470484.1;locus_tag=RM680_RS03170;product=glycerate kinase;protein_id=WP_002456129.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	116615	116935	.	-	.	ID=gene-RM680_RS03175;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=RM680_RS03175;old_locus_tag=RM680_03180
NZ_JAVRJI010000003.1	Protein Homology	CDS	116615	116935	.	-	0	ID=cds-WP_001829675.1;Parent=gene-RM680_RS03175;Dbxref=GenBank:WP_001829675.1;Name=WP_001829675.1;Ontology_term=GO:0006790;gbkey=CDS;gene=ytxJ;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499314.1;locus_tag=RM680_RS03175;product=bacillithiol system redox-active protein YtxJ;protein_id=WP_001829675.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	117084	117974	.	-	.	ID=gene-RM680_RS03180;Name=RM680_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03180;old_locus_tag=RM680_03185
NZ_JAVRJI010000003.1	Protein Homology	CDS	117084	117974	.	-	0	ID=cds-WP_001829568.1;Parent=gene-RM680_RS03180;Dbxref=GenBank:WP_001829568.1;Name=WP_001829568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829568.1;locus_tag=RM680_RS03180;product=EMYY motif lipoprotein;protein_id=WP_001829568.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	118091	118618	.	+	.	ID=gene-RM680_RS03185;Name=RM680_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03185;old_locus_tag=RM680_03190
NZ_JAVRJI010000003.1	Protein Homology	CDS	118091	118618	.	+	0	ID=cds-WP_001829625.1;Parent=gene-RM680_RS03185;Dbxref=GenBank:WP_001829625.1;Name=WP_001829625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496142.1;locus_tag=RM680_RS03185;product=GrpB family protein;protein_id=WP_001829625.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	118735	119667	.	+	.	ID=gene-RM680_RS03190;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=RM680_RS03190;old_locus_tag=RM680_03195
NZ_JAVRJI010000003.1	Protein Homology	CDS	118735	119667	.	+	0	ID=cds-WP_001829600.1;Parent=gene-RM680_RS03190;Dbxref=GenBank:WP_001829600.1;Name=WP_001829600.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276415.1;locus_tag=RM680_RS03190;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_001829600.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	119689	120003	.	+	.	ID=gene-RM680_RS03195;Name=RM680_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03195;old_locus_tag=RM680_03200
NZ_JAVRJI010000003.1	Protein Homology	CDS	119689	120003	.	+	0	ID=cds-WP_001829567.1;Parent=gene-RM680_RS03195;Dbxref=GenBank:WP_001829567.1;Name=WP_001829567.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445928.1;locus_tag=RM680_RS03195;product=CHY zinc finger protein;protein_id=WP_001829567.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	120154	121197	.	-	.	ID=gene-RM680_RS03200;Name=RM680_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03200;old_locus_tag=RM680_03205
NZ_JAVRJI010000003.1	Protein Homology	CDS	120154	121197	.	-	0	ID=cds-WP_001829571.1;Parent=gene-RM680_RS03200;Dbxref=GenBank:WP_001829571.1;Name=WP_001829571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468875.1;locus_tag=RM680_RS03200;product=ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD;protein_id=WP_001829571.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	121276	122055	.	-	.	ID=gene-RM680_RS03205;Name=RM680_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03205;old_locus_tag=RM680_03210
NZ_JAVRJI010000003.1	Protein Homology	CDS	121276	122055	.	-	0	ID=cds-WP_001829596.1;Parent=gene-RM680_RS03205;Dbxref=GenBank:WP_001829596.1;Name=WP_001829596.1;Ontology_term=GO:0006826,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496145.1;locus_tag=RM680_RS03205;product=iron ABC transporter ATP-binding protein;protein_id=WP_001829596.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	122052	123011	.	-	.	ID=gene-RM680_RS03210;Name=RM680_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03210;old_locus_tag=RM680_03215
NZ_JAVRJI010000003.1	Protein Homology	CDS	122052	123011	.	-	0	ID=cds-WP_002438903.1;Parent=gene-RM680_RS03210;Dbxref=GenBank:WP_002438903.1;Name=WP_002438903.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491218.1;locus_tag=RM680_RS03210;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_002438903.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	122995	123969	.	-	.	ID=gene-RM680_RS03215;Name=RM680_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03215;old_locus_tag=RM680_03220
NZ_JAVRJI010000003.1	Protein Homology	CDS	122995	123969	.	-	0	ID=cds-WP_002438902.1;Parent=gene-RM680_RS03215;Dbxref=GenBank:WP_002438902.1;Name=WP_002438902.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464606.1;locus_tag=RM680_RS03215;product=ABC transporter permease;protein_id=WP_002438902.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	123985	124260	.	-	.	ID=gene-RM680_RS03220;Name=RM680_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03220;old_locus_tag=RM680_03225
NZ_JAVRJI010000003.1	Protein Homology	CDS	123985	124260	.	-	0	ID=cds-WP_002503949.1;Parent=gene-RM680_RS03220;Dbxref=GenBank:WP_002503949.1;Name=WP_002503949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456931.1;locus_tag=RM680_RS03220;product=hypothetical protein;protein_id=WP_002503949.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	124235	125203	.	-	.	ID=gene-RM680_RS03225;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=RM680_RS03225;old_locus_tag=RM680_03230
NZ_JAVRJI010000003.1	Protein Homology	CDS	124235	125203	.	-	0	ID=cds-WP_001829597.1;Parent=gene-RM680_RS03225;Dbxref=GenBank:WP_001829597.1;Name=WP_001829597.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491229.1;locus_tag=RM680_RS03225;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_001829597.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	125322	127427	.	-	.	ID=gene-RM680_RS03230;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=RM680_RS03230;old_locus_tag=RM680_03235
NZ_JAVRJI010000003.1	Protein Homology	CDS	125322	127427	.	-	0	ID=cds-WP_001829582.1;Parent=gene-RM680_RS03230;Dbxref=GenBank:WP_001829582.1;Name=WP_001829582.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855513.1;locus_tag=RM680_RS03230;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_001829582.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	127390	127788	.	-	.	ID=gene-RM680_RS03235;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=RM680_RS03235;old_locus_tag=RM680_03240
NZ_JAVRJI010000003.1	Protein Homology	CDS	127390	127788	.	-	0	ID=cds-WP_001829589.1;Parent=gene-RM680_RS03235;Dbxref=GenBank:WP_001829589.1;Name=WP_001829589.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002483930.1;locus_tag=RM680_RS03235;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_001829589.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	128543	129418	.	+	.	ID=gene-RM680_RS03240;Name=RM680_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03240;old_locus_tag=RM680_03245
NZ_JAVRJI010000003.1	Protein Homology	CDS	128543	129418	.	+	0	ID=cds-WP_001829684.1;Parent=gene-RM680_RS03240;Dbxref=GenBank:WP_001829684.1;Name=WP_001829684.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445920.1;locus_tag=RM680_RS03240;product=DMT family transporter;protein_id=WP_001829684.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	129432	129932	.	+	.	ID=gene-RM680_RS03245;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=RM680_RS03245;old_locus_tag=RM680_03250
NZ_JAVRJI010000003.1	Protein Homology	CDS	129432	129932	.	+	0	ID=cds-WP_001832596.1;Parent=gene-RM680_RS03245;Dbxref=GenBank:WP_001832596.1;Name=WP_001832596.1;Ontology_term=GO:0008616,GO:0033739,GO:0046857,GO:0005737;gbkey=CDS;gene=queF;go_component=cytoplasm|0005737||IEA;go_function=preQ1 synthase activity|0033739||IEA,oxidoreductase activity%2C acting on other nitrogenous compounds as donors%2C with NAD or NADP as acceptor|0046857||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499299.1;locus_tag=RM680_RS03245;product=preQ(1) synthase;protein_id=WP_001832596.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	130217	131722	.	+	.	ID=gene-RM680_RS03250;Name=RM680_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03250;old_locus_tag=RM680_03255
NZ_JAVRJI010000003.1	Protein Homology	CDS	130217	131722	.	+	0	ID=cds-WP_002438897.1;Parent=gene-RM680_RS03250;Dbxref=GenBank:WP_002438897.1;Name=WP_002438897.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457605.1;locus_tag=RM680_RS03250;product=peptide MFS transporter;protein_id=WP_002438897.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	132006	132167	.	+	.	ID=gene-RM680_RS03255;Name=RM680_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03255;old_locus_tag=RM680_03260
NZ_JAVRJI010000003.1	GeneMarkS-2+	CDS	132006	132167	.	+	0	ID=cds-WP_001829650.1;Parent=gene-RM680_RS03255;Dbxref=GenBank:WP_001829650.1;Name=WP_001829650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS03255;product=hypothetical protein;protein_id=WP_001829650.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	132377	133300	.	+	.	ID=gene-RM680_RS03260;Name=RM680_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03260;old_locus_tag=RM680_03265
NZ_JAVRJI010000003.1	Protein Homology	CDS	132377	133300	.	+	0	ID=cds-WP_001829680.1;Parent=gene-RM680_RS03260;Dbxref=GenBank:WP_001829680.1;Name=WP_001829680.1;Ontology_term=GO:0008654,GO:0016310,GO:0001727,GO:0005524;gbkey=CDS;go_function=lipid kinase activity|0001727||IEA,ATP binding|0005524||IEA;go_process=phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468862.1;locus_tag=RM680_RS03260;product=diacylglycerol/lipid kinase family protein;protein_id=WP_001829680.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	133699	136308	.	+	.	ID=gene-RM680_RS03265;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=RM680_RS03265;old_locus_tag=RM680_03270
NZ_JAVRJI010000003.1	Protein Homology	CDS	133699	136308	.	+	0	ID=cds-WP_002456130.1;Parent=gene-RM680_RS03265;Dbxref=GenBank:WP_002456130.1;Name=WP_002456130.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445916.1;locus_tag=RM680_RS03265;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_002456130.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	136375	136914	.	-	.	ID=gene-RM680_RS03270;Name=RM680_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03270;old_locus_tag=RM680_03275
NZ_JAVRJI010000003.1	Protein Homology	CDS	136375	136914	.	-	0	ID=cds-WP_001832599.1;Parent=gene-RM680_RS03270;Dbxref=GenBank:WP_001832599.1;Name=WP_001832599.1;Ontology_term=GO:0009264,GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499294.1;locus_tag=RM680_RS03270;product=5' nucleotidase%2C NT5C type;protein_id=WP_001832599.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	137037	138092	.	-	.	ID=gene-RM680_RS03275;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=RM680_RS03275;old_locus_tag=RM680_03280
NZ_JAVRJI010000003.1	Protein Homology	CDS	137037	138092	.	-	0	ID=cds-WP_001829653.1;Parent=gene-RM680_RS03275;Dbxref=GenBank:WP_001829653.1;Name=WP_001829653.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113659.1;locus_tag=RM680_RS03275;product=histidinol-phosphate transaminase;protein_id=WP_001829653.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	138295	139809	.	-	.	ID=gene-RM680_RS03280;Name=RM680_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03280;old_locus_tag=RM680_03285
NZ_JAVRJI010000003.1	Protein Homology	CDS	138295	139809	.	-	0	ID=cds-WP_002438893.1;Parent=gene-RM680_RS03280;Dbxref=GenBank:WP_002438893.1;Name=WP_002438893.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499292.1;locus_tag=RM680_RS03280;product=ABC transporter permease/substrate-binding protein;protein_id=WP_002438893.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	139802	140776	.	-	.	ID=gene-RM680_RS03285;Name=RM680_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03285;old_locus_tag=RM680_03290
NZ_JAVRJI010000003.1	Protein Homology	CDS	139802	140776	.	-	0	ID=cds-WP_002438891.1;Parent=gene-RM680_RS03285;Dbxref=GenBank:WP_002438891.1;Name=WP_002438891.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476180.1;locus_tag=RM680_RS03285;product=ABC transporter ATP-binding protein;protein_id=WP_002438891.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	140976	142757	.	-	.	ID=gene-RM680_RS03290;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=RM680_RS03290;old_locus_tag=RM680_03295
NZ_JAVRJI010000003.1	Protein Homology	CDS	140976	142757	.	-	0	ID=cds-WP_086886647.1;Parent=gene-RM680_RS03290;Dbxref=GenBank:WP_086886647.1;Name=WP_086886647.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499290.1;locus_tag=RM680_RS03290;product=DNA helicase RecQ;protein_id=WP_086886647.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	142768	144657	.	-	.	ID=gene-RM680_RS03295;Name=RM680_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03295;old_locus_tag=RM680_03300
NZ_JAVRJI010000003.1	Protein Homology	CDS	142768	144657	.	-	0	ID=cds-WP_171004438.1;Parent=gene-RM680_RS03295;Dbxref=GenBank:WP_171004438.1;Name=WP_171004438.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433466.1;locus_tag=RM680_RS03295;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_171004438.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	144779	145594	.	+	.	ID=gene-RM680_RS03300;Name=RM680_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03300;old_locus_tag=RM680_03305
NZ_JAVRJI010000003.1	Protein Homology	CDS	144779	145594	.	+	0	ID=cds-WP_311563503.1;Parent=gene-RM680_RS03300;Dbxref=GenBank:WP_311563503.1;Name=WP_311563503.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505461.1;locus_tag=RM680_RS03300;product=ZIP family metal transporter;protein_id=WP_311563503.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	pseudogene	145871	146053	.	-	.	ID=gene-RM680_RS03305;Name=RM680_RS03305;end_range=146053,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS03305;old_locus_tag=RM680_03310;partial=true;pseudo=true
NZ_JAVRJI010000003.1	Protein Homology	CDS	145871	146053	.	-	0	ID=cds-RM680_RS03305;Parent=gene-RM680_RS03305;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=146053,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082549.1;locus_tag=RM680_RS03305;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	146487	148427	.	-	.	ID=gene-RM680_RS03310;Name=ltaS;gbkey=Gene;gene=ltaS;gene_biotype=protein_coding;locus_tag=RM680_RS03310;old_locus_tag=RM680_03315
NZ_JAVRJI010000003.1	Protein Homology	CDS	146487	148427	.	-	0	ID=cds-WP_001830354.1;Parent=gene-RM680_RS03310;Dbxref=GenBank:WP_001830354.1;Name=WP_001830354.1;gbkey=CDS;gene=ltaS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499287.1;locus_tag=RM680_RS03310;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;protein_id=WP_001830354.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	148979	149983	.	-	.	ID=gene-RM680_RS03315;Name=RM680_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03315;old_locus_tag=RM680_03320
NZ_JAVRJI010000003.1	Protein Homology	CDS	148979	149983	.	-	0	ID=cds-WP_001830359.1;Parent=gene-RM680_RS03315;Dbxref=GenBank:WP_001830359.1;Name=WP_001830359.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499286.1;locus_tag=RM680_RS03315;product=5-oxoprolinase subunit C family protein;protein_id=WP_001830359.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	149971	150702	.	-	.	ID=gene-RM680_RS03320;Name=RM680_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03320;old_locus_tag=RM680_03325
NZ_JAVRJI010000003.1	Protein Homology	CDS	149971	150702	.	-	0	ID=cds-WP_001830356.1;Parent=gene-RM680_RS03320;Dbxref=GenBank:WP_001830356.1;Name=WP_001830356.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490779.1;locus_tag=RM680_RS03320;product=5-oxoprolinase subunit B family protein;protein_id=WP_001830356.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	150721	150927	.	-	.	ID=gene-RM680_RS03325;Name=RM680_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03325;old_locus_tag=RM680_03330
NZ_JAVRJI010000003.1	Protein Homology	CDS	150721	150927	.	-	0	ID=cds-WP_001830353.1;Parent=gene-RM680_RS03325;Dbxref=GenBank:WP_001830353.1;Name=WP_001830353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830353.1;locus_tag=RM680_RS03325;product=hypothetical protein;protein_id=WP_001830353.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	150976	151584	.	-	.	ID=gene-RM680_RS03330;Name=RM680_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03330;old_locus_tag=RM680_03335
NZ_JAVRJI010000003.1	Protein Homology	CDS	150976	151584	.	-	0	ID=cds-WP_001830316.1;Parent=gene-RM680_RS03330;Dbxref=GenBank:WP_001830316.1;Name=WP_001830316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830316.1;locus_tag=RM680_RS03330;product=aminotransferase class IV;protein_id=WP_001830316.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	151586	152737	.	-	.	ID=gene-RM680_RS03335;Name=RM680_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03335;old_locus_tag=RM680_03340
NZ_JAVRJI010000003.1	Protein Homology	CDS	151586	152737	.	-	0	ID=cds-WP_001830323.1;Parent=gene-RM680_RS03335;Dbxref=GenBank:WP_001830323.1;Name=WP_001830323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502021.1;locus_tag=RM680_RS03335;product=chorismate-binding protein;protein_id=WP_001830323.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	152727	153314	.	-	.	ID=gene-RM680_RS03340;Name=RM680_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03340;old_locus_tag=RM680_03345
NZ_JAVRJI010000003.1	Protein Homology	CDS	152727	153314	.	-	0	ID=cds-WP_021298803.1;Parent=gene-RM680_RS03340;Dbxref=GenBank:WP_021298803.1;Name=WP_021298803.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457621.1;locus_tag=RM680_RS03340;product=anthranilate synthase component II;protein_id=WP_021298803.1;transl_table=11
NZ_JAVRJI010000003.1	cmsearch	riboswitch	153433	153479	.	+	.	ID=id-NZ_JAVRJI010000003.1:153433..153479;Dbxref=RFAM:RF00522;Note=PreQ1 riboswitch class I;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000003.1	RefSeq	gene	153611	154282	.	+	.	ID=gene-RM680_RS03345;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=RM680_RS03345;old_locus_tag=RM680_03350
NZ_JAVRJI010000003.1	Protein Homology	CDS	153611	154282	.	+	0	ID=cds-WP_001830328.1;Parent=gene-RM680_RS03345;Dbxref=GenBank:WP_001830328.1;Name=WP_001830328.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830328.1;locus_tag=RM680_RS03345;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_001830328.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	154287	154706	.	+	.	ID=gene-RM680_RS03350;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=RM680_RS03350;old_locus_tag=RM680_03355
NZ_JAVRJI010000003.1	Protein Homology	CDS	154287	154706	.	+	0	ID=cds-WP_001830341.1;Parent=gene-RM680_RS03350;Dbxref=GenBank:WP_001830341.1;Name=WP_001830341.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830341.1;locus_tag=RM680_RS03350;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_001830341.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	154707	155420	.	+	.	ID=gene-RM680_RS03355;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=RM680_RS03355;old_locus_tag=RM680_03360
NZ_JAVRJI010000003.1	Protein Homology	CDS	154707	155420	.	+	0	ID=cds-WP_001830330.1;Parent=gene-RM680_RS03355;Dbxref=GenBank:WP_001830330.1;Name=WP_001830330.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499278.1;locus_tag=RM680_RS03355;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_001830330.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	155523	156122	.	+	.	ID=gene-RM680_RS03360;Name=RM680_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03360;old_locus_tag=RM680_03365
NZ_JAVRJI010000003.1	Protein Homology	CDS	155523	156122	.	+	0	ID=cds-WP_001830331.1;Parent=gene-RM680_RS03360;Dbxref=GenBank:WP_001830331.1;Name=WP_001830331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491416.1;locus_tag=RM680_RS03360;product=hypothetical protein;protein_id=WP_001830331.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	156472	156627	.	+	.	ID=gene-RM680_RS03365;Name=RM680_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03365;old_locus_tag=RM680_03370
NZ_JAVRJI010000003.1	GeneMarkS-2+	CDS	156472	156627	.	+	0	ID=cds-WP_002485887.1;Parent=gene-RM680_RS03365;Dbxref=GenBank:WP_002485887.1;Name=WP_002485887.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS03365;product=hypothetical protein;protein_id=WP_002485887.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	157223	157660	.	+	.	ID=gene-RM680_RS03370;Name=RM680_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03370;old_locus_tag=RM680_03375
NZ_JAVRJI010000003.1	Protein Homology	CDS	157223	157660	.	+	0	ID=cds-WP_001830329.1;Parent=gene-RM680_RS03370;Dbxref=GenBank:WP_001830329.1;Name=WP_001830329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499276.1;locus_tag=RM680_RS03370;product=DM13 domain-containing protein;protein_id=WP_001830329.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	157711	158184	.	+	.	ID=gene-RM680_RS03375;Name=RM680_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03375;old_locus_tag=RM680_03380
NZ_JAVRJI010000003.1	Protein Homology	CDS	157711	158184	.	+	0	ID=cds-WP_001830332.1;Parent=gene-RM680_RS03375;Dbxref=GenBank:WP_001830332.1;Name=WP_001830332.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494806.1;locus_tag=RM680_RS03375;product=DoxX family protein;protein_id=WP_001830332.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	pseudogene	158159	158847	.	+	.	ID=gene-RM680_RS03380;Name=saeR;gbkey=Gene;gene=saeR;gene_biotype=pseudogene;locus_tag=RM680_RS03380;old_locus_tag=RM680_03385;pseudo=true
NZ_JAVRJI010000003.1	Protein Homology	CDS	158159	158847	.	+	0	ID=cds-RM680_RS03380;Parent=gene-RM680_RS03380;Note=frameshifted;gbkey=CDS;gene=saeR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499274.1;locus_tag=RM680_RS03380;product=response regulator transcription factor SaeR;pseudo=true;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	158850	159902	.	+	.	ID=gene-RM680_RS03385;Name=RM680_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03385;old_locus_tag=RM680_03390
NZ_JAVRJI010000003.1	Protein Homology	CDS	158850	159902	.	+	0	ID=cds-WP_025987135.1;Parent=gene-RM680_RS03385;Dbxref=GenBank:WP_025987135.1;Name=WP_025987135.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433394.1;locus_tag=RM680_RS03385;product=sensor histidine kinase;protein_id=WP_025987135.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	159972	161078	.	-	.	ID=gene-RM680_RS03390;Name=RM680_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03390;old_locus_tag=RM680_03395
NZ_JAVRJI010000003.1	Protein Homology	CDS	159972	161078	.	-	0	ID=cds-WP_001830351.1;Parent=gene-RM680_RS03390;Dbxref=GenBank:WP_001830351.1;Name=WP_001830351.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457627.1;locus_tag=RM680_RS03390;product=glycosyltransferase family 2 protein;protein_id=WP_001830351.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	161281	162120	.	-	.	ID=gene-RM680_RS03395;Name=RM680_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03395;old_locus_tag=RM680_03400
NZ_JAVRJI010000003.1	Protein Homology	CDS	161281	162120	.	-	0	ID=cds-WP_311563504.1;Parent=gene-RM680_RS03395;Dbxref=GenBank:WP_311563504.1;Name=WP_311563504.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499271.1;locus_tag=RM680_RS03395;product=aldo/keto reductase;protein_id=WP_311563504.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	162335	163684	.	-	.	ID=gene-RM680_RS03400;Name=RM680_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03400;old_locus_tag=RM680_03405
NZ_JAVRJI010000003.1	Protein Homology	CDS	162335	163684	.	-	0	ID=cds-WP_002438880.1;Parent=gene-RM680_RS03400;Dbxref=GenBank:WP_002438880.1;Name=WP_002438880.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499270.1;locus_tag=RM680_RS03400;product=hemolysin family protein;protein_id=WP_002438880.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	163921	165093	.	-	.	ID=gene-RM680_RS03405;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=RM680_RS03405;old_locus_tag=RM680_03410
NZ_JAVRJI010000003.1	Protein Homology	CDS	163921	165093	.	-	0	ID=cds-WP_001830343.1;Parent=gene-RM680_RS03405;Dbxref=GenBank:WP_001830343.1;Name=WP_001830343.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496166.1;locus_tag=RM680_RS03405;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_001830343.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	165467	167419	.	-	.	ID=gene-RM680_RS03410;Name=RM680_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03410;old_locus_tag=RM680_03415
NZ_JAVRJI010000003.1	Protein Homology	CDS	165467	167419	.	-	0	ID=cds-WP_002456133.1;Parent=gene-RM680_RS03410;Dbxref=GenBank:WP_002456133.1;Name=WP_002456133.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0090563;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499267.1;locus_tag=RM680_RS03410;product=PTS fructose transporter subunit IIABC;protein_id=WP_002456133.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	167425	168345	.	-	.	ID=gene-RM680_RS03415;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=RM680_RS03415;old_locus_tag=RM680_03420
NZ_JAVRJI010000003.1	Protein Homology	CDS	167425	168345	.	-	0	ID=cds-WP_002438878.1;Parent=gene-RM680_RS03415;Dbxref=GenBank:WP_002438878.1;Name=WP_002438878.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499266.1;locus_tag=RM680_RS03415;product=1-phosphofructokinase;protein_id=WP_002438878.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	168342	169100	.	-	.	ID=gene-RM680_RS03420;Name=RM680_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03420;old_locus_tag=RM680_03425
NZ_JAVRJI010000003.1	Protein Homology	CDS	168342	169100	.	-	0	ID=cds-WP_002438877.1;Parent=gene-RM680_RS03420;Dbxref=GenBank:WP_002438877.1;Name=WP_002438877.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493521.1;locus_tag=RM680_RS03420;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002438877.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	169331	169813	.	-	.	ID=gene-RM680_RS03425;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=RM680_RS03425;old_locus_tag=RM680_03430
NZ_JAVRJI010000003.1	Protein Homology	CDS	169331	169813	.	-	0	ID=cds-WP_001830357.1;Parent=gene-RM680_RS03425;Dbxref=GenBank:WP_001830357.1;Name=WP_001830357.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501136.1;locus_tag=RM680_RS03425;product=Cys-tRNA(Pro) deacylase;protein_id=WP_001830357.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	169927	170397	.	-	.	ID=gene-RM680_RS03430;Name=RM680_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03430;old_locus_tag=RM680_03435
NZ_JAVRJI010000003.1	Protein Homology	CDS	169927	170397	.	-	0	ID=cds-WP_001830333.1;Parent=gene-RM680_RS03430;Dbxref=GenBank:WP_001830333.1;Name=WP_001830333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499039.1;locus_tag=RM680_RS03430;product=hypothetical protein;protein_id=WP_001830333.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	170719	171882	.	-	.	ID=gene-RM680_RS03435;Name=norA;gbkey=Gene;gene=norA;gene_biotype=protein_coding;locus_tag=RM680_RS03435;old_locus_tag=RM680_03440
NZ_JAVRJI010000003.1	Protein Homology	CDS	170719	171882	.	-	0	ID=cds-WP_001830321.1;Parent=gene-RM680_RS03435;Dbxref=GenBank:WP_001830321.1;Name=WP_001830321.1;gbkey=CDS;gene=norA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501137.1;locus_tag=RM680_RS03435;product=multidrug efflux MFS transporter NorA;protein_id=WP_001830321.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	172292	172909	.	+	.	ID=gene-RM680_RS03440;Name=RM680_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03440;old_locus_tag=RM680_03445
NZ_JAVRJI010000003.1	Protein Homology	CDS	172292	172909	.	+	0	ID=cds-WP_002438866.1;Parent=gene-RM680_RS03440;Dbxref=GenBank:WP_002438866.1;Name=WP_002438866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464501.1;locus_tag=RM680_RS03440;product=DUF1361 domain-containing protein;protein_id=WP_002438866.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	172906	173175	.	+	.	ID=gene-RM680_RS03445;Name=RM680_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03445;old_locus_tag=RM680_03450
NZ_JAVRJI010000003.1	Protein Homology	CDS	172906	173175	.	+	0	ID=cds-WP_002438864.1;Parent=gene-RM680_RS03445;Dbxref=GenBank:WP_002438864.1;Name=WP_002438864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503066.1;locus_tag=RM680_RS03445;product=hypothetical protein;protein_id=WP_002438864.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	173225	174598	.	-	.	ID=gene-RM680_RS03450;Name=RM680_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03450;old_locus_tag=RM680_03455
NZ_JAVRJI010000003.1	Protein Homology	CDS	173225	174598	.	-	0	ID=cds-WP_001830324.1;Parent=gene-RM680_RS03450;Dbxref=GenBank:WP_001830324.1;Name=WP_001830324.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495262.1;locus_tag=RM680_RS03450;product=cryptochrome/photolyase family protein;protein_id=WP_001830324.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	174795	176351	.	-	.	ID=gene-RM680_RS03455;Name=RM680_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03455;old_locus_tag=RM680_03460
NZ_JAVRJI010000003.1	Protein Homology	CDS	174795	176351	.	-	0	ID=cds-WP_002438863.1;Parent=gene-RM680_RS03455;Dbxref=GenBank:WP_002438863.1;Name=WP_002438863.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505661.1;locus_tag=RM680_RS03455;product=SLC13 family permease;protein_id=WP_002438863.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	176485	177426	.	-	.	ID=gene-RM680_RS03460;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=RM680_RS03460;old_locus_tag=RM680_03465
NZ_JAVRJI010000003.1	Protein Homology	CDS	176485	177426	.	-	0	ID=cds-WP_002438862.1;Parent=gene-RM680_RS03460;Dbxref=GenBank:WP_002438862.1;Name=WP_002438862.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362622.1;locus_tag=RM680_RS03460;product=malate dehydrogenase;protein_id=WP_002438862.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	177555	177848	.	-	.	ID=gene-RM680_RS03465;Name=RM680_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03465;old_locus_tag=RM680_03470
NZ_JAVRJI010000003.1	Protein Homology	CDS	177555	177848	.	-	0	ID=cds-WP_001830319.1;Parent=gene-RM680_RS03465;Dbxref=GenBank:WP_001830319.1;Name=WP_001830319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830319.1;locus_tag=RM680_RS03465;product=hypothetical protein;protein_id=WP_001830319.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	177870	178796	.	-	.	ID=gene-RM680_RS03470;Name=RM680_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03470;old_locus_tag=RM680_03475
NZ_JAVRJI010000003.1	Protein Homology	CDS	177870	178796	.	-	0	ID=cds-WP_001830339.1;Parent=gene-RM680_RS03470;Dbxref=GenBank:WP_001830339.1;Name=WP_001830339.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476388.1;locus_tag=RM680_RS03470;product=CobW family GTP-binding protein;protein_id=WP_001830339.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	179018	179461	.	+	.	ID=gene-RM680_RS03475;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=RM680_RS03475;old_locus_tag=RM680_03480
NZ_JAVRJI010000003.1	Protein Homology	CDS	179018	179461	.	+	0	ID=cds-WP_001830335.1;Parent=gene-RM680_RS03475;Dbxref=GenBank:WP_001830335.1;Name=WP_001830335.1;gbkey=CDS;gene=mgrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499253.1;locus_tag=RM680_RS03475;product=HTH-type transcriptional regulator MgrA;protein_id=WP_001830335.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	179702	181396	.	-	.	ID=gene-RM680_RS03480;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=RM680_RS03480;old_locus_tag=RM680_03485
NZ_JAVRJI010000003.1	Protein Homology	CDS	179702	181396	.	-	0	ID=cds-WP_002502812.1;Parent=gene-RM680_RS03480;Dbxref=GenBank:WP_002502812.1;Name=WP_002502812.1;Ontology_term=GO:0033228,GO:0045454,GO:0005524,GO:0033230,GO:0050456,GO:0016020,GO:0055051;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C integrated substrate binding|0055051||IEA;go_function=ATP binding|0005524||IEA,ABC-type cysteine transporter activity|0033230||IEA,L-cystine reductase (NADH) activity|0050456||IEA;go_process=cysteine export across plasma membrane|0033228||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360272.1;locus_tag=RM680_RS03480;product=thiol reductant ABC exporter subunit CydC;protein_id=WP_002502812.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	181393	183027	.	-	.	ID=gene-RM680_RS03485;Name=RM680_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03485;old_locus_tag=RM680_03490
NZ_JAVRJI010000003.1	Protein Homology	CDS	181393	183027	.	-	0	ID=cds-WP_002455988.1;Parent=gene-RM680_RS03485;Dbxref=GenBank:WP_002455988.1;Name=WP_002455988.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464495.1;locus_tag=RM680_RS03485;product=ABC transporter ATP-binding protein/permease;protein_id=WP_002455988.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	183238	184110	.	+	.	ID=gene-RM680_RS03490;Name=RM680_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03490;old_locus_tag=RM680_03495
NZ_JAVRJI010000003.1	Protein Homology	CDS	183238	184110	.	+	0	ID=cds-WP_001832082.1;Parent=gene-RM680_RS03490;Dbxref=GenBank:WP_001832082.1;Name=WP_001832082.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499250.1;locus_tag=RM680_RS03490;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_001832082.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	184393	184857	.	-	.	ID=gene-RM680_RS03495;Name=RM680_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03495;old_locus_tag=RM680_03500
NZ_JAVRJI010000003.1	Protein Homology	CDS	184393	184857	.	-	0	ID=cds-WP_001832179.1;Parent=gene-RM680_RS03495;Dbxref=GenBank:WP_001832179.1;Name=WP_001832179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493269.1;locus_tag=RM680_RS03495;product=GyrI-like domain-containing protein;protein_id=WP_001832179.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	185054	185734	.	+	.	ID=gene-RM680_RS03500;Name=RM680_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03500;old_locus_tag=RM680_03505
NZ_JAVRJI010000003.1	Protein Homology	CDS	185054	185734	.	+	0	ID=cds-WP_001832119.1;Parent=gene-RM680_RS03500;Dbxref=GenBank:WP_001832119.1;Name=WP_001832119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489208.1;locus_tag=RM680_RS03500;product=hypothetical protein;protein_id=WP_001832119.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	185737	186186	.	+	.	ID=gene-RM680_RS03505;Name=RM680_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03505;old_locus_tag=RM680_03510
NZ_JAVRJI010000003.1	Protein Homology	CDS	185737	186186	.	+	0	ID=cds-WP_002438849.1;Parent=gene-RM680_RS03505;Dbxref=GenBank:WP_002438849.1;Name=WP_002438849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438849.1;locus_tag=RM680_RS03505;product=YaiI/YqxD family protein;protein_id=WP_002438849.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	186197	186763	.	+	.	ID=gene-RM680_RS03510;Name=RM680_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03510;old_locus_tag=RM680_03515
NZ_JAVRJI010000003.1	Protein Homology	CDS	186197	186763	.	+	0	ID=cds-WP_001832158.1;Parent=gene-RM680_RS03510;Dbxref=GenBank:WP_001832158.1;Name=WP_001832158.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499247.1;locus_tag=RM680_RS03510;product=LOG family protein;protein_id=WP_001832158.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	187062	187610	.	-	.	ID=gene-RM680_RS03515;Name=RM680_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03515;old_locus_tag=RM680_03520
NZ_JAVRJI010000003.1	Protein Homology	CDS	187062	187610	.	-	0	ID=cds-WP_311563505.1;Parent=gene-RM680_RS03515;Dbxref=GenBank:WP_311563505.1;Name=WP_311563505.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361067.1;locus_tag=RM680_RS03515;product=GNAT family N-acetyltransferase;protein_id=WP_311563505.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	187736	188032	.	-	.	ID=gene-RM680_RS03520;Name=RM680_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03520;old_locus_tag=RM680_03525
NZ_JAVRJI010000003.1	Protein Homology	CDS	187736	188032	.	-	0	ID=cds-WP_001832178.1;Parent=gene-RM680_RS03520;Dbxref=GenBank:WP_001832178.1;Name=WP_001832178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445863.1;locus_tag=RM680_RS03520;product=hypothetical protein;protein_id=WP_001832178.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	188164	188586	.	-	.	ID=gene-RM680_RS03525;Name=RM680_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03525;old_locus_tag=RM680_03530
NZ_JAVRJI010000003.1	Protein Homology	CDS	188164	188586	.	-	0	ID=cds-WP_001832142.1;Parent=gene-RM680_RS03525;Dbxref=GenBank:WP_001832142.1;Name=WP_001832142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489211.1;locus_tag=RM680_RS03525;product=SA0632 family lipoprotein;protein_id=WP_001832142.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	189025	189714	.	+	.	ID=gene-RM680_RS03530;Name=RM680_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03530;old_locus_tag=RM680_03535
NZ_JAVRJI010000003.1	Protein Homology	CDS	189025	189714	.	+	0	ID=cds-WP_001832056.1;Parent=gene-RM680_RS03530;Dbxref=GenBank:WP_001832056.1;Name=WP_001832056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457522.1;locus_tag=RM680_RS03530;product=DUF1129 family protein;protein_id=WP_001832056.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	189770	190258	.	-	.	ID=gene-RM680_RS03535;Name=RM680_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03535;old_locus_tag=RM680_03540
NZ_JAVRJI010000003.1	Protein Homology	CDS	189770	190258	.	-	0	ID=cds-WP_001832028.1;Parent=gene-RM680_RS03535;Dbxref=GenBank:WP_001832028.1;Name=WP_001832028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501023.1;locus_tag=RM680_RS03535;product=DUF456 domain-containing protein;protein_id=WP_001832028.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	190265	191473	.	-	.	ID=gene-RM680_RS03540;Name=RM680_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03540;old_locus_tag=RM680_03545
NZ_JAVRJI010000003.1	Protein Homology	CDS	190265	191473	.	-	0	ID=cds-WP_001832093.1;Parent=gene-RM680_RS03540;Dbxref=GenBank:WP_001832093.1;Name=WP_001832093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832093.1;locus_tag=RM680_RS03540;product=sugar efflux transporter;protein_id=WP_001832093.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	191531	192385	.	-	.	ID=gene-RM680_RS03545;Name=RM680_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03545;old_locus_tag=RM680_03550
NZ_JAVRJI010000003.1	Protein Homology	CDS	191531	192385	.	-	0	ID=cds-WP_001832044.1;Parent=gene-RM680_RS03545;Dbxref=GenBank:WP_001832044.1;Name=WP_001832044.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930914.1;locus_tag=RM680_RS03545;product=LysR family transcriptional regulator;protein_id=WP_001832044.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	192466	193059	.	-	.	ID=gene-RM680_RS03550;Name=RM680_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03550;old_locus_tag=RM680_03555
NZ_JAVRJI010000003.1	Protein Homology	CDS	192466	193059	.	-	0	ID=cds-WP_001832140.1;Parent=gene-RM680_RS03550;Dbxref=GenBank:WP_001832140.1;Name=WP_001832140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457526.1;locus_tag=RM680_RS03550;product=DUF402 domain-containing protein;protein_id=WP_001832140.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	193348	193533	.	-	.	ID=gene-RM680_RS03555;Name=RM680_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03555;old_locus_tag=RM680_03560
NZ_JAVRJI010000003.1	Protein Homology	CDS	193348	193533	.	-	0	ID=cds-WP_001832064.1;Parent=gene-RM680_RS03555;Dbxref=GenBank:WP_001832064.1;Name=WP_001832064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499630.1;locus_tag=RM680_RS03555;product=hypothetical protein;protein_id=WP_001832064.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	193553	194698	.	-	.	ID=gene-RM680_RS03560;Name=RM680_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03560;old_locus_tag=RM680_03565
NZ_JAVRJI010000003.1	Protein Homology	CDS	193553	194698	.	-	0	ID=cds-WP_001832143.1;Parent=gene-RM680_RS03560;Dbxref=GenBank:WP_001832143.1;Name=WP_001832143.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457528.1;locus_tag=RM680_RS03560;product=globin domain-containing protein;protein_id=WP_001832143.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	194870	195544	.	+	.	ID=gene-RM680_RS03565;Name=scdA;gbkey=Gene;gene=scdA;gene_biotype=protein_coding;locus_tag=RM680_RS03565;old_locus_tag=RM680_03570
NZ_JAVRJI010000003.1	Protein Homology	CDS	194870	195544	.	+	0	ID=cds-WP_001832101.1;Parent=gene-RM680_RS03565;Dbxref=GenBank:WP_001832101.1;Name=WP_001832101.1;gbkey=CDS;gene=scdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503062.1;locus_tag=RM680_RS03565;product=iron-sulfur cluster repair di-iron protein ScdA;protein_id=WP_001832101.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	195796	196272	.	-	.	ID=gene-RM680_RS03570;Name=RM680_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03570;old_locus_tag=RM680_03575
NZ_JAVRJI010000003.1	Protein Homology	CDS	195796	196272	.	-	0	ID=cds-WP_001832058.1;Parent=gene-RM680_RS03570;Dbxref=GenBank:WP_001832058.1;Name=WP_001832058.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832058.1;locus_tag=RM680_RS03570;product=cupin domain-containing protein;protein_id=WP_001832058.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	196272	196988	.	-	.	ID=gene-RM680_RS03575;Name=RM680_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03575;old_locus_tag=RM680_03580
NZ_JAVRJI010000003.1	Protein Homology	CDS	196272	196988	.	-	0	ID=cds-WP_001832120.1;Parent=gene-RM680_RS03575;Dbxref=GenBank:WP_001832120.1;Name=WP_001832120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499234.1;locus_tag=RM680_RS03575;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_001832120.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	197241	197600	.	-	.	ID=gene-RM680_RS03580;Name=RM680_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03580;old_locus_tag=RM680_03585
NZ_JAVRJI010000003.1	Protein Homology	CDS	197241	197600	.	-	0	ID=cds-WP_002455993.1;Parent=gene-RM680_RS03580;Dbxref=GenBank:WP_002455993.1;Name=WP_002455993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455993.1;locus_tag=RM680_RS03580;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_002455993.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	pseudogene	197715	199891	.	-	.	ID=gene-RM680_RS03585;Name=RM680_RS03585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS03585;old_locus_tag=RM680_03590;pseudo=true
NZ_JAVRJI010000003.1	Protein Homology	CDS	197715	199891	.	-	0	ID=cds-RM680_RS03585;Parent=gene-RM680_RS03585;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113883.1;locus_tag=RM680_RS03585;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	200154	200813	.	-	.	ID=gene-RM680_RS03590;Name=RM680_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03590;old_locus_tag=RM680_03595
NZ_JAVRJI010000003.1	Protein Homology	CDS	200154	200813	.	-	0	ID=cds-WP_311563506.1;Parent=gene-RM680_RS03590;Dbxref=GenBank:WP_311563506.1;Name=WP_311563506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493261.1;locus_tag=RM680_RS03590;product=Bax inhibitor-1 family protein;protein_id=WP_311563506.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	201224	202024	.	+	.	ID=gene-RM680_RS03595;Name=RM680_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03595;old_locus_tag=RM680_03600
NZ_JAVRJI010000003.1	Protein Homology	CDS	201224	202024	.	+	0	ID=cds-WP_001832086.1;Parent=gene-RM680_RS03595;Dbxref=GenBank:WP_001832086.1;Name=WP_001832086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499230.1;locus_tag=RM680_RS03595;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_001832086.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	202218	203228	.	-	.	ID=gene-RM680_RS03600;Name=RM680_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03600;old_locus_tag=RM680_03605
NZ_JAVRJI010000003.1	Protein Homology	CDS	202218	203228	.	-	0	ID=cds-WP_001832181.1;Parent=gene-RM680_RS03600;Dbxref=GenBank:WP_001832181.1;Name=WP_001832181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500449.1;locus_tag=RM680_RS03600;product=inorganic phosphate transporter;protein_id=WP_001832181.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	203243	203860	.	-	.	ID=gene-RM680_RS03605;Name=RM680_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03605;old_locus_tag=RM680_03610
NZ_JAVRJI010000003.1	Protein Homology	CDS	203243	203860	.	-	0	ID=cds-WP_002457534.1;Parent=gene-RM680_RS03605;Dbxref=GenBank:WP_002457534.1;Name=WP_002457534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499228.1;locus_tag=RM680_RS03605;product=DUF47 domain-containing protein;protein_id=WP_002457534.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	204382	206271	.	-	.	ID=gene-RM680_RS03610;Name=vraG;gbkey=Gene;gene=vraG;gene_biotype=protein_coding;locus_tag=RM680_RS03610;old_locus_tag=RM680_03615
NZ_JAVRJI010000003.1	Protein Homology	CDS	204382	206271	.	-	0	ID=cds-WP_311563507.1;Parent=gene-RM680_RS03610;Dbxref=GenBank:WP_311563507.1;Name=WP_311563507.1;gbkey=CDS;gene=vraG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457535.1;locus_tag=RM680_RS03610;product=ABC transporter permease VraG;protein_id=WP_311563507.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	206261	207022	.	-	.	ID=gene-RM680_RS03615;Name=vraF;gbkey=Gene;gene=vraF;gene_biotype=protein_coding;locus_tag=RM680_RS03615;old_locus_tag=RM680_03620
NZ_JAVRJI010000003.1	Protein Homology	CDS	206261	207022	.	-	0	ID=cds-WP_001833013.1;Parent=gene-RM680_RS03615;Dbxref=GenBank:WP_001833013.1;Name=WP_001833013.1;gbkey=CDS;gene=vraF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499226.1;locus_tag=RM680_RS03615;product=ABC transporter ATP-binding protein VraF;protein_id=WP_001833013.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	207168	208208	.	-	.	ID=gene-RM680_RS03620;Name=graS;gbkey=Gene;gene=graS;gene_biotype=protein_coding;gene_synonym=apsS;locus_tag=RM680_RS03620;old_locus_tag=RM680_03625
NZ_JAVRJI010000003.1	Protein Homology	CDS	207168	208208	.	-	0	ID=cds-WP_002438833.1;Parent=gene-RM680_RS03620;Dbxref=GenBank:WP_002438833.1;Name=WP_002438833.1;gbkey=CDS;gene=graS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468453.1;locus_tag=RM680_RS03620;product=histidine kinase GraS/ApsS;protein_id=WP_002438833.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	208201	208875	.	-	.	ID=gene-RM680_RS03625;Name=graR;gbkey=Gene;gene=graR;gene_biotype=protein_coding;gene_synonym=apsR;locus_tag=RM680_RS03625;old_locus_tag=RM680_03630
NZ_JAVRJI010000003.1	Protein Homology	CDS	208201	208875	.	-	0	ID=cds-WP_001832046.1;Parent=gene-RM680_RS03625;Dbxref=GenBank:WP_001832046.1;Name=WP_001832046.1;gbkey=CDS;gene=graR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499224.1;locus_tag=RM680_RS03625;product=response regulator transcription factor GraR/ApsR;protein_id=WP_001832046.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	208894	209817	.	-	.	ID=gene-RM680_RS03630;Name=graX;gbkey=Gene;gene=graX;gene_biotype=protein_coding;gene_synonym=apsX;locus_tag=RM680_RS03630;old_locus_tag=RM680_03635
NZ_JAVRJI010000003.1	Protein Homology	CDS	208894	209817	.	-	0	ID=cds-WP_001832033.1;Parent=gene-RM680_RS03630;Dbxref=GenBank:WP_001832033.1;Name=WP_001832033.1;gbkey=CDS;gene=graX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832033.1;locus_tag=RM680_RS03630;product=auxiliary protein GraX/ApsX;protein_id=WP_001832033.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	209926	210432	.	+	.	ID=gene-RM680_RS03635;Name=RM680_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03635;old_locus_tag=RM680_03640
NZ_JAVRJI010000003.1	Protein Homology	CDS	209926	210432	.	+	0	ID=cds-WP_001832115.1;Parent=gene-RM680_RS03635;Dbxref=GenBank:WP_001832115.1;Name=WP_001832115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438832.1;locus_tag=RM680_RS03635;product=GNAT family N-acetyltransferase;protein_id=WP_001832115.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	210993	212042	.	-	.	ID=gene-RM680_RS03640;Name=RM680_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03640;old_locus_tag=RM680_03645
NZ_JAVRJI010000003.1	Protein Homology	CDS	210993	212042	.	-	0	ID=cds-WP_311563508.1;Parent=gene-RM680_RS03640;Dbxref=GenBank:WP_311563508.1;Name=WP_311563508.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438830.1;locus_tag=RM680_RS03640;product=alpha/beta hydrolase;protein_id=WP_311563508.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	212320	213387	.	-	.	ID=gene-RM680_RS03645;Name=RM680_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03645;old_locus_tag=RM680_03650
NZ_JAVRJI010000003.1	Protein Homology	CDS	212320	213387	.	-	0	ID=cds-WP_002474354.1;Parent=gene-RM680_RS03645;Dbxref=GenBank:WP_002474354.1;Name=WP_002474354.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499218.1;locus_tag=RM680_RS03645;product=YkvI family membrane protein;protein_id=WP_002474354.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	213612	214112	.	-	.	ID=gene-RM680_RS03650;Name=RM680_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03650;old_locus_tag=RM680_03655
NZ_JAVRJI010000003.1	Protein Homology	CDS	213612	214112	.	-	0	ID=cds-WP_001832127.1;Parent=gene-RM680_RS03650;Dbxref=GenBank:WP_001832127.1;Name=WP_001832127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499217.1;locus_tag=RM680_RS03650;product=hypothetical protein;protein_id=WP_001832127.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	214462	215259	.	-	.	ID=gene-RM680_RS03655;Name=RM680_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03655;old_locus_tag=RM680_03660
NZ_JAVRJI010000003.1	Protein Homology	CDS	214462	215259	.	-	0	ID=cds-WP_002445840.1;Parent=gene-RM680_RS03655;Dbxref=GenBank:WP_002445840.1;Name=WP_002445840.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499211.1;locus_tag=RM680_RS03655;product=ABC transporter ATP-binding protein;protein_id=WP_002445840.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	215618	216451	.	-	.	ID=gene-RM680_RS03660;Name=RM680_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03660;old_locus_tag=RM680_03665
NZ_JAVRJI010000003.1	Protein Homology	CDS	215618	216451	.	-	0	ID=cds-WP_002457541.1;Parent=gene-RM680_RS03660;Dbxref=GenBank:WP_002457541.1;Name=WP_002457541.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499210.1;locus_tag=RM680_RS03660;product=YitT family protein;protein_id=WP_002457541.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	216989	218218	.	-	.	ID=gene-RM680_RS03665;Name=RM680_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03665;old_locus_tag=RM680_03670
NZ_JAVRJI010000003.1	Protein Homology	CDS	216989	218218	.	-	0	ID=cds-WP_311563509.1;Parent=gene-RM680_RS03665;Dbxref=GenBank:WP_311563509.1;Name=WP_311563509.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441322.1;locus_tag=RM680_RS03665;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_311563509.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	218504	220231	.	-	.	ID=gene-RM680_RS03670;Name=RM680_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03670;old_locus_tag=RM680_03675
NZ_JAVRJI010000003.1	Protein Homology	CDS	218504	220231	.	-	0	ID=cds-WP_001832157.1;Parent=gene-RM680_RS03670;Dbxref=GenBank:WP_001832157.1;Name=WP_001832157.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499207.1;locus_tag=RM680_RS03670;product=ABC transporter ATP-binding protein;protein_id=WP_001832157.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	221215	221613	.	-	.	ID=gene-RM680_RS03675;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=RM680_RS03675;old_locus_tag=RM680_03680
NZ_JAVRJI010000003.1	Protein Homology	CDS	221215	221613	.	-	0	ID=cds-WP_001833002.1;Parent=gene-RM680_RS03675;Dbxref=GenBank:WP_001833002.1;Name=WP_001833002.1;Ontology_term=GO:0019350,GO:0046872,GO:0047348,GO:0005737;gbkey=CDS;gene=tagD;go_component=cytoplasm|0005737||IEA;go_function=metal ion binding|0046872||IEA,glycerol-3-phosphate cytidylyltransferase activity|0047348||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499205.1;locus_tag=RM680_RS03675;product=glycerol-3-phosphate cytidylyltransferase;protein_id=WP_001833002.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	221748	222812	.	-	.	ID=gene-RM680_RS03680;Name=RM680_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03680;old_locus_tag=RM680_03685
NZ_JAVRJI010000003.1	Protein Homology	CDS	221748	222812	.	-	0	ID=cds-WP_001832059.1;Parent=gene-RM680_RS03680;Dbxref=GenBank:WP_001832059.1;Name=WP_001832059.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491427.1;locus_tag=RM680_RS03680;product=glycosyltransferase family 2 protein;protein_id=WP_001832059.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	222812	223903	.	-	.	ID=gene-RM680_RS03685;Name=tarB;gbkey=Gene;gene=tarB;gene_biotype=protein_coding;locus_tag=RM680_RS03685;old_locus_tag=RM680_03690
NZ_JAVRJI010000003.1	Protein Homology	CDS	222812	223903	.	-	0	ID=cds-WP_001832991.1;Parent=gene-RM680_RS03685;Dbxref=GenBank:WP_001832991.1;Name=WP_001832991.1;Ontology_term=GO:0019350,GO:0047355;gbkey=CDS;gene=tarB;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832991.1;locus_tag=RM680_RS03685;product=teichoic acid glycerol-phosphate primase TarB;protein_id=WP_001832991.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	224226	225038	.	-	.	ID=gene-RM680_RS03690;Name=RM680_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03690;old_locus_tag=RM680_03695
NZ_JAVRJI010000003.1	Protein Homology	CDS	224226	225038	.	-	0	ID=cds-WP_001832041.1;Parent=gene-RM680_RS03690;Dbxref=GenBank:WP_001832041.1;Name=WP_001832041.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499202.1;locus_tag=RM680_RS03690;product=ABC transporter permease;protein_id=WP_001832041.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	225370	226164	.	+	.	ID=gene-RM680_RS03695;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=RM680_RS03695;old_locus_tag=RM680_03700
NZ_JAVRJI010000003.1	Protein Homology	CDS	225370	226164	.	+	0	ID=cds-WP_001832071.1;Parent=gene-RM680_RS03695;Dbxref=GenBank:WP_001832071.1;Name=WP_001832071.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=tagH;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499201.1;locus_tag=RM680_RS03695;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=WP_001832071.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	226242	227000	.	-	.	ID=gene-RM680_RS03700;Name=tarA;gbkey=Gene;gene=tarA;gene_biotype=protein_coding;locus_tag=RM680_RS03700;old_locus_tag=RM680_03705
NZ_JAVRJI010000003.1	Protein Homology	CDS	226242	227000	.	-	0	ID=cds-WP_002494339.1;Parent=gene-RM680_RS03700;Dbxref=GenBank:WP_002494339.1;Name=WP_002494339.1;Ontology_term=GO:0019350,GO:0047244;gbkey=CDS;gene=tarA;go_function=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity|0047244||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476364.1;locus_tag=RM680_RS03700;product=N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA;protein_id=WP_002494339.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	227175	227921	.	+	.	ID=gene-RM680_RS03705;Name=RM680_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03705;old_locus_tag=RM680_03710
NZ_JAVRJI010000003.1	Protein Homology	CDS	227175	227921	.	+	0	ID=cds-WP_001832096.1;Parent=gene-RM680_RS03705;Dbxref=GenBank:WP_001832096.1;Name=WP_001832096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369082.1;locus_tag=RM680_RS03705;product=M50 family metallopeptidase;protein_id=WP_001832096.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	228086	228730	.	-	.	ID=gene-RM680_RS03710;Name=RM680_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03710;old_locus_tag=RM680_03715
NZ_JAVRJI010000003.1	Protein Homology	CDS	228086	228730	.	-	0	ID=cds-WP_001832139.1;Parent=gene-RM680_RS03710;Dbxref=GenBank:WP_001832139.1;Name=WP_001832139.1;Ontology_term=GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499198.1;locus_tag=RM680_RS03710;product=metal-dependent transcriptional regulator;protein_id=WP_001832139.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	228850	229596	.	+	.	ID=gene-RM680_RS03715;Name=RM680_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03715;old_locus_tag=RM680_03720
NZ_JAVRJI010000003.1	Protein Homology	CDS	228850	229596	.	+	0	ID=cds-WP_001832084.1;Parent=gene-RM680_RS03715;Dbxref=GenBank:WP_001832084.1;Name=WP_001832084.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457550.1;locus_tag=RM680_RS03715;product=metal ABC transporter ATP-binding protein;protein_id=WP_001832084.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	229597	230433	.	+	.	ID=gene-RM680_RS03720;Name=RM680_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03720;old_locus_tag=RM680_03725
NZ_JAVRJI010000003.1	Protein Homology	CDS	229597	230433	.	+	0	ID=cds-WP_001832042.1;Parent=gene-RM680_RS03720;Dbxref=GenBank:WP_001832042.1;Name=WP_001832042.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499196.1;locus_tag=RM680_RS03720;product=metal ABC transporter permease;protein_id=WP_001832042.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	230430	231359	.	+	.	ID=gene-RM680_RS03725;Name=mntC;gbkey=Gene;gene=mntC;gene_biotype=protein_coding;locus_tag=RM680_RS03725;old_locus_tag=RM680_03730
NZ_JAVRJI010000003.1	Protein Homology	CDS	230430	231359	.	+	0	ID=cds-WP_001832103.1;Parent=gene-RM680_RS03725;Dbxref=GenBank:WP_001832103.1;Name=WP_001832103.1;Ontology_term=GO:0015410;gbkey=CDS;gene=mntC;go_function=ABC-type manganese transporter activity|0015410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499195.1;locus_tag=RM680_RS03725;product=manganese ABC transporter substrate-binding lipoprotein MntC;protein_id=WP_001832103.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	232094	234133	.	-	.	ID=gene-RM680_RS03730;Name=RM680_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03730;old_locus_tag=RM680_03735
NZ_JAVRJI010000003.1	Protein Homology	CDS	232094	234133	.	-	0	ID=cds-WP_311563510.1;Parent=gene-RM680_RS03730;Dbxref=GenBank:WP_311563510.1;Name=WP_311563510.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452630.1;locus_tag=RM680_RS03730;product=cation:proton antiporter;protein_id=WP_311563510.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	234582	235046	.	-	.	ID=gene-RM680_RS03735;Name=mnhG2;gbkey=Gene;gene=mnhG2;gene_biotype=protein_coding;locus_tag=RM680_RS03735;old_locus_tag=RM680_03740
NZ_JAVRJI010000003.1	Protein Homology	CDS	234582	235046	.	-	0	ID=cds-WP_001832099.1;Parent=gene-RM680_RS03735;Dbxref=GenBank:WP_001832099.1;Name=WP_001832099.1;gbkey=CDS;gene=mnhG2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832099.1;locus_tag=RM680_RS03735;product=Na+/H+ antiporter Mnh2 subunit G;protein_id=WP_001832099.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	235021	235323	.	-	.	ID=gene-RM680_RS03740;Name=mnhF2;gbkey=Gene;gene=mnhF2;gene_biotype=protein_coding;locus_tag=RM680_RS03740;old_locus_tag=RM680_03745
NZ_JAVRJI010000003.1	Protein Homology	CDS	235021	235323	.	-	0	ID=cds-WP_001832031.1;Parent=gene-RM680_RS03740;Dbxref=GenBank:WP_001832031.1;Name=WP_001832031.1;gbkey=CDS;gene=mnhF2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498027.1;locus_tag=RM680_RS03740;product=Na+/H+ antiporter Mnh2 subunit F;protein_id=WP_001832031.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	235320	235802	.	-	.	ID=gene-RM680_RS03745;Name=mnhE2;gbkey=Gene;gene=mnhE2;gene_biotype=protein_coding;locus_tag=RM680_RS03745;old_locus_tag=RM680_03750
NZ_JAVRJI010000003.1	Protein Homology	CDS	235320	235802	.	-	0	ID=cds-WP_001832121.1;Parent=gene-RM680_RS03745;Dbxref=GenBank:WP_001832121.1;Name=WP_001832121.1;gbkey=CDS;gene=mnhE2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499191.1;locus_tag=RM680_RS03745;product=Na+/H+ antiporter Mnh2 subunit E;protein_id=WP_001832121.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	235799	237301	.	-	.	ID=gene-RM680_RS03750;Name=mnhD2;gbkey=Gene;gene=mnhD2;gene_biotype=protein_coding;locus_tag=RM680_RS03750;old_locus_tag=RM680_03755
NZ_JAVRJI010000003.1	Protein Homology	CDS	235799	237301	.	-	0	ID=cds-WP_011082609.1;Parent=gene-RM680_RS03750;Dbxref=GenBank:WP_011082609.1;Name=WP_011082609.1;gbkey=CDS;gene=mnhD2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082609.1;locus_tag=RM680_RS03750;product=Na+/H+ antiporter Mnh2 subunit D;protein_id=WP_011082609.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	237291	237635	.	-	.	ID=gene-RM680_RS03755;Name=mnhC2;gbkey=Gene;gene=mnhC2;gene_biotype=protein_coding;locus_tag=RM680_RS03755;old_locus_tag=RM680_03760
NZ_JAVRJI010000003.1	Protein Homology	CDS	237291	237635	.	-	0	ID=cds-WP_001832057.1;Parent=gene-RM680_RS03755;Dbxref=GenBank:WP_001832057.1;Name=WP_001832057.1;gbkey=CDS;gene=mnhC2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441278.1;locus_tag=RM680_RS03755;product=Na+/H+ antiporter Mnh2 subunit C;protein_id=WP_001832057.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	237632	238057	.	-	.	ID=gene-RM680_RS03760;Name=mnhB2;gbkey=Gene;gene=mnhB2;gene_biotype=protein_coding;locus_tag=RM680_RS03760;old_locus_tag=RM680_03765
NZ_JAVRJI010000003.1	Protein Homology	CDS	237632	238057	.	-	0	ID=cds-WP_001832105.1;Parent=gene-RM680_RS03760;Dbxref=GenBank:WP_001832105.1;Name=WP_001832105.1;gbkey=CDS;gene=mnhB2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499188.1;locus_tag=RM680_RS03760;product=Na+/H+ antiporter Mnh2 subunit B;protein_id=WP_001832105.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	238044	240446	.	-	.	ID=gene-RM680_RS03765;Name=RM680_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03765;old_locus_tag=RM680_03770
NZ_JAVRJI010000003.1	Protein Homology	CDS	238044	240446	.	-	0	ID=cds-WP_002438805.1;Parent=gene-RM680_RS03765;Dbxref=GenBank:WP_002438805.1;Name=WP_002438805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485112.1;locus_tag=RM680_RS03765;product=DUF4040 family protein;protein_id=WP_002438805.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	241170	241376	.	+	.	ID=gene-RM680_RS03770;Name=sroA;gbkey=Gene;gene=sroA;gene_biotype=protein_coding;locus_tag=RM680_RS03770;old_locus_tag=RM680_03775
NZ_JAVRJI010000003.1	Protein Homology	CDS	241170	241376	.	+	0	ID=cds-WP_001832147.1;Parent=gene-RM680_RS03770;Dbxref=GenBank:WP_001832147.1;Name=WP_001832147.1;gbkey=CDS;gene=sroA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832147.1;locus_tag=RM680_RS03770;product=sigS mRNA-stabilizing protein SroA;protein_id=WP_001832147.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	241392	241616	.	+	.	ID=gene-RM680_RS03775;Name=RM680_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03775;old_locus_tag=RM680_03780
NZ_JAVRJI010000003.1	Protein Homology	CDS	241392	241616	.	+	0	ID=cds-WP_002438795.1;Parent=gene-RM680_RS03775;Dbxref=GenBank:WP_002438795.1;Name=WP_002438795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496393.1;locus_tag=RM680_RS03775;product=DUF2922 domain-containing protein;protein_id=WP_002438795.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	241970	242899	.	+	.	ID=gene-RM680_RS03780;Name=RM680_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03780;old_locus_tag=RM680_03785
NZ_JAVRJI010000003.1	Protein Homology	CDS	241970	242899	.	+	0	ID=cds-WP_001832125.1;Parent=gene-RM680_RS03780;Dbxref=GenBank:WP_001832125.1;Name=WP_001832125.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474409.1;locus_tag=RM680_RS03780;product=DMT family transporter;protein_id=WP_001832125.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	243225	244178	.	+	.	ID=gene-RM680_RS03785;Name=RM680_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03785;old_locus_tag=RM680_03790
NZ_JAVRJI010000003.1	Protein Homology	CDS	243225	244178	.	+	0	ID=cds-WP_002438787.1;Parent=gene-RM680_RS03785;Dbxref=GenBank:WP_002438787.1;Name=WP_002438787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832066.1;locus_tag=RM680_RS03785;product=hypothetical protein;protein_id=WP_002438787.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	244591	244965	.	+	.	ID=gene-RM680_RS03790;Name=sarA;gbkey=Gene;gene=sarA;gene_biotype=protein_coding;locus_tag=RM680_RS03790;old_locus_tag=RM680_03795
NZ_JAVRJI010000003.1	Protein Homology	CDS	244591	244965	.	+	0	ID=cds-WP_001832055.1;Parent=gene-RM680_RS03790;Dbxref=GenBank:WP_001832055.1;Name=WP_001832055.1;gbkey=CDS;gene=sarA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499183.1;locus_tag=RM680_RS03790;product=global transcriptional regulator SarA;protein_id=WP_001832055.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	245138	245914	.	-	.	ID=gene-RM680_RS03795;Name=RM680_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03795;old_locus_tag=RM680_03800
NZ_JAVRJI010000003.1	Protein Homology	CDS	245138	245914	.	-	0	ID=cds-WP_001832174.1;Parent=gene-RM680_RS03795;Dbxref=GenBank:WP_001832174.1;Name=WP_001832174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485367.1;locus_tag=RM680_RS03795;product=alpha/beta fold hydrolase;protein_id=WP_001832174.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	246123	246842	.	-	.	ID=gene-RM680_RS03800;Name=RM680_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03800;old_locus_tag=RM680_03805
NZ_JAVRJI010000003.1	Protein Homology	CDS	246123	246842	.	-	0	ID=cds-WP_002456002.1;Parent=gene-RM680_RS03800;Dbxref=GenBank:WP_002456002.1;Name=WP_002456002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487621.1;locus_tag=RM680_RS03800;product=hypothetical protein;protein_id=WP_002456002.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	247087	247596	.	-	.	ID=gene-RM680_RS03805;Name=RM680_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03805;old_locus_tag=RM680_03810
NZ_JAVRJI010000003.1	Protein Homology	CDS	247087	247596	.	-	0	ID=cds-WP_002438783.1;Parent=gene-RM680_RS03805;Dbxref=GenBank:WP_002438783.1;Name=WP_002438783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491441.1;locus_tag=RM680_RS03805;product=SA0570 family protein;protein_id=WP_002438783.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	247799	248596	.	-	.	ID=gene-RM680_RS03810;Name=RM680_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03810;old_locus_tag=RM680_03815
NZ_JAVRJI010000003.1	Protein Homology	CDS	247799	248596	.	-	0	ID=cds-WP_002438782.1;Parent=gene-RM680_RS03810;Dbxref=GenBank:WP_002438782.1;Name=WP_002438782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498032.1;locus_tag=RM680_RS03810;product=alpha/beta fold hydrolase;protein_id=WP_002438782.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	248574	249302	.	-	.	ID=gene-RM680_RS03815;Name=RM680_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03815;old_locus_tag=RM680_03820
NZ_JAVRJI010000003.1	Protein Homology	CDS	248574	249302	.	-	0	ID=cds-WP_001832134.1;Parent=gene-RM680_RS03815;Dbxref=GenBank:WP_001832134.1;Name=WP_001832134.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832134.1;locus_tag=RM680_RS03815;product=HAD family hydrolase;protein_id=WP_001832134.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	249361	250305	.	-	.	ID=gene-RM680_RS03820;Name=RM680_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03820;old_locus_tag=RM680_03825
NZ_JAVRJI010000003.1	Protein Homology	CDS	249361	250305	.	-	0	ID=cds-WP_002456003.1;Parent=gene-RM680_RS03820;Dbxref=GenBank:WP_002456003.1;Name=WP_002456003.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484565.1;locus_tag=RM680_RS03820;product=FecCD family ABC transporter permease;protein_id=WP_002456003.1;transl_table=11
NZ_JAVRJI010000003.1	RefSeq	gene	250584	251471	.	-	.	ID=gene-RM680_RS03825;Name=RM680_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03825;old_locus_tag=RM680_03830
NZ_JAVRJI010000003.1	Protein Homology	CDS	250584	251471	.	-	0	ID=cds-WP_311563511.1;Parent=gene-RM680_RS03825;Dbxref=GenBank:WP_311563511.1;Name=WP_311563511.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505386.1;locus_tag=RM680_RS03825;product=ABC transporter substrate-binding protein;protein_id=WP_311563511.1;transl_table=11
##sequence-region NZ_JAVRJI010000004.1 1 231533
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000004.1	RefSeq	region	1	231533	.	+	.	ID=NZ_JAVRJI010000004.1:1..231533;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000004.1	RefSeq	gene	269	745	.	-	.	ID=gene-RM680_RS03830;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=RM680_RS03830;old_locus_tag=RM680_03835
NZ_JAVRJI010000004.1	Protein Homology	CDS	269	745	.	-	0	ID=cds-WP_001830881.1;Parent=gene-RM680_RS03830;Dbxref=GenBank:WP_001830881.1;Name=WP_001830881.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500223.1;locus_tag=RM680_RS03830;product=transcription elongation factor GreA;protein_id=WP_001830881.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	776	1399	.	-	.	ID=gene-RM680_RS03835;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=RM680_RS03835;old_locus_tag=RM680_03840
NZ_JAVRJI010000004.1	Protein Homology	CDS	776	1399	.	-	0	ID=cds-WP_001830824.1;Parent=gene-RM680_RS03835;Dbxref=GenBank:WP_001830824.1;Name=WP_001830824.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500224.1;locus_tag=RM680_RS03835;product=uridine kinase;protein_id=WP_001830824.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	1399	2667	.	-	.	ID=gene-RM680_RS03840;Name=RM680_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03840;old_locus_tag=RM680_03845
NZ_JAVRJI010000004.1	Protein Homology	CDS	1399	2667	.	-	0	ID=cds-WP_001830748.1;Parent=gene-RM680_RS03840;Dbxref=GenBank:WP_001830748.1;Name=WP_001830748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190454.1;locus_tag=RM680_RS03840;product=peptidase U32 family protein;protein_id=WP_001830748.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	2685	3608	.	-	.	ID=gene-RM680_RS03845;Name=RM680_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03845;old_locus_tag=RM680_03850
NZ_JAVRJI010000004.1	Protein Homology	CDS	2685	3608	.	-	0	ID=cds-WP_002456168.1;Parent=gene-RM680_RS03845;Dbxref=GenBank:WP_002456168.1;Name=WP_002456168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500226.1;locus_tag=RM680_RS03845;product=peptidase U32 family protein;protein_id=WP_002456168.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	3611	4246	.	-	.	ID=gene-RM680_RS03850;Name=RM680_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03850;old_locus_tag=RM680_03855
NZ_JAVRJI010000004.1	Protein Homology	CDS	3611	4246	.	-	0	ID=cds-WP_001830827.1;Parent=gene-RM680_RS03850;Dbxref=GenBank:WP_001830827.1;Name=WP_001830827.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457769.1;locus_tag=RM680_RS03850;product=O-methyltransferase;protein_id=WP_001830827.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	4675	4983	.	-	.	ID=gene-RM680_RS03855;Name=RM680_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03855;old_locus_tag=RM680_03860
NZ_JAVRJI010000004.1	Protein Homology	CDS	4675	4983	.	-	0	ID=cds-WP_001830855.1;Parent=gene-RM680_RS03855;Dbxref=GenBank:WP_001830855.1;Name=WP_001830855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500228.1;locus_tag=RM680_RS03855;product=DUF1292 domain-containing protein;protein_id=WP_001830855.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	4998	5426	.	-	.	ID=gene-RM680_RS03860;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=RM680_RS03860;old_locus_tag=RM680_03865
NZ_JAVRJI010000004.1	Protein Homology	CDS	4998	5426	.	-	0	ID=cds-WP_001830837.1;Parent=gene-RM680_RS03860;Dbxref=GenBank:WP_001830837.1;Name=WP_001830837.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830837.1;locus_tag=RM680_RS03860;product=Holliday junction resolvase RuvX;protein_id=WP_001830837.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	5428	5688	.	-	.	ID=gene-RM680_RS03865;Name=RM680_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03865;old_locus_tag=RM680_03870
NZ_JAVRJI010000004.1	Protein Homology	CDS	5428	5688	.	-	0	ID=cds-WP_001830883.1;Parent=gene-RM680_RS03865;Dbxref=GenBank:WP_001830883.1;Name=WP_001830883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489645.1;locus_tag=RM680_RS03865;product=IreB family regulatory phosphoprotein;protein_id=WP_001830883.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	5752	8382	.	-	.	ID=gene-RM680_RS03870;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=RM680_RS03870;old_locus_tag=RM680_03875
NZ_JAVRJI010000004.1	Protein Homology	CDS	5752	8382	.	-	0	ID=cds-WP_002440135.1;Parent=gene-RM680_RS03870;Dbxref=GenBank:WP_002440135.1;Name=WP_002440135.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500231.1;locus_tag=RM680_RS03870;product=alanine--tRNA ligase;protein_id=WP_002440135.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	8711	11143	.	-	.	ID=gene-RM680_RS03875;Name=recD2;gbkey=Gene;gene=recD2;gene_biotype=protein_coding;locus_tag=RM680_RS03875;old_locus_tag=RM680_03880
NZ_JAVRJI010000004.1	Protein Homology	CDS	8711	11143	.	-	0	ID=cds-WP_002440136.1;Parent=gene-RM680_RS03875;Dbxref=GenBank:WP_002440136.1;Name=WP_002440136.1;Ontology_term=GO:0006281,GO:0003677,GO:0043139;gbkey=CDS;gene=recD2;go_function=DNA binding|0003677||IEA,5'-3' DNA helicase activity|0043139||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830904.1;locus_tag=RM680_RS03875;product=SF1B family DNA helicase RecD2;protein_id=WP_002440136.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	11145	11813	.	-	.	ID=gene-RM680_RS03880;Name=RM680_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03880;old_locus_tag=RM680_03885
NZ_JAVRJI010000004.1	Protein Homology	CDS	11145	11813	.	-	0	ID=cds-WP_001832695.1;Parent=gene-RM680_RS03880;Dbxref=GenBank:WP_001832695.1;Name=WP_001832695.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494289.1;locus_tag=RM680_RS03880;product=tetratricopeptide repeat protein;protein_id=WP_001832695.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	11976	13094	.	-	.	ID=gene-RM680_RS03885;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=RM680_RS03885;old_locus_tag=RM680_03890
NZ_JAVRJI010000004.1	Protein Homology	CDS	11976	13094	.	-	0	ID=cds-WP_001830892.1;Parent=gene-RM680_RS03885;Dbxref=GenBank:WP_001830892.1;Name=WP_001830892.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830892.1;locus_tag=RM680_RS03885;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_001830892.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	13094	14236	.	-	.	ID=gene-RM680_RS03890;Name=RM680_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03890;old_locus_tag=RM680_03895
NZ_JAVRJI010000004.1	Protein Homology	CDS	13094	14236	.	-	0	ID=cds-WP_001830848.1;Parent=gene-RM680_RS03890;Dbxref=GenBank:WP_001830848.1;Name=WP_001830848.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500236.1;locus_tag=RM680_RS03890;product=cysteine desulfurase family protein;protein_id=WP_001830848.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	14479	15474	.	+	.	ID=gene-RM680_RS03895;Name=RM680_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03895;old_locus_tag=RM680_03900
NZ_JAVRJI010000004.1	Protein Homology	CDS	14479	15474	.	+	0	ID=cds-WP_001830781.1;Parent=gene-RM680_RS03895;Dbxref=GenBank:WP_001830781.1;Name=WP_001830781.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464637.1;locus_tag=RM680_RS03895;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_001830781.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	15674	15817	.	-	.	ID=gene-RM680_RS03900;Name=RM680_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03900;old_locus_tag=RM680_03905
NZ_JAVRJI010000004.1	Protein Homology	CDS	15674	15817	.	-	0	ID=cds-WP_001830746.1;Parent=gene-RM680_RS03900;Dbxref=GenBank:WP_001830746.1;Name=WP_001830746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500462.1;locus_tag=RM680_RS03900;product=SAS049 family protein;protein_id=WP_001830746.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	16003	16425	.	-	.	ID=gene-RM680_RS03905;Name=cymR;gbkey=Gene;gene=cymR;gene_biotype=protein_coding;locus_tag=RM680_RS03905;old_locus_tag=RM680_03910
NZ_JAVRJI010000004.1	Protein Homology	CDS	16003	16425	.	-	0	ID=cds-WP_001830806.1;Parent=gene-RM680_RS03905;Dbxref=GenBank:WP_001830806.1;Name=WP_001830806.1;gbkey=CDS;gene=cymR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458938.1;locus_tag=RM680_RS03905;product=cysteine metabolism transcriptional regulator CymR;protein_id=WP_001830806.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	16511	17782	.	+	.	ID=gene-RM680_RS03910;Name=RM680_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03910;old_locus_tag=RM680_03915
NZ_JAVRJI010000004.1	Protein Homology	CDS	16511	17782	.	+	0	ID=cds-WP_001830871.1;Parent=gene-RM680_RS03910;Dbxref=GenBank:WP_001830871.1;Name=WP_001830871.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362025.1;locus_tag=RM680_RS03910;product=replication-associated recombination protein A;protein_id=WP_001830871.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	17976	18752	.	-	.	ID=gene-RM680_RS03915;Name=RM680_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03915;old_locus_tag=RM680_03920
NZ_JAVRJI010000004.1	Protein Homology	CDS	17976	18752	.	-	0	ID=cds-WP_001830777.1;Parent=gene-RM680_RS03915;Dbxref=GenBank:WP_001830777.1;Name=WP_001830777.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493905.1;locus_tag=RM680_RS03915;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_001830777.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	18842	19032	.	-	.	ID=gene-RM680_RS03920;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=RM680_RS03920;old_locus_tag=RM680_03925
NZ_JAVRJI010000004.1	cmsearch	ncRNA	18842	19032	.	-	.	ID=rna-RM680_RS03920;Parent=gene-RM680_RS03920;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS03920;product=6S RNA
NZ_JAVRJI010000004.1	cmsearch	exon	18842	19032	.	-	.	ID=exon-RM680_RS03920-1;Parent=rna-RM680_RS03920;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS03920;product=6S RNA
NZ_JAVRJI010000004.1	RefSeq	gene	19366	21132	.	-	.	ID=gene-RM680_RS03925;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=RM680_RS03925;old_locus_tag=RM680_03930
NZ_JAVRJI010000004.1	Protein Homology	CDS	19366	21132	.	-	0	ID=cds-WP_001830852.1;Parent=gene-RM680_RS03925;Dbxref=GenBank:WP_001830852.1;Name=WP_001830852.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500245.1;locus_tag=RM680_RS03925;product=aspartate--tRNA ligase;protein_id=WP_001830852.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	21135	22409	.	-	.	ID=gene-RM680_RS03930;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=RM680_RS03930;old_locus_tag=RM680_03935
NZ_JAVRJI010000004.1	Protein Homology	CDS	21135	22409	.	-	0	ID=cds-WP_001830876.1;Parent=gene-RM680_RS03930;Dbxref=GenBank:WP_001830876.1;Name=WP_001830876.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491142.1;locus_tag=RM680_RS03930;product=histidine--tRNA ligase;protein_id=WP_001830876.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	22781	23656	.	-	.	ID=gene-RM680_RS03935;Name=RM680_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03935;old_locus_tag=RM680_03940
NZ_JAVRJI010000004.1	Protein Homology	CDS	22781	23656	.	-	0	ID=cds-WP_002470411.1;Parent=gene-RM680_RS03935;Dbxref=GenBank:WP_002470411.1;Name=WP_002470411.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457780.1;locus_tag=RM680_RS03935;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_002470411.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	23653	24105	.	-	.	ID=gene-RM680_RS03940;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=RM680_RS03940;old_locus_tag=RM680_03945
NZ_JAVRJI010000004.1	Protein Homology	CDS	23653	24105	.	-	0	ID=cds-WP_001830766.1;Parent=gene-RM680_RS03940;Dbxref=GenBank:WP_001830766.1;Name=WP_001830766.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495726.1;locus_tag=RM680_RS03940;product=D-aminoacyl-tRNA deacylase;protein_id=WP_001830766.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	24119	26308	.	-	.	ID=gene-RM680_RS03945;Name=RM680_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03945;old_locus_tag=RM680_03950
NZ_JAVRJI010000004.1	Protein Homology	CDS	24119	26308	.	-	0	ID=cds-WP_001832683.1;Parent=gene-RM680_RS03945;Dbxref=GenBank:WP_001832683.1;Name=WP_001832683.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500249.1;locus_tag=RM680_RS03945;product=RelA/SpoT family protein;protein_id=WP_001832683.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	26827	27345	.	-	.	ID=gene-RM680_RS03950;Name=RM680_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03950;old_locus_tag=RM680_03955
NZ_JAVRJI010000004.1	Protein Homology	CDS	26827	27345	.	-	0	ID=cds-WP_001832698.1;Parent=gene-RM680_RS03950;Dbxref=GenBank:WP_001832698.1;Name=WP_001832698.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009559512.1;locus_tag=RM680_RS03950;product=adenine phosphoribosyltransferase;protein_id=WP_001832698.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	27364	29637	.	-	.	ID=gene-RM680_RS03955;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=RM680_RS03955;old_locus_tag=RM680_03960
NZ_JAVRJI010000004.1	Protein Homology	CDS	27364	29637	.	-	0	ID=cds-WP_002440152.1;Parent=gene-RM680_RS03955;Dbxref=GenBank:WP_002440152.1;Name=WP_002440152.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464636.1;locus_tag=RM680_RS03955;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_002440152.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	30382	32673	.	-	.	ID=gene-RM680_RS03960;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=RM680_RS03960;old_locus_tag=RM680_03965
NZ_JAVRJI010000004.1	Protein Homology	CDS	30382	32673	.	-	0	ID=cds-WP_001830863.1;Parent=gene-RM680_RS03960;Dbxref=GenBank:WP_001830863.1;Name=WP_001830863.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500252.2;locus_tag=RM680_RS03960;product=protein translocase subunit SecDF;protein_id=WP_001830863.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	33012	33272	.	-	.	ID=gene-RM680_RS03965;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=RM680_RS03965;old_locus_tag=RM680_03970
NZ_JAVRJI010000004.1	Protein Homology	CDS	33012	33272	.	-	0	ID=cds-WP_001830800.1;Parent=gene-RM680_RS03965;Dbxref=GenBank:WP_001830800.1;Name=WP_001830800.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464991.1;locus_tag=RM680_RS03965;product=preprotein translocase subunit YajC;protein_id=WP_001830800.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	33288	34427	.	-	.	ID=gene-RM680_RS03970;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=RM680_RS03970;old_locus_tag=RM680_03975
NZ_JAVRJI010000004.1	Protein Homology	CDS	33288	34427	.	-	0	ID=cds-WP_001830840.1;Parent=gene-RM680_RS03970;Dbxref=GenBank:WP_001830840.1;Name=WP_001830840.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425271.1;locus_tag=RM680_RS03970;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_001830840.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	34448	35473	.	-	.	ID=gene-RM680_RS03975;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=RM680_RS03975;old_locus_tag=RM680_03980
NZ_JAVRJI010000004.1	Protein Homology	CDS	34448	35473	.	-	0	ID=cds-WP_001830755.1;Parent=gene-RM680_RS03975;Dbxref=GenBank:WP_001830755.1;Name=WP_001830755.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500255.1;locus_tag=RM680_RS03975;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_001830755.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	35475	36479	.	-	.	ID=gene-RM680_RS03980;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=RM680_RS03980;old_locus_tag=RM680_03985
NZ_JAVRJI010000004.1	Protein Homology	CDS	35475	36479	.	-	0	ID=cds-WP_001830787.1;Parent=gene-RM680_RS03980;Dbxref=GenBank:WP_001830787.1;Name=WP_001830787.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500256.1;locus_tag=RM680_RS03980;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_001830787.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	36493	37095	.	-	.	ID=gene-RM680_RS03985;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=RM680_RS03985;old_locus_tag=RM680_03990
NZ_JAVRJI010000004.1	Protein Homology	CDS	36493	37095	.	-	0	ID=cds-WP_001830895.1;Parent=gene-RM680_RS03985;Dbxref=GenBank:WP_001830895.1;Name=WP_001830895.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500257.1;locus_tag=RM680_RS03985;product=Holliday junction branch migration protein RuvA;protein_id=WP_001830895.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	37108	37563	.	-	.	ID=gene-RM680_RS03990;Name=RM680_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS03990;old_locus_tag=RM680_03995
NZ_JAVRJI010000004.1	Protein Homology	CDS	37108	37563	.	-	0	ID=cds-WP_001830784.1;Parent=gene-RM680_RS03990;Dbxref=GenBank:WP_001830784.1;Name=WP_001830784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275576.1;locus_tag=RM680_RS03990;product=ACT domain-containing protein;protein_id=WP_001830784.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	37575	38867	.	-	.	ID=gene-RM680_RS03995;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=RM680_RS03995;old_locus_tag=RM680_04000
NZ_JAVRJI010000004.1	Protein Homology	CDS	37575	38867	.	-	0	ID=cds-WP_002440162.1;Parent=gene-RM680_RS03995;Dbxref=GenBank:WP_002440162.1;Name=WP_002440162.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444729.1;locus_tag=RM680_RS03995;product=GTPase ObgE;protein_id=WP_002440162.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	39013	39297	.	-	.	ID=gene-RM680_RS04000;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=RM680_RS04000;old_locus_tag=RM680_04005
NZ_JAVRJI010000004.1	Protein Homology	CDS	39013	39297	.	-	0	ID=cds-WP_001830822.1;Parent=gene-RM680_RS04000;Dbxref=GenBank:WP_001830822.1;Name=WP_001830822.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009382703.1;locus_tag=RM680_RS04000;product=50S ribosomal protein L27;protein_id=WP_001830822.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	39309	39629	.	-	.	ID=gene-RM680_RS04005;Name=RM680_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04005;old_locus_tag=RM680_04010
NZ_JAVRJI010000004.1	Protein Homology	CDS	39309	39629	.	-	0	ID=cds-WP_001830797.1;Parent=gene-RM680_RS04005;Dbxref=GenBank:WP_001830797.1;Name=WP_001830797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633692.1;locus_tag=RM680_RS04005;product=ribosomal-processing cysteine protease Prp;protein_id=WP_001830797.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	39634	39942	.	-	.	ID=gene-RM680_RS04010;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=RM680_RS04010;old_locus_tag=RM680_04015
NZ_JAVRJI010000004.1	Protein Homology	CDS	39634	39942	.	-	0	ID=cds-WP_001830820.1;Parent=gene-RM680_RS04010;Dbxref=GenBank:WP_001830820.1;Name=WP_001830820.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1;locus_tag=RM680_RS04010;product=50S ribosomal protein L21;protein_id=WP_001830820.1;transl_table=11
NZ_JAVRJI010000004.1	cmsearch	sequence_feature	39955	40031	.	-	.	ID=id-NZ_JAVRJI010000004.1:39955..40031;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_JAVRJI010000004.1	RefSeq	gene	40064	40585	.	-	.	ID=gene-RM680_RS04015;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=RM680_RS04015;old_locus_tag=RM680_04020
NZ_JAVRJI010000004.1	Protein Homology	CDS	40064	40585	.	-	0	ID=cds-WP_001830764.1;Parent=gene-RM680_RS04015;Dbxref=GenBank:WP_001830764.1;Name=WP_001830764.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830764.1;locus_tag=RM680_RS04015;product=rod shape-determining protein MreD;protein_id=WP_001830764.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	40585	41424	.	-	.	ID=gene-RM680_RS04020;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=RM680_RS04020;old_locus_tag=RM680_04025
NZ_JAVRJI010000004.1	Protein Homology	CDS	40585	41424	.	-	0	ID=cds-WP_002440165.1;Parent=gene-RM680_RS04020;Dbxref=GenBank:WP_002440165.1;Name=WP_002440165.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012083861.1;locus_tag=RM680_RS04020;product=rod shape-determining protein MreC;protein_id=WP_002440165.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	41831	41971	.	-	.	ID=gene-RM680_RS04025;Name=RM680_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04025;old_locus_tag=RM680_04030
NZ_JAVRJI010000004.1	Protein Homology	CDS	41831	41971	.	-	0	ID=cds-WP_001830756.1;Parent=gene-RM680_RS04025;Dbxref=GenBank:WP_001830756.1;Name=WP_001830756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830756.1;locus_tag=RM680_RS04025;product=hypothetical protein;protein_id=WP_001830756.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	42055	42540	.	-	.	ID=gene-RM680_RS04030;Name=RM680_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04030;old_locus_tag=RM680_04035
NZ_JAVRJI010000004.1	Protein Homology	CDS	42055	42540	.	-	0	ID=cds-WP_001832708.1;Parent=gene-RM680_RS04030;Dbxref=GenBank:WP_001832708.1;Name=WP_001832708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497965.1;locus_tag=RM680_RS04030;product=DUF4930 family protein;protein_id=WP_001832708.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	42705	42884	.	+	.	ID=gene-RM680_RS04035;Name=RM680_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04035;old_locus_tag=RM680_04040
NZ_JAVRJI010000004.1	Protein Homology	CDS	42705	42884	.	+	0	ID=cds-WP_001830753.1;Parent=gene-RM680_RS04035;Dbxref=GenBank:WP_001830753.1;Name=WP_001830753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446629.1;locus_tag=RM680_RS04035;product=hypothetical protein;protein_id=WP_001830753.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	42948	43628	.	-	.	ID=gene-RM680_RS04040;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=RM680_RS04040;old_locus_tag=RM680_04045
NZ_JAVRJI010000004.1	Protein Homology	CDS	42948	43628	.	-	0	ID=cds-WP_001830861.1;Parent=gene-RM680_RS04040;Dbxref=GenBank:WP_001830861.1;Name=WP_001830861.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830861.1;locus_tag=RM680_RS04040;product=RadC family protein;protein_id=WP_001830861.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	43625	44335	.	-	.	ID=gene-RM680_RS04045;Name=RM680_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04045;old_locus_tag=RM680_04050
NZ_JAVRJI010000004.1	Protein Homology	CDS	43625	44335	.	-	0	ID=cds-WP_002440170.1;Parent=gene-RM680_RS04045;Dbxref=GenBank:WP_002440170.1;Name=WP_002440170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502356.1;locus_tag=RM680_RS04045;product=A24 family peptidase;protein_id=WP_002440170.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	44519	45784	.	-	.	ID=gene-RM680_RS04050;Name=RM680_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04050;old_locus_tag=RM680_04055
NZ_JAVRJI010000004.1	Protein Homology	CDS	44519	45784	.	-	0	ID=cds-WP_002440172.1;Parent=gene-RM680_RS04050;Dbxref=GenBank:WP_002440172.1;Name=WP_002440172.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457793.1;locus_tag=RM680_RS04050;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WP_002440172.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	45795	48425	.	-	.	ID=gene-RM680_RS04055;Name=RM680_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04055;old_locus_tag=RM680_04060
NZ_JAVRJI010000004.1	Protein Homology	CDS	45795	48425	.	-	0	ID=cds-WP_001830862.1;Parent=gene-RM680_RS04055;Dbxref=GenBank:WP_001830862.1;Name=WP_001830862.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500272.1;locus_tag=RM680_RS04055;product=valine--tRNA ligase;protein_id=WP_001830862.1;transl_table=11
NZ_JAVRJI010000004.1	cmsearch	binding_site	48469	48704	.	-	.	ID=id-NZ_JAVRJI010000004.1:48469..48704;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_JAVRJI010000004.1	RefSeq	gene	48768	49328	.	+	.	ID=gene-RM680_RS04060;Name=RM680_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04060;old_locus_tag=RM680_04065
NZ_JAVRJI010000004.1	Protein Homology	CDS	48768	49328	.	+	0	ID=cds-WP_001830783.1;Parent=gene-RM680_RS04060;Dbxref=GenBank:WP_001830783.1;Name=WP_001830783.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464987.1;locus_tag=RM680_RS04060;product=DNA-3-methyladenine glycosylase I;protein_id=WP_001830783.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	49495	50562	.	-	.	ID=gene-RM680_RS04065;Name=RM680_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04065;old_locus_tag=RM680_04070
NZ_JAVRJI010000004.1	Protein Homology	CDS	49495	50562	.	-	0	ID=cds-WP_001830878.1;Parent=gene-RM680_RS04065;Dbxref=GenBank:WP_001830878.1;Name=WP_001830878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503543.1;locus_tag=RM680_RS04065;product=AbrB family transcriptional regulator;protein_id=WP_001830878.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	50969	52252	.	-	.	ID=gene-RM680_RS04070;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=RM680_RS04070;old_locus_tag=RM680_04075
NZ_JAVRJI010000004.1	Protein Homology	CDS	50969	52252	.	-	0	ID=cds-WP_002456470.1;Parent=gene-RM680_RS04070;Dbxref=GenBank:WP_002456470.1;Name=WP_002456470.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275558.1;locus_tag=RM680_RS04070;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_002456470.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	52276	53250	.	-	.	ID=gene-RM680_RS04075;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=RM680_RS04075;old_locus_tag=RM680_04080
NZ_JAVRJI010000004.1	Protein Homology	CDS	52276	53250	.	-	0	ID=cds-WP_002440176.1;Parent=gene-RM680_RS04075;Dbxref=GenBank:WP_002440176.1;Name=WP_002440176.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001633925.1;locus_tag=RM680_RS04075;product=porphobilinogen synthase;protein_id=WP_002440176.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	53240	53920	.	-	.	ID=gene-RM680_RS04080;Name=RM680_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04080;old_locus_tag=RM680_04085
NZ_JAVRJI010000004.1	Protein Homology	CDS	53240	53920	.	-	0	ID=cds-WP_002456469.1;Parent=gene-RM680_RS04080;Dbxref=GenBank:WP_002456469.1;Name=WP_002456469.1;Ontology_term=GO:0006780,GO:0006782,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,protoporphyrinogen IX biosynthetic process|0006782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497970.1;locus_tag=RM680_RS04080;product=uroporphyrinogen-III synthase;protein_id=WP_002456469.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	53954	54880	.	-	.	ID=gene-RM680_RS04085;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=RM680_RS04085;old_locus_tag=RM680_04090
NZ_JAVRJI010000004.1	Protein Homology	CDS	53954	54880	.	-	0	ID=cds-WP_001830811.1;Parent=gene-RM680_RS04085;Dbxref=GenBank:WP_001830811.1;Name=WP_001830811.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474759.1;locus_tag=RM680_RS04085;product=hydroxymethylbilane synthase;protein_id=WP_001830811.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	54934	55746	.	-	.	ID=gene-RM680_RS04090;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=RM680_RS04090;old_locus_tag=RM680_04095
NZ_JAVRJI010000004.1	Protein Homology	CDS	54934	55746	.	-	0	ID=cds-WP_001832714.1;Parent=gene-RM680_RS04090;Dbxref=GenBank:WP_001832714.1;Name=WP_001832714.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457800.1;locus_tag=RM680_RS04090;product=cytochrome c biogenesis protein;protein_id=WP_001832714.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	55768	57114	.	-	.	ID=gene-RM680_RS04095;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=RM680_RS04095;old_locus_tag=RM680_04100
NZ_JAVRJI010000004.1	Protein Homology	CDS	55768	57114	.	-	0	ID=cds-WP_002485649.1;Parent=gene-RM680_RS04095;Dbxref=GenBank:WP_002485649.1;Name=WP_002485649.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500281.1;locus_tag=RM680_RS04095;product=glutamyl-tRNA reductase;protein_id=WP_002485649.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	57284	57871	.	-	.	ID=gene-RM680_RS04100;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=RM680_RS04100;old_locus_tag=RM680_04105
NZ_JAVRJI010000004.1	Protein Homology	CDS	57284	57871	.	-	0	ID=cds-WP_001830838.1;Parent=gene-RM680_RS04100;Dbxref=GenBank:WP_001830838.1;Name=WP_001830838.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275552.1;locus_tag=RM680_RS04100;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_001830838.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	57983	59245	.	-	.	ID=gene-RM680_RS04105;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=RM680_RS04105;old_locus_tag=RM680_04110
NZ_JAVRJI010000004.1	Protein Homology	CDS	57983	59245	.	-	0	ID=cds-WP_001830765.1;Parent=gene-RM680_RS04105;Dbxref=GenBank:WP_001830765.1;Name=WP_001830765.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830765.1;locus_tag=RM680_RS04105;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_001830765.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	59532	60833	.	-	.	ID=gene-RM680_RS04110;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=RM680_RS04110;old_locus_tag=RM680_04115
NZ_JAVRJI010000004.1	Protein Homology	CDS	59532	60833	.	-	0	ID=cds-WP_001830810.1;Parent=gene-RM680_RS04110;Dbxref=GenBank:WP_001830810.1;Name=WP_001830810.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500284.1;locus_tag=RM680_RS04110;product=trigger factor;protein_id=WP_001830810.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	60994	61917	.	-	.	ID=gene-RM680_RS04115;Name=RM680_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04115;old_locus_tag=RM680_04120
NZ_JAVRJI010000004.1	Protein Homology	CDS	60994	61917	.	-	0	ID=cds-WP_001830807.1;Parent=gene-RM680_RS04115;Dbxref=GenBank:WP_001830807.1;Name=WP_001830807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485659.1;locus_tag=RM680_RS04115;product=hypothetical protein;protein_id=WP_001830807.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	61934	62545	.	-	.	ID=gene-RM680_RS04120;Name=RM680_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04120;old_locus_tag=RM680_04125
NZ_JAVRJI010000004.1	Protein Homology	CDS	61934	62545	.	-	0	ID=cds-WP_001830874.1;Parent=gene-RM680_RS04120;Dbxref=GenBank:WP_001830874.1;Name=WP_001830874.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464981.1;locus_tag=RM680_RS04120;product=NUDIX domain-containing protein;protein_id=WP_001830874.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	62963	63319	.	-	.	ID=gene-RM680_RS04125;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=RM680_RS04125;old_locus_tag=RM680_04130
NZ_JAVRJI010000004.1	Protein Homology	CDS	62963	63319	.	-	0	ID=cds-WP_001830839.1;Parent=gene-RM680_RS04125;Dbxref=GenBank:WP_001830839.1;Name=WP_001830839.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500289.1;locus_tag=RM680_RS04125;product=50S ribosomal protein L20;protein_id=WP_001830839.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	63371	63571	.	-	.	ID=gene-RM680_RS04130;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=RM680_RS04130;old_locus_tag=RM680_04135
NZ_JAVRJI010000004.1	Protein Homology	CDS	63371	63571	.	-	0	ID=cds-WP_001830767.1;Parent=gene-RM680_RS04130;Dbxref=GenBank:WP_001830767.1;Name=WP_001830767.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1;locus_tag=RM680_RS04130;product=50S ribosomal protein L35;protein_id=WP_001830767.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	63599	64126	.	-	.	ID=gene-RM680_RS04135;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=RM680_RS04135;old_locus_tag=RM680_04140
NZ_JAVRJI010000004.1	Protein Homology	CDS	63599	64126	.	-	0	ID=cds-WP_001830789.1;Parent=gene-RM680_RS04135;Dbxref=GenBank:WP_001830789.1;Name=WP_001830789.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500291.1;locus_tag=RM680_RS04135;product=translation initiation factor IF-3;protein_id=WP_001830789.1;transl_table=11
NZ_JAVRJI010000004.1	cmsearch	sequence_feature	64153	64276	.	-	.	ID=id-NZ_JAVRJI010000004.1:64153..64276;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_JAVRJI010000004.1	RefSeq	gene	64334	65836	.	-	.	ID=gene-RM680_RS04140;Name=RM680_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04140;old_locus_tag=RM680_04145
NZ_JAVRJI010000004.1	Protein Homology	CDS	64334	65836	.	-	0	ID=cds-WP_001830900.1;Parent=gene-RM680_RS04140;Dbxref=GenBank:WP_001830900.1;Name=WP_001830900.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502349.1;locus_tag=RM680_RS04140;product=amino acid permease;protein_id=WP_001830900.1;transl_table=11
NZ_JAVRJI010000004.1	cmsearch	riboswitch	66042	66217	.	-	.	ID=id-NZ_JAVRJI010000004.1:66042..66217;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000004.1	RefSeq	gene	66265	68202	.	-	.	ID=gene-RM680_RS04145;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=RM680_RS04145;old_locus_tag=RM680_04150
NZ_JAVRJI010000004.1	Protein Homology	CDS	66265	68202	.	-	0	ID=cds-WP_020368249.1;Parent=gene-RM680_RS04145;Dbxref=GenBank:WP_020368249.1;Name=WP_020368249.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500293.1;locus_tag=RM680_RS04145;product=threonine--tRNA ligase;protein_id=WP_020368249.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	68555	69475	.	-	.	ID=gene-RM680_RS04150;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=RM680_RS04150;old_locus_tag=RM680_04155
NZ_JAVRJI010000004.1	Protein Homology	CDS	68555	69475	.	-	0	ID=cds-WP_001830772.1;Parent=gene-RM680_RS04150;Dbxref=GenBank:WP_001830772.1;Name=WP_001830772.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464979.1;locus_tag=RM680_RS04150;product=primosomal protein DnaI;protein_id=WP_001830772.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	69475	70845	.	-	.	ID=gene-RM680_RS04155;Name=RM680_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04155;old_locus_tag=RM680_04160
NZ_JAVRJI010000004.1	Protein Homology	CDS	69475	70845	.	-	0	ID=cds-WP_020368250.1;Parent=gene-RM680_RS04155;Dbxref=GenBank:WP_020368250.1;Name=WP_020368250.1;Ontology_term=GO:0006260,GO:0003677,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457808.1;locus_tag=RM680_RS04155;product=replication initiation and membrane attachment family protein;protein_id=WP_020368250.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	70846	71316	.	-	.	ID=gene-RM680_RS04160;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=RM680_RS04160;old_locus_tag=RM680_04165
NZ_JAVRJI010000004.1	Protein Homology	CDS	70846	71316	.	-	0	ID=cds-WP_001830825.1;Parent=gene-RM680_RS04160;Dbxref=GenBank:WP_001830825.1;Name=WP_001830825.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830825.1;locus_tag=RM680_RS04160;product=transcriptional regulator NrdR;protein_id=WP_001830825.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	71836	72861	.	-	.	ID=gene-RM680_RS04165;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=RM680_RS04165;old_locus_tag=RM680_04170
NZ_JAVRJI010000004.1	Protein Homology	CDS	71836	72861	.	-	0	ID=cds-WP_002446650.1;Parent=gene-RM680_RS04165;Dbxref=GenBank:WP_002446650.1;Name=WP_002446650.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361946.1;locus_tag=RM680_RS04165;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002446650.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	pseudogene	72967	73350	.	-	.	ID=gene-RM680_RS04170;Name=RM680_RS04170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS04170;old_locus_tag=RM680_04175;partial=true;pseudo=true;start_range=.,72967
NZ_JAVRJI010000004.1	Protein Homology	CDS	72967	73350	.	-	0	ID=cds-RM680_RS04170;Parent=gene-RM680_RS04170;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494449.1;locus_tag=RM680_RS04170;partial=true;product=transposase;pseudo=true;start_range=.,72967;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	73705	74316	.	-	.	ID=gene-RM680_RS04175;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=RM680_RS04175;old_locus_tag=RM680_04180
NZ_JAVRJI010000004.1	Protein Homology	CDS	73705	74316	.	-	0	ID=cds-WP_001830774.1;Parent=gene-RM680_RS04175;Dbxref=GenBank:WP_001830774.1;Name=WP_001830774.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485286.1;locus_tag=RM680_RS04175;product=dephospho-CoA kinase;protein_id=WP_001830774.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	74332	75204	.	-	.	ID=gene-RM680_RS04180;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=RM680_RS04180;old_locus_tag=RM680_04185
NZ_JAVRJI010000004.1	Protein Homology	CDS	74332	75204	.	-	0	ID=cds-WP_001830823.1;Parent=gene-RM680_RS04180;Dbxref=GenBank:WP_001830823.1;Name=WP_001830823.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473981.1;locus_tag=RM680_RS04180;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_001830823.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	75220	77850	.	-	.	ID=gene-RM680_RS04185;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=RM680_RS04185;old_locus_tag=RM680_04190
NZ_JAVRJI010000004.1	Protein Homology	CDS	75220	77850	.	-	0	ID=cds-WP_002470417.1;Parent=gene-RM680_RS04185;Dbxref=GenBank:WP_002470417.1;Name=WP_002470417.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500301.1;locus_tag=RM680_RS04185;product=DNA polymerase I;protein_id=WP_002470417.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	78145	79842	.	-	.	ID=gene-RM680_RS04190;Name=pnpS;gbkey=Gene;gene=pnpS;gene_biotype=protein_coding;locus_tag=RM680_RS04190;old_locus_tag=RM680_04195
NZ_JAVRJI010000004.1	Protein Homology	CDS	78145	79842	.	-	0	ID=cds-WP_002484466.1;Parent=gene-RM680_RS04190;Dbxref=GenBank:WP_002484466.1;Name=WP_002484466.1;Ontology_term=GO:0016310,GO:0000155;gbkey=CDS;gene=pnpS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486197.1;locus_tag=RM680_RS04190;product=two-component system histidine kinase PnpS;protein_id=WP_002484466.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	79842	80552	.	-	.	ID=gene-RM680_RS04195;Name=RM680_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04195;old_locus_tag=RM680_04200
NZ_JAVRJI010000004.1	Protein Homology	CDS	79842	80552	.	-	0	ID=cds-WP_001830897.1;Parent=gene-RM680_RS04195;Dbxref=GenBank:WP_001830897.1;Name=WP_001830897.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176131.1;locus_tag=RM680_RS04195;product=response regulator transcription factor;protein_id=WP_001830897.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	80868	82136	.	-	.	ID=gene-RM680_RS04200;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=RM680_RS04200;old_locus_tag=RM680_04205
NZ_JAVRJI010000004.1	Protein Homology	CDS	80868	82136	.	-	0	ID=cds-WP_001830826.1;Parent=gene-RM680_RS04200;Dbxref=GenBank:WP_001830826.1;Name=WP_001830826.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500306.1;locus_tag=RM680_RS04200;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_001830826.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	82179	83300	.	-	.	ID=gene-RM680_RS04205;Name=RM680_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04205;old_locus_tag=RM680_04210
NZ_JAVRJI010000004.1	Protein Homology	CDS	82179	83300	.	-	0	ID=cds-WP_001830889.1;Parent=gene-RM680_RS04205;Dbxref=GenBank:WP_001830889.1;Name=WP_001830889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502341.1;locus_tag=RM680_RS04205;product=citrate synthase;protein_id=WP_001830889.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	83648	85006	.	+	.	ID=gene-RM680_RS04210;Name=RM680_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04210;old_locus_tag=RM680_04215
NZ_JAVRJI010000004.1	Protein Homology	CDS	83648	85006	.	+	0	ID=cds-WP_002486314.1;Parent=gene-RM680_RS04210;Dbxref=GenBank:WP_002486314.1;Name=WP_002486314.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494481.1;locus_tag=RM680_RS04210;product=amino acid permease;protein_id=WP_002486314.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	85387	87144	.	-	.	ID=gene-RM680_RS04215;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=RM680_RS04215;old_locus_tag=RM680_04220
NZ_JAVRJI010000004.1	Protein Homology	CDS	85387	87144	.	-	0	ID=cds-WP_020368408.1;Parent=gene-RM680_RS04215;Dbxref=GenBank:WP_020368408.1;Name=WP_020368408.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500311.1;locus_tag=RM680_RS04215;product=pyruvate kinase;protein_id=WP_020368408.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	87168	88136	.	-	.	ID=gene-RM680_RS04220;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=RM680_RS04220;old_locus_tag=RM680_04225
NZ_JAVRJI010000004.1	Protein Homology	CDS	87168	88136	.	-	0	ID=cds-WP_002505771.1;Parent=gene-RM680_RS04220;Dbxref=GenBank:WP_002505771.1;Name=WP_002505771.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462395.1;locus_tag=RM680_RS04220;product=6-phosphofructokinase;protein_id=WP_002505771.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	88314	89258	.	-	.	ID=gene-RM680_RS04225;Name=RM680_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04225;old_locus_tag=RM680_04230
NZ_JAVRJI010000004.1	Protein Homology	CDS	88314	89258	.	-	0	ID=cds-WP_002440194.1;Parent=gene-RM680_RS04225;Dbxref=GenBank:WP_002440194.1;Name=WP_002440194.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500313.1;locus_tag=RM680_RS04225;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_002440194.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	89258	90115	.	-	.	ID=gene-RM680_RS04230;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=RM680_RS04230;old_locus_tag=RM680_04235
NZ_JAVRJI010000004.1	Protein Homology	CDS	89258	90115	.	-	0	ID=cds-WP_002440197.1;Parent=gene-RM680_RS04230;Dbxref=GenBank:WP_002440197.1;Name=WP_002440197.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440197.1;locus_tag=RM680_RS04230;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_002440197.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	90214	91443	.	-	.	ID=gene-RM680_RS04235;Name=RM680_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04235;old_locus_tag=RM680_04240
NZ_JAVRJI010000004.1	Protein Homology	CDS	90214	91443	.	-	0	ID=cds-WP_002440198.1;Parent=gene-RM680_RS04235;Dbxref=GenBank:WP_002440198.1;Name=WP_002440198.1;Ontology_term=GO:0004471,GO:0004473,GO:0046872,GO:0051287;gbkey=CDS;go_function=malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,malate dehydrogenase (decarboxylating) (NADP+) activity|0004473||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500315.1;locus_tag=RM680_RS04235;product=NAD(P)-dependent malic enzyme;protein_id=WP_002440198.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	91747	94944	.	-	.	ID=gene-RM680_RS04240;Name=RM680_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04240;old_locus_tag=RM680_04245
NZ_JAVRJI010000004.1	Protein Homology	CDS	91747	94944	.	-	0	ID=cds-WP_002486313.1;Parent=gene-RM680_RS04240;Dbxref=GenBank:WP_002486313.1;Name=WP_002486313.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485290.1;locus_tag=RM680_RS04240;product=DNA polymerase III subunit alpha;protein_id=WP_002486313.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	94968	95906	.	-	.	ID=gene-RM680_RS04245;Name=RM680_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04245;old_locus_tag=RM680_04250
NZ_JAVRJI010000004.1	Protein Homology	CDS	94968	95906	.	-	0	ID=cds-WP_001830818.1;Parent=gene-RM680_RS04245;Dbxref=GenBank:WP_001830818.1;Name=WP_001830818.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440202.1;locus_tag=RM680_RS04245;product=DHH family phosphoesterase;protein_id=WP_001830818.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	95940	97238	.	-	.	ID=gene-RM680_RS04250;Name=RM680_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04250;old_locus_tag=RM680_04255
NZ_JAVRJI010000004.1	Protein Homology	CDS	95940	97238	.	-	0	ID=cds-WP_001830890.1;Parent=gene-RM680_RS04250;Dbxref=GenBank:WP_001830890.1;Name=WP_001830890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012096478.1;locus_tag=RM680_RS04250;product=DRTGG domain-containing protein;protein_id=WP_001830890.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	97436	97849	.	+	.	ID=gene-RM680_RS04255;Name=RM680_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04255;old_locus_tag=RM680_04260
NZ_JAVRJI010000004.1	Protein Homology	CDS	97436	97849	.	+	0	ID=cds-WP_001830808.1;Parent=gene-RM680_RS04255;Dbxref=GenBank:WP_001830808.1;Name=WP_001830808.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500319.1;locus_tag=RM680_RS04255;product=universal stress protein;protein_id=WP_001830808.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	98150	98839	.	-	.	ID=gene-RM680_RS04260;Name=RM680_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04260;old_locus_tag=RM680_04265
NZ_JAVRJI010000004.1	Protein Homology	CDS	98150	98839	.	-	0	ID=cds-WP_001830786.1;Parent=gene-RM680_RS04260;Dbxref=GenBank:WP_001830786.1;Name=WP_001830786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500320.1;locus_tag=RM680_RS04260;product=metal-dependent hydrolase;protein_id=WP_001830786.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	99011	100066	.	+	.	ID=gene-RM680_RS04265;Name=RM680_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04265;old_locus_tag=RM680_04270
NZ_JAVRJI010000004.1	Protein Homology	CDS	99011	100066	.	+	0	ID=cds-WP_001830888.1;Parent=gene-RM680_RS04265;Dbxref=GenBank:WP_001830888.1;Name=WP_001830888.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500321.1;locus_tag=RM680_RS04265;product=M24 family metallopeptidase;protein_id=WP_001830888.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	100130	101245	.	-	.	ID=gene-RM680_RS04270;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=RM680_RS04270;old_locus_tag=RM680_04275
NZ_JAVRJI010000004.1	Protein Homology	CDS	100130	101245	.	-	0	ID=cds-WP_001830775.1;Parent=gene-RM680_RS04270;Dbxref=GenBank:WP_001830775.1;Name=WP_001830775.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830775.1;locus_tag=RM680_RS04270;product=alanine dehydrogenase;protein_id=WP_001830775.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	101393	101893	.	+	.	ID=gene-RM680_RS04275;Name=RM680_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04275;old_locus_tag=RM680_04280
NZ_JAVRJI010000004.1	Protein Homology	CDS	101393	101893	.	+	0	ID=cds-WP_002494483.1;Parent=gene-RM680_RS04275;Dbxref=GenBank:WP_002494483.1;Name=WP_002494483.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500324.1;locus_tag=RM680_RS04275;product=universal stress protein;protein_id=WP_002494483.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	102188	102334	.	+	.	ID=gene-RM680_RS04280;Name=RM680_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04280;old_locus_tag=RM680_04285
NZ_JAVRJI010000004.1	GeneMarkS-2+	CDS	102188	102334	.	+	0	ID=cds-WP_001830851.1;Parent=gene-RM680_RS04280;Dbxref=GenBank:WP_001830851.1;Name=WP_001830851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS04280;product=hypothetical protein;protein_id=WP_001830851.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	102530	103783	.	-	.	ID=gene-RM680_RS04285;Name=RM680_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04285;old_locus_tag=RM680_04290
NZ_JAVRJI010000004.1	Protein Homology	CDS	102530	103783	.	-	0	ID=cds-WP_001830869.1;Parent=gene-RM680_RS04285;Dbxref=GenBank:WP_001830869.1;Name=WP_001830869.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834572.1;locus_tag=RM680_RS04285;product=acetate kinase;protein_id=WP_001830869.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	103872	104819	.	-	.	ID=gene-RM680_RS04290;Name=RM680_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04290;old_locus_tag=RM680_04295
NZ_JAVRJI010000004.1	Protein Homology	CDS	103872	104819	.	-	0	ID=cds-WP_001832682.1;Parent=gene-RM680_RS04290;Dbxref=GenBank:WP_001832682.1;Name=WP_001832682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500326.1;locus_tag=RM680_RS04290;product=class I SAM-dependent methyltransferase;protein_id=WP_001832682.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	104948	105442	.	-	.	ID=gene-RM680_RS04295;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=RM680_RS04295;old_locus_tag=RM680_04300
NZ_JAVRJI010000004.1	Protein Homology	CDS	104948	105442	.	-	0	ID=cds-WP_001832701.1;Parent=gene-RM680_RS04295;Dbxref=GenBank:WP_001832701.1;Name=WP_001832701.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500327.1;locus_tag=RM680_RS04295;product=thiol peroxidase;protein_id=WP_001832701.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	105684	106448	.	-	.	ID=gene-RM680_RS04300;Name=RM680_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04300;old_locus_tag=RM680_04305
NZ_JAVRJI010000004.1	Protein Homology	CDS	105684	106448	.	-	0	ID=cds-WP_001830743.1;Parent=gene-RM680_RS04300;Dbxref=GenBank:WP_001830743.1;Name=WP_001830743.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465278.1;locus_tag=RM680_RS04300;product=sulfite exporter TauE/SafE family protein;protein_id=WP_001830743.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	106488	107711	.	-	.	ID=gene-RM680_RS04305;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=RM680_RS04305;old_locus_tag=RM680_04310
NZ_JAVRJI010000004.1	Protein Homology	CDS	106488	107711	.	-	0	ID=cds-WP_001830758.1;Parent=gene-RM680_RS04305;Dbxref=GenBank:WP_001830758.1;Name=WP_001830758.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474712.1;locus_tag=RM680_RS04305;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_001830758.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	107711	108850	.	-	.	ID=gene-RM680_RS04310;Name=RM680_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04310;old_locus_tag=RM680_04315
NZ_JAVRJI010000004.1	Protein Homology	CDS	107711	108850	.	-	0	ID=cds-WP_001830860.1;Parent=gene-RM680_RS04310;Dbxref=GenBank:WP_001830860.1;Name=WP_001830860.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830860.1;locus_tag=RM680_RS04310;product=cysteine desulfurase family protein;protein_id=WP_001830860.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	109180	110874	.	-	.	ID=gene-RM680_RS04315;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=RM680_RS04315;old_locus_tag=RM680_04320
NZ_JAVRJI010000004.1	Protein Homology	CDS	109180	110874	.	-	0	ID=cds-WP_001830796.1;Parent=gene-RM680_RS04315;Dbxref=GenBank:WP_001830796.1;Name=WP_001830796.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500332.1;locus_tag=RM680_RS04315;product=septation ring formation regulator EzrA;protein_id=WP_001830796.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	111009	111479	.	+	.	ID=gene-RM680_RS04320;Name=RM680_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04320;old_locus_tag=RM680_04325
NZ_JAVRJI010000004.1	Protein Homology	CDS	111009	111479	.	+	0	ID=cds-WP_001830812.1;Parent=gene-RM680_RS04320;Dbxref=GenBank:WP_001830812.1;Name=WP_001830812.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830812.1;locus_tag=RM680_RS04320;product=GAF domain-containing protein;protein_id=WP_001830812.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	111700	112302	.	+	.	ID=gene-RM680_RS04325;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=RM680_RS04325;old_locus_tag=RM680_04330
NZ_JAVRJI010000004.1	Protein Homology	CDS	111700	112302	.	+	0	ID=cds-WP_001830798.1;Parent=gene-RM680_RS04325;Dbxref=GenBank:WP_001830798.1;Name=WP_001830798.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1;locus_tag=RM680_RS04325;product=30S ribosomal protein S4;protein_id=WP_001830798.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	112572	113318	.	-	.	ID=gene-RM680_RS04330;Name=RM680_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04330;old_locus_tag=RM680_04335
NZ_JAVRJI010000004.1	Protein Homology	CDS	112572	113318	.	-	0	ID=cds-WP_001832720.1;Parent=gene-RM680_RS04330;Dbxref=GenBank:WP_001832720.1;Name=WP_001832720.1;Ontology_term=GO:0006629,GO:0008081,GO:0046872;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832720.1;locus_tag=RM680_RS04330;product=glycerophosphodiester phosphodiesterase;protein_id=WP_001832720.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	113396	113836	.	+	.	ID=gene-RM680_RS04335;Name=RM680_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04335;old_locus_tag=RM680_04340
NZ_JAVRJI010000004.1	Protein Homology	CDS	113396	113836	.	+	0	ID=cds-WP_001830816.1;Parent=gene-RM680_RS04335;Dbxref=GenBank:WP_001830816.1;Name=WP_001830816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484453.1;locus_tag=RM680_RS04335;product=SACOL1771 family peroxiredoxin;protein_id=WP_001830816.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	113963	115126	.	+	.	ID=gene-RM680_RS04340;Name=RM680_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04340;old_locus_tag=RM680_04345
NZ_JAVRJI010000004.1	Protein Homology	CDS	113963	115126	.	+	0	ID=cds-WP_001830752.1;Parent=gene-RM680_RS04340;Dbxref=GenBank:WP_001830752.1;Name=WP_001830752.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502331.1;locus_tag=RM680_RS04340;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_001830752.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	115116	116711	.	+	.	ID=gene-RM680_RS04345;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=RM680_RS04345;old_locus_tag=RM680_04350
NZ_JAVRJI010000004.1	Protein Homology	CDS	115116	116711	.	+	0	ID=cds-WP_001830903.1;Parent=gene-RM680_RS04345;Dbxref=GenBank:WP_001830903.1;Name=WP_001830903.1;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505776.1;locus_tag=RM680_RS04345;product=phosphoglycerate dehydrogenase;protein_id=WP_001830903.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	116791	117915	.	-	.	ID=gene-RM680_RS04350;Name=RM680_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04350;old_locus_tag=RM680_04355
NZ_JAVRJI010000004.1	Protein Homology	CDS	116791	117915	.	-	0	ID=cds-WP_001830750.1;Parent=gene-RM680_RS04350;Dbxref=GenBank:WP_001830750.1;Name=WP_001830750.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360833.1;locus_tag=RM680_RS04350;product=HAD family hydrolase;protein_id=WP_001830750.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	118011	119483	.	-	.	ID=gene-RM680_RS04355;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=RM680_RS04355;old_locus_tag=RM680_04360
NZ_JAVRJI010000004.1	Protein Homology	CDS	118011	119483	.	-	0	ID=cds-WP_002456458.1;Parent=gene-RM680_RS04355;Dbxref=GenBank:WP_002456458.1;Name=WP_002456458.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489789.1;locus_tag=RM680_RS04355;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_002456458.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	119693	120316	.	-	.	ID=gene-RM680_RS04360;Name=RM680_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04360;old_locus_tag=RM680_04365
NZ_JAVRJI010000004.1	Protein Homology	CDS	119693	120316	.	-	0	ID=cds-WP_001830872.1;Parent=gene-RM680_RS04360;Dbxref=GenBank:WP_001830872.1;Name=WP_001830872.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474689.1;locus_tag=RM680_RS04360;product=lysophospholipid acyltransferase family protein;protein_id=WP_001830872.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	120596	121834	.	+	.	ID=gene-RM680_RS04365;Name=RM680_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04365;old_locus_tag=RM680_04370
NZ_JAVRJI010000004.1	Protein Homology	CDS	120596	121834	.	+	0	ID=cds-WP_001830793.1;Parent=gene-RM680_RS04365;Dbxref=GenBank:WP_001830793.1;Name=WP_001830793.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464558.1;locus_tag=RM680_RS04365;product=S1C family serine protease;protein_id=WP_001830793.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	122025	123290	.	-	.	ID=gene-RM680_RS04370;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=RM680_RS04370;old_locus_tag=RM680_04375
NZ_JAVRJI010000004.1	Protein Homology	CDS	122025	123290	.	-	0	ID=cds-WP_001830858.1;Parent=gene-RM680_RS04370;Dbxref=GenBank:WP_001830858.1;Name=WP_001830858.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464559.1;locus_tag=RM680_RS04370;product=tyrosine--tRNA ligase;protein_id=WP_001830858.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	123694	124599	.	+	.	ID=gene-RM680_RS04375;Name=RM680_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04375;old_locus_tag=RM680_04380
NZ_JAVRJI010000004.1	Protein Homology	CDS	123694	124599	.	+	0	ID=cds-WP_001830902.1;Parent=gene-RM680_RS04375;Dbxref=GenBank:WP_001830902.1;Name=WP_001830902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464560.1;locus_tag=RM680_RS04375;product=transglycosylase domain-containing protein;protein_id=WP_001830902.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	124689	126356	.	-	.	ID=gene-RM680_RS04380;Name=RM680_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04380;old_locus_tag=RM680_04385
NZ_JAVRJI010000004.1	Protein Homology	CDS	124689	126356	.	-	0	ID=cds-WP_002440219.1;Parent=gene-RM680_RS04380;Dbxref=GenBank:WP_002440219.1;Name=WP_002440219.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=RM680_RS04380;product=formate--tetrahydrofolate ligase;protein_id=WP_002440219.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	126776	127765	.	-	.	ID=gene-RM680_RS04385;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=RM680_RS04385;old_locus_tag=RM680_04390
NZ_JAVRJI010000004.1	Protein Homology	CDS	126776	127765	.	-	0	ID=cds-WP_001830844.1;Parent=gene-RM680_RS04385;Dbxref=GenBank:WP_001830844.1;Name=WP_001830844.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500354.1;locus_tag=RM680_RS04385;product=catabolite control protein A;protein_id=WP_001830844.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	128021	129112	.	-	.	ID=gene-RM680_RS04390;Name=RM680_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04390;old_locus_tag=RM680_04395
NZ_JAVRJI010000004.1	Protein Homology	CDS	128021	129112	.	-	0	ID=cds-WP_001830908.1;Parent=gene-RM680_RS04390;Dbxref=GenBank:WP_001830908.1;Name=WP_001830908.1;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500356.1;locus_tag=RM680_RS04390;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;protein_id=WP_001830908.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	129547	130770	.	-	.	ID=gene-RM680_RS04395;Name=RM680_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04395;old_locus_tag=RM680_04400
NZ_JAVRJI010000004.1	Protein Homology	CDS	129547	130770	.	-	0	ID=cds-WP_311563512.1;Parent=gene-RM680_RS04395;Dbxref=GenBank:WP_311563512.1;Name=WP_311563512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493170.1;locus_tag=RM680_RS04395;product=YtxH domain-containing protein;protein_id=WP_311563512.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	130848	131339	.	-	.	ID=gene-RM680_RS04400;Name=RM680_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04400;old_locus_tag=RM680_04405
NZ_JAVRJI010000004.1	Protein Homology	CDS	130848	131339	.	-	0	ID=cds-WP_001830868.1;Parent=gene-RM680_RS04400;Dbxref=GenBank:WP_001830868.1;Name=WP_001830868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500359.1;locus_tag=RM680_RS04400;product=DUF948 domain-containing protein;protein_id=WP_001830868.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	131414	132727	.	-	.	ID=gene-RM680_RS04405;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=RM680_RS04405;old_locus_tag=RM680_04410
NZ_JAVRJI010000004.1	Protein Homology	CDS	131414	132727	.	-	0	ID=cds-WP_001830747.1;Parent=gene-RM680_RS04405;Dbxref=GenBank:WP_001830747.1;Name=WP_001830747.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500360.1;locus_tag=RM680_RS04405;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_001830747.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	132748	136257	.	-	.	ID=gene-RM680_RS04410;Name=RM680_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04410;old_locus_tag=RM680_04415
NZ_JAVRJI010000004.1	Protein Homology	CDS	132748	136257	.	-	0	ID=cds-WP_001830880.1;Parent=gene-RM680_RS04410;Dbxref=GenBank:WP_001830880.1;Name=WP_001830880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470393.1;locus_tag=RM680_RS04410;product=DNA translocase FtsK;protein_id=WP_001830880.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	136278	136874	.	-	.	ID=gene-RM680_RS04415;Name=ytpR;gbkey=Gene;gene=ytpR;gene_biotype=protein_coding;locus_tag=RM680_RS04415;old_locus_tag=RM680_04420
NZ_JAVRJI010000004.1	Protein Homology	CDS	136278	136874	.	-	0	ID=cds-WP_001830779.1;Parent=gene-RM680_RS04415;Dbxref=GenBank:WP_001830779.1;Name=WP_001830779.1;gbkey=CDS;gene=ytpR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500362.1;locus_tag=RM680_RS04415;product=YtpR family tRNA-binding protein;protein_id=WP_001830779.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	136897	137751	.	-	.	ID=gene-RM680_RS04420;Name=RM680_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04420;old_locus_tag=RM680_04425
NZ_JAVRJI010000004.1	Protein Homology	CDS	136897	137751	.	-	0	ID=cds-WP_001832670.1;Parent=gene-RM680_RS04420;Dbxref=GenBank:WP_001832670.1;Name=WP_001832670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012101723.1;locus_tag=RM680_RS04420;product=DUF1444 domain-containing protein;protein_id=WP_001832670.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	137889	138200	.	-	.	ID=gene-RM680_RS04425;Name=RM680_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04425;old_locus_tag=RM680_04430
NZ_JAVRJI010000004.1	Protein Homology	CDS	137889	138200	.	-	0	ID=cds-WP_001830792.1;Parent=gene-RM680_RS04425;Dbxref=GenBank:WP_001830792.1;Name=WP_001830792.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446698.1;locus_tag=RM680_RS04425;product=thioredoxin family protein;protein_id=WP_001830792.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	138206	139291	.	-	.	ID=gene-RM680_RS04430;Name=RM680_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04430;old_locus_tag=RM680_04435
NZ_JAVRJI010000004.1	Protein Homology	CDS	138206	139291	.	-	0	ID=cds-WP_001830905.1;Parent=gene-RM680_RS04430;Dbxref=GenBank:WP_001830905.1;Name=WP_001830905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830905.1;locus_tag=RM680_RS04430;product=M42 family metallopeptidase;protein_id=WP_001830905.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	139376	139690	.	+	.	ID=gene-RM680_RS04435;Name=RM680_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04435;old_locus_tag=RM680_04440
NZ_JAVRJI010000004.1	Protein Homology	CDS	139376	139690	.	+	0	ID=cds-WP_001830778.1;Parent=gene-RM680_RS04435;Dbxref=GenBank:WP_001830778.1;Name=WP_001830778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457842.1;locus_tag=RM680_RS04435;product=PepSY domain-containing protein;protein_id=WP_001830778.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	139853	140500	.	-	.	ID=gene-RM680_RS04440;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=RM680_RS04440;old_locus_tag=RM680_04445
NZ_JAVRJI010000004.1	Protein Homology	CDS	139853	140500	.	-	0	ID=cds-WP_002493957.1;Parent=gene-RM680_RS04440;Dbxref=GenBank:WP_002493957.1;Name=WP_002493957.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457843.1;locus_tag=RM680_RS04440;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_002493957.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	140514	141305	.	-	.	ID=gene-RM680_RS04445;Name=RM680_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04445;old_locus_tag=RM680_04450
NZ_JAVRJI010000004.1	Protein Homology	CDS	140514	141305	.	-	0	ID=cds-WP_001830846.1;Parent=gene-RM680_RS04445;Dbxref=GenBank:WP_001830846.1;Name=WP_001830846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602611.1;locus_tag=RM680_RS04445;product=phosphotransferase family protein;protein_id=WP_001830846.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	141692	142540	.	-	.	ID=gene-RM680_RS04450;Name=dat;gbkey=Gene;gene=dat;gene_biotype=protein_coding;locus_tag=RM680_RS04450;old_locus_tag=RM680_04455
NZ_JAVRJI010000004.1	Protein Homology	CDS	141692	142540	.	-	0	ID=cds-WP_001830829.1;Parent=gene-RM680_RS04450;Dbxref=GenBank:WP_001830829.1;Name=WP_001830829.1;Ontology_term=GO:0019480,GO:0046416,GO:0030170,GO:0047810;gbkey=CDS;gene=dat;go_function=pyridoxal phosphate binding|0030170||IEA,D-alanine-2-oxoglutarate aminotransferase activity|0047810||IEA;go_process=L-alanine oxidation to pyruvate via D-alanine|0019480||IEA,D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500370.1;locus_tag=RM680_RS04450;product=D-amino-acid transaminase;protein_id=WP_001830829.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	142544	143953	.	-	.	ID=gene-RM680_RS04455;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=RM680_RS04455;old_locus_tag=RM680_04460
NZ_JAVRJI010000004.1	Protein Homology	CDS	142544	143953	.	-	0	ID=cds-WP_311563513.1;Parent=gene-RM680_RS04455;Dbxref=GenBank:WP_311563513.1;Name=WP_311563513.1;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;gene=pepV;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500371.1;locus_tag=RM680_RS04455;product=dipeptidase PepV;protein_id=WP_311563513.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	144261	144689	.	-	.	ID=gene-RM680_RS04460;Name=RM680_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04460;old_locus_tag=RM680_04465
NZ_JAVRJI010000004.1	Protein Homology	CDS	144261	144689	.	-	0	ID=cds-WP_002484460.1;Parent=gene-RM680_RS04460;Dbxref=GenBank:WP_002484460.1;Name=WP_002484460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830757.1;locus_tag=RM680_RS04460;product=YtxH domain-containing protein;protein_id=WP_002484460.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	144707	145399	.	-	.	ID=gene-RM680_RS04465;Name=RM680_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04465;old_locus_tag=RM680_04470
NZ_JAVRJI010000004.1	Protein Homology	CDS	144707	145399	.	-	0	ID=cds-WP_001830817.1;Parent=gene-RM680_RS04465;Dbxref=GenBank:WP_001830817.1;Name=WP_001830817.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830817.1;locus_tag=RM680_RS04465;product=pseudouridine synthase;protein_id=WP_001830817.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	145396	147057	.	-	.	ID=gene-RM680_RS04470;Name=RM680_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04470;old_locus_tag=RM680_04475
NZ_JAVRJI010000004.1	Protein Homology	CDS	145396	147057	.	-	0	ID=cds-WP_001830740.1;Parent=gene-RM680_RS04470;Dbxref=GenBank:WP_001830740.1;Name=WP_001830740.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500374.1;locus_tag=RM680_RS04470;product=putative polysaccharide biosynthesis protein;protein_id=WP_001830740.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	147330	148592	.	+	.	ID=gene-RM680_RS04475;Name=RM680_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04475;old_locus_tag=RM680_04480
NZ_JAVRJI010000004.1	Protein Homology	CDS	147330	148592	.	+	0	ID=cds-WP_001830813.1;Parent=gene-RM680_RS04475;Dbxref=GenBank:WP_001830813.1;Name=WP_001830813.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830813.1;locus_tag=RM680_RS04475;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_001830813.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	pseudogene	148964	160041	.	-	.	ID=gene-RM680_RS04480;Name=RM680_RS04480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS04480;old_locus_tag=RM680_04485;pseudo=true
NZ_JAVRJI010000004.1	Protein Homology	CDS	148964	160041	.	-	0	ID=cds-RM680_RS04480;Parent=gene-RM680_RS04480;Note=frameshifted;Ontology_term=GO:0098609;gbkey=CDS;go_process=cell-cell adhesion|0098609||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504033.1;locus_tag=RM680_RS04480;product=SasC/FmtB family protein;pseudo=true;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	160446	160757	.	-	.	ID=gene-RM680_RS04485;Name=RM680_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04485;old_locus_tag=RM680_04490
NZ_JAVRJI010000004.1	Protein Homology	CDS	160446	160757	.	-	0	ID=cds-WP_001830891.1;Parent=gene-RM680_RS04485;Dbxref=GenBank:WP_001830891.1;Name=WP_001830891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464567.1;locus_tag=RM680_RS04485;product=rhodanese-like domain-containing protein;protein_id=WP_001830891.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	160783	163200	.	-	.	ID=gene-RM680_RS04490;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=RM680_RS04490;old_locus_tag=RM680_04495
NZ_JAVRJI010000004.1	Protein Homology	CDS	160783	163200	.	-	0	ID=cds-WP_002484468.1;Parent=gene-RM680_RS04490;Dbxref=GenBank:WP_002484468.1;Name=WP_002484468.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500378.1;locus_tag=RM680_RS04490;product=leucine--tRNA ligase;protein_id=WP_002484468.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	163489	164703	.	-	.	ID=gene-RM680_RS04495;Name=RM680_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04495;old_locus_tag=RM680_04500
NZ_JAVRJI010000004.1	Protein Homology	CDS	163489	164703	.	-	0	ID=cds-WP_001830884.1;Parent=gene-RM680_RS04495;Dbxref=GenBank:WP_001830884.1;Name=WP_001830884.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830884.1;locus_tag=RM680_RS04495;product=MDR family MFS transporter;protein_id=WP_001830884.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	164810	165763	.	+	.	ID=gene-RM680_RS04500;Name=RM680_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04500;old_locus_tag=RM680_04505
NZ_JAVRJI010000004.1	Protein Homology	CDS	164810	165763	.	+	0	ID=cds-WP_001830802.1;Parent=gene-RM680_RS04500;Dbxref=GenBank:WP_001830802.1;Name=WP_001830802.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0051536,GO:1904047;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474958.1;locus_tag=RM680_RS04500;product=TIGR01212 family radical SAM protein;protein_id=WP_001830802.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	165760	166323	.	+	.	ID=gene-RM680_RS04505;Name=RM680_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04505;old_locus_tag=RM680_04510
NZ_JAVRJI010000004.1	Protein Homology	CDS	165760	166323	.	+	0	ID=cds-WP_001830894.1;Parent=gene-RM680_RS04505;Dbxref=GenBank:WP_001830894.1;Name=WP_001830894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456448.1;locus_tag=RM680_RS04505;product=class I SAM-dependent methyltransferase;protein_id=WP_001830894.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	166545	166961	.	-	.	ID=gene-RM680_RS04510;Name=RM680_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04510;old_locus_tag=RM680_04515
NZ_JAVRJI010000004.1	Protein Homology	CDS	166545	166961	.	-	0	ID=cds-WP_002484465.1;Parent=gene-RM680_RS04510;Dbxref=GenBank:WP_002484465.1;Name=WP_002484465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504856.1;locus_tag=RM680_RS04510;product=SarA family transcriptional regulator;protein_id=WP_002484465.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	167451	168278	.	-	.	ID=gene-RM680_RS04515;Name=RM680_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04515;old_locus_tag=RM680_04520
NZ_JAVRJI010000004.1	Protein Homology	CDS	167451	168278	.	-	0	ID=cds-WP_002484455.1;Parent=gene-RM680_RS04515;Dbxref=GenBank:WP_002484455.1;Name=WP_002484455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361899.1;locus_tag=RM680_RS04515;product=alpha/beta fold hydrolase;protein_id=WP_002484455.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	168521	169522	.	+	.	ID=gene-RM680_RS04520;Name=RM680_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04520;old_locus_tag=RM680_04525
NZ_JAVRJI010000004.1	Protein Homology	CDS	168521	169522	.	+	0	ID=cds-WP_002484452.1;Parent=gene-RM680_RS04520;Dbxref=GenBank:WP_002484452.1;Name=WP_002484452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499462.1;locus_tag=RM680_RS04520;product=proline dehydrogenase family protein;protein_id=WP_002484452.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	169780	170241	.	-	.	ID=gene-RM680_RS04525;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=RM680_RS04525;old_locus_tag=RM680_04530
NZ_JAVRJI010000004.1	Protein Homology	CDS	169780	170241	.	-	0	ID=cds-WP_002456446.1;Parent=gene-RM680_RS04525;Dbxref=GenBank:WP_002456446.1;Name=WP_002456446.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474997.1;locus_tag=RM680_RS04525;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_002456446.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	170254	171435	.	-	.	ID=gene-RM680_RS04530;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=RM680_RS04530;old_locus_tag=RM680_04535
NZ_JAVRJI010000004.1	Protein Homology	CDS	170254	171435	.	-	0	ID=cds-WP_002485748.1;Parent=gene-RM680_RS04530;Dbxref=GenBank:WP_002485748.1;Name=WP_002485748.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500389.1;locus_tag=RM680_RS04530;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_002485748.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	171448	172080	.	-	.	ID=gene-RM680_RS04535;Name=RM680_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04535;old_locus_tag=RM680_04540
NZ_JAVRJI010000004.1	Protein Homology	CDS	171448	172080	.	-	0	ID=cds-WP_002467848.1;Parent=gene-RM680_RS04535;Dbxref=GenBank:WP_002467848.1;Name=WP_002467848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500390.1;locus_tag=RM680_RS04535;product=riboflavin synthase;protein_id=WP_002467848.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	172087	173130	.	-	.	ID=gene-RM680_RS04540;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=RM680_RS04540;old_locus_tag=RM680_04545
NZ_JAVRJI010000004.1	Protein Homology	CDS	172087	173130	.	-	0	ID=cds-WP_002494782.1;Parent=gene-RM680_RS04540;Dbxref=GenBank:WP_002494782.1;Name=WP_002494782.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474980.1;locus_tag=RM680_RS04540;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_002494782.1;transl_table=11
NZ_JAVRJI010000004.1	cmsearch	riboswitch	173279	173417	.	-	.	ID=id-NZ_JAVRJI010000004.1:173279..173417;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000004.1	RefSeq	gene	173566	175050	.	-	.	ID=gene-RM680_RS04545;Name=RM680_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04545;old_locus_tag=RM680_04550
NZ_JAVRJI010000004.1	Protein Homology	CDS	173566	175050	.	-	0	ID=cds-WP_002484471.1;Parent=gene-RM680_RS04545;Dbxref=GenBank:WP_002484471.1;Name=WP_002484471.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467850.1;locus_tag=RM680_RS04545;product=FAD/NAD(P)-binding protein;protein_id=WP_002484471.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	175398	176249	.	-	.	ID=gene-RM680_RS04550;Name=RM680_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04550;old_locus_tag=RM680_04555
NZ_JAVRJI010000004.1	Protein Homology	CDS	175398	176249	.	-	0	ID=cds-WP_001830727.1;Parent=gene-RM680_RS04550;Dbxref=GenBank:WP_001830727.1;Name=WP_001830727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496801.1;locus_tag=RM680_RS04550;product=N-acetylglucosaminidase;protein_id=WP_001830727.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	176627	176842	.	-	.	ID=gene-RM680_RS04555;Name=RM680_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04555;old_locus_tag=RM680_04560
NZ_JAVRJI010000004.1	Protein Homology	CDS	176627	176842	.	-	0	ID=cds-WP_002456441.1;Parent=gene-RM680_RS04555;Dbxref=GenBank:WP_002456441.1;Name=WP_002456441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456441.1;locus_tag=RM680_RS04555;product=hypothetical protein;protein_id=WP_002456441.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	177050	177529	.	+	.	ID=gene-RM680_RS04560;Name=RM680_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04560;old_locus_tag=RM680_04565
NZ_JAVRJI010000004.1	Protein Homology	CDS	177050	177529	.	+	0	ID=cds-WP_311563514.1;Parent=gene-RM680_RS04560;Dbxref=GenBank:WP_311563514.1;Name=WP_311563514.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830724.1;locus_tag=RM680_RS04560;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_311563514.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	177535	177978	.	+	.	ID=gene-RM680_RS04565;Name=RM680_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04565;old_locus_tag=RM680_04570
NZ_JAVRJI010000004.1	Protein Homology	CDS	177535	177978	.	+	0	ID=cds-WP_001830734.1;Parent=gene-RM680_RS04565;Dbxref=GenBank:WP_001830734.1;Name=WP_001830734.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830734.1;locus_tag=RM680_RS04565;product=competence protein ComK;protein_id=WP_001830734.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	177965	178408	.	-	.	ID=gene-RM680_RS04570;Name=RM680_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04570;old_locus_tag=RM680_04575
NZ_JAVRJI010000004.1	Protein Homology	CDS	177965	178408	.	-	0	ID=cds-WP_002467846.1;Parent=gene-RM680_RS04570;Dbxref=GenBank:WP_002467846.1;Name=WP_002467846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830728.1;locus_tag=RM680_RS04570;product=hypothetical protein;protein_id=WP_002467846.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	178548	179261	.	-	.	ID=gene-RM680_RS04575;Name=RM680_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04575;old_locus_tag=RM680_04580
NZ_JAVRJI010000004.1	Protein Homology	CDS	178548	179261	.	-	0	ID=cds-WP_002484454.1;Parent=gene-RM680_RS04575;Dbxref=GenBank:WP_002484454.1;Name=WP_002484454.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500402.1;locus_tag=RM680_RS04575;product=transaldolase;protein_id=WP_002484454.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	179538	179846	.	+	.	ID=gene-RM680_RS04580;Name=RM680_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04580;old_locus_tag=RM680_04585
NZ_JAVRJI010000004.1	Protein Homology	CDS	179538	179846	.	+	0	ID=cds-WP_002446728.1;Parent=gene-RM680_RS04580;Dbxref=GenBank:WP_002446728.1;Name=WP_002446728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497385.1;locus_tag=RM680_RS04580;product=hypothetical protein;protein_id=WP_002446728.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	179885	180250	.	+	.	ID=gene-RM680_RS04585;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=RM680_RS04585;old_locus_tag=RM680_04590
NZ_JAVRJI010000004.1	Protein Homology	CDS	179885	180250	.	+	0	ID=cds-WP_001830726.1;Parent=gene-RM680_RS04585;Dbxref=GenBank:WP_001830726.1;Name=WP_001830726.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500680.1;locus_tag=RM680_RS04585;product=fluoride efflux transporter CrcB;protein_id=WP_001830726.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	180247	180600	.	+	.	ID=gene-RM680_RS04590;Name=RM680_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04590;old_locus_tag=RM680_04595
NZ_JAVRJI010000004.1	Protein Homology	CDS	180247	180600	.	+	0	ID=cds-WP_001830729.1;Parent=gene-RM680_RS04590;Dbxref=GenBank:WP_001830729.1;Name=WP_001830729.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498017.1;locus_tag=RM680_RS04590;product=fluoride efflux transporter FluC;protein_id=WP_001830729.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	180927	181082	.	-	.	ID=gene-RM680_RS04595;Name=RM680_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04595;old_locus_tag=RM680_04600
NZ_JAVRJI010000004.1	GeneMarkS-2+	CDS	180927	181082	.	-	0	ID=cds-WP_002469577.1;Parent=gene-RM680_RS04595;Dbxref=GenBank:WP_002469577.1;Name=WP_002469577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS04595;product=hypothetical protein;protein_id=WP_002469577.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	181367	182203	.	-	.	ID=gene-RM680_RS04600;Name=RM680_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04600;old_locus_tag=RM680_04605
NZ_JAVRJI010000004.1	Protein Homology	CDS	181367	182203	.	-	0	ID=cds-WP_001829832.1;Parent=gene-RM680_RS04600;Dbxref=GenBank:WP_001829832.1;Name=WP_001829832.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464578.1;locus_tag=RM680_RS04600;product=aldo/keto reductase;protein_id=WP_001829832.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	182383	183291	.	-	.	ID=gene-RM680_RS04605;Name=RM680_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04605;old_locus_tag=RM680_04610
NZ_JAVRJI010000004.1	Protein Homology	CDS	182383	183291	.	-	0	ID=cds-WP_001829840.1;Parent=gene-RM680_RS04605;Dbxref=GenBank:WP_001829840.1;Name=WP_001829840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500409.1;locus_tag=RM680_RS04605;product=hypothetical protein;protein_id=WP_001829840.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	183394	184593	.	-	.	ID=gene-RM680_RS04610;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=RM680_RS04610;old_locus_tag=RM680_04615
NZ_JAVRJI010000004.1	Protein Homology	CDS	183394	184593	.	-	0	ID=cds-WP_001829830.1;Parent=gene-RM680_RS04610;Dbxref=GenBank:WP_001829830.1;Name=WP_001829830.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829830.1;locus_tag=RM680_RS04610;product=methionine adenosyltransferase;protein_id=WP_001829830.1;transl_table=11
NZ_JAVRJI010000004.1	cmsearch	riboswitch	184702	184811	.	-	.	ID=id-NZ_JAVRJI010000004.1:184702..184811;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000004.1	RefSeq	gene	184963	186555	.	+	.	ID=gene-RM680_RS04615;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=RM680_RS04615;old_locus_tag=RM680_04620
NZ_JAVRJI010000004.1	Protein Homology	CDS	184963	186555	.	+	0	ID=cds-WP_311563515.1;Parent=gene-RM680_RS04615;Dbxref=GenBank:WP_311563515.1;Name=WP_311563515.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500411.1;locus_tag=RM680_RS04615;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_311563515.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	186786	187571	.	-	.	ID=gene-RM680_RS04620;Name=RM680_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04620;old_locus_tag=RM680_04625
NZ_JAVRJI010000004.1	Protein Homology	CDS	186786	187571	.	-	0	ID=cds-WP_002456431.1;Parent=gene-RM680_RS04620;Dbxref=GenBank:WP_002456431.1;Name=WP_002456431.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498019.1;locus_tag=RM680_RS04620;product=alpha/beta hydrolase family protein;protein_id=WP_002456431.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	187558	188025	.	-	.	ID=gene-RM680_RS04625;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=RM680_RS04625;old_locus_tag=RM680_04630
NZ_JAVRJI010000004.1	Protein Homology	CDS	187558	188025	.	-	0	ID=cds-WP_002468782.1;Parent=gene-RM680_RS04625;Dbxref=GenBank:WP_002468782.1;Name=WP_002468782.1;Ontology_term=GO:0006139,GO:0017111;gbkey=CDS;gene=ytkD;go_function=ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503765.1;locus_tag=RM680_RS04625;product=RNA deprotection pyrophosphohydrolase;protein_id=WP_002468782.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	188096	188344	.	+	.	ID=gene-RM680_RS04630;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=RM680_RS04630;old_locus_tag=RM680_04635
NZ_JAVRJI010000004.1	Protein Homology	CDS	188096	188344	.	+	0	ID=cds-WP_002457867.1;Parent=gene-RM680_RS04630;Dbxref=GenBank:WP_002457867.1;Name=WP_002457867.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496811.1;locus_tag=RM680_RS04630;product=membrane protein insertion efficiency factor YidD;protein_id=WP_002457867.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	188341	189342	.	-	.	ID=gene-RM680_RS04635;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=RM680_RS04635;old_locus_tag=RM680_04640
NZ_JAVRJI010000004.1	Protein Homology	CDS	188341	189342	.	-	0	ID=cds-WP_002486229.1;Parent=gene-RM680_RS04635;Dbxref=GenBank:WP_002486229.1;Name=WP_002486229.1;Ontology_term=GO:0009234,GO:0016829;gbkey=CDS;gene=menC;go_function=lyase activity|0016829||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829851.1;locus_tag=RM680_RS04635;product=o-succinylbenzoate synthase;protein_id=WP_002486229.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	189332	190756	.	-	.	ID=gene-RM680_RS04640;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=RM680_RS04640;old_locus_tag=RM680_04645
NZ_JAVRJI010000004.1	Protein Homology	CDS	189332	190756	.	-	0	ID=cds-WP_002456429.1;Parent=gene-RM680_RS04640;Dbxref=GenBank:WP_002456429.1;Name=WP_002456429.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500620.1;locus_tag=RM680_RS04640;product=o-succinylbenzoate--CoA ligase;protein_id=WP_002456429.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	pseudogene	192007	192671	.	+	.	ID=gene-RM680_RS04645;Name=RM680_RS04645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS04645;old_locus_tag=RM680_04650;pseudo=true
NZ_JAVRJI010000004.1	Protein Homology	CDS	192007	192671	.	+	0	ID=cds-RM680_RS04645;Parent=gene-RM680_RS04645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474651.1;locus_tag=RM680_RS04645;product=Ltp family lipoprotein;pseudo=true;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	192833	193120	.	+	.	ID=gene-RM680_RS04650;Name=RM680_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04650;old_locus_tag=RM680_04655
NZ_JAVRJI010000004.1	Protein Homology	CDS	192833	193120	.	+	0	ID=cds-WP_002456426.1;Parent=gene-RM680_RS04650;Dbxref=GenBank:WP_002456426.1;Name=WP_002456426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487903.1;locus_tag=RM680_RS04650;product=hypothetical protein;protein_id=WP_002456426.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	193647	194381	.	+	.	ID=gene-RM680_RS04655;Name=RM680_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04655;old_locus_tag=RM680_04660
NZ_JAVRJI010000004.1	Protein Homology	CDS	193647	194381	.	+	0	ID=cds-WP_311563516.1;Parent=gene-RM680_RS04655;Dbxref=GenBank:WP_311563516.1;Name=WP_311563516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490110.1;locus_tag=RM680_RS04655;product=halocin C8 precursor-like protein;protein_id=WP_311563516.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	pseudogene	194647	194973	.	-	.	ID=gene-RM680_RS04660;Name=RM680_RS04660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS04660;old_locus_tag=RM680_04665;pseudo=true
NZ_JAVRJI010000004.1	Protein Homology	CDS	194647	194973	.	-	0	ID=cds-RM680_RS04660;Parent=gene-RM680_RS04660;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052205.1;locus_tag=RM680_RS04660;product=amidase;pseudo=true;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	195132	195626	.	+	.	ID=gene-RM680_RS04665;Name=RM680_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04665;old_locus_tag=RM680_04670
NZ_JAVRJI010000004.1	Protein Homology	CDS	195132	195626	.	+	0	ID=cds-WP_002456422.1;Parent=gene-RM680_RS04665;Dbxref=GenBank:WP_002456422.1;Name=WP_002456422.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456422.1;locus_tag=RM680_RS04665;product=site-specific integrase;protein_id=WP_002456422.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	195851	195939	.	-	.	ID=gene-RM680_RS04670;Name=RM680_RS04670;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04670;old_locus_tag=RM680_04675
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	195851	195939	.	-	.	ID=rna-RM680_RS04670;Parent=gene-RM680_RS04670;anticodon=(pos:complement(195902..195904));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04670;product=tRNA-Ser
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	195851	195939	.	-	.	ID=exon-RM680_RS04670-1;Parent=rna-RM680_RS04670;anticodon=(pos:complement(195902..195904));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04670;product=tRNA-Ser
NZ_JAVRJI010000004.1	RefSeq	gene	195993	196064	.	-	.	ID=gene-RM680_RS04675;Name=RM680_RS04675;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04675;old_locus_tag=RM680_04680
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	195993	196064	.	-	.	ID=rna-RM680_RS04675;Parent=gene-RM680_RS04675;anticodon=(pos:complement(196029..196031));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04675;product=tRNA-Glu
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	195993	196064	.	-	.	ID=exon-RM680_RS04675-1;Parent=rna-RM680_RS04675;anticodon=(pos:complement(196029..196031));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04675;product=tRNA-Glu
NZ_JAVRJI010000004.1	RefSeq	gene	196066	196140	.	-	.	ID=gene-RM680_RS04680;Name=RM680_RS04680;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04680;old_locus_tag=RM680_04685
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	196066	196140	.	-	.	ID=rna-RM680_RS04680;Parent=gene-RM680_RS04680;anticodon=(pos:complement(196106..196108));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04680;product=tRNA-Asn
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	196066	196140	.	-	.	ID=exon-RM680_RS04680-1;Parent=rna-RM680_RS04680;anticodon=(pos:complement(196106..196108));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04680;product=tRNA-Asn
NZ_JAVRJI010000004.1	RefSeq	gene	196150	196223	.	-	.	ID=gene-RM680_RS04685;Name=RM680_RS04685;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04685;old_locus_tag=RM680_04690
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	196150	196223	.	-	.	ID=rna-RM680_RS04685;Parent=gene-RM680_RS04685;anticodon=(pos:complement(196189..196191));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04685;product=tRNA-Gly
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	196150	196223	.	-	.	ID=exon-RM680_RS04685-1;Parent=rna-RM680_RS04685;anticodon=(pos:complement(196189..196191));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04685;product=tRNA-Gly
NZ_JAVRJI010000004.1	RefSeq	gene	196241	196316	.	-	.	ID=gene-RM680_RS04690;Name=RM680_RS04690;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04690;old_locus_tag=RM680_04695
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	196241	196316	.	-	.	ID=rna-RM680_RS04690;Parent=gene-RM680_RS04690;anticodon=(pos:complement(196281..196283));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04690;product=tRNA-His
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	196241	196316	.	-	.	ID=exon-RM680_RS04690-1;Parent=rna-RM680_RS04690;anticodon=(pos:complement(196281..196283));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04690;product=tRNA-His
NZ_JAVRJI010000004.1	RefSeq	gene	196330	196402	.	-	.	ID=gene-RM680_RS04695;Name=RM680_RS04695;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04695;old_locus_tag=RM680_04700
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	196330	196402	.	-	.	ID=rna-RM680_RS04695;Parent=gene-RM680_RS04695;anticodon=(pos:complement(196367..196369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04695;product=tRNA-Phe
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	196330	196402	.	-	.	ID=exon-RM680_RS04695-1;Parent=rna-RM680_RS04695;anticodon=(pos:complement(196367..196369));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04695;product=tRNA-Phe
NZ_JAVRJI010000004.1	RefSeq	gene	196413	196488	.	-	.	ID=gene-RM680_RS04700;Name=RM680_RS04700;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04700;old_locus_tag=RM680_04705
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	196413	196488	.	-	.	ID=rna-RM680_RS04700;Parent=gene-RM680_RS04700;anticodon=(pos:complement(196453..196455));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04700;product=tRNA-Asp
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	196413	196488	.	-	.	ID=exon-RM680_RS04700-1;Parent=rna-RM680_RS04700;anticodon=(pos:complement(196453..196455));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04700;product=tRNA-Asp
NZ_JAVRJI010000004.1	RefSeq	gene	196503	196576	.	-	.	ID=gene-RM680_RS04705;Name=RM680_RS04705;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04705;old_locus_tag=RM680_04710
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	196503	196576	.	-	.	ID=rna-RM680_RS04705;Parent=gene-RM680_RS04705;anticodon=(pos:complement(196540..196542));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04705;product=tRNA-Met
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	196503	196576	.	-	.	ID=exon-RM680_RS04705-1;Parent=rna-RM680_RS04705;anticodon=(pos:complement(196540..196542));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04705;product=tRNA-Met
NZ_JAVRJI010000004.1	RefSeq	gene	196891	197445	.	-	.	ID=gene-RM680_RS04710;Name=RM680_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04710;old_locus_tag=RM680_04715
NZ_JAVRJI010000004.1	Protein Homology	CDS	196891	197445	.	-	0	ID=cds-WP_001832974.1;Parent=gene-RM680_RS04710;Dbxref=GenBank:WP_001832974.1;Name=WP_001832974.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446743.1;locus_tag=RM680_RS04710;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_001832974.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	197581	198978	.	-	.	ID=gene-RM680_RS04715;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=RM680_RS04715;old_locus_tag=RM680_04720
NZ_JAVRJI010000004.1	Protein Homology	CDS	197581	198978	.	-	0	ID=cds-WP_002469574.1;Parent=gene-RM680_RS04715;Dbxref=GenBank:WP_002469574.1;Name=WP_002469574.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=oxygen-dependent protoporphyrinogen oxidase activity|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500459.1;locus_tag=RM680_RS04715;product=protoporphyrinogen oxidase;protein_id=WP_002469574.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	199122	200045	.	-	.	ID=gene-RM680_RS04720;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=RM680_RS04720;old_locus_tag=RM680_04725
NZ_JAVRJI010000004.1	Protein Homology	CDS	199122	200045	.	-	0	ID=cds-WP_001829846.1;Parent=gene-RM680_RS04720;Dbxref=GenBank:WP_001829846.1;Name=WP_001829846.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485187.1;locus_tag=RM680_RS04720;product=ferrochelatase;protein_id=WP_001829846.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	200122	201183	.	-	.	ID=gene-RM680_RS04725;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=RM680_RS04725;old_locus_tag=RM680_04730
NZ_JAVRJI010000004.1	Protein Homology	CDS	200122	201183	.	-	0	ID=cds-WP_002456355.1;Parent=gene-RM680_RS04725;Dbxref=GenBank:WP_002456355.1;Name=WP_002456355.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446746.1;locus_tag=RM680_RS04725;product=uroporphyrinogen decarboxylase;protein_id=WP_002456355.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	201476	201979	.	+	.	ID=gene-RM680_RS04730;Name=traP;gbkey=Gene;gene=traP;gene_biotype=protein_coding;locus_tag=RM680_RS04730;old_locus_tag=RM680_04735
NZ_JAVRJI010000004.1	Protein Homology	CDS	201476	201979	.	+	0	ID=cds-WP_002468814.1;Parent=gene-RM680_RS04730;Dbxref=GenBank:WP_002468814.1;Name=WP_002468814.1;gbkey=CDS;gene=traP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829811.1;locus_tag=RM680_RS04730;product=signal transduction protein TRAP;protein_id=WP_002468814.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	202536	203159	.	-	.	ID=gene-RM680_RS04735;Name=RM680_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04735;old_locus_tag=RM680_04740
NZ_JAVRJI010000004.1	Protein Homology	CDS	202536	203159	.	-	0	ID=cds-WP_002468833.1;Parent=gene-RM680_RS04735;Dbxref=GenBank:WP_002468833.1;Name=WP_002468833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476970.1;locus_tag=RM680_RS04735;product=CadD family cadmium resistance transporter;protein_id=WP_002468833.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	203218	204441	.	-	.	ID=gene-RM680_RS04740;Name=ecsB;gbkey=Gene;gene=ecsB;gene_biotype=protein_coding;locus_tag=RM680_RS04740;old_locus_tag=RM680_04745
NZ_JAVRJI010000004.1	Protein Homology	CDS	203218	204441	.	-	0	ID=cds-WP_002470395.1;Parent=gene-RM680_RS04740;Dbxref=GenBank:WP_002470395.1;Name=WP_002470395.1;gbkey=CDS;gene=ecsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363845.1;locus_tag=RM680_RS04740;product=ABC transporter permease EcsB;protein_id=WP_002470395.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	204434	205174	.	-	.	ID=gene-RM680_RS04745;Name=ecsA;gbkey=Gene;gene=ecsA;gene_biotype=protein_coding;locus_tag=RM680_RS04745;old_locus_tag=RM680_04750
NZ_JAVRJI010000004.1	Protein Homology	CDS	204434	205174	.	-	0	ID=cds-WP_001829855.1;Parent=gene-RM680_RS04745;Dbxref=GenBank:WP_001829855.1;Name=WP_001829855.1;gbkey=CDS;gene=ecsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457875.1;locus_tag=RM680_RS04745;product=ABC transporter ATP-binding protein EcsA;protein_id=WP_001829855.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	205304	205729	.	+	.	ID=gene-RM680_RS04750;Name=RM680_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04750;old_locus_tag=RM680_04755
NZ_JAVRJI010000004.1	Protein Homology	CDS	205304	205729	.	+	0	ID=cds-WP_001829828.1;Parent=gene-RM680_RS04750;Dbxref=GenBank:WP_001829828.1;Name=WP_001829828.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505405.1;locus_tag=RM680_RS04750;product=HIT family protein;protein_id=WP_001829828.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	205806	206177	.	+	.	ID=gene-RM680_RS04755;Name=RM680_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04755;old_locus_tag=RM680_04760
NZ_JAVRJI010000004.1	Protein Homology	CDS	205806	206177	.	+	0	ID=cds-WP_002456353.1;Parent=gene-RM680_RS04755;Dbxref=GenBank:WP_002456353.1;Name=WP_002456353.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456353.1;locus_tag=RM680_RS04755;product=YtxH domain-containing protein;protein_id=WP_002456353.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	206343	206903	.	+	.	ID=gene-RM680_RS04760;Name=RM680_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04760;old_locus_tag=RM680_04765
NZ_JAVRJI010000004.1	Protein Homology	CDS	206343	206903	.	+	0	ID=cds-WP_001829837.1;Parent=gene-RM680_RS04760;Dbxref=GenBank:WP_001829837.1;Name=WP_001829837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474659.1;locus_tag=RM680_RS04760;product=DUF3267 domain-containing protein;protein_id=WP_001829837.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	207106	208083	.	+	.	ID=gene-RM680_RS04765;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=RM680_RS04765;old_locus_tag=RM680_04770
NZ_JAVRJI010000004.1	Protein Homology	CDS	207106	208083	.	+	0	ID=cds-WP_002456352.1;Parent=gene-RM680_RS04765;Dbxref=GenBank:WP_002456352.1;Name=WP_002456352.1;gbkey=CDS;gene=prsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490116.1;locus_tag=RM680_RS04765;product=peptidylprolyl isomerase PrsA;protein_id=WP_002456352.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	208233	208337	.	-	.	ID=gene-RM680_RS04770;Name=RM680_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04770;old_locus_tag=RM680_04775
NZ_JAVRJI010000004.1	Protein Homology	CDS	208233	208337	.	-	0	ID=cds-WP_002440288.1;Parent=gene-RM680_RS04770;Dbxref=GenBank:WP_002440288.1;Name=WP_002440288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502120.1;locus_tag=RM680_RS04770;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_002440288.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	208509	209450	.	-	.	ID=gene-RM680_RS04775;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=protein_coding;locus_tag=RM680_RS04775;old_locus_tag=RM680_04780
NZ_JAVRJI010000004.1	Protein Homology	CDS	208509	209450	.	-	0	ID=cds-WP_002456351.1;Parent=gene-RM680_RS04775;Dbxref=GenBank:WP_002456351.1;Name=WP_002456351.1;gbkey=CDS;gene=yhaM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500470.1;locus_tag=RM680_RS04775;product=3'-5' exoribonuclease YhaM;protein_id=WP_002456351.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	209447	212386	.	-	.	ID=gene-RM680_RS04780;Name=RM680_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04780;old_locus_tag=RM680_04785
NZ_JAVRJI010000004.1	Protein Homology	CDS	209447	212386	.	-	0	ID=cds-WP_002486231.1;Parent=gene-RM680_RS04780;Dbxref=GenBank:WP_002486231.1;Name=WP_002486231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489111.1;locus_tag=RM680_RS04780;product=ATP-binding protein;protein_id=WP_002486231.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	212376	213572	.	-	.	ID=gene-RM680_RS04785;Name=RM680_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04785;old_locus_tag=RM680_04790
NZ_JAVRJI010000004.1	Protein Homology	CDS	212376	213572	.	-	0	ID=cds-WP_001829843.1;Parent=gene-RM680_RS04785;Dbxref=GenBank:WP_001829843.1;Name=WP_001829843.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500472.1;locus_tag=RM680_RS04785;product=metallophosphoesterase family protein;protein_id=WP_001829843.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	213843	214187	.	-	.	ID=gene-RM680_RS04790;Name=RM680_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04790;old_locus_tag=RM680_04795
NZ_JAVRJI010000004.1	Protein Homology	CDS	213843	214187	.	-	0	ID=cds-WP_001829805.1;Parent=gene-RM680_RS04790;Dbxref=GenBank:WP_001829805.1;Name=WP_001829805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498160.1;locus_tag=RM680_RS04790;product=YlbF/YmcA family competence regulator;protein_id=WP_001829805.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	214260	215390	.	-	.	ID=gene-RM680_RS04795;Name=RM680_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04795;old_locus_tag=RM680_04800
NZ_JAVRJI010000004.1	Protein Homology	CDS	214260	215390	.	-	0	ID=cds-WP_002485606.1;Parent=gene-RM680_RS04795;Dbxref=GenBank:WP_002485606.1;Name=WP_002485606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495600.1;locus_tag=RM680_RS04795;product=DUF445 domain-containing protein;protein_id=WP_002485606.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	215572	216036	.	-	.	ID=gene-RM680_RS04800;Name=xdrA;gbkey=Gene;gene=xdrA;gene_biotype=protein_coding;locus_tag=RM680_RS04800;old_locus_tag=RM680_04805
NZ_JAVRJI010000004.1	Protein Homology	CDS	215572	216036	.	-	0	ID=cds-WP_001829807.1;Parent=gene-RM680_RS04800;Dbxref=GenBank:WP_001829807.1;Name=WP_001829807.1;gbkey=CDS;gene=xdrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500476.1;locus_tag=RM680_RS04800;product=XRE family transcriptional regulator XdrA;protein_id=WP_001829807.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	216307	216930	.	-	.	ID=gene-RM680_RS04805;Name=RM680_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04805;old_locus_tag=RM680_04810
NZ_JAVRJI010000004.1	Protein Homology	CDS	216307	216930	.	-	0	ID=cds-WP_001829810.1;Parent=gene-RM680_RS04805;Dbxref=GenBank:WP_001829810.1;Name=WP_001829810.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500477.1;locus_tag=RM680_RS04805;product=response regulator;protein_id=WP_001829810.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	216923	218056	.	-	.	ID=gene-RM680_RS04810;Name=RM680_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04810;old_locus_tag=RM680_04815
NZ_JAVRJI010000004.1	Protein Homology	CDS	216923	218056	.	-	0	ID=cds-WP_001829819.1;Parent=gene-RM680_RS04810;Dbxref=GenBank:WP_001829819.1;Name=WP_001829819.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005515,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475949.1;locus_tag=RM680_RS04810;product=GAF domain-containing sensor histidine kinase;protein_id=WP_001829819.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	218215	219039	.	+	.	ID=gene-RM680_RS04815;Name=RM680_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04815;old_locus_tag=RM680_04820
NZ_JAVRJI010000004.1	Protein Homology	CDS	218215	219039	.	+	0	ID=cds-WP_001829804.1;Parent=gene-RM680_RS04815;Dbxref=GenBank:WP_001829804.1;Name=WP_001829804.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501168.1;locus_tag=RM680_RS04815;product=RluA family pseudouridine synthase;protein_id=WP_001829804.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	219400	220785	.	-	.	ID=gene-RM680_RS04820;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=RM680_RS04820;old_locus_tag=RM680_04825
NZ_JAVRJI010000004.1	Protein Homology	CDS	219400	220785	.	-	0	ID=cds-WP_001829862.1;Parent=gene-RM680_RS04820;Dbxref=GenBank:WP_001829862.1;Name=WP_001829862.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116229.1;locus_tag=RM680_RS04820;product=class II fumarate hydratase;protein_id=WP_001829862.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	220970	221374	.	-	.	ID=gene-RM680_RS04825;Name=RM680_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04825;old_locus_tag=RM680_04830
NZ_JAVRJI010000004.1	Protein Homology	CDS	220970	221374	.	-	0	ID=cds-WP_240232618.1;Parent=gene-RM680_RS04825;Dbxref=GenBank:WP_240232618.1;Name=WP_240232618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474495.1;locus_tag=RM680_RS04825;product=hypothetical protein;protein_id=WP_240232618.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	221530	221709	.	-	.	ID=gene-RM680_RS04830;Name=RM680_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04830;old_locus_tag=RM680_04835
NZ_JAVRJI010000004.1	Protein Homology	CDS	221530	221709	.	-	0	ID=cds-WP_002468490.1;Parent=gene-RM680_RS04830;Dbxref=GenBank:WP_002468490.1;Name=WP_002468490.1;Ontology_term=GO:0090729;gbkey=CDS;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468490.1;locus_tag=RM680_RS04830;product=SAS053 family DNA gyrase inhibitor;protein_id=WP_002468490.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	221733	222332	.	-	.	ID=gene-RM680_RS04835;Name=RM680_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04835;old_locus_tag=RM680_04840
NZ_JAVRJI010000004.1	Protein Homology	CDS	221733	222332	.	-	0	ID=cds-WP_002486232.1;Parent=gene-RM680_RS04835;Dbxref=GenBank:WP_002486232.1;Name=WP_002486232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500484.1;locus_tag=RM680_RS04835;product=6-phosphogluconolactonase;protein_id=WP_002486232.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	222490	222960	.	-	.	ID=gene-RM680_RS04840;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=RM680_RS04840;old_locus_tag=RM680_04845
NZ_JAVRJI010000004.1	Protein Homology	CDS	222490	222960	.	-	0	ID=cds-WP_001829836.1;Parent=gene-RM680_RS04840;Dbxref=GenBank:WP_001829836.1;Name=WP_001829836.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500485.1;locus_tag=RM680_RS04840;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_001829836.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	222957	224087	.	-	.	ID=gene-RM680_RS04845;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=RM680_RS04845;old_locus_tag=RM680_04850
NZ_JAVRJI010000004.1	Protein Homology	CDS	222957	224087	.	-	0	ID=cds-WP_001829814.1;Parent=gene-RM680_RS04845;Dbxref=GenBank:WP_001829814.1;Name=WP_001829814.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829814.1;locus_tag=RM680_RS04845;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_001829814.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	224302	224451	.	-	.	ID=gene-RM680_RS04850;Name=RM680_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04850;old_locus_tag=RM680_04855
NZ_JAVRJI010000004.1	GeneMarkS-2+	CDS	224302	224451	.	-	0	ID=cds-WP_002468809.1;Parent=gene-RM680_RS04850;Dbxref=GenBank:WP_002468809.1;Name=WP_002468809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS04850;product=hypothetical protein;protein_id=WP_002468809.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	224948	225670	.	-	.	ID=gene-RM680_RS04855;Name=RM680_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04855;old_locus_tag=RM680_04860
NZ_JAVRJI010000004.1	Protein Homology	CDS	224948	225670	.	-	0	ID=cds-WP_001829838.1;Parent=gene-RM680_RS04855;Dbxref=GenBank:WP_001829838.1;Name=WP_001829838.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465289.1;locus_tag=RM680_RS04855;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_001829838.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	225663	227081	.	-	.	ID=gene-RM680_RS04860;Name=RM680_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04860;old_locus_tag=RM680_04865
NZ_JAVRJI010000004.1	Protein Homology	CDS	225663	227081	.	-	0	ID=cds-WP_002456348.1;Parent=gene-RM680_RS04860;Dbxref=GenBank:WP_002456348.1;Name=WP_002456348.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190,GO:0055052;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468504.1;locus_tag=RM680_RS04860;product=ABC transporter substrate-binding protein/permease;protein_id=WP_002456348.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	227359	228417	.	-	.	ID=gene-RM680_RS04865;Name=RM680_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04865;old_locus_tag=RM680_04870
NZ_JAVRJI010000004.1	Protein Homology	CDS	227359	228417	.	-	0	ID=cds-WP_311563517.1;Parent=gene-RM680_RS04865;Dbxref=GenBank:WP_311563517.1;Name=WP_311563517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489307.1;locus_tag=RM680_RS04865;product=PTS transporter subunit IIC;protein_id=WP_311563517.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	228643	229491	.	-	.	ID=gene-RM680_RS04870;Name=RM680_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04870;old_locus_tag=RM680_04875
NZ_JAVRJI010000004.1	Protein Homology	CDS	228643	229491	.	-	0	ID=cds-WP_001829860.1;Parent=gene-RM680_RS04870;Dbxref=GenBank:WP_001829860.1;Name=WP_001829860.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476988.1;locus_tag=RM680_RS04870;product=trypsin-like serine peptidase;protein_id=WP_001829860.1;transl_table=11
NZ_JAVRJI010000004.1	RefSeq	gene	229810	229893	.	-	.	ID=gene-RM680_RS04875;Name=RM680_RS04875;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04875;old_locus_tag=RM680_04880
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	229810	229893	.	-	.	ID=rna-RM680_RS04875;Parent=gene-RM680_RS04875;anticodon=(pos:complement(229857..229859));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04875;product=tRNA-Leu
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	229810	229893	.	-	.	ID=exon-RM680_RS04875-1;Parent=rna-RM680_RS04875;anticodon=(pos:complement(229857..229859));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04875;product=tRNA-Leu
NZ_JAVRJI010000004.1	RefSeq	gene	229934	230008	.	-	.	ID=gene-RM680_RS04880;Name=RM680_RS04880;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04880;old_locus_tag=RM680_04885
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	229934	230008	.	-	.	ID=rna-RM680_RS04880;Parent=gene-RM680_RS04880;anticodon=(pos:complement(229973..229975));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04880;product=tRNA-Gly
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	229934	230008	.	-	.	ID=exon-RM680_RS04880-1;Parent=rna-RM680_RS04880;anticodon=(pos:complement(229973..229975));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04880;product=tRNA-Gly
NZ_JAVRJI010000004.1	RefSeq	gene	230020	230094	.	-	.	ID=gene-RM680_RS04885;Name=RM680_RS04885;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04885;old_locus_tag=RM680_04890
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	230020	230094	.	-	.	ID=rna-RM680_RS04885;Parent=gene-RM680_RS04885;anticodon=(pos:complement(230059..230061));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04885;product=tRNA-Gly
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	230020	230094	.	-	.	ID=exon-RM680_RS04885-1;Parent=rna-RM680_RS04885;anticodon=(pos:complement(230059..230061));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04885;product=tRNA-Gly
NZ_JAVRJI010000004.1	RefSeq	gene	230109	230183	.	-	.	ID=gene-RM680_RS04890;Name=RM680_RS04890;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04890;old_locus_tag=RM680_04895
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	230109	230183	.	-	.	ID=rna-RM680_RS04890;Parent=gene-RM680_RS04890;anticodon=(pos:complement(230148..230150));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04890;product=tRNA-Gly
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	230109	230183	.	-	.	ID=exon-RM680_RS04890-1;Parent=rna-RM680_RS04890;anticodon=(pos:complement(230148..230150));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04890;product=tRNA-Gly
NZ_JAVRJI010000004.1	RefSeq	gene	230193	230266	.	-	.	ID=gene-RM680_RS04895;Name=RM680_RS04895;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04895;old_locus_tag=RM680_04900
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	230193	230266	.	-	.	ID=rna-RM680_RS04895;Parent=gene-RM680_RS04895;anticodon=(pos:complement(230232..230234));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04895;product=tRNA-Cys
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	230193	230266	.	-	.	ID=exon-RM680_RS04895-1;Parent=rna-RM680_RS04895;anticodon=(pos:complement(230232..230234));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04895;product=tRNA-Cys
NZ_JAVRJI010000004.1	RefSeq	gene	230272	230343	.	-	.	ID=gene-RM680_RS04900;Name=RM680_RS04900;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04900;old_locus_tag=RM680_04905
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	230272	230343	.	-	.	ID=rna-RM680_RS04900;Parent=gene-RM680_RS04900;anticodon=(pos:complement(230309..230311));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04900;product=tRNA-Gln
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	230272	230343	.	-	.	ID=exon-RM680_RS04900-1;Parent=rna-RM680_RS04900;anticodon=(pos:complement(230309..230311));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04900;product=tRNA-Gln
NZ_JAVRJI010000004.1	RefSeq	gene	230355	230427	.	-	.	ID=gene-RM680_RS04905;Name=RM680_RS04905;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04905;old_locus_tag=RM680_04910
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	230355	230427	.	-	.	ID=rna-RM680_RS04905;Parent=gene-RM680_RS04905;anticodon=(pos:complement(230392..230394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04905;product=tRNA-His
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	230355	230427	.	-	.	ID=exon-RM680_RS04905-1;Parent=rna-RM680_RS04905;anticodon=(pos:complement(230392..230394));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04905;product=tRNA-His
NZ_JAVRJI010000004.1	RefSeq	gene	230430	230503	.	-	.	ID=gene-RM680_RS04910;Name=RM680_RS04910;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04910;old_locus_tag=RM680_04915
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	230430	230503	.	-	.	ID=rna-RM680_RS04910;Parent=gene-RM680_RS04910;anticodon=(pos:complement(230469..230471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04910;product=tRNA-Trp
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	230430	230503	.	-	.	ID=exon-RM680_RS04910-1;Parent=rna-RM680_RS04910;anticodon=(pos:complement(230469..230471));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04910;product=tRNA-Trp
NZ_JAVRJI010000004.1	RefSeq	gene	230512	230595	.	-	.	ID=gene-RM680_RS04915;Name=RM680_RS04915;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04915;old_locus_tag=RM680_04920
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	230512	230595	.	-	.	ID=rna-RM680_RS04915;Parent=gene-RM680_RS04915;anticodon=(pos:complement(230559..230561));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04915;product=tRNA-Tyr
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	230512	230595	.	-	.	ID=exon-RM680_RS04915-1;Parent=rna-RM680_RS04915;anticodon=(pos:complement(230559..230561));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04915;product=tRNA-Tyr
NZ_JAVRJI010000004.1	RefSeq	gene	230600	230675	.	-	.	ID=gene-RM680_RS04920;Name=RM680_RS04920;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04920;old_locus_tag=RM680_04925
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	230600	230675	.	-	.	ID=rna-RM680_RS04920;Parent=gene-RM680_RS04920;anticodon=(pos:complement(230640..230642));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04920;product=tRNA-Thr
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	230600	230675	.	-	.	ID=exon-RM680_RS04920-1;Parent=rna-RM680_RS04920;anticodon=(pos:complement(230640..230642));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04920;product=tRNA-Thr
NZ_JAVRJI010000004.1	RefSeq	gene	230684	230756	.	-	.	ID=gene-RM680_RS04925;Name=RM680_RS04925;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04925;old_locus_tag=RM680_04930
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	230684	230756	.	-	.	ID=rna-RM680_RS04925;Parent=gene-RM680_RS04925;anticodon=(pos:complement(230721..230723));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04925;product=tRNA-Phe
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	230684	230756	.	-	.	ID=exon-RM680_RS04925-1;Parent=rna-RM680_RS04925;anticodon=(pos:complement(230721..230723));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04925;product=tRNA-Phe
NZ_JAVRJI010000004.1	RefSeq	gene	230861	230934	.	-	.	ID=gene-RM680_RS04930;Name=RM680_RS04930;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04930;old_locus_tag=RM680_04935
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	230861	230934	.	-	.	ID=rna-RM680_RS04930;Parent=gene-RM680_RS04930;anticodon=(pos:complement(230898..230900));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04930;product=tRNA-Met
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	230861	230934	.	-	.	ID=exon-RM680_RS04930-1;Parent=rna-RM680_RS04930;anticodon=(pos:complement(230898..230900));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04930;product=tRNA-Met
NZ_JAVRJI010000004.1	RefSeq	gene	230946	231038	.	-	.	ID=gene-RM680_RS04935;Name=RM680_RS04935;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04935;old_locus_tag=RM680_04940
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	230946	231038	.	-	.	ID=rna-RM680_RS04935;Parent=gene-RM680_RS04935;anticodon=(pos:complement(231000..231002));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04935;product=tRNA-Ser
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	230946	231038	.	-	.	ID=exon-RM680_RS04935-1;Parent=rna-RM680_RS04935;anticodon=(pos:complement(231000..231002));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04935;product=tRNA-Ser
NZ_JAVRJI010000004.1	RefSeq	gene	231076	231151	.	-	.	ID=gene-RM680_RS04940;Name=RM680_RS04940;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04940;old_locus_tag=RM680_04945
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	231076	231151	.	-	.	ID=rna-RM680_RS04940;Parent=gene-RM680_RS04940;anticodon=(pos:complement(231116..231118));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04940;product=tRNA-Asp
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	231076	231151	.	-	.	ID=exon-RM680_RS04940-1;Parent=rna-RM680_RS04940;anticodon=(pos:complement(231116..231118));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04940;product=tRNA-Asp
NZ_JAVRJI010000004.1	RefSeq	gene	231159	231248	.	-	.	ID=gene-RM680_RS04945;Name=RM680_RS04945;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04945;old_locus_tag=RM680_04950
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	231159	231248	.	-	.	ID=rna-RM680_RS04945;Parent=gene-RM680_RS04945;anticodon=(pos:complement(231210..231212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04945;product=tRNA-Ser
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	231159	231248	.	-	.	ID=exon-RM680_RS04945-1;Parent=rna-RM680_RS04945;anticodon=(pos:complement(231210..231212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04945;product=tRNA-Ser
NZ_JAVRJI010000004.1	RefSeq	gene	231258	231331	.	-	.	ID=gene-RM680_RS04950;Name=RM680_RS04950;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04950;old_locus_tag=RM680_04955
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	231258	231331	.	-	.	ID=rna-RM680_RS04950;Parent=gene-RM680_RS04950;anticodon=(pos:complement(231295..231297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04950;product=tRNA-Ile
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	231258	231331	.	-	.	ID=exon-RM680_RS04950-1;Parent=rna-RM680_RS04950;anticodon=(pos:complement(231295..231297));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04950;product=tRNA-Ile
NZ_JAVRJI010000004.1	RefSeq	gene	231359	231432	.	-	.	ID=gene-RM680_RS04955;Name=RM680_RS04955;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04955;old_locus_tag=RM680_04960
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	231359	231432	.	-	.	ID=rna-RM680_RS04955;Parent=gene-RM680_RS04955;anticodon=(pos:complement(231396..231398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04955;product=tRNA-Met
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	231359	231432	.	-	.	ID=exon-RM680_RS04955-1;Parent=rna-RM680_RS04955;anticodon=(pos:complement(231396..231398));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04955;product=tRNA-Met
NZ_JAVRJI010000004.1	RefSeq	gene	231457	231532	.	-	.	ID=gene-RM680_RS04960;Name=RM680_RS04960;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS04960;old_locus_tag=RM680_04965
NZ_JAVRJI010000004.1	tRNAscan-SE	tRNA	231457	231532	.	-	.	ID=rna-RM680_RS04960;Parent=gene-RM680_RS04960;anticodon=(pos:complement(231497..231499));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04960;product=tRNA-Ala
NZ_JAVRJI010000004.1	tRNAscan-SE	exon	231457	231532	.	-	.	ID=exon-RM680_RS04960-1;Parent=rna-RM680_RS04960;anticodon=(pos:complement(231497..231499));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS04960;product=tRNA-Ala
##sequence-region NZ_JAVRJI010000005.1 1 206255
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000005.1	RefSeq	region	1	206255	.	+	.	ID=NZ_JAVRJI010000005.1:1..206255;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000005.1	RefSeq	gene	28	162	.	+	.	ID=gene-RM680_RS04965;Name=RM680_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04965;old_locus_tag=RM680_04970
NZ_JAVRJI010000005.1	Protein Homology	CDS	28	162	.	+	0	ID=cds-WP_001830095.1;Parent=gene-RM680_RS04965;Dbxref=GenBank:WP_001830095.1;Name=WP_001830095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830095.1;locus_tag=RM680_RS04965;product=beta-class phenol-soluble modulin;protein_id=WP_001830095.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	218	352	.	+	.	ID=gene-RM680_RS04970;Name=RM680_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04970;old_locus_tag=RM680_04975
NZ_JAVRJI010000005.1	Protein Homology	CDS	218	352	.	+	0	ID=cds-WP_001830095.1-2;Parent=gene-RM680_RS04970;Dbxref=GenBank:WP_001830095.1;Name=WP_001830095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830095.1;locus_tag=RM680_RS04970;product=beta-class phenol-soluble modulin;protein_id=WP_001830095.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	460	1146	.	+	.	ID=gene-RM680_RS04975;Name=RM680_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04975;old_locus_tag=RM680_04980
NZ_JAVRJI010000005.1	Protein Homology	CDS	460	1146	.	+	0	ID=cds-WP_001830150.1;Parent=gene-RM680_RS04975;Dbxref=GenBank:WP_001830150.1;Name=WP_001830150.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511240.1;locus_tag=RM680_RS04975;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WP_001830150.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	1255	1695	.	-	.	ID=gene-RM680_RS04980;Name=RM680_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS04980;old_locus_tag=RM680_04985
NZ_JAVRJI010000005.1	Protein Homology	CDS	1255	1695	.	-	0	ID=cds-WP_001830066.1;Parent=gene-RM680_RS04980;Dbxref=GenBank:WP_001830066.1;Name=WP_001830066.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446220.1;locus_tag=RM680_RS04980;product=N-acetyltransferase;protein_id=WP_001830066.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	1879	3492	.	+	.	ID=gene-RM680_RS04985;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=RM680_RS04985;old_locus_tag=RM680_04990
NZ_JAVRJI010000005.1	Protein Homology	CDS	1879	3492	.	+	0	ID=cds-WP_311563518.1;Parent=gene-RM680_RS04985;Dbxref=GenBank:WP_311563518.1;Name=WP_311563518.1;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485008.1;locus_tag=RM680_RS04985;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=WP_311563518.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	3635	4066	.	+	.	ID=gene-RM680_RS04990;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=RM680_RS04990;old_locus_tag=RM680_04995
NZ_JAVRJI010000005.1	Protein Homology	CDS	3635	4066	.	+	0	ID=cds-WP_001830185.1;Parent=gene-RM680_RS04990;Dbxref=GenBank:WP_001830185.1;Name=WP_001830185.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900043.1;locus_tag=RM680_RS04990;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_001830185.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	4081	5016	.	+	.	ID=gene-RM680_RS04995;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=RM680_RS04995;old_locus_tag=RM680_05000
NZ_JAVRJI010000005.1	Protein Homology	CDS	4081	5016	.	+	0	ID=cds-WP_001830134.1;Parent=gene-RM680_RS04995;Dbxref=GenBank:WP_001830134.1;Name=WP_001830134.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724209.1;locus_tag=RM680_RS04995;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_001830134.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	5029	5430	.	+	.	ID=gene-RM680_RS05000;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=RM680_RS05000;old_locus_tag=RM680_05005
NZ_JAVRJI010000005.1	Protein Homology	CDS	5029	5430	.	+	0	ID=cds-WP_002446224.1;Parent=gene-RM680_RS05000;Dbxref=GenBank:WP_002446224.1;Name=WP_002446224.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499686.1;locus_tag=RM680_RS05000;product=cell division protein FtsL;protein_id=WP_002446224.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	5411	7738	.	+	.	ID=gene-RM680_RS05005;Name=RM680_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05005;old_locus_tag=RM680_05010
NZ_JAVRJI010000005.1	Protein Homology	CDS	5411	7738	.	+	0	ID=cds-WP_002439409.1;Parent=gene-RM680_RS05005;Dbxref=GenBank:WP_002439409.1;Name=WP_002439409.1;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368615.1;locus_tag=RM680_RS05005;product=penicillin-binding protein;protein_id=WP_002439409.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	7927	8892	.	+	.	ID=gene-RM680_RS05010;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=RM680_RS05010;old_locus_tag=RM680_05015
NZ_JAVRJI010000005.1	Protein Homology	CDS	7927	8892	.	+	0	ID=cds-WP_001830122.1;Parent=gene-RM680_RS05010;Dbxref=GenBank:WP_001830122.1;Name=WP_001830122.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499688.1;locus_tag=RM680_RS05010;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_001830122.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	8894	10243	.	+	.	ID=gene-RM680_RS05015;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=RM680_RS05015;old_locus_tag=RM680_05020
NZ_JAVRJI010000005.1	Protein Homology	CDS	8894	10243	.	+	0	ID=cds-WP_001830127.1;Parent=gene-RM680_RS05015;Dbxref=GenBank:WP_001830127.1;Name=WP_001830127.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499689.1;locus_tag=RM680_RS05015;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_001830127.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	10259	11650	.	+	.	ID=gene-RM680_RS05020;Name=RM680_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05020;old_locus_tag=RM680_05025
NZ_JAVRJI010000005.1	Protein Homology	CDS	10259	11650	.	+	0	ID=cds-WP_002470268.1;Parent=gene-RM680_RS05020;Dbxref=GenBank:WP_002470268.1;Name=WP_002470268.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503084.1;locus_tag=RM680_RS05020;product=cell division protein FtsQ/DivIB;protein_id=WP_002470268.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	11756	13150	.	+	.	ID=gene-RM680_RS05025;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=RM680_RS05025;old_locus_tag=RM680_05030
NZ_JAVRJI010000005.1	Protein Homology	CDS	11756	13150	.	+	0	ID=cds-WP_002489413.1;Parent=gene-RM680_RS05025;Dbxref=GenBank:WP_002489413.1;Name=WP_002489413.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499691.1;locus_tag=RM680_RS05025;product=cell division protein FtsA;protein_id=WP_002489413.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	13183	14367	.	+	.	ID=gene-RM680_RS05030;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=RM680_RS05030;old_locus_tag=RM680_05035
NZ_JAVRJI010000005.1	Protein Homology	CDS	13183	14367	.	+	0	ID=cds-WP_002439417.1;Parent=gene-RM680_RS05030;Dbxref=GenBank:WP_002439417.1;Name=WP_002439417.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499692.1;locus_tag=RM680_RS05030;product=cell division protein FtsZ;protein_id=WP_002439417.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	14787	15578	.	+	.	ID=gene-RM680_RS05035;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=RM680_RS05035;old_locus_tag=RM680_05040
NZ_JAVRJI010000005.1	Protein Homology	CDS	14787	15578	.	+	0	ID=cds-WP_002439418.1;Parent=gene-RM680_RS05035;Dbxref=GenBank:WP_002439418.1;Name=WP_002439418.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439418.1;locus_tag=RM680_RS05035;product=peptidoglycan editing factor PgeF;protein_id=WP_002439418.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	15604	16272	.	+	.	ID=gene-RM680_RS05040;Name=RM680_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05040;old_locus_tag=RM680_05045
NZ_JAVRJI010000005.1	Protein Homology	CDS	15604	16272	.	+	0	ID=cds-WP_001830146.1;Parent=gene-RM680_RS05040;Dbxref=GenBank:WP_001830146.1;Name=WP_001830146.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498392.1;locus_tag=RM680_RS05040;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_001830146.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	16286	16879	.	+	.	ID=gene-RM680_RS05045;Name=RM680_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05045;old_locus_tag=RM680_05050
NZ_JAVRJI010000005.1	Protein Homology	CDS	16286	16879	.	+	0	ID=cds-WP_001830143.1;Parent=gene-RM680_RS05045;Dbxref=GenBank:WP_001830143.1;Name=WP_001830143.1;Ontology_term=GO:0000917,GO:0043093,GO:0090529;gbkey=CDS;go_process=division septum assembly|0000917||IEA,FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446233.1;locus_tag=RM680_RS05045;product=cell division protein SepF;protein_id=WP_001830143.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	16891	17181	.	+	.	ID=gene-RM680_RS05050;Name=RM680_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05050;old_locus_tag=RM680_05055
NZ_JAVRJI010000005.1	Protein Homology	CDS	16891	17181	.	+	0	ID=cds-WP_001830086.1;Parent=gene-RM680_RS05050;Dbxref=GenBank:WP_001830086.1;Name=WP_001830086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830086.1;locus_tag=RM680_RS05050;product=YggT family protein;protein_id=WP_001830086.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	17322	18098	.	+	.	ID=gene-RM680_RS05055;Name=RM680_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05055;old_locus_tag=RM680_05060
NZ_JAVRJI010000005.1	Protein Homology	CDS	17322	18098	.	+	0	ID=cds-WP_044117632.1;Parent=gene-RM680_RS05055;Dbxref=GenBank:WP_044117632.1;Name=WP_044117632.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001827493.1;locus_tag=RM680_RS05055;product=YlmH family RNA-binding protein;protein_id=WP_044117632.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	18121	18777	.	+	.	ID=gene-RM680_RS05060;Name=RM680_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05060;old_locus_tag=RM680_05065
NZ_JAVRJI010000005.1	Protein Homology	CDS	18121	18777	.	+	0	ID=cds-WP_001830163.1;Parent=gene-RM680_RS05060;Dbxref=GenBank:WP_001830163.1;Name=WP_001830163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475942.1;locus_tag=RM680_RS05060;product=DivIVA domain-containing protein;protein_id=WP_001830163.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	19092	21842	.	+	.	ID=gene-RM680_RS05065;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=RM680_RS05065;old_locus_tag=RM680_05070
NZ_JAVRJI010000005.1	Protein Homology	CDS	19092	21842	.	+	0	ID=cds-WP_002439427.1;Parent=gene-RM680_RS05065;Dbxref=GenBank:WP_002439427.1;Name=WP_002439427.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499699.1;locus_tag=RM680_RS05065;product=isoleucine--tRNA ligase;protein_id=WP_002439427.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	22599	23396	.	+	.	ID=gene-RM680_RS05070;Name=RM680_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05070;old_locus_tag=RM680_05075
NZ_JAVRJI010000005.1	Protein Homology	CDS	22599	23396	.	+	0	ID=cds-WP_001830106.1;Parent=gene-RM680_RS05070;Dbxref=GenBank:WP_001830106.1;Name=WP_001830106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830106.1;locus_tag=RM680_RS05070;product=VOC family protein;protein_id=WP_001830106.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	23401	23871	.	+	.	ID=gene-RM680_RS05075;Name=RM680_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05075;old_locus_tag=RM680_05080
NZ_JAVRJI010000005.1	Protein Homology	CDS	23401	23871	.	+	0	ID=cds-WP_002439429.1;Parent=gene-RM680_RS05075;Dbxref=GenBank:WP_002439429.1;Name=WP_002439429.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470266.1;locus_tag=RM680_RS05075;product=CHAP domain-containing protein;protein_id=WP_002439429.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	23960	24445	.	+	.	ID=gene-RM680_RS05080;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=RM680_RS05080;old_locus_tag=RM680_05085
NZ_JAVRJI010000005.1	Protein Homology	CDS	23960	24445	.	+	0	ID=cds-WP_002494430.1;Parent=gene-RM680_RS05080;Dbxref=GenBank:WP_002494430.1;Name=WP_002494430.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498388.1;locus_tag=RM680_RS05080;product=signal peptidase II;protein_id=WP_002494430.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	24448	25365	.	+	.	ID=gene-RM680_RS05085;Name=RM680_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05085;old_locus_tag=RM680_05090
NZ_JAVRJI010000005.1	Protein Homology	CDS	24448	25365	.	+	0	ID=cds-WP_001830176.1;Parent=gene-RM680_RS05085;Dbxref=GenBank:WP_001830176.1;Name=WP_001830176.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499703.1;locus_tag=RM680_RS05085;product=RluA family pseudouridine synthase;protein_id=WP_001830176.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	25668	26195	.	+	.	ID=gene-RM680_RS05090;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=RM680_RS05090;old_locus_tag=RM680_05095
NZ_JAVRJI010000005.1	Protein Homology	CDS	25668	26195	.	+	0	ID=cds-WP_001830167.1;Parent=gene-RM680_RS05090;Dbxref=GenBank:WP_001830167.1;Name=WP_001830167.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499704.1;locus_tag=RM680_RS05090;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_001830167.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	26428	27735	.	+	.	ID=gene-RM680_RS05095;Name=RM680_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05095;old_locus_tag=RM680_05100
NZ_JAVRJI010000005.1	Protein Homology	CDS	26428	27735	.	+	0	ID=cds-WP_001830174.1;Parent=gene-RM680_RS05095;Dbxref=GenBank:WP_001830174.1;Name=WP_001830174.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499705.1;locus_tag=RM680_RS05095;product=uracil-xanthine permease family protein;protein_id=WP_001830174.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	27761	28642	.	+	.	ID=gene-RM680_RS05100;Name=RM680_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05100;old_locus_tag=RM680_05105
NZ_JAVRJI010000005.1	Protein Homology	CDS	27761	28642	.	+	0	ID=cds-WP_001830068.1;Parent=gene-RM680_RS05100;Dbxref=GenBank:WP_001830068.1;Name=WP_001830068.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499706.1;locus_tag=RM680_RS05100;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_001830068.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	28660	29937	.	+	.	ID=gene-RM680_RS05105;Name=RM680_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05105;old_locus_tag=RM680_05110
NZ_JAVRJI010000005.1	Protein Homology	CDS	28660	29937	.	+	0	ID=cds-WP_001830129.1;Parent=gene-RM680_RS05105;Dbxref=GenBank:WP_001830129.1;Name=WP_001830129.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499707.1;locus_tag=RM680_RS05105;product=dihydroorotase;protein_id=WP_001830129.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	29938	31038	.	+	.	ID=gene-RM680_RS05110;Name=RM680_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05110;old_locus_tag=RM680_05115
NZ_JAVRJI010000005.1	Protein Homology	CDS	29938	31038	.	+	0	ID=cds-WP_001830071.1;Parent=gene-RM680_RS05110;Dbxref=GenBank:WP_001830071.1;Name=WP_001830071.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499708.1;locus_tag=RM680_RS05110;product=carbamoyl phosphate synthase small subunit;protein_id=WP_001830071.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	31031	34204	.	+	.	ID=gene-RM680_RS05115;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=RM680_RS05115;old_locus_tag=RM680_05120
NZ_JAVRJI010000005.1	Protein Homology	CDS	31031	34204	.	+	0	ID=cds-WP_311563519.1;Parent=gene-RM680_RS05115;Dbxref=GenBank:WP_311563519.1;Name=WP_311563519.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499709.1;locus_tag=RM680_RS05115;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_311563519.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	34239	34931	.	+	.	ID=gene-RM680_RS05120;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=RM680_RS05120;old_locus_tag=RM680_05125
NZ_JAVRJI010000005.1	Protein Homology	CDS	34239	34931	.	+	0	ID=cds-WP_002469379.1;Parent=gene-RM680_RS05120;Dbxref=GenBank:WP_002469379.1;Name=WP_002469379.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457397.1;locus_tag=RM680_RS05120;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_002469379.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	34932	35543	.	+	.	ID=gene-RM680_RS05125;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=RM680_RS05125;old_locus_tag=RM680_05130
NZ_JAVRJI010000005.1	Protein Homology	CDS	34932	35543	.	+	0	ID=cds-WP_001830179.1;Parent=gene-RM680_RS05125;Dbxref=GenBank:WP_001830179.1;Name=WP_001830179.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499711.1;locus_tag=RM680_RS05125;product=orotate phosphoribosyltransferase;protein_id=WP_001830179.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	35569	35775	.	+	.	ID=gene-RM680_RS05130;Name=RM680_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05130;old_locus_tag=RM680_05135
NZ_JAVRJI010000005.1	Protein Homology	CDS	35569	35775	.	+	0	ID=cds-WP_001830061.1;Parent=gene-RM680_RS05130;Dbxref=GenBank:WP_001830061.1;Name=WP_001830061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830061.1;locus_tag=RM680_RS05130;product=hypothetical protein;protein_id=WP_001830061.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	36313	36720	.	+	.	ID=gene-RM680_RS05135;Name=RM680_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05135;old_locus_tag=RM680_05140
NZ_JAVRJI010000005.1	Protein Homology	CDS	36313	36720	.	+	0	ID=cds-WP_001830181.1;Parent=gene-RM680_RS05135;Dbxref=GenBank:WP_001830181.1;Name=WP_001830181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464312.1;locus_tag=RM680_RS05135;product=VOC family protein;protein_id=WP_001830181.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	36782	38479	.	-	.	ID=gene-RM680_RS05140;Name=RM680_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05140;old_locus_tag=RM680_05145
NZ_JAVRJI010000005.1	Protein Homology	CDS	36782	38479	.	-	0	ID=cds-WP_002456587.1;Parent=gene-RM680_RS05140;Dbxref=GenBank:WP_002456587.1;Name=WP_002456587.1;Ontology_term=GO:0072344,GO:0001968,GO:1990112;gbkey=CDS;go_component=RQC complex|1990112||IEA;go_function=fibronectin binding|0001968||IEA;go_process=rescue of stalled ribosome|0072344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499714.1;locus_tag=RM680_RS05140;product=Rqc2 family fibronectin-binding protein;protein_id=WP_002456587.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	38749	39372	.	+	.	ID=gene-RM680_RS05145;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=RM680_RS05145;old_locus_tag=RM680_05150
NZ_JAVRJI010000005.1	Protein Homology	CDS	38749	39372	.	+	0	ID=cds-WP_001830096.1;Parent=gene-RM680_RS05145;Dbxref=GenBank:WP_001830096.1;Name=WP_001830096.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499715.1;locus_tag=RM680_RS05145;product=guanylate kinase;protein_id=WP_001830096.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	39372	39584	.	+	.	ID=gene-RM680_RS05150;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=RM680_RS05150;old_locus_tag=RM680_05155
NZ_JAVRJI010000005.1	Protein Homology	CDS	39372	39584	.	+	0	ID=cds-WP_002456586.1;Parent=gene-RM680_RS05150;Dbxref=GenBank:WP_002456586.1;Name=WP_002456586.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486612.1;locus_tag=RM680_RS05150;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_002456586.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	40122	41321	.	+	.	ID=gene-RM680_RS05155;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=RM680_RS05155;old_locus_tag=RM680_05160
NZ_JAVRJI010000005.1	Protein Homology	CDS	40122	41321	.	+	0	ID=cds-WP_001830125.1;Parent=gene-RM680_RS05155;Dbxref=GenBank:WP_001830125.1;Name=WP_001830125.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499717.1;locus_tag=RM680_RS05155;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_001830125.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	41321	43729	.	+	.	ID=gene-RM680_RS05160;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=RM680_RS05160;old_locus_tag=RM680_05165
NZ_JAVRJI010000005.1	Protein Homology	CDS	41321	43729	.	+	0	ID=cds-WP_020368043.1;Parent=gene-RM680_RS05160;Dbxref=GenBank:WP_020368043.1;Name=WP_020368043.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499718.1;locus_tag=RM680_RS05160;product=primosomal protein N';protein_id=WP_020368043.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	43837	44040	.	-	.	ID=gene-RM680_RS05165;Name=RM680_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05165;old_locus_tag=RM680_05170
NZ_JAVRJI010000005.1	Protein Homology	CDS	43837	44040	.	-	0	ID=cds-WP_001830141.1;Parent=gene-RM680_RS05165;Dbxref=GenBank:WP_001830141.1;Name=WP_001830141.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830141.1;locus_tag=RM680_RS05165;product=TM2 domain-containing protein;protein_id=WP_001830141.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	44262	44750	.	+	.	ID=gene-RM680_RS05170;Name=RM680_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05170;old_locus_tag=RM680_05175
NZ_JAVRJI010000005.1	Protein Homology	CDS	44262	44750	.	+	0	ID=cds-WP_001830064.1;Parent=gene-RM680_RS05170;Dbxref=GenBank:WP_001830064.1;Name=WP_001830064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446255.1;locus_tag=RM680_RS05170;product=peptide deformylase;protein_id=WP_001830064.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	44743	45675	.	+	.	ID=gene-RM680_RS05175;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=RM680_RS05175;old_locus_tag=RM680_05180
NZ_JAVRJI010000005.1	Protein Homology	CDS	44743	45675	.	+	0	ID=cds-WP_002439455.1;Parent=gene-RM680_RS05175;Dbxref=GenBank:WP_002439455.1;Name=WP_002439455.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363823.1;locus_tag=RM680_RS05175;product=methionyl-tRNA formyltransferase;protein_id=WP_002439455.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	45672	46979	.	+	.	ID=gene-RM680_RS05180;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=RM680_RS05180;old_locus_tag=RM680_05185
NZ_JAVRJI010000005.1	Protein Homology	CDS	45672	46979	.	+	0	ID=cds-WP_002502438.1;Parent=gene-RM680_RS05180;Dbxref=GenBank:WP_002502438.1;Name=WP_002502438.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439457.1;locus_tag=RM680_RS05180;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_002502438.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	46982	48076	.	+	.	ID=gene-RM680_RS05185;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=RM680_RS05185;old_locus_tag=RM680_05190
NZ_JAVRJI010000005.1	Protein Homology	CDS	46982	48076	.	+	0	ID=cds-WP_002467865.1;Parent=gene-RM680_RS05185;Dbxref=GenBank:WP_002467865.1;Name=WP_002467865.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435140.1;locus_tag=RM680_RS05185;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_002467865.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	48083	48826	.	+	.	ID=gene-RM680_RS05190;Name=RM680_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05190;old_locus_tag=RM680_05195
NZ_JAVRJI010000005.1	Protein Homology	CDS	48083	48826	.	+	0	ID=cds-WP_002439460.1;Parent=gene-RM680_RS05190;Dbxref=GenBank:WP_002439460.1;Name=WP_002439460.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499725.1;locus_tag=RM680_RS05190;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WP_002439460.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	48823	50826	.	+	.	ID=gene-RM680_RS05195;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=protein_coding;locus_tag=RM680_RS05195;old_locus_tag=RM680_05200
NZ_JAVRJI010000005.1	Protein Homology	CDS	48823	50826	.	+	0	ID=cds-WP_002439462.1;Parent=gene-RM680_RS05195;Dbxref=GenBank:WP_002439462.1;Name=WP_002439462.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503415.1;locus_tag=RM680_RS05195;product=Stk1 family PASTA domain-containing Ser/Thr kinase;protein_id=WP_002439462.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	51134	52009	.	+	.	ID=gene-RM680_RS05200;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=RM680_RS05200;old_locus_tag=RM680_05205
NZ_JAVRJI010000005.1	Protein Homology	CDS	51134	52009	.	+	0	ID=cds-WP_002456227.1;Parent=gene-RM680_RS05200;Dbxref=GenBank:WP_002456227.1;Name=WP_002456227.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363819.1;locus_tag=RM680_RS05200;product=ribosome small subunit-dependent GTPase A;protein_id=WP_002456227.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	52010	52654	.	+	.	ID=gene-RM680_RS05205;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=RM680_RS05205;old_locus_tag=RM680_05210
NZ_JAVRJI010000005.1	Protein Homology	CDS	52010	52654	.	+	0	ID=cds-WP_001830173.1;Parent=gene-RM680_RS05205;Dbxref=GenBank:WP_001830173.1;Name=WP_001830173.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473242.1;locus_tag=RM680_RS05205;product=ribulose-phosphate 3-epimerase;protein_id=WP_001830173.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	52659	53294	.	+	.	ID=gene-RM680_RS05210;Name=RM680_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05210;old_locus_tag=RM680_05215
NZ_JAVRJI010000005.1	Protein Homology	CDS	52659	53294	.	+	0	ID=cds-WP_002489340.1;Parent=gene-RM680_RS05210;Dbxref=GenBank:WP_002489340.1;Name=WP_002489340.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830164.1;locus_tag=RM680_RS05210;product=thiamine diphosphokinase;protein_id=WP_002489340.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	53377	53565	.	-	.	ID=gene-RM680_RS05215;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=RM680_RS05215;old_locus_tag=RM680_05220
NZ_JAVRJI010000005.1	Protein Homology	CDS	53377	53565	.	-	0	ID=cds-WP_001830107.1;Parent=gene-RM680_RS05215;Dbxref=GenBank:WP_001830107.1;Name=WP_001830107.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1;locus_tag=RM680_RS05215;product=50S ribosomal protein L28;protein_id=WP_001830107.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	53923	54297	.	+	.	ID=gene-RM680_RS05220;Name=RM680_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05220;old_locus_tag=RM680_05225
NZ_JAVRJI010000005.1	Protein Homology	CDS	53923	54297	.	+	0	ID=cds-WP_001830156.1;Parent=gene-RM680_RS05220;Dbxref=GenBank:WP_001830156.1;Name=WP_001830156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494961.1;locus_tag=RM680_RS05220;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_001830156.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	54312	55970	.	+	.	ID=gene-RM680_RS05225;Name=fakA;gbkey=Gene;gene=fakA;gene_biotype=protein_coding;locus_tag=RM680_RS05225;old_locus_tag=RM680_05230
NZ_JAVRJI010000005.1	Protein Homology	CDS	54312	55970	.	+	0	ID=cds-WP_002489351.1;Parent=gene-RM680_RS05225;Dbxref=GenBank:WP_002489351.1;Name=WP_002489351.1;gbkey=CDS;gene=fakA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499732.1;locus_tag=RM680_RS05225;product=fatty acid kinase catalytic subunit FakA;protein_id=WP_002489351.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	56174	58222	.	+	.	ID=gene-RM680_RS05230;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=RM680_RS05230;old_locus_tag=RM680_05235
NZ_JAVRJI010000005.1	Protein Homology	CDS	56174	58222	.	+	0	ID=cds-WP_020368084.1;Parent=gene-RM680_RS05230;Dbxref=GenBank:WP_020368084.1;Name=WP_020368084.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499733.1;locus_tag=RM680_RS05230;product=ATP-dependent DNA helicase RecG;protein_id=WP_020368084.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	58381	58941	.	+	.	ID=gene-RM680_RS05235;Name=fapR;gbkey=Gene;gene=fapR;gene_biotype=protein_coding;locus_tag=RM680_RS05235;old_locus_tag=RM680_05240
NZ_JAVRJI010000005.1	Protein Homology	CDS	58381	58941	.	+	0	ID=cds-WP_001830099.1;Parent=gene-RM680_RS05235;Dbxref=GenBank:WP_001830099.1;Name=WP_001830099.1;Ontology_term=GO:0045717,GO:0045892,GO:0003700;gbkey=CDS;gene=fapR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of fatty acid biosynthetic process|0045717||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830099.1;locus_tag=RM680_RS05235;product=transcription factor FapR;protein_id=WP_001830099.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	58943	59920	.	+	.	ID=gene-RM680_RS05240;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=RM680_RS05240;old_locus_tag=RM680_05245
NZ_JAVRJI010000005.1	Protein Homology	CDS	58943	59920	.	+	0	ID=cds-WP_001830112.1;Parent=gene-RM680_RS05240;Dbxref=GenBank:WP_001830112.1;Name=WP_001830112.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476645.1;locus_tag=RM680_RS05240;product=phosphate acyltransferase PlsX;protein_id=WP_001830112.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	59922	60848	.	+	.	ID=gene-RM680_RS05245;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=RM680_RS05245;old_locus_tag=RM680_05250
NZ_JAVRJI010000005.1	Protein Homology	CDS	59922	60848	.	+	0	ID=cds-WP_001830062.1;Parent=gene-RM680_RS05245;Dbxref=GenBank:WP_001830062.1;Name=WP_001830062.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499736.1;locus_tag=RM680_RS05245;product=ACP S-malonyltransferase;protein_id=WP_001830062.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	60841	61575	.	+	.	ID=gene-RM680_RS05250;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=RM680_RS05250;old_locus_tag=RM680_05255
NZ_JAVRJI010000005.1	Protein Homology	CDS	60841	61575	.	+	0	ID=cds-WP_001830161.1;Parent=gene-RM680_RS05250;Dbxref=GenBank:WP_001830161.1;Name=WP_001830161.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499737.1;locus_tag=RM680_RS05250;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=WP_001830161.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	61802	62035	.	+	.	ID=gene-RM680_RS05255;Name=RM680_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05255;old_locus_tag=RM680_05260
NZ_JAVRJI010000005.1	Protein Homology	CDS	61802	62035	.	+	0	ID=cds-WP_001830184.1;Parent=gene-RM680_RS05255;Dbxref=GenBank:WP_001830184.1;Name=WP_001830184.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1;locus_tag=RM680_RS05255;product=acyl carrier protein;protein_id=WP_001830184.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	62150	62887	.	+	.	ID=gene-RM680_RS05260;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=RM680_RS05260;old_locus_tag=RM680_05265
NZ_JAVRJI010000005.1	Protein Homology	CDS	62150	62887	.	+	0	ID=cds-WP_002470220.1;Parent=gene-RM680_RS05260;Dbxref=GenBank:WP_002470220.1;Name=WP_002470220.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275967.1;locus_tag=RM680_RS05260;product=ribonuclease III;protein_id=WP_002470220.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	63014	66583	.	+	.	ID=gene-RM680_RS05265;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=RM680_RS05265;old_locus_tag=RM680_05270
NZ_JAVRJI010000005.1	Protein Homology	CDS	63014	66583	.	+	0	ID=cds-WP_002502436.1;Parent=gene-RM680_RS05265;Dbxref=GenBank:WP_002502436.1;Name=WP_002502436.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505738.1;locus_tag=RM680_RS05265;product=chromosome segregation protein SMC;protein_id=WP_002502436.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	66580	67806	.	+	.	ID=gene-RM680_RS05270;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=RM680_RS05270;old_locus_tag=RM680_05275
NZ_JAVRJI010000005.1	Protein Homology	CDS	66580	67806	.	+	0	ID=cds-WP_001830080.1;Parent=gene-RM680_RS05270;Dbxref=GenBank:WP_001830080.1;Name=WP_001830080.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496451.1;locus_tag=RM680_RS05270;product=signal recognition particle-docking protein FtsY;protein_id=WP_001830080.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	67808	68140	.	+	.	ID=gene-RM680_RS05275;Name=RM680_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05275;old_locus_tag=RM680_05280
NZ_JAVRJI010000005.1	Protein Homology	CDS	67808	68140	.	+	0	ID=cds-WP_002457379.1;Parent=gene-RM680_RS05275;Dbxref=GenBank:WP_002457379.1;Name=WP_002457379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499743.1;locus_tag=RM680_RS05275;product=putative DNA-binding protein;protein_id=WP_002457379.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	68171	69538	.	+	.	ID=gene-RM680_RS05280;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=RM680_RS05280;old_locus_tag=RM680_05285
NZ_JAVRJI010000005.1	Protein Homology	CDS	68171	69538	.	+	0	ID=cds-WP_001830113.1;Parent=gene-RM680_RS05280;Dbxref=GenBank:WP_001830113.1;Name=WP_001830113.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457378.1;locus_tag=RM680_RS05280;product=signal recognition particle protein;protein_id=WP_001830113.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	69784	70059	.	+	.	ID=gene-RM680_RS05285;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=RM680_RS05285;old_locus_tag=RM680_05290
NZ_JAVRJI010000005.1	Protein Homology	CDS	69784	70059	.	+	0	ID=cds-WP_002439483.1;Parent=gene-RM680_RS05285;Dbxref=GenBank:WP_002439483.1;Name=WP_002439483.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499745.1;locus_tag=RM680_RS05285;product=30S ribosomal protein S16;protein_id=WP_002439483.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	70186	70689	.	+	.	ID=gene-RM680_RS05290;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=RM680_RS05290;old_locus_tag=RM680_05295
NZ_JAVRJI010000005.1	Protein Homology	CDS	70186	70689	.	+	0	ID=cds-WP_001832559.1;Parent=gene-RM680_RS05290;Dbxref=GenBank:WP_001832559.1;Name=WP_001832559.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499746.1;locus_tag=RM680_RS05290;product=ribosome maturation factor RimM;protein_id=WP_001832559.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	70689	71426	.	+	.	ID=gene-RM680_RS05295;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=RM680_RS05295;old_locus_tag=RM680_05300
NZ_JAVRJI010000005.1	Protein Homology	CDS	70689	71426	.	+	0	ID=cds-WP_311563520.1;Parent=gene-RM680_RS05295;Dbxref=GenBank:WP_311563520.1;Name=WP_311563520.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275960.1;locus_tag=RM680_RS05295;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_311563520.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	71532	71882	.	+	.	ID=gene-RM680_RS05300;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=RM680_RS05300;old_locus_tag=RM680_05305
NZ_JAVRJI010000005.1	Protein Homology	CDS	71532	71882	.	+	0	ID=cds-WP_002436293.1;Parent=gene-RM680_RS05300;Dbxref=GenBank:WP_002436293.1;Name=WP_002436293.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303276.1;locus_tag=RM680_RS05300;product=50S ribosomal protein L19;protein_id=WP_002436293.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	72412	75015	.	-	.	ID=gene-RM680_RS05305;Name=RM680_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05305;old_locus_tag=RM680_05310
NZ_JAVRJI010000005.1	Protein Homology	CDS	72412	75015	.	-	0	ID=cds-WP_020368058.1;Parent=gene-RM680_RS05305;Dbxref=GenBank:WP_020368058.1;Name=WP_020368058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495762.1;locus_tag=RM680_RS05305;product=YfhO family protein;protein_id=WP_020368058.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	75008	77608	.	-	.	ID=gene-RM680_RS05310;Name=RM680_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05310;old_locus_tag=RM680_05315
NZ_JAVRJI010000005.1	Protein Homology	CDS	75008	77608	.	-	0	ID=cds-WP_010959172.1;Parent=gene-RM680_RS05310;Dbxref=GenBank:WP_010959172.1;Name=WP_010959172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486159.1;locus_tag=RM680_RS05310;product=YfhO family protein;protein_id=WP_010959172.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	77937	78800	.	+	.	ID=gene-RM680_RS05315;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=RM680_RS05315;old_locus_tag=RM680_05320
NZ_JAVRJI010000005.1	Protein Homology	CDS	77937	78800	.	+	0	ID=cds-WP_002468554.1;Parent=gene-RM680_RS05315;Dbxref=GenBank:WP_002468554.1;Name=WP_002468554.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829495.1;locus_tag=RM680_RS05315;product=ribosome biogenesis GTPase YlqF;protein_id=WP_002468554.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	78805	79575	.	+	.	ID=gene-RM680_RS05320;Name=RM680_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05320;old_locus_tag=RM680_05325
NZ_JAVRJI010000005.1	Protein Homology	CDS	78805	79575	.	+	0	ID=cds-WP_001829514.1;Parent=gene-RM680_RS05320;Dbxref=GenBank:WP_001829514.1;Name=WP_001829514.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368499.1;locus_tag=RM680_RS05320;product=ribonuclease HII;protein_id=WP_001829514.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	79683	80849	.	+	.	ID=gene-RM680_RS05325;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=RM680_RS05325;old_locus_tag=RM680_05330
NZ_JAVRJI010000005.1	Protein Homology	CDS	79683	80849	.	+	0	ID=cds-WP_002439496.1;Parent=gene-RM680_RS05325;Dbxref=GenBank:WP_002439496.1;Name=WP_002439496.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190114.1;locus_tag=RM680_RS05325;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_002439496.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	80871	81779	.	+	.	ID=gene-RM680_RS05330;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=RM680_RS05330;old_locus_tag=RM680_05335
NZ_JAVRJI010000005.1	Protein Homology	CDS	80871	81779	.	+	0	ID=cds-WP_002446283.1;Parent=gene-RM680_RS05330;Dbxref=GenBank:WP_002446283.1;Name=WP_002446283.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499754.1;locus_tag=RM680_RS05330;product=succinate--CoA ligase subunit alpha;protein_id=WP_002446283.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	82584	83456	.	+	.	ID=gene-RM680_RS05340;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=RM680_RS05340;old_locus_tag=RM680_05345
NZ_JAVRJI010000005.1	Protein Homology	CDS	82584	83456	.	+	0	ID=cds-WP_002484839.1;Parent=gene-RM680_RS05340;Dbxref=GenBank:WP_002484839.1;Name=WP_002484839.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491388.1;locus_tag=RM680_RS05340;product=DNA-processing protein DprA;protein_id=WP_002484839.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	83639	85708	.	+	.	ID=gene-RM680_RS05345;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=RM680_RS05345;old_locus_tag=RM680_05350
NZ_JAVRJI010000005.1	Protein Homology	CDS	83639	85708	.	+	0	ID=cds-WP_001829508.1;Parent=gene-RM680_RS05345;Dbxref=GenBank:WP_001829508.1;Name=WP_001829508.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453083.1;locus_tag=RM680_RS05345;product=type I DNA topoisomerase;protein_id=WP_001829508.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	85733	87040	.	+	.	ID=gene-RM680_RS05350;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=RM680_RS05350;old_locus_tag=RM680_05355
NZ_JAVRJI010000005.1	Protein Homology	CDS	85733	87040	.	+	0	ID=cds-WP_001832560.1;Parent=gene-RM680_RS05350;Dbxref=GenBank:WP_001832560.1;Name=WP_001832560.1;Ontology_term=GO:0008033,GO:0047151,GO:0050660,GO:0005737;gbkey=CDS;gene=trmFO;go_component=cytoplasm|0005737||IEA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C 5%2C10-methylenetetrahydrofolate-dependent|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499759.1;locus_tag=RM680_RS05350;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;protein_id=WP_001832560.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	87295	88155	.	+	.	ID=gene-RM680_RS05355;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=RM680_RS05355;old_locus_tag=RM680_05360
NZ_JAVRJI010000005.1	Protein Homology	CDS	87295	88155	.	+	0	ID=cds-WP_002439503.1;Parent=gene-RM680_RS05355;Dbxref=GenBank:WP_002439503.1;Name=WP_002439503.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638383.1;locus_tag=RM680_RS05355;product=tyrosine recombinase XerC;protein_id=WP_002439503.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	88159	88701	.	+	.	ID=gene-RM680_RS05360;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=RM680_RS05360;old_locus_tag=RM680_05365
NZ_JAVRJI010000005.1	Protein Homology	CDS	88159	88701	.	+	0	ID=cds-WP_001829498.1;Parent=gene-RM680_RS05360;Dbxref=GenBank:WP_001829498.1;Name=WP_001829498.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365078.1;locus_tag=RM680_RS05360;product=ATP-dependent protease subunit HslV;protein_id=WP_001829498.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	88770	90173	.	+	.	ID=gene-RM680_RS05365;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=RM680_RS05365;old_locus_tag=RM680_05370
NZ_JAVRJI010000005.1	Protein Homology	CDS	88770	90173	.	+	0	ID=cds-WP_001829474.1;Parent=gene-RM680_RS05365;Dbxref=GenBank:WP_001829474.1;Name=WP_001829474.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491368.1;locus_tag=RM680_RS05365;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_001829474.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	90197	90970	.	+	.	ID=gene-RM680_RS05370;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=RM680_RS05370;old_locus_tag=RM680_05375
NZ_JAVRJI010000005.1	Protein Homology	CDS	90197	90970	.	+	0	ID=cds-WP_002446289.1;Parent=gene-RM680_RS05370;Dbxref=GenBank:WP_002446289.1;Name=WP_002446289.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499763.1;locus_tag=RM680_RS05370;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WP_002446289.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	91329	92117	.	+	.	ID=gene-RM680_RS05375;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=RM680_RS05375;old_locus_tag=RM680_05380
NZ_JAVRJI010000005.1	Protein Homology	CDS	91329	92117	.	+	0	ID=cds-WP_001832557.1;Parent=gene-RM680_RS05375;Dbxref=GenBank:WP_001832557.1;Name=WP_001832557.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900141.1;locus_tag=RM680_RS05375;product=30S ribosomal protein S2;protein_id=WP_001832557.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	92269	93147	.	+	.	ID=gene-RM680_RS05380;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=RM680_RS05380;old_locus_tag=RM680_05385
NZ_JAVRJI010000005.1	Protein Homology	CDS	92269	93147	.	+	0	ID=cds-WP_002439509.1;Parent=gene-RM680_RS05380;Dbxref=GenBank:WP_002439509.1;Name=WP_002439509.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468450.1;locus_tag=RM680_RS05380;product=translation elongation factor Ts;protein_id=WP_002439509.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	93288	94010	.	+	.	ID=gene-RM680_RS05385;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=RM680_RS05385;old_locus_tag=RM680_05390
NZ_JAVRJI010000005.1	Protein Homology	CDS	93288	94010	.	+	0	ID=cds-WP_002439511.1;Parent=gene-RM680_RS05385;Dbxref=GenBank:WP_002439511.1;Name=WP_002439511.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057332.1;locus_tag=RM680_RS05385;product=UMP kinase;protein_id=WP_002439511.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	94027	94581	.	+	.	ID=gene-RM680_RS05390;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=RM680_RS05390;old_locus_tag=RM680_05395
NZ_JAVRJI010000005.1	Protein Homology	CDS	94027	94581	.	+	0	ID=cds-WP_001829472.1;Parent=gene-RM680_RS05390;Dbxref=GenBank:WP_001829472.1;Name=WP_001829472.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275941.1;locus_tag=RM680_RS05390;product=ribosome recycling factor;protein_id=WP_001829472.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	94802	95572	.	+	.	ID=gene-RM680_RS05395;Name=RM680_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05395;old_locus_tag=RM680_05400
NZ_JAVRJI010000005.1	Protein Homology	CDS	94802	95572	.	+	0	ID=cds-WP_001832561.1;Parent=gene-RM680_RS05395;Dbxref=GenBank:WP_001832561.1;Name=WP_001832561.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499770.1;locus_tag=RM680_RS05395;product=isoprenyl transferase;protein_id=WP_001832561.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	95576	96358	.	+	.	ID=gene-RM680_RS05400;Name=RM680_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05400;old_locus_tag=RM680_05405
NZ_JAVRJI010000005.1	Protein Homology	CDS	95576	96358	.	+	0	ID=cds-WP_001829499.1;Parent=gene-RM680_RS05400;Dbxref=GenBank:WP_001829499.1;Name=WP_001829499.1;Ontology_term=GO:0016024,GO:0004605,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499771.1;locus_tag=RM680_RS05400;product=phosphatidate cytidylyltransferase;protein_id=WP_001829499.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	96592	97878	.	+	.	ID=gene-RM680_RS05405;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=RM680_RS05405;old_locus_tag=RM680_05410
NZ_JAVRJI010000005.1	Protein Homology	CDS	96592	97878	.	+	0	ID=cds-WP_001829501.1;Parent=gene-RM680_RS05405;Dbxref=GenBank:WP_001829501.1;Name=WP_001829501.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121122.1;locus_tag=RM680_RS05405;product=RIP metalloprotease RseP;protein_id=WP_001829501.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	97897	99600	.	+	.	ID=gene-RM680_RS05410;Name=RM680_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05410;old_locus_tag=RM680_05415
NZ_JAVRJI010000005.1	Protein Homology	CDS	97897	99600	.	+	0	ID=cds-WP_001829513.1;Parent=gene-RM680_RS05410;Dbxref=GenBank:WP_001829513.1;Name=WP_001829513.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499773.1;locus_tag=RM680_RS05410;product=proline--tRNA ligase;protein_id=WP_001829513.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	99850	104160	.	+	.	ID=gene-RM680_RS05415;Name=RM680_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05415;old_locus_tag=RM680_05420
NZ_JAVRJI010000005.1	Protein Homology	CDS	99850	104160	.	+	0	ID=cds-WP_002456566.1;Parent=gene-RM680_RS05415;Dbxref=GenBank:WP_002456566.1;Name=WP_002456566.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499774.1;locus_tag=RM680_RS05415;product=PolC-type DNA polymerase III;protein_id=WP_002456566.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	104339	104806	.	+	.	ID=gene-RM680_RS05420;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=RM680_RS05420;old_locus_tag=RM680_05425
NZ_JAVRJI010000005.1	Protein Homology	CDS	104339	104806	.	+	0	ID=cds-WP_002439519.1;Parent=gene-RM680_RS05420;Dbxref=GenBank:WP_002439519.1;Name=WP_002439519.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499775.1;locus_tag=RM680_RS05420;product=ribosome maturation factor RimP;protein_id=WP_002439519.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	104827	106050	.	+	.	ID=gene-RM680_RS05425;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=RM680_RS05425;old_locus_tag=RM680_05430
NZ_JAVRJI010000005.1	Protein Homology	CDS	104827	106050	.	+	0	ID=cds-WP_020368160.1;Parent=gene-RM680_RS05425;Dbxref=GenBank:WP_020368160.1;Name=WP_020368160.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464328.1;locus_tag=RM680_RS05425;product=transcription termination factor NusA;protein_id=WP_020368160.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	106068	106352	.	+	.	ID=gene-RM680_RS05430;Name=rnpM;gbkey=Gene;gene=rnpM;gene_biotype=protein_coding;gene_synonym=ylxR;locus_tag=RM680_RS05430;old_locus_tag=RM680_05435
NZ_JAVRJI010000005.1	Protein Homology	CDS	106068	106352	.	+	0	ID=cds-WP_001829465.1;Parent=gene-RM680_RS05430;Dbxref=GenBank:WP_001829465.1;Name=WP_001829465.1;gbkey=CDS;gene=rnpM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499777.1;locus_tag=RM680_RS05430;product=RNase P modulator RnpM;protein_id=WP_001829465.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	106352	106669	.	+	.	ID=gene-RM680_RS05435;Name=RM680_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05435;old_locus_tag=RM680_05440
NZ_JAVRJI010000005.1	Protein Homology	CDS	106352	106669	.	+	0	ID=cds-WP_002439520.1;Parent=gene-RM680_RS05435;Dbxref=GenBank:WP_002439520.1;Name=WP_002439520.1;Ontology_term=GO:0003723,GO:0003735;gbkey=CDS;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439520.1;locus_tag=RM680_RS05435;product=YlxQ family RNA-binding protein;protein_id=WP_002439520.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	106674	108836	.	+	.	ID=gene-RM680_RS05440;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=RM680_RS05440;old_locus_tag=RM680_05445
NZ_JAVRJI010000005.1	Protein Homology	CDS	106674	108836	.	+	0	ID=cds-WP_002468903.1;Parent=gene-RM680_RS05440;Dbxref=GenBank:WP_002468903.1;Name=WP_002468903.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499779.1;locus_tag=RM680_RS05440;product=translation initiation factor IF-2;protein_id=WP_002468903.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	109139	109489	.	+	.	ID=gene-RM680_RS05445;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=RM680_RS05445;old_locus_tag=RM680_05450
NZ_JAVRJI010000005.1	Protein Homology	CDS	109139	109489	.	+	0	ID=cds-WP_001829509.1;Parent=gene-RM680_RS05445;Dbxref=GenBank:WP_001829509.1;Name=WP_001829509.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499780.1;locus_tag=RM680_RS05445;product=30S ribosome-binding factor RbfA;protein_id=WP_001829509.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	109627	110544	.	+	.	ID=gene-RM680_RS05450;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=RM680_RS05450;old_locus_tag=RM680_05455
NZ_JAVRJI010000005.1	Protein Homology	CDS	109627	110544	.	+	0	ID=cds-WP_002456563.1;Parent=gene-RM680_RS05450;Dbxref=GenBank:WP_002456563.1;Name=WP_002456563.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464330.1;locus_tag=RM680_RS05450;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_002456563.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	110560	111531	.	+	.	ID=gene-RM680_RS05455;Name=RM680_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05455;old_locus_tag=RM680_05460
NZ_JAVRJI010000005.1	Protein Homology	CDS	110560	111531	.	+	0	ID=cds-WP_001832563.1;Parent=gene-RM680_RS05455;Dbxref=GenBank:WP_001832563.1;Name=WP_001832563.1;Ontology_term=GO:0003919;gbkey=CDS;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499782.1;locus_tag=RM680_RS05455;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_001832563.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	111651	111920	.	+	.	ID=gene-RM680_RS05460;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=RM680_RS05460;old_locus_tag=RM680_05465
NZ_JAVRJI010000005.1	Protein Homology	CDS	111651	111920	.	+	0	ID=cds-WP_002439528.1;Parent=gene-RM680_RS05460;Dbxref=GenBank:WP_002439528.1;Name=WP_002439528.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=RM680_RS05460;product=30S ribosomal protein S15;protein_id=WP_002439528.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	112052	114157	.	+	.	ID=gene-RM680_RS05465;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=RM680_RS05465;old_locus_tag=RM680_05470
NZ_JAVRJI010000005.1	Protein Homology	CDS	112052	114157	.	+	0	ID=cds-WP_311563521.1;Parent=gene-RM680_RS05465;Dbxref=GenBank:WP_311563521.1;Name=WP_311563521.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494421.1;locus_tag=RM680_RS05465;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_311563521.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	114525	116198	.	+	.	ID=gene-RM680_RS05470;Name=rnjB;gbkey=Gene;gene=rnjB;gene_biotype=protein_coding;locus_tag=RM680_RS05470;old_locus_tag=RM680_05475
NZ_JAVRJI010000005.1	Protein Homology	CDS	114525	116198	.	+	0	ID=cds-WP_002457357.1;Parent=gene-RM680_RS05470;Dbxref=GenBank:WP_002457357.1;Name=WP_002457357.1;gbkey=CDS;gene=rnjB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455407.1;locus_tag=RM680_RS05470;product=ribonuclease J2;protein_id=WP_002457357.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	116464	118857	.	+	.	ID=gene-RM680_RS05475;Name=RM680_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05475;old_locus_tag=RM680_05480
NZ_JAVRJI010000005.1	Protein Homology	CDS	116464	118857	.	+	0	ID=cds-WP_002439534.1;Parent=gene-RM680_RS05475;Dbxref=GenBank:WP_002439534.1;Name=WP_002439534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498353.1;locus_tag=RM680_RS05475;product=DNA translocase FtsK;protein_id=WP_002439534.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	118860	119573	.	+	.	ID=gene-RM680_RS05480;Name=RM680_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05480;old_locus_tag=RM680_05485
NZ_JAVRJI010000005.1	Protein Homology	CDS	118860	119573	.	+	0	ID=cds-WP_002439536.1;Parent=gene-RM680_RS05480;Dbxref=GenBank:WP_002439536.1;Name=WP_002439536.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012101842.1;locus_tag=RM680_RS05480;product=GntR family transcriptional regulator;protein_id=WP_002439536.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	119604	120875	.	+	.	ID=gene-RM680_RS05485;Name=yfmF;gbkey=Gene;gene=yfmF;gene_biotype=protein_coding;locus_tag=RM680_RS05485;old_locus_tag=RM680_05490
NZ_JAVRJI010000005.1	Protein Homology	CDS	119604	120875	.	+	0	ID=cds-WP_002439538.1;Parent=gene-RM680_RS05485;Dbxref=GenBank:WP_002439538.1;Name=WP_002439538.1;gbkey=CDS;gene=yfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470250.1;locus_tag=RM680_RS05485;product=EF-P 5-aminopentanol modification-associated protein YfmF;protein_id=WP_002439538.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	120875	122164	.	+	.	ID=gene-RM680_RS05490;Name=yfmH;gbkey=Gene;gene=yfmH;gene_biotype=protein_coding;locus_tag=RM680_RS05490;old_locus_tag=RM680_05495
NZ_JAVRJI010000005.1	Protein Homology	CDS	120875	122164	.	+	0	ID=cds-WP_001832569.1;Parent=gene-RM680_RS05490;Dbxref=GenBank:WP_001832569.1;Name=WP_001832569.1;gbkey=CDS;gene=yfmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113623.1;locus_tag=RM680_RS05490;product=EF-P 5-aminopentanol modification-associated protein YfmH;protein_id=WP_001832569.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	122161	122865	.	+	.	ID=gene-RM680_RS05495;Name=ymfI;gbkey=Gene;gene=ymfI;gene_biotype=protein_coding;locus_tag=RM680_RS05495;old_locus_tag=RM680_05500
NZ_JAVRJI010000005.1	Protein Homology	CDS	122161	122865	.	+	0	ID=cds-WP_002439542.1;Parent=gene-RM680_RS05495;Dbxref=GenBank:WP_002439542.1;Name=WP_002439542.1;gbkey=CDS;gene=ymfI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439542.1;locus_tag=RM680_RS05495;product=elongation factor P 5-aminopentanone reductase;protein_id=WP_002439542.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	123018	123845	.	+	.	ID=gene-RM680_RS05500;Name=RM680_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05500;old_locus_tag=RM680_05505
NZ_JAVRJI010000005.1	Protein Homology	CDS	123018	123845	.	+	0	ID=cds-WP_002456562.1;Parent=gene-RM680_RS05500;Dbxref=GenBank:WP_002456562.1;Name=WP_002456562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499791.1;locus_tag=RM680_RS05500;product=YmfK family protein;protein_id=WP_002456562.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	123864	124256	.	+	.	ID=gene-RM680_RS05505;Name=RM680_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05505;old_locus_tag=RM680_05510
NZ_JAVRJI010000005.1	Protein Homology	CDS	123864	124256	.	+	0	ID=cds-WP_001832565.1;Parent=gene-RM680_RS05505;Dbxref=GenBank:WP_001832565.1;Name=WP_001832565.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832565.1;locus_tag=RM680_RS05505;product=helix-turn-helix domain-containing protein;protein_id=WP_001832565.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	124285	124866	.	+	.	ID=gene-RM680_RS05510;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=RM680_RS05510;old_locus_tag=RM680_05515
NZ_JAVRJI010000005.1	Protein Homology	CDS	124285	124866	.	+	0	ID=cds-WP_001829485.1;Parent=gene-RM680_RS05510;Dbxref=GenBank:WP_001829485.1;Name=WP_001829485.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439546.1;locus_tag=RM680_RS05510;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_001829485.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	125314	126459	.	+	.	ID=gene-RM680_RS05515;Name=RM680_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05515;old_locus_tag=RM680_05520
NZ_JAVRJI010000005.1	Protein Homology	CDS	125314	126459	.	+	0	ID=cds-WP_001829470.1;Parent=gene-RM680_RS05515;Dbxref=GenBank:WP_001829470.1;Name=WP_001829470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476666.1;locus_tag=RM680_RS05515;product=CinA family nicotinamide mononucleotide deamidase-related protein;protein_id=WP_001829470.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	126630	127679	.	+	.	ID=gene-RM680_RS05520;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=RM680_RS05520;old_locus_tag=RM680_05525
NZ_JAVRJI010000005.1	Protein Homology	CDS	126630	127679	.	+	0	ID=cds-WP_002439552.1;Parent=gene-RM680_RS05520;Dbxref=GenBank:WP_002439552.1;Name=WP_002439552.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361431.1;locus_tag=RM680_RS05520;product=recombinase RecA;protein_id=WP_002439552.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	127905	129464	.	+	.	ID=gene-RM680_RS05525;Name=rny;gbkey=Gene;gene=rny;gene_biotype=protein_coding;locus_tag=RM680_RS05525;old_locus_tag=RM680_05530
NZ_JAVRJI010000005.1	Protein Homology	CDS	127905	129464	.	+	0	ID=cds-WP_001829512.1;Parent=gene-RM680_RS05525;Dbxref=GenBank:WP_001829512.1;Name=WP_001829512.1;Ontology_term=GO:0006402,GO:0003723,GO:0016020;gbkey=CDS;gene=rny;go_component=membrane|0016020||IEA;go_function=RNA binding|0003723||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459258.1;locus_tag=RM680_RS05525;product=ribonuclease Y;protein_id=WP_001829512.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	129553	129768	.	-	.	ID=gene-RM680_RS05530;Name=RM680_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05530;old_locus_tag=RM680_05535
NZ_JAVRJI010000005.1	Protein Homology	CDS	129553	129768	.	-	0	ID=cds-WP_002439555.1;Parent=gene-RM680_RS05530;Dbxref=GenBank:WP_002439555.1;Name=WP_002439555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499797.1;locus_tag=RM680_RS05530;product=hypothetical protein;protein_id=WP_002439555.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	129932	130726	.	+	.	ID=gene-RM680_RS05535;Name=RM680_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05535;old_locus_tag=RM680_05540
NZ_JAVRJI010000005.1	Protein Homology	CDS	129932	130726	.	+	0	ID=cds-WP_001832548.1;Parent=gene-RM680_RS05535;Dbxref=GenBank:WP_001832548.1;Name=WP_001832548.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439557.1;locus_tag=RM680_RS05535;product=TIGR00282 family metallophosphoesterase;protein_id=WP_001832548.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	130839	132599	.	+	.	ID=gene-RM680_RS05540;Name=RM680_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05540;old_locus_tag=RM680_05545
NZ_JAVRJI010000005.1	Protein Homology	CDS	130839	132599	.	+	0	ID=cds-WP_002469373.1;Parent=gene-RM680_RS05540;Dbxref=GenBank:WP_002469373.1;Name=WP_002469373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499799.1;locus_tag=RM680_RS05540;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WP_002469373.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	132600	133466	.	+	.	ID=gene-RM680_RS05545;Name=RM680_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05545;old_locus_tag=RM680_05550
NZ_JAVRJI010000005.1	Protein Homology	CDS	132600	133466	.	+	0	ID=cds-WP_002439562.1;Parent=gene-RM680_RS05545;Dbxref=GenBank:WP_002439562.1;Name=WP_002439562.1;Ontology_term=GO:0030976,GO:0046872;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499800.1;locus_tag=RM680_RS05545;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WP_002439562.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	134052	134669	.	+	.	ID=gene-RM680_RS05550;Name=RM680_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05550;old_locus_tag=RM680_05555
NZ_JAVRJI010000005.1	Protein Homology	CDS	134052	134669	.	+	0	ID=cds-WP_001832558.1;Parent=gene-RM680_RS05550;Dbxref=GenBank:WP_001832558.1;Name=WP_001832558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832558.1;locus_tag=RM680_RS05550;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_001832558.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	134726	135016	.	+	.	ID=gene-RM680_RS05555;Name=RM680_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05555;old_locus_tag=RM680_05560
NZ_JAVRJI010000005.1	Protein Homology	CDS	134726	135016	.	+	0	ID=cds-WP_001829496.1;Parent=gene-RM680_RS05555;Dbxref=GenBank:WP_001829496.1;Name=WP_001829496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829496.1;locus_tag=RM680_RS05555;product=thiamine-binding protein;protein_id=WP_001829496.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	135359	136903	.	+	.	ID=gene-RM680_RS05560;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=RM680_RS05560;old_locus_tag=RM680_05565
NZ_JAVRJI010000005.1	Protein Homology	CDS	135359	136903	.	+	0	ID=cds-WP_002439565.1;Parent=gene-RM680_RS05560;Dbxref=GenBank:WP_002439565.1;Name=WP_002439565.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499802.1;locus_tag=RM680_RS05560;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_002439565.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	136905	137270	.	+	.	ID=gene-RM680_RS05565;Name=RM680_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05565;old_locus_tag=RM680_05570
NZ_JAVRJI010000005.1	Protein Homology	CDS	136905	137270	.	+	0	ID=cds-WP_001829463.1;Parent=gene-RM680_RS05565;Dbxref=GenBank:WP_001829463.1;Name=WP_001829463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113794.1;locus_tag=RM680_RS05565;product=RicAFT regulatory complex protein RicA family protein;protein_id=WP_001829463.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	137294	137788	.	+	.	ID=gene-RM680_RS05570;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=RM680_RS05570;old_locus_tag=RM680_05575
NZ_JAVRJI010000005.1	Protein Homology	CDS	137294	137788	.	+	0	ID=cds-WP_001829480.1;Parent=gene-RM680_RS05570;Dbxref=GenBank:WP_001829480.1;Name=WP_001829480.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829480.1;locus_tag=RM680_RS05570;product=energy coupling factor transporter S component ThiW;protein_id=WP_001829480.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	137986	140607	.	+	.	ID=gene-RM680_RS05575;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=RM680_RS05575;old_locus_tag=RM680_05580
NZ_JAVRJI010000005.1	Protein Homology	CDS	137986	140607	.	+	0	ID=cds-WP_020368423.1;Parent=gene-RM680_RS05575;Dbxref=GenBank:WP_020368423.1;Name=WP_020368423.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368423.1;locus_tag=RM680_RS05575;product=DNA mismatch repair protein MutS;protein_id=WP_020368423.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	140622	142559	.	+	.	ID=gene-RM680_RS05580;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=RM680_RS05580;old_locus_tag=RM680_05585
NZ_JAVRJI010000005.1	Protein Homology	CDS	140622	142559	.	+	0	ID=cds-WP_020368422.1;Parent=gene-RM680_RS05580;Dbxref=GenBank:WP_020368422.1;Name=WP_020368422.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439573.1;locus_tag=RM680_RS05580;product=DNA mismatch repair endonuclease MutL;protein_id=WP_020368422.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	142573	143106	.	+	.	ID=gene-RM680_RS05585;Name=RM680_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05585;old_locus_tag=RM680_05590
NZ_JAVRJI010000005.1	Protein Homology	CDS	142573	143106	.	+	0	ID=cds-WP_002439577.1;Parent=gene-RM680_RS05585;Dbxref=GenBank:WP_002439577.1;Name=WP_002439577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473712.1;locus_tag=RM680_RS05585;product=glycerol-3-phosphate responsive antiterminator;protein_id=WP_002439577.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	143481	144305	.	+	.	ID=gene-RM680_RS05590;Name=RM680_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05590;old_locus_tag=RM680_05595
NZ_JAVRJI010000005.1	Protein Homology	CDS	143481	144305	.	+	0	ID=cds-WP_001829504.1;Parent=gene-RM680_RS05590;Dbxref=GenBank:WP_001829504.1;Name=WP_001829504.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499808.1;locus_tag=RM680_RS05590;product=MIP/aquaporin family protein;protein_id=WP_001829504.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	144459	145958	.	+	.	ID=gene-RM680_RS05595;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=RM680_RS05595;old_locus_tag=RM680_05600
NZ_JAVRJI010000005.1	Protein Homology	CDS	144459	145958	.	+	0	ID=cds-WP_020368070.1;Parent=gene-RM680_RS05595;Dbxref=GenBank:WP_020368070.1;Name=WP_020368070.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638335.1;locus_tag=RM680_RS05595;product=glycerol kinase GlpK;protein_id=WP_020368070.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	146135	147808	.	+	.	ID=gene-RM680_RS05600;Name=RM680_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05600;old_locus_tag=RM680_05605
NZ_JAVRJI010000005.1	Protein Homology	CDS	146135	147808	.	+	0	ID=cds-WP_002439581.1;Parent=gene-RM680_RS05600;Dbxref=GenBank:WP_002439581.1;Name=WP_002439581.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446326.1;locus_tag=RM680_RS05600;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_002439581.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	148032	148958	.	+	.	ID=gene-RM680_RS05605;Name=RM680_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05605;old_locus_tag=RM680_05610
NZ_JAVRJI010000005.1	Protein Homology	CDS	148032	148958	.	+	0	ID=cds-WP_002468019.1;Parent=gene-RM680_RS05605;Dbxref=GenBank:WP_002468019.1;Name=WP_002468019.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487400.1;locus_tag=RM680_RS05605;product=alpha/beta hydrolase;protein_id=WP_002468019.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	148970	149968	.	+	.	ID=gene-RM680_RS05610;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=RM680_RS05610;old_locus_tag=RM680_05615
NZ_JAVRJI010000005.1	Protein Homology	CDS	148970	149968	.	+	0	ID=cds-WP_002439583.1;Parent=gene-RM680_RS05610;Dbxref=GenBank:WP_002439583.1;Name=WP_002439583.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473768.1;locus_tag=RM680_RS05610;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_002439583.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	149922	150161	.	+	.	ID=gene-RM680_RS05615;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=RM680_RS05615;old_locus_tag=RM680_05620
NZ_JAVRJI010000005.1	Protein Homology	CDS	149922	150161	.	+	0	ID=cds-WP_001829517.1;Parent=gene-RM680_RS05615;Dbxref=GenBank:WP_001829517.1;Name=WP_001829517.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499813.1;locus_tag=RM680_RS05615;product=RNA chaperone Hfq;protein_id=WP_001829517.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	150383	150859	.	-	.	ID=gene-RM680_RS05620;Name=RM680_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05620;old_locus_tag=RM680_05625
NZ_JAVRJI010000005.1	Protein Homology	CDS	150383	150859	.	-	0	ID=cds-WP_002456556.1;Parent=gene-RM680_RS05620;Dbxref=GenBank:WP_002456556.1;Name=WP_002456556.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499814.1;locus_tag=RM680_RS05620;product=glutathione peroxidase;protein_id=WP_002456556.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	150960	152210	.	+	.	ID=gene-RM680_RS05625;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=RM680_RS05625;old_locus_tag=RM680_05630
NZ_JAVRJI010000005.1	Protein Homology	CDS	150960	152210	.	+	0	ID=cds-WP_023567250.1;Parent=gene-RM680_RS05625;Dbxref=GenBank:WP_023567250.1;Name=WP_023567250.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368205.1;locus_tag=RM680_RS05625;product=GTPase HflX;protein_id=WP_023567250.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	152226	153464	.	+	.	ID=gene-RM680_RS05630;Name=RM680_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05630;old_locus_tag=RM680_05635
NZ_JAVRJI010000005.1	Protein Homology	CDS	152226	153464	.	+	0	ID=cds-WP_002456554.1;Parent=gene-RM680_RS05630;Dbxref=GenBank:WP_002456554.1;Name=WP_002456554.1;Ontology_term=GO:0000096,GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=sulfur amino acid metabolic process|0000096||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446331.1;locus_tag=RM680_RS05630;product=methionine gamma-lyase family protein;protein_id=WP_002456554.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	153945	154310	.	+	.	ID=gene-RM680_RS05635;Name=RM680_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05635;old_locus_tag=RM680_05640
NZ_JAVRJI010000005.1	Protein Homology	CDS	153945	154310	.	+	0	ID=cds-WP_001829488.1;Parent=gene-RM680_RS05635;Dbxref=GenBank:WP_001829488.1;Name=WP_001829488.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463893.1;locus_tag=RM680_RS05635;product=MerR family transcriptional regulator;protein_id=WP_001829488.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	154329	155669	.	+	.	ID=gene-RM680_RS05640;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=RM680_RS05640;old_locus_tag=RM680_05645
NZ_JAVRJI010000005.1	Protein Homology	CDS	154329	155669	.	+	0	ID=cds-WP_217859037.1;Parent=gene-RM680_RS05640;Dbxref=GenBank:WP_217859037.1;Name=WP_217859037.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499818.1;locus_tag=RM680_RS05640;product=type I glutamate--ammonia ligase;protein_id=WP_217859037.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	155814	156938	.	-	.	ID=gene-RM680_RS05645;Name=RM680_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05645;old_locus_tag=RM680_05650
NZ_JAVRJI010000005.1	Protein Homology	CDS	155814	156938	.	-	0	ID=cds-WP_002457334.1;Parent=gene-RM680_RS05645;Dbxref=GenBank:WP_002457334.1;Name=WP_002457334.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493725.1;locus_tag=RM680_RS05645;product=site-specific integrase;protein_id=WP_002457334.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	156981	157352	.	-	.	ID=gene-RM680_RS05650;Name=RM680_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05650;old_locus_tag=RM680_05655
NZ_JAVRJI010000005.1	Protein Homology	CDS	156981	157352	.	-	0	ID=cds-WP_002457333.1;Parent=gene-RM680_RS05650;Dbxref=GenBank:WP_002457333.1;Name=WP_002457333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457333.1;locus_tag=RM680_RS05650;product=hypothetical protein;protein_id=WP_002457333.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	157522	157872	.	-	.	ID=gene-RM680_RS05655;Name=RM680_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05655;old_locus_tag=RM680_05660
NZ_JAVRJI010000005.1	Protein Homology	CDS	157522	157872	.	-	0	ID=cds-WP_002457332.1;Parent=gene-RM680_RS05655;Dbxref=GenBank:WP_002457332.1;Name=WP_002457332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493723.1;locus_tag=RM680_RS05655;product=helix-turn-helix domain-containing protein;protein_id=WP_002457332.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	158037	158273	.	+	.	ID=gene-RM680_RS05660;Name=RM680_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05660;old_locus_tag=RM680_05665
NZ_JAVRJI010000005.1	Protein Homology	CDS	158037	158273	.	+	0	ID=cds-WP_002457331.1;Parent=gene-RM680_RS05660;Dbxref=GenBank:WP_002457331.1;Name=WP_002457331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457331.1;locus_tag=RM680_RS05660;product=helix-turn-helix domain-containing protein;protein_id=WP_002457331.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	158301	158579	.	+	.	ID=gene-RM680_RS05665;Name=RM680_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05665;old_locus_tag=RM680_05670
NZ_JAVRJI010000005.1	Protein Homology	CDS	158301	158579	.	+	0	ID=cds-WP_002457330.1;Parent=gene-RM680_RS05665;Dbxref=GenBank:WP_002457330.1;Name=WP_002457330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457330.1;locus_tag=RM680_RS05665;product=hypothetical protein;protein_id=WP_002457330.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	158601	158756	.	+	.	ID=gene-RM680_RS05670;Name=RM680_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05670;old_locus_tag=RM680_05675
NZ_JAVRJI010000005.1	Protein Homology	CDS	158601	158756	.	+	0	ID=cds-WP_002457329.1;Parent=gene-RM680_RS05670;Dbxref=GenBank:WP_002457329.1;Name=WP_002457329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457329.1;locus_tag=RM680_RS05670;product=hypothetical protein;protein_id=WP_002457329.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	158756	158920	.	+	.	ID=gene-RM680_RS05675;Name=RM680_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05675;old_locus_tag=RM680_05680
NZ_JAVRJI010000005.1	Protein Homology	CDS	158756	158920	.	+	0	ID=cds-WP_002457328.1;Parent=gene-RM680_RS05675;Dbxref=GenBank:WP_002457328.1;Name=WP_002457328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457328.1;locus_tag=RM680_RS05675;product=hypothetical protein;protein_id=WP_002457328.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	158909	159112	.	-	.	ID=gene-RM680_RS05680;Name=RM680_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05680;old_locus_tag=RM680_05685
NZ_JAVRJI010000005.1	Protein Homology	CDS	158909	159112	.	-	0	ID=cds-WP_002457327.1;Parent=gene-RM680_RS05680;Dbxref=GenBank:WP_002457327.1;Name=WP_002457327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457327.1;locus_tag=RM680_RS05680;product=hypothetical protein;protein_id=WP_002457327.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	159178	159387	.	+	.	ID=gene-RM680_RS05685;Name=RM680_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05685;old_locus_tag=RM680_05690
NZ_JAVRJI010000005.1	Protein Homology	CDS	159178	159387	.	+	0	ID=cds-WP_002457326.1;Parent=gene-RM680_RS05685;Dbxref=GenBank:WP_002457326.1;Name=WP_002457326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457326.1;locus_tag=RM680_RS05685;product=hypothetical protein;protein_id=WP_002457326.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	159402	159593	.	+	.	ID=gene-RM680_RS05690;Name=RM680_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05690;old_locus_tag=RM680_05695
NZ_JAVRJI010000005.1	Protein Homology	CDS	159402	159593	.	+	0	ID=cds-WP_002457325.1;Parent=gene-RM680_RS05690;Dbxref=GenBank:WP_002457325.1;Name=WP_002457325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457325.1;locus_tag=RM680_RS05690;product=DUF1270 family protein;protein_id=WP_002457325.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	159656	159922	.	+	.	ID=gene-RM680_RS05695;Name=RM680_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05695;old_locus_tag=RM680_05700
NZ_JAVRJI010000005.1	Protein Homology	CDS	159656	159922	.	+	0	ID=cds-WP_002457324.1;Parent=gene-RM680_RS05695;Dbxref=GenBank:WP_002457324.1;Name=WP_002457324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457324.1;locus_tag=RM680_RS05695;product=hypothetical protein;protein_id=WP_002457324.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	159936	160331	.	+	.	ID=gene-RM680_RS05700;Name=RM680_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05700;old_locus_tag=RM680_05705
NZ_JAVRJI010000005.1	Protein Homology	CDS	159936	160331	.	+	0	ID=cds-WP_002457323.1;Parent=gene-RM680_RS05700;Dbxref=GenBank:WP_002457323.1;Name=WP_002457323.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457323.1;locus_tag=RM680_RS05700;product=single-stranded DNA-binding protein;protein_id=WP_002457323.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	160361	161263	.	+	.	ID=gene-RM680_RS05705;Name=RM680_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05705;old_locus_tag=RM680_05710
NZ_JAVRJI010000005.1	Protein Homology	CDS	160361	161263	.	+	0	ID=cds-WP_002457322.1;Parent=gene-RM680_RS05705;Dbxref=GenBank:WP_002457322.1;Name=WP_002457322.1;Ontology_term=GO:0006269;gbkey=CDS;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457322.1;locus_tag=RM680_RS05705;product=DnaD domain protein;protein_id=WP_002457322.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	161269	161616	.	+	.	ID=gene-RM680_RS05710;Name=RM680_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05710;old_locus_tag=RM680_05715
NZ_JAVRJI010000005.1	Protein Homology	CDS	161269	161616	.	+	0	ID=cds-WP_002504544.1;Parent=gene-RM680_RS05710;Dbxref=GenBank:WP_002504544.1;Name=WP_002504544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504544.1;locus_tag=RM680_RS05710;product=SA1788 family PVL leukocidin-associated protein;protein_id=WP_002504544.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	161667	161966	.	+	.	ID=gene-RM680_RS05715;Name=RM680_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05715;old_locus_tag=RM680_05720
NZ_JAVRJI010000005.1	Protein Homology	CDS	161667	161966	.	+	0	ID=cds-WP_002457320.1;Parent=gene-RM680_RS05715;Dbxref=GenBank:WP_002457320.1;Name=WP_002457320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457320.1;locus_tag=RM680_RS05715;product=hypothetical protein;protein_id=WP_002457320.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	pseudogene	162309	162517	.	+	.	ID=gene-RM680_RS05720;Name=RM680_RS05720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS05720;old_locus_tag=RM680_05725;partial=true;pseudo=true;start_range=.,162309
NZ_JAVRJI010000005.1	Protein Homology	CDS	162309	162517	.	+	0	ID=cds-RM680_RS05720;Parent=gene-RM680_RS05720;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165890.1;locus_tag=RM680_RS05720;partial=true;product=MazG-like family protein;pseudo=true;start_range=.,162309;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	162637	162861	.	-	.	ID=gene-RM680_RS05725;Name=RM680_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05725;old_locus_tag=RM680_05730
NZ_JAVRJI010000005.1	Protein Homology	CDS	162637	162861	.	-	0	ID=cds-WP_002457319.1;Parent=gene-RM680_RS05725;Dbxref=GenBank:WP_002457319.1;Name=WP_002457319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457319.1;locus_tag=RM680_RS05725;product=hypothetical protein;protein_id=WP_002457319.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	163036	163536	.	+	.	ID=gene-RM680_RS05730;Name=RM680_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05730;old_locus_tag=RM680_05735
NZ_JAVRJI010000005.1	Protein Homology	CDS	163036	163536	.	+	0	ID=cds-WP_002484781.1;Parent=gene-RM680_RS05730;Dbxref=GenBank:WP_002484781.1;Name=WP_002484781.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484781.1;locus_tag=RM680_RS05730;product=sigma factor-like helix-turn-helix DNA-binding protein;protein_id=WP_002484781.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	163564	164406	.	+	.	ID=gene-RM680_RS05735;Name=RM680_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05735;old_locus_tag=RM680_05740
NZ_JAVRJI010000005.1	Protein Homology	CDS	163564	164406	.	+	0	ID=cds-WP_002458440.1;Parent=gene-RM680_RS05735;Dbxref=GenBank:WP_002458440.1;Name=WP_002458440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458440.1;locus_tag=RM680_RS05735;product=hypothetical protein;protein_id=WP_002458440.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	164461	164817	.	+	.	ID=gene-RM680_RS05740;Name=RM680_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05740;old_locus_tag=RM680_05745
NZ_JAVRJI010000005.1	Protein Homology	CDS	164461	164817	.	+	0	ID=cds-WP_002458439.1;Parent=gene-RM680_RS05740;Dbxref=GenBank:WP_002458439.1;Name=WP_002458439.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458439.1;locus_tag=RM680_RS05740;product=HNH endonuclease;protein_id=WP_002458439.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	164938	165339	.	+	.	ID=gene-RM680_RS05745;Name=RM680_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05745;old_locus_tag=RM680_05750
NZ_JAVRJI010000005.1	Protein Homology	CDS	164938	165339	.	+	0	ID=cds-WP_002458438.1;Parent=gene-RM680_RS05745;Dbxref=GenBank:WP_002458438.1;Name=WP_002458438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458438.1;locus_tag=RM680_RS05745;product=hypothetical protein;protein_id=WP_002458438.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	165332	167047	.	+	.	ID=gene-RM680_RS05750;Name=RM680_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05750;old_locus_tag=RM680_05755
NZ_JAVRJI010000005.1	Protein Homology	CDS	165332	167047	.	+	0	ID=cds-WP_002458437.1;Parent=gene-RM680_RS05750;Dbxref=GenBank:WP_002458437.1;Name=WP_002458437.1;Ontology_term=GO:0004519,GO:0005524,GO:0140657;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458437.1;locus_tag=RM680_RS05750;product=terminase large subunit;protein_id=WP_002458437.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	167062	168288	.	+	.	ID=gene-RM680_RS05755;Name=RM680_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05755;old_locus_tag=RM680_05760
NZ_JAVRJI010000005.1	Protein Homology	CDS	167062	168288	.	+	0	ID=cds-WP_002458436.1;Parent=gene-RM680_RS05755;Dbxref=GenBank:WP_002458436.1;Name=WP_002458436.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458436.1;locus_tag=RM680_RS05755;product=phage portal protein;protein_id=WP_002458436.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	168278	168922	.	+	.	ID=gene-RM680_RS05760;Name=RM680_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05760;old_locus_tag=RM680_05765
NZ_JAVRJI010000005.1	Protein Homology	CDS	168278	168922	.	+	0	ID=cds-WP_002484782.1;Parent=gene-RM680_RS05760;Dbxref=GenBank:WP_002484782.1;Name=WP_002484782.1;Ontology_term=GO:0019068,GO:0019082,GO:0005198,GO:0008233;gbkey=CDS;go_function=structural molecule activity|0005198||IEA,peptidase activity|0008233||IEA;go_process=virion assembly|0019068||IEA,viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484782.1;locus_tag=RM680_RS05760;product=HK97 family phage prohead protease;protein_id=WP_002484782.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	168915	170165	.	+	.	ID=gene-RM680_RS05765;Name=RM680_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05765;old_locus_tag=RM680_05770
NZ_JAVRJI010000005.1	Protein Homology	CDS	168915	170165	.	+	0	ID=cds-WP_002458435.1;Parent=gene-RM680_RS05765;Dbxref=GenBank:WP_002458435.1;Name=WP_002458435.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458435.1;locus_tag=RM680_RS05765;product=phage major capsid protein;protein_id=WP_002458435.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	170179	170466	.	+	.	ID=gene-RM680_RS05770;Name=RM680_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05770;old_locus_tag=RM680_05775
NZ_JAVRJI010000005.1	Protein Homology	CDS	170179	170466	.	+	0	ID=cds-WP_002458434.1;Parent=gene-RM680_RS05770;Dbxref=GenBank:WP_002458434.1;Name=WP_002458434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458434.1;locus_tag=RM680_RS05770;product=hypothetical protein;protein_id=WP_002458434.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	170476	170814	.	+	.	ID=gene-RM680_RS05775;Name=RM680_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05775;old_locus_tag=RM680_05780
NZ_JAVRJI010000005.1	Protein Homology	CDS	170476	170814	.	+	0	ID=cds-WP_002458433.1;Parent=gene-RM680_RS05775;Dbxref=GenBank:WP_002458433.1;Name=WP_002458433.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458433.1;locus_tag=RM680_RS05775;product=head-tail connector protein;protein_id=WP_002458433.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	170867	171163	.	+	.	ID=gene-RM680_RS05780;Name=RM680_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05780;old_locus_tag=RM680_05785
NZ_JAVRJI010000005.1	Protein Homology	CDS	170867	171163	.	+	0	ID=cds-WP_002458432.1;Parent=gene-RM680_RS05780;Dbxref=GenBank:WP_002458432.1;Name=WP_002458432.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012084000.1;locus_tag=RM680_RS05780;product=phage head closure protein;protein_id=WP_002458432.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	171163	171576	.	+	.	ID=gene-RM680_RS05785;Name=RM680_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05785;old_locus_tag=RM680_05790
NZ_JAVRJI010000005.1	Protein Homology	CDS	171163	171576	.	+	0	ID=cds-WP_002484776.1;Parent=gene-RM680_RS05785;Dbxref=GenBank:WP_002484776.1;Name=WP_002484776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484776.1;locus_tag=RM680_RS05785;product=hypothetical protein;protein_id=WP_002484776.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	171573	171962	.	+	.	ID=gene-RM680_RS05790;Name=RM680_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05790;old_locus_tag=RM680_05795
NZ_JAVRJI010000005.1	Protein Homology	CDS	171573	171962	.	+	0	ID=cds-WP_002484779.1;Parent=gene-RM680_RS05790;Dbxref=GenBank:WP_002484779.1;Name=WP_002484779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484779.1;locus_tag=RM680_RS05790;product=hypothetical protein;protein_id=WP_002484779.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	171974	172633	.	+	.	ID=gene-RM680_RS05795;Name=RM680_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05795;old_locus_tag=RM680_05800
NZ_JAVRJI010000005.1	Protein Homology	CDS	171974	172633	.	+	0	ID=cds-WP_002458430.1;Parent=gene-RM680_RS05795;Dbxref=GenBank:WP_002458430.1;Name=WP_002458430.1;Ontology_term=GO:0019068,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458430.1;locus_tag=RM680_RS05795;product=major tail protein;protein_id=WP_002458430.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	172657	173007	.	+	.	ID=gene-RM680_RS05800;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=RM680_RS05800;old_locus_tag=RM680_05805
NZ_JAVRJI010000005.1	Protein Homology	CDS	172657	173007	.	+	0	ID=cds-WP_002484788.1;Parent=gene-RM680_RS05800;Dbxref=GenBank:WP_002484788.1;Name=WP_002484788.1;gbkey=CDS;gene=gpG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458429.1;locus_tag=RM680_RS05800;product=phage tail assembly chaperone G;protein_id=WP_002484788.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	173180	173731	.	+	.	ID=gene-RM680_RS05805;Name=RM680_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05805;old_locus_tag=RM680_05810
NZ_JAVRJI010000005.1	GeneMarkS-2+	CDS	173180	173731	.	+	0	ID=cds-WP_311563522.1;Parent=gene-RM680_RS05805;Dbxref=GenBank:WP_311563522.1;Name=WP_311563522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS05805;product=hypothetical protein;protein_id=WP_311563522.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	173834	177670	.	+	.	ID=gene-RM680_RS05810;Name=RM680_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05810;old_locus_tag=RM680_05815
NZ_JAVRJI010000005.1	Protein Homology	CDS	173834	177670	.	+	0	ID=cds-WP_311563523.1;Parent=gene-RM680_RS05810;Dbxref=GenBank:WP_311563523.1;Name=WP_311563523.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:TIGR01760.1;locus_tag=RM680_RS05810;product=phage tail tape measure protein;protein_id=WP_311563523.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	177672	178496	.	+	.	ID=gene-RM680_RS05815;Name=RM680_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05815;old_locus_tag=RM680_05820
NZ_JAVRJI010000005.1	Protein Homology	CDS	177672	178496	.	+	0	ID=cds-WP_311563524.1;Parent=gene-RM680_RS05815;Dbxref=GenBank:WP_311563524.1;Name=WP_311563524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458426.1;locus_tag=RM680_RS05815;product=phage tail domain-containing protein;protein_id=WP_311563524.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	178509	179687	.	+	.	ID=gene-RM680_RS05820;Name=RM680_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05820;old_locus_tag=RM680_05825
NZ_JAVRJI010000005.1	Protein Homology	CDS	178509	179687	.	+	0	ID=cds-WP_002458425.1;Parent=gene-RM680_RS05820;Dbxref=GenBank:WP_002458425.1;Name=WP_002458425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458425.1;locus_tag=RM680_RS05820;product=phage tail protein;protein_id=WP_002458425.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	179674	179895	.	+	.	ID=gene-RM680_RS05825;Name=RM680_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05825;old_locus_tag=RM680_05830
NZ_JAVRJI010000005.1	Protein Homology	CDS	179674	179895	.	+	0	ID=cds-WP_002484790.1;Parent=gene-RM680_RS05825;Dbxref=GenBank:WP_002484790.1;Name=WP_002484790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504466.1;locus_tag=RM680_RS05825;product=hypothetical protein;protein_id=WP_002484790.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	179879	180475	.	+	.	ID=gene-RM680_RS05830;Name=RM680_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05830;old_locus_tag=RM680_05835
NZ_JAVRJI010000005.1	Protein Homology	CDS	179879	180475	.	+	0	ID=cds-WP_002458424.1;Parent=gene-RM680_RS05830;Dbxref=GenBank:WP_002458424.1;Name=WP_002458424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458424.1;locus_tag=RM680_RS05830;product=hypothetical protein;protein_id=WP_002458424.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	180488	181504	.	+	.	ID=gene-RM680_RS05835;Name=RM680_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05835;old_locus_tag=RM680_05840
NZ_JAVRJI010000005.1	Protein Homology	CDS	180488	181504	.	+	0	ID=cds-WP_002458423.1;Parent=gene-RM680_RS05835;Dbxref=GenBank:WP_002458423.1;Name=WP_002458423.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458423.1;locus_tag=RM680_RS05835;product=SGNH/GDSL hydrolase family protein;protein_id=WP_002458423.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	181522	182799	.	+	.	ID=gene-RM680_RS05840;Name=RM680_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05840;old_locus_tag=RM680_05845
NZ_JAVRJI010000005.1	Protein Homology	CDS	181522	182799	.	+	0	ID=cds-WP_002484785.1;Parent=gene-RM680_RS05840;Dbxref=GenBank:WP_002484785.1;Name=WP_002484785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484785.1;locus_tag=RM680_RS05840;product=BppU family phage baseplate upper protein;protein_id=WP_002484785.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	182823	183218	.	+	.	ID=gene-RM680_RS05845;Name=RM680_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05845;old_locus_tag=RM680_05850
NZ_JAVRJI010000005.1	Protein Homology	CDS	182823	183218	.	+	0	ID=cds-WP_002484783.1;Parent=gene-RM680_RS05845;Dbxref=GenBank:WP_002484783.1;Name=WP_002484783.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484783.1;locus_tag=RM680_RS05845;product=phage holin family protein;protein_id=WP_002484783.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	183258	184175	.	+	.	ID=gene-RM680_RS05850;Name=RM680_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05850;old_locus_tag=RM680_05855
NZ_JAVRJI010000005.1	Protein Homology	CDS	183258	184175	.	+	0	ID=cds-WP_002458419.1;Parent=gene-RM680_RS05850;Dbxref=GenBank:WP_002458419.1;Name=WP_002458419.1;Ontology_term=GO:0045087,GO:0008745,GO:0016019,GO:0042834,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan immune receptor activity|0016019||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=innate immune response|0045087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458419.1;locus_tag=RM680_RS05850;product=peptidoglycan recognition protein family protein;protein_id=WP_002458419.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	184354	185127	.	+	.	ID=gene-RM680_RS05855;Name=RM680_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05855;old_locus_tag=RM680_05860
NZ_JAVRJI010000005.1	Protein Homology	CDS	184354	185127	.	+	0	ID=cds-WP_002458418.1;Parent=gene-RM680_RS05855;Dbxref=GenBank:WP_002458418.1;Name=WP_002458418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458418.1;locus_tag=RM680_RS05855;product=HipA family kinase;protein_id=WP_002458418.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	185134	185865	.	+	.	ID=gene-RM680_RS05860;Name=RM680_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05860;old_locus_tag=RM680_05865
NZ_JAVRJI010000005.1	Protein Homology	CDS	185134	185865	.	+	0	ID=cds-WP_002484791.1;Parent=gene-RM680_RS05860;Dbxref=GenBank:WP_002484791.1;Name=WP_002484791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484791.1;locus_tag=RM680_RS05860;product=hypothetical protein;protein_id=WP_002484791.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	186255	186467	.	+	.	ID=gene-RM680_RS05865;Name=RM680_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05865;old_locus_tag=RM680_05870
NZ_JAVRJI010000005.1	Protein Homology	CDS	186255	186467	.	+	0	ID=cds-WP_002457563.1;Parent=gene-RM680_RS05865;Dbxref=GenBank:WP_002457563.1;Name=WP_002457563.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457563.1;locus_tag=RM680_RS05865;product=helix-turn-helix domain-containing protein;protein_id=WP_002457563.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	187012	187173	.	+	.	ID=gene-RM680_RS05870;Name=RM680_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05870;old_locus_tag=RM680_05875
NZ_JAVRJI010000005.1	GeneMarkS-2+	CDS	187012	187173	.	+	0	ID=cds-WP_311563525.1;Parent=gene-RM680_RS05870;Dbxref=GenBank:WP_311563525.1;Name=WP_311563525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS05870;product=hypothetical protein;protein_id=WP_311563525.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	187195	187617	.	+	.	ID=gene-RM680_RS05875;Name=RM680_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05875;old_locus_tag=RM680_05880
NZ_JAVRJI010000005.1	Protein Homology	CDS	187195	187617	.	+	0	ID=cds-WP_311563526.1;Parent=gene-RM680_RS05875;Dbxref=GenBank:WP_311563526.1;Name=WP_311563526.1;Ontology_term=GO:0016032,GO:0019068,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral process|0016032||IEA,virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01641.1;locus_tag=RM680_RS05875;product=minor capsid protein;protein_id=WP_311563526.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	187660	188013	.	+	.	ID=gene-RM680_RS05880;Name=RM680_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05880;old_locus_tag=RM680_05885
NZ_JAVRJI010000005.1	Protein Homology	CDS	187660	188013	.	+	0	ID=cds-WP_002456552.1;Parent=gene-RM680_RS05880;Dbxref=GenBank:WP_002456552.1;Name=WP_002456552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456552.1;locus_tag=RM680_RS05880;product=polymorphic toxin type 50 domain-containing protein;protein_id=WP_002456552.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	188015	188209	.	+	.	ID=gene-RM680_RS05885;Name=RM680_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05885;old_locus_tag=RM680_05890
NZ_JAVRJI010000005.1	Protein Homology	CDS	188015	188209	.	+	0	ID=cds-WP_002456551.1;Parent=gene-RM680_RS05885;Dbxref=GenBank:WP_002456551.1;Name=WP_002456551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456551.1;locus_tag=RM680_RS05885;product=hypothetical protein;protein_id=WP_002456551.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	pseudogene	188286	188382	.	+	.	ID=gene-RM680_RS05890;Name=RM680_RS05890;end_range=188382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS05890;old_locus_tag=RM680_05895;partial=true;pseudo=true;start_range=.,188286
NZ_JAVRJI010000005.1	Protein Homology	CDS	188286	188382	.	+	0	ID=cds-RM680_RS05890;Parent=gene-RM680_RS05890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=188382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499829.1;locus_tag=RM680_RS05890;partial=true;product=hypothetical protein;pseudo=true;start_range=.,188286;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	188370	188537	.	+	.	ID=gene-RM680_RS05895;Name=RM680_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05895;old_locus_tag=RM680_05900
NZ_JAVRJI010000005.1	Protein Homology	CDS	188370	188537	.	+	0	ID=cds-WP_002456550.1;Parent=gene-RM680_RS05895;Dbxref=GenBank:WP_002456550.1;Name=WP_002456550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456550.1;locus_tag=RM680_RS05895;product=hypothetical protein;protein_id=WP_002456550.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	188573	188917	.	+	.	ID=gene-RM680_RS05900;Name=RM680_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05900;old_locus_tag=RM680_05905
NZ_JAVRJI010000005.1	Protein Homology	CDS	188573	188917	.	+	0	ID=cds-WP_306453074.1;Parent=gene-RM680_RS05900;Dbxref=GenBank:WP_306453074.1;Name=WP_306453074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829521.1;locus_tag=RM680_RS05900;product=DUF4355 domain-containing protein;protein_id=WP_306453074.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	189168	189851	.	-	.	ID=gene-RM680_RS05905;Name=RM680_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05905;old_locus_tag=RM680_05910
NZ_JAVRJI010000005.1	Protein Homology	CDS	189168	189851	.	-	0	ID=cds-WP_002456548.1;Parent=gene-RM680_RS05905;Dbxref=GenBank:WP_002456548.1;Name=WP_002456548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473553.1;locus_tag=RM680_RS05905;product=Ltp family lipoprotein;protein_id=WP_002456548.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	189921	190946	.	-	.	ID=gene-RM680_RS05910;Name=RM680_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05910;old_locus_tag=RM680_05915
NZ_JAVRJI010000005.1	Protein Homology	CDS	189921	190946	.	-	0	ID=cds-WP_002456217.1;Parent=gene-RM680_RS05910;Dbxref=GenBank:WP_002456217.1;Name=WP_002456217.1;Ontology_term=GO:0006567,GO:0004793;gbkey=CDS;go_function=threonine aldolase activity|0004793||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499838.1;locus_tag=RM680_RS05910;product=threonine aldolase family protein;protein_id=WP_002456217.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	191260	191457	.	+	.	ID=gene-RM680_RS05915;Name=RM680_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05915;old_locus_tag=RM680_05920
NZ_JAVRJI010000005.1	Protein Homology	CDS	191260	191457	.	+	0	ID=cds-WP_001829481.1;Parent=gene-RM680_RS05915;Dbxref=GenBank:WP_001829481.1;Name=WP_001829481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829481.1;locus_tag=RM680_RS05915;product=hypothetical protein;protein_id=WP_001829481.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	191515	192987	.	+	.	ID=gene-RM680_RS05920;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=RM680_RS05920;old_locus_tag=RM680_05925
NZ_JAVRJI010000005.1	Protein Homology	CDS	191515	192987	.	+	0	ID=cds-WP_002456547.1;Parent=gene-RM680_RS05920;Dbxref=GenBank:WP_002456547.1;Name=WP_002456547.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505271.1;locus_tag=RM680_RS05920;product=cardiolipin synthase;protein_id=WP_002456547.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	193165	194040	.	+	.	ID=gene-RM680_RS05925;Name=RM680_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05925;old_locus_tag=RM680_05930
NZ_JAVRJI010000005.1	Protein Homology	CDS	193165	194040	.	+	0	ID=cds-WP_020368258.1;Parent=gene-RM680_RS05925;Dbxref=GenBank:WP_020368258.1;Name=WP_020368258.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493675.1;locus_tag=RM680_RS05925;product=ABC transporter ATP-binding protein;protein_id=WP_020368258.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	194037	194768	.	+	.	ID=gene-RM680_RS05930;Name=RM680_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05930;old_locus_tag=RM680_05935
NZ_JAVRJI010000005.1	Protein Homology	CDS	194037	194768	.	+	0	ID=cds-WP_002469377.1;Parent=gene-RM680_RS05930;Dbxref=GenBank:WP_002469377.1;Name=WP_002469377.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494989.1;locus_tag=RM680_RS05930;product=ABC transporter permease;protein_id=WP_002469377.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	194768	195862	.	+	.	ID=gene-RM680_RS05935;Name=RM680_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05935;old_locus_tag=RM680_05940
NZ_JAVRJI010000005.1	Protein Homology	CDS	194768	195862	.	+	0	ID=cds-WP_002456544.1;Parent=gene-RM680_RS05935;Dbxref=GenBank:WP_002456544.1;Name=WP_002456544.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476684.1;locus_tag=RM680_RS05935;product=sensor histidine kinase;protein_id=WP_002456544.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	195859	196461	.	+	.	ID=gene-RM680_RS05940;Name=RM680_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05940;old_locus_tag=RM680_05945
NZ_JAVRJI010000005.1	Protein Homology	CDS	195859	196461	.	+	0	ID=cds-WP_002439610.1;Parent=gene-RM680_RS05940;Dbxref=GenBank:WP_002439610.1;Name=WP_002439610.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439610.1;locus_tag=RM680_RS05940;product=response regulator transcription factor;protein_id=WP_002439610.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	196630	196818	.	-	.	ID=gene-RM680_RS05945;Name=RM680_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05945;old_locus_tag=RM680_05950
NZ_JAVRJI010000005.1	Protein Homology	CDS	196630	196818	.	-	0	ID=cds-WP_001829458.1;Parent=gene-RM680_RS05945;Dbxref=GenBank:WP_001829458.1;Name=WP_001829458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829458.1;locus_tag=RM680_RS05945;product=membrane protein;protein_id=WP_001829458.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	196983	197519	.	+	.	ID=gene-RM680_RS05950;Name=nucI;gbkey=Gene;gene=nucI;gene_biotype=protein_coding;locus_tag=RM680_RS05950;old_locus_tag=RM680_05955
NZ_JAVRJI010000005.1	Protein Homology	CDS	196983	197519	.	+	0	ID=cds-WP_002468003.1;Parent=gene-RM680_RS05950;Dbxref=GenBank:WP_002468003.1;Name=WP_002468003.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;gene=nucI;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500838.1;locus_tag=RM680_RS05950;product=thermonuclease NucI;protein_id=WP_002468003.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	198255	199127	.	-	.	ID=gene-RM680_RS05955;Name=RM680_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05955;old_locus_tag=RM680_05960
NZ_JAVRJI010000005.1	Protein Homology	CDS	198255	199127	.	-	0	ID=cds-WP_002468460.1;Parent=gene-RM680_RS05955;Dbxref=GenBank:WP_002468460.1;Name=WP_002468460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476687.1;locus_tag=RM680_RS05955;product=hypothetical protein;protein_id=WP_002468460.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	199454	200053	.	+	.	ID=gene-RM680_RS05960;Name=RM680_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05960;old_locus_tag=RM680_05965
NZ_JAVRJI010000005.1	Protein Homology	CDS	199454	200053	.	+	0	ID=cds-WP_002439621.1;Parent=gene-RM680_RS05960;Dbxref=GenBank:WP_002439621.1;Name=WP_002439621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439621.1;locus_tag=RM680_RS05960;product=hypothetical protein;protein_id=WP_002439621.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	200131	201507	.	-	.	ID=gene-RM680_RS05965;Name=RM680_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05965;old_locus_tag=RM680_05970
NZ_JAVRJI010000005.1	Protein Homology	CDS	200131	201507	.	-	0	ID=cds-WP_001829461.1;Parent=gene-RM680_RS05965;Dbxref=GenBank:WP_001829461.1;Name=WP_001829461.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829461.1;locus_tag=RM680_RS05965;product=aspartate kinase;protein_id=WP_001829461.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	201696	202976	.	+	.	ID=gene-RM680_RS05970;Name=RM680_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05970;old_locus_tag=RM680_05975
NZ_JAVRJI010000005.1	Protein Homology	CDS	201696	202976	.	+	0	ID=cds-WP_002468463.1;Parent=gene-RM680_RS05970;Dbxref=GenBank:WP_002468463.1;Name=WP_002468463.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499850.1;locus_tag=RM680_RS05970;product=homoserine dehydrogenase;protein_id=WP_002468463.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	202982	204046	.	+	.	ID=gene-RM680_RS05975;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=RM680_RS05975;old_locus_tag=RM680_05980
NZ_JAVRJI010000005.1	Protein Homology	CDS	202982	204046	.	+	0	ID=cds-WP_002456539.1;Parent=gene-RM680_RS05975;Dbxref=GenBank:WP_002456539.1;Name=WP_002456539.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499851.1;locus_tag=RM680_RS05975;product=threonine synthase;protein_id=WP_002456539.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	204048	204968	.	+	.	ID=gene-RM680_RS05980;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=RM680_RS05980;old_locus_tag=RM680_05985
NZ_JAVRJI010000005.1	Protein Homology	CDS	204048	204968	.	+	0	ID=cds-WP_002456538.1;Parent=gene-RM680_RS05980;Dbxref=GenBank:WP_002456538.1;Name=WP_002456538.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457510.1;locus_tag=RM680_RS05980;product=homoserine kinase;protein_id=WP_002456538.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	gene	205031	205837	.	+	.	ID=gene-RM680_RS05985;Name=RM680_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS05985;old_locus_tag=RM680_05990
NZ_JAVRJI010000005.1	Protein Homology	CDS	205031	205837	.	+	0	ID=cds-WP_001829516.1;Parent=gene-RM680_RS05985;Dbxref=GenBank:WP_001829516.1;Name=WP_001829516.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829516.1;locus_tag=RM680_RS05985;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_001829516.1;transl_table=11
NZ_JAVRJI010000005.1	RefSeq	pseudogene	206179	206255	.	+	.	ID=gene-RM680_RS05990;Name=RM680_RS05990;end_range=206255,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS05990;partial=true;pseudo=true
NZ_JAVRJI010000005.1	Protein Homology	CDS	206179	206255	.	+	0	ID=cds-RM680_RS05990;Parent=gene-RM680_RS05990;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=206255,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=RM680_RS05990;partial=true;product=IS200/IS605 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JAVRJI010000006.1 1 180587
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000006.1	RefSeq	region	1	180587	.	+	.	ID=NZ_JAVRJI010000006.1:1..180587;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000006.1	RefSeq	gene	1	75	.	-	.	ID=gene-RM680_RS05995;Name=RM680_RS05995;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM680_RS05995;old_locus_tag=RM680_06000;partial=true;start_range=.,1
NZ_JAVRJI010000006.1	cmsearch	rRNA	1	75	.	-	.	ID=rna-RM680_RS05995;Parent=gene-RM680_RS05995;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS05995;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JAVRJI010000006.1	cmsearch	exon	1	75	.	-	.	ID=exon-RM680_RS05995-1;Parent=rna-RM680_RS05995;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS05995;partial=true;product=16S ribosomal RNA;start_range=.,1
NZ_JAVRJI010000006.1	RefSeq	gene	851	1447	.	-	.	ID=gene-RM680_RS06000;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=RM680_RS06000;old_locus_tag=RM680_06005
NZ_JAVRJI010000006.1	Protein Homology	CDS	851	1447	.	-	0	ID=cds-WP_001829377.1;Parent=gene-RM680_RS06000;Dbxref=GenBank:WP_001829377.1;Name=WP_001829377.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383386.1;locus_tag=RM680_RS06000;product=recombination mediator RecR;protein_id=WP_001829377.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	1454	1771	.	-	.	ID=gene-RM680_RS06005;Name=RM680_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06005;old_locus_tag=RM680_06010
NZ_JAVRJI010000006.1	Protein Homology	CDS	1454	1771	.	-	0	ID=cds-WP_001829343.1;Parent=gene-RM680_RS06005;Dbxref=GenBank:WP_001829343.1;Name=WP_001829343.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479279.1;locus_tag=RM680_RS06005;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_001829343.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	1860	3566	.	-	.	ID=gene-RM680_RS06010;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=RM680_RS06010;old_locus_tag=RM680_06015
NZ_JAVRJI010000006.1	Protein Homology	CDS	1860	3566	.	-	0	ID=cds-WP_020368091.1;Parent=gene-RM680_RS06010;Dbxref=GenBank:WP_020368091.1;Name=WP_020368091.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458570.1;locus_tag=RM680_RS06010;product=DNA polymerase III subunit gamma/tau;protein_id=WP_020368091.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	3633	4163	.	-	.	ID=gene-RM680_RS06015;Name=RM680_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06015;old_locus_tag=RM680_06020
NZ_JAVRJI010000006.1	Protein Homology	CDS	3633	4163	.	-	0	ID=cds-WP_001829347.1;Parent=gene-RM680_RS06015;Dbxref=GenBank:WP_001829347.1;Name=WP_001829347.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458571.1;locus_tag=RM680_RS06015;product=GNAT family N-acetyltransferase;protein_id=WP_001829347.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	4534	4803	.	-	.	ID=gene-RM680_RS06020;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=RM680_RS06020;old_locus_tag=RM680_06025
NZ_JAVRJI010000006.1	cmsearch	SRP_RNA	4534	4803	.	-	.	ID=rna-RM680_RS06020;Parent=gene-RM680_RS06020;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS06020;product=signal recognition particle sRNA large type
NZ_JAVRJI010000006.1	cmsearch	exon	4534	4803	.	-	.	ID=exon-RM680_RS06020-1;Parent=rna-RM680_RS06020;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS06020;product=signal recognition particle sRNA large type
NZ_JAVRJI010000006.1	RefSeq	pseudogene	4911	5131	.	-	.	ID=gene-RM680_RS06025;Name=RM680_RS06025;end_range=5131,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS06025;old_locus_tag=RM680_06030;partial=true;pseudo=true
NZ_JAVRJI010000006.1	Protein Homology	CDS	4911	5131	.	-	0	ID=cds-RM680_RS06025;Parent=gene-RM680_RS06025;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5131,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830702.1;locus_tag=RM680_RS06025;partial=true;product=trehalose operon repressor;pseudo=true;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	5321	6316	.	-	.	ID=gene-RM680_RS06030;Name=RM680_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06030;old_locus_tag=RM680_06035
NZ_JAVRJI010000006.1	Protein Homology	CDS	5321	6316	.	-	0	ID=cds-WP_001829391.1;Parent=gene-RM680_RS06030;Dbxref=GenBank:WP_001829391.1;Name=WP_001829391.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829391.1;locus_tag=RM680_RS06030;product=YeiH family protein;protein_id=WP_001829391.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	6431	7252	.	+	.	ID=gene-RM680_RS06035;Name=RM680_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06035;old_locus_tag=RM680_06040
NZ_JAVRJI010000006.1	Protein Homology	CDS	6431	7252	.	+	0	ID=cds-WP_001829404.1;Parent=gene-RM680_RS06035;Dbxref=GenBank:WP_001829404.1;Name=WP_001829404.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458575.1;locus_tag=RM680_RS06035;product=LysR family transcriptional regulator;protein_id=WP_001829404.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	7330	7422	.	-	.	ID=gene-RM680_RS06040;Name=RM680_RS06040;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS06040;old_locus_tag=RM680_06045
NZ_JAVRJI010000006.1	tRNAscan-SE	tRNA	7330	7422	.	-	.	ID=rna-RM680_RS06040;Parent=gene-RM680_RS06040;anticodon=(pos:complement(7384..7386));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS06040;product=tRNA-Ser
NZ_JAVRJI010000006.1	tRNAscan-SE	exon	7330	7422	.	-	.	ID=exon-RM680_RS06040-1;Parent=rna-RM680_RS06040;anticodon=(pos:complement(7384..7386));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS06040;product=tRNA-Ser
NZ_JAVRJI010000006.1	RefSeq	gene	7485	8948	.	-	.	ID=gene-RM680_RS06045;Name=RM680_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06045;old_locus_tag=RM680_06050
NZ_JAVRJI010000006.1	Protein Homology	CDS	7485	8948	.	-	0	ID=cds-WP_001829340.1;Parent=gene-RM680_RS06045;Dbxref=GenBank:WP_001829340.1;Name=WP_001829340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499019.1;locus_tag=RM680_RS06045;product=glutamate synthase subunit beta;protein_id=WP_001829340.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	8966	13462	.	-	.	ID=gene-RM680_RS06050;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=RM680_RS06050;old_locus_tag=RM680_06055
NZ_JAVRJI010000006.1	Protein Homology	CDS	8966	13462	.	-	0	ID=cds-WP_001832455.1;Parent=gene-RM680_RS06050;Dbxref=GenBank:WP_001832455.1;Name=WP_001832455.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499018.1;locus_tag=RM680_RS06050;product=glutamate synthase large subunit;protein_id=WP_001832455.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	13654	14535	.	+	.	ID=gene-RM680_RS06055;Name=gltC;gbkey=Gene;gene=gltC;gene_biotype=protein_coding;locus_tag=RM680_RS06055;old_locus_tag=RM680_06060
NZ_JAVRJI010000006.1	Protein Homology	CDS	13654	14535	.	+	0	ID=cds-WP_001829385.1;Parent=gene-RM680_RS06055;Dbxref=GenBank:WP_001829385.1;Name=WP_001829385.1;Ontology_term=GO:1902065,GO:0003700;gbkey=CDS;gene=gltC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=response to L-glutamate|1902065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491712.1;locus_tag=RM680_RS06055;product=glutamate biosynthesis transcriptional regulator GltC;protein_id=WP_001829385.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	14672	15784	.	+	.	ID=gene-RM680_RS06060;Name=RM680_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06060;old_locus_tag=RM680_06065
NZ_JAVRJI010000006.1	Protein Homology	CDS	14672	15784	.	+	0	ID=cds-WP_002437110.1;Parent=gene-RM680_RS06060;Dbxref=GenBank:WP_002437110.1;Name=WP_002437110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491705.1;locus_tag=RM680_RS06060;product=YibE/F family protein;protein_id=WP_002437110.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	15781	16566	.	+	.	ID=gene-RM680_RS06065;Name=RM680_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06065;old_locus_tag=RM680_06070
NZ_JAVRJI010000006.1	Protein Homology	CDS	15781	16566	.	+	0	ID=cds-WP_001829362.1;Parent=gene-RM680_RS06065;Dbxref=GenBank:WP_001829362.1;Name=WP_001829362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496944.1;locus_tag=RM680_RS06065;product=YibE/F family protein;protein_id=WP_001829362.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	17079	17465	.	-	.	ID=gene-RM680_RS06070;Name=RM680_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06070;old_locus_tag=RM680_06075
NZ_JAVRJI010000006.1	Protein Homology	CDS	17079	17465	.	-	0	ID=cds-WP_001829379.1;Parent=gene-RM680_RS06070;Dbxref=GenBank:WP_001829379.1;Name=WP_001829379.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504019.1;locus_tag=RM680_RS06070;product=NUDIX domain-containing protein;protein_id=WP_001829379.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	17653	17931	.	+	.	ID=gene-RM680_RS06075;Name=RM680_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06075;old_locus_tag=RM680_06080
NZ_JAVRJI010000006.1	Protein Homology	CDS	17653	17931	.	+	0	ID=cds-WP_001829373.1;Parent=gene-RM680_RS06075;Dbxref=GenBank:WP_001829373.1;Name=WP_001829373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829373.1;locus_tag=RM680_RS06075;product=hypothetical protein;protein_id=WP_001829373.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	18306	19811	.	+	.	ID=gene-RM680_RS06080;Name=RM680_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06080;old_locus_tag=RM680_06085
NZ_JAVRJI010000006.1	Protein Homology	CDS	18306	19811	.	+	0	ID=cds-WP_001829378.1;Parent=gene-RM680_RS06080;Dbxref=GenBank:WP_001829378.1;Name=WP_001829378.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493895.1;locus_tag=RM680_RS06080;product=glycosyltransferase;protein_id=WP_001829378.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	19938	20912	.	-	.	ID=gene-RM680_RS06085;Name=aae;gbkey=Gene;gene=aae;gene_biotype=protein_coding;locus_tag=RM680_RS06085;old_locus_tag=RM680_06090
NZ_JAVRJI010000006.1	Protein Homology	CDS	19938	20912	.	-	0	ID=cds-WP_001829380.1;Parent=gene-RM680_RS06085;Dbxref=GenBank:WP_001829380.1;Name=WP_001829380.1;gbkey=CDS;gene=aae;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499011.1;locus_tag=RM680_RS06085;product=autolysin/adhesin Aae;protein_id=WP_001829380.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	21437	22282	.	-	.	ID=gene-RM680_RS06090;Name=gmpC;gbkey=Gene;gene=gmpC;gene_biotype=protein_coding;locus_tag=RM680_RS06090;old_locus_tag=RM680_06095
NZ_JAVRJI010000006.1	Protein Homology	CDS	21437	22282	.	-	0	ID=cds-WP_001829383.1;Parent=gene-RM680_RS06090;Dbxref=GenBank:WP_001829383.1;Name=WP_001829383.1;gbkey=CDS;gene=gmpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496942.1;locus_tag=RM680_RS06090;product=dipeptide ABC transporter glycylmethionine-binding lipoprotein;protein_id=WP_001829383.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	22326	22985	.	-	.	ID=gene-RM680_RS06095;Name=RM680_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06095;old_locus_tag=RM680_06100
NZ_JAVRJI010000006.1	Protein Homology	CDS	22326	22985	.	-	0	ID=cds-WP_001829353.1;Parent=gene-RM680_RS06095;Dbxref=GenBank:WP_001829353.1;Name=WP_001829353.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499009.1;locus_tag=RM680_RS06095;product=methionine ABC transporter permease;protein_id=WP_001829353.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	22988	24013	.	-	.	ID=gene-RM680_RS06100;Name=RM680_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06100;old_locus_tag=RM680_06105
NZ_JAVRJI010000006.1	Protein Homology	CDS	22988	24013	.	-	0	ID=cds-WP_001832450.1;Parent=gene-RM680_RS06100;Dbxref=GenBank:WP_001832450.1;Name=WP_001832450.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832450.1;locus_tag=RM680_RS06100;product=methionine ABC transporter ATP-binding protein;protein_id=WP_001832450.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	24260	25405	.	-	.	ID=gene-RM680_RS06105;Name=RM680_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06105;old_locus_tag=RM680_06110
NZ_JAVRJI010000006.1	Protein Homology	CDS	24260	25405	.	-	0	ID=cds-WP_001829386.1;Parent=gene-RM680_RS06105;Dbxref=GenBank:WP_001829386.1;Name=WP_001829386.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505938.1;locus_tag=RM680_RS06105;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;protein_id=WP_001829386.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	25398	26306	.	-	.	ID=gene-RM680_RS06110;Name=RM680_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06110;old_locus_tag=RM680_06115
NZ_JAVRJI010000006.1	Protein Homology	CDS	25398	26306	.	-	0	ID=cds-WP_001829369.1;Parent=gene-RM680_RS06110;Dbxref=GenBank:WP_001829369.1;Name=WP_001829369.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475253.1;locus_tag=RM680_RS06110;product=PLP-dependent cysteine synthase family protein;protein_id=WP_001829369.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	26615	27154	.	+	.	ID=gene-RM680_RS06115;Name=RM680_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06115;old_locus_tag=RM680_06120
NZ_JAVRJI010000006.1	Protein Homology	CDS	26615	27154	.	+	0	ID=cds-WP_001829364.1;Parent=gene-RM680_RS06115;Dbxref=GenBank:WP_001829364.1;Name=WP_001829364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829364.1;locus_tag=RM680_RS06115;product=pentapeptide repeat-containing protein;protein_id=WP_001829364.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	27333	28661	.	-	.	ID=gene-RM680_RS06120;Name=RM680_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06120;old_locus_tag=RM680_06125
NZ_JAVRJI010000006.1	Protein Homology	CDS	27333	28661	.	-	0	ID=cds-WP_001829393.1;Parent=gene-RM680_RS06120;Dbxref=GenBank:WP_001829393.1;Name=WP_001829393.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502697.1;locus_tag=RM680_RS06120;product=sodium-dependent transporter;protein_id=WP_001829393.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	28806	29048	.	-	.	ID=gene-RM680_RS06125;Name=RM680_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06125;old_locus_tag=RM680_06130
NZ_JAVRJI010000006.1	Protein Homology	CDS	28806	29048	.	-	0	ID=cds-WP_001829367.1;Parent=gene-RM680_RS06125;Dbxref=GenBank:WP_001829367.1;Name=WP_001829367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490234.1;locus_tag=RM680_RS06125;product=hypothetical protein;protein_id=WP_001829367.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	29063	29791	.	-	.	ID=gene-RM680_RS06130;Name=RM680_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06130;old_locus_tag=RM680_06135
NZ_JAVRJI010000006.1	Protein Homology	CDS	29063	29791	.	-	0	ID=cds-WP_001829394.1;Parent=gene-RM680_RS06130;Dbxref=GenBank:WP_001829394.1;Name=WP_001829394.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477450.1;locus_tag=RM680_RS06130;product=alpha/beta hydrolase;protein_id=WP_001829394.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	29898	30569	.	-	.	ID=gene-RM680_RS06135;Name=RM680_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06135;old_locus_tag=RM680_06140
NZ_JAVRJI010000006.1	Protein Homology	CDS	29898	30569	.	-	0	ID=cds-WP_001829381.1;Parent=gene-RM680_RS06135;Dbxref=GenBank:WP_001829381.1;Name=WP_001829381.1;Ontology_term=GO:0006629,GO:1901137,GO:0016791,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatase activity|0016791||IEA;go_process=lipid metabolic process|0006629||IEA,carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494843.1;locus_tag=RM680_RS06135;product=phosphatase PAP2 family protein;protein_id=WP_001829381.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	30821	31069	.	+	.	ID=gene-RM680_RS06140;Name=RM680_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06140;old_locus_tag=RM680_06145
NZ_JAVRJI010000006.1	Protein Homology	CDS	30821	31069	.	+	0	ID=cds-WP_001829374.1;Parent=gene-RM680_RS06140;Dbxref=GenBank:WP_001829374.1;Name=WP_001829374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493889.1;locus_tag=RM680_RS06140;product=hypothetical protein;protein_id=WP_001829374.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	31111	31479	.	-	.	ID=gene-RM680_RS06145;Name=RM680_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06145;old_locus_tag=RM680_06150
NZ_JAVRJI010000006.1	Protein Homology	CDS	31111	31479	.	-	0	ID=cds-WP_001829349.1;Parent=gene-RM680_RS06145;Dbxref=GenBank:WP_001829349.1;Name=WP_001829349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829349.1;locus_tag=RM680_RS06145;product=DUF2294 domain-containing protein;protein_id=WP_001829349.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	31592	34159	.	-	.	ID=gene-RM680_RS06150;Name=RM680_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06150;old_locus_tag=RM680_06155
NZ_JAVRJI010000006.1	Protein Homology	CDS	31592	34159	.	-	0	ID=cds-WP_002437142.1;Parent=gene-RM680_RS06150;Dbxref=GenBank:WP_002437142.1;Name=WP_002437142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437142.1;locus_tag=RM680_RS06150;product=DUF2309 domain-containing protein;protein_id=WP_002437142.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	34177	35673	.	-	.	ID=gene-RM680_RS06155;Name=RM680_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06155;old_locus_tag=RM680_06160
NZ_JAVRJI010000006.1	Protein Homology	CDS	34177	35673	.	-	0	ID=cds-WP_002437143.1;Parent=gene-RM680_RS06155;Dbxref=GenBank:WP_002437143.1;Name=WP_002437143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082823.1;locus_tag=RM680_RS06155;product=NADH dehydrogenase subunit 5;protein_id=WP_002437143.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	36269	36337	.	+	.	ID=gene-RM680_RS11980;Name=RM680_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11980
NZ_JAVRJI010000006.1	Protein Homology	CDS	36269	36337	.	+	0	ID=cds-WP_096824640.1;Parent=gene-RM680_RS11980;Dbxref=GenBank:WP_096824640.1;Name=WP_096824640.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028373.6;locus_tag=RM680_RS11980;product=alpha-1/alpha-2 family phenol-soluble modulin;protein_id=WP_096824640.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	36428	36499	.	+	.	ID=gene-RM680_RS06160;Name=RM680_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06160;old_locus_tag=RM680_06165
NZ_JAVRJI010000006.1	Protein Homology	CDS	36428	36499	.	+	0	ID=cds-WP_087587975.1;Parent=gene-RM680_RS06160;Dbxref=GenBank:WP_087587975.1;Name=WP_087587975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_087587975.1;locus_tag=RM680_RS06160;product=phenol-soluble modulin PSM-delta;protein_id=WP_087587975.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	36744	37007	.	+	.	ID=gene-RM680_RS06165;Name=RM680_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06165;old_locus_tag=RM680_06170
NZ_JAVRJI010000006.1	Protein Homology	CDS	36744	37007	.	+	0	ID=cds-WP_001832458.1;Parent=gene-RM680_RS06165;Dbxref=GenBank:WP_001832458.1;Name=WP_001832458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487939.1;locus_tag=RM680_RS06165;product=hypothetical protein;protein_id=WP_001832458.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	37246	38448	.	-	.	ID=gene-RM680_RS06170;Name=RM680_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06170;old_locus_tag=RM680_06175
NZ_JAVRJI010000006.1	Protein Homology	CDS	37246	38448	.	-	0	ID=cds-WP_001829405.1;Parent=gene-RM680_RS06170;Dbxref=GenBank:WP_001829405.1;Name=WP_001829405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477446.1;locus_tag=RM680_RS06170;product=GTP-binding protein;protein_id=WP_001829405.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	38619	39002	.	-	.	ID=gene-RM680_RS06175;Name=RM680_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06175;old_locus_tag=RM680_06180
NZ_JAVRJI010000006.1	Protein Homology	CDS	38619	39002	.	-	0	ID=cds-WP_001829355.1;Parent=gene-RM680_RS06175;Dbxref=GenBank:WP_001829355.1;Name=WP_001829355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829355.1;locus_tag=RM680_RS06175;product=VOC family protein;protein_id=WP_001829355.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	39517	40545	.	-	.	ID=gene-RM680_RS06180;Name=RM680_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06180;old_locus_tag=RM680_06185
NZ_JAVRJI010000006.1	Protein Homology	CDS	39517	40545	.	-	0	ID=cds-WP_002455888.1;Parent=gene-RM680_RS06180;Dbxref=GenBank:WP_002455888.1;Name=WP_002455888.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511295.1;locus_tag=RM680_RS06180;product=PTS sugar transporter subunit IIC;protein_id=WP_002455888.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	41316	41507	.	+	.	ID=gene-RM680_RS06185;Name=RM680_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06185;old_locus_tag=RM680_06190
NZ_JAVRJI010000006.1	Protein Homology	CDS	41316	41507	.	+	0	ID=cds-WP_002455890.1;Parent=gene-RM680_RS06185;Dbxref=GenBank:WP_002455890.1;Name=WP_002455890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455890.1;locus_tag=RM680_RS06185;product=hypothetical protein;protein_id=WP_002455890.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	pseudogene	41489	42013	.	+	.	ID=gene-RM680_RS06190;Name=RM680_RS06190;end_range=42013,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS06190;partial=true;pseudo=true
NZ_JAVRJI010000006.1	Protein Homology	CDS	41489	42013	.	+	0	ID=cds-RM680_RS06190;Parent=gene-RM680_RS06190;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=42013,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019371.6;locus_tag=RM680_RS06190;partial=true;product=Abi family protein;pseudo=true;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	42017	42382	.	+	.	ID=gene-RM680_RS06195;Name=RM680_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06195
NZ_JAVRJI010000006.1	Protein Homology	CDS	42017	42382	.	+	0	ID=cds-WP_002455891.1;Parent=gene-RM680_RS06195;Dbxref=GenBank:WP_002455891.1;Name=WP_002455891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455891.1;locus_tag=RM680_RS06195;product=hypothetical protein;protein_id=WP_002455891.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	43384	43731	.	-	.	ID=gene-RM680_RS06200;Name=RM680_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06200;old_locus_tag=RM680_06200
NZ_JAVRJI010000006.1	Protein Homology	CDS	43384	43731	.	-	0	ID=cds-WP_002447711.1;Parent=gene-RM680_RS06200;Dbxref=GenBank:WP_002447711.1;Name=WP_002447711.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366422.1;locus_tag=RM680_RS06200;product=ArsR/SmtB family transcription factor;protein_id=WP_002447711.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	43750	44367	.	-	.	ID=gene-RM680_RS06205;Name=RM680_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06205;old_locus_tag=RM680_06205
NZ_JAVRJI010000006.1	Protein Homology	CDS	43750	44367	.	-	0	ID=cds-WP_002455892.1;Parent=gene-RM680_RS06205;Dbxref=GenBank:WP_002455892.1;Name=WP_002455892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465246.1;locus_tag=RM680_RS06205;product=CadD family cadmium resistance transporter;protein_id=WP_002455892.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	44508	44696	.	-	.	ID=gene-RM680_RS06210;Name=RM680_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06210;old_locus_tag=RM680_06210
NZ_JAVRJI010000006.1	Protein Homology	CDS	44508	44696	.	-	0	ID=cds-WP_002455893.1;Parent=gene-RM680_RS06210;Dbxref=GenBank:WP_002455893.1;Name=WP_002455893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455893.1;locus_tag=RM680_RS06210;product=hypothetical protein;protein_id=WP_002455893.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	44831	45016	.	-	.	ID=gene-RM680_RS06215;Name=RM680_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06215;old_locus_tag=RM680_06215
NZ_JAVRJI010000006.1	Protein Homology	CDS	44831	45016	.	-	0	ID=cds-WP_032601845.1;Parent=gene-RM680_RS06215;Dbxref=GenBank:WP_032601845.1;Name=WP_032601845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495134.1;locus_tag=RM680_RS06215;product=hypothetical protein;protein_id=WP_032601845.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	45306	46847	.	-	.	ID=gene-RM680_RS06220;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=RM680_RS06220;old_locus_tag=RM680_06220
NZ_JAVRJI010000006.1	Protein Homology	CDS	45306	46847	.	-	0	ID=cds-WP_002468031.1;Parent=gene-RM680_RS06220;Dbxref=GenBank:WP_002468031.1;Name=WP_002468031.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=RM680_RS06220;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_002468031.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	47014	48480	.	-	.	ID=gene-RM680_RS06225;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=RM680_RS06225;old_locus_tag=RM680_06225
NZ_JAVRJI010000006.1	Protein Homology	CDS	47014	48480	.	-	0	ID=cds-WP_001829407.1;Parent=gene-RM680_RS06225;Dbxref=GenBank:WP_001829407.1;Name=WP_001829407.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=RM680_RS06225;product=IMP dehydrogenase;protein_id=WP_001829407.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	48518	49786	.	-	.	ID=gene-RM680_RS06230;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=protein_coding;locus_tag=RM680_RS06230;old_locus_tag=RM680_06230
NZ_JAVRJI010000006.1	Protein Homology	CDS	48518	49786	.	-	0	ID=cds-WP_311563527.1;Parent=gene-RM680_RS06230;Dbxref=GenBank:WP_311563527.1;Name=WP_311563527.1;gbkey=CDS;gene=pbuX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793018.1;locus_tag=RM680_RS06230;product=xanthine permease PbuX;protein_id=WP_311563527.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	49786	50364	.	-	.	ID=gene-RM680_RS06235;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=RM680_RS06235;old_locus_tag=RM680_06235
NZ_JAVRJI010000006.1	Protein Homology	CDS	49786	50364	.	-	0	ID=cds-WP_001829410.1;Parent=gene-RM680_RS06235;Dbxref=GenBank:WP_001829410.1;Name=WP_001829410.1;Ontology_term=GO:0043101,GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829410.1;locus_tag=RM680_RS06235;product=xanthine phosphoribosyltransferase;protein_id=WP_001829410.1;transl_table=11
NZ_JAVRJI010000006.1	cmsearch	riboswitch	50647	50749	.	-	.	ID=id-NZ_JAVRJI010000006.1:50647..50749;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000006.1	RefSeq	gene	50961	51368	.	+	.	ID=gene-RM680_RS06240;Name=RM680_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06240;old_locus_tag=RM680_06240
NZ_JAVRJI010000006.1	Protein Homology	CDS	50961	51368	.	+	0	ID=cds-WP_001829411.1;Parent=gene-RM680_RS06240;Dbxref=GenBank:WP_001829411.1;Name=WP_001829411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497457.1;locus_tag=RM680_RS06240;product=general stress protein;protein_id=WP_001829411.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	51496	52161	.	+	.	ID=gene-RM680_RS06245;Name=RM680_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06245;old_locus_tag=RM680_06245
NZ_JAVRJI010000006.1	Protein Homology	CDS	51496	52161	.	+	0	ID=cds-WP_002455897.1;Parent=gene-RM680_RS06245;Dbxref=GenBank:WP_002455897.1;Name=WP_002455897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498185.1;locus_tag=RM680_RS06245;product=hypothetical protein;protein_id=WP_002455897.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	52287	53189	.	+	.	ID=gene-RM680_RS06250;Name=RM680_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06250;old_locus_tag=RM680_06250
NZ_JAVRJI010000006.1	Protein Homology	CDS	52287	53189	.	+	0	ID=cds-WP_001829387.1;Parent=gene-RM680_RS06250;Dbxref=GenBank:WP_001829387.1;Name=WP_001829387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468659.1;locus_tag=RM680_RS06250;product=hypothetical protein;protein_id=WP_001829387.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	53498	54886	.	+	.	ID=gene-RM680_RS06255;Name=RM680_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06255;old_locus_tag=RM680_06255
NZ_JAVRJI010000006.1	Protein Homology	CDS	53498	54886	.	+	0	ID=cds-WP_001829358.1;Parent=gene-RM680_RS06255;Dbxref=GenBank:WP_001829358.1;Name=WP_001829358.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458603.1;locus_tag=RM680_RS06255;product=L-cystine transporter;protein_id=WP_001829358.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	55008	55763	.	-	.	ID=gene-RM680_RS06260;Name=RM680_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06260;old_locus_tag=RM680_06260
NZ_JAVRJI010000006.1	Protein Homology	CDS	55008	55763	.	-	0	ID=cds-WP_002455899.1;Parent=gene-RM680_RS06260;Dbxref=GenBank:WP_002455899.1;Name=WP_002455899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455899.1;locus_tag=RM680_RS06260;product=NADPH-dependent oxidoreductase;protein_id=WP_002455899.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	55904	56683	.	+	.	ID=gene-RM680_RS06265;Name=RM680_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06265;old_locus_tag=RM680_06265
NZ_JAVRJI010000006.1	Protein Homology	CDS	55904	56683	.	+	0	ID=cds-WP_002455900.1;Parent=gene-RM680_RS06265;Dbxref=GenBank:WP_002455900.1;Name=WP_002455900.1;Ontology_term=GO:0008684,GO:0030145;gbkey=CDS;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455900.1;locus_tag=RM680_RS06265;product=2-keto-4-pentenoate hydratase;protein_id=WP_002455900.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	57128	57697	.	+	.	ID=gene-RM680_RS06270;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=RM680_RS06270;old_locus_tag=RM680_06270
NZ_JAVRJI010000006.1	Protein Homology	CDS	57128	57697	.	+	0	ID=cds-WP_002455901.1;Parent=gene-RM680_RS06270;Dbxref=GenBank:WP_002455901.1;Name=WP_002455901.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445177.1;locus_tag=RM680_RS06270;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_002455901.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	57712	59235	.	+	.	ID=gene-RM680_RS06275;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=RM680_RS06275;old_locus_tag=RM680_06275
NZ_JAVRJI010000006.1	Protein Homology	CDS	57712	59235	.	+	0	ID=cds-WP_002455902.1;Parent=gene-RM680_RS06275;Dbxref=GenBank:WP_002455902.1;Name=WP_002455902.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498953.1;locus_tag=RM680_RS06275;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_002455902.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	59496	60119	.	+	.	ID=gene-RM680_RS06280;Name=RM680_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06280;old_locus_tag=RM680_06280
NZ_JAVRJI010000006.1	Protein Homology	CDS	59496	60119	.	+	0	ID=cds-WP_002456828.1;Parent=gene-RM680_RS06280;Dbxref=GenBank:WP_002456828.1;Name=WP_002456828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475263.1;locus_tag=RM680_RS06280;product=NDxxF motif lipoprotein;protein_id=WP_002456828.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	60339	60716	.	+	.	ID=gene-RM680_RS06285;Name=RM680_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06285;old_locus_tag=RM680_06285
NZ_JAVRJI010000006.1	Protein Homology	CDS	60339	60716	.	+	0	ID=cds-WP_002437185.1;Parent=gene-RM680_RS06285;Dbxref=GenBank:WP_002437185.1;Name=WP_002437185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830923.1;locus_tag=RM680_RS06285;product=hypothetical protein;protein_id=WP_002437185.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	61075	61665	.	-	.	ID=gene-RM680_RS06290;Name=RM680_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06290;old_locus_tag=RM680_06290
NZ_JAVRJI010000006.1	Protein Homology	CDS	61075	61665	.	-	0	ID=cds-WP_002455906.1;Parent=gene-RM680_RS06290;Dbxref=GenBank:WP_002455906.1;Name=WP_002455906.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437189.1;locus_tag=RM680_RS06290;product=histidine phosphatase family protein;protein_id=WP_002455906.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	61686	62318	.	-	.	ID=gene-RM680_RS06295;Name=RM680_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06295;old_locus_tag=RM680_06295
NZ_JAVRJI010000006.1	Protein Homology	CDS	61686	62318	.	-	0	ID=cds-WP_001830914.1;Parent=gene-RM680_RS06295;Dbxref=GenBank:WP_001830914.1;Name=WP_001830914.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437191.1;locus_tag=RM680_RS06295;product=LysE family translocator;protein_id=WP_001830914.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	pseudogene	62481	62570	.	+	.	ID=gene-RM680_RS06300;Name=RM680_RS06300;end_range=62570,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS06300;old_locus_tag=RM680_06300;partial=true;pseudo=true
NZ_JAVRJI010000006.1	Protein Homology	CDS	62481	62570	.	+	0	ID=cds-RM680_RS06300;Parent=gene-RM680_RS06300;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=62570,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498948.1;locus_tag=RM680_RS06300;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	62792	63046	.	-	.	ID=gene-RM680_RS06305;Name=RM680_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06305;old_locus_tag=RM680_06305
NZ_JAVRJI010000006.1	Protein Homology	CDS	62792	63046	.	-	0	ID=cds-WP_001832461.1;Parent=gene-RM680_RS06305;Dbxref=GenBank:WP_001832461.1;Name=WP_001832461.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832461.1;locus_tag=RM680_RS06305;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_001832461.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	63268	63528	.	+	.	ID=gene-RM680_RS06310;Name=RM680_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06310;old_locus_tag=RM680_06310
NZ_JAVRJI010000006.1	Protein Homology	CDS	63268	63528	.	+	0	ID=cds-WP_001830921.1;Parent=gene-RM680_RS06310;Dbxref=GenBank:WP_001830921.1;Name=WP_001830921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458611.1;locus_tag=RM680_RS06310;product=hypothetical protein;protein_id=WP_001830921.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	63998	64240	.	-	.	ID=gene-RM680_RS06320;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=RM680_RS06320;old_locus_tag=RM680_06320
NZ_JAVRJI010000006.1	Protein Homology	CDS	63998	64240	.	-	0	ID=cds-WP_001831354.1;Parent=gene-RM680_RS06320;Dbxref=GenBank:WP_001831354.1;Name=WP_001831354.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484306.1;locus_tag=RM680_RS06320;product=30S ribosomal protein S18;protein_id=WP_001831354.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	64285	64794	.	-	.	ID=gene-RM680_RS06325;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=RM680_RS06325;old_locus_tag=RM680_06325
NZ_JAVRJI010000006.1	Protein Homology	CDS	64285	64794	.	-	0	ID=cds-WP_001831333.1;Parent=gene-RM680_RS06325;Dbxref=GenBank:WP_001831333.1;Name=WP_001831333.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498938.1;locus_tag=RM680_RS06325;product=single-stranded DNA-binding protein;protein_id=WP_001831333.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	64817	65113	.	-	.	ID=gene-RM680_RS06330;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=RM680_RS06330;old_locus_tag=RM680_06330
NZ_JAVRJI010000006.1	Protein Homology	CDS	64817	65113	.	-	0	ID=cds-WP_001831345.1;Parent=gene-RM680_RS06330;Dbxref=GenBank:WP_001831345.1;Name=WP_001831345.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831345.1;locus_tag=RM680_RS06330;product=30S ribosomal protein S6;protein_id=WP_001831345.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	65498	66307	.	+	.	ID=gene-RM680_RS06335;Name=RM680_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06335;old_locus_tag=RM680_06335
NZ_JAVRJI010000006.1	Protein Homology	CDS	65498	66307	.	+	0	ID=cds-WP_001831342.1;Parent=gene-RM680_RS06335;Dbxref=GenBank:WP_001831342.1;Name=WP_001831342.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490221.1;locus_tag=RM680_RS06335;product=GH25 family lysozyme;protein_id=WP_001831342.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	66381	66572	.	+	.	ID=gene-RM680_RS06340;Name=RM680_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06340;old_locus_tag=RM680_06340
NZ_JAVRJI010000006.1	Protein Homology	CDS	66381	66572	.	+	0	ID=cds-WP_001831355.1;Parent=gene-RM680_RS06340;Dbxref=GenBank:WP_001831355.1;Name=WP_001831355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498936.1;locus_tag=RM680_RS06340;product=hypothetical protein;protein_id=WP_001831355.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	66805	67902	.	-	.	ID=gene-RM680_RS06345;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=RM680_RS06345;old_locus_tag=RM680_06345
NZ_JAVRJI010000006.1	Protein Homology	CDS	66805	67902	.	-	0	ID=cds-WP_001831336.1;Parent=gene-RM680_RS06345;Dbxref=GenBank:WP_001831336.1;Name=WP_001831336.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1;locus_tag=RM680_RS06345;product=redox-regulated ATPase YchF;protein_id=WP_001831336.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	67914	68117	.	-	.	ID=gene-RM680_RS06350;Name=RM680_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06350;old_locus_tag=RM680_06350
NZ_JAVRJI010000006.1	Protein Homology	CDS	67914	68117	.	-	0	ID=cds-WP_001831361.1;Parent=gene-RM680_RS06350;Dbxref=GenBank:WP_001831361.1;Name=WP_001831361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831361.1;locus_tag=RM680_RS06350;product=DUF951 domain-containing protein;protein_id=WP_001831361.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	68138	69013	.	-	.	ID=gene-RM680_RS06355;Name=RM680_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06355;old_locus_tag=RM680_06355
NZ_JAVRJI010000006.1	Protein Homology	CDS	68138	69013	.	-	0	ID=cds-WP_002468622.1;Parent=gene-RM680_RS06355;Dbxref=GenBank:WP_002468622.1;Name=WP_002468622.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470460.1;locus_tag=RM680_RS06355;product=mechanosensitive ion channel family protein;protein_id=WP_002468622.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	69174	70016	.	-	.	ID=gene-RM680_RS06360;Name=RM680_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06360;old_locus_tag=RM680_06360
NZ_JAVRJI010000006.1	Protein Homology	CDS	69174	70016	.	-	0	ID=cds-WP_002486174.1;Parent=gene-RM680_RS06360;Dbxref=GenBank:WP_002486174.1;Name=WP_002486174.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437214.1;locus_tag=RM680_RS06360;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_002486174.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	70746	71849	.	+	.	ID=gene-RM680_RS06365;Name=RM680_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06365;old_locus_tag=RM680_06365
NZ_JAVRJI010000006.1	Protein Homology	CDS	70746	71849	.	+	0	ID=cds-WP_002486191.1;Parent=gene-RM680_RS06365;Dbxref=GenBank:WP_002486191.1;Name=WP_002486191.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486191.1;locus_tag=RM680_RS06365;product=PLP-dependent transferase;protein_id=WP_002486191.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	71846	73021	.	+	.	ID=gene-RM680_RS06370;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=RM680_RS06370;old_locus_tag=RM680_06370
NZ_JAVRJI010000006.1	Protein Homology	CDS	71846	73021	.	+	0	ID=cds-WP_002437219.1;Parent=gene-RM680_RS06370;Dbxref=GenBank:WP_002437219.1;Name=WP_002437219.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499194.1;locus_tag=RM680_RS06370;product=cystathionine beta-lyase MetC;protein_id=WP_002437219.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	72975	74813	.	+	.	ID=gene-RM680_RS06375;Name=RM680_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06375;old_locus_tag=RM680_06375
NZ_JAVRJI010000006.1	Protein Homology	CDS	72975	74813	.	+	0	ID=cds-WP_002437221.1;Parent=gene-RM680_RS06375;Dbxref=GenBank:WP_002437221.1;Name=WP_002437221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498929.1;locus_tag=RM680_RS06375;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WP_002437221.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	74810	77056	.	+	.	ID=gene-RM680_RS06380;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=RM680_RS06380;old_locus_tag=RM680_06380
NZ_JAVRJI010000006.1	Protein Homology	CDS	74810	77056	.	+	0	ID=cds-WP_002486187.1;Parent=gene-RM680_RS06380;Dbxref=GenBank:WP_002486187.1;Name=WP_002486187.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437223.1;locus_tag=RM680_RS06380;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_002486187.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	77078	77821	.	+	.	ID=gene-RM680_RS06385;Name=RM680_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06385;old_locus_tag=RM680_06385
NZ_JAVRJI010000006.1	Protein Homology	CDS	77078	77821	.	+	0	ID=cds-WP_001831362.1;Parent=gene-RM680_RS06385;Dbxref=GenBank:WP_001831362.1;Name=WP_001831362.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487128.1;locus_tag=RM680_RS06385;product=cyclase family protein;protein_id=WP_001831362.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	78039	79223	.	-	.	ID=gene-RM680_RS06390;Name=RM680_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06390;old_locus_tag=RM680_06390
NZ_JAVRJI010000006.1	Protein Homology	CDS	78039	79223	.	-	0	ID=cds-WP_001831350.1;Parent=gene-RM680_RS06390;Dbxref=GenBank:WP_001831350.1;Name=WP_001831350.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489335.1;locus_tag=RM680_RS06390;product=acetyl-CoA C-acetyltransferase;protein_id=WP_001831350.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	79239	79451	.	-	.	ID=gene-RM680_RS06395;Name=RM680_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06395;old_locus_tag=RM680_06395
NZ_JAVRJI010000006.1	Protein Homology	CDS	79239	79451	.	-	0	ID=cds-WP_002456823.1;Parent=gene-RM680_RS06395;Dbxref=GenBank:WP_002456823.1;Name=WP_002456823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456823.1;locus_tag=RM680_RS06395;product=hypothetical protein;protein_id=WP_002456823.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	80069	80269	.	-	.	ID=gene-RM680_RS06400;Name=RM680_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06400;old_locus_tag=RM680_06400
NZ_JAVRJI010000006.1	Protein Homology	CDS	80069	80269	.	-	0	ID=cds-WP_001831332.1;Parent=gene-RM680_RS06400;Dbxref=GenBank:WP_001831332.1;Name=WP_001831332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455913.1;locus_tag=RM680_RS06400;product=sterile alpha motif-like domain-containing protein;protein_id=WP_001831332.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	80555	80758	.	+	.	ID=gene-RM680_RS06405;Name=RM680_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06405;old_locus_tag=RM680_06405
NZ_JAVRJI010000006.1	Protein Homology	CDS	80555	80758	.	+	0	ID=cds-WP_001831346.1;Parent=gene-RM680_RS06405;Dbxref=GenBank:WP_001831346.1;Name=WP_001831346.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493858.1;locus_tag=RM680_RS06405;product=helix-turn-helix transcriptional regulator;protein_id=WP_001831346.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	80755	81489	.	+	.	ID=gene-RM680_RS06410;Name=RM680_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06410;old_locus_tag=RM680_06410
NZ_JAVRJI010000006.1	Protein Homology	CDS	80755	81489	.	+	0	ID=cds-WP_002437234.1;Parent=gene-RM680_RS06410;Dbxref=GenBank:WP_002437234.1;Name=WP_002437234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503280.1;locus_tag=RM680_RS06410;product=DUF3169 family protein;protein_id=WP_002437234.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	pseudogene	81517	81741	.	+	.	ID=gene-RM680_RS06415;Name=RM680_RS06415;end_range=81741,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS06415;old_locus_tag=RM680_06415;partial=true;pseudo=true
NZ_JAVRJI010000006.1	Protein Homology	CDS	81517	81741	.	+	0	ID=cds-RM680_RS06415;Parent=gene-RM680_RS06415;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;end_range=81741,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447667.1;locus_tag=RM680_RS06415;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	pseudogene	81736	81954	.	-	.	ID=gene-RM680_RS06420;Name=RM680_RS06420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS06420;old_locus_tag=RM680_06420;partial=true;pseudo=true;start_range=.,81736
NZ_JAVRJI010000006.1	Protein Homology	CDS	81736	81954	.	-	0	ID=cds-RM680_RS06420;Parent=gene-RM680_RS06420;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_216678631.1;locus_tag=RM680_RS06420;partial=true;product=YSIRK-type signal peptide-containing protein;pseudo=true;start_range=.,81736;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	83358	84722	.	+	.	ID=gene-RM680_RS06425;Name=RM680_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06425;old_locus_tag=RM680_06425
NZ_JAVRJI010000006.1	Protein Homology	CDS	83358	84722	.	+	0	ID=cds-WP_001831773.1;Parent=gene-RM680_RS06425;Dbxref=GenBank:WP_001831773.1;Name=WP_001831773.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489332.1;locus_tag=RM680_RS06425;product=MFS transporter;protein_id=WP_001831773.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	84784	85362	.	-	.	ID=gene-RM680_RS06430;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=RM680_RS06430;old_locus_tag=RM680_06430
NZ_JAVRJI010000006.1	Protein Homology	CDS	84784	85362	.	-	0	ID=cds-WP_001831808.1;Parent=gene-RM680_RS06430;Dbxref=GenBank:WP_001831808.1;Name=WP_001831808.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437258.1;locus_tag=RM680_RS06430;product=signal peptidase I;protein_id=WP_001831808.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	85428	86072	.	-	.	ID=gene-RM680_RS06435;Name=RM680_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06435;old_locus_tag=RM680_06435
NZ_JAVRJI010000006.1	Protein Homology	CDS	85428	86072	.	-	0	ID=cds-WP_002486180.1;Parent=gene-RM680_RS06435;Dbxref=GenBank:WP_002486180.1;Name=WP_002486180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470130.1;locus_tag=RM680_RS06435;product=hypothetical protein;protein_id=WP_002486180.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	86088	86468	.	-	.	ID=gene-RM680_RS06440;Name=RM680_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06440;old_locus_tag=RM680_06440
NZ_JAVRJI010000006.1	Protein Homology	CDS	86088	86468	.	-	0	ID=cds-WP_001831755.1;Parent=gene-RM680_RS06440;Dbxref=GenBank:WP_001831755.1;Name=WP_001831755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831755.1;locus_tag=RM680_RS06440;product=LptM family lipoprotein;protein_id=WP_001831755.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	86762	87520	.	+	.	ID=gene-RM680_RS06445;Name=RM680_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06445;old_locus_tag=RM680_06445
NZ_JAVRJI010000006.1	Protein Homology	CDS	86762	87520	.	+	0	ID=cds-WP_001831790.1;Parent=gene-RM680_RS06445;Dbxref=GenBank:WP_001831790.1;Name=WP_001831790.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831790.1;locus_tag=RM680_RS06445;product=ABC transporter ATP-binding protein;protein_id=WP_001831790.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	87510	89390	.	+	.	ID=gene-RM680_RS06450;Name=RM680_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06450;old_locus_tag=RM680_06450
NZ_JAVRJI010000006.1	Protein Homology	CDS	87510	89390	.	+	0	ID=cds-WP_001832519.1;Parent=gene-RM680_RS06450;Dbxref=GenBank:WP_001832519.1;Name=WP_001832519.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490219.1;locus_tag=RM680_RS06450;product=FtsX-like permease family protein;protein_id=WP_001832519.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	89435	89626	.	+	.	ID=gene-RM680_RS06455;Name=RM680_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06455;old_locus_tag=RM680_06455
NZ_JAVRJI010000006.1	Protein Homology	CDS	89435	89626	.	+	0	ID=cds-WP_001831751.1;Parent=gene-RM680_RS06455;Dbxref=GenBank:WP_001831751.1;Name=WP_001831751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447657.1;locus_tag=RM680_RS06455;product=VraH family peptide resistance protein;protein_id=WP_001831751.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	89698	91743	.	-	.	ID=gene-RM680_RS06460;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=RM680_RS06460;old_locus_tag=RM680_06460
NZ_JAVRJI010000006.1	Protein Homology	CDS	89698	91743	.	-	0	ID=cds-WP_002470516.1;Parent=gene-RM680_RS06460;Dbxref=GenBank:WP_002470516.1;Name=WP_002470516.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489777.1;locus_tag=RM680_RS06460;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_002470516.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	92741	93937	.	-	.	ID=gene-RM680_RS06465;Name=RM680_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06465;old_locus_tag=RM680_06465
NZ_JAVRJI010000006.1	Protein Homology	CDS	92741	93937	.	-	0	ID=cds-WP_001831769.1;Parent=gene-RM680_RS06465;Dbxref=GenBank:WP_001831769.1;Name=WP_001831769.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497469.1;locus_tag=RM680_RS06465;product=ABC transporter permease;protein_id=WP_001831769.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	93930	94616	.	-	.	ID=gene-RM680_RS06470;Name=RM680_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06470;old_locus_tag=RM680_06470
NZ_JAVRJI010000006.1	Protein Homology	CDS	93930	94616	.	-	0	ID=cds-WP_001831756.1;Parent=gene-RM680_RS06470;Dbxref=GenBank:WP_001831756.1;Name=WP_001831756.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468936.1;locus_tag=RM680_RS06470;product=ABC transporter ATP-binding protein;protein_id=WP_001831756.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	94613	95731	.	-	.	ID=gene-RM680_RS06475;Name=RM680_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06475;old_locus_tag=RM680_06475
NZ_JAVRJI010000006.1	Protein Homology	CDS	94613	95731	.	-	0	ID=cds-WP_001831820.1;Parent=gene-RM680_RS06475;Dbxref=GenBank:WP_001831820.1;Name=WP_001831820.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831820.1;locus_tag=RM680_RS06475;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_001831820.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	95969	96598	.	+	.	ID=gene-RM680_RS06480;Name=RM680_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06480;old_locus_tag=RM680_06480
NZ_JAVRJI010000006.1	Protein Homology	CDS	95969	96598	.	+	0	ID=cds-WP_002486168.1;Parent=gene-RM680_RS06480;Dbxref=GenBank:WP_002486168.1;Name=WP_002486168.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489054.1;locus_tag=RM680_RS06480;product=YIP1 family protein;protein_id=WP_002486168.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	96786	97355	.	-	.	ID=gene-RM680_RS06485;Name=RM680_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06485;old_locus_tag=RM680_06485
NZ_JAVRJI010000006.1	Protein Homology	CDS	96786	97355	.	-	0	ID=cds-WP_002456812.1;Parent=gene-RM680_RS06485;Dbxref=GenBank:WP_002456812.1;Name=WP_002456812.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366353.1;locus_tag=RM680_RS06485;product=helix-turn-helix transcriptional regulator;protein_id=WP_002456812.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	97575	98114	.	-	.	ID=gene-RM680_RS06490;Name=RM680_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06490;old_locus_tag=RM680_06490
NZ_JAVRJI010000006.1	Protein Homology	CDS	97575	98114	.	-	0	ID=cds-WP_001831797.1;Parent=gene-RM680_RS06490;Dbxref=GenBank:WP_001831797.1;Name=WP_001831797.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490035.1;locus_tag=RM680_RS06490;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001831797.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	98080	98475	.	-	.	ID=gene-RM680_RS06495;Name=RM680_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06495;old_locus_tag=RM680_06495
NZ_JAVRJI010000006.1	Protein Homology	CDS	98080	98475	.	-	0	ID=cds-WP_001831775.1;Parent=gene-RM680_RS06495;Dbxref=GenBank:WP_001831775.1;Name=WP_001831775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502257.1;locus_tag=RM680_RS06495;product=DUF3147 family protein;protein_id=WP_001831775.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	98491	98850	.	-	.	ID=gene-RM680_RS06500;Name=RM680_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06500;old_locus_tag=RM680_06500
NZ_JAVRJI010000006.1	Protein Homology	CDS	98491	98850	.	-	0	ID=cds-WP_001831810.1;Parent=gene-RM680_RS06500;Dbxref=GenBank:WP_001831810.1;Name=WP_001831810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831810.1;locus_tag=RM680_RS06500;product=DUF3147 family protein;protein_id=WP_001831810.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	99251	100090	.	-	.	ID=gene-RM680_RS06505;Name=noc;gbkey=Gene;gene=noc;gene_biotype=protein_coding;locus_tag=RM680_RS06505;old_locus_tag=RM680_06505
NZ_JAVRJI010000006.1	Protein Homology	CDS	99251	100090	.	-	0	ID=cds-WP_001831794.1;Parent=gene-RM680_RS06505;Dbxref=GenBank:WP_001831794.1;Name=WP_001831794.1;Ontology_term=GO:0032466,GO:0043565;gbkey=CDS;gene=noc;go_function=sequence-specific DNA binding|0043565||IEA;go_process=negative regulation of cytokinesis|0032466||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501495.1;locus_tag=RM680_RS06505;product=nucleoid occlusion protein;protein_id=WP_001831794.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	100134	100853	.	-	.	ID=gene-RM680_RS06510;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=RM680_RS06510;old_locus_tag=RM680_06510
NZ_JAVRJI010000006.1	Protein Homology	CDS	100134	100853	.	-	0	ID=cds-WP_001831748.1;Parent=gene-RM680_RS06510;Dbxref=GenBank:WP_001831748.1;Name=WP_001831748.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468576.1;locus_tag=RM680_RS06510;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_001831748.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	100853	102730	.	-	.	ID=gene-RM680_RS06515;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=RM680_RS06515;old_locus_tag=RM680_06515
NZ_JAVRJI010000006.1	Protein Homology	CDS	100853	102730	.	-	0	ID=cds-WP_002456811.1;Parent=gene-RM680_RS06515;Dbxref=GenBank:WP_002456811.1;Name=WP_002456811.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499187.1;locus_tag=RM680_RS06515;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_002456811.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	102803	104182	.	-	.	ID=gene-RM680_RS06520;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=RM680_RS06520;old_locus_tag=RM680_06520
NZ_JAVRJI010000006.1	Protein Homology	CDS	102803	104182	.	-	0	ID=cds-WP_001831768.1;Parent=gene-RM680_RS06520;Dbxref=GenBank:WP_001831768.1;Name=WP_001831768.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501498.1;locus_tag=RM680_RS06520;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_001831768.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	104328	104675	.	-	.	ID=gene-RM680_RS06525;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=RM680_RS06525;old_locus_tag=RM680_06525
NZ_JAVRJI010000006.1	Protein Homology	CDS	104328	104675	.	-	0	ID=cds-WP_001832522.1;Parent=gene-RM680_RS06525;Dbxref=GenBank:WP_001832522.1;Name=WP_001832522.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636722.1;locus_tag=RM680_RS06525;product=ribonuclease P protein component;protein_id=WP_001832522.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	104834	104971	.	-	.	ID=gene-RM680_RS06530;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=RM680_RS06530;old_locus_tag=RM680_06530
NZ_JAVRJI010000006.1	Protein Homology	CDS	104834	104971	.	-	0	ID=cds-WP_000240855.1;Parent=gene-RM680_RS06530;Dbxref=GenBank:WP_000240855.1;Name=WP_000240855.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1;locus_tag=RM680_RS06530;product=50S ribosomal protein L34;protein_id=WP_000240855.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	105710	107065	.	+	.	ID=gene-RM680_RS06535;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=RM680_RS06535;old_locus_tag=RM680_06535
NZ_JAVRJI010000006.1	Protein Homology	CDS	105710	107065	.	+	0	ID=cds-WP_002468943.1;Parent=gene-RM680_RS06535;Dbxref=GenBank:WP_002468943.1;Name=WP_002468943.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898446.1;locus_tag=RM680_RS06535;product=chromosomal replication initiator protein DnaA;protein_id=WP_002468943.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	107374	108507	.	+	.	ID=gene-RM680_RS06540;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=RM680_RS06540;old_locus_tag=RM680_06540
NZ_JAVRJI010000006.1	Protein Homology	CDS	107374	108507	.	+	0	ID=cds-WP_001831813.1;Parent=gene-RM680_RS06540;Dbxref=GenBank:WP_001831813.1;Name=WP_001831813.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969809.1;locus_tag=RM680_RS06540;product=DNA polymerase III subunit beta;protein_id=WP_001831813.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	108940	109176	.	+	.	ID=gene-RM680_RS06545;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=RM680_RS06545;old_locus_tag=RM680_06545
NZ_JAVRJI010000006.1	Protein Homology	CDS	108940	109176	.	+	0	ID=cds-WP_001831806.1;Parent=gene-RM680_RS06545;Dbxref=GenBank:WP_001831806.1;Name=WP_001831806.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yaaA;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000249646.1;locus_tag=RM680_RS06545;product=S4 domain-containing protein YaaA;protein_id=WP_001831806.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	109173	110288	.	+	.	ID=gene-RM680_RS06550;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=RM680_RS06550;old_locus_tag=RM680_06550
NZ_JAVRJI010000006.1	Protein Homology	CDS	109173	110288	.	+	0	ID=cds-WP_002437307.1;Parent=gene-RM680_RS06550;Dbxref=GenBank:WP_002437307.1;Name=WP_002437307.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498612.1;locus_tag=RM680_RS06550;product=DNA replication/repair protein RecF;protein_id=WP_002437307.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	110299	112230	.	+	.	ID=gene-RM680_RS06555;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=RM680_RS06555;old_locus_tag=RM680_06555
NZ_JAVRJI010000006.1	Protein Homology	CDS	110299	112230	.	+	0	ID=cds-WP_001831817.1;Parent=gene-RM680_RS06555;Dbxref=GenBank:WP_001831817.1;Name=WP_001831817.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498613.1;locus_tag=RM680_RS06555;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_001831817.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	112267	114948	.	+	.	ID=gene-RM680_RS06560;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=RM680_RS06560;old_locus_tag=RM680_06560
NZ_JAVRJI010000006.1	Protein Homology	CDS	112267	114948	.	+	0	ID=cds-WP_001831812.1;Parent=gene-RM680_RS06560;Dbxref=GenBank:WP_001831812.1;Name=WP_001831812.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501915.1;locus_tag=RM680_RS06560;product=DNA gyrase subunit A;protein_id=WP_001831812.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	115340	116155	.	-	.	ID=gene-RM680_RS06565;Name=RM680_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06565;old_locus_tag=RM680_06565
NZ_JAVRJI010000006.1	Protein Homology	CDS	115340	116155	.	-	0	ID=cds-WP_001831762.1;Parent=gene-RM680_RS06565;Dbxref=GenBank:WP_001831762.1;Name=WP_001831762.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366604.1;locus_tag=RM680_RS06565;product=NAD(P)H-hydrate dehydratase;protein_id=WP_001831762.1;transl_table=11
NZ_JAVRJI010000006.1	cmsearch	binding_site	116697	116912	.	+	.	ID=id-NZ_JAVRJI010000006.1:116697..116912;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_JAVRJI010000006.1	RefSeq	gene	117000	118286	.	+	.	ID=gene-RM680_RS06570;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=RM680_RS06570;old_locus_tag=RM680_06570
NZ_JAVRJI010000006.1	Protein Homology	CDS	117000	118286	.	+	0	ID=cds-WP_002485584.1;Parent=gene-RM680_RS06570;Dbxref=GenBank:WP_002485584.1;Name=WP_002485584.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498617.1;locus_tag=RM680_RS06570;product=serine--tRNA ligase;protein_id=WP_002485584.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	118814	119797	.	-	.	ID=gene-RM680_RS06575;Name=sph;gbkey=Gene;gene=sph;gene_biotype=protein_coding;locus_tag=RM680_RS06575;old_locus_tag=RM680_06575
NZ_JAVRJI010000006.1	Protein Homology	CDS	118814	119797	.	-	0	ID=cds-WP_311563528.1;Parent=gene-RM680_RS06575;Dbxref=GenBank:WP_311563528.1;Name=WP_311563528.1;Ontology_term=GO:0004767;gbkey=CDS;gene=sph;go_function=sphingomyelin phosphodiesterase activity|0004767||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831803.1;locus_tag=RM680_RS06575;product=sphingomyelin phosphodiesterase;protein_id=WP_311563528.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	120181	120873	.	+	.	ID=gene-RM680_RS06580;Name=RM680_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06580;old_locus_tag=RM680_06580
NZ_JAVRJI010000006.1	Protein Homology	CDS	120181	120873	.	+	0	ID=cds-WP_002470522.1;Parent=gene-RM680_RS06580;Dbxref=GenBank:WP_002470522.1;Name=WP_002470522.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499825.1;locus_tag=RM680_RS06580;product=AzlC family ABC transporter permease;protein_id=WP_002470522.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	120870	121199	.	+	.	ID=gene-RM680_RS06585;Name=RM680_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06585;old_locus_tag=RM680_06585
NZ_JAVRJI010000006.1	Protein Homology	CDS	120870	121199	.	+	0	ID=cds-WP_002470530.1;Parent=gene-RM680_RS06585;Dbxref=GenBank:WP_002470530.1;Name=WP_002470530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496077.1;locus_tag=RM680_RS06585;product=AzlD domain-containing protein;protein_id=WP_002470530.1;transl_table=11
NZ_JAVRJI010000006.1	cmsearch	riboswitch	121323	121423	.	+	.	ID=id-NZ_JAVRJI010000006.1:121323..121423;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000006.1	RefSeq	gene	121488	122456	.	+	.	ID=gene-RM680_RS06590;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=RM680_RS06590;old_locus_tag=RM680_06590
NZ_JAVRJI010000006.1	Protein Homology	CDS	121488	122456	.	+	0	ID=cds-WP_001831747.1;Parent=gene-RM680_RS06590;Dbxref=GenBank:WP_001831747.1;Name=WP_001831747.1;Ontology_term=GO:0009086,GO:0004414;gbkey=CDS;gene=metX;go_function=homoserine O-acetyltransferase activity|0004414||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498620.1;locus_tag=RM680_RS06590;product=homoserine O-acetyltransferase MetX;protein_id=WP_001831747.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	122705	123631	.	+	.	ID=gene-RM680_RS06595;Name=RM680_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06595;old_locus_tag=RM680_06595
NZ_JAVRJI010000006.1	Protein Homology	CDS	122705	123631	.	+	0	ID=cds-WP_002494609.1;Parent=gene-RM680_RS06595;Dbxref=GenBank:WP_002494609.1;Name=WP_002494609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437319.1;locus_tag=RM680_RS06595;product=YybS family protein;protein_id=WP_002494609.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	123660	125627	.	+	.	ID=gene-RM680_RS06600;Name=RM680_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06600;old_locus_tag=RM680_06600
NZ_JAVRJI010000006.1	Protein Homology	CDS	123660	125627	.	+	0	ID=cds-WP_002470520.1;Parent=gene-RM680_RS06600;Dbxref=GenBank:WP_002470520.1;Name=WP_002470520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498622.1;locus_tag=RM680_RS06600;product=DHH family phosphoesterase;protein_id=WP_002470520.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	125624	126070	.	+	.	ID=gene-RM680_RS06605;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=RM680_RS06605;old_locus_tag=RM680_06605
NZ_JAVRJI010000006.1	Protein Homology	CDS	125624	126070	.	+	0	ID=cds-WP_311563529.1;Parent=gene-RM680_RS06605;Dbxref=GenBank:WP_311563529.1;Name=WP_311563529.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498623.1;locus_tag=RM680_RS06605;product=50S ribosomal protein L9;protein_id=WP_311563529.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	126241	127641	.	+	.	ID=gene-RM680_RS06610;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=RM680_RS06610;old_locus_tag=RM680_06610
NZ_JAVRJI010000006.1	Protein Homology	CDS	126241	127641	.	+	0	ID=cds-WP_001831779.1;Parent=gene-RM680_RS06610;Dbxref=GenBank:WP_001831779.1;Name=WP_001831779.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831779.1;locus_tag=RM680_RS06610;product=replicative DNA helicase;protein_id=WP_001831779.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	127920	129203	.	+	.	ID=gene-RM680_RS06615;Name=RM680_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06615;old_locus_tag=RM680_06615
NZ_JAVRJI010000006.1	Protein Homology	CDS	127920	129203	.	+	0	ID=cds-WP_002455931.1;Parent=gene-RM680_RS06615;Dbxref=GenBank:WP_002455931.1;Name=WP_002455931.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498625.1;locus_tag=RM680_RS06615;product=adenylosuccinate synthase;protein_id=WP_002455931.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	129627	129701	.	+	.	ID=gene-RM680_RS06620;Name=RM680_RS06620;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS06620;old_locus_tag=RM680_06620
NZ_JAVRJI010000006.1	tRNAscan-SE	tRNA	129627	129701	.	+	.	ID=rna-RM680_RS06620;Parent=gene-RM680_RS06620;anticodon=(pos:129660..129662);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS06620;product=tRNA-Glu
NZ_JAVRJI010000006.1	tRNAscan-SE	exon	129627	129701	.	+	.	ID=exon-RM680_RS06620-1;Parent=rna-RM680_RS06620;anticodon=(pos:129660..129662);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS06620;product=tRNA-Glu
NZ_JAVRJI010000006.1	RefSeq	gene	129707	129779	.	+	.	ID=gene-RM680_RS06625;Name=RM680_RS06625;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS06625;old_locus_tag=RM680_06625
NZ_JAVRJI010000006.1	tRNAscan-SE	tRNA	129707	129779	.	+	.	ID=rna-RM680_RS06625;Parent=gene-RM680_RS06625;anticodon=(pos:129740..129742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS06625;product=tRNA-Asp
NZ_JAVRJI010000006.1	tRNAscan-SE	exon	129707	129779	.	+	.	ID=exon-RM680_RS06625-1;Parent=rna-RM680_RS06625;anticodon=(pos:129740..129742);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS06625;product=tRNA-Asp
NZ_JAVRJI010000006.1	RefSeq	gene	130256	130957	.	+	.	ID=gene-RM680_RS06630;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=RM680_RS06630;old_locus_tag=RM680_06630
NZ_JAVRJI010000006.1	Protein Homology	CDS	130256	130957	.	+	0	ID=cds-WP_001831816.1;Parent=gene-RM680_RS06630;Dbxref=GenBank:WP_001831816.1;Name=WP_001831816.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498626.1;locus_tag=RM680_RS06630;product=response regulator YycF;protein_id=WP_001831816.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	130970	132802	.	+	.	ID=gene-RM680_RS06635;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;gene_synonym=yycG;locus_tag=RM680_RS06635;old_locus_tag=RM680_06635
NZ_JAVRJI010000006.1	Protein Homology	CDS	130970	132802	.	+	0	ID=cds-WP_002437327.1;Parent=gene-RM680_RS06635;Dbxref=GenBank:WP_002437327.1;Name=WP_002437327.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=walK;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498627.1;locus_tag=RM680_RS06635;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_002437327.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	132795	134132	.	+	.	ID=gene-RM680_RS06640;Name=RM680_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06640;old_locus_tag=RM680_06640
NZ_JAVRJI010000006.1	Protein Homology	CDS	132795	134132	.	+	0	ID=cds-WP_002487825.1;Parent=gene-RM680_RS06640;Dbxref=GenBank:WP_002487825.1;Name=WP_002487825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447630.1;locus_tag=RM680_RS06640;product=YycH family regulatory protein;protein_id=WP_002487825.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	134133	134924	.	+	.	ID=gene-RM680_RS06645;Name=RM680_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06645;old_locus_tag=RM680_06645
NZ_JAVRJI010000006.1	Protein Homology	CDS	134133	134924	.	+	0	ID=cds-WP_002467996.1;Parent=gene-RM680_RS06645;Dbxref=GenBank:WP_002467996.1;Name=WP_002467996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494243.1;locus_tag=RM680_RS06645;product=two-component system regulatory protein YycI;protein_id=WP_002467996.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	135545	136345	.	+	.	ID=gene-RM680_RS06650;Name=RM680_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06650;old_locus_tag=RM680_06650
NZ_JAVRJI010000006.1	Protein Homology	CDS	135545	136345	.	+	0	ID=cds-WP_002447628.1;Parent=gene-RM680_RS06650;Dbxref=GenBank:WP_002447628.1;Name=WP_002447628.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498630.1;locus_tag=RM680_RS06650;product=MBL fold metallo-hydrolase;protein_id=WP_002447628.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	137400	137879	.	+	.	ID=gene-RM680_RS06655;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=RM680_RS06655;old_locus_tag=RM680_06655
NZ_JAVRJI010000006.1	Protein Homology	CDS	137400	137879	.	+	0	ID=cds-WP_002458513.1;Parent=gene-RM680_RS06655;Dbxref=GenBank:WP_002458513.1;Name=WP_002458513.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363758.1;locus_tag=RM680_RS06655;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_002458513.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	pseudogene	138029	139719	.	+	.	ID=gene-RM680_RS06660;Name=RM680_RS06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS06660;old_locus_tag=RM680_06660;pseudo=true
NZ_JAVRJI010000006.1	Protein Homology	CDS	138029	139719	.	+	0	ID=cds-RM680_RS06660;Parent=gene-RM680_RS06660;Note=frameshifted;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489469.1;locus_tag=RM680_RS06660;product=DNA methyltransferase;pseudo=true;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	139722	142274	.	+	.	ID=gene-RM680_RS06665;Name=RM680_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06665;old_locus_tag=RM680_06665
NZ_JAVRJI010000006.1	Protein Homology	CDS	139722	142274	.	+	0	ID=cds-WP_002489471.1;Parent=gene-RM680_RS06665;Dbxref=GenBank:WP_002489471.1;Name=WP_002489471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489471.1;locus_tag=RM680_RS06665;product=DEAD/DEAH box helicase family protein;protein_id=WP_002489471.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	142566	143063	.	-	.	ID=gene-RM680_RS06670;Name=RM680_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06670;old_locus_tag=RM680_06670
NZ_JAVRJI010000006.1	Protein Homology	CDS	142566	143063	.	-	0	ID=cds-WP_001832435.1;Parent=gene-RM680_RS06670;Dbxref=GenBank:WP_001832435.1;Name=WP_001832435.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656763.1;locus_tag=RM680_RS06670;product=GNAT family N-acetyltransferase;protein_id=WP_001832435.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	143341	143562	.	-	.	ID=gene-RM680_RS06675;Name=RM680_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06675;old_locus_tag=RM680_06675
NZ_JAVRJI010000006.1	Protein Homology	CDS	143341	143562	.	-	0	ID=cds-WP_001832432.1;Parent=gene-RM680_RS06675;Dbxref=GenBank:WP_001832432.1;Name=WP_001832432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832432.1;locus_tag=RM680_RS06675;product=hypothetical protein;protein_id=WP_001832432.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	143576	144079	.	-	.	ID=gene-RM680_RS06680;Name=RM680_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06680;old_locus_tag=RM680_06680
NZ_JAVRJI010000006.1	Protein Homology	CDS	143576	144079	.	-	0	ID=cds-WP_001832439.1;Parent=gene-RM680_RS06680;Dbxref=GenBank:WP_001832439.1;Name=WP_001832439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012086592.1;locus_tag=RM680_RS06680;product=DUF1643 domain-containing protein;protein_id=WP_001832439.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	pseudogene	144095	144229	.	-	.	ID=gene-RM680_RS12045;Name=RM680_RS12045;end_range=144229,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS12045;old_locus_tag=RM680_06685;partial=true;pseudo=true
NZ_JAVRJI010000006.1	Protein Homology	CDS	144095	144229	.	-	0	ID=cds-RM680_RS12045;Parent=gene-RM680_RS12045;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=144229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505017.1;locus_tag=RM680_RS12045;partial=true;product=DUF960 family protein;pseudo=true;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	144505	145467	.	+	.	ID=gene-RM680_RS06685;Name=RM680_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06685;old_locus_tag=RM680_06690
NZ_JAVRJI010000006.1	Protein Homology	CDS	144505	145467	.	+	0	ID=cds-WP_311563530.1;Parent=gene-RM680_RS06685;Dbxref=GenBank:WP_311563530.1;Name=WP_311563530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832443.1;locus_tag=RM680_RS06685;product=zinc ribbon domain-containing protein;protein_id=WP_311563530.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	145977	146471	.	+	.	ID=gene-RM680_RS06690;Name=RM680_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06690;old_locus_tag=RM680_06695
NZ_JAVRJI010000006.1	Protein Homology	CDS	145977	146471	.	+	0	ID=cds-WP_001830713.1;Parent=gene-RM680_RS06690;Dbxref=GenBank:WP_001830713.1;Name=WP_001830713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830713.1;locus_tag=RM680_RS06690;product=SEFIR domain-containing protein;protein_id=WP_001830713.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	146468	146896	.	+	.	ID=gene-RM680_RS06695;Name=RM680_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06695;old_locus_tag=RM680_06700
NZ_JAVRJI010000006.1	Protein Homology	CDS	146468	146896	.	+	0	ID=cds-WP_002494871.1;Parent=gene-RM680_RS06695;Dbxref=GenBank:WP_002494871.1;Name=WP_002494871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494871.1;locus_tag=RM680_RS06695;product=hypothetical protein;protein_id=WP_002494871.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	pseudogene	146968	147365	.	+	.	ID=gene-RM680_RS06700;Name=RM680_RS06700;end_range=147365,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS06700;old_locus_tag=RM680_06705;partial=true;pseudo=true
NZ_JAVRJI010000006.1	Protein Homology	CDS	146968	147365	.	+	0	ID=cds-RM680_RS06700;Parent=gene-RM680_RS06700;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=147365,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039632.5;locus_tag=RM680_RS06700;partial=true;product=DUF6038 family protein;pseudo=true;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	147345	147959	.	+	.	ID=gene-RM680_RS06705;Name=RM680_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06705;old_locus_tag=RM680_06710
NZ_JAVRJI010000006.1	Protein Homology	CDS	147345	147959	.	+	0	ID=cds-WP_001830696.1;Parent=gene-RM680_RS06705;Dbxref=GenBank:WP_001830696.1;Name=WP_001830696.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039632.5;locus_tag=RM680_RS06705;product=DUF6038 family protein;protein_id=WP_001830696.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	148565	148720	.	+	.	ID=gene-RM680_RS06710;Name=RM680_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06710;old_locus_tag=RM680_06715
NZ_JAVRJI010000006.1	Protein Homology	CDS	148565	148720	.	+	0	ID=cds-WP_001830703.1;Parent=gene-RM680_RS06710;Dbxref=GenBank:WP_001830703.1;Name=WP_001830703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830703.1;locus_tag=RM680_RS06710;product=hypothetical protein;protein_id=WP_001830703.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	pseudogene	148750	149421	.	+	.	ID=gene-RM680_RS06715;Name=RM680_RS06715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS06715;old_locus_tag=RM680_06720;pseudo=true
NZ_JAVRJI010000006.1	Protein Homology	CDS	148750	149421	.	+	0	ID=cds-RM680_RS06715;Parent=gene-RM680_RS06715;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM680_RS06715;product=IS6 family transposase;pseudo=true;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	149506	149571	.	-	.	ID=gene-RM680_RS11985;Name=RM680_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11985
NZ_JAVRJI010000006.1	Protein Homology	CDS	149506	149571	.	-	0	ID=cds-WP_099797811.1;Parent=gene-RM680_RS11985;Dbxref=GenBank:WP_099797811.1;Name=WP_099797811.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033428.5;locus_tag=RM680_RS11985;product=epsilon family phenol-soluble modulin;protein_id=WP_099797811.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	150026	150739	.	-	.	ID=gene-RM680_RS06720;Name=RM680_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06720;old_locus_tag=RM680_06725
NZ_JAVRJI010000006.1	Protein Homology	CDS	150026	150739	.	-	0	ID=cds-WP_001830710.1;Parent=gene-RM680_RS06720;Dbxref=GenBank:WP_001830710.1;Name=WP_001830710.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830710.1;locus_tag=RM680_RS06720;product=response regulator transcription factor;protein_id=WP_001830710.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	150744	153398	.	-	.	ID=gene-RM680_RS06725;Name=RM680_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06725;old_locus_tag=RM680_06730
NZ_JAVRJI010000006.1	Protein Homology	CDS	150744	153398	.	-	0	ID=cds-WP_311563531.1;Parent=gene-RM680_RS06725;Dbxref=GenBank:WP_311563531.1;Name=WP_311563531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898477.1;locus_tag=RM680_RS06725;product=sensor histidine kinase KdpD;protein_id=WP_311563531.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	153565	153645	.	+	.	ID=gene-RM680_RS06730;Name=RM680_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06730;old_locus_tag=RM680_06735
NZ_JAVRJI010000006.1	Protein Homology	CDS	153565	153645	.	+	0	ID=cds-WP_001830720.1;Parent=gene-RM680_RS06730;Dbxref=GenBank:WP_001830720.1;Name=WP_001830720.1;Ontology_term=GO:0043462,GO:0008556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830720.1;locus_tag=RM680_RS06730;product=potassium-transporting ATPase subunit F;protein_id=WP_001830720.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	153666	155348	.	+	.	ID=gene-RM680_RS06735;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=RM680_RS06735;old_locus_tag=RM680_06740
NZ_JAVRJI010000006.1	Protein Homology	CDS	153666	155348	.	+	0	ID=cds-WP_002494283.1;Parent=gene-RM680_RS06735;Dbxref=GenBank:WP_002494283.1;Name=WP_002494283.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494283.1;locus_tag=RM680_RS06735;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_002494283.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	155367	157388	.	+	.	ID=gene-RM680_RS06740;Name=RM680_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06740;old_locus_tag=RM680_06745
NZ_JAVRJI010000006.1	Protein Homology	CDS	155367	157388	.	+	0	ID=cds-WP_032604071.1;Parent=gene-RM680_RS06740;Dbxref=GenBank:WP_032604071.1;Name=WP_032604071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000852430.1;locus_tag=RM680_RS06740;product=K(+)-transporting ATPase subunit B;protein_id=WP_032604071.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	157403	157963	.	+	.	ID=gene-RM680_RS06745;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=RM680_RS06745;old_locus_tag=RM680_06750
NZ_JAVRJI010000006.1	Protein Homology	CDS	157403	157963	.	+	0	ID=cds-WP_001830712.1;Parent=gene-RM680_RS06745;Dbxref=GenBank:WP_001830712.1;Name=WP_001830712.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpC;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830712.1;locus_tag=RM680_RS06745;product=K(+)-transporting ATPase subunit C;protein_id=WP_001830712.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	158272	158613	.	-	.	ID=gene-RM680_RS06750;Name=RM680_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06750;old_locus_tag=RM680_06755
NZ_JAVRJI010000006.1	Protein Homology	CDS	158272	158613	.	-	0	ID=cds-WP_001830719.1;Parent=gene-RM680_RS06750;Dbxref=GenBank:WP_001830719.1;Name=WP_001830719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830719.1;locus_tag=RM680_RS06750;product=hypothetical protein;protein_id=WP_001830719.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	pseudogene	158927	159310	.	+	.	ID=gene-RM680_RS06755;Name=RM680_RS06755;end_range=159310,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS06755;old_locus_tag=RM680_06760;partial=true;pseudo=true
NZ_JAVRJI010000006.1	Protein Homology	CDS	158927	159310	.	+	0	ID=cds-RM680_RS06755;Parent=gene-RM680_RS06755;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=159310,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368392.1;locus_tag=RM680_RS06755;partial=true;product=histidine racemase CntK;pseudo=true;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	159519	160379	.	+	.	ID=gene-RM680_RS06760;Name=RM680_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06760;old_locus_tag=RM680_06765
NZ_JAVRJI010000006.1	Protein Homology	CDS	159519	160379	.	+	0	ID=cds-WP_186331246.1;Parent=gene-RM680_RS06760;Dbxref=GenBank:WP_186331246.1;Name=WP_186331246.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558285.1;locus_tag=RM680_RS06760;product=IS3 family transposase;protein_id=WP_186331246.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	160479	161408	.	-	.	ID=gene-RM680_RS06765;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=RM680_RS06765;old_locus_tag=RM680_06770
NZ_JAVRJI010000006.1	Protein Homology	CDS	160479	161408	.	-	0	ID=cds-WP_000036757.1;Parent=gene-RM680_RS06765;Dbxref=GenBank:WP_000036757.1;Name=WP_000036757.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498813.1;locus_tag=RM680_RS06765;product=carbamate kinase;protein_id=WP_000036757.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	161428	162426	.	-	.	ID=gene-RM680_RS06770;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=RM680_RS06770;old_locus_tag=RM680_06775
NZ_JAVRJI010000006.1	Protein Homology	CDS	161428	162426	.	-	0	ID=cds-WP_020368050.1;Parent=gene-RM680_RS06770;Dbxref=GenBank:WP_020368050.1;Name=WP_020368050.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452600.1;locus_tag=RM680_RS06770;product=ornithine carbamoyltransferase;protein_id=WP_020368050.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	162464	163153	.	-	.	ID=gene-RM680_RS06775;Name=RM680_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06775;old_locus_tag=RM680_06780
NZ_JAVRJI010000006.1	Protein Homology	CDS	162464	163153	.	-	0	ID=cds-WP_020368049.1;Parent=gene-RM680_RS06775;Dbxref=GenBank:WP_020368049.1;Name=WP_020368049.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485352.1;locus_tag=RM680_RS06775;product=Crp/Fnr family transcriptional regulator;protein_id=WP_020368049.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	163195	164616	.	-	.	ID=gene-RM680_RS06780;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=RM680_RS06780;old_locus_tag=RM680_06785
NZ_JAVRJI010000006.1	Protein Homology	CDS	163195	164616	.	-	0	ID=cds-WP_000344142.1;Parent=gene-RM680_RS06780;Dbxref=GenBank:WP_000344142.1;Name=WP_000344142.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000344142.1;locus_tag=RM680_RS06780;product=arginine-ornithine antiporter;protein_id=WP_000344142.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	164702	165937	.	-	.	ID=gene-RM680_RS06785;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=RM680_RS06785;old_locus_tag=RM680_06790
NZ_JAVRJI010000006.1	Protein Homology	CDS	164702	165937	.	-	0	ID=cds-WP_000249804.1;Parent=gene-RM680_RS06785;Dbxref=GenBank:WP_000249804.1;Name=WP_000249804.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501419.1;locus_tag=RM680_RS06785;product=arginine deiminase;protein_id=WP_000249804.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	166206	166652	.	-	.	ID=gene-RM680_RS06790;Name=RM680_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06790;old_locus_tag=RM680_06795
NZ_JAVRJI010000006.1	Protein Homology	CDS	166206	166652	.	-	0	ID=cds-WP_000711815.1;Parent=gene-RM680_RS06790;Dbxref=GenBank:WP_000711815.1;Name=WP_000711815.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000711814.1;locus_tag=RM680_RS06790;product=arginine repressor;protein_id=WP_000711815.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	pseudogene	167357	168005	.	+	.	ID=gene-RM680_RS06795;Name=RM680_RS06795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS06795;old_locus_tag=RM680_06800;partial=true;pseudo=true;start_range=.,167357
NZ_JAVRJI010000006.1	Protein Homology	CDS	167357	168005	.	+	0	ID=cds-RM680_RS06795;Parent=gene-RM680_RS06795;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505894.1;locus_tag=RM680_RS06795;partial=true;product=type I restriction enzyme endonuclease domain-containing protein;pseudo=true;start_range=.,167357;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	168276	168707	.	-	.	ID=gene-RM680_RS06800;Name=RM680_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06800;old_locus_tag=RM680_06805
NZ_JAVRJI010000006.1	Protein Homology	CDS	168276	168707	.	-	0	ID=cds-WP_000475804.1;Parent=gene-RM680_RS06800;Dbxref=GenBank:WP_000475804.1;Name=WP_000475804.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475805.1;locus_tag=RM680_RS06800;product=universal stress protein;protein_id=WP_000475804.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	169589	169915	.	-	.	ID=gene-RM680_RS06805;Name=RM680_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06805;old_locus_tag=RM680_06810
NZ_JAVRJI010000006.1	Protein Homology	CDS	169589	169915	.	-	0	ID=cds-WP_311563532.1;Parent=gene-RM680_RS06805;Dbxref=GenBank:WP_311563532.1;Name=WP_311563532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000916431.1;locus_tag=RM680_RS06805;product=replication initiation protein;protein_id=WP_311563532.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	169931	170605	.	+	.	ID=gene-RM680_RS06810;Name=RM680_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06810;old_locus_tag=RM680_06815
NZ_JAVRJI010000006.1	Protein Homology	CDS	169931	170605	.	+	0	ID=cds-WP_001106065.1;Parent=gene-RM680_RS06810;Dbxref=GenBank:WP_001106065.1;Name=WP_001106065.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM680_RS06810;product=IS6 family transposase;protein_id=WP_001106065.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	171025	171798	.	+	.	ID=gene-RM680_RS06815;Name=RM680_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06815;old_locus_tag=RM680_06820
NZ_JAVRJI010000006.1	Protein Homology	CDS	171025	171798	.	+	0	ID=cds-WP_002505142.1;Parent=gene-RM680_RS06815;Dbxref=GenBank:WP_002505142.1;Name=WP_002505142.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499155.1;locus_tag=RM680_RS06815;product=tandem-type lipoprotein;protein_id=WP_002505142.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	172059	172604	.	-	.	ID=gene-RM680_RS06820;Name=RM680_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06820;old_locus_tag=RM680_06825
NZ_JAVRJI010000006.1	Protein Homology	CDS	172059	172604	.	-	0	ID=cds-WP_001830548.1;Parent=gene-RM680_RS06820;Dbxref=GenBank:WP_001830548.1;Name=WP_001830548.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830548.1;locus_tag=RM680_RS06820;product=radical SAM protein;protein_id=WP_001830548.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	172765	173670	.	+	.	ID=gene-RM680_RS06825;Name=RM680_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06825;old_locus_tag=RM680_06830
NZ_JAVRJI010000006.1	Protein Homology	CDS	172765	173670	.	+	0	ID=cds-WP_001830491.1;Parent=gene-RM680_RS06825;Dbxref=GenBank:WP_001830491.1;Name=WP_001830491.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0140657;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489406.1;locus_tag=RM680_RS06825;product=ABC transporter ATP-binding protein;protein_id=WP_001830491.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	173645	174766	.	+	.	ID=gene-RM680_RS06830;Name=RM680_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06830;old_locus_tag=RM680_06835
NZ_JAVRJI010000006.1	Protein Homology	CDS	173645	174766	.	+	0	ID=cds-WP_020368145.1;Parent=gene-RM680_RS06830;Dbxref=GenBank:WP_020368145.1;Name=WP_020368145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470727.1;locus_tag=RM680_RS06830;product=ABC transporter permease;protein_id=WP_020368145.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	174732	175343	.	+	.	ID=gene-RM680_RS06835;Name=RM680_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06835;old_locus_tag=RM680_06840
NZ_JAVRJI010000006.1	Protein Homology	CDS	174732	175343	.	+	0	ID=cds-WP_002470724.1;Parent=gene-RM680_RS06835;Dbxref=GenBank:WP_002470724.1;Name=WP_002470724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494536.1;locus_tag=RM680_RS06835;product=hypothetical protein;protein_id=WP_002470724.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	175424	176089	.	+	.	ID=gene-RM680_RS06840;Name=RM680_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06840;old_locus_tag=RM680_06845
NZ_JAVRJI010000006.1	Protein Homology	CDS	175424	176089	.	+	0	ID=cds-WP_001830535.1;Parent=gene-RM680_RS06840;Dbxref=GenBank:WP_001830535.1;Name=WP_001830535.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455935.1;locus_tag=RM680_RS06840;product=response regulator transcription factor;protein_id=WP_001830535.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	176077	177168	.	+	.	ID=gene-RM680_RS06845;Name=RM680_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06845;old_locus_tag=RM680_06850
NZ_JAVRJI010000006.1	Protein Homology	CDS	176077	177168	.	+	0	ID=cds-WP_001830496.1;Parent=gene-RM680_RS06845;Dbxref=GenBank:WP_001830496.1;Name=WP_001830496.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830496.1;locus_tag=RM680_RS06845;product=sensor histidine kinase;protein_id=WP_001830496.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	178102	179463	.	+	.	ID=gene-RM680_RS06850;Name=RM680_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06850;old_locus_tag=RM680_06855
NZ_JAVRJI010000006.1	Protein Homology	CDS	178102	179463	.	+	0	ID=cds-WP_002470723.1;Parent=gene-RM680_RS06850;Dbxref=GenBank:WP_002470723.1;Name=WP_002470723.1;Ontology_term=GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469141.1;locus_tag=RM680_RS06850;product=SLC45 family MFS transporter;protein_id=WP_002470723.1;transl_table=11
NZ_JAVRJI010000006.1	RefSeq	gene	180006	180491	.	+	.	ID=gene-RM680_RS06855;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM680_RS06855;old_locus_tag=RM680_06860
NZ_JAVRJI010000006.1	Protein Homology	CDS	180006	180491	.	+	0	ID=cds-WP_002469422.1;Parent=gene-RM680_RS06855;Dbxref=GenBank:WP_002469422.1;Name=WP_002469422.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455937.1;locus_tag=RM680_RS06855;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_002469422.1;transl_table=11
##sequence-region NZ_JAVRJI010000007.1 1 121037
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000007.1	RefSeq	region	1	121037	.	+	.	ID=NZ_JAVRJI010000007.1:1..121037;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000007.1	RefSeq	gene	247	969	.	+	.	ID=gene-RM680_RS06860;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=RM680_RS06860;old_locus_tag=RM680_06865
NZ_JAVRJI010000007.1	Protein Homology	CDS	247	969	.	+	0	ID=cds-WP_002495410.1;Parent=gene-RM680_RS06860;Dbxref=GenBank:WP_002495410.1;Name=WP_002495410.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499488.1;locus_tag=RM680_RS06860;product=adaptor protein MecA;protein_id=WP_002495410.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	1065	2045	.	+	.	ID=gene-RM680_RS06865;Name=RM680_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06865;old_locus_tag=RM680_06870
NZ_JAVRJI010000007.1	Protein Homology	CDS	1065	2045	.	+	0	ID=cds-WP_049315972.1;Parent=gene-RM680_RS06865;Dbxref=GenBank:WP_049315972.1;Name=WP_049315972.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113780.1;locus_tag=RM680_RS06865;product=competence protein CoiA;protein_id=WP_049315972.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	2096	3904	.	+	.	ID=gene-RM680_RS06870;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=RM680_RS06870;old_locus_tag=RM680_06875
NZ_JAVRJI010000007.1	Protein Homology	CDS	2096	3904	.	+	0	ID=cds-WP_001829279.1;Parent=gene-RM680_RS06870;Dbxref=GenBank:WP_001829279.1;Name=WP_001829279.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476530.1;locus_tag=RM680_RS06870;product=oligoendopeptidase F;protein_id=WP_001829279.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	4367	5164	.	-	.	ID=gene-RM680_RS06875;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=RM680_RS06875;old_locus_tag=RM680_06880
NZ_JAVRJI010000007.1	Protein Homology	CDS	4367	5164	.	-	0	ID=cds-WP_002467882.1;Parent=gene-RM680_RS06875;Dbxref=GenBank:WP_002467882.1;Name=WP_002467882.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503942.1;locus_tag=RM680_RS06875;product=protease adaptor protein YjbH;protein_id=WP_002467882.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	5187	5552	.	-	.	ID=gene-RM680_RS06880;Name=RM680_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06880;old_locus_tag=RM680_06885
NZ_JAVRJI010000007.1	Protein Homology	CDS	5187	5552	.	-	0	ID=cds-WP_002467876.1;Parent=gene-RM680_RS06880;Dbxref=GenBank:WP_002467876.1;Name=WP_002467876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012087548.1;locus_tag=RM680_RS06880;product=truncated hemoglobin YjbI;protein_id=WP_002467876.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	5634	6224	.	-	.	ID=gene-RM680_RS06885;Name=RM680_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06885;old_locus_tag=RM680_06890
NZ_JAVRJI010000007.1	Protein Homology	CDS	5634	6224	.	-	0	ID=cds-WP_002467877.1;Parent=gene-RM680_RS06885;Dbxref=GenBank:WP_002467877.1;Name=WP_002467877.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476532.1;locus_tag=RM680_RS06885;product=CYTH domain-containing protein;protein_id=WP_002467877.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	6508	6855	.	+	.	ID=gene-RM680_RS06890;Name=RM680_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06890;old_locus_tag=RM680_06895
NZ_JAVRJI010000007.1	Protein Homology	CDS	6508	6855	.	+	0	ID=cds-WP_001829330.1;Parent=gene-RM680_RS06890;Dbxref=GenBank:WP_001829330.1;Name=WP_001829330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441855.1;locus_tag=RM680_RS06890;product=UPF0738 family protein;protein_id=WP_001829330.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	6872	7507	.	+	.	ID=gene-RM680_RS06895;Name=RM680_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06895;old_locus_tag=RM680_06900
NZ_JAVRJI010000007.1	Protein Homology	CDS	6872	7507	.	+	0	ID=cds-WP_001829266.1;Parent=gene-RM680_RS06895;Dbxref=GenBank:WP_001829266.1;Name=WP_001829266.1;Ontology_term=GO:0015969,GO:0016310,GO:0005524,GO:0008728,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP diphosphokinase activity|0008728||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499495.1;locus_tag=RM680_RS06895;product=GTP pyrophosphokinase;protein_id=WP_001829266.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	7521	8330	.	+	.	ID=gene-RM680_RS06900;Name=RM680_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06900;old_locus_tag=RM680_06905
NZ_JAVRJI010000007.1	Protein Homology	CDS	7521	8330	.	+	0	ID=cds-WP_001829306.1;Parent=gene-RM680_RS06900;Dbxref=GenBank:WP_001829306.1;Name=WP_001829306.1;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP+ biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499496.1;locus_tag=RM680_RS06900;product=NAD kinase;protein_id=WP_001829306.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	8327	9181	.	+	.	ID=gene-RM680_RS06905;Name=RM680_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06905;old_locus_tag=RM680_06910
NZ_JAVRJI010000007.1	Protein Homology	CDS	8327	9181	.	+	0	ID=cds-WP_002467875.1;Parent=gene-RM680_RS06905;Dbxref=GenBank:WP_002467875.1;Name=WP_002467875.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464405.1;locus_tag=RM680_RS06905;product=RluA family pseudouridine synthase;protein_id=WP_002467875.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	9206	10591	.	+	.	ID=gene-RM680_RS06910;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=RM680_RS06910;old_locus_tag=RM680_06915
NZ_JAVRJI010000007.1	Protein Homology	CDS	9206	10591	.	+	0	ID=cds-WP_001829287.1;Parent=gene-RM680_RS06910;Dbxref=GenBank:WP_001829287.1;Name=WP_001829287.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441862.1;locus_tag=RM680_RS06910;product=magnesium transporter;protein_id=WP_001829287.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	10601	12445	.	+	.	ID=gene-RM680_RS06915;Name=RM680_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06915;old_locus_tag=RM680_06920
NZ_JAVRJI010000007.1	Protein Homology	CDS	10601	12445	.	+	0	ID=cds-WP_311563533.1;Parent=gene-RM680_RS06915;Dbxref=GenBank:WP_311563533.1;Name=WP_311563533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499499.1;locus_tag=RM680_RS06915;product=monovalent cation:proton antiporter family protein;protein_id=WP_311563533.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	13155	13778	.	+	.	ID=gene-RM680_RS06920;Name=RM680_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06920;old_locus_tag=RM680_06925
NZ_JAVRJI010000007.1	Protein Homology	CDS	13155	13778	.	+	0	ID=cds-WP_001829337.1;Parent=gene-RM680_RS06920;Dbxref=GenBank:WP_001829337.1;Name=WP_001829337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829337.1;locus_tag=RM680_RS06920;product=DUF443 domain-containing protein;protein_id=WP_001829337.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	13806	14102	.	+	.	ID=gene-RM680_RS06925;Name=RM680_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06925;old_locus_tag=RM680_06930
NZ_JAVRJI010000007.1	Protein Homology	CDS	13806	14102	.	+	0	ID=cds-WP_025987217.1;Parent=gene-RM680_RS06925;Dbxref=GenBank:WP_025987217.1;Name=WP_025987217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497226.1;locus_tag=RM680_RS06925;product=DUF4176 domain-containing protein;protein_id=WP_025987217.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	14214	14309	.	+	.	ID=gene-RM680_RS06930;Name=RM680_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06930;old_locus_tag=RM680_06935
NZ_JAVRJI010000007.1	Protein Homology	CDS	14214	14309	.	+	0	ID=cds-WP_107362610.1;Parent=gene-RM680_RS06930;Dbxref=GenBank:WP_107362610.1;Name=WP_107362610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000889978.1;locus_tag=RM680_RS06930;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_107362610.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	14376	14579	.	-	.	ID=gene-RM680_RS06935;Name=RM680_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06935;old_locus_tag=RM680_06940
NZ_JAVRJI010000007.1	GeneMarkS-2+	CDS	14376	14579	.	-	0	ID=cds-WP_001829258.1;Parent=gene-RM680_RS06935;Dbxref=GenBank:WP_001829258.1;Name=WP_001829258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS06935;product=transposase;protein_id=WP_001829258.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	pseudogene	14626	16059	.	+	.	ID=gene-RM680_RS11990;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=pseudogene;locus_tag=RM680_RS11990;partial=true;pseudo=true;start_range=.,14626
NZ_JAVRJI010000007.1	Protein Homology	CDS	14626	16059	.	+	0	ID=cds-RM680_RS11990;Parent=gene-RM680_RS11990;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637937.1;locus_tag=RM680_RS11990;partial=true;product=glucose-6-phosphate dehydrogenase;pseudo=true;start_range=.,14626;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	16158	18416	.	+	.	ID=gene-RM680_RS06955;Name=RM680_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06955;old_locus_tag=RM680_06960
NZ_JAVRJI010000007.1	Protein Homology	CDS	16158	18416	.	+	0	ID=cds-WP_311563534.1;Parent=gene-RM680_RS06955;Dbxref=GenBank:WP_311563534.1;Name=WP_311563534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446094.1;locus_tag=RM680_RS06955;product=excinuclease ABC subunit UvrA;protein_id=WP_311563534.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	18653	18754	.	+	.	ID=gene-RM680_RS06960;Name=RM680_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06960;old_locus_tag=RM680_06965
NZ_JAVRJI010000007.1	Protein Homology	CDS	18653	18754	.	+	0	ID=cds-WP_002494359.1;Parent=gene-RM680_RS06960;Dbxref=GenBank:WP_002494359.1;Name=WP_002494359.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013777.6;locus_tag=RM680_RS06960;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_002494359.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	pseudogene	18912	19470	.	-	.	ID=gene-RM680_RS06965;Name=RM680_RS06965;end_range=19470,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS06965;old_locus_tag=RM680_06970;partial=true;pseudo=true
NZ_JAVRJI010000007.1	Protein Homology	CDS	18912	19470	.	-	0	ID=cds-RM680_RS06965;Parent=gene-RM680_RS06965;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=19470,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636329.1;locus_tag=RM680_RS06965;partial=true;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	pseudogene	19591	19904	.	+	.	ID=gene-RM680_RS06970;Name=RM680_RS06970;end_range=19904,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS06970;old_locus_tag=RM680_06975;partial=true;pseudo=true
NZ_JAVRJI010000007.1	Protein Homology	CDS	19591	19904	.	+	0	ID=cds-RM680_RS06970;Parent=gene-RM680_RS06970;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;end_range=19904,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474535.1;locus_tag=RM680_RS06970;partial=true;product=recombinase family protein;pseudo=true;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	20035	20406	.	+	.	ID=gene-RM680_RS11995;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=RM680_RS11995
NZ_JAVRJI010000007.1	Protein Homology	CDS	20035	20406	.	+	0	ID=cds-WP_002487703.1;Parent=gene-RM680_RS11995;Dbxref=GenBank:WP_002487703.1;Name=WP_002487703.1;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458050.1;locus_tag=RM680_RS11995;product=IS200/IS605 family transposase;protein_id=WP_002487703.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	20628	21398	.	+	.	ID=gene-RM680_RS06985;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=RM680_RS06985;old_locus_tag=RM680_06990
NZ_JAVRJI010000007.1	Protein Homology	CDS	20628	21398	.	+	0	ID=cds-WP_001829254.1;Parent=gene-RM680_RS06985;Dbxref=GenBank:WP_001829254.1;Name=WP_001829254.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476543.1;locus_tag=RM680_RS06985;product=enoyl-ACP reductase FabI;protein_id=WP_001829254.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	21797	22882	.	-	.	ID=gene-RM680_RS06990;Name=cozEa;gbkey=Gene;gene=cozEa;gene_biotype=protein_coding;locus_tag=RM680_RS06990;old_locus_tag=RM680_06995
NZ_JAVRJI010000007.1	Protein Homology	CDS	21797	22882	.	-	0	ID=cds-WP_001829303.1;Parent=gene-RM680_RS06990;Dbxref=GenBank:WP_001829303.1;Name=WP_001829303.1;gbkey=CDS;gene=cozEa;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499501.1;locus_tag=RM680_RS06990;product=lipoteichoic acid biosynthesis protein CozEa;protein_id=WP_001829303.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	23107	23862	.	+	.	ID=gene-RM680_RS06995;Name=RM680_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS06995;old_locus_tag=RM680_07000
NZ_JAVRJI010000007.1	Protein Homology	CDS	23107	23862	.	+	0	ID=cds-WP_001832657.1;Parent=gene-RM680_RS06995;Dbxref=GenBank:WP_001832657.1;Name=WP_001832657.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829316.1;locus_tag=RM680_RS06995;product=esterase family protein;protein_id=WP_001832657.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	24016	24525	.	+	.	ID=gene-RM680_RS07000;Name=RM680_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07000;old_locus_tag=RM680_07005
NZ_JAVRJI010000007.1	Protein Homology	CDS	24016	24525	.	+	0	ID=cds-WP_002487682.1;Parent=gene-RM680_RS07000;Dbxref=GenBank:WP_002487682.1;Name=WP_002487682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494354.1;locus_tag=RM680_RS07000;product=YjcG family protein;protein_id=WP_002487682.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	24790	25983	.	-	.	ID=gene-RM680_RS07005;Name=ltaA;gbkey=Gene;gene=ltaA;gene_biotype=protein_coding;locus_tag=RM680_RS07005;old_locus_tag=RM680_07010
NZ_JAVRJI010000007.1	Protein Homology	CDS	24790	25983	.	-	0	ID=cds-WP_002497574.1;Parent=gene-RM680_RS07005;Dbxref=GenBank:WP_002497574.1;Name=WP_002497574.1;Ontology_term=GO:0070395,GO:0140327;gbkey=CDS;gene=ltaA;go_function=flippase activity|0140327||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363656.1;locus_tag=RM680_RS07005;product=lipoteichoic acid biosynthesis MFS flippase LtaA;protein_id=WP_002497574.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	25961	27136	.	-	.	ID=gene-RM680_RS07010;Name=RM680_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07010;old_locus_tag=RM680_07015
NZ_JAVRJI010000007.1	Protein Homology	CDS	25961	27136	.	-	0	ID=cds-WP_001829298.1;Parent=gene-RM680_RS07010;Dbxref=GenBank:WP_001829298.1;Name=WP_001829298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499506.1;locus_tag=RM680_RS07010;product=diglucosyl diacylglycerol synthase;protein_id=WP_001829298.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	27657	29141	.	+	.	ID=gene-RM680_RS07015;Name=RM680_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07015;old_locus_tag=RM680_07020
NZ_JAVRJI010000007.1	Protein Homology	CDS	27657	29141	.	+	0	ID=cds-WP_020368023.1;Parent=gene-RM680_RS07015;Dbxref=GenBank:WP_020368023.1;Name=WP_020368023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829323.1;locus_tag=RM680_RS07015;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WP_020368023.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	29131	29376	.	+	.	ID=gene-RM680_RS07020;Name=RM680_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07020;old_locus_tag=RM680_07025
NZ_JAVRJI010000007.1	Protein Homology	CDS	29131	29376	.	+	0	ID=cds-WP_020368024.1;Parent=gene-RM680_RS07020;Dbxref=GenBank:WP_020368024.1;Name=WP_020368024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368024.1;locus_tag=RM680_RS07020;product=YueH family protein;protein_id=WP_020368024.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	29380	30942	.	+	.	ID=gene-RM680_RS07025;Name=RM680_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07025;old_locus_tag=RM680_07030
NZ_JAVRJI010000007.1	Protein Homology	CDS	29380	30942	.	+	0	ID=cds-WP_020368025.1;Parent=gene-RM680_RS07025;Dbxref=GenBank:WP_020368025.1;Name=WP_020368025.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499509.1;locus_tag=RM680_RS07025;product=peptide chain release factor 3;protein_id=WP_020368025.1;transl_table=11
NZ_JAVRJI010000007.1	cmsearch	riboswitch	31056	31179	.	+	.	ID=id-NZ_JAVRJI010000007.1:31056..31179;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000007.1	RefSeq	gene	31251	32057	.	+	.	ID=gene-RM680_RS07030;Name=RM680_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07030;old_locus_tag=RM680_07035
NZ_JAVRJI010000007.1	Protein Homology	CDS	31251	32057	.	+	0	ID=cds-WP_002439148.1;Parent=gene-RM680_RS07030;Dbxref=GenBank:WP_002439148.1;Name=WP_002439148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829314.1;locus_tag=RM680_RS07030;product=TerC family protein;protein_id=WP_002439148.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	32268	34025	.	+	.	ID=gene-RM680_RS07035;Name=RM680_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07035;old_locus_tag=RM680_07040
NZ_JAVRJI010000007.1	Protein Homology	CDS	32268	34025	.	+	0	ID=cds-WP_001829335.1;Parent=gene-RM680_RS07035;Dbxref=GenBank:WP_001829335.1;Name=WP_001829335.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829335.1;locus_tag=RM680_RS07035;product=S1C family serine protease;protein_id=WP_001829335.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	34043	35401	.	+	.	ID=gene-RM680_RS07040;Name=RM680_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07040;old_locus_tag=RM680_07045
NZ_JAVRJI010000007.1	Protein Homology	CDS	34043	35401	.	+	0	ID=cds-WP_001829321.1;Parent=gene-RM680_RS07040;Dbxref=GenBank:WP_001829321.1;Name=WP_001829321.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499512.1;locus_tag=RM680_RS07040;product=TrkH family potassium uptake protein;protein_id=WP_001829321.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	35540	37045	.	+	.	ID=gene-RM680_RS07045;Name=RM680_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07045;old_locus_tag=RM680_07050
NZ_JAVRJI010000007.1	Protein Homology	CDS	35540	37045	.	+	0	ID=cds-WP_001829277.1;Parent=gene-RM680_RS07045;Dbxref=GenBank:WP_001829277.1;Name=WP_001829277.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458038.1;locus_tag=RM680_RS07045;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_001829277.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	37148	37750	.	-	.	ID=gene-RM680_RS07050;Name=RM680_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07050;old_locus_tag=RM680_07055
NZ_JAVRJI010000007.1	Protein Homology	CDS	37148	37750	.	-	0	ID=cds-WP_001829312.1;Parent=gene-RM680_RS07050;Dbxref=GenBank:WP_001829312.1;Name=WP_001829312.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458039.1;locus_tag=RM680_RS07050;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_001829312.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	37756	37941	.	-	.	ID=gene-RM680_RS07055;Name=RM680_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07055;old_locus_tag=RM680_07060
NZ_JAVRJI010000007.1	Protein Homology	CDS	37756	37941	.	-	0	ID=cds-WP_001829339.1;Parent=gene-RM680_RS07055;Dbxref=GenBank:WP_001829339.1;Name=WP_001829339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899900.1;locus_tag=RM680_RS07055;product=YkvS family protein;protein_id=WP_001829339.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	38146	39132	.	+	.	ID=gene-RM680_RS07060;Name=RM680_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07060;old_locus_tag=RM680_07065
NZ_JAVRJI010000007.1	Protein Homology	CDS	38146	39132	.	+	0	ID=cds-WP_001829269.1;Parent=gene-RM680_RS07060;Dbxref=GenBank:WP_001829269.1;Name=WP_001829269.1;Ontology_term=GO:0009249,GO:0017118;gbkey=CDS;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499516.1;locus_tag=RM680_RS07060;product=lipoate--protein ligase;protein_id=WP_001829269.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	39210	39428	.	-	.	ID=gene-RM680_RS07065;Name=RM680_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07065;old_locus_tag=RM680_07070
NZ_JAVRJI010000007.1	Protein Homology	CDS	39210	39428	.	-	0	ID=cds-WP_001829292.1;Parent=gene-RM680_RS07065;Dbxref=GenBank:WP_001829292.1;Name=WP_001829292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464422.1;locus_tag=RM680_RS07065;product=IDEAL domain-containing protein;protein_id=WP_001829292.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	39643	40218	.	+	.	ID=gene-RM680_RS07070;Name=RM680_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07070;old_locus_tag=RM680_07075
NZ_JAVRJI010000007.1	Protein Homology	CDS	39643	40218	.	+	0	ID=cds-WP_001829272.1;Parent=gene-RM680_RS07070;Dbxref=GenBank:WP_001829272.1;Name=WP_001829272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464423.1;locus_tag=RM680_RS07070;product=competence protein ComK;protein_id=WP_001829272.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	40400	40474	.	+	.	ID=gene-RM680_RS07075;Name=RM680_RS07075;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS07075;old_locus_tag=RM680_07080
NZ_JAVRJI010000007.1	tRNAscan-SE	tRNA	40400	40474	.	+	.	ID=rna-RM680_RS07075;Parent=gene-RM680_RS07075;anticodon=(pos:40432..40434);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS07075;product=tRNA-Asn
NZ_JAVRJI010000007.1	tRNAscan-SE	exon	40400	40474	.	+	.	ID=exon-RM680_RS07075-1;Parent=rna-RM680_RS07075;anticodon=(pos:40432..40434);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS07075;product=tRNA-Asn
NZ_JAVRJI010000007.1	RefSeq	gene	40478	40566	.	+	.	ID=gene-RM680_RS07080;Name=RM680_RS07080;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS07080;old_locus_tag=RM680_07085
NZ_JAVRJI010000007.1	tRNAscan-SE	tRNA	40478	40566	.	+	.	ID=rna-RM680_RS07080;Parent=gene-RM680_RS07080;anticodon=(pos:40513..40515);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS07080;product=tRNA-Ser
NZ_JAVRJI010000007.1	tRNAscan-SE	exon	40478	40566	.	+	.	ID=exon-RM680_RS07080-1;Parent=rna-RM680_RS07080;anticodon=(pos:40513..40515);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS07080;product=tRNA-Ser
NZ_JAVRJI010000007.1	RefSeq	pseudogene	41277	41816	.	+	.	ID=gene-RM680_RS07085;Name=mobV;gbkey=Gene;gene=mobV;gene_biotype=pseudogene;locus_tag=RM680_RS07085;old_locus_tag=RM680_07090;pseudo=true
NZ_JAVRJI010000007.1	Protein Homology	CDS	41277	41816	.	+	0	ID=cds-RM680_RS07085;Parent=gene-RM680_RS07085;Note=frameshifted;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF013258.6;locus_tag=RM680_RS07085;product=MobV family relaxase;pseudo=true;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	42018	42254	.	+	.	ID=gene-RM680_RS07090;Name=RM680_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07090;old_locus_tag=RM680_07095
NZ_JAVRJI010000007.1	Protein Homology	CDS	42018	42254	.	+	0	ID=cds-WP_001829451.1;Parent=gene-RM680_RS07090;Dbxref=GenBank:WP_001829451.1;Name=WP_001829451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829451.1;locus_tag=RM680_RS07090;product=hypothetical protein;protein_id=WP_001829451.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	42517	42858	.	+	.	ID=gene-RM680_RS07095;Name=RM680_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07095;old_locus_tag=RM680_07100
NZ_JAVRJI010000007.1	Protein Homology	CDS	42517	42858	.	+	0	ID=cds-WP_032603364.1;Parent=gene-RM680_RS07095;Dbxref=GenBank:WP_032603364.1;Name=WP_032603364.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505261.1;locus_tag=RM680_RS07095;product=fatty acid desaturase;protein_id=WP_032603364.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	43032	43478	.	+	.	ID=gene-RM680_RS07100;Name=RM680_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07100;old_locus_tag=RM680_07105
NZ_JAVRJI010000007.1	Protein Homology	CDS	43032	43478	.	+	0	ID=cds-WP_228840189.1;Parent=gene-RM680_RS07100;Dbxref=GenBank:WP_228840189.1;Name=WP_228840189.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: protein motif:HMM:NF013933.6;locus_tag=RM680_RS07100;product=LysE/ArgO family amino acid transporter;protein_id=WP_228840189.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	43548	43706	.	-	.	ID=gene-RM680_RS07105;Name=RM680_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07105;old_locus_tag=RM680_07110
NZ_JAVRJI010000007.1	Protein Homology	CDS	43548	43706	.	-	0	ID=cds-WP_002503132.1;Parent=gene-RM680_RS07105;Dbxref=GenBank:WP_002503132.1;Name=WP_002503132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446129.1;locus_tag=RM680_RS07105;product=replication/maintenance protein RepL;protein_id=WP_002503132.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	44137	44253	.	-	.	ID=gene-RM680_RS12000;Name=RM680_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS12000
NZ_JAVRJI010000007.1	Protein Homology	CDS	44137	44253	.	-	0	ID=cds-WP_353955880.1;Parent=gene-RM680_RS12000;Dbxref=GenBank:WP_353955880.1;Name=WP_353955880.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040879.1;locus_tag=RM680_RS12000;product=SAR1012 family small protein;protein_id=WP_353955880.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	44357	44572	.	-	.	ID=gene-RM680_RS07110;Name=RM680_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07110;old_locus_tag=RM680_07115
NZ_JAVRJI010000007.1	Protein Homology	CDS	44357	44572	.	-	0	ID=cds-WP_001831694.1;Parent=gene-RM680_RS07110;Dbxref=GenBank:WP_001831694.1;Name=WP_001831694.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831694.1;locus_tag=RM680_RS07110;product=TM2 domain-containing protein;protein_id=WP_001831694.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	44803	45360	.	+	.	ID=gene-RM680_RS07115;Name=RM680_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07115;old_locus_tag=RM680_07120
NZ_JAVRJI010000007.1	Protein Homology	CDS	44803	45360	.	+	0	ID=cds-WP_001831688.1;Parent=gene-RM680_RS07115;Dbxref=GenBank:WP_001831688.1;Name=WP_001831688.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486584.1;locus_tag=RM680_RS07115;product=GNAT family N-acetyltransferase;protein_id=WP_001831688.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	45830	46768	.	-	.	ID=gene-RM680_RS07120;Name=RM680_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07120;old_locus_tag=RM680_07125
NZ_JAVRJI010000007.1	Protein Homology	CDS	45830	46768	.	-	0	ID=cds-WP_001831680.1;Parent=gene-RM680_RS07120;Dbxref=GenBank:WP_001831680.1;Name=WP_001831680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499533.1;locus_tag=RM680_RS07120;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_001831680.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	46947	48308	.	+	.	ID=gene-RM680_RS07125;Name=RM680_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07125;old_locus_tag=RM680_07130
NZ_JAVRJI010000007.1	Protein Homology	CDS	46947	48308	.	+	0	ID=cds-WP_002439285.1;Parent=gene-RM680_RS07125;Dbxref=GenBank:WP_002439285.1;Name=WP_002439285.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439285.1;locus_tag=RM680_RS07125;product=isochorismate synthase;protein_id=WP_002439285.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	48295	49968	.	+	.	ID=gene-RM680_RS07130;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=RM680_RS07130;old_locus_tag=RM680_07135
NZ_JAVRJI010000007.1	Protein Homology	CDS	48295	49968	.	+	0	ID=cds-WP_001833068.1;Parent=gene-RM680_RS07130;Dbxref=GenBank:WP_001833068.1;Name=WP_001833068.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499536.1;locus_tag=RM680_RS07130;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_001833068.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	49955	50758	.	+	.	ID=gene-RM680_RS07135;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=RM680_RS07135;old_locus_tag=RM680_07140
NZ_JAVRJI010000007.1	Protein Homology	CDS	49955	50758	.	+	0	ID=cds-WP_002439289.1;Parent=gene-RM680_RS07135;Dbxref=GenBank:WP_002439289.1;Name=WP_002439289.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495593.1;locus_tag=RM680_RS07135;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_002439289.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	50751	51569	.	+	.	ID=gene-RM680_RS07140;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=RM680_RS07140;old_locus_tag=RM680_07145
NZ_JAVRJI010000007.1	Protein Homology	CDS	50751	51569	.	+	0	ID=cds-WP_001831706.1;Parent=gene-RM680_RS07140;Dbxref=GenBank:WP_001831706.1;Name=WP_001831706.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015899909.1;locus_tag=RM680_RS07140;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_001831706.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	51914	53098	.	-	.	ID=gene-RM680_RS07145;Name=RM680_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07145;old_locus_tag=RM680_07150
NZ_JAVRJI010000007.1	Protein Homology	CDS	51914	53098	.	-	0	ID=cds-WP_001831637.1;Parent=gene-RM680_RS07145;Dbxref=GenBank:WP_001831637.1;Name=WP_001831637.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500751.1;locus_tag=RM680_RS07145;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_001831637.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	53241	54248	.	-	.	ID=gene-RM680_RS07150;Name=RM680_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07150;old_locus_tag=RM680_07155
NZ_JAVRJI010000007.1	Protein Homology	CDS	53241	54248	.	-	0	ID=cds-WP_001833065.1;Parent=gene-RM680_RS07150;Dbxref=GenBank:WP_001833065.1;Name=WP_001833065.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486580.1;locus_tag=RM680_RS07150;product=acyltransferase family protein;protein_id=WP_001833065.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	54402	54821	.	+	.	ID=gene-RM680_RS07155;Name=RM680_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07155;old_locus_tag=RM680_07160
NZ_JAVRJI010000007.1	Protein Homology	CDS	54402	54821	.	+	0	ID=cds-WP_002484513.1;Parent=gene-RM680_RS07155;Dbxref=GenBank:WP_002484513.1;Name=WP_002484513.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831691.1;locus_tag=RM680_RS07155;product=MarR family transcriptional regulator;protein_id=WP_002484513.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	55061	59068	.	-	.	ID=gene-RM680_RS07160;Name=RM680_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07160;old_locus_tag=RM680_07165
NZ_JAVRJI010000007.1	Protein Homology	CDS	55061	59068	.	-	0	ID=cds-WP_001831665.1;Parent=gene-RM680_RS07160;Dbxref=GenBank:WP_001831665.1;Name=WP_001831665.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446137.1;locus_tag=RM680_RS07160;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_001831665.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	59309	59731	.	-	.	ID=gene-RM680_RS07165;Name=RM680_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07165;old_locus_tag=RM680_07170
NZ_JAVRJI010000007.1	Protein Homology	CDS	59309	59731	.	-	0	ID=cds-WP_001831666.1;Parent=gene-RM680_RS07165;Dbxref=GenBank:WP_001831666.1;Name=WP_001831666.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491613.1;locus_tag=RM680_RS07165;product=GNAT family N-acetyltransferase;protein_id=WP_001831666.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	60305	60775	.	-	.	ID=gene-RM680_RS07170;Name=RM680_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07170;old_locus_tag=RM680_07175
NZ_JAVRJI010000007.1	Protein Homology	CDS	60305	60775	.	-	0	ID=cds-WP_001831729.1;Parent=gene-RM680_RS07170;Dbxref=GenBank:WP_001831729.1;Name=WP_001831729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499548.1;locus_tag=RM680_RS07170;product=DUF2538 family protein;protein_id=WP_001831729.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	60823	62061	.	-	.	ID=gene-RM680_RS07175;Name=RM680_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07175;old_locus_tag=RM680_07180
NZ_JAVRJI010000007.1	Protein Homology	CDS	60823	62061	.	-	0	ID=cds-WP_001833067.1;Parent=gene-RM680_RS07175;Dbxref=GenBank:WP_001833067.1;Name=WP_001833067.1;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493342.1;locus_tag=RM680_RS07175;product=LCP family protein;protein_id=WP_001833067.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	62868	64070	.	+	.	ID=gene-RM680_RS07180;Name=RM680_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07180;old_locus_tag=RM680_07185
NZ_JAVRJI010000007.1	Protein Homology	CDS	62868	64070	.	+	0	ID=cds-WP_001833073.1;Parent=gene-RM680_RS07180;Dbxref=GenBank:WP_001833073.1;Name=WP_001833073.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001833073.1;locus_tag=RM680_RS07180;product=serine hydrolase domain-containing protein;protein_id=WP_001833073.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	64227	65135	.	-	.	ID=gene-RM680_RS07185;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=RM680_RS07185;old_locus_tag=RM680_07190
NZ_JAVRJI010000007.1	Protein Homology	CDS	64227	65135	.	-	0	ID=cds-WP_001831704.1;Parent=gene-RM680_RS07185;Dbxref=GenBank:WP_001831704.1;Name=WP_001831704.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464812.1;locus_tag=RM680_RS07185;product=ribonucleoside hydrolase RihC;protein_id=WP_001831704.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	65322	65612	.	-	.	ID=gene-RM680_RS07190;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=RM680_RS07190;old_locus_tag=RM680_07195
NZ_JAVRJI010000007.1	Protein Homology	CDS	65322	65612	.	-	0	ID=cds-WP_001831700.1;Parent=gene-RM680_RS07190;Dbxref=GenBank:WP_001831700.1;Name=WP_001831700.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxD;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474577.1;locus_tag=RM680_RS07190;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=WP_001831700.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	65609	66214	.	-	.	ID=gene-RM680_RS07195;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=RM680_RS07195;old_locus_tag=RM680_07200
NZ_JAVRJI010000007.1	Protein Homology	CDS	65609	66214	.	-	0	ID=cds-WP_001831738.1;Parent=gene-RM680_RS07195;Dbxref=GenBank:WP_001831738.1;Name=WP_001831738.1;Ontology_term=GO:0015990,GO:0042773,GO:0009055,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=RM680_RS07195;product=cytochrome aa3 quinol oxidase subunit III;protein_id=WP_001831738.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	66204	68192	.	-	.	ID=gene-RM680_RS07200;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=RM680_RS07200;old_locus_tag=RM680_07205
NZ_JAVRJI010000007.1	Protein Homology	CDS	66204	68192	.	-	0	ID=cds-WP_001831713.1;Parent=gene-RM680_RS07200;Dbxref=GenBank:WP_001831713.1;Name=WP_001831713.1;Ontology_term=GO:0015990,GO:0004129,GO:0005507,GO:0020037,GO:0016020;gbkey=CDS;gene=qoxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA,copper ion binding|0005507||IEA,heme binding|0020037||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010769.1;locus_tag=RM680_RS07200;product=cytochrome aa3 quinol oxidase subunit I;protein_id=WP_001831713.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	68192	69316	.	-	.	ID=gene-RM680_RS07205;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=RM680_RS07205;old_locus_tag=RM680_07210
NZ_JAVRJI010000007.1	Protein Homology	CDS	68192	69316	.	-	0	ID=cds-WP_001831736.1;Parent=gene-RM680_RS07205;Dbxref=GenBank:WP_001831736.1;Name=WP_001831736.1;Ontology_term=GO:0015990,GO:0009055,GO:0009486,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxA;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,cytochrome bo3 ubiquinol oxidase activity|0009486||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499554.1;locus_tag=RM680_RS07205;product=cytochrome aa3 quinol oxidase subunit II;protein_id=WP_001831736.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	69855	70172	.	-	.	ID=gene-RM680_RS07210;Name=RM680_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07210;old_locus_tag=RM680_07215
NZ_JAVRJI010000007.1	Protein Homology	CDS	69855	70172	.	-	0	ID=cds-WP_001831741.1;Parent=gene-RM680_RS07210;Dbxref=GenBank:WP_001831741.1;Name=WP_001831741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499556.1;locus_tag=RM680_RS07210;product=DUF5011 domain-containing protein;protein_id=WP_001831741.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	70544	71404	.	-	.	ID=gene-RM680_RS07215;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=RM680_RS07215;old_locus_tag=RM680_07220
NZ_JAVRJI010000007.1	Protein Homology	CDS	70544	71404	.	-	0	ID=cds-WP_001831669.1;Parent=gene-RM680_RS07215;Dbxref=GenBank:WP_001831669.1;Name=WP_001831669.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486054.1;locus_tag=RM680_RS07215;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_001831669.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	71609	72091	.	+	.	ID=gene-RM680_RS07220;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=RM680_RS07220;old_locus_tag=RM680_07225
NZ_JAVRJI010000007.1	Protein Homology	CDS	71609	72091	.	+	0	ID=cds-WP_001831735.1;Parent=gene-RM680_RS07220;Dbxref=GenBank:WP_001831735.1;Name=WP_001831735.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465404.1;locus_tag=RM680_RS07220;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_001831735.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	72078	73205	.	+	.	ID=gene-RM680_RS07225;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=RM680_RS07225;old_locus_tag=RM680_07230
NZ_JAVRJI010000007.1	Protein Homology	CDS	72078	73205	.	+	0	ID=cds-WP_001831674.1;Parent=gene-RM680_RS07225;Dbxref=GenBank:WP_001831674.1;Name=WP_001831674.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504936.1;locus_tag=RM680_RS07225;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_001831674.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	73206	73910	.	+	.	ID=gene-RM680_RS07230;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=RM680_RS07230;old_locus_tag=RM680_07235
NZ_JAVRJI010000007.1	Protein Homology	CDS	73206	73910	.	+	0	ID=cds-WP_001831723.1;Parent=gene-RM680_RS07230;Dbxref=GenBank:WP_001831723.1;Name=WP_001831723.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499560.1;locus_tag=RM680_RS07230;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001831723.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	73910	74170	.	+	.	ID=gene-RM680_RS07235;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=RM680_RS07235;old_locus_tag=RM680_07240
NZ_JAVRJI010000007.1	Protein Homology	CDS	73910	74170	.	+	0	ID=cds-WP_001831728.1;Parent=gene-RM680_RS07235;Dbxref=GenBank:WP_001831728.1;Name=WP_001831728.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499561.1;locus_tag=RM680_RS07235;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WP_001831728.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	74172	74843	.	+	.	ID=gene-RM680_RS07240;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=RM680_RS07240;old_locus_tag=RM680_07245
NZ_JAVRJI010000007.1	Protein Homology	CDS	74172	74843	.	+	0	ID=cds-WP_001831727.1;Parent=gene-RM680_RS07240;Dbxref=GenBank:WP_001831727.1;Name=WP_001831727.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499562.1;locus_tag=RM680_RS07240;product=phosphoribosylformylglycinamidine synthase I;protein_id=WP_001831727.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	74836	77025	.	+	.	ID=gene-RM680_RS07245;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=RM680_RS07245;old_locus_tag=RM680_07250
NZ_JAVRJI010000007.1	Protein Homology	CDS	74836	77025	.	+	0	ID=cds-WP_002467589.1;Parent=gene-RM680_RS07245;Dbxref=GenBank:WP_002467589.1;Name=WP_002467589.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499563.1;locus_tag=RM680_RS07245;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WP_002467589.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	77004	78488	.	+	.	ID=gene-RM680_RS07250;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=RM680_RS07250;old_locus_tag=RM680_07255
NZ_JAVRJI010000007.1	Protein Homology	CDS	77004	78488	.	+	0	ID=cds-WP_002495589.1;Parent=gene-RM680_RS07250;Dbxref=GenBank:WP_002495589.1;Name=WP_002495589.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499564.1;locus_tag=RM680_RS07250;product=amidophosphoribosyltransferase;protein_id=WP_002495589.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	78481	79512	.	+	.	ID=gene-RM680_RS07255;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=RM680_RS07255;old_locus_tag=RM680_07260
NZ_JAVRJI010000007.1	Protein Homology	CDS	78481	79512	.	+	0	ID=cds-WP_001831685.1;Parent=gene-RM680_RS07255;Dbxref=GenBank:WP_001831685.1;Name=WP_001831685.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831685.1;locus_tag=RM680_RS07255;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_001831685.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	79512	80078	.	+	.	ID=gene-RM680_RS07260;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=RM680_RS07260;old_locus_tag=RM680_07265
NZ_JAVRJI010000007.1	Protein Homology	CDS	79512	80078	.	+	0	ID=cds-WP_001831672.1;Parent=gene-RM680_RS07260;Dbxref=GenBank:WP_001831672.1;Name=WP_001831672.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831672.1;locus_tag=RM680_RS07260;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_001831672.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	80095	81573	.	+	.	ID=gene-RM680_RS07265;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=RM680_RS07265;old_locus_tag=RM680_07270
NZ_JAVRJI010000007.1	Protein Homology	CDS	80095	81573	.	+	0	ID=cds-WP_002485342.1;Parent=gene-RM680_RS07265;Dbxref=GenBank:WP_002485342.1;Name=WP_002485342.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499567.1;locus_tag=RM680_RS07265;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_002485342.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	81599	82840	.	+	.	ID=gene-RM680_RS07270;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=RM680_RS07270;old_locus_tag=RM680_07275
NZ_JAVRJI010000007.1	Protein Homology	CDS	81599	82840	.	+	0	ID=cds-WP_002495588.1;Parent=gene-RM680_RS07270;Dbxref=GenBank:WP_002495588.1;Name=WP_002495588.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831701.1;locus_tag=RM680_RS07270;product=phosphoribosylamine--glycine ligase;protein_id=WP_002495588.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	82973	83779	.	-	.	ID=gene-RM680_RS07275;Name=RM680_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07275;old_locus_tag=RM680_07280
NZ_JAVRJI010000007.1	Protein Homology	CDS	82973	83779	.	-	0	ID=cds-WP_001831682.1;Parent=gene-RM680_RS07275;Dbxref=GenBank:WP_001831682.1;Name=WP_001831682.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464807.1;locus_tag=RM680_RS07275;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_001831682.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	83772	85175	.	-	.	ID=gene-RM680_RS07280;Name=RM680_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07280;old_locus_tag=RM680_07285
NZ_JAVRJI010000007.1	Protein Homology	CDS	83772	85175	.	-	0	ID=cds-WP_311563535.1;Parent=gene-RM680_RS07280;Dbxref=GenBank:WP_311563535.1;Name=WP_311563535.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831678.1;locus_tag=RM680_RS07280;product=ABC transporter ATP-binding protein;protein_id=WP_311563535.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	85189	85764	.	-	.	ID=gene-RM680_RS07285;Name=RM680_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07285;old_locus_tag=RM680_07290
NZ_JAVRJI010000007.1	Protein Homology	CDS	85189	85764	.	-	0	ID=cds-WP_001831663.1;Parent=gene-RM680_RS07285;Dbxref=GenBank:WP_001831663.1;Name=WP_001831663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499571.1;locus_tag=RM680_RS07285;product=ECF transporter S component;protein_id=WP_001831663.1;transl_table=11
NZ_JAVRJI010000007.1	cmsearch	riboswitch	85849	85951	.	-	.	ID=id-NZ_JAVRJI010000007.1:85849..85951;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000007.1	RefSeq	gene	86287	88062	.	+	.	ID=gene-RM680_RS07290;Name=RM680_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07290;old_locus_tag=RM680_07295
NZ_JAVRJI010000007.1	Protein Homology	CDS	86287	88062	.	+	0	ID=cds-WP_311563536.1;Parent=gene-RM680_RS07290;Dbxref=GenBank:WP_311563536.1;Name=WP_311563536.1;Ontology_term=GO:0006631,GO:0050151,GO:0071949;gbkey=CDS;go_function=oleate hydratase activity|0050151||IEA,FAD binding|0071949||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498665.1;locus_tag=RM680_RS07290;product=oleate hydratase;protein_id=WP_311563536.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	88474	88608	.	-	.	ID=gene-RM680_RS07295;Name=graF;gbkey=Gene;gene=graF;gene_biotype=protein_coding;locus_tag=RM680_RS07295;old_locus_tag=RM680_07300
NZ_JAVRJI010000007.1	Protein Homology	CDS	88474	88608	.	-	0	ID=cds-WP_001831711.1;Parent=gene-RM680_RS07295;Dbxref=GenBank:WP_001831711.1;Name=WP_001831711.1;gbkey=CDS;gene=graF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464804.1;locus_tag=RM680_RS07295;product=glycopeptide resistance-associated protein GraF;protein_id=WP_001831711.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	88760	90052	.	+	.	ID=gene-RM680_RS07300;Name=auxA;gbkey=Gene;gene=auxA;gene_biotype=protein_coding;locus_tag=RM680_RS07300;old_locus_tag=RM680_07305
NZ_JAVRJI010000007.1	Protein Homology	CDS	88760	90052	.	+	0	ID=cds-WP_001831698.1;Parent=gene-RM680_RS07300;Dbxref=GenBank:WP_001831698.1;Name=WP_001831698.1;gbkey=CDS;gene=auxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363602.1;locus_tag=RM680_RS07300;product=lipoteichoic acid stability factor AuxA;protein_id=WP_001831698.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	90358	91530	.	+	.	ID=gene-RM680_RS07305;Name=RM680_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07305;old_locus_tag=RM680_07310
NZ_JAVRJI010000007.1	Protein Homology	CDS	90358	91530	.	+	0	ID=cds-WP_002495586.1;Parent=gene-RM680_RS07305;Dbxref=GenBank:WP_002495586.1;Name=WP_002495586.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499575.1;locus_tag=RM680_RS07305;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_002495586.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	91590	92129	.	+	.	ID=gene-RM680_RS07310;Name=RM680_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07310;old_locus_tag=RM680_07315
NZ_JAVRJI010000007.1	Protein Homology	CDS	91590	92129	.	+	0	ID=cds-WP_001831644.1;Parent=gene-RM680_RS07310;Dbxref=GenBank:WP_001831644.1;Name=WP_001831644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500762.1;locus_tag=RM680_RS07310;product=hypothetical protein;protein_id=WP_001831644.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	92285	92551	.	+	.	ID=gene-RM680_RS07315;Name=RM680_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07315;old_locus_tag=RM680_07320
NZ_JAVRJI010000007.1	Protein Homology	CDS	92285	92551	.	+	0	ID=cds-WP_001831726.1;Parent=gene-RM680_RS07315;Dbxref=GenBank:WP_001831726.1;Name=WP_001831726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499577.1;locus_tag=RM680_RS07315;product=phosphocarrier protein HPr;protein_id=WP_001831726.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	92554	94272	.	+	.	ID=gene-RM680_RS07320;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=RM680_RS07320;old_locus_tag=RM680_07325
NZ_JAVRJI010000007.1	Protein Homology	CDS	92554	94272	.	+	0	ID=cds-WP_001831740.1;Parent=gene-RM680_RS07320;Dbxref=GenBank:WP_001831740.1;Name=WP_001831740.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499578.1;locus_tag=RM680_RS07320;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_001831740.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	94547	94783	.	-	.	ID=gene-RM680_RS07325;Name=RM680_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07325;old_locus_tag=RM680_07330
NZ_JAVRJI010000007.1	Protein Homology	CDS	94547	94783	.	-	0	ID=cds-WP_001831684.1;Parent=gene-RM680_RS07325;Dbxref=GenBank:WP_001831684.1;Name=WP_001831684.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831684.1;locus_tag=RM680_RS07325;product=glutaredoxin family protein;protein_id=WP_001831684.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	94984	96339	.	+	.	ID=gene-RM680_RS07330;Name=RM680_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07330;old_locus_tag=RM680_07335
NZ_JAVRJI010000007.1	Protein Homology	CDS	94984	96339	.	+	0	ID=cds-WP_001833075.1;Parent=gene-RM680_RS07330;Dbxref=GenBank:WP_001833075.1;Name=WP_001833075.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474572.1;locus_tag=RM680_RS07330;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_001833075.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	96336	97352	.	+	.	ID=gene-RM680_RS07335;Name=RM680_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07335;old_locus_tag=RM680_07340
NZ_JAVRJI010000007.1	Protein Homology	CDS	96336	97352	.	+	0	ID=cds-WP_002467583.1;Parent=gene-RM680_RS07335;Dbxref=GenBank:WP_002467583.1;Name=WP_002467583.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442138.1;locus_tag=RM680_RS07335;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_002467583.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	97408	98067	.	+	.	ID=gene-RM680_RS07340;Name=RM680_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07340;old_locus_tag=RM680_07345
NZ_JAVRJI010000007.1	Protein Homology	CDS	97408	98067	.	+	0	ID=cds-WP_001831652.1;Parent=gene-RM680_RS07340;Dbxref=GenBank:WP_001831652.1;Name=WP_001831652.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500455.1;locus_tag=RM680_RS07340;product=potassium channel family protein;protein_id=WP_001831652.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	99049	100731	.	-	.	ID=gene-RM680_RS07345;Name=rnjA;gbkey=Gene;gene=rnjA;gene_biotype=protein_coding;locus_tag=RM680_RS07345;old_locus_tag=RM680_07350
NZ_JAVRJI010000007.1	Protein Homology	CDS	99049	100731	.	-	0	ID=cds-WP_001831649.1;Parent=gene-RM680_RS07345;Dbxref=GenBank:WP_001831649.1;Name=WP_001831649.1;gbkey=CDS;gene=rnjA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499584.1;locus_tag=RM680_RS07345;product=ribonuclease J1;protein_id=WP_001831649.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	100731	100949	.	-	.	ID=gene-RM680_RS07350;Name=RM680_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07350;old_locus_tag=RM680_07355
NZ_JAVRJI010000007.1	Protein Homology	CDS	100731	100949	.	-	0	ID=cds-WP_001831646.1;Parent=gene-RM680_RS07350;Dbxref=GenBank:WP_001831646.1;Name=WP_001831646.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499585.1;locus_tag=RM680_RS07350;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WP_001831646.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	101381	101932	.	-	.	ID=gene-RM680_RS07355;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=RM680_RS07355;old_locus_tag=RM680_07360
NZ_JAVRJI010000007.1	Protein Homology	CDS	101381	101932	.	-	0	ID=cds-WP_001831696.1;Parent=gene-RM680_RS07355;Dbxref=GenBank:WP_001831696.1;Name=WP_001831696.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499587.1;locus_tag=RM680_RS07355;product=peptide deformylase;protein_id=WP_001831696.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	102115	102741	.	+	.	ID=gene-RM680_RS07360;Name=RM680_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07360;old_locus_tag=RM680_07365
NZ_JAVRJI010000007.1	Protein Homology	CDS	102115	102741	.	+	0	ID=cds-WP_002486059.1;Parent=gene-RM680_RS07360;Dbxref=GenBank:WP_002486059.1;Name=WP_002486059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464800.1;locus_tag=RM680_RS07360;product=YkyA family protein;protein_id=WP_002486059.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	102912	104024	.	+	.	ID=gene-RM680_RS07365;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=RM680_RS07365;old_locus_tag=RM680_07370
NZ_JAVRJI010000007.1	Protein Homology	CDS	102912	104024	.	+	0	ID=cds-WP_001831653.1;Parent=gene-RM680_RS07365;Dbxref=GenBank:WP_001831653.1;Name=WP_001831653.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=pdhA;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=RM680_RS07365;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_001831653.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	104028	105005	.	+	.	ID=gene-RM680_RS07370;Name=RM680_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07370;old_locus_tag=RM680_07375
NZ_JAVRJI010000007.1	Protein Homology	CDS	104028	105005	.	+	0	ID=cds-WP_001831654.1;Parent=gene-RM680_RS07370;Dbxref=GenBank:WP_001831654.1;Name=WP_001831654.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637695.1;locus_tag=RM680_RS07370;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_001831654.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	105136	106437	.	+	.	ID=gene-RM680_RS07375;Name=RM680_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07375;old_locus_tag=RM680_07380
NZ_JAVRJI010000007.1	Protein Homology	CDS	105136	106437	.	+	0	ID=cds-WP_001831683.1;Parent=gene-RM680_RS07375;Dbxref=GenBank:WP_001831683.1;Name=WP_001831683.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499591.1;locus_tag=RM680_RS07375;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_001831683.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	106442	107848	.	+	.	ID=gene-RM680_RS07380;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=RM680_RS07380;old_locus_tag=RM680_07385
NZ_JAVRJI010000007.1	Protein Homology	CDS	106442	107848	.	+	0	ID=cds-WP_002495585.1;Parent=gene-RM680_RS07380;Dbxref=GenBank:WP_002495585.1;Name=WP_002495585.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383646.1;locus_tag=RM680_RS07380;product=dihydrolipoyl dehydrogenase;protein_id=WP_002495585.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	108150	108428	.	+	.	ID=gene-RM680_RS07385;Name=RM680_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07385;old_locus_tag=RM680_07390
NZ_JAVRJI010000007.1	Protein Homology	CDS	108150	108428	.	+	0	ID=cds-WP_001833064.1;Parent=gene-RM680_RS07385;Dbxref=GenBank:WP_001833064.1;Name=WP_001833064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001833064.1;locus_tag=RM680_RS07385;product=UPF0223 family protein;protein_id=WP_001833064.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	108567	109106	.	+	.	ID=gene-RM680_RS07390;Name=RM680_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07390;old_locus_tag=RM680_07395
NZ_JAVRJI010000007.1	Protein Homology	CDS	108567	109106	.	+	0	ID=cds-WP_002439334.1;Parent=gene-RM680_RS07390;Dbxref=GenBank:WP_002439334.1;Name=WP_002439334.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499594.1;locus_tag=RM680_RS07390;product=helix-turn-helix domain-containing protein;protein_id=WP_002439334.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	109118	110212	.	+	.	ID=gene-RM680_RS07395;Name=RM680_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07395;old_locus_tag=RM680_07400
NZ_JAVRJI010000007.1	Protein Homology	CDS	109118	110212	.	+	0	ID=cds-WP_311563537.1;Parent=gene-RM680_RS07395;Dbxref=GenBank:WP_311563537.1;Name=WP_311563537.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499595.1;locus_tag=RM680_RS07395;product=ABC transporter ATP-binding protein;protein_id=WP_311563537.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	110205	111008	.	+	.	ID=gene-RM680_RS07400;Name=RM680_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07400;old_locus_tag=RM680_07405
NZ_JAVRJI010000007.1	Protein Homology	CDS	110205	111008	.	+	0	ID=cds-WP_001831695.1;Parent=gene-RM680_RS07400;Dbxref=GenBank:WP_001831695.1;Name=WP_001831695.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499596.1;locus_tag=RM680_RS07400;product=ABC transporter permease;protein_id=WP_001831695.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	111014	111826	.	+	.	ID=gene-RM680_RS07405;Name=RM680_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07405;old_locus_tag=RM680_07410
NZ_JAVRJI010000007.1	Protein Homology	CDS	111014	111826	.	+	0	ID=cds-WP_001831717.1;Parent=gene-RM680_RS07405;Dbxref=GenBank:WP_001831717.1;Name=WP_001831717.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505264.1;locus_tag=RM680_RS07405;product=ABC transporter permease;protein_id=WP_001831717.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	111823	112896	.	+	.	ID=gene-RM680_RS07410;Name=RM680_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07410;old_locus_tag=RM680_07415
NZ_JAVRJI010000007.1	Protein Homology	CDS	111823	112896	.	+	0	ID=cds-WP_162152323.1;Parent=gene-RM680_RS07410;Dbxref=GenBank:WP_162152323.1;Name=WP_162152323.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499598.1;locus_tag=RM680_RS07410;product=ABC transporter substrate-binding protein;protein_id=WP_162152323.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	112965	114116	.	+	.	ID=gene-RM680_RS07415;Name=auxB;gbkey=Gene;gene=auxB;gene_biotype=protein_coding;locus_tag=RM680_RS07415;old_locus_tag=RM680_07420
NZ_JAVRJI010000007.1	Protein Homology	CDS	112965	114116	.	+	0	ID=cds-WP_001831714.1;Parent=gene-RM680_RS07415;Dbxref=GenBank:WP_001831714.1;Name=WP_001831714.1;gbkey=CDS;gene=auxB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486531.1;locus_tag=RM680_RS07415;product=lipoteichoic acid stability factor AuxB;protein_id=WP_001831714.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	114421	114957	.	+	.	ID=gene-RM680_RS07420;Name=RM680_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07420;old_locus_tag=RM680_07425
NZ_JAVRJI010000007.1	Protein Homology	CDS	114421	114957	.	+	0	ID=cds-WP_001831659.1;Parent=gene-RM680_RS07420;Dbxref=GenBank:WP_001831659.1;Name=WP_001831659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474561.1;locus_tag=RM680_RS07420;product=DUF4064 domain-containing protein;protein_id=WP_001831659.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	115171	116532	.	-	.	ID=gene-RM680_RS07425;Name=RM680_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07425;old_locus_tag=RM680_07430
NZ_JAVRJI010000007.1	Protein Homology	CDS	115171	116532	.	-	0	ID=cds-WP_002439344.1;Parent=gene-RM680_RS07425;Dbxref=GenBank:WP_002439344.1;Name=WP_002439344.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439344.1;locus_tag=RM680_RS07425;product=Nramp family divalent metal transporter;protein_id=WP_002439344.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	116647	117258	.	-	.	ID=gene-RM680_RS07430;Name=RM680_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07430;old_locus_tag=RM680_07435
NZ_JAVRJI010000007.1	Protein Homology	CDS	116647	117258	.	-	0	ID=cds-WP_001831689.1;Parent=gene-RM680_RS07430;Dbxref=GenBank:WP_001831689.1;Name=WP_001831689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831689.1;locus_tag=RM680_RS07430;product=YktB family protein;protein_id=WP_001831689.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	117435	118256	.	+	.	ID=gene-RM680_RS07435;Name=RM680_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07435;old_locus_tag=RM680_07440
NZ_JAVRJI010000007.1	Protein Homology	CDS	117435	118256	.	+	0	ID=cds-WP_001831667.1;Parent=gene-RM680_RS07435;Dbxref=GenBank:WP_001831667.1;Name=WP_001831667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446183.1;locus_tag=RM680_RS07435;product=inositol monophosphatase family protein;protein_id=WP_001831667.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	118810	119001	.	-	.	ID=gene-RM680_RS07440;Name=RM680_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07440;old_locus_tag=RM680_07445
NZ_JAVRJI010000007.1	Protein Homology	CDS	118810	119001	.	-	0	ID=cds-WP_001831670.1;Parent=gene-RM680_RS07440;Dbxref=GenBank:WP_001831670.1;Name=WP_001831670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008530239.1;locus_tag=RM680_RS07440;product=DUF5325 family protein;protein_id=WP_001831670.1;transl_table=11
NZ_JAVRJI010000007.1	RefSeq	gene	119100	120947	.	+	.	ID=gene-RM680_RS07445;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=RM680_RS07445;old_locus_tag=RM680_07450
NZ_JAVRJI010000007.1	Protein Homology	CDS	119100	120947	.	+	0	ID=cds-WP_001831737.1;Parent=gene-RM680_RS07445;Dbxref=GenBank:WP_001831737.1;Name=WP_001831737.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499605.1;locus_tag=RM680_RS07445;product=translational GTPase TypA;protein_id=WP_001831737.1;transl_table=11
##sequence-region NZ_JAVRJI010000008.1 1 119556
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000008.1	RefSeq	region	1	119556	.	+	.	ID=NZ_JAVRJI010000008.1:1..119556;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000008.1	RefSeq	gene	415	1683	.	-	.	ID=gene-RM680_RS07450;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=RM680_RS07450;old_locus_tag=RM680_07455
NZ_JAVRJI010000008.1	Protein Homology	CDS	415	1683	.	-	0	ID=cds-WP_001830018.1;Parent=gene-RM680_RS07450;Dbxref=GenBank:WP_001830018.1;Name=WP_001830018.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500771.1;locus_tag=RM680_RS07450;product=threonine ammonia-lyase IlvA;protein_id=WP_001830018.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	1698	2267	.	-	.	ID=gene-RM680_RS07455;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=RM680_RS07455;old_locus_tag=RM680_07460
NZ_JAVRJI010000008.1	Protein Homology	CDS	1698	2267	.	-	0	ID=cds-WP_002457053.1;Parent=gene-RM680_RS07455;Dbxref=GenBank:WP_002457053.1;Name=WP_002457053.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497515.1;locus_tag=RM680_RS07455;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_002457053.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	2268	3638	.	-	.	ID=gene-RM680_RS07460;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=RM680_RS07460;old_locus_tag=RM680_07465
NZ_JAVRJI010000008.1	Protein Homology	CDS	2268	3638	.	-	0	ID=cds-WP_002489462.1;Parent=gene-RM680_RS07460;Dbxref=GenBank:WP_002489462.1;Name=WP_002489462.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500769.1;locus_tag=RM680_RS07460;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_002489462.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	3654	4697	.	-	.	ID=gene-RM680_RS07465;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=RM680_RS07465;old_locus_tag=RM680_07470
NZ_JAVRJI010000008.1	Protein Homology	CDS	3654	4697	.	-	0	ID=cds-WP_020368353.1;Parent=gene-RM680_RS07465;Dbxref=GenBank:WP_020368353.1;Name=WP_020368353.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468340.1;locus_tag=RM680_RS07465;product=3-isopropylmalate dehydrogenase;protein_id=WP_020368353.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	4694	6229	.	-	.	ID=gene-RM680_RS07470;Name=RM680_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07470;old_locus_tag=RM680_07475
NZ_JAVRJI010000008.1	Protein Homology	CDS	4694	6229	.	-	0	ID=cds-WP_001830007.1;Parent=gene-RM680_RS07470;Dbxref=GenBank:WP_001830007.1;Name=WP_001830007.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464892.1;locus_tag=RM680_RS07470;product=2-isopropylmalate synthase;protein_id=WP_001830007.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	6252	7256	.	-	.	ID=gene-RM680_RS07475;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=RM680_RS07475;old_locus_tag=RM680_07480
NZ_JAVRJI010000008.1	Protein Homology	CDS	6252	7256	.	-	0	ID=cds-WP_002457057.1;Parent=gene-RM680_RS07475;Dbxref=GenBank:WP_002457057.1;Name=WP_002457057.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500766.1;locus_tag=RM680_RS07475;product=ketol-acid reductoisomerase;protein_id=WP_002457057.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	7373	7606	.	-	.	ID=gene-RM680_RS07480;Name=RM680_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07480;old_locus_tag=RM680_07485
NZ_JAVRJI010000008.1	Protein Homology	CDS	7373	7606	.	-	0	ID=cds-WP_001830009.1;Parent=gene-RM680_RS07480;Dbxref=GenBank:WP_001830009.1;Name=WP_001830009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468346.1;locus_tag=RM680_RS07480;product=ACT domain-containing protein;protein_id=WP_001830009.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	7606	9330	.	-	.	ID=gene-RM680_RS07485;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=RM680_RS07485;old_locus_tag=RM680_07490
NZ_JAVRJI010000008.1	Protein Homology	CDS	7606	9330	.	-	0	ID=cds-WP_044555417.1;Parent=gene-RM680_RS07485;Dbxref=GenBank:WP_044555417.1;Name=WP_044555417.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498148.1;locus_tag=RM680_RS07485;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_044555417.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	9365	11053	.	-	.	ID=gene-RM680_RS07490;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=RM680_RS07490;old_locus_tag=RM680_07495
NZ_JAVRJI010000008.1	Protein Homology	CDS	9365	11053	.	-	0	ID=cds-WP_001830016.1;Parent=gene-RM680_RS07490;Dbxref=GenBank:WP_001830016.1;Name=WP_001830016.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500763.1;locus_tag=RM680_RS07490;product=dihydroxy-acid dehydratase;protein_id=WP_001830016.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	11532	11993	.	+	.	ID=gene-RM680_RS07495;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=RM680_RS07495;old_locus_tag=RM680_07500
NZ_JAVRJI010000008.1	Protein Homology	CDS	11532	11993	.	+	0	ID=cds-WP_002455871.1;Parent=gene-RM680_RS07495;Dbxref=GenBank:WP_002455871.1;Name=WP_002455871.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504032.1;locus_tag=RM680_RS07495;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_002455871.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	11974	12636	.	+	.	ID=gene-RM680_RS07500;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=RM680_RS07500;old_locus_tag=RM680_07505
NZ_JAVRJI010000008.1	Protein Homology	CDS	11974	12636	.	+	0	ID=cds-WP_001832485.1;Parent=gene-RM680_RS07500;Dbxref=GenBank:WP_001832485.1;Name=WP_001832485.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360111.1;locus_tag=RM680_RS07500;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_001832485.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	12609	13070	.	+	.	ID=gene-RM680_RS07505;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=RM680_RS07505;old_locus_tag=RM680_07510
NZ_JAVRJI010000008.1	Protein Homology	CDS	12609	13070	.	+	0	ID=cds-WP_001829994.1;Parent=gene-RM680_RS07505;Dbxref=GenBank:WP_001829994.1;Name=WP_001829994.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495673.1;locus_tag=RM680_RS07505;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_001829994.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	13067	14089	.	+	.	ID=gene-RM680_RS07510;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=RM680_RS07510;old_locus_tag=RM680_07515
NZ_JAVRJI010000008.1	Protein Homology	CDS	13067	14089	.	+	0	ID=cds-WP_001830015.1;Parent=gene-RM680_RS07510;Dbxref=GenBank:WP_001830015.1;Name=WP_001830015.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464894.1;locus_tag=RM680_RS07510;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_001830015.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	14172	15788	.	-	.	ID=gene-RM680_RS07515;Name=RM680_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07515;old_locus_tag=RM680_07520
NZ_JAVRJI010000008.1	Protein Homology	CDS	14172	15788	.	-	0	ID=cds-WP_001832478.1;Parent=gene-RM680_RS07515;Dbxref=GenBank:WP_001832478.1;Name=WP_001832478.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504804.1;locus_tag=RM680_RS07515;product=MutS-related protein;protein_id=WP_001832478.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	16130	18064	.	-	.	ID=gene-RM680_RS07520;Name=RM680_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07520;old_locus_tag=RM680_07525
NZ_JAVRJI010000008.1	Protein Homology	CDS	16130	18064	.	-	0	ID=cds-WP_001830004.1;Parent=gene-RM680_RS07520;Dbxref=GenBank:WP_001830004.1;Name=WP_001830004.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500755.1;locus_tag=RM680_RS07520;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_001830004.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	18412	19047	.	+	.	ID=gene-RM680_RS07525;Name=RM680_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07525;old_locus_tag=RM680_07530
NZ_JAVRJI010000008.1	Protein Homology	CDS	18412	19047	.	+	0	ID=cds-WP_001830017.1;Parent=gene-RM680_RS07525;Dbxref=GenBank:WP_001830017.1;Name=WP_001830017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500754.1;locus_tag=RM680_RS07525;product=redox-sensing transcriptional repressor Rex;protein_id=WP_001830017.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	19193	19474	.	+	.	ID=gene-RM680_RS07530;Name=RM680_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07530;old_locus_tag=RM680_07535
NZ_JAVRJI010000008.1	Protein Homology	CDS	19193	19474	.	+	0	ID=cds-WP_002440364.1;Parent=gene-RM680_RS07530;Dbxref=GenBank:WP_002440364.1;Name=WP_002440364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440364.1;locus_tag=RM680_RS07530;product=hypothetical protein;protein_id=WP_002440364.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	19560	20612	.	+	.	ID=gene-RM680_RS07535;Name=RM680_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07535;old_locus_tag=RM680_07540
NZ_JAVRJI010000008.1	Protein Homology	CDS	19560	20612	.	+	0	ID=cds-WP_001829995.1;Parent=gene-RM680_RS07535;Dbxref=GenBank:WP_001829995.1;Name=WP_001829995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475007.1;locus_tag=RM680_RS07535;product=YeeE/YedE family protein;protein_id=WP_001829995.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	20664	20888	.	+	.	ID=gene-RM680_RS07540;Name=RM680_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07540;old_locus_tag=RM680_07545
NZ_JAVRJI010000008.1	Protein Homology	CDS	20664	20888	.	+	0	ID=cds-WP_001830019.1;Parent=gene-RM680_RS07540;Dbxref=GenBank:WP_001830019.1;Name=WP_001830019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830019.1;locus_tag=RM680_RS07540;product=sulfurtransferase TusA family protein;protein_id=WP_001830019.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	21322	22572	.	+	.	ID=gene-RM680_RS07545;Name=RM680_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07545;old_locus_tag=RM680_07550
NZ_JAVRJI010000008.1	Protein Homology	CDS	21322	22572	.	+	0	ID=cds-WP_002477475.1;Parent=gene-RM680_RS07545;Dbxref=GenBank:WP_002477475.1;Name=WP_002477475.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494644.1;locus_tag=RM680_RS07545;product=ammonium transporter;protein_id=WP_002477475.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	22708	23661	.	+	.	ID=gene-RM680_RS07550;Name=RM680_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07550;old_locus_tag=RM680_07555
NZ_JAVRJI010000008.1	Protein Homology	CDS	22708	23661	.	+	0	ID=cds-WP_002494078.1;Parent=gene-RM680_RS07550;Dbxref=GenBank:WP_002494078.1;Name=WP_002494078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503805.1;locus_tag=RM680_RS07550;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002494078.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	23921	25393	.	+	.	ID=gene-RM680_RS07555;Name=RM680_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07555;old_locus_tag=RM680_07560
NZ_JAVRJI010000008.1	Protein Homology	CDS	23921	25393	.	+	0	ID=cds-WP_002469009.1;Parent=gene-RM680_RS07555;Dbxref=GenBank:WP_002469009.1;Name=WP_002469009.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363476.1;locus_tag=RM680_RS07555;product=sucrose-6-phosphate hydrolase;protein_id=WP_002469009.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	25400	26359	.	+	.	ID=gene-RM680_RS07560;Name=RM680_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07560;old_locus_tag=RM680_07565
NZ_JAVRJI010000008.1	Protein Homology	CDS	25400	26359	.	+	0	ID=cds-WP_311563538.1;Parent=gene-RM680_RS07560;Dbxref=GenBank:WP_311563538.1;Name=WP_311563538.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469008.1;locus_tag=RM680_RS07560;product=carbohydrate kinase family protein;protein_id=WP_311563538.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	26427	27143	.	-	.	ID=gene-RM680_RS07565;Name=agrA;gbkey=Gene;gene=agrA;gene_biotype=protein_coding;locus_tag=RM680_RS07565;old_locus_tag=RM680_07570
NZ_JAVRJI010000008.1	Protein Homology	CDS	26427	27143	.	-	0	ID=cds-WP_001829999.1;Parent=gene-RM680_RS07565;Dbxref=GenBank:WP_001829999.1;Name=WP_001829999.1;gbkey=CDS;gene=agrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1;locus_tag=RM680_RS07565;product=quorum-sensing response regulator AgrA;protein_id=WP_001829999.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	27160	28449	.	-	.	ID=gene-RM680_RS07570;Name=agrC;gbkey=Gene;gene=agrC;gene_biotype=protein_coding;locus_tag=RM680_RS07570;old_locus_tag=RM680_07575
NZ_JAVRJI010000008.1	Protein Homology	CDS	27160	28449	.	-	0	ID=cds-WP_311563539.1;Parent=gene-RM680_RS07570;Dbxref=GenBank:WP_311563539.1;Name=WP_311563539.1;gbkey=CDS;gene=agrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485634.1;locus_tag=RM680_RS07570;product=quorum-sensing sensor histidine kinase AgrC;protein_id=WP_311563539.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	28474	28614	.	-	.	ID=gene-RM680_RS07575;Name=agrD;gbkey=Gene;gene=agrD;gene_biotype=protein_coding;locus_tag=RM680_RS07575;old_locus_tag=RM680_07580
NZ_JAVRJI010000008.1	Protein Homology	CDS	28474	28614	.	-	0	ID=cds-WP_002468352.1;Parent=gene-RM680_RS07575;Dbxref=GenBank:WP_002468352.1;Name=WP_002468352.1;gbkey=CDS;gene=agrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447513.1;locus_tag=RM680_RS07575;product=cyclic lactone autoinducer peptide AgrD;protein_id=WP_002468352.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	28620	29183	.	-	.	ID=gene-RM680_RS07580;Name=RM680_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07580;old_locus_tag=RM680_07585
NZ_JAVRJI010000008.1	Protein Homology	CDS	28620	29183	.	-	0	ID=cds-WP_002485639.1;Parent=gene-RM680_RS07580;Dbxref=GenBank:WP_002485639.1;Name=WP_002485639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491536.1;locus_tag=RM680_RS07580;product=accessory gene regulator AgrB;protein_id=WP_002485639.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	29500	29577	.	+	.	ID=gene-RM680_RS07585;Name=hld;gbkey=Gene;gene=hld;gene_biotype=protein_coding;locus_tag=RM680_RS07585;old_locus_tag=RM680_07590
NZ_JAVRJI010000008.1	Protein Homology	CDS	29500	29577	.	+	0	ID=cds-WP_002494082.1;Parent=gene-RM680_RS07585;Dbxref=GenBank:WP_002494082.1;Name=WP_002494082.1;gbkey=CDS;gene=hld;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494082.1;locus_tag=RM680_RS07585;product=delta-hemolysin;protein_id=WP_002494082.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	29958	30743	.	-	.	ID=gene-RM680_RS07590;Name=RM680_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07590;old_locus_tag=RM680_07595
NZ_JAVRJI010000008.1	Protein Homology	CDS	29958	30743	.	-	0	ID=cds-WP_002474151.1;Parent=gene-RM680_RS07590;Dbxref=GenBank:WP_002474151.1;Name=WP_002474151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363187.1;locus_tag=RM680_RS07590;product=carbon-nitrogen family hydrolase;protein_id=WP_002474151.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	31095	32513	.	+	.	ID=gene-RM680_RS07595;Name=sdrH;gbkey=Gene;gene=sdrH;gene_biotype=protein_coding;locus_tag=RM680_RS07595;old_locus_tag=RM680_07600
NZ_JAVRJI010000008.1	Protein Homology	CDS	31095	32513	.	+	0	ID=cds-WP_311563540.1;Parent=gene-RM680_RS07595;Dbxref=GenBank:WP_311563540.1;Name=WP_311563540.1;gbkey=CDS;gene=sdrH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485139.1;locus_tag=RM680_RS07595;product=MSCRAMM-like protein SdrH;protein_id=WP_311563540.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	32573	33313	.	-	.	ID=gene-RM680_RS07600;Name=mroQ;gbkey=Gene;gene=mroQ;gene_biotype=protein_coding;locus_tag=RM680_RS07600;old_locus_tag=RM680_07605
NZ_JAVRJI010000008.1	Protein Homology	CDS	32573	33313	.	-	0	ID=cds-WP_227532602.1;Parent=gene-RM680_RS07600;Dbxref=GenBank:WP_227532602.1;Name=WP_227532602.1;gbkey=CDS;gene=mroQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467967.1;locus_tag=RM680_RS07600;product=intramembrane glutamic endopeptidase MroQ;protein_id=WP_227532602.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	33488	33772	.	+	.	ID=gene-RM680_RS07605;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=RM680_RS07605;old_locus_tag=RM680_07610
NZ_JAVRJI010000008.1	Protein Homology	CDS	33488	33772	.	+	0	ID=cds-WP_001830378.1;Parent=gene-RM680_RS07605;Dbxref=GenBank:WP_001830378.1;Name=WP_001830378.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500737.1;locus_tag=RM680_RS07605;product=co-chaperone GroES;protein_id=WP_001830378.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	33828	35447	.	+	.	ID=gene-RM680_RS07610;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=RM680_RS07610;old_locus_tag=RM680_07615
NZ_JAVRJI010000008.1	Protein Homology	CDS	33828	35447	.	+	0	ID=cds-WP_311563541.1;Parent=gene-RM680_RS07610;Dbxref=GenBank:WP_311563541.1;Name=WP_311563541.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500736.1;locus_tag=RM680_RS07610;product=chaperonin GroEL;protein_id=WP_311563541.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	35866	36873	.	+	.	ID=gene-RM680_RS07615;Name=RM680_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07615;old_locus_tag=RM680_07620
NZ_JAVRJI010000008.1	Protein Homology	CDS	35866	36873	.	+	0	ID=cds-WP_311563542.1;Parent=gene-RM680_RS07615;Dbxref=GenBank:WP_311563542.1;Name=WP_311563542.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457069.1;locus_tag=RM680_RS07615;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_311563542.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	37301	38587	.	-	.	ID=gene-RM680_RS07620;Name=RM680_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07620;old_locus_tag=RM680_07625
NZ_JAVRJI010000008.1	Protein Homology	CDS	37301	38587	.	-	0	ID=cds-WP_311563555.1;Parent=gene-RM680_RS07620;Dbxref=GenBank:WP_311563555.1;Name=WP_311563555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498971.1;locus_tag=RM680_RS07620;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_311563555.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	38782	38877	.	+	.	ID=gene-RM680_RS12050;Name=RM680_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS12050;old_locus_tag=RM680_07630
NZ_JAVRJI010000008.1	Protein Homology	CDS	38782	38877	.	+	0	ID=cds-WP_002440392.1;Parent=gene-RM680_RS12050;Dbxref=GenBank:WP_002440392.1;Name=WP_002440392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440392.1;locus_tag=RM680_RS12050;product=Trp-rich small protein;protein_id=WP_002440392.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	39064	39234	.	+	.	ID=gene-RM680_RS07630;Name=RM680_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07630;old_locus_tag=RM680_07635
NZ_JAVRJI010000008.1	Protein Homology	CDS	39064	39234	.	+	0	ID=cds-WP_001832481.1;Parent=gene-RM680_RS07630;Dbxref=GenBank:WP_001832481.1;Name=WP_001832481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435928.1;locus_tag=RM680_RS07630;product=SE1626 family protein;protein_id=WP_001832481.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	39553	39930	.	+	.	ID=gene-RM680_RS07635;Name=pmtR;gbkey=Gene;gene=pmtR;gene_biotype=protein_coding;locus_tag=RM680_RS07635;old_locus_tag=RM680_07640
NZ_JAVRJI010000008.1	Protein Homology	CDS	39553	39930	.	+	0	ID=cds-WP_001830364.1;Parent=gene-RM680_RS07635;Dbxref=GenBank:WP_001830364.1;Name=WP_001830364.1;gbkey=CDS;gene=pmtR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469536.1;locus_tag=RM680_RS07635;product=PSM export ABC transporter transcriptional regulator PmtR;protein_id=WP_001830364.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	39930	40844	.	+	.	ID=gene-RM680_RS07640;Name=pmtA;gbkey=Gene;gene=pmtA;gene_biotype=protein_coding;locus_tag=RM680_RS07640;old_locus_tag=RM680_07645
NZ_JAVRJI010000008.1	Protein Homology	CDS	39930	40844	.	+	0	ID=cds-WP_311563543.1;Parent=gene-RM680_RS07640;Dbxref=GenBank:WP_311563543.1;Name=WP_311563543.1;gbkey=CDS;gene=pmtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830432.1;locus_tag=RM680_RS07640;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtA;protein_id=WP_311563543.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	40825	41484	.	+	.	ID=gene-RM680_RS07645;Name=pmtB;gbkey=Gene;gene=pmtB;gene_biotype=protein_coding;locus_tag=RM680_RS07645;old_locus_tag=RM680_07650
NZ_JAVRJI010000008.1	Protein Homology	CDS	40825	41484	.	+	0	ID=cds-WP_002477573.1;Parent=gene-RM680_RS07645;Dbxref=GenBank:WP_002477573.1;Name=WP_002477573.1;gbkey=CDS;gene=pmtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494112.1;locus_tag=RM680_RS07645;product=phenol-soluble modulin export ABC transporter permease subunit PmtB;protein_id=WP_002477573.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	41505	42377	.	+	.	ID=gene-RM680_RS07650;Name=pmtC;gbkey=Gene;gene=pmtC;gene_biotype=protein_coding;locus_tag=RM680_RS07650;old_locus_tag=RM680_07655
NZ_JAVRJI010000008.1	Protein Homology	CDS	41505	42377	.	+	0	ID=cds-WP_311563544.1;Parent=gene-RM680_RS07650;Dbxref=GenBank:WP_311563544.1;Name=WP_311563544.1;gbkey=CDS;gene=pmtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830444.1;locus_tag=RM680_RS07650;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;protein_id=WP_311563544.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	42377	43108	.	+	.	ID=gene-RM680_RS07655;Name=pmtD;gbkey=Gene;gene=pmtD;gene_biotype=protein_coding;locus_tag=RM680_RS07655;old_locus_tag=RM680_07660
NZ_JAVRJI010000008.1	Protein Homology	CDS	42377	43108	.	+	0	ID=cds-WP_002474160.1;Parent=gene-RM680_RS07655;Dbxref=GenBank:WP_002474160.1;Name=WP_002474160.1;gbkey=CDS;gene=pmtD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830379.1;locus_tag=RM680_RS07655;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;protein_id=WP_002474160.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	43239	43802	.	-	.	ID=gene-RM680_RS07660;Name=RM680_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07660;old_locus_tag=RM680_07665
NZ_JAVRJI010000008.1	Protein Homology	CDS	43239	43802	.	-	0	ID=cds-WP_002494114.1;Parent=gene-RM680_RS07660;Dbxref=GenBank:WP_002494114.1;Name=WP_002494114.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477576.1;locus_tag=RM680_RS07660;product=thioredoxin family protein;protein_id=WP_002494114.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	43971	44456	.	+	.	ID=gene-RM680_RS07665;Name=RM680_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07665;old_locus_tag=RM680_07670
NZ_JAVRJI010000008.1	Protein Homology	CDS	43971	44456	.	+	0	ID=cds-WP_311563545.1;Parent=gene-RM680_RS07665;Dbxref=GenBank:WP_311563545.1;Name=WP_311563545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830370.1;locus_tag=RM680_RS07665;product=hypothetical protein;protein_id=WP_311563545.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	44509	45066	.	+	.	ID=gene-RM680_RS07670;Name=RM680_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07670;old_locus_tag=RM680_07675
NZ_JAVRJI010000008.1	Protein Homology	CDS	44509	45066	.	+	0	ID=cds-WP_001830393.1;Parent=gene-RM680_RS07670;Dbxref=GenBank:WP_001830393.1;Name=WP_001830393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830393.1;locus_tag=RM680_RS07670;product=DUF1700 domain-containing protein;protein_id=WP_001830393.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	45063	45899	.	+	.	ID=gene-RM680_RS07675;Name=RM680_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07675;old_locus_tag=RM680_07680
NZ_JAVRJI010000008.1	Protein Homology	CDS	45063	45899	.	+	0	ID=cds-WP_311563546.1;Parent=gene-RM680_RS07675;Dbxref=GenBank:WP_311563546.1;Name=WP_311563546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474157.1;locus_tag=RM680_RS07675;product=DUF4097 family beta strand repeat-containing protein;protein_id=WP_311563546.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	45953	46993	.	-	.	ID=gene-RM680_RS07680;Name=RM680_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07680;old_locus_tag=RM680_07685
NZ_JAVRJI010000008.1	Protein Homology	CDS	45953	46993	.	-	0	ID=cds-WP_017465141.1;Parent=gene-RM680_RS07680;Dbxref=GenBank:WP_017465141.1;Name=WP_017465141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830433.1;locus_tag=RM680_RS07680;product=C45 family autoproteolytic acyltransferase/hydolase;protein_id=WP_017465141.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	47373	47543	.	+	.	ID=gene-RM680_RS07685;Name=RM680_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07685;old_locus_tag=RM680_07690
NZ_JAVRJI010000008.1	Protein Homology	CDS	47373	47543	.	+	0	ID=cds-WP_001830431.1;Parent=gene-RM680_RS07685;Dbxref=GenBank:WP_001830431.1;Name=WP_001830431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361552.1;locus_tag=RM680_RS07685;product=hypothetical protein;protein_id=WP_001830431.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	pseudogene	47737	48039	.	-	.	ID=gene-RM680_RS07690;Name=RM680_RS07690;end_range=48039,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS07690;old_locus_tag=RM680_07695;partial=true;pseudo=true
NZ_JAVRJI010000008.1	Protein Homology	CDS	47737	48039	.	-	0	ID=cds-RM680_RS07690;Parent=gene-RM680_RS07690;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=48039,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447477.1;locus_tag=RM680_RS07690;partial=true;product=YolD-like family protein;pseudo=true;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	48224	49336	.	+	.	ID=gene-RM680_RS07695;Name=RM680_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07695;old_locus_tag=RM680_07700
NZ_JAVRJI010000008.1	Protein Homology	CDS	48224	49336	.	+	0	ID=cds-WP_000706213.1;Parent=gene-RM680_RS07695;Dbxref=GenBank:WP_000706213.1;Name=WP_000706213.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485872.1;locus_tag=RM680_RS07695;product=tyrosine-type recombinase/integrase;protein_id=WP_000706213.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	49339	51402	.	+	.	ID=gene-RM680_RS07700;Name=RM680_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07700;old_locus_tag=RM680_07705
NZ_JAVRJI010000008.1	Protein Homology	CDS	49339	51402	.	+	0	ID=cds-WP_000026850.1;Parent=gene-RM680_RS07700;Dbxref=GenBank:WP_000026850.1;Name=WP_000026850.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000026849.1;locus_tag=RM680_RS07700;product=tyrosine-type recombinase/integrase;protein_id=WP_000026850.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	51411	51776	.	+	.	ID=gene-RM680_RS07705;Name=RM680_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07705;old_locus_tag=RM680_07710
NZ_JAVRJI010000008.1	Protein Homology	CDS	51411	51776	.	+	0	ID=cds-WP_000410574.1;Parent=gene-RM680_RS07705;Dbxref=GenBank:WP_000410574.1;Name=WP_000410574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410574.1;locus_tag=RM680_RS07705;product=DUF6262 family protein;protein_id=WP_000410574.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	51781	53151	.	+	.	ID=gene-RM680_RS07710;Name=RM680_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07710;old_locus_tag=RM680_07715
NZ_JAVRJI010000008.1	Protein Homology	CDS	51781	53151	.	+	0	ID=cds-WP_000368919.1;Parent=gene-RM680_RS07710;Dbxref=GenBank:WP_000368919.1;Name=WP_000368919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500317.1;locus_tag=RM680_RS07710;product=hypothetical protein;protein_id=WP_000368919.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	53194	53604	.	-	.	ID=gene-RM680_RS07715;Name=RM680_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07715;old_locus_tag=RM680_07720
NZ_JAVRJI010000008.1	Protein Homology	CDS	53194	53604	.	-	0	ID=cds-WP_000612779.1;Parent=gene-RM680_RS07715;Dbxref=GenBank:WP_000612779.1;Name=WP_000612779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612779.1;locus_tag=RM680_RS07715;product=YolD-like family protein;protein_id=WP_000612779.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	53918	54763	.	-	.	ID=gene-RM680_RS07720;Name=blaZ;gbkey=Gene;gene=blaZ;gene_biotype=protein_coding;locus_tag=RM680_RS07720;old_locus_tag=RM680_07725
NZ_JAVRJI010000008.1	Protein Homology	CDS	53918	54763	.	-	0	ID=cds-WP_000733622.1;Parent=gene-RM680_RS07720;Dbxref=GenBank:WP_000733622.1;Name=WP_000733622.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaZ;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733274.1;locus_tag=RM680_RS07720;product=penicillin-hydrolyzing class A beta-lactamase BlaZ;protein_id=WP_000733622.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	54870	56627	.	+	.	ID=gene-RM680_RS07725;Name=blaR1;gbkey=Gene;gene=blaR1;gene_biotype=protein_coding;locus_tag=RM680_RS07725;old_locus_tag=RM680_07730
NZ_JAVRJI010000008.1	Protein Homology	CDS	54870	56627	.	+	0	ID=cds-WP_001096371.1;Parent=gene-RM680_RS07725;Dbxref=GenBank:WP_001096371.1;Name=WP_001096371.1;gbkey=CDS;gene=blaR1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096376.1;locus_tag=RM680_RS07725;product=beta-lactam sensor/signal transducer BlaR1;protein_id=WP_001096371.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	56617	56997	.	+	.	ID=gene-RM680_RS07730;Name=blaI;gbkey=Gene;gene=blaI;gene_biotype=protein_coding;locus_tag=RM680_RS07730;old_locus_tag=RM680_07735
NZ_JAVRJI010000008.1	Protein Homology	CDS	56617	56997	.	+	0	ID=cds-WP_001284659.1;Parent=gene-RM680_RS07730;Dbxref=GenBank:WP_001284659.1;Name=WP_001284659.1;Ontology_term=GO:0045892;gbkey=CDS;gene=blaI;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284656.1;locus_tag=RM680_RS07730;product=penicillinase repressor BlaI;protein_id=WP_001284659.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	pseudogene	57085	57186	.	-	.	ID=gene-RM680_RS07735;Name=RM680_RS07735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS07735;old_locus_tag=RM680_07740;partial=true;pseudo=true;start_range=.,57085
NZ_JAVRJI010000008.1	Protein Homology	CDS	57085	57186	.	-	0	ID=cds-RM680_RS07735;Parent=gene-RM680_RS07735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447477.1;locus_tag=RM680_RS07735;partial=true;product=hypothetical protein;pseudo=true;start_range=.,57085;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	57422	58450	.	+	.	ID=gene-RM680_RS07740;Name=pglS;gbkey=Gene;gene=pglS;gene_biotype=protein_coding;gene_synonym=pgl;locus_tag=RM680_RS07740;old_locus_tag=RM680_07745
NZ_JAVRJI010000008.1	Protein Homology	CDS	57422	58450	.	+	0	ID=cds-WP_311563547.1;Parent=gene-RM680_RS07740;Dbxref=GenBank:WP_311563547.1;Name=WP_311563547.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pglS;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468109.1;locus_tag=RM680_RS07740;product=6-phosphogluconolactonase;protein_id=WP_311563547.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	58562	59941	.	-	.	ID=gene-RM680_RS07745;Name=RM680_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07745;old_locus_tag=RM680_07750
NZ_JAVRJI010000008.1	Protein Homology	CDS	58562	59941	.	-	0	ID=cds-WP_311563548.1;Parent=gene-RM680_RS07745;Dbxref=GenBank:WP_311563548.1;Name=WP_311563548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830423.1;locus_tag=RM680_RS07745;product=aldehyde dehydrogenase;protein_id=WP_311563548.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	60241	61170	.	-	.	ID=gene-RM680_RS07750;Name=RM680_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07750;old_locus_tag=RM680_07755
NZ_JAVRJI010000008.1	Protein Homology	CDS	60241	61170	.	-	0	ID=cds-WP_311563549.1;Parent=gene-RM680_RS07750;Dbxref=GenBank:WP_311563549.1;Name=WP_311563549.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500630.1;locus_tag=RM680_RS07750;product=manganese-dependent inorganic pyrophosphatase;protein_id=WP_311563549.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	61225	61779	.	-	.	ID=gene-RM680_RS07755;Name=RM680_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07755;old_locus_tag=RM680_07760
NZ_JAVRJI010000008.1	Protein Homology	CDS	61225	61779	.	-	0	ID=cds-WP_002457081.1;Parent=gene-RM680_RS07755;Dbxref=GenBank:WP_002457081.1;Name=WP_002457081.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464994.1;locus_tag=RM680_RS07755;product=isochorismatase family cysteine hydrolase;protein_id=WP_002457081.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	61971	63068	.	+	.	ID=gene-RM680_RS07760;Name=RM680_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07760;old_locus_tag=RM680_07765
NZ_JAVRJI010000008.1	Protein Homology	CDS	61971	63068	.	+	0	ID=cds-WP_311563550.1;Parent=gene-RM680_RS07760;Dbxref=GenBank:WP_311563550.1;Name=WP_311563550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477581.1;locus_tag=RM680_RS07760;product=glycosyl hydrolase family 28-related protein;protein_id=WP_311563550.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	63173	63331	.	-	.	ID=gene-RM680_RS07765;Name=RM680_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07765;old_locus_tag=RM680_07770
NZ_JAVRJI010000008.1	GeneMarkS-2+	CDS	63173	63331	.	-	0	ID=cds-WP_194086677.1;Parent=gene-RM680_RS07765;Dbxref=GenBank:WP_194086677.1;Name=WP_194086677.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS07765;product=hypothetical protein;protein_id=WP_194086677.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	63664	64467	.	-	.	ID=gene-RM680_RS07770;Name=RM680_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07770;old_locus_tag=RM680_07775
NZ_JAVRJI010000008.1	Protein Homology	CDS	63664	64467	.	-	0	ID=cds-WP_002474164.1;Parent=gene-RM680_RS07770;Dbxref=GenBank:WP_002474164.1;Name=WP_002474164.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447470.1;locus_tag=RM680_RS07770;product=prephenate dehydratase;protein_id=WP_002474164.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	64486	65553	.	-	.	ID=gene-RM680_RS07775;Name=RM680_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07775;old_locus_tag=RM680_07780
NZ_JAVRJI010000008.1	Protein Homology	CDS	64486	65553	.	-	0	ID=cds-WP_002498675.1;Parent=gene-RM680_RS07775;Dbxref=GenBank:WP_002498675.1;Name=WP_002498675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470334.1;locus_tag=RM680_RS07775;product=nitric oxide synthase oxygenase;protein_id=WP_002498675.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	65745	67214	.	+	.	ID=gene-RM680_RS07780;Name=RM680_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07780;old_locus_tag=RM680_07785
NZ_JAVRJI010000008.1	Protein Homology	CDS	65745	67214	.	+	0	ID=cds-WP_002474162.1;Parent=gene-RM680_RS07780;Dbxref=GenBank:WP_002474162.1;Name=WP_002474162.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500623.2;locus_tag=RM680_RS07780;product=nicotinate phosphoribosyltransferase;protein_id=WP_002474162.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	67207	68034	.	+	.	ID=gene-RM680_RS07785;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=RM680_RS07785;old_locus_tag=RM680_07790
NZ_JAVRJI010000008.1	Protein Homology	CDS	67207	68034	.	+	0	ID=cds-WP_002474181.1;Parent=gene-RM680_RS07785;Dbxref=GenBank:WP_002474181.1;Name=WP_002474181.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455874.1;locus_tag=RM680_RS07785;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_002474181.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	68108	68734	.	+	.	ID=gene-RM680_RS07790;Name=RM680_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07790;old_locus_tag=RM680_07795
NZ_JAVRJI010000008.1	Protein Homology	CDS	68108	68734	.	+	0	ID=cds-WP_002489902.1;Parent=gene-RM680_RS07790;Dbxref=GenBank:WP_002489902.1;Name=WP_002489902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489902.1;locus_tag=RM680_RS07790;product=DUF2179 domain-containing protein;protein_id=WP_002489902.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	68718	68897	.	+	.	ID=gene-RM680_RS07795;Name=RM680_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07795;old_locus_tag=RM680_07800
NZ_JAVRJI010000008.1	Protein Homology	CDS	68718	68897	.	+	0	ID=cds-WP_002498672.1;Parent=gene-RM680_RS07795;Dbxref=GenBank:WP_002498672.1;Name=WP_002498672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447465.1;locus_tag=RM680_RS07795;product=NETI motif-containing protein;protein_id=WP_002498672.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	69309	70604	.	+	.	ID=gene-RM680_RS07800;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=RM680_RS07800;old_locus_tag=RM680_07805
NZ_JAVRJI010000008.1	Protein Homology	CDS	69309	70604	.	+	0	ID=cds-WP_002440416.1;Parent=gene-RM680_RS07800;Dbxref=GenBank:WP_002440416.1;Name=WP_002440416.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500617.1;locus_tag=RM680_RS07800;product=adenylosuccinate lyase;protein_id=WP_002440416.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	70729	71031	.	+	.	ID=gene-RM680_RS07805;Name=RM680_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07805;old_locus_tag=RM680_07810
NZ_JAVRJI010000008.1	Protein Homology	CDS	70729	71031	.	+	0	ID=cds-WP_001830443.1;Parent=gene-RM680_RS07805;Dbxref=GenBank:WP_001830443.1;Name=WP_001830443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830443.1;locus_tag=RM680_RS07805;product=YerC/YecD family TrpR-related protein;protein_id=WP_001830443.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	71355	72047	.	+	.	ID=gene-RM680_RS07810;Name=RM680_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07810;old_locus_tag=RM680_07815
NZ_JAVRJI010000008.1	Protein Homology	CDS	71355	72047	.	+	0	ID=cds-WP_311563551.1;Parent=gene-RM680_RS07810;Dbxref=GenBank:WP_311563551.1;Name=WP_311563551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490295.1;locus_tag=RM680_RS07810;product=heptaprenylglyceryl phosphate synthase;protein_id=WP_311563551.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	72044	74233	.	+	.	ID=gene-RM680_RS07815;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=RM680_RS07815;old_locus_tag=RM680_07820
NZ_JAVRJI010000008.1	Protein Homology	CDS	72044	74233	.	+	0	ID=cds-WP_311563552.1;Parent=gene-RM680_RS07815;Dbxref=GenBank:WP_311563552.1;Name=WP_311563552.1;Ontology_term=GO:0006260,GO:0006281,GO:0003678,GO:0005737;gbkey=CDS;gene=pcrA;go_component=cytoplasm|0005737||IEA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457083.1;locus_tag=RM680_RS07815;product=DNA helicase PcrA;protein_id=WP_311563552.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	74237	76234	.	+	.	ID=gene-RM680_RS07820;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=RM680_RS07820;old_locus_tag=RM680_07825
NZ_JAVRJI010000008.1	Protein Homology	CDS	74237	76234	.	+	0	ID=cds-WP_002440422.1;Parent=gene-RM680_RS07820;Dbxref=GenBank:WP_002440422.1;Name=WP_002440422.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020359868.1;locus_tag=RM680_RS07820;product=NAD-dependent DNA ligase LigA;protein_id=WP_002440422.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	76254	77462	.	+	.	ID=gene-RM680_RS07825;Name=RM680_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07825;old_locus_tag=RM680_07830
NZ_JAVRJI010000008.1	Protein Homology	CDS	76254	77462	.	+	0	ID=cds-WP_001830442.1;Parent=gene-RM680_RS07825;Dbxref=GenBank:WP_001830442.1;Name=WP_001830442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500612.1;locus_tag=RM680_RS07825;product=CamS family sex pheromone protein;protein_id=WP_001830442.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	77789	79324	.	-	.	ID=gene-RM680_RS07830;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=RM680_RS07830;old_locus_tag=RM680_07835
NZ_JAVRJI010000008.1	Protein Homology	CDS	77789	79324	.	-	0	ID=cds-WP_311563553.1;Parent=gene-RM680_RS07830;Dbxref=GenBank:WP_311563553.1;Name=WP_311563553.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458554.1;locus_tag=RM680_RS07830;product=sodium/proline symporter PutP;protein_id=WP_311563553.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	79702	80004	.	+	.	ID=gene-RM680_RS07835;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=RM680_RS07835;old_locus_tag=RM680_07840
NZ_JAVRJI010000008.1	Protein Homology	CDS	79702	80004	.	+	0	ID=cds-WP_002457086.1;Parent=gene-RM680_RS07835;Dbxref=GenBank:WP_002457086.1;Name=WP_002457086.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500610.1;locus_tag=RM680_RS07835;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_002457086.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	80006	81463	.	+	.	ID=gene-RM680_RS07840;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=RM680_RS07840;old_locus_tag=RM680_07845
NZ_JAVRJI010000008.1	Protein Homology	CDS	80006	81463	.	+	0	ID=cds-WP_002458553.1;Parent=gene-RM680_RS07840;Dbxref=GenBank:WP_002458553.1;Name=WP_002458553.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500609.1;locus_tag=RM680_RS07840;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_002458553.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	81476	82903	.	+	.	ID=gene-RM680_RS07845;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=RM680_RS07845;old_locus_tag=RM680_07850
NZ_JAVRJI010000008.1	Protein Homology	CDS	81476	82903	.	+	0	ID=cds-WP_002457087.1;Parent=gene-RM680_RS07845;Dbxref=GenBank:WP_002457087.1;Name=WP_002457087.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453613.1;locus_tag=RM680_RS07845;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_002457087.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	83128	84078	.	+	.	ID=gene-RM680_RS07850;Name=RM680_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07850;old_locus_tag=RM680_07855
NZ_JAVRJI010000008.1	Protein Homology	CDS	83128	84078	.	+	0	ID=cds-WP_002473921.1;Parent=gene-RM680_RS07850;Dbxref=GenBank:WP_002473921.1;Name=WP_002473921.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475849.1;locus_tag=RM680_RS07850;product=diacylglycerol kinase;protein_id=WP_002473921.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	84158	85528	.	+	.	ID=gene-RM680_RS07855;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=RM680_RS07855;old_locus_tag=RM680_07860
NZ_JAVRJI010000008.1	Protein Homology	CDS	84158	85528	.	+	0	ID=cds-WP_311563554.1;Parent=gene-RM680_RS07855;Dbxref=GenBank:WP_311563554.1;Name=WP_311563554.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363302.1;locus_tag=RM680_RS07855;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_311563554.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	85672	86214	.	+	.	ID=gene-RM680_RS07860;Name=RM680_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07860;old_locus_tag=RM680_07865
NZ_JAVRJI010000008.1	Protein Homology	CDS	85672	86214	.	+	0	ID=cds-WP_017465003.1;Parent=gene-RM680_RS07860;Dbxref=GenBank:WP_017465003.1;Name=WP_017465003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465003.1;locus_tag=RM680_RS07860;product=DUF3267 domain-containing protein;protein_id=WP_017465003.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	86525	87595	.	+	.	ID=gene-RM680_RS07865;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=RM680_RS07865;old_locus_tag=RM680_07870
NZ_JAVRJI010000008.1	Protein Homology	CDS	86525	87595	.	+	0	ID=cds-WP_064206396.1;Parent=gene-RM680_RS07865;Dbxref=GenBank:WP_064206396.1;Name=WP_064206396.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302771.1;locus_tag=RM680_RS07865;product=DNA polymerase IV;protein_id=WP_064206396.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	87626	88180	.	-	.	ID=gene-RM680_RS07870;Name=RM680_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07870;old_locus_tag=RM680_07875
NZ_JAVRJI010000008.1	Protein Homology	CDS	87626	88180	.	-	0	ID=cds-WP_002473920.1;Parent=gene-RM680_RS07870;Dbxref=GenBank:WP_002473920.1;Name=WP_002473920.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500602.1;locus_tag=RM680_RS07870;product=3'-5' exonuclease;protein_id=WP_002473920.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	88369	88869	.	-	.	ID=gene-RM680_RS07875;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=RM680_RS07875;old_locus_tag=RM680_07880
NZ_JAVRJI010000008.1	Protein Homology	CDS	88369	88869	.	-	0	ID=cds-WP_001830392.1;Parent=gene-RM680_RS07875;Dbxref=GenBank:WP_001830392.1;Name=WP_001830392.1;gbkey=CDS;gene=ftnA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500600.1;locus_tag=RM680_RS07875;product=H-type ferritin FtnA;protein_id=WP_001830392.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	89091	90404	.	+	.	ID=gene-RM680_RS07880;Name=RM680_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07880;old_locus_tag=RM680_07885
NZ_JAVRJI010000008.1	Protein Homology	CDS	89091	90404	.	+	0	ID=cds-WP_017465004.1;Parent=gene-RM680_RS07880;Dbxref=GenBank:WP_017465004.1;Name=WP_017465004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500599.1;locus_tag=RM680_RS07880;product=Mur ligase family protein;protein_id=WP_017465004.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	90406	91131	.	+	.	ID=gene-RM680_RS07885;Name=RM680_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07885;old_locus_tag=RM680_07890
NZ_JAVRJI010000008.1	Protein Homology	CDS	90406	91131	.	+	0	ID=cds-WP_064206394.1;Parent=gene-RM680_RS07885;Dbxref=GenBank:WP_064206394.1;Name=WP_064206394.1;Ontology_term=GO:0004359;gbkey=CDS;go_function=glutaminase activity|0004359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447447.1;locus_tag=RM680_RS07885;product=type 1 glutamine amidotransferase;protein_id=WP_064206394.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	91572	92108	.	+	.	ID=gene-RM680_RS07890;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM680_RS07890;old_locus_tag=RM680_07895
NZ_JAVRJI010000008.1	Protein Homology	CDS	91572	92108	.	+	0	ID=cds-WP_001830372.1;Parent=gene-RM680_RS07890;Dbxref=GenBank:WP_001830372.1;Name=WP_001830372.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830372.1;locus_tag=RM680_RS07890;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_001830372.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	92259	93245	.	-	.	ID=gene-RM680_RS07895;Name=RM680_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07895;old_locus_tag=RM680_07900
NZ_JAVRJI010000008.1	Protein Homology	CDS	92259	93245	.	-	0	ID=cds-WP_002457091.1;Parent=gene-RM680_RS07895;Dbxref=GenBank:WP_002457091.1;Name=WP_002457091.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494125.1;locus_tag=RM680_RS07895;product=FUSC family protein;protein_id=WP_002457091.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	93419	94174	.	+	.	ID=gene-RM680_RS07900;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=RM680_RS07900;old_locus_tag=RM680_07905
NZ_JAVRJI010000008.1	Protein Homology	CDS	93419	94174	.	+	0	ID=cds-WP_002457092.1;Parent=gene-RM680_RS07900;Dbxref=GenBank:WP_002457092.1;Name=WP_002457092.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830397.1;locus_tag=RM680_RS07900;product=type I methionyl aminopeptidase;protein_id=WP_002457092.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	94332	94718	.	+	.	ID=gene-RM680_RS07905;Name=RM680_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07905;old_locus_tag=RM680_07910
NZ_JAVRJI010000008.1	Protein Homology	CDS	94332	94718	.	+	0	ID=cds-WP_001830382.1;Parent=gene-RM680_RS07905;Dbxref=GenBank:WP_001830382.1;Name=WP_001830382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458548.1;locus_tag=RM680_RS07905;product=hypothetical protein;protein_id=WP_001830382.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	94733	95434	.	+	.	ID=gene-RM680_RS07910;Name=vraT;gbkey=Gene;gene=vraT;gene_biotype=protein_coding;locus_tag=RM680_RS07910;old_locus_tag=RM680_07915
NZ_JAVRJI010000008.1	Protein Homology	CDS	94733	95434	.	+	0	ID=cds-WP_002457093.1;Parent=gene-RM680_RS07910;Dbxref=GenBank:WP_002457093.1;Name=WP_002457093.1;gbkey=CDS;gene=vraT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500591.1;locus_tag=RM680_RS07910;product=cell wall-active antibiotics response protein VraT;protein_id=WP_002457093.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	95431	96477	.	+	.	ID=gene-RM680_RS07915;Name=vraS;gbkey=Gene;gene=vraS;gene_biotype=protein_coding;locus_tag=RM680_RS07915;old_locus_tag=RM680_07920
NZ_JAVRJI010000008.1	Protein Homology	CDS	95431	96477	.	+	0	ID=cds-WP_001830374.1;Parent=gene-RM680_RS07915;Dbxref=GenBank:WP_001830374.1;Name=WP_001830374.1;gbkey=CDS;gene=vraS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275375.1;locus_tag=RM680_RS07915;product=sensor histidine kinase VraS;protein_id=WP_001830374.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	96467	97096	.	+	.	ID=gene-RM680_RS07920;Name=vraR;gbkey=Gene;gene=vraR;gene_biotype=protein_coding;locus_tag=RM680_RS07920;old_locus_tag=RM680_07925
NZ_JAVRJI010000008.1	Protein Homology	CDS	96467	97096	.	+	0	ID=cds-WP_001830439.1;Parent=gene-RM680_RS07920;Dbxref=GenBank:WP_001830439.1;Name=WP_001830439.1;gbkey=CDS;gene=vraR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500589.1;locus_tag=RM680_RS07920;product=response regulator transcription factor VraR;protein_id=WP_001830439.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	97153	98331	.	-	.	ID=gene-RM680_RS07925;Name=RM680_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07925;old_locus_tag=RM680_07930
NZ_JAVRJI010000008.1	Protein Homology	CDS	97153	98331	.	-	0	ID=cds-WP_001830411.1;Parent=gene-RM680_RS07925;Dbxref=GenBank:WP_001830411.1;Name=WP_001830411.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485151.1;locus_tag=RM680_RS07925;product=YihY/virulence factor BrkB family protein;protein_id=WP_001830411.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	98738	99022	.	-	.	ID=gene-RM680_RS07930;Name=RM680_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07930;old_locus_tag=RM680_07935
NZ_JAVRJI010000008.1	Protein Homology	CDS	98738	99022	.	-	0	ID=cds-WP_001830401.1;Parent=gene-RM680_RS07930;Dbxref=GenBank:WP_001830401.1;Name=WP_001830401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435890.1;locus_tag=RM680_RS07930;product=YtxH domain-containing protein;protein_id=WP_001830401.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	99030	99494	.	-	.	ID=gene-RM680_RS07935;Name=RM680_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07935;old_locus_tag=RM680_07940
NZ_JAVRJI010000008.1	Protein Homology	CDS	99030	99494	.	-	0	ID=cds-WP_001830437.1;Parent=gene-RM680_RS07935;Dbxref=GenBank:WP_001830437.1;Name=WP_001830437.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002957213.1;locus_tag=RM680_RS07935;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_001830437.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	99635	99850	.	+	.	ID=gene-RM680_RS07940;Name=RM680_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07940;old_locus_tag=RM680_07945
NZ_JAVRJI010000008.1	Protein Homology	CDS	99635	99850	.	+	0	ID=cds-WP_001830421.1;Parent=gene-RM680_RS07940;Dbxref=GenBank:WP_001830421.1;Name=WP_001830421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494128.1;locus_tag=RM680_RS07940;product=DUF1128 domain-containing protein;protein_id=WP_001830421.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	99852	101093	.	+	.	ID=gene-RM680_RS07945;Name=RM680_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07945;old_locus_tag=RM680_07950
NZ_JAVRJI010000008.1	Protein Homology	CDS	99852	101093	.	+	0	ID=cds-WP_002457094.1;Parent=gene-RM680_RS07945;Dbxref=GenBank:WP_002457094.1;Name=WP_002457094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494624.1;locus_tag=RM680_RS07945;product=aminopeptidase;protein_id=WP_002457094.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	101173	101703	.	+	.	ID=gene-RM680_RS07950;Name=RM680_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07950;old_locus_tag=RM680_07955
NZ_JAVRJI010000008.1	Protein Homology	CDS	101173	101703	.	+	0	ID=cds-WP_001830371.1;Parent=gene-RM680_RS07950;Dbxref=GenBank:WP_001830371.1;Name=WP_001830371.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830371.1;locus_tag=RM680_RS07950;product=acyl-CoA thioesterase;protein_id=WP_001830371.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	101840	102982	.	-	.	ID=gene-RM680_RS07955;Name=yfkAB;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=RM680_RS07955;old_locus_tag=RM680_07960
NZ_JAVRJI010000008.1	Protein Homology	CDS	101840	102982	.	-	0	ID=cds-WP_001830386.1;Parent=gene-RM680_RS07955;Dbxref=GenBank:WP_001830386.1;Name=WP_001830386.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;gene=yfkAB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458544.1;locus_tag=RM680_RS07955;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=WP_001830386.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	103141	103302	.	+	.	ID=gene-RM680_RS07960;Name=RM680_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07960;old_locus_tag=RM680_07965
NZ_JAVRJI010000008.1	Protein Homology	CDS	103141	103302	.	+	0	ID=cds-WP_001830395.1;Parent=gene-RM680_RS07960;Dbxref=GenBank:WP_001830395.1;Name=WP_001830395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500511.1;locus_tag=RM680_RS07960;product=SE1561 family protein;protein_id=WP_001830395.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	103602	104120	.	+	.	ID=gene-RM680_RS07965;Name=RM680_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07965;old_locus_tag=RM680_07970
NZ_JAVRJI010000008.1	Protein Homology	CDS	103602	104120	.	+	0	ID=cds-WP_001830414.1;Parent=gene-RM680_RS07965;Dbxref=GenBank:WP_001830414.1;Name=WP_001830414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303361.1;locus_tag=RM680_RS07965;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_001830414.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	104441	105250	.	+	.	ID=gene-RM680_RS07970;Name=sgtB;gbkey=Gene;gene=sgtB;gene_biotype=protein_coding;locus_tag=RM680_RS07970;old_locus_tag=RM680_07975
NZ_JAVRJI010000008.1	Protein Homology	CDS	104441	105250	.	+	0	ID=cds-WP_001830409.1;Parent=gene-RM680_RS07970;Dbxref=GenBank:WP_001830409.1;Name=WP_001830409.1;gbkey=CDS;gene=sgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830409.1;locus_tag=RM680_RS07970;product=monofunctional peptidoglycan glycosyltransferase SgtB;protein_id=WP_001830409.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	105528	106331	.	+	.	ID=gene-RM680_RS07975;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=RM680_RS07975;old_locus_tag=RM680_07980
NZ_JAVRJI010000008.1	Protein Homology	CDS	105528	106331	.	+	0	ID=cds-WP_001830417.1;Parent=gene-RM680_RS07975;Dbxref=GenBank:WP_001830417.1;Name=WP_001830417.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477604.1;locus_tag=RM680_RS07975;product=recombination regulator RecX;protein_id=WP_001830417.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	106324	106638	.	+	.	ID=gene-RM680_RS07980;Name=RM680_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07980;old_locus_tag=RM680_07985
NZ_JAVRJI010000008.1	Protein Homology	CDS	106324	106638	.	+	0	ID=cds-WP_001830430.1;Parent=gene-RM680_RS07980;Dbxref=GenBank:WP_001830430.1;Name=WP_001830430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830430.1;locus_tag=RM680_RS07980;product=YfhH family protein;protein_id=WP_001830430.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	106654	108171	.	+	.	ID=gene-RM680_RS07985;Name=RM680_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07985;old_locus_tag=RM680_07990
NZ_JAVRJI010000008.1	Protein Homology	CDS	106654	108171	.	+	0	ID=cds-WP_001830434.1;Parent=gene-RM680_RS07985;Dbxref=GenBank:WP_001830434.1;Name=WP_001830434.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501580.1;locus_tag=RM680_RS07985;product=ATP-binding cassette domain-containing protein;protein_id=WP_001830434.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	108180	109010	.	+	.	ID=gene-RM680_RS07990;Name=RM680_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07990;old_locus_tag=RM680_07995
NZ_JAVRJI010000008.1	Protein Homology	CDS	108180	109010	.	+	0	ID=cds-WP_002457095.1;Parent=gene-RM680_RS07990;Dbxref=GenBank:WP_002457095.1;Name=WP_002457095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503588.1;locus_tag=RM680_RS07990;product=hypothetical protein;protein_id=WP_002457095.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	109196	110170	.	-	.	ID=gene-RM680_RS07995;Name=RM680_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS07995;old_locus_tag=RM680_08000
NZ_JAVRJI010000008.1	Protein Homology	CDS	109196	110170	.	-	0	ID=cds-WP_001830424.1;Parent=gene-RM680_RS07995;Dbxref=GenBank:WP_001830424.1;Name=WP_001830424.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503589.1;locus_tag=RM680_RS07995;product=metal-dependent hydrolase;protein_id=WP_001830424.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	110351	111394	.	+	.	ID=gene-RM680_RS08000;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=RM680_RS08000;old_locus_tag=RM680_08005
NZ_JAVRJI010000008.1	Protein Homology	CDS	110351	111394	.	+	0	ID=cds-WP_001830413.1;Parent=gene-RM680_RS08000;Dbxref=GenBank:WP_001830413.1;Name=WP_001830413.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458540.1;locus_tag=RM680_RS08000;product=A/G-specific adenine glycosylase;protein_id=WP_001830413.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	111501	112043	.	+	.	ID=gene-RM680_RS08005;Name=ntdP;gbkey=Gene;gene=ntdP;gene_biotype=protein_coding;locus_tag=RM680_RS08005;old_locus_tag=RM680_08010
NZ_JAVRJI010000008.1	Protein Homology	CDS	111501	112043	.	+	0	ID=cds-WP_001830384.1;Parent=gene-RM680_RS08005;Dbxref=GenBank:WP_001830384.1;Name=WP_001830384.1;Ontology_term=GO:0009116,GO:0017110,GO:0017111;gbkey=CDS;gene=ntdP;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500501.1;locus_tag=RM680_RS08005;product=nucleoside tri-diphosphate phosphatase;protein_id=WP_001830384.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	112285	114021	.	+	.	ID=gene-RM680_RS08010;Name=RM680_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08010;old_locus_tag=RM680_08015
NZ_JAVRJI010000008.1	Protein Homology	CDS	112285	114021	.	+	0	ID=cds-WP_001830383.1;Parent=gene-RM680_RS08010;Dbxref=GenBank:WP_001830383.1;Name=WP_001830383.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500500.1;locus_tag=RM680_RS08010;product=ABC transporter ATP-binding protein;protein_id=WP_001830383.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	114181	115275	.	-	.	ID=gene-RM680_RS08015;Name=RM680_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08015;old_locus_tag=RM680_08020
NZ_JAVRJI010000008.1	Protein Homology	CDS	114181	115275	.	-	0	ID=cds-WP_002457098.1;Parent=gene-RM680_RS08015;Dbxref=GenBank:WP_002457098.1;Name=WP_002457098.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484893.1;locus_tag=RM680_RS08015;product=FUSC family protein;protein_id=WP_002457098.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	115582	116871	.	-	.	ID=gene-RM680_RS08020;Name=RM680_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08020;old_locus_tag=RM680_08025
NZ_JAVRJI010000008.1	Protein Homology	CDS	115582	116871	.	-	0	ID=cds-WP_001830429.1;Parent=gene-RM680_RS08020;Dbxref=GenBank:WP_001830429.1;Name=WP_001830429.1;Ontology_term=GO:0033014,GO:0030170,GO:0042286;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500497.2;locus_tag=RM680_RS08020;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_001830429.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	116952	117410	.	+	.	ID=gene-RM680_RS08025;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=RM680_RS08025;old_locus_tag=RM680_08030
NZ_JAVRJI010000008.1	Protein Homology	CDS	116952	117410	.	+	0	ID=cds-WP_001830449.1;Parent=gene-RM680_RS08025;Dbxref=GenBank:WP_001830449.1;Name=WP_001830449.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498651.1;locus_tag=RM680_RS08025;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_001830449.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	117413	118363	.	+	.	ID=gene-RM680_RS08030;Name=RM680_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08030;old_locus_tag=RM680_08035
NZ_JAVRJI010000008.1	Protein Homology	CDS	117413	118363	.	+	0	ID=cds-WP_002457099.1;Parent=gene-RM680_RS08030;Dbxref=GenBank:WP_002457099.1;Name=WP_002457099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020365541.1;locus_tag=RM680_RS08030;product=phosphoglycerate dehydrogenase;protein_id=WP_002457099.1;transl_table=11
NZ_JAVRJI010000008.1	RefSeq	gene	118459	118911	.	+	.	ID=gene-RM680_RS08035;Name=perR;gbkey=Gene;gene=perR;gene_biotype=protein_coding;locus_tag=RM680_RS08035;old_locus_tag=RM680_08040
NZ_JAVRJI010000008.1	Protein Homology	CDS	118459	118911	.	+	0	ID=cds-WP_001830391.1;Parent=gene-RM680_RS08035;Dbxref=GenBank:WP_001830391.1;Name=WP_001830391.1;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473927.1;locus_tag=RM680_RS08035;product=peroxide-responsive transcriptional repressor PerR;protein_id=WP_001830391.1;transl_table=11
##sequence-region NZ_JAVRJI010000009.1 1 110105
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000009.1	RefSeq	region	1	110105	.	+	.	ID=NZ_JAVRJI010000009.1:1..110105;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000009.1	RefSeq	gene	303	2369	.	-	.	ID=gene-RM680_RS08040;Name=gehC;gbkey=Gene;gene=gehC;gene_biotype=protein_coding;locus_tag=RM680_RS08040;old_locus_tag=RM680_08045
NZ_JAVRJI010000009.1	Protein Homology	CDS	303	2369	.	-	0	ID=cds-WP_002437845.1;Parent=gene-RM680_RS08040;Dbxref=GenBank:WP_002437845.1;Name=WP_002437845.1;gbkey=CDS;gene=gehC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505851.1;locus_tag=RM680_RS08040;product=YSIRK domain-containing triacylglycerol lipase GehC;protein_id=WP_002437845.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	2775	3560	.	+	.	ID=gene-RM680_RS08045;Name=RM680_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08045;old_locus_tag=RM680_08050
NZ_JAVRJI010000009.1	Protein Homology	CDS	2775	3560	.	+	0	ID=cds-WP_001829426.1;Parent=gene-RM680_RS08045;Dbxref=GenBank:WP_001829426.1;Name=WP_001829426.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829426.1;locus_tag=RM680_RS08045;product=arylamine N-acetyltransferase family protein;protein_id=WP_001829426.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	3669	4304	.	-	.	ID=gene-RM680_RS08050;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=RM680_RS08050;old_locus_tag=RM680_08055
NZ_JAVRJI010000009.1	Protein Homology	CDS	3669	4304	.	-	0	ID=cds-WP_001829420.1;Parent=gene-RM680_RS08050;Dbxref=GenBank:WP_001829420.1;Name=WP_001829420.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494590.1;locus_tag=RM680_RS08050;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_001829420.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	4301	5059	.	-	.	ID=gene-RM680_RS08055;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=RM680_RS08055;old_locus_tag=RM680_08060
NZ_JAVRJI010000009.1	Protein Homology	CDS	4301	5059	.	-	0	ID=cds-WP_001829431.1;Parent=gene-RM680_RS08055;Dbxref=GenBank:WP_001829431.1;Name=WP_001829431.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458065.1;locus_tag=RM680_RS08055;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_001829431.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	5056	5760	.	-	.	ID=gene-RM680_RS08060;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=RM680_RS08060;old_locus_tag=RM680_08065
NZ_JAVRJI010000009.1	Protein Homology	CDS	5056	5760	.	-	0	ID=cds-WP_001829444.1;Parent=gene-RM680_RS08060;Dbxref=GenBank:WP_001829444.1;Name=WP_001829444.1;gbkey=CDS;gene=hisA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487522.1;locus_tag=RM680_RS08060;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=WP_001829444.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	5753	6331	.	-	.	ID=gene-RM680_RS08065;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=RM680_RS08065;old_locus_tag=RM680_08070
NZ_JAVRJI010000009.1	Protein Homology	CDS	5753	6331	.	-	0	ID=cds-WP_001829439.1;Parent=gene-RM680_RS08065;Dbxref=GenBank:WP_001829439.1;Name=WP_001829439.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470289.1;locus_tag=RM680_RS08065;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_001829439.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	6328	6906	.	-	.	ID=gene-RM680_RS08070;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=RM680_RS08070;old_locus_tag=RM680_08075
NZ_JAVRJI010000009.1	Protein Homology	CDS	6328	6906	.	-	0	ID=cds-WP_311563557.1;Parent=gene-RM680_RS08070;Dbxref=GenBank:WP_311563557.1;Name=WP_311563557.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437839.1;locus_tag=RM680_RS08070;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_311563557.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	7022	8266	.	-	.	ID=gene-RM680_RS08075;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=RM680_RS08075;old_locus_tag=RM680_08080
NZ_JAVRJI010000009.1	Protein Homology	CDS	7022	8266	.	-	0	ID=cds-WP_001829419.1;Parent=gene-RM680_RS08075;Dbxref=GenBank:WP_001829419.1;Name=WP_001829419.1;gbkey=CDS;gene=hisD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497701.1;locus_tag=RM680_RS08075;product=histidinol dehydrogenase;protein_id=WP_001829419.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	8259	8873	.	-	.	ID=gene-RM680_RS08080;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=RM680_RS08080;old_locus_tag=RM680_08085
NZ_JAVRJI010000009.1	Protein Homology	CDS	8259	8873	.	-	0	ID=cds-WP_001829424.1;Parent=gene-RM680_RS08080;Dbxref=GenBank:WP_001829424.1;Name=WP_001829424.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458067.1;locus_tag=RM680_RS08080;product=ATP phosphoribosyltransferase;protein_id=WP_001829424.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	8898	9710	.	-	.	ID=gene-RM680_RS08085;Name=RM680_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08085;old_locus_tag=RM680_08090
NZ_JAVRJI010000009.1	Protein Homology	CDS	8898	9710	.	-	0	ID=cds-WP_002495317.1;Parent=gene-RM680_RS08085;Dbxref=GenBank:WP_002495317.1;Name=WP_002495317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468597.1;locus_tag=RM680_RS08085;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_002495317.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	9947	10363	.	-	.	ID=gene-RM680_RS08090;Name=RM680_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08090;old_locus_tag=RM680_08095
NZ_JAVRJI010000009.1	Protein Homology	CDS	9947	10363	.	-	0	ID=cds-WP_001829440.1;Parent=gene-RM680_RS08090;Dbxref=GenBank:WP_001829440.1;Name=WP_001829440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473453.1;locus_tag=RM680_RS08090;product=hypothetical protein;protein_id=WP_001829440.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	10466	10876	.	+	.	ID=gene-RM680_RS08095;Name=RM680_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08095;old_locus_tag=RM680_08100
NZ_JAVRJI010000009.1	Protein Homology	CDS	10466	10876	.	+	0	ID=cds-WP_001829421.1;Parent=gene-RM680_RS08095;Dbxref=GenBank:WP_001829421.1;Name=WP_001829421.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489626.1;locus_tag=RM680_RS08095;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_001829421.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	11039	11446	.	+	.	ID=gene-RM680_RS08100;Name=RM680_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08100;old_locus_tag=RM680_08105
NZ_JAVRJI010000009.1	Protein Homology	CDS	11039	11446	.	+	0	ID=cds-WP_001829438.1;Parent=gene-RM680_RS08100;Dbxref=GenBank:WP_001829438.1;Name=WP_001829438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464374.1;locus_tag=RM680_RS08100;product=YjdF family protein;protein_id=WP_001829438.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	11590	12108	.	-	.	ID=gene-RM680_RS08105;Name=RM680_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08105;old_locus_tag=RM680_08110
NZ_JAVRJI010000009.1	Protein Homology	CDS	11590	12108	.	-	0	ID=cds-WP_001829416.1;Parent=gene-RM680_RS08105;Dbxref=GenBank:WP_001829416.1;Name=WP_001829416.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829416.1;locus_tag=RM680_RS08105;product=GNAT family N-acetyltransferase;protein_id=WP_001829416.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	12460	13956	.	+	.	ID=gene-RM680_RS08110;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=RM680_RS08110;old_locus_tag=RM680_08115
NZ_JAVRJI010000009.1	Protein Homology	CDS	12460	13956	.	+	0	ID=cds-WP_001829441.1;Parent=gene-RM680_RS08110;Dbxref=GenBank:WP_001829441.1;Name=WP_001829441.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434914.1;locus_tag=RM680_RS08110;product=L-lactate dehydrogenase (quinone);protein_id=WP_001829441.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	15177	15692	.	+	.	ID=gene-RM680_RS08115;Name=RM680_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08115;old_locus_tag=RM680_08120
NZ_JAVRJI010000009.1	Protein Homology	CDS	15177	15692	.	+	0	ID=cds-WP_001829423.1;Parent=gene-RM680_RS08115;Dbxref=GenBank:WP_001829423.1;Name=WP_001829423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494583.1;locus_tag=RM680_RS08115;product=YceI family protein;protein_id=WP_001829423.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	15952	16929	.	-	.	ID=gene-RM680_RS08120;Name=RM680_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08120;old_locus_tag=RM680_08125
NZ_JAVRJI010000009.1	Protein Homology	CDS	15952	16929	.	-	0	ID=cds-WP_001829433.1;Parent=gene-RM680_RS08120;Dbxref=GenBank:WP_001829433.1;Name=WP_001829433.1;Ontology_term=GO:0005515,GO:0016787,GO:0046872;gbkey=CDS;go_function=protein binding|0005515||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501472.1;locus_tag=RM680_RS08120;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_001829433.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	17212	18174	.	+	.	ID=gene-RM680_RS08125;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=RM680_RS08125;old_locus_tag=RM680_08130
NZ_JAVRJI010000009.1	Protein Homology	CDS	17212	18174	.	+	0	ID=cds-WP_001829434.1;Parent=gene-RM680_RS08125;Dbxref=GenBank:WP_001829434.1;Name=WP_001829434.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446905.1;locus_tag=RM680_RS08125;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_001829434.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	18368	19006	.	+	.	ID=gene-RM680_RS08130;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=RM680_RS08130;old_locus_tag=RM680_08135
NZ_JAVRJI010000009.1	Protein Homology	CDS	18368	19006	.	+	0	ID=cds-WP_001829422.1;Parent=gene-RM680_RS08130;Dbxref=GenBank:WP_001829422.1;Name=WP_001829422.1;Ontology_term=GO:0006508,GO:0008234,GO:0016920,GO:0005829;gbkey=CDS;gene=pcp;go_component=cytosol|0005829||IEA;go_function=cysteine-type peptidase activity|0008234||IEA,pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503506.1;locus_tag=RM680_RS08130;product=pyroglutamyl-peptidase I;protein_id=WP_001829422.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	19040	19600	.	-	.	ID=gene-RM680_RS08135;Name=RM680_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08135;old_locus_tag=RM680_08140
NZ_JAVRJI010000009.1	Protein Homology	CDS	19040	19600	.	-	0	ID=cds-WP_001829430.1;Parent=gene-RM680_RS08135;Dbxref=GenBank:WP_001829430.1;Name=WP_001829430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477271.1;locus_tag=RM680_RS08135;product=tubby C-terminal domain-like protein;protein_id=WP_001829430.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	19781	21373	.	+	.	ID=gene-RM680_RS08140;Name=RM680_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08140;old_locus_tag=RM680_08145
NZ_JAVRJI010000009.1	Protein Homology	CDS	19781	21373	.	+	0	ID=cds-WP_002495210.1;Parent=gene-RM680_RS08140;Dbxref=GenBank:WP_002495210.1;Name=WP_002495210.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495321.1;locus_tag=RM680_RS08140;product=BCCT family transporter;protein_id=WP_002495210.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	21538	22050	.	-	.	ID=gene-RM680_RS08145;Name=isaB;gbkey=Gene;gene=isaB;gene_biotype=protein_coding;locus_tag=RM680_RS08145;old_locus_tag=RM680_08150
NZ_JAVRJI010000009.1	Protein Homology	CDS	21538	22050	.	-	0	ID=cds-WP_001829442.1;Parent=gene-RM680_RS08145;Dbxref=GenBank:WP_001829442.1;Name=WP_001829442.1;gbkey=CDS;gene=isaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829442.1;locus_tag=RM680_RS08145;product=immunodominant staphylococcal antigen IsaB family protein;protein_id=WP_001829442.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	22327	22482	.	-	.	ID=gene-RM680_RS08150;Name=RM680_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08150;old_locus_tag=RM680_08155
NZ_JAVRJI010000009.1	GeneMarkS-2+	CDS	22327	22482	.	-	0	ID=cds-WP_001830507.1-2;Parent=gene-RM680_RS08150;Dbxref=GenBank:WP_001830507.1;Name=WP_001830507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS08150;product=hypothetical protein;protein_id=WP_001830507.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	22734	24011	.	-	.	ID=gene-RM680_RS08155;Name=RM680_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08155;old_locus_tag=RM680_08160
NZ_JAVRJI010000009.1	Protein Homology	CDS	22734	24011	.	-	0	ID=cds-WP_020368031.1;Parent=gene-RM680_RS08155;Dbxref=GenBank:WP_020368031.1;Name=WP_020368031.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494046.1;locus_tag=RM680_RS08155;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_020368031.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	24025	25065	.	-	.	ID=gene-RM680_RS08160;Name=RM680_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08160;old_locus_tag=RM680_08165
NZ_JAVRJI010000009.1	Protein Homology	CDS	24025	25065	.	-	0	ID=cds-WP_001830482.1;Parent=gene-RM680_RS08160;Dbxref=GenBank:WP_001830482.1;Name=WP_001830482.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830482.1;locus_tag=RM680_RS08160;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_001830482.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	25136	26089	.	-	.	ID=gene-RM680_RS08165;Name=RM680_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08165;old_locus_tag=RM680_08170
NZ_JAVRJI010000009.1	Protein Homology	CDS	25136	26089	.	-	0	ID=cds-WP_001830565.1;Parent=gene-RM680_RS08165;Dbxref=GenBank:WP_001830565.1;Name=WP_001830565.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458080.1;locus_tag=RM680_RS08165;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_001830565.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	26131	27483	.	-	.	ID=gene-RM680_RS08170;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=RM680_RS08170;old_locus_tag=RM680_08175
NZ_JAVRJI010000009.1	Protein Homology	CDS	26131	27483	.	-	0	ID=cds-WP_020368030.1;Parent=gene-RM680_RS08170;Dbxref=GenBank:WP_020368030.1;Name=WP_020368030.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368030.1;locus_tag=RM680_RS08170;product=dihydrolipoyl dehydrogenase;protein_id=WP_020368030.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	27808	29226	.	+	.	ID=gene-RM680_RS08175;Name=RM680_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08175;old_locus_tag=RM680_08180
NZ_JAVRJI010000009.1	Protein Homology	CDS	27808	29226	.	+	0	ID=cds-WP_002469242.1;Parent=gene-RM680_RS08175;Dbxref=GenBank:WP_002469242.1;Name=WP_002469242.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501478.1;locus_tag=RM680_RS08175;product=anion permease;protein_id=WP_002469242.1;transl_table=11
NZ_JAVRJI010000009.1	cmsearch	riboswitch	29396	29497	.	+	.	ID=id-NZ_JAVRJI010000009.1:29396..29497;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000009.1	RefSeq	gene	29554	30465	.	+	.	ID=gene-RM680_RS08180;Name=RM680_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08180;old_locus_tag=RM680_08185
NZ_JAVRJI010000009.1	Protein Homology	CDS	29554	30465	.	+	0	ID=cds-WP_002469238.1;Parent=gene-RM680_RS08180;Dbxref=GenBank:WP_002469238.1;Name=WP_002469238.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113616.1;locus_tag=RM680_RS08180;product=ABC transporter substrate-binding protein;protein_id=WP_002469238.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	30573	31475	.	-	.	ID=gene-RM680_RS08185;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=RM680_RS08185;old_locus_tag=RM680_08190
NZ_JAVRJI010000009.1	Protein Homology	CDS	30573	31475	.	-	0	ID=cds-WP_002497705.1;Parent=gene-RM680_RS08185;Dbxref=GenBank:WP_002497705.1;Name=WP_002497705.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502625.1;locus_tag=RM680_RS08185;product=EamA family transporter RarD;protein_id=WP_002497705.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	31610	32107	.	-	.	ID=gene-RM680_RS08190;Name=RM680_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08190;old_locus_tag=RM680_08195
NZ_JAVRJI010000009.1	Protein Homology	CDS	31610	32107	.	-	0	ID=cds-WP_001830560.1;Parent=gene-RM680_RS08190;Dbxref=GenBank:WP_001830560.1;Name=WP_001830560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475430.1;locus_tag=RM680_RS08190;product=MepB family protein;protein_id=WP_001830560.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	32202	33905	.	-	.	ID=gene-RM680_RS08195;Name=RM680_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08195;old_locus_tag=RM680_08200
NZ_JAVRJI010000009.1	Protein Homology	CDS	32202	33905	.	-	0	ID=cds-WP_002502626.1;Parent=gene-RM680_RS08195;Dbxref=GenBank:WP_002502626.1;Name=WP_002502626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830575.1;locus_tag=RM680_RS08195;product=ABC-ATPase domain-containing protein;protein_id=WP_002502626.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	34060	35400	.	-	.	ID=gene-RM680_RS08200;Name=glcP;gbkey=Gene;gene=glcP;gene_biotype=protein_coding;locus_tag=RM680_RS08200;old_locus_tag=RM680_08205
NZ_JAVRJI010000009.1	Protein Homology	CDS	34060	35400	.	-	0	ID=cds-WP_001830529.1;Parent=gene-RM680_RS08200;Dbxref=GenBank:WP_001830529.1;Name=WP_001830529.1;Ontology_term=GO:0015293;gbkey=CDS;gene=glcP;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467669.1;locus_tag=RM680_RS08200;product=glucose transporter GlcP;protein_id=WP_001830529.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	35679	37865	.	-	.	ID=gene-RM680_RS08205;Name=lip;gbkey=Gene;gene=lip;gene_biotype=protein_coding;locus_tag=RM680_RS08205;old_locus_tag=RM680_08210
NZ_JAVRJI010000009.1	Protein Homology	CDS	35679	37865	.	-	0	ID=cds-WP_020368029.1;Parent=gene-RM680_RS08205;Dbxref=GenBank:WP_020368029.1;Name=WP_020368029.1;Ontology_term=GO:0005509,GO:0016298;gbkey=CDS;gene=lip;go_function=calcium ion binding|0005509||IEA,lipase activity|0016298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458087.1;locus_tag=RM680_RS08205;product=YSIRK-targeted triacylglycerol lipase;protein_id=WP_020368029.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	38236	38859	.	-	.	ID=gene-RM680_RS08210;Name=ausB;gbkey=Gene;gene=ausB;gene_biotype=protein_coding;locus_tag=RM680_RS08210;old_locus_tag=RM680_08215
NZ_JAVRJI010000009.1	Protein Homology	CDS	38236	38859	.	-	0	ID=cds-WP_001830554.1;Parent=gene-RM680_RS08210;Dbxref=GenBank:WP_001830554.1;Name=WP_001830554.1;Ontology_term=GO:0016780;gbkey=CDS;gene=ausB;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477283.1;locus_tag=RM680_RS08210;product=aureusimine biosynthesis 4'-phosphopantetheinyl transferase AusB;protein_id=WP_001830554.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	38869	46032	.	-	.	ID=gene-RM680_RS08215;Name=ausA;gbkey=Gene;gene=ausA;gene_biotype=protein_coding;locus_tag=RM680_RS08215;old_locus_tag=RM680_08220
NZ_JAVRJI010000009.1	Protein Homology	CDS	38869	46032	.	-	0	ID=cds-WP_049319054.1;Parent=gene-RM680_RS08215;Dbxref=GenBank:WP_049319054.1;Name=WP_049319054.1;gbkey=CDS;gene=ausA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487805.1;locus_tag=RM680_RS08215;product=aureusimine non-ribosomal peptide synthetase AusA;protein_id=WP_049319054.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	46239	47480	.	-	.	ID=gene-RM680_RS08220;Name=RM680_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08220;old_locus_tag=RM680_08225
NZ_JAVRJI010000009.1	Protein Homology	CDS	46239	47480	.	-	0	ID=cds-WP_001830478.1;Parent=gene-RM680_RS08220;Dbxref=GenBank:WP_001830478.1;Name=WP_001830478.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830478.1;locus_tag=RM680_RS08220;product=MFS transporter;protein_id=WP_001830478.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	47756	47962	.	-	.	ID=gene-RM680_RS08225;Name=RM680_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08225;old_locus_tag=RM680_08230
NZ_JAVRJI010000009.1	Protein Homology	CDS	47756	47962	.	-	0	ID=cds-WP_002456765.1;Parent=gene-RM680_RS08225;Dbxref=GenBank:WP_002456765.1;Name=WP_002456765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456765.1;locus_tag=RM680_RS08225;product=hypothetical protein;protein_id=WP_002456765.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	48002	49420	.	-	.	ID=gene-RM680_RS08230;Name=RM680_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08230;old_locus_tag=RM680_08235
NZ_JAVRJI010000009.1	Protein Homology	CDS	48002	49420	.	-	0	ID=cds-WP_311563558.1;Parent=gene-RM680_RS08230;Dbxref=GenBank:WP_311563558.1;Name=WP_311563558.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473502.1;locus_tag=RM680_RS08230;product=MDR family MFS transporter;protein_id=WP_311563558.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	49981	50229	.	-	.	ID=gene-RM680_RS08235;Name=RM680_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08235;old_locus_tag=RM680_08240
NZ_JAVRJI010000009.1	Protein Homology	CDS	49981	50229	.	-	0	ID=cds-WP_002467652.1;Parent=gene-RM680_RS08235;Dbxref=GenBank:WP_002467652.1;Name=WP_002467652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830580.1;locus_tag=RM680_RS08235;product=hypothetical protein;protein_id=WP_002467652.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	50561	52009	.	+	.	ID=gene-RM680_RS08240;Name=RM680_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08240;old_locus_tag=RM680_08245
NZ_JAVRJI010000009.1	Protein Homology	CDS	50561	52009	.	+	0	ID=cds-WP_002456315.1;Parent=gene-RM680_RS08240;Dbxref=GenBank:WP_002456315.1;Name=WP_002456315.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503516.1;locus_tag=RM680_RS08240;product=MFS transporter;protein_id=WP_002456315.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	52089	52463	.	-	.	ID=gene-RM680_RS08245;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=RM680_RS08245;old_locus_tag=RM680_08250
NZ_JAVRJI010000009.1	Protein Homology	CDS	52089	52463	.	-	0	ID=cds-WP_001830585.1;Parent=gene-RM680_RS08245;Dbxref=GenBank:WP_001830585.1;Name=WP_001830585.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830585.1;locus_tag=RM680_RS08245;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_001830585.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	52467	53042	.	-	.	ID=gene-RM680_RS08250;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=RM680_RS08250;old_locus_tag=RM680_08255
NZ_JAVRJI010000009.1	Protein Homology	CDS	52467	53042	.	-	0	ID=cds-WP_001830509.1;Parent=gene-RM680_RS08250;Dbxref=GenBank:WP_001830509.1;Name=WP_001830509.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464360.1;locus_tag=RM680_RS08250;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_001830509.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	53097	54059	.	-	.	ID=gene-RM680_RS08255;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=RM680_RS08255;old_locus_tag=RM680_08260
NZ_JAVRJI010000009.1	Protein Homology	CDS	53097	54059	.	-	0	ID=cds-WP_002467644.1;Parent=gene-RM680_RS08255;Dbxref=GenBank:WP_002467644.1;Name=WP_002467644.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361079.1;locus_tag=RM680_RS08255;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_002467644.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	54075	55178	.	-	.	ID=gene-RM680_RS08260;Name=RM680_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08260;old_locus_tag=RM680_08265
NZ_JAVRJI010000009.1	Protein Homology	CDS	54075	55178	.	-	0	ID=cds-WP_001830573.1;Parent=gene-RM680_RS08260;Dbxref=GenBank:WP_001830573.1;Name=WP_001830573.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458095.1;locus_tag=RM680_RS08260;product=glycerol dehydrogenase;protein_id=WP_001830573.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	55483	56448	.	-	.	ID=gene-RM680_RS08265;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=RM680_RS08265;old_locus_tag=RM680_08270
NZ_JAVRJI010000009.1	Protein Homology	CDS	55483	56448	.	-	0	ID=cds-WP_002469259.1;Parent=gene-RM680_RS08265;Dbxref=GenBank:WP_002469259.1;Name=WP_002469259.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464359.1;locus_tag=RM680_RS08265;product=biotin synthase BioB;protein_id=WP_002469259.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	56735	57610	.	-	.	ID=gene-RM680_RS08270;Name=RM680_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08270;old_locus_tag=RM680_08275
NZ_JAVRJI010000009.1	Protein Homology	CDS	56735	57610	.	-	0	ID=cds-WP_002469251.1;Parent=gene-RM680_RS08270;Dbxref=GenBank:WP_002469251.1;Name=WP_002469251.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361081.1;locus_tag=RM680_RS08270;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_002469251.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	57718	58146	.	-	.	ID=gene-RM680_RS08275;Name=RM680_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08275;old_locus_tag=RM680_08280
NZ_JAVRJI010000009.1	Protein Homology	CDS	57718	58146	.	-	0	ID=cds-WP_020368027.1;Parent=gene-RM680_RS08275;Dbxref=GenBank:WP_020368027.1;Name=WP_020368027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437790.1;locus_tag=RM680_RS08275;product=FosB family fosfomycin resistance bacillithiol transferase;protein_id=WP_020368027.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	58258	58482	.	-	.	ID=gene-RM680_RS08280;Name=RM680_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08280;old_locus_tag=RM680_08285
NZ_JAVRJI010000009.1	Protein Homology	CDS	58258	58482	.	-	0	ID=cds-WP_001830485.1;Parent=gene-RM680_RS08280;Dbxref=GenBank:WP_001830485.1;Name=WP_001830485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830485.1;locus_tag=RM680_RS08280;product=hypothetical protein;protein_id=WP_001830485.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	58967	59968	.	+	.	ID=gene-RM680_RS08285;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=RM680_RS08285;old_locus_tag=RM680_08290
NZ_JAVRJI010000009.1	Protein Homology	CDS	58967	59968	.	+	0	ID=cds-WP_001830522.1;Parent=gene-RM680_RS08285;Dbxref=GenBank:WP_001830522.1;Name=WP_001830522.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499671.1;locus_tag=RM680_RS08285;product=ornithine carbamoyltransferase;protein_id=WP_001830522.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	59991	60923	.	+	.	ID=gene-RM680_RS08290;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=RM680_RS08290;old_locus_tag=RM680_08295
NZ_JAVRJI010000009.1	Protein Homology	CDS	59991	60923	.	+	0	ID=cds-WP_001830533.1;Parent=gene-RM680_RS08290;Dbxref=GenBank:WP_001830533.1;Name=WP_001830533.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499672.1;locus_tag=RM680_RS08290;product=carbamate kinase;protein_id=WP_001830533.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	61088	62653	.	+	.	ID=gene-RM680_RS08295;Name=RM680_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08295;old_locus_tag=RM680_08300
NZ_JAVRJI010000009.1	Protein Homology	CDS	61088	62653	.	+	0	ID=cds-WP_002456769.1;Parent=gene-RM680_RS08295;Dbxref=GenBank:WP_002456769.1;Name=WP_002456769.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437775.1;locus_tag=RM680_RS08295;product=YfcC family protein;protein_id=WP_002456769.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	62923	63690	.	-	.	ID=gene-RM680_RS08300;Name=RM680_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08300;old_locus_tag=RM680_08305
NZ_JAVRJI010000009.1	Protein Homology	CDS	62923	63690	.	-	0	ID=cds-WP_001830470.1;Parent=gene-RM680_RS08300;Dbxref=GenBank:WP_001830470.1;Name=WP_001830470.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437771.1;locus_tag=RM680_RS08300;product=alpha/beta hydrolase;protein_id=WP_001830470.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	63731	64378	.	-	.	ID=gene-RM680_RS08305;Name=RM680_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08305;old_locus_tag=RM680_08310
NZ_JAVRJI010000009.1	Protein Homology	CDS	63731	64378	.	-	0	ID=cds-WP_001830555.1;Parent=gene-RM680_RS08305;Dbxref=GenBank:WP_001830555.1;Name=WP_001830555.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830555.1;locus_tag=RM680_RS08305;product=ABC transporter permease;protein_id=WP_001830555.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	64381	65340	.	-	.	ID=gene-RM680_RS08310;Name=RM680_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08310;old_locus_tag=RM680_08315
NZ_JAVRJI010000009.1	Protein Homology	CDS	64381	65340	.	-	0	ID=cds-WP_001830497.1;Parent=gene-RM680_RS08310;Dbxref=GenBank:WP_001830497.1;Name=WP_001830497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446869.1;locus_tag=RM680_RS08310;product=osmoprotectant ABC transporter substrate-binding protein;protein_id=WP_001830497.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	65359	65994	.	-	.	ID=gene-RM680_RS08315;Name=RM680_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08315;old_locus_tag=RM680_08320
NZ_JAVRJI010000009.1	Protein Homology	CDS	65359	65994	.	-	0	ID=cds-WP_002456313.1;Parent=gene-RM680_RS08315;Dbxref=GenBank:WP_002456313.1;Name=WP_002456313.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959343.1;locus_tag=RM680_RS08315;product=ABC transporter permease;protein_id=WP_002456313.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	65991	67178	.	-	.	ID=gene-RM680_RS08320;Name=RM680_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08320;old_locus_tag=RM680_08325
NZ_JAVRJI010000009.1	Protein Homology	CDS	65991	67178	.	-	0	ID=cds-WP_001830513.1;Parent=gene-RM680_RS08320;Dbxref=GenBank:WP_001830513.1;Name=WP_001830513.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475443.1;locus_tag=RM680_RS08320;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WP_001830513.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	67313	67801	.	-	.	ID=gene-RM680_RS08325;Name=RM680_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08325;old_locus_tag=RM680_08330
NZ_JAVRJI010000009.1	Protein Homology	CDS	67313	67801	.	-	0	ID=cds-WP_002437763.1;Parent=gene-RM680_RS08325;Dbxref=GenBank:WP_002437763.1;Name=WP_002437763.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446866.1;locus_tag=RM680_RS08325;product=thioesterase family protein;protein_id=WP_002437763.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	67798	68763	.	-	.	ID=gene-RM680_RS08330;Name=RM680_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08330;old_locus_tag=RM680_08335
NZ_JAVRJI010000009.1	Protein Homology	CDS	67798	68763	.	-	0	ID=cds-WP_001830516.1;Parent=gene-RM680_RS08330;Dbxref=GenBank:WP_001830516.1;Name=WP_001830516.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830516.1;locus_tag=RM680_RS08330;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_001830516.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	68763	69656	.	-	.	ID=gene-RM680_RS08335;Name=RM680_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08335;old_locus_tag=RM680_08340
NZ_JAVRJI010000009.1	Protein Homology	CDS	68763	69656	.	-	0	ID=cds-WP_002494032.1;Parent=gene-RM680_RS08335;Dbxref=GenBank:WP_002494032.1;Name=WP_002494032.1;Ontology_term=GO:0019475,GO:0043720,GO:0046872;gbkey=CDS;go_function=3-keto-5-aminohexanoate cleavage activity|0043720||IEA,metal ion binding|0046872||IEA;go_process=L-lysine fermentation|0019475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502631.1;locus_tag=RM680_RS08335;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_002494032.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	69795	70334	.	-	.	ID=gene-RM680_RS08340;Name=RM680_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08340;old_locus_tag=RM680_08345
NZ_JAVRJI010000009.1	Protein Homology	CDS	69795	70334	.	-	0	ID=cds-WP_002437759.1;Parent=gene-RM680_RS08340;Dbxref=GenBank:WP_002437759.1;Name=WP_002437759.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464354.1;locus_tag=RM680_RS08340;product=TetR/AcrR family transcriptional regulator;protein_id=WP_002437759.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	70800	72161	.	-	.	ID=gene-RM680_RS08345;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=RM680_RS08345;old_locus_tag=RM680_08350
NZ_JAVRJI010000009.1	Protein Homology	CDS	70800	72161	.	-	0	ID=cds-WP_002437758.1;Parent=gene-RM680_RS08345;Dbxref=GenBank:WP_002437758.1;Name=WP_002437758.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437758.1;locus_tag=RM680_RS08345;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_002437758.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	72512	73729	.	+	.	ID=gene-RM680_RS08350;Name=RM680_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08350;old_locus_tag=RM680_08355
NZ_JAVRJI010000009.1	Protein Homology	CDS	72512	73729	.	+	0	ID=cds-WP_001830510.1;Parent=gene-RM680_RS08350;Dbxref=GenBank:WP_001830510.1;Name=WP_001830510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830510.1;locus_tag=RM680_RS08350;product=ArgE/DapE family deacylase;protein_id=WP_001830510.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	73868	74623	.	-	.	ID=gene-RM680_RS08355;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=RM680_RS08355;old_locus_tag=RM680_08360
NZ_JAVRJI010000009.1	Protein Homology	CDS	73868	74623	.	-	0	ID=cds-WP_001830511.1;Parent=gene-RM680_RS08355;Dbxref=GenBank:WP_001830511.1;Name=WP_001830511.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498785.1;locus_tag=RM680_RS08355;product=pyruvate formate-lyase-activating protein;protein_id=WP_001830511.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	74645	76891	.	-	.	ID=gene-RM680_RS08360;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=RM680_RS08360;old_locus_tag=RM680_08365
NZ_JAVRJI010000009.1	Protein Homology	CDS	74645	76891	.	-	0	ID=cds-WP_001830559.1;Parent=gene-RM680_RS08360;Dbxref=GenBank:WP_001830559.1;Name=WP_001830559.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498784.1;locus_tag=RM680_RS08360;product=formate C-acetyltransferase;protein_id=WP_001830559.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	77632	78822	.	-	.	ID=gene-RM680_RS08365;Name=cntE;gbkey=Gene;gene=cntE;gene_biotype=protein_coding;locus_tag=RM680_RS08365;old_locus_tag=RM680_08370
NZ_JAVRJI010000009.1	Protein Homology	CDS	77632	78822	.	-	0	ID=cds-WP_001830562.1;Parent=gene-RM680_RS08365;Dbxref=GenBank:WP_001830562.1;Name=WP_001830562.1;gbkey=CDS;gene=cntE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467688.1;locus_tag=RM680_RS08365;product=staphylopine family metallophore export MFS transporter CntE;protein_id=WP_001830562.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	78834	79583	.	-	.	ID=gene-RM680_RS08370;Name=RM680_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08370;old_locus_tag=RM680_08375
NZ_JAVRJI010000009.1	Protein Homology	CDS	78834	79583	.	-	0	ID=cds-WP_001830579.1;Parent=gene-RM680_RS08370;Dbxref=GenBank:WP_001830579.1;Name=WP_001830579.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501229.1;locus_tag=RM680_RS08370;product=ABC transporter ATP-binding protein;protein_id=WP_001830579.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	79576	80391	.	-	.	ID=gene-RM680_RS08375;Name=cntD;gbkey=Gene;gene=cntD;gene_biotype=protein_coding;locus_tag=RM680_RS08375;old_locus_tag=RM680_08380
NZ_JAVRJI010000009.1	Protein Homology	CDS	79576	80391	.	-	0	ID=cds-WP_001830532.1;Parent=gene-RM680_RS08375;Dbxref=GenBank:WP_001830532.1;Name=WP_001830532.1;gbkey=CDS;gene=cntD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361090.1;locus_tag=RM680_RS08375;product=staphylopine uptake ABC transporter ATP-binding protein CntD;protein_id=WP_001830532.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	80378	81256	.	-	.	ID=gene-RM680_RS08380;Name=cntC;gbkey=Gene;gene=cntC;gene_biotype=protein_coding;gene_synonym=opp1C;locus_tag=RM680_RS08380;old_locus_tag=RM680_08385
NZ_JAVRJI010000009.1	Protein Homology	CDS	80378	81256	.	-	0	ID=cds-WP_002437750.1;Parent=gene-RM680_RS08380;Dbxref=GenBank:WP_002437750.1;Name=WP_002437750.1;gbkey=CDS;gene=cntC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470552.1;locus_tag=RM680_RS08380;product=staphylopine uptake ABC transporter permease subunit CntC;protein_id=WP_002437750.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	81253	82188	.	-	.	ID=gene-RM680_RS08385;Name=opp1B;gbkey=Gene;gene=opp1B;gene_biotype=protein_coding;locus_tag=RM680_RS08385;old_locus_tag=RM680_08390
NZ_JAVRJI010000009.1	Protein Homology	CDS	81253	82188	.	-	0	ID=cds-WP_001830582.1;Parent=gene-RM680_RS08385;Dbxref=GenBank:WP_001830582.1;Name=WP_001830582.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp1B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501225.1;locus_tag=RM680_RS08385;product=nickel/cobalt ABC transporter permease;protein_id=WP_001830582.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	82201	83799	.	-	.	ID=gene-RM680_RS08390;Name=cntA;gbkey=Gene;gene=cntA;gene_biotype=protein_coding;locus_tag=RM680_RS08390;old_locus_tag=RM680_08395
NZ_JAVRJI010000009.1	Protein Homology	CDS	82201	83799	.	-	0	ID=cds-WP_001830462.1;Parent=gene-RM680_RS08390;Dbxref=GenBank:WP_001830462.1;Name=WP_001830462.1;gbkey=CDS;gene=cntA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501226.1;locus_tag=RM680_RS08390;product=staphylopine-dependent metal ABC transporter substrate-binding lipoprotein CntA;protein_id=WP_001830462.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	83850	85142	.	-	.	ID=gene-RM680_RS08395;Name=cntM;gbkey=Gene;gene=cntM;gene_biotype=protein_coding;locus_tag=RM680_RS08395;old_locus_tag=RM680_08400
NZ_JAVRJI010000009.1	Protein Homology	CDS	83850	85142	.	-	0	ID=cds-WP_002437743.1;Parent=gene-RM680_RS08395;Dbxref=GenBank:WP_002437743.1;Name=WP_002437743.1;gbkey=CDS;gene=cntM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464346.1;locus_tag=RM680_RS08395;product=staphylopine biosynthesis dehydrogenase;protein_id=WP_002437743.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	85135	85950	.	-	.	ID=gene-RM680_RS08400;Name=cntL;gbkey=Gene;gene=cntL;gene_biotype=protein_coding;locus_tag=RM680_RS08400;old_locus_tag=RM680_08405
NZ_JAVRJI010000009.1	Protein Homology	CDS	85135	85950	.	-	0	ID=cds-WP_001830574.1;Parent=gene-RM680_RS08400;Dbxref=GenBank:WP_001830574.1;Name=WP_001830574.1;gbkey=CDS;gene=cntL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495193.1;locus_tag=RM680_RS08400;product=staphylopine biosynthesis enzyme CntL;protein_id=WP_001830574.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	85947	86786	.	-	.	ID=gene-RM680_RS08405;Name=cntK;gbkey=Gene;gene=cntK;gene_biotype=protein_coding;locus_tag=RM680_RS08405;old_locus_tag=RM680_08410
NZ_JAVRJI010000009.1	Protein Homology	CDS	85947	86786	.	-	0	ID=cds-WP_001830571.1;Parent=gene-RM680_RS08405;Dbxref=GenBank:WP_001830571.1;Name=WP_001830571.1;gbkey=CDS;gene=cntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368392.1;locus_tag=RM680_RS08405;product=histidine racemase CntK;protein_id=WP_001830571.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	86974	87420	.	+	.	ID=gene-RM680_RS08410;Name=RM680_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08410;old_locus_tag=RM680_08415
NZ_JAVRJI010000009.1	GeneMarkS-2+	CDS	86974	87420	.	+	0	ID=cds-WP_001832584.1;Parent=gene-RM680_RS08410;Dbxref=GenBank:WP_001832584.1;Name=WP_001832584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS08410;product=hypothetical protein;protein_id=WP_001832584.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	87435	88124	.	+	.	ID=gene-RM680_RS08415;Name=RM680_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08415;old_locus_tag=RM680_08420
NZ_JAVRJI010000009.1	Protein Homology	CDS	87435	88124	.	+	0	ID=cds-WP_001830566.1;Parent=gene-RM680_RS08415;Dbxref=GenBank:WP_001830566.1;Name=WP_001830566.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364620.1;locus_tag=RM680_RS08415;product=ABC transporter ATP-binding protein;protein_id=WP_001830566.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	88252	89025	.	-	.	ID=gene-RM680_RS08420;Name=RM680_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08420;old_locus_tag=RM680_08425
NZ_JAVRJI010000009.1	Protein Homology	CDS	88252	89025	.	-	0	ID=cds-WP_001830577.1;Parent=gene-RM680_RS08420;Dbxref=GenBank:WP_001830577.1;Name=WP_001830577.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase (NAD+) activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484659.1;locus_tag=RM680_RS08420;product=acetoin reductase;protein_id=WP_001830577.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	89194	90570	.	-	.	ID=gene-RM680_RS08425;Name=RM680_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08425;old_locus_tag=RM680_08430
NZ_JAVRJI010000009.1	Protein Homology	CDS	89194	90570	.	-	0	ID=cds-WP_020368391.1;Parent=gene-RM680_RS08425;Dbxref=GenBank:WP_020368391.1;Name=WP_020368391.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446841.1;locus_tag=RM680_RS08425;product=MFS transporter;protein_id=WP_020368391.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	90599	93616	.	-	.	ID=gene-RM680_RS08430;Name=RM680_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08430;old_locus_tag=RM680_08435
NZ_JAVRJI010000009.1	Protein Homology	CDS	90599	93616	.	-	0	ID=cds-WP_002437728.1;Parent=gene-RM680_RS08430;Dbxref=GenBank:WP_002437728.1;Name=WP_002437728.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496031.1;locus_tag=RM680_RS08430;product=NADH-dependent flavin oxidoreductase;protein_id=WP_002437728.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	93699	94604	.	-	.	ID=gene-RM680_RS08435;Name=RM680_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08435;old_locus_tag=RM680_08440
NZ_JAVRJI010000009.1	Protein Homology	CDS	93699	94604	.	-	0	ID=cds-WP_032604054.1;Parent=gene-RM680_RS08435;Dbxref=GenBank:WP_032604054.1;Name=WP_032604054.1;Ontology_term=GO:0017013,GO:0016740,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA,metal ion binding|0046872||IEA;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456311.1;locus_tag=RM680_RS08435;product=FAD:protein FMN transferase;protein_id=WP_032604054.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	95018	96013	.	-	.	ID=gene-RM680_RS08440;Name=RM680_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08440;old_locus_tag=RM680_08445
NZ_JAVRJI010000009.1	Protein Homology	CDS	95018	96013	.	-	0	ID=cds-WP_002437720.1;Parent=gene-RM680_RS08440;Dbxref=GenBank:WP_002437720.1;Name=WP_002437720.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498112.1;locus_tag=RM680_RS08440;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=WP_002437720.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	96270	97376	.	+	.	ID=gene-RM680_RS08445;Name=RM680_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08445;old_locus_tag=RM680_08450
NZ_JAVRJI010000009.1	Protein Homology	CDS	96270	97376	.	+	0	ID=cds-WP_020368389.1;Parent=gene-RM680_RS08445;Dbxref=GenBank:WP_020368389.1;Name=WP_020368389.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487534.1;locus_tag=RM680_RS08445;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_020368389.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	97370	98752	.	+	.	ID=gene-RM680_RS08450;Name=RM680_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08450;old_locus_tag=RM680_08455
NZ_JAVRJI010000009.1	Protein Homology	CDS	97370	98752	.	+	0	ID=cds-WP_020368388.1;Parent=gene-RM680_RS08450;Dbxref=GenBank:WP_020368388.1;Name=WP_020368388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495189.1;locus_tag=RM680_RS08450;product=nucleoside recognition domain-containing protein;protein_id=WP_020368388.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	98722	99603	.	+	.	ID=gene-RM680_RS08455;Name=RM680_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08455;old_locus_tag=RM680_08460
NZ_JAVRJI010000009.1	Protein Homology	CDS	98722	99603	.	+	0	ID=cds-WP_020368387.1;Parent=gene-RM680_RS08455;Dbxref=GenBank:WP_020368387.1;Name=WP_020368387.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475431.1;locus_tag=RM680_RS08455;product=CobW family GTP-binding protein;protein_id=WP_020368387.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	99748	100533	.	-	.	ID=gene-RM680_RS08460;Name=RM680_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08460;old_locus_tag=RM680_08465
NZ_JAVRJI010000009.1	Protein Homology	CDS	99748	100533	.	-	0	ID=cds-WP_080260023.1;Parent=gene-RM680_RS08460;Dbxref=GenBank:WP_080260023.1;Name=WP_080260023.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487539.1;locus_tag=RM680_RS08460;product=tandem-type lipoprotein;protein_id=WP_080260023.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	100748	102679	.	-	.	ID=gene-RM680_RS08465;Name=gehD;gbkey=Gene;gene=gehD;gene_biotype=protein_coding;locus_tag=RM680_RS08465;old_locus_tag=RM680_08470
NZ_JAVRJI010000009.1	Protein Homology	CDS	100748	102679	.	-	0	ID=cds-WP_049315852.1;Parent=gene-RM680_RS08465;Dbxref=GenBank:WP_049315852.1;Name=WP_049315852.1;gbkey=CDS;gene=gehD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_128081702.1;locus_tag=RM680_RS08465;product=YSIRK domain-containing triacylglycerol lipase GehD;protein_id=WP_049315852.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	103171	104358	.	+	.	ID=gene-RM680_RS08470;Name=RM680_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08470;old_locus_tag=RM680_08475
NZ_JAVRJI010000009.1	Protein Homology	CDS	103171	104358	.	+	0	ID=cds-WP_002497714.1;Parent=gene-RM680_RS08470;Dbxref=GenBank:WP_002497714.1;Name=WP_002497714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366922.1;locus_tag=RM680_RS08470;product=cysteine protease staphopain;protein_id=WP_002497714.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	104376	104693	.	+	.	ID=gene-RM680_RS08475;Name=RM680_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08475;old_locus_tag=RM680_08480
NZ_JAVRJI010000009.1	Protein Homology	CDS	104376	104693	.	+	0	ID=cds-WP_002469284.1;Parent=gene-RM680_RS08475;Dbxref=GenBank:WP_002469284.1;Name=WP_002469284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830557.1;locus_tag=RM680_RS08475;product=staphostatin A;protein_id=WP_002469284.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	104802	105488	.	-	.	ID=gene-RM680_RS08480;Name=RM680_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08480;old_locus_tag=RM680_08485
NZ_JAVRJI010000009.1	Protein Homology	CDS	104802	105488	.	-	0	ID=cds-WP_002469256.1;Parent=gene-RM680_RS08480;Dbxref=GenBank:WP_002469256.1;Name=WP_002469256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473421.1;locus_tag=RM680_RS08480;product=6-carboxyhexanoate--CoA ligase;protein_id=WP_002469256.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	105481	106614	.	-	.	ID=gene-RM680_RS08485;Name=RM680_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08485;old_locus_tag=RM680_08490
NZ_JAVRJI010000009.1	Protein Homology	CDS	105481	106614	.	-	0	ID=cds-WP_020368004.1;Parent=gene-RM680_RS08485;Dbxref=GenBank:WP_020368004.1;Name=WP_020368004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494017.1;locus_tag=RM680_RS08485;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_020368004.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	106625	107980	.	-	.	ID=gene-RM680_RS08490;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=RM680_RS08490;old_locus_tag=RM680_08495
NZ_JAVRJI010000009.1	Protein Homology	CDS	106625	107980	.	-	0	ID=cds-WP_020368005.1;Parent=gene-RM680_RS08490;Dbxref=GenBank:WP_020368005.1;Name=WP_020368005.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494016.1;locus_tag=RM680_RS08490;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_020368005.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	107973	108644	.	-	.	ID=gene-RM680_RS08495;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=RM680_RS08495;old_locus_tag=RM680_08500
NZ_JAVRJI010000009.1	Protein Homology	CDS	107973	108644	.	-	0	ID=cds-WP_002496554.1;Parent=gene-RM680_RS08495;Dbxref=GenBank:WP_002496554.1;Name=WP_002496554.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360181.1;locus_tag=RM680_RS08495;product=dethiobiotin synthase;protein_id=WP_002496554.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	108983	109135	.	-	.	ID=gene-RM680_RS08500;Name=RM680_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08500;old_locus_tag=RM680_08505
NZ_JAVRJI010000009.1	Protein Homology	CDS	108983	109135	.	-	0	ID=cds-WP_002437688.1;Parent=gene-RM680_RS08500;Dbxref=GenBank:WP_002437688.1;Name=WP_002437688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500916.1;locus_tag=RM680_RS08500;product=beta-class phenol-soluble modulin;protein_id=WP_002437688.1;transl_table=11
NZ_JAVRJI010000009.1	RefSeq	gene	109392	110105	.	-	.	ID=gene-RM680_RS08505;Name=RM680_RS08505;end_range=110105,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08505;old_locus_tag=RM680_08510;partial=true
NZ_JAVRJI010000009.1	Protein Homology	CDS	109392	110105	.	-	0	ID=cds-WP_311563560.1;Parent=gene-RM680_RS08505;Dbxref=GenBank:WP_311563560.1;Name=WP_311563560.1;end_range=110105,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082576.1;locus_tag=RM680_RS08505;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_311563560.1;transl_table=11
##sequence-region NZ_JAVRJI010000010.1 1 96295
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000010.1	RefSeq	region	1	96295	.	+	.	ID=NZ_JAVRJI010000010.1:1..96295;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000010.1	RefSeq	gene	424	1491	.	-	.	ID=gene-RM680_RS08510;Name=RM680_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08510;old_locus_tag=RM680_08515
NZ_JAVRJI010000010.1	Protein Homology	CDS	424	1491	.	-	0	ID=cds-WP_001829773.1;Parent=gene-RM680_RS08510;Dbxref=GenBank:WP_001829773.1;Name=WP_001829773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474092.1;locus_tag=RM680_RS08510;product=P-loop NTPase;protein_id=WP_001829773.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	1640	3079	.	-	.	ID=gene-RM680_RS08515;Name=RM680_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08515;old_locus_tag=RM680_08520
NZ_JAVRJI010000010.1	Protein Homology	CDS	1640	3079	.	-	0	ID=cds-WP_001829781.1;Parent=gene-RM680_RS08515;Dbxref=GenBank:WP_001829781.1;Name=WP_001829781.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496347.1;locus_tag=RM680_RS08515;product=MDR family MFS transporter;protein_id=WP_001829781.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	3349	3816	.	-	.	ID=gene-RM680_RS08520;Name=RM680_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08520;old_locus_tag=RM680_08525
NZ_JAVRJI010000010.1	Protein Homology	CDS	3349	3816	.	-	0	ID=cds-WP_001829729.1;Parent=gene-RM680_RS08520;Dbxref=GenBank:WP_001829729.1;Name=WP_001829729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447367.1;locus_tag=RM680_RS08520;product=SepA family multidrug efflux transporter;protein_id=WP_001829729.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	4007	5344	.	-	.	ID=gene-RM680_RS08525;Name=sdrM;gbkey=Gene;gene=sdrM;gene_biotype=protein_coding;locus_tag=RM680_RS08525;old_locus_tag=RM680_08530
NZ_JAVRJI010000010.1	Protein Homology	CDS	4007	5344	.	-	0	ID=cds-WP_001829735.1;Parent=gene-RM680_RS08525;Dbxref=GenBank:WP_001829735.1;Name=WP_001829735.1;gbkey=CDS;gene=sdrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457000.1;locus_tag=RM680_RS08525;product=multidrug efflux MFS transporter SdrM;protein_id=WP_001829735.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	5583	6266	.	-	.	ID=gene-RM680_RS08530;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=RM680_RS08530;old_locus_tag=RM680_08535
NZ_JAVRJI010000010.1	Protein Homology	CDS	5583	6266	.	-	0	ID=cds-WP_001829724.1;Parent=gene-RM680_RS08530;Dbxref=GenBank:WP_001829724.1;Name=WP_001829724.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500893.1;locus_tag=RM680_RS08530;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_001829724.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	6285	7472	.	-	.	ID=gene-RM680_RS08535;Name=RM680_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08535;old_locus_tag=RM680_08540
NZ_JAVRJI010000010.1	Protein Homology	CDS	6285	7472	.	-	0	ID=cds-WP_002456999.1;Parent=gene-RM680_RS08535;Dbxref=GenBank:WP_002456999.1;Name=WP_002456999.1;Ontology_term=GO:0070569;gbkey=CDS;go_function=uridylyltransferase activity|0070569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500894.1;locus_tag=RM680_RS08535;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_002456999.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	7527	8036	.	-	.	ID=gene-RM680_RS08540;Name=RM680_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08540;old_locus_tag=RM680_08545
NZ_JAVRJI010000010.1	Protein Homology	CDS	7527	8036	.	-	0	ID=cds-WP_001829793.1;Parent=gene-RM680_RS08540;Dbxref=GenBank:WP_001829793.1;Name=WP_001829793.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020365533.1;locus_tag=RM680_RS08540;product=metal-dependent hydrolase;protein_id=WP_001829793.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	8213	8473	.	+	.	ID=gene-RM680_RS08545;Name=RM680_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08545;old_locus_tag=RM680_08550
NZ_JAVRJI010000010.1	Protein Homology	CDS	8213	8473	.	+	0	ID=cds-WP_001829752.1;Parent=gene-RM680_RS08545;Dbxref=GenBank:WP_001829752.1;Name=WP_001829752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500896.1;locus_tag=RM680_RS08545;product=SunI/YnzG family protein;protein_id=WP_001829752.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	8626	8940	.	+	.	ID=gene-RM680_RS08550;Name=RM680_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08550;old_locus_tag=RM680_08555
NZ_JAVRJI010000010.1	Protein Homology	CDS	8626	8940	.	+	0	ID=cds-WP_001829739.1;Parent=gene-RM680_RS08550;Dbxref=GenBank:WP_001829739.1;Name=WP_001829739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447362.1;locus_tag=RM680_RS08550;product=heme oxygenase;protein_id=WP_001829739.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	9119	10492	.	-	.	ID=gene-RM680_RS08555;Name=RM680_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08555;old_locus_tag=RM680_08560
NZ_JAVRJI010000010.1	Protein Homology	CDS	9119	10492	.	-	0	ID=cds-WP_002484860.1;Parent=gene-RM680_RS08555;Dbxref=GenBank:WP_002484860.1;Name=WP_002484860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503688.1;locus_tag=RM680_RS08555;product=YjiH family protein;protein_id=WP_002484860.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	10789	11754	.	-	.	ID=gene-RM680_RS08560;Name=RM680_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08560;old_locus_tag=RM680_08565
NZ_JAVRJI010000010.1	Protein Homology	CDS	10789	11754	.	-	0	ID=cds-WP_001829779.1;Parent=gene-RM680_RS08560;Dbxref=GenBank:WP_001829779.1;Name=WP_001829779.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447360.1;locus_tag=RM680_RS08560;product=FecCD family ABC transporter permease;protein_id=WP_001829779.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	11751	12782	.	-	.	ID=gene-RM680_RS08565;Name=RM680_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08565;old_locus_tag=RM680_08570
NZ_JAVRJI010000010.1	Protein Homology	CDS	11751	12782	.	-	0	ID=cds-WP_001832732.1;Parent=gene-RM680_RS08565;Dbxref=GenBank:WP_001832732.1;Name=WP_001832732.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832732.1;locus_tag=RM680_RS08565;product=FecCD family ABC transporter permease;protein_id=WP_001832732.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	12794	13789	.	-	.	ID=gene-RM680_RS08570;Name=RM680_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08570;old_locus_tag=RM680_08575
NZ_JAVRJI010000010.1	Protein Homology	CDS	12794	13789	.	-	0	ID=cds-WP_001832728.1;Parent=gene-RM680_RS08570;Dbxref=GenBank:WP_001832728.1;Name=WP_001832728.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476062.1;locus_tag=RM680_RS08570;product=ABC transporter substrate-binding protein;protein_id=WP_001832728.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	13991	15052	.	-	.	ID=gene-RM680_RS08575;Name=RM680_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08575;old_locus_tag=RM680_08580
NZ_JAVRJI010000010.1	Protein Homology	CDS	13991	15052	.	-	0	ID=cds-WP_001829764.1;Parent=gene-RM680_RS08575;Dbxref=GenBank:WP_001829764.1;Name=WP_001829764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498584.1;locus_tag=RM680_RS08575;product=alanine/ornithine racemase family PLP-dependent enzyme;protein_id=WP_001829764.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	15056	16813	.	-	.	ID=gene-RM680_RS08580;Name=RM680_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08580;old_locus_tag=RM680_08585
NZ_JAVRJI010000010.1	Protein Homology	CDS	15056	16813	.	-	0	ID=cds-WP_002500598.1;Parent=gene-RM680_RS08580;Dbxref=GenBank:WP_002500598.1;Name=WP_002500598.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458397.1;locus_tag=RM680_RS08580;product=IucA/IucC family protein;protein_id=WP_002500598.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	16803	17984	.	-	.	ID=gene-RM680_RS08585;Name=RM680_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08585;old_locus_tag=RM680_08590
NZ_JAVRJI010000010.1	Protein Homology	CDS	16803	17984	.	-	0	ID=cds-WP_001829750.1;Parent=gene-RM680_RS08585;Dbxref=GenBank:WP_001829750.1;Name=WP_001829750.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020359702.1;locus_tag=RM680_RS08585;product=MFS transporter;protein_id=WP_001829750.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	18087	20048	.	+	.	ID=gene-RM680_RS08590;Name=RM680_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08590;old_locus_tag=RM680_08595
NZ_JAVRJI010000010.1	Protein Homology	CDS	18087	20048	.	+	0	ID=cds-WP_311563561.1;Parent=gene-RM680_RS08590;Dbxref=GenBank:WP_311563561.1;Name=WP_311563561.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485392.1;locus_tag=RM680_RS08590;product=IucA/IucC family protein;protein_id=WP_311563561.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	20109	20609	.	-	.	ID=gene-RM680_RS08595;Name=RM680_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08595;old_locus_tag=RM680_08600
NZ_JAVRJI010000010.1	Protein Homology	CDS	20109	20609	.	-	0	ID=cds-WP_001829780.1;Parent=gene-RM680_RS08595;Dbxref=GenBank:WP_001829780.1;Name=WP_001829780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500909.1;locus_tag=RM680_RS08595;product=Asp23/Gls24 family envelope stress response protein;protein_id=WP_001829780.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	20683	20922	.	-	.	ID=gene-RM680_RS08600;Name=RM680_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08600;old_locus_tag=RM680_08605
NZ_JAVRJI010000010.1	Protein Homology	CDS	20683	20922	.	-	0	ID=cds-WP_001829717.1;Parent=gene-RM680_RS08600;Dbxref=GenBank:WP_001829717.1;Name=WP_001829717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500910.1;locus_tag=RM680_RS08600;product=DUF2273 domain-containing protein;protein_id=WP_001829717.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	20935	21471	.	-	.	ID=gene-RM680_RS08605;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=RM680_RS08605;old_locus_tag=RM680_08610
NZ_JAVRJI010000010.1	Protein Homology	CDS	20935	21471	.	-	0	ID=cds-WP_001829712.1;Parent=gene-RM680_RS08605;Dbxref=GenBank:WP_001829712.1;Name=WP_001829712.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500911.1;locus_tag=RM680_RS08605;product=alkaline shock response membrane anchor protein AmaP;protein_id=WP_001829712.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	22267	23277	.	-	.	ID=gene-RM680_RS08610;Name=RM680_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08610;old_locus_tag=RM680_08615
NZ_JAVRJI010000010.1	Protein Homology	CDS	22267	23277	.	-	0	ID=cds-WP_002456995.1;Parent=gene-RM680_RS08610;Dbxref=GenBank:WP_002456995.1;Name=WP_002456995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485388.1;locus_tag=RM680_RS08610;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_002456995.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	23376	24380	.	-	.	ID=gene-RM680_RS08615;Name=RM680_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08615;old_locus_tag=RM680_08620
NZ_JAVRJI010000010.1	Protein Homology	CDS	23376	24380	.	-	0	ID=cds-WP_001829756.1;Parent=gene-RM680_RS08615;Dbxref=GenBank:WP_001829756.1;Name=WP_001829756.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829756.1;locus_tag=RM680_RS08615;product=NADP-dependent oxidoreductase;protein_id=WP_001829756.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	24513	25538	.	+	.	ID=gene-RM680_RS08620;Name=RM680_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08620;old_locus_tag=RM680_08625
NZ_JAVRJI010000010.1	Protein Homology	CDS	24513	25538	.	+	0	ID=cds-WP_002456994.1;Parent=gene-RM680_RS08620;Dbxref=GenBank:WP_002456994.1;Name=WP_002456994.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456994.1;locus_tag=RM680_RS08620;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_002456994.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	25615	26481	.	-	.	ID=gene-RM680_RS08625;Name=RM680_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08625;old_locus_tag=RM680_08630
NZ_JAVRJI010000010.1	Protein Homology	CDS	25615	26481	.	-	0	ID=cds-WP_002438596.1;Parent=gene-RM680_RS08625;Dbxref=GenBank:WP_002438596.1;Name=WP_002438596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494152.1;locus_tag=RM680_RS08625;product=alpha/beta hydrolase;protein_id=WP_002438596.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	26752	28164	.	-	.	ID=gene-RM680_RS08630;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=protein_coding;locus_tag=RM680_RS08630;old_locus_tag=RM680_08635
NZ_JAVRJI010000010.1	Protein Homology	CDS	26752	28164	.	-	0	ID=cds-WP_001832731.1;Parent=gene-RM680_RS08630;Dbxref=GenBank:WP_001832731.1;Name=WP_001832731.1;Ontology_term=GO:0019512,GO:0033920;gbkey=CDS;gene=lacG;go_function=6-phospho-beta-galactosidase activity|0033920||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500916.1;locus_tag=RM680_RS08630;product=6-phospho-beta-galactosidase;protein_id=WP_001832731.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	28180	29928	.	-	.	ID=gene-RM680_RS08635;Name=RM680_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08635;old_locus_tag=RM680_08640
NZ_JAVRJI010000010.1	Protein Homology	CDS	28180	29928	.	-	0	ID=cds-WP_001829731.1;Parent=gene-RM680_RS08635;Dbxref=GenBank:WP_001829731.1;Name=WP_001829731.1;Ontology_term=GO:0009401,GO:0015155,GO:0016020,GO:0019197;gbkey=CDS;go_component=membrane|0016020||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase complex|0019197||IEA;go_function=lactose transmembrane transporter activity|0015155||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467759.1;locus_tag=RM680_RS08635;product=lactose-specific PTS transporter subunit EIIC;protein_id=WP_001829731.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	29934	30248	.	-	.	ID=gene-RM680_RS08640;Name=RM680_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08640;old_locus_tag=RM680_08645
NZ_JAVRJI010000010.1	Protein Homology	CDS	29934	30248	.	-	0	ID=cds-WP_001829758.1;Parent=gene-RM680_RS08640;Dbxref=GenBank:WP_001829758.1;Name=WP_001829758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174827.1;locus_tag=RM680_RS08640;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_001829758.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	30268	31245	.	-	.	ID=gene-RM680_RS08645;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=RM680_RS08645;old_locus_tag=RM680_08650
NZ_JAVRJI010000010.1	Protein Homology	CDS	30268	31245	.	-	0	ID=cds-WP_002456993.1;Parent=gene-RM680_RS08645;Dbxref=GenBank:WP_002456993.1;Name=WP_002456993.1;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456993.1;locus_tag=RM680_RS08645;product=tagatose-bisphosphate aldolase;protein_id=WP_002456993.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	31249	32181	.	-	.	ID=gene-RM680_RS08650;Name=RM680_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08650;old_locus_tag=RM680_08655
NZ_JAVRJI010000010.1	Protein Homology	CDS	31249	32181	.	-	0	ID=cds-WP_001829786.1;Parent=gene-RM680_RS08650;Dbxref=GenBank:WP_001829786.1;Name=WP_001829786.1;Ontology_term=GO:0019512,GO:0009024;gbkey=CDS;go_function=tagatose-6-phosphate kinase activity|0009024||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829786.1;locus_tag=RM680_RS08650;product=tagatose-6-phosphate kinase;protein_id=WP_001829786.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	32194	32709	.	-	.	ID=gene-RM680_RS08655;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=RM680_RS08655;old_locus_tag=RM680_08660
NZ_JAVRJI010000010.1	Protein Homology	CDS	32194	32709	.	-	0	ID=cds-WP_311563562.1;Parent=gene-RM680_RS08655;Dbxref=GenBank:WP_311563562.1;Name=WP_311563562.1;Ontology_term=GO:0019512,GO:0016861,GO:0050044;gbkey=CDS;gene=lacB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA,galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500921.1;locus_tag=RM680_RS08655;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WP_311563562.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	32724	33152	.	-	.	ID=gene-RM680_RS08660;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=RM680_RS08660;old_locus_tag=RM680_08665
NZ_JAVRJI010000010.1	Protein Homology	CDS	32724	33152	.	-	0	ID=cds-WP_001829760.1;Parent=gene-RM680_RS08660;Dbxref=GenBank:WP_001829760.1;Name=WP_001829760.1;Ontology_term=GO:0019512,GO:0050044;gbkey=CDS;gene=lacA;go_function=galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500922.1;locus_tag=RM680_RS08660;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WP_001829760.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	33519	34274	.	-	.	ID=gene-RM680_RS08665;Name=RM680_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08665;old_locus_tag=RM680_08670
NZ_JAVRJI010000010.1	Protein Homology	CDS	33519	34274	.	-	0	ID=cds-WP_001829761.1;Parent=gene-RM680_RS08665;Dbxref=GenBank:WP_001829761.1;Name=WP_001829761.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020359644.1;locus_tag=RM680_RS08665;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_001829761.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	34574	35314	.	+	.	ID=gene-RM680_RS08670;Name=RM680_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08670;old_locus_tag=RM680_08675
NZ_JAVRJI010000010.1	Protein Homology	CDS	34574	35314	.	+	0	ID=cds-WP_001829706.1;Parent=gene-RM680_RS08670;Dbxref=GenBank:WP_001829706.1;Name=WP_001829706.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein lysine deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494149.1;locus_tag=RM680_RS08670;product=NAD-dependent protein deacylase;protein_id=WP_001829706.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	35576	35968	.	-	.	ID=gene-RM680_RS08675;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=RM680_RS08675;old_locus_tag=RM680_08680
NZ_JAVRJI010000010.1	Protein Homology	CDS	35576	35968	.	-	0	ID=cds-WP_001829714.1;Parent=gene-RM680_RS08675;Dbxref=GenBank:WP_001829714.1;Name=WP_001829714.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1;locus_tag=RM680_RS08675;product=30S ribosomal protein S9;protein_id=WP_001829714.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	35988	36425	.	-	.	ID=gene-RM680_RS08680;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=RM680_RS08680;old_locus_tag=RM680_08685
NZ_JAVRJI010000010.1	Protein Homology	CDS	35988	36425	.	-	0	ID=cds-WP_002469355.1;Parent=gene-RM680_RS08680;Dbxref=GenBank:WP_002469355.1;Name=WP_002469355.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468667.1;locus_tag=RM680_RS08680;product=50S ribosomal protein L13;protein_id=WP_002469355.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	36686	37489	.	-	.	ID=gene-RM680_RS08685;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=RM680_RS08685;old_locus_tag=RM680_08690
NZ_JAVRJI010000010.1	Protein Homology	CDS	36686	37489	.	-	0	ID=cds-WP_002456990.1;Parent=gene-RM680_RS08685;Dbxref=GenBank:WP_002456990.1;Name=WP_002456990.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456990.1;locus_tag=RM680_RS08685;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_002456990.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	37493	38299	.	-	.	ID=gene-RM680_RS08690;Name=RM680_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08690;old_locus_tag=RM680_08695
NZ_JAVRJI010000010.1	Protein Homology	CDS	37493	38299	.	-	0	ID=cds-WP_002456989.1;Parent=gene-RM680_RS08690;Dbxref=GenBank:WP_002456989.1;Name=WP_002456989.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447338.1;locus_tag=RM680_RS08690;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_002456989.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	38289	39149	.	-	.	ID=gene-RM680_RS08695;Name=RM680_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08695;old_locus_tag=RM680_08700
NZ_JAVRJI010000010.1	Protein Homology	CDS	38289	39149	.	-	0	ID=cds-WP_002456988.1;Parent=gene-RM680_RS08695;Dbxref=GenBank:WP_002456988.1;Name=WP_002456988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456988.1;locus_tag=RM680_RS08695;product=energy-coupling factor transporter ATPase;protein_id=WP_002456988.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	39146	39955	.	-	.	ID=gene-RM680_RS08700;Name=RM680_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08700;old_locus_tag=RM680_08705
NZ_JAVRJI010000010.1	Protein Homology	CDS	39146	39955	.	-	0	ID=cds-WP_001829728.1;Parent=gene-RM680_RS08700;Dbxref=GenBank:WP_001829728.1;Name=WP_001829728.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469356.1;locus_tag=RM680_RS08700;product=energy-coupling factor transporter ATPase;protein_id=WP_001829728.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	40286	40654	.	-	.	ID=gene-RM680_RS08705;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=RM680_RS08705;old_locus_tag=RM680_08710
NZ_JAVRJI010000010.1	Protein Homology	CDS	40286	40654	.	-	0	ID=cds-WP_001829718.1;Parent=gene-RM680_RS08705;Dbxref=GenBank:WP_001829718.1;Name=WP_001829718.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450507.1;locus_tag=RM680_RS08705;product=50S ribosomal protein L17;protein_id=WP_001829718.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	40671	41615	.	-	.	ID=gene-RM680_RS08710;Name=RM680_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08710;old_locus_tag=RM680_08715
NZ_JAVRJI010000010.1	Protein Homology	CDS	40671	41615	.	-	0	ID=cds-WP_001829787.1;Parent=gene-RM680_RS08710;Dbxref=GenBank:WP_001829787.1;Name=WP_001829787.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302606.1;locus_tag=RM680_RS08710;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_001829787.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	41692	42081	.	-	.	ID=gene-RM680_RS08715;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=RM680_RS08715;old_locus_tag=RM680_08720
NZ_JAVRJI010000010.1	Protein Homology	CDS	41692	42081	.	-	0	ID=cds-WP_001829725.1;Parent=gene-RM680_RS08715;Dbxref=GenBank:WP_001829725.1;Name=WP_001829725.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998822.1;locus_tag=RM680_RS08715;product=30S ribosomal protein S11;protein_id=WP_001829725.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	42104	42469	.	-	.	ID=gene-RM680_RS08720;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=RM680_RS08720;old_locus_tag=RM680_08725
NZ_JAVRJI010000010.1	Protein Homology	CDS	42104	42469	.	-	0	ID=cds-WP_001829703.1;Parent=gene-RM680_RS08720;Dbxref=GenBank:WP_001829703.1;Name=WP_001829703.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=RM680_RS08720;product=30S ribosomal protein S13;protein_id=WP_001829703.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	42492	42605	.	-	.	ID=gene-RM680_RS08725;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=RM680_RS08725;old_locus_tag=RM680_08730
NZ_JAVRJI010000010.1	Protein Homology	CDS	42492	42605	.	-	0	ID=cds-WP_001829709.1;Parent=gene-RM680_RS08725;Dbxref=GenBank:WP_001829709.1;Name=WP_001829709.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=RM680_RS08725;product=50S ribosomal protein L36;protein_id=WP_001829709.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	42637	42855	.	-	.	ID=gene-RM680_RS08730;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=RM680_RS08730;old_locus_tag=RM680_08735
NZ_JAVRJI010000010.1	Protein Homology	CDS	42637	42855	.	-	0	ID=cds-WP_001829792.1;Parent=gene-RM680_RS08730;Dbxref=GenBank:WP_001829792.1;Name=WP_001829792.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720929.1;locus_tag=RM680_RS08730;product=translation initiation factor IF-1;protein_id=WP_001829792.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	43043	43690	.	-	.	ID=gene-RM680_RS08735;Name=RM680_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08735;old_locus_tag=RM680_08740
NZ_JAVRJI010000010.1	Protein Homology	CDS	43043	43690	.	-	0	ID=cds-WP_001829774.1;Parent=gene-RM680_RS08735;Dbxref=GenBank:WP_001829774.1;Name=WP_001829774.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500958.1;locus_tag=RM680_RS08735;product=adenylate kinase;protein_id=WP_001829774.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	43708	45000	.	-	.	ID=gene-RM680_RS08740;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=RM680_RS08740;old_locus_tag=RM680_08745
NZ_JAVRJI010000010.1	Protein Homology	CDS	43708	45000	.	-	0	ID=cds-WP_001829707.1;Parent=gene-RM680_RS08740;Dbxref=GenBank:WP_001829707.1;Name=WP_001829707.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500959.1;locus_tag=RM680_RS08740;product=preprotein translocase subunit SecY;protein_id=WP_001829707.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	45000	45440	.	-	.	ID=gene-RM680_RS08745;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=RM680_RS08745;old_locus_tag=RM680_08750
NZ_JAVRJI010000010.1	Protein Homology	CDS	45000	45440	.	-	0	ID=cds-WP_001829796.1;Parent=gene-RM680_RS08745;Dbxref=GenBank:WP_001829796.1;Name=WP_001829796.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500960.1;locus_tag=RM680_RS08745;product=50S ribosomal protein L15;protein_id=WP_001829796.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	45457	45639	.	-	.	ID=gene-RM680_RS08750;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=RM680_RS08750;old_locus_tag=RM680_08755
NZ_JAVRJI010000010.1	Protein Homology	CDS	45457	45639	.	-	0	ID=cds-WP_001829711.1;Parent=gene-RM680_RS08750;Dbxref=GenBank:WP_001829711.1;Name=WP_001829711.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829711.1;locus_tag=RM680_RS08750;product=50S ribosomal protein L30;protein_id=WP_001829711.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	45656	46156	.	-	.	ID=gene-RM680_RS08755;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=RM680_RS08755;old_locus_tag=RM680_08760
NZ_JAVRJI010000010.1	Protein Homology	CDS	45656	46156	.	-	0	ID=cds-WP_001829701.1;Parent=gene-RM680_RS08755;Dbxref=GenBank:WP_001829701.1;Name=WP_001829701.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426364.1;locus_tag=RM680_RS08755;product=30S ribosomal protein S5;protein_id=WP_001829701.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	46176	46538	.	-	.	ID=gene-RM680_RS08760;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=RM680_RS08760;old_locus_tag=RM680_08765
NZ_JAVRJI010000010.1	Protein Homology	CDS	46176	46538	.	-	0	ID=cds-WP_001829747.1;Parent=gene-RM680_RS08760;Dbxref=GenBank:WP_001829747.1;Name=WP_001829747.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275136.1;locus_tag=RM680_RS08760;product=50S ribosomal protein L18;protein_id=WP_001829747.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	46570	47106	.	-	.	ID=gene-RM680_RS08765;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=RM680_RS08765;old_locus_tag=RM680_08770
NZ_JAVRJI010000010.1	Protein Homology	CDS	46570	47106	.	-	0	ID=cds-WP_001829740.1;Parent=gene-RM680_RS08765;Dbxref=GenBank:WP_001829740.1;Name=WP_001829740.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829740.1;locus_tag=RM680_RS08765;product=50S ribosomal protein L6;protein_id=WP_001829740.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	47131	47529	.	-	.	ID=gene-RM680_RS08770;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=RM680_RS08770;old_locus_tag=RM680_08775
NZ_JAVRJI010000010.1	Protein Homology	CDS	47131	47529	.	-	0	ID=cds-WP_001829768.1;Parent=gene-RM680_RS08770;Dbxref=GenBank:WP_001829768.1;Name=WP_001829768.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=RM680_RS08770;product=30S ribosomal protein S8;protein_id=WP_001829768.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	47560	47745	.	-	.	ID=gene-RM680_RS08775;Name=RM680_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08775;old_locus_tag=RM680_08780
NZ_JAVRJI010000010.1	Protein Homology	CDS	47560	47745	.	-	0	ID=cds-WP_001829713.1;Parent=gene-RM680_RS08775;Dbxref=GenBank:WP_001829713.1;Name=WP_001829713.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=RM680_RS08775;product=type Z 30S ribosomal protein S14;protein_id=WP_001829713.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	47768	48307	.	-	.	ID=gene-RM680_RS08780;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=RM680_RS08780;old_locus_tag=RM680_08785
NZ_JAVRJI010000010.1	Protein Homology	CDS	47768	48307	.	-	0	ID=cds-WP_001829778.1;Parent=gene-RM680_RS08780;Dbxref=GenBank:WP_001829778.1;Name=WP_001829778.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275133.1;locus_tag=RM680_RS08780;product=50S ribosomal protein L5;protein_id=WP_001829778.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	48333	48650	.	-	.	ID=gene-RM680_RS08785;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=RM680_RS08785;old_locus_tag=RM680_08790
NZ_JAVRJI010000010.1	Protein Homology	CDS	48333	48650	.	-	0	ID=cds-WP_001829762.1;Parent=gene-RM680_RS08785;Dbxref=GenBank:WP_001829762.1;Name=WP_001829762.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500968.1;locus_tag=RM680_RS08785;product=50S ribosomal protein L24;protein_id=WP_001829762.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	48692	49060	.	-	.	ID=gene-RM680_RS08790;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=RM680_RS08790;old_locus_tag=RM680_08795
NZ_JAVRJI010000010.1	Protein Homology	CDS	48692	49060	.	-	0	ID=cds-WP_001829742.1;Parent=gene-RM680_RS08790;Dbxref=GenBank:WP_001829742.1;Name=WP_001829742.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=RM680_RS08790;product=50S ribosomal protein L14;protein_id=WP_001829742.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	49091	49354	.	-	.	ID=gene-RM680_RS08795;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=RM680_RS08795;old_locus_tag=RM680_08800
NZ_JAVRJI010000010.1	Protein Homology	CDS	49091	49354	.	-	0	ID=cds-WP_001829723.1;Parent=gene-RM680_RS08795;Dbxref=GenBank:WP_001829723.1;Name=WP_001829723.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=RM680_RS08795;product=30S ribosomal protein S17;protein_id=WP_001829723.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	49379	49588	.	-	.	ID=gene-RM680_RS08800;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=RM680_RS08800;old_locus_tag=RM680_08805
NZ_JAVRJI010000010.1	Protein Homology	CDS	49379	49588	.	-	0	ID=cds-WP_000644737.1;Parent=gene-RM680_RS08800;Dbxref=GenBank:WP_000644737.1;Name=WP_000644737.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509269.1;locus_tag=RM680_RS08800;product=50S ribosomal protein L29;protein_id=WP_000644737.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	49578	50012	.	-	.	ID=gene-RM680_RS08805;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=RM680_RS08805;old_locus_tag=RM680_08810
NZ_JAVRJI010000010.1	Protein Homology	CDS	49578	50012	.	-	0	ID=cds-WP_001829782.1;Parent=gene-RM680_RS08805;Dbxref=GenBank:WP_001829782.1;Name=WP_001829782.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1;locus_tag=RM680_RS08805;product=50S ribosomal protein L16;protein_id=WP_001829782.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	50015	50668	.	-	.	ID=gene-RM680_RS08810;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=RM680_RS08810;old_locus_tag=RM680_08815
NZ_JAVRJI010000010.1	Protein Homology	CDS	50015	50668	.	-	0	ID=cds-WP_001829791.1;Parent=gene-RM680_RS08810;Dbxref=GenBank:WP_001829791.1;Name=WP_001829791.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500973.1;locus_tag=RM680_RS08810;product=30S ribosomal protein S3;protein_id=WP_001829791.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	50692	51045	.	-	.	ID=gene-RM680_RS08815;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=RM680_RS08815;old_locus_tag=RM680_08820
NZ_JAVRJI010000010.1	Protein Homology	CDS	50692	51045	.	-	0	ID=cds-WP_001829734.1;Parent=gene-RM680_RS08815;Dbxref=GenBank:WP_001829734.1;Name=WP_001829734.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1;locus_tag=RM680_RS08815;product=50S ribosomal protein L22;protein_id=WP_001829734.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	51073	51351	.	-	.	ID=gene-RM680_RS08820;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=RM680_RS08820;old_locus_tag=RM680_08825
NZ_JAVRJI010000010.1	Protein Homology	CDS	51073	51351	.	-	0	ID=cds-WP_001829710.1;Parent=gene-RM680_RS08820;Dbxref=GenBank:WP_001829710.1;Name=WP_001829710.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=RM680_RS08820;product=30S ribosomal protein S19;protein_id=WP_001829710.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	51418	52251	.	-	.	ID=gene-RM680_RS08825;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=RM680_RS08825;old_locus_tag=RM680_08830
NZ_JAVRJI010000010.1	Protein Homology	CDS	51418	52251	.	-	0	ID=cds-WP_001829788.1;Parent=gene-RM680_RS08825;Dbxref=GenBank:WP_001829788.1;Name=WP_001829788.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500976.1;locus_tag=RM680_RS08825;product=50S ribosomal protein L2;protein_id=WP_001829788.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	52280	52555	.	-	.	ID=gene-RM680_RS08830;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=RM680_RS08830;old_locus_tag=RM680_08835
NZ_JAVRJI010000010.1	Protein Homology	CDS	52280	52555	.	-	0	ID=cds-WP_001829755.1;Parent=gene-RM680_RS08830;Dbxref=GenBank:WP_001829755.1;Name=WP_001829755.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506966.1;locus_tag=RM680_RS08830;product=50S ribosomal protein L23;protein_id=WP_001829755.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	52555	53178	.	-	.	ID=gene-RM680_RS08835;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=RM680_RS08835;old_locus_tag=RM680_08840
NZ_JAVRJI010000010.1	Protein Homology	CDS	52555	53178	.	-	0	ID=cds-WP_001829775.1;Parent=gene-RM680_RS08835;Dbxref=GenBank:WP_001829775.1;Name=WP_001829775.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467756.1;locus_tag=RM680_RS08835;product=50S ribosomal protein L4;protein_id=WP_001829775.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	53207	53869	.	-	.	ID=gene-RM680_RS08840;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=RM680_RS08840;old_locus_tag=RM680_08845
NZ_JAVRJI010000010.1	Protein Homology	CDS	53207	53869	.	-	0	ID=cds-WP_001829727.1;Parent=gene-RM680_RS08840;Dbxref=GenBank:WP_001829727.1;Name=WP_001829727.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000160215.1;locus_tag=RM680_RS08840;product=50S ribosomal protein L3;protein_id=WP_001829727.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	53897	54205	.	-	.	ID=gene-RM680_RS08845;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=RM680_RS08845;old_locus_tag=RM680_08850
NZ_JAVRJI010000010.1	Protein Homology	CDS	53897	54205	.	-	0	ID=cds-WP_001118666.1;Parent=gene-RM680_RS08845;Dbxref=GenBank:WP_001118666.1;Name=WP_001118666.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=RM680_RS08845;product=30S ribosomal protein S10;protein_id=WP_001118666.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	54561	54959	.	+	.	ID=gene-RM680_RS08850;Name=RM680_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08850;old_locus_tag=RM680_08855
NZ_JAVRJI010000010.1	Protein Homology	CDS	54561	54959	.	+	0	ID=cds-WP_001829776.1;Parent=gene-RM680_RS08850;Dbxref=GenBank:WP_001829776.1;Name=WP_001829776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467751.1;locus_tag=RM680_RS08850;product=hypothetical protein;protein_id=WP_001829776.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	55016	56350	.	-	.	ID=gene-RM680_RS08855;Name=RM680_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08855;old_locus_tag=RM680_08860
NZ_JAVRJI010000010.1	Protein Homology	CDS	55016	56350	.	-	0	ID=cds-WP_001829757.1;Parent=gene-RM680_RS08855;Dbxref=GenBank:WP_001829757.1;Name=WP_001829757.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447326.1;locus_tag=RM680_RS08855;product=NCS2 family permease;protein_id=WP_001829757.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	56463	58598	.	-	.	ID=gene-RM680_RS08860;Name=RM680_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08860;old_locus_tag=RM680_08865
NZ_JAVRJI010000010.1	Protein Homology	CDS	56463	58598	.	-	0	ID=cds-WP_001829767.1;Parent=gene-RM680_RS08860;Dbxref=GenBank:WP_001829767.1;Name=WP_001829767.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475810.1;locus_tag=RM680_RS08860;product=DNA topoisomerase III;protein_id=WP_001829767.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	58889	59752	.	+	.	ID=gene-RM680_RS08865;Name=RM680_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08865;old_locus_tag=RM680_08870
NZ_JAVRJI010000010.1	Protein Homology	CDS	58889	59752	.	+	0	ID=cds-WP_311563563.1;Parent=gene-RM680_RS08865;Dbxref=GenBank:WP_311563563.1;Name=WP_311563563.1;Ontology_term=GO:0034219,GO:0015144,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500985.1;locus_tag=RM680_RS08865;product=GRP family sugar transporter;protein_id=WP_311563563.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	59780	60571	.	+	.	ID=gene-RM680_RS08870;Name=RM680_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08870;old_locus_tag=RM680_08875
NZ_JAVRJI010000010.1	Protein Homology	CDS	59780	60571	.	+	0	ID=cds-WP_001829726.1;Parent=gene-RM680_RS08870;Dbxref=GenBank:WP_001829726.1;Name=WP_001829726.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829726.1;locus_tag=RM680_RS08870;product=glucose 1-dehydrogenase;protein_id=WP_001829726.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	60766	61674	.	-	.	ID=gene-RM680_RS08875;Name=RM680_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08875;old_locus_tag=RM680_08880
NZ_JAVRJI010000010.1	Protein Homology	CDS	60766	61674	.	-	0	ID=cds-WP_001829745.1;Parent=gene-RM680_RS08875;Dbxref=GenBank:WP_001829745.1;Name=WP_001829745.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487080.1;locus_tag=RM680_RS08875;product=AEC family transporter;protein_id=WP_001829745.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	61816	61986	.	+	.	ID=gene-RM680_RS08880;Name=RM680_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08880;old_locus_tag=RM680_08885
NZ_JAVRJI010000010.1	Protein Homology	CDS	61816	61986	.	+	0	ID=cds-WP_001829790.1;Parent=gene-RM680_RS08880;Dbxref=GenBank:WP_001829790.1;Name=WP_001829790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447321.1;locus_tag=RM680_RS08880;product=SE1832 family protein;protein_id=WP_001829790.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	62278	62595	.	+	.	ID=gene-RM680_RS08885;Name=mspA;gbkey=Gene;gene=mspA;gene_biotype=protein_coding;locus_tag=RM680_RS08885;old_locus_tag=RM680_08890
NZ_JAVRJI010000010.1	Protein Homology	CDS	62278	62595	.	+	0	ID=cds-WP_002438539.1;Parent=gene-RM680_RS08885;Dbxref=GenBank:WP_002438539.1;Name=WP_002438539.1;gbkey=CDS;gene=mspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113631.1;locus_tag=RM680_RS08885;product=membrane stabilizing protein MspA;protein_id=WP_002438539.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	62646	65801	.	-	.	ID=gene-RM680_RS08890;Name=RM680_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08890;old_locus_tag=RM680_08895
NZ_JAVRJI010000010.1	Protein Homology	CDS	62646	65801	.	-	0	ID=cds-WP_002495567.1;Parent=gene-RM680_RS08890;Dbxref=GenBank:WP_002495567.1;Name=WP_002495567.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360201.1;locus_tag=RM680_RS08890;product=efflux RND transporter permease subunit;protein_id=WP_002495567.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	65878	67128	.	-	.	ID=gene-RM680_RS08895;Name=RM680_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08895;old_locus_tag=RM680_08900
NZ_JAVRJI010000010.1	Protein Homology	CDS	65878	67128	.	-	0	ID=cds-WP_002438530.1;Parent=gene-RM680_RS08895;Dbxref=GenBank:WP_002438530.1;Name=WP_002438530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500991.1;locus_tag=RM680_RS08895;product=lipid II:glycine glycyltransferase FemX;protein_id=WP_002438530.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	67528	68289	.	-	.	ID=gene-RM680_RS08905;Name=RM680_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08905;old_locus_tag=RM680_08910
NZ_JAVRJI010000010.1	Protein Homology	CDS	67528	68289	.	-	0	ID=cds-WP_002494671.1;Parent=gene-RM680_RS08905;Dbxref=GenBank:WP_002494671.1;Name=WP_002494671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368278.1;locus_tag=RM680_RS08905;product=VOC family protein;protein_id=WP_002494671.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	68452	68892	.	+	.	ID=gene-RM680_RS08910;Name=RM680_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08910;old_locus_tag=RM680_08915
NZ_JAVRJI010000010.1	Protein Homology	CDS	68452	68892	.	+	0	ID=cds-WP_001829772.1;Parent=gene-RM680_RS08910;Dbxref=GenBank:WP_001829772.1;Name=WP_001829772.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496191.1;locus_tag=RM680_RS08910;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001829772.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	68892	70085	.	+	.	ID=gene-RM680_RS08915;Name=RM680_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08915;old_locus_tag=RM680_08920
NZ_JAVRJI010000010.1	Protein Homology	CDS	68892	70085	.	+	0	ID=cds-WP_002468894.1;Parent=gene-RM680_RS08915;Dbxref=GenBank:WP_002468894.1;Name=WP_002468894.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503707.1;locus_tag=RM680_RS08915;product=MFS transporter;protein_id=WP_002468894.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	pseudogene	70371	70538	.	+	.	ID=gene-RM680_RS08920;Name=RM680_RS08920;end_range=70538,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS08920;old_locus_tag=RM680_08925;partial=true;pseudo=true;start_range=.,70371
NZ_JAVRJI010000010.1	Protein Homology	CDS	70371	70538	.	+	0	ID=cds-RM680_RS08920;Parent=gene-RM680_RS08920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=70538,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494449.1;locus_tag=RM680_RS08920;partial=true;product=transposase;pseudo=true;start_range=.,70371;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	pseudogene	70573	70954	.	+	.	ID=gene-RM680_RS08925;Name=RM680_RS08925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS08925;old_locus_tag=RM680_08930;partial=true;pseudo=true;start_range=.,70573
NZ_JAVRJI010000010.1	Protein Homology	CDS	70573	70954	.	+	0	ID=cds-RM680_RS08925;Parent=gene-RM680_RS08925;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082549.1;locus_tag=RM680_RS08925;partial=true;product=transposase;pseudo=true;start_range=.,70573;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	70951	71301	.	-	.	ID=gene-RM680_RS08930;Name=RM680_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08930;old_locus_tag=RM680_08935
NZ_JAVRJI010000010.1	Protein Homology	CDS	70951	71301	.	-	0	ID=cds-WP_001832414.1;Parent=gene-RM680_RS08930;Dbxref=GenBank:WP_001832414.1;Name=WP_001832414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500996.1;locus_tag=RM680_RS08930;product=SarA family transcriptional regulator;protein_id=WP_001832414.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	71703	72725	.	-	.	ID=gene-RM680_RS08935;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=RM680_RS08935;old_locus_tag=RM680_08940
NZ_JAVRJI010000010.1	Protein Homology	CDS	71703	72725	.	-	0	ID=cds-WP_002438521.1;Parent=gene-RM680_RS08935;Dbxref=GenBank:WP_002438521.1;Name=WP_002438521.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501000.1;locus_tag=RM680_RS08935;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_002438521.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	72738	73343	.	-	.	ID=gene-RM680_RS08940;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=RM680_RS08940;old_locus_tag=RM680_08945
NZ_JAVRJI010000010.1	Protein Homology	CDS	72738	73343	.	-	0	ID=cds-WP_001832403.1;Parent=gene-RM680_RS08940;Dbxref=GenBank:WP_001832403.1;Name=WP_001832403.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499564.1;locus_tag=RM680_RS08940;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_001832403.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	73349	73582	.	-	.	ID=gene-RM680_RS08945;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=RM680_RS08945;old_locus_tag=RM680_08950
NZ_JAVRJI010000010.1	Protein Homology	CDS	73349	73582	.	-	0	ID=cds-WP_002438518.1;Parent=gene-RM680_RS08945;Dbxref=GenBank:WP_002438518.1;Name=WP_002438518.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832421.1;locus_tag=RM680_RS08945;product=molybdopterin converting factor subunit 1;protein_id=WP_002438518.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	73579	74031	.	-	.	ID=gene-RM680_RS08950;Name=RM680_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08950;old_locus_tag=RM680_08955
NZ_JAVRJI010000010.1	Protein Homology	CDS	73579	74031	.	-	0	ID=cds-WP_002438516.1;Parent=gene-RM680_RS08950;Dbxref=GenBank:WP_002438516.1;Name=WP_002438516.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447312.1;locus_tag=RM680_RS08950;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_002438516.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	74032	74508	.	-	.	ID=gene-RM680_RS08955;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=RM680_RS08955;old_locus_tag=RM680_08960
NZ_JAVRJI010000010.1	Protein Homology	CDS	74032	74508	.	-	0	ID=cds-WP_002438514.1;Parent=gene-RM680_RS08955;Dbxref=GenBank:WP_002438514.1;Name=WP_002438514.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496186.1;locus_tag=RM680_RS08955;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WP_002438514.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	74505	75764	.	-	.	ID=gene-RM680_RS08960;Name=RM680_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08960;old_locus_tag=RM680_08965
NZ_JAVRJI010000010.1	Protein Homology	CDS	74505	75764	.	-	0	ID=cds-WP_002456088.1;Parent=gene-RM680_RS08960;Dbxref=GenBank:WP_002456088.1;Name=WP_002456088.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457954.1;locus_tag=RM680_RS08960;product=molybdopterin molybdotransferase MoeA;protein_id=WP_002456088.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	75826	76314	.	+	.	ID=gene-RM680_RS08965;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=RM680_RS08965;old_locus_tag=RM680_08970
NZ_JAVRJI010000010.1	Protein Homology	CDS	75826	76314	.	+	0	ID=cds-WP_002438509.1;Parent=gene-RM680_RS08965;Dbxref=GenBank:WP_002438509.1;Name=WP_002438509.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113722.1;locus_tag=RM680_RS08965;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_002438509.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	76375	76905	.	-	.	ID=gene-RM680_RS08970;Name=RM680_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08970;old_locus_tag=RM680_08975
NZ_JAVRJI010000010.1	Protein Homology	CDS	76375	76905	.	-	0	ID=cds-WP_002438508.1;Parent=gene-RM680_RS08970;Dbxref=GenBank:WP_002438508.1;Name=WP_002438508.1;Ontology_term=GO:0006777,GO:0030151,GO:0046872;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA,metal ion binding|0046872||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438508.1;locus_tag=RM680_RS08970;product=MogA/MoaB family molybdenum cofactor biosynthesis protein;protein_id=WP_002438508.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	76926	77927	.	-	.	ID=gene-RM680_RS08975;Name=RM680_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08975;old_locus_tag=RM680_08980
NZ_JAVRJI010000010.1	Protein Homology	CDS	76926	77927	.	-	0	ID=cds-WP_002467748.1;Parent=gene-RM680_RS08975;Dbxref=GenBank:WP_002467748.1;Name=WP_002467748.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465120.1;locus_tag=RM680_RS08975;product=ThiF family adenylyltransferase;protein_id=WP_002467748.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	78003	78623	.	-	.	ID=gene-RM680_RS08980;Name=RM680_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS08980;old_locus_tag=RM680_08985
NZ_JAVRJI010000010.1	Protein Homology	CDS	78003	78623	.	-	0	ID=cds-WP_002495564.1;Parent=gene-RM680_RS08980;Dbxref=GenBank:WP_002495564.1;Name=WP_002495564.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495564.1;locus_tag=RM680_RS08980;product=ATP-binding cassette domain-containing protein;protein_id=WP_002495564.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	78624	79295	.	-	.	ID=gene-RM680_RS08985;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=RM680_RS08985;old_locus_tag=RM680_08990
NZ_JAVRJI010000010.1	Protein Homology	CDS	78624	79295	.	-	0	ID=cds-WP_002438504.1;Parent=gene-RM680_RS08985;Dbxref=GenBank:WP_002438504.1;Name=WP_002438504.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501010.1;locus_tag=RM680_RS08985;product=molybdate ABC transporter permease subunit;protein_id=WP_002438504.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	79309	80094	.	-	.	ID=gene-RM680_RS08990;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=RM680_RS08990;old_locus_tag=RM680_08995
NZ_JAVRJI010000010.1	Protein Homology	CDS	79309	80094	.	-	0	ID=cds-WP_002438502.1;Parent=gene-RM680_RS08990;Dbxref=GenBank:WP_002438502.1;Name=WP_002438502.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500629.1;locus_tag=RM680_RS08990;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_002438502.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	pseudogene	80313	81094	.	+	.	ID=gene-RM680_RS08995;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=pseudogene;locus_tag=RM680_RS08995;old_locus_tag=RM680_09000;pseudo=true
NZ_JAVRJI010000010.1	Protein Homology	CDS	80313	81094	.	+	0	ID=cds-RM680_RS08995;Parent=gene-RM680_RS08995;Note=frameshifted%3B internal stop;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457959.1;locus_tag=RM680_RS08995;product=formate dehydrogenase accessory sulfurtransferase FdhD;pseudo=true;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	81215	81970	.	-	.	ID=gene-RM680_RS09000;Name=RM680_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09000;old_locus_tag=RM680_09005
NZ_JAVRJI010000010.1	Protein Homology	CDS	81215	81970	.	-	0	ID=cds-WP_002438495.1;Parent=gene-RM680_RS09000;Dbxref=GenBank:WP_002438495.1;Name=WP_002438495.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498558.1;locus_tag=RM680_RS09000;product=GNAT family N-acetyltransferase;protein_id=WP_002438495.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	82007	82555	.	-	.	ID=gene-RM680_RS09005;Name=RM680_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09005;old_locus_tag=RM680_09010
NZ_JAVRJI010000010.1	Protein Homology	CDS	82007	82555	.	-	0	ID=cds-WP_001832423.1;Parent=gene-RM680_RS09005;Dbxref=GenBank:WP_001832423.1;Name=WP_001832423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467778.1;locus_tag=RM680_RS09005;product=biotin transporter BioY;protein_id=WP_001832423.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	82665	83606	.	-	.	ID=gene-RM680_RS09010;Name=RM680_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09010;old_locus_tag=RM680_09015
NZ_JAVRJI010000010.1	Protein Homology	CDS	82665	83606	.	-	0	ID=cds-WP_002438493.1;Parent=gene-RM680_RS09010;Dbxref=GenBank:WP_002438493.1;Name=WP_002438493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485393.1;locus_tag=RM680_RS09010;product=nucleoside hydrolase;protein_id=WP_002438493.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	83925	85067	.	-	.	ID=gene-RM680_RS09015;Name=RM680_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09015;old_locus_tag=RM680_09020
NZ_JAVRJI010000010.1	Protein Homology	CDS	83925	85067	.	-	0	ID=cds-WP_002438492.1;Parent=gene-RM680_RS09015;Dbxref=GenBank:WP_002438492.1;Name=WP_002438492.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498556.1;locus_tag=RM680_RS09015;product=acyl-CoA dehydrogenase family protein;protein_id=WP_002438492.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	85500	86402	.	-	.	ID=gene-RM680_RS09020;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=RM680_RS09020;old_locus_tag=RM680_09025
NZ_JAVRJI010000010.1	Protein Homology	CDS	85500	86402	.	-	0	ID=cds-WP_002494676.1;Parent=gene-RM680_RS09020;Dbxref=GenBank:WP_002494676.1;Name=WP_002494676.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502156.1;locus_tag=RM680_RS09020;product=urea transporter;protein_id=WP_002494676.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	86671	86973	.	+	.	ID=gene-RM680_RS09025;Name=RM680_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09025;old_locus_tag=RM680_09030
NZ_JAVRJI010000010.1	Protein Homology	CDS	86671	86973	.	+	0	ID=cds-WP_001832402.1;Parent=gene-RM680_RS09025;Dbxref=GenBank:WP_001832402.1;Name=WP_001832402.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832402.1;locus_tag=RM680_RS09025;product=urease subunit gamma;protein_id=WP_001832402.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	86987	87388	.	+	.	ID=gene-RM680_RS09030;Name=RM680_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09030;old_locus_tag=RM680_09035
NZ_JAVRJI010000010.1	Protein Homology	CDS	86987	87388	.	+	0	ID=cds-WP_001832383.1;Parent=gene-RM680_RS09030;Dbxref=GenBank:WP_001832383.1;Name=WP_001832383.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113463.1;locus_tag=RM680_RS09030;product=urease subunit beta;protein_id=WP_001832383.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	87391	89106	.	+	.	ID=gene-RM680_RS09035;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=RM680_RS09035;old_locus_tag=RM680_09040
NZ_JAVRJI010000010.1	Protein Homology	CDS	87391	89106	.	+	0	ID=cds-WP_001832399.1;Parent=gene-RM680_RS09035;Dbxref=GenBank:WP_001832399.1;Name=WP_001832399.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447295.1;locus_tag=RM680_RS09035;product=urease subunit alpha;protein_id=WP_001832399.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	89120	89572	.	+	.	ID=gene-RM680_RS09040;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=RM680_RS09040;old_locus_tag=RM680_09045
NZ_JAVRJI010000010.1	Protein Homology	CDS	89120	89572	.	+	0	ID=cds-WP_001832382.1;Parent=gene-RM680_RS09040;Dbxref=GenBank:WP_001832382.1;Name=WP_001832382.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501023.1;locus_tag=RM680_RS09040;product=urease accessory protein UreE;protein_id=WP_001832382.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	89565	90254	.	+	.	ID=gene-RM680_RS09045;Name=RM680_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09045;old_locus_tag=RM680_09050
NZ_JAVRJI010000010.1	Protein Homology	CDS	89565	90254	.	+	0	ID=cds-WP_002456972.1;Parent=gene-RM680_RS09045;Dbxref=GenBank:WP_002456972.1;Name=WP_002456972.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501024.1;locus_tag=RM680_RS09045;product=urease accessory protein UreF;protein_id=WP_002456972.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	90267	90881	.	+	.	ID=gene-RM680_RS09050;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=RM680_RS09050;old_locus_tag=RM680_09055
NZ_JAVRJI010000010.1	Protein Homology	CDS	90267	90881	.	+	0	ID=cds-WP_001832410.1;Parent=gene-RM680_RS09050;Dbxref=GenBank:WP_001832410.1;Name=WP_001832410.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501025.1;locus_tag=RM680_RS09050;product=urease accessory protein UreG;protein_id=WP_001832410.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	90881	91717	.	+	.	ID=gene-RM680_RS09055;Name=RM680_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09055;old_locus_tag=RM680_09060
NZ_JAVRJI010000010.1	Protein Homology	CDS	90881	91717	.	+	0	ID=cds-WP_001832418.1;Parent=gene-RM680_RS09055;Dbxref=GenBank:WP_001832418.1;Name=WP_001832418.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832418.1;locus_tag=RM680_RS09055;product=urease accessory protein UreD;protein_id=WP_001832418.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	91822	92166	.	-	.	ID=gene-RM680_RS09060;Name=RM680_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09060;old_locus_tag=RM680_09065
NZ_JAVRJI010000010.1	Protein Homology	CDS	91822	92166	.	-	0	ID=cds-WP_001832412.1;Parent=gene-RM680_RS09060;Dbxref=GenBank:WP_001832412.1;Name=WP_001832412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832412.1;locus_tag=RM680_RS09060;product=SarA family transcriptional regulator;protein_id=WP_001832412.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	92571	92894	.	-	.	ID=gene-RM680_RS09065;Name=RM680_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09065;old_locus_tag=RM680_09070
NZ_JAVRJI010000010.1	Protein Homology	CDS	92571	92894	.	-	0	ID=cds-WP_001832425.1;Parent=gene-RM680_RS09065;Dbxref=GenBank:WP_001832425.1;Name=WP_001832425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487083.1;locus_tag=RM680_RS09065;product=PH domain-containing protein;protein_id=WP_001832425.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	92930	93658	.	-	.	ID=gene-RM680_RS09070;Name=RM680_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09070;old_locus_tag=RM680_09075
NZ_JAVRJI010000010.1	Protein Homology	CDS	92930	93658	.	-	0	ID=cds-WP_002438479.1;Parent=gene-RM680_RS09070;Dbxref=GenBank:WP_002438479.1;Name=WP_002438479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438479.1;locus_tag=RM680_RS09070;product=transcriptional regulator%2C SarA/Rot family;protein_id=WP_002438479.1;transl_table=11
NZ_JAVRJI010000010.1	RefSeq	gene	93697	95670	.	-	.	ID=gene-RM680_RS09075;Name=RM680_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09075;old_locus_tag=RM680_09080
NZ_JAVRJI010000010.1	Protein Homology	CDS	93697	95670	.	-	0	ID=cds-WP_002438477.1;Parent=gene-RM680_RS09075;Dbxref=GenBank:WP_002438477.1;Name=WP_002438477.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476244.1;locus_tag=RM680_RS09075;product=AraC family transcriptional regulator;protein_id=WP_002438477.1;transl_table=11
##sequence-region NZ_JAVRJI010000011.1 1 82458
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000011.1	RefSeq	region	1	82458	.	+	.	ID=NZ_JAVRJI010000011.1:1..82458;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000011.1	RefSeq	gene	4	77	.	-	.	ID=gene-RM680_RS09080;Name=RM680_RS09080;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS09080;old_locus_tag=RM680_09085
NZ_JAVRJI010000011.1	tRNAscan-SE	tRNA	4	77	.	-	.	ID=rna-RM680_RS09080;Parent=gene-RM680_RS09080;anticodon=(pos:complement(43..45));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS09080;product=tRNA-Gly
NZ_JAVRJI010000011.1	tRNAscan-SE	exon	4	77	.	-	.	ID=exon-RM680_RS09080-1;Parent=rna-RM680_RS09080;anticodon=(pos:complement(43..45));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS09080;product=tRNA-Gly
NZ_JAVRJI010000011.1	RefSeq	gene	100	186	.	-	.	ID=gene-RM680_RS09085;Name=RM680_RS09085;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS09085;old_locus_tag=RM680_09090
NZ_JAVRJI010000011.1	tRNAscan-SE	tRNA	100	186	.	-	.	ID=rna-RM680_RS09085;Parent=gene-RM680_RS09085;anticodon=(pos:complement(151..153));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS09085;product=tRNA-Leu
NZ_JAVRJI010000011.1	tRNAscan-SE	exon	100	186	.	-	.	ID=exon-RM680_RS09085-1;Parent=rna-RM680_RS09085;anticodon=(pos:complement(151..153));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS09085;product=tRNA-Leu
NZ_JAVRJI010000011.1	RefSeq	gene	944	1399	.	-	.	ID=gene-RM680_RS09090;Name=RM680_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09090;old_locus_tag=RM680_09095
NZ_JAVRJI010000011.1	Protein Homology	CDS	944	1399	.	-	0	ID=cds-WP_001829897.1;Parent=gene-RM680_RS09090;Dbxref=GenBank:WP_001829897.1;Name=WP_001829897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474634.1;locus_tag=RM680_RS09090;product=SprT family protein;protein_id=WP_001829897.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	1392	3542	.	-	.	ID=gene-RM680_RS09095;Name=RM680_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09095;old_locus_tag=RM680_09100
NZ_JAVRJI010000011.1	Protein Homology	CDS	1392	3542	.	-	0	ID=cds-WP_001832739.1;Parent=gene-RM680_RS09095;Dbxref=GenBank:WP_001832739.1;Name=WP_001832739.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500775.1;locus_tag=RM680_RS09095;product=Tex family protein;protein_id=WP_001832739.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	3830	4600	.	-	.	ID=gene-RM680_RS09100;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=RM680_RS09100;old_locus_tag=RM680_09105
NZ_JAVRJI010000011.1	Protein Homology	CDS	3830	4600	.	-	0	ID=cds-WP_002440602.1;Parent=gene-RM680_RS09100;Dbxref=GenBank:WP_002440602.1;Name=WP_002440602.1;Ontology_term=GO:0006352,GO:0003700,GO:0016987;gbkey=CDS;gene=sigB;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500776.1;locus_tag=RM680_RS09100;product=RNA polymerase sigma factor SigB;protein_id=WP_002440602.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	4575	5054	.	-	.	ID=gene-RM680_RS09105;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=RM680_RS09105;old_locus_tag=RM680_09110
NZ_JAVRJI010000011.1	Protein Homology	CDS	4575	5054	.	-	0	ID=cds-WP_001829903.1;Parent=gene-RM680_RS09105;Dbxref=GenBank:WP_001829903.1;Name=WP_001829903.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474646.1;locus_tag=RM680_RS09105;product=anti-sigma B factor RsbW;protein_id=WP_001829903.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	5056	5382	.	-	.	ID=gene-RM680_RS09110;Name=RM680_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09110;old_locus_tag=RM680_09115
NZ_JAVRJI010000011.1	Protein Homology	CDS	5056	5382	.	-	0	ID=cds-WP_001829952.1;Parent=gene-RM680_RS09110;Dbxref=GenBank:WP_001829952.1;Name=WP_001829952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468012.1;locus_tag=RM680_RS09110;product=anti-sigma factor antagonist;protein_id=WP_001829952.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	5482	6483	.	-	.	ID=gene-RM680_RS09115;Name=RM680_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09115;old_locus_tag=RM680_09120
NZ_JAVRJI010000011.1	Protein Homology	CDS	5482	6483	.	-	0	ID=cds-WP_001829902.1;Parent=gene-RM680_RS09115;Dbxref=GenBank:WP_001829902.1;Name=WP_001829902.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504876.1;locus_tag=RM680_RS09115;product=PP2C family protein-serine/threonine phosphatase;protein_id=WP_001829902.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	6828	7190	.	-	.	ID=gene-RM680_RS09120;Name=RM680_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09120;old_locus_tag=RM680_09125
NZ_JAVRJI010000011.1	Protein Homology	CDS	6828	7190	.	-	0	ID=cds-WP_001829891.1;Parent=gene-RM680_RS09120;Dbxref=GenBank:WP_001829891.1;Name=WP_001829891.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500782.1;locus_tag=RM680_RS09120;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_001829891.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	7187	7357	.	-	.	ID=gene-RM680_RS09125;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=RM680_RS09125;old_locus_tag=RM680_09130
NZ_JAVRJI010000011.1	Protein Homology	CDS	7187	7357	.	-	0	ID=cds-WP_001829931.1;Parent=gene-RM680_RS09125;Dbxref=GenBank:WP_001829931.1;Name=WP_001829931.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500783.1;locus_tag=RM680_RS09125;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WP_001829931.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	7444	8592	.	-	.	ID=gene-RM680_RS09130;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=RM680_RS09130;old_locus_tag=RM680_09135
NZ_JAVRJI010000011.1	Protein Homology	CDS	7444	8592	.	-	0	ID=cds-WP_001829972.1;Parent=gene-RM680_RS09130;Dbxref=GenBank:WP_001829972.1;Name=WP_001829972.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457107.1;locus_tag=RM680_RS09130;product=alanine racemase;protein_id=WP_001829972.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	8658	9011	.	-	.	ID=gene-RM680_RS09135;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=RM680_RS09135;old_locus_tag=RM680_09140
NZ_JAVRJI010000011.1	Protein Homology	CDS	8658	9011	.	-	0	ID=cds-WP_001829915.1;Parent=gene-RM680_RS09135;Dbxref=GenBank:WP_001829915.1;Name=WP_001829915.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498773.1;locus_tag=RM680_RS09135;product=holo-ACP synthase;protein_id=WP_001829915.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	9059	9568	.	-	.	ID=gene-RM680_RS09140;Name=RM680_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09140;old_locus_tag=RM680_09145
NZ_JAVRJI010000011.1	Protein Homology	CDS	9059	9568	.	-	0	ID=cds-WP_001829888.1;Parent=gene-RM680_RS09140;Dbxref=GenBank:WP_001829888.1;Name=WP_001829888.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829888.1;locus_tag=RM680_RS09140;product=PH domain-containing protein;protein_id=WP_001829888.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	9555	11060	.	-	.	ID=gene-RM680_RS09145;Name=RM680_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09145;old_locus_tag=RM680_09150
NZ_JAVRJI010000011.1	Protein Homology	CDS	9555	11060	.	-	0	ID=cds-WP_001829976.1;Parent=gene-RM680_RS09145;Dbxref=GenBank:WP_001829976.1;Name=WP_001829976.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486940.1;locus_tag=RM680_RS09145;product=PH domain-containing protein;protein_id=WP_001829976.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	11053	11532	.	-	.	ID=gene-RM680_RS09150;Name=RM680_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09150;old_locus_tag=RM680_09155
NZ_JAVRJI010000011.1	Protein Homology	CDS	11053	11532	.	-	0	ID=cds-WP_001829909.1;Parent=gene-RM680_RS09150;Dbxref=GenBank:WP_001829909.1;Name=WP_001829909.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829909.1;locus_tag=RM680_RS09150;product=PH domain-containing protein;protein_id=WP_001829909.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	11781	13310	.	-	.	ID=gene-RM680_RS09155;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=RM680_RS09155;old_locus_tag=RM680_09160
NZ_JAVRJI010000011.1	Protein Homology	CDS	11781	13310	.	-	0	ID=cds-WP_001829967.1;Parent=gene-RM680_RS09155;Dbxref=GenBank:WP_001829967.1;Name=WP_001829967.1;gbkey=CDS;gene=cshA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500795.1;locus_tag=RM680_RS09155;product=degradosome RNA helicase CshA;protein_id=WP_001829967.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	13609	14964	.	-	.	ID=gene-RM680_RS09160;Name=RM680_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09160;old_locus_tag=RM680_09165
NZ_JAVRJI010000011.1	Protein Homology	CDS	13609	14964	.	-	0	ID=cds-WP_001832734.1;Parent=gene-RM680_RS09160;Dbxref=GenBank:WP_001832734.1;Name=WP_001832734.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468334.1;locus_tag=RM680_RS09160;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_001832734.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	14976	16049	.	-	.	ID=gene-RM680_RS09165;Name=RM680_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09165;old_locus_tag=RM680_09170
NZ_JAVRJI010000011.1	Protein Homology	CDS	14976	16049	.	-	0	ID=cds-WP_001832735.1;Parent=gene-RM680_RS09165;Dbxref=GenBank:WP_001832735.1;Name=WP_001832735.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474610.1;locus_tag=RM680_RS09165;product=D-alanine--D-alanine ligase;protein_id=WP_001832735.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	16440	17651	.	+	.	ID=gene-RM680_RS09170;Name=RM680_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09170;old_locus_tag=RM680_09175
NZ_JAVRJI010000011.1	Protein Homology	CDS	16440	17651	.	+	0	ID=cds-WP_001829910.1;Parent=gene-RM680_RS09170;Dbxref=GenBank:WP_001829910.1;Name=WP_001829910.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0071555,GO:0008955,GO:0015648;gbkey=CDS;go_function=peptidoglycan glycosyltransferase activity|0008955||IEA,lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447766.1;locus_tag=RM680_RS09170;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WP_001829910.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	17751	17888	.	-	.	ID=gene-RM680_RS09175;Name=RM680_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09175;old_locus_tag=RM680_09180
NZ_JAVRJI010000011.1	Protein Homology	CDS	17751	17888	.	-	0	ID=cds-WP_001829949.1;Parent=gene-RM680_RS09175;Dbxref=GenBank:WP_001829949.1;Name=WP_001829949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500799.1;locus_tag=RM680_RS09175;product=Lmo0850 family protein;protein_id=WP_001829949.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	18031	18234	.	-	.	ID=gene-RM680_RS09180;Name=csoZ;gbkey=Gene;gene=csoZ;gene_biotype=protein_coding;locus_tag=RM680_RS09180;old_locus_tag=RM680_09185
NZ_JAVRJI010000011.1	Protein Homology	CDS	18031	18234	.	-	0	ID=cds-WP_002494680.1;Parent=gene-RM680_RS09180;Dbxref=GenBank:WP_002494680.1;Name=WP_002494680.1;gbkey=CDS;gene=csoZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474591.1;locus_tag=RM680_RS09180;product=putative copper chaperone CsoZ;protein_id=WP_002494680.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	18247	18540	.	-	.	ID=gene-RM680_RS09185;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=RM680_RS09185;old_locus_tag=RM680_09190
NZ_JAVRJI010000011.1	Protein Homology	CDS	18247	18540	.	-	0	ID=cds-WP_001829893.1;Parent=gene-RM680_RS09185;Dbxref=GenBank:WP_001829893.1;Name=WP_001829893.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458700.1;locus_tag=RM680_RS09185;product=copper-sensing transcriptional repressor CsoR;protein_id=WP_001829893.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	18714	20198	.	+	.	ID=gene-RM680_RS09190;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=RM680_RS09190;old_locus_tag=RM680_09195
NZ_JAVRJI010000011.1	Protein Homology	CDS	18714	20198	.	+	0	ID=cds-WP_001829964.1;Parent=gene-RM680_RS09190;Dbxref=GenBank:WP_001829964.1;Name=WP_001829964.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468314.1;locus_tag=RM680_RS09190;product=cardiolipin synthase;protein_id=WP_001829964.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	20380	21033	.	+	.	ID=gene-RM680_RS09195;Name=RM680_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09195;old_locus_tag=RM680_09200
NZ_JAVRJI010000011.1	Protein Homology	CDS	20380	21033	.	+	0	ID=cds-WP_001829983.1;Parent=gene-RM680_RS09195;Dbxref=GenBank:WP_001829983.1;Name=WP_001829983.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496981.1;locus_tag=RM680_RS09195;product=HD domain-containing protein;protein_id=WP_001829983.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	21139	22011	.	-	.	ID=gene-RM680_RS09200;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=RM680_RS09200;old_locus_tag=RM680_09205
NZ_JAVRJI010000011.1	Protein Homology	CDS	21139	22011	.	-	0	ID=cds-WP_001832740.1;Parent=gene-RM680_RS09200;Dbxref=GenBank:WP_001832740.1;Name=WP_001832740.1;Ontology_term=GO:0051205,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500806.1;locus_tag=RM680_RS09200;product=membrane protein insertase YidC;protein_id=WP_001832740.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	22100	22738	.	-	.	ID=gene-RM680_RS09205;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=RM680_RS09205;old_locus_tag=RM680_09210
NZ_JAVRJI010000011.1	Protein Homology	CDS	22100	22738	.	-	0	ID=cds-WP_002505076.1;Parent=gene-RM680_RS09205;Dbxref=GenBank:WP_002505076.1;Name=WP_002505076.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505076.1;locus_tag=RM680_RS09205;product=thiamine phosphate synthase;protein_id=WP_002505076.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	22744	23532	.	-	.	ID=gene-RM680_RS09210;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=RM680_RS09210;old_locus_tag=RM680_09215
NZ_JAVRJI010000011.1	Protein Homology	CDS	22744	23532	.	-	0	ID=cds-WP_001829971.1;Parent=gene-RM680_RS09210;Dbxref=GenBank:WP_001829971.1;Name=WP_001829971.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501588.1;locus_tag=RM680_RS09210;product=hydroxyethylthiazole kinase;protein_id=WP_001829971.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	23525	24346	.	-	.	ID=gene-RM680_RS09215;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=RM680_RS09215;old_locus_tag=RM680_09220
NZ_JAVRJI010000011.1	Protein Homology	CDS	23525	24346	.	-	0	ID=cds-WP_001832736.1;Parent=gene-RM680_RS09215;Dbxref=GenBank:WP_001832736.1;Name=WP_001832736.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832736.1;locus_tag=RM680_RS09215;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_001832736.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	24339	25028	.	-	.	ID=gene-RM680_RS09220;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=RM680_RS09220;old_locus_tag=RM680_09225
NZ_JAVRJI010000011.1	Protein Homology	CDS	24339	25028	.	-	0	ID=cds-WP_311563565.1;Parent=gene-RM680_RS09220;Dbxref=GenBank:WP_311563565.1;Name=WP_311563565.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477702.1;locus_tag=RM680_RS09220;product=thiaminase II;protein_id=WP_311563565.1;transl_table=11
NZ_JAVRJI010000011.1	cmsearch	riboswitch	25100	25198	.	-	.	ID=id-NZ_JAVRJI010000011.1:25100..25198;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000011.1	RefSeq	gene	25313	25972	.	-	.	ID=gene-RM680_RS09225;Name=RM680_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09225;old_locus_tag=RM680_09230
NZ_JAVRJI010000011.1	Protein Homology	CDS	25313	25972	.	-	0	ID=cds-WP_001829904.1;Parent=gene-RM680_RS09225;Dbxref=GenBank:WP_001829904.1;Name=WP_001829904.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499548.1;locus_tag=RM680_RS09225;product=transglycosylase family protein;protein_id=WP_001829904.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	26360	26755	.	-	.	ID=gene-RM680_RS09230;Name=RM680_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09230;old_locus_tag=RM680_09235
NZ_JAVRJI010000011.1	Protein Homology	CDS	26360	26755	.	-	0	ID=cds-WP_001829977.1;Parent=gene-RM680_RS09230;Dbxref=GenBank:WP_001829977.1;Name=WP_001829977.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457121.1;locus_tag=RM680_RS09230;product=single-stranded DNA-binding protein;protein_id=WP_001829977.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	26946	27386	.	+	.	ID=gene-RM680_RS09235;Name=RM680_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09235;old_locus_tag=RM680_09240
NZ_JAVRJI010000011.1	Protein Homology	CDS	26946	27386	.	+	0	ID=cds-WP_001829935.1;Parent=gene-RM680_RS09235;Dbxref=GenBank:WP_001829935.1;Name=WP_001829935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829935.1;locus_tag=RM680_RS09235;product=YwpF-like family protein;protein_id=WP_001829935.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	27704	28141	.	-	.	ID=gene-RM680_RS09240;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=RM680_RS09240;old_locus_tag=RM680_09245
NZ_JAVRJI010000011.1	Protein Homology	CDS	27704	28141	.	-	0	ID=cds-WP_311563566.1;Parent=gene-RM680_RS09240;Dbxref=GenBank:WP_311563566.1;Name=WP_311563566.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829953.1;locus_tag=RM680_RS09240;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_311563566.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	28175	29440	.	-	.	ID=gene-RM680_RS09245;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=RM680_RS09245;old_locus_tag=RM680_09250
NZ_JAVRJI010000011.1	Protein Homology	CDS	28175	29440	.	-	0	ID=cds-WP_001829978.1;Parent=gene-RM680_RS09245;Dbxref=GenBank:WP_001829978.1;Name=WP_001829978.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829978.1;locus_tag=RM680_RS09245;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_001829978.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	29550	29783	.	-	.	ID=gene-RM680_RS09250;Name=RM680_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09250;old_locus_tag=RM680_09255
NZ_JAVRJI010000011.1	Protein Homology	CDS	29550	29783	.	-	0	ID=cds-WP_002456242.1;Parent=gene-RM680_RS09250;Dbxref=GenBank:WP_002456242.1;Name=WP_002456242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500817.1;locus_tag=RM680_RS09250;product=DUF1146 family protein;protein_id=WP_002456242.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	29932	30336	.	-	.	ID=gene-RM680_RS09255;Name=RM680_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09255;old_locus_tag=RM680_09260
NZ_JAVRJI010000011.1	Protein Homology	CDS	29932	30336	.	-	0	ID=cds-WP_001829924.1;Parent=gene-RM680_RS09255;Dbxref=GenBank:WP_001829924.1;Name=WP_001829924.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500819.1;locus_tag=RM680_RS09255;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001829924.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	30356	31768	.	-	.	ID=gene-RM680_RS09260;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=RM680_RS09260;old_locus_tag=RM680_09265
NZ_JAVRJI010000011.1	Protein Homology	CDS	30356	31768	.	-	0	ID=cds-WP_001829930.1;Parent=gene-RM680_RS09260;Dbxref=GenBank:WP_001829930.1;Name=WP_001829930.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636767.1;locus_tag=RM680_RS09260;product=F0F1 ATP synthase subunit beta;protein_id=WP_001829930.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	31790	32656	.	-	.	ID=gene-RM680_RS09265;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=RM680_RS09265;old_locus_tag=RM680_09270
NZ_JAVRJI010000011.1	Protein Homology	CDS	31790	32656	.	-	0	ID=cds-WP_001829942.1;Parent=gene-RM680_RS09265;Dbxref=GenBank:WP_001829942.1;Name=WP_001829942.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500821.2;locus_tag=RM680_RS09265;product=ATP synthase F1 subunit gamma;protein_id=WP_001829942.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	32741	34252	.	-	.	ID=gene-RM680_RS09270;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=RM680_RS09270;old_locus_tag=RM680_09275
NZ_JAVRJI010000011.1	Protein Homology	CDS	32741	34252	.	-	0	ID=cds-WP_001829913.1;Parent=gene-RM680_RS09270;Dbxref=GenBank:WP_001829913.1;Name=WP_001829913.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829913.1;locus_tag=RM680_RS09270;product=F0F1 ATP synthase subunit alpha;protein_id=WP_001829913.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	34275	34814	.	-	.	ID=gene-RM680_RS09275;Name=RM680_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09275;old_locus_tag=RM680_09280
NZ_JAVRJI010000011.1	Protein Homology	CDS	34275	34814	.	-	0	ID=cds-WP_001829963.1;Parent=gene-RM680_RS09275;Dbxref=GenBank:WP_001829963.1;Name=WP_001829963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495679.1;locus_tag=RM680_RS09275;product=F0F1 ATP synthase subunit delta;protein_id=WP_001829963.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	34814	35329	.	-	.	ID=gene-RM680_RS09280;Name=RM680_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09280;old_locus_tag=RM680_09285
NZ_JAVRJI010000011.1	Protein Homology	CDS	34814	35329	.	-	0	ID=cds-WP_002457122.1;Parent=gene-RM680_RS09280;Dbxref=GenBank:WP_002457122.1;Name=WP_002457122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500824.1;locus_tag=RM680_RS09280;product=F0F1 ATP synthase subunit B;protein_id=WP_002457122.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	35427	35639	.	-	.	ID=gene-RM680_RS09285;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=RM680_RS09285;old_locus_tag=RM680_09290
NZ_JAVRJI010000011.1	Protein Homology	CDS	35427	35639	.	-	0	ID=cds-WP_001048816.1;Parent=gene-RM680_RS09285;Dbxref=GenBank:WP_001048816.1;Name=WP_001048816.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500825.1;locus_tag=RM680_RS09285;product=F0F1 ATP synthase subunit C;protein_id=WP_001048816.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	35682	36410	.	-	.	ID=gene-RM680_RS09290;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=RM680_RS09290;old_locus_tag=RM680_09295
NZ_JAVRJI010000011.1	Protein Homology	CDS	35682	36410	.	-	0	ID=cds-WP_001829936.1;Parent=gene-RM680_RS09290;Dbxref=GenBank:WP_001829936.1;Name=WP_001829936.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500826.1;locus_tag=RM680_RS09290;product=F0F1 ATP synthase subunit A;protein_id=WP_001829936.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	36436	36786	.	-	.	ID=gene-RM680_RS09295;Name=RM680_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09295;old_locus_tag=RM680_09300
NZ_JAVRJI010000011.1	Protein Homology	CDS	36436	36786	.	-	0	ID=cds-WP_002494682.1;Parent=gene-RM680_RS09295;Dbxref=GenBank:WP_002494682.1;Name=WP_002494682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494682.1;locus_tag=RM680_RS09295;product=ATP synthase subunit I;protein_id=WP_002494682.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	36939	38084	.	-	.	ID=gene-RM680_RS09300;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=RM680_RS09300;old_locus_tag=RM680_09305
NZ_JAVRJI010000011.1	Protein Homology	CDS	36939	38084	.	-	0	ID=cds-WP_001829933.1;Parent=gene-RM680_RS09300;Dbxref=GenBank:WP_001829933.1;Name=WP_001829933.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498790.1;locus_tag=RM680_RS09300;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_001829933.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	38109	38738	.	-	.	ID=gene-RM680_RS09305;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=RM680_RS09305;old_locus_tag=RM680_09310
NZ_JAVRJI010000011.1	Protein Homology	CDS	38109	38738	.	-	0	ID=cds-WP_001829916.1;Parent=gene-RM680_RS09305;Dbxref=GenBank:WP_001829916.1;Name=WP_001829916.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636774.1;locus_tag=RM680_RS09305;product=uracil phosphoribosyltransferase;protein_id=WP_001829916.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	38767	40005	.	-	.	ID=gene-RM680_RS09310;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=RM680_RS09310;old_locus_tag=RM680_09315
NZ_JAVRJI010000011.1	Protein Homology	CDS	38767	40005	.	-	0	ID=cds-WP_002468313.1;Parent=gene-RM680_RS09310;Dbxref=GenBank:WP_002468313.1;Name=WP_002468313.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829892.1;locus_tag=RM680_RS09310;product=serine hydroxymethyltransferase;protein_id=WP_002468313.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	40030	40554	.	-	.	ID=gene-RM680_RS09315;Name=RM680_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09315;old_locus_tag=RM680_09320
NZ_JAVRJI010000011.1	Protein Homology	CDS	40030	40554	.	-	0	ID=cds-WP_002484530.1;Parent=gene-RM680_RS09315;Dbxref=GenBank:WP_002484530.1;Name=WP_002484530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500831.1;locus_tag=RM680_RS09315;product=TIGR01440 family protein;protein_id=WP_002484530.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	40664	41083	.	-	.	ID=gene-RM680_RS09320;Name=RM680_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09320;old_locus_tag=RM680_09325
NZ_JAVRJI010000011.1	Protein Homology	CDS	40664	41083	.	-	0	ID=cds-WP_002457126.1;Parent=gene-RM680_RS09320;Dbxref=GenBank:WP_002457126.1;Name=WP_002457126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491177.1;locus_tag=RM680_RS09320;product=low molecular weight protein arginine phosphatase;protein_id=WP_002457126.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	41080	42123	.	-	.	ID=gene-RM680_RS09325;Name=RM680_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09325;old_locus_tag=RM680_09330
NZ_JAVRJI010000011.1	Protein Homology	CDS	41080	42123	.	-	0	ID=cds-WP_001829923.1;Parent=gene-RM680_RS09325;Dbxref=GenBank:WP_001829923.1;Name=WP_001829923.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447794.1;locus_tag=RM680_RS09325;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_001829923.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	42286	43122	.	-	.	ID=gene-RM680_RS09330;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=RM680_RS09330;old_locus_tag=RM680_09335
NZ_JAVRJI010000011.1	Protein Homology	CDS	42286	43122	.	-	0	ID=cds-WP_002440566.1;Parent=gene-RM680_RS09330;Dbxref=GenBank:WP_002440566.1;Name=WP_002440566.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368359.1;locus_tag=RM680_RS09330;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_002440566.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	43109	44185	.	-	.	ID=gene-RM680_RS09335;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=RM680_RS09335;old_locus_tag=RM680_09340
NZ_JAVRJI010000011.1	Protein Homology	CDS	43109	44185	.	-	0	ID=cds-WP_001829940.1;Parent=gene-RM680_RS09335;Dbxref=GenBank:WP_001829940.1;Name=WP_001829940.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=RM680_RS09335;product=peptide chain release factor 1;protein_id=WP_001829940.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	44185	44784	.	-	.	ID=gene-RM680_RS09340;Name=RM680_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09340;old_locus_tag=RM680_09345
NZ_JAVRJI010000011.1	Protein Homology	CDS	44185	44784	.	-	0	ID=cds-WP_001829979.1;Parent=gene-RM680_RS09340;Dbxref=GenBank:WP_001829979.1;Name=WP_001829979.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500836.1;locus_tag=RM680_RS09340;product=thymidine kinase;protein_id=WP_001829979.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	45071	45328	.	-	.	ID=gene-RM680_RS09345;Name=RM680_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09345;old_locus_tag=RM680_09350
NZ_JAVRJI010000011.1	Protein Homology	CDS	45071	45328	.	-	0	ID=cds-WP_001829959.1;Parent=gene-RM680_RS09345;Dbxref=GenBank:WP_001829959.1;Name=WP_001829959.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448672.1;locus_tag=RM680_RS09345;product=type B 50S ribosomal protein L31;protein_id=WP_001829959.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	45445	46761	.	-	.	ID=gene-RM680_RS09350;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=RM680_RS09350;old_locus_tag=RM680_09355
NZ_JAVRJI010000011.1	Protein Homology	CDS	45445	46761	.	-	0	ID=cds-WP_001829985.1;Parent=gene-RM680_RS09350;Dbxref=GenBank:WP_001829985.1;Name=WP_001829985.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500838.1;locus_tag=RM680_RS09350;product=transcription termination factor Rho;protein_id=WP_001829985.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	47065	48492	.	-	.	ID=gene-RM680_RS09355;Name=RM680_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09355;old_locus_tag=RM680_09360
NZ_JAVRJI010000011.1	Protein Homology	CDS	47065	48492	.	-	0	ID=cds-WP_001832742.1;Parent=gene-RM680_RS09355;Dbxref=GenBank:WP_001832742.1;Name=WP_001832742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500839.1;locus_tag=RM680_RS09355;product=aldehyde dehydrogenase family protein;protein_id=WP_001832742.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	48920	50179	.	-	.	ID=gene-RM680_RS09360;Name=RM680_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09360;old_locus_tag=RM680_09365
NZ_JAVRJI010000011.1	Protein Homology	CDS	48920	50179	.	-	0	ID=cds-WP_001829922.1;Parent=gene-RM680_RS09360;Dbxref=GenBank:WP_001829922.1;Name=WP_001829922.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500841.1;locus_tag=RM680_RS09360;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_001829922.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	50540	51400	.	-	.	ID=gene-RM680_RS09365;Name=fdaB;gbkey=Gene;gene=fdaB;gene_biotype=protein_coding;locus_tag=RM680_RS09365;old_locus_tag=RM680_09370
NZ_JAVRJI010000011.1	Protein Homology	CDS	50540	51400	.	-	0	ID=cds-WP_001829938.1;Parent=gene-RM680_RS09365;Dbxref=GenBank:WP_001829938.1;Name=WP_001829938.1;gbkey=CDS;gene=fdaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468309.1;locus_tag=RM680_RS09365;product=class IIb fructose-bisphosphate aldolase FdaB;protein_id=WP_001829938.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	51620	52141	.	+	.	ID=gene-RM680_RS09370;Name=RM680_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09370;old_locus_tag=RM680_09375
NZ_JAVRJI010000011.1	Protein Homology	CDS	51620	52141	.	+	0	ID=cds-WP_001829945.1;Parent=gene-RM680_RS09370;Dbxref=GenBank:WP_001829945.1;Name=WP_001829945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470169.1;locus_tag=RM680_RS09370;product=DUF2529 domain-containing protein;protein_id=WP_001829945.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	52368	53975	.	-	.	ID=gene-RM680_RS09375;Name=RM680_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09375;old_locus_tag=RM680_09380
NZ_JAVRJI010000011.1	Protein Homology	CDS	52368	53975	.	-	0	ID=cds-WP_001829895.1;Parent=gene-RM680_RS09375;Dbxref=GenBank:WP_001829895.1;Name=WP_001829895.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275219.1;locus_tag=RM680_RS09375;product=CTP synthase;protein_id=WP_001829895.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	54312	54848	.	-	.	ID=gene-RM680_RS09380;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=RM680_RS09380;old_locus_tag=RM680_09385
NZ_JAVRJI010000011.1	Protein Homology	CDS	54312	54848	.	-	0	ID=cds-WP_311563567.1;Parent=gene-RM680_RS09380;Dbxref=GenBank:WP_311563567.1;Name=WP_311563567.1;Ontology_term=GO:0006351,GO:0006355,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500845.1;locus_tag=RM680_RS09380;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_311563567.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	54959	55819	.	-	.	ID=gene-RM680_RS09385;Name=RM680_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09385;old_locus_tag=RM680_09390
NZ_JAVRJI010000011.1	Protein Homology	CDS	54959	55819	.	-	0	ID=cds-WP_001829899.1;Parent=gene-RM680_RS09385;Dbxref=GenBank:WP_001829899.1;Name=WP_001829899.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113817.1;locus_tag=RM680_RS09385;product=GNAT family N-acetyltransferase;protein_id=WP_001829899.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	56122	56919	.	+	.	ID=gene-RM680_RS09390;Name=coaW;gbkey=Gene;gene=coaW;gene_biotype=protein_coding;locus_tag=RM680_RS09390;old_locus_tag=RM680_09395
NZ_JAVRJI010000011.1	Protein Homology	CDS	56122	56919	.	+	0	ID=cds-WP_001829975.1;Parent=gene-RM680_RS09390;Dbxref=GenBank:WP_001829975.1;Name=WP_001829975.1;Ontology_term=GO:0015937,GO:0004594,GO:0005524;gbkey=CDS;gene=coaW;go_function=pantothenate kinase activity|0004594||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368283.1;locus_tag=RM680_RS09390;product=type II pantothenate kinase;protein_id=WP_001829975.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	57140	57805	.	-	.	ID=gene-RM680_RS09395;Name=RM680_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09395;old_locus_tag=RM680_09400
NZ_JAVRJI010000011.1	Protein Homology	CDS	57140	57805	.	-	0	ID=cds-WP_001829955.1;Parent=gene-RM680_RS09395;Dbxref=GenBank:WP_001829955.1;Name=WP_001829955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447806.1;locus_tag=RM680_RS09395;product=DUF2750 domain-containing protein;protein_id=WP_001829955.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	57979	59169	.	-	.	ID=gene-RM680_RS09400;Name=ldmS;gbkey=Gene;gene=ldmS;gene_biotype=protein_coding;locus_tag=RM680_RS09400;old_locus_tag=RM680_09405
NZ_JAVRJI010000011.1	Protein Homology	CDS	57979	59169	.	-	0	ID=cds-WP_002495295.1;Parent=gene-RM680_RS09400;Dbxref=GenBank:WP_002495295.1;Name=WP_002495295.1;Ontology_term=GO:0006555,GO:1901605,GO:0016881,GO:0034026;gbkey=CDS;gene=ldmS;go_function=acid-amino acid ligase activity|0016881||IEA,L-amino-acid alpha-ligase activity|0034026||IEA;go_process=methionine metabolic process|0006555||IEA,alpha-amino acid metabolic process|1901605||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464715.1;locus_tag=RM680_RS09400;product=L-aspartate--L-methionine ligase LdmS;protein_id=WP_002495295.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	59169	60353	.	-	.	ID=gene-RM680_RS09405;Name=RM680_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09405;old_locus_tag=RM680_09410
NZ_JAVRJI010000011.1	Protein Homology	CDS	59169	60353	.	-	0	ID=cds-WP_002440552.1;Parent=gene-RM680_RS09405;Dbxref=GenBank:WP_002440552.1;Name=WP_002440552.1;Ontology_term=GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500851.1;locus_tag=RM680_RS09405;product=M20 family metallopeptidase;protein_id=WP_002440552.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	60581	61051	.	+	.	ID=gene-RM680_RS09410;Name=RM680_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09410;old_locus_tag=RM680_09415
NZ_JAVRJI010000011.1	Protein Homology	CDS	60581	61051	.	+	0	ID=cds-WP_001829929.1;Parent=gene-RM680_RS09410;Dbxref=GenBank:WP_001829929.1;Name=WP_001829929.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500852.1;locus_tag=RM680_RS09410;product=S-ribosylhomocysteine lyase;protein_id=WP_001829929.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	61202	61552	.	-	.	ID=gene-RM680_RS09415;Name=RM680_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09415;old_locus_tag=RM680_09420
NZ_JAVRJI010000011.1	Protein Homology	CDS	61202	61552	.	-	0	ID=cds-WP_002484529.1;Parent=gene-RM680_RS09415;Dbxref=GenBank:WP_002484529.1;Name=WP_002484529.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498854.1;locus_tag=RM680_RS09415;product=DoxX family protein;protein_id=WP_002484529.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	61549	62739	.	-	.	ID=gene-RM680_RS09420;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=RM680_RS09420;old_locus_tag=RM680_09425
NZ_JAVRJI010000011.1	Protein Homology	CDS	61549	62739	.	-	0	ID=cds-WP_002495578.1;Parent=gene-RM680_RS09420;Dbxref=GenBank:WP_002495578.1;Name=WP_002495578.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834658.1;locus_tag=RM680_RS09420;product=phosphopentomutase;protein_id=WP_002495578.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	62752	64053	.	-	.	ID=gene-RM680_RS09425;Name=RM680_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09425;old_locus_tag=RM680_09430
NZ_JAVRJI010000011.1	Protein Homology	CDS	62752	64053	.	-	0	ID=cds-WP_002440546.1;Parent=gene-RM680_RS09425;Dbxref=GenBank:WP_002440546.1;Name=WP_002440546.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500854.1;locus_tag=RM680_RS09425;product=pyrimidine-nucleoside phosphorylase;protein_id=WP_002440546.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	64086	64748	.	-	.	ID=gene-RM680_RS09430;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=RM680_RS09430;old_locus_tag=RM680_09435
NZ_JAVRJI010000011.1	Protein Homology	CDS	64086	64748	.	-	0	ID=cds-WP_002495579.1;Parent=gene-RM680_RS09430;Dbxref=GenBank:WP_002495579.1;Name=WP_002495579.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500856.1;locus_tag=RM680_RS09430;product=deoxyribose-phosphate aldolase;protein_id=WP_002495579.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	64955	65665	.	+	.	ID=gene-RM680_RS09435;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=RM680_RS09435;old_locus_tag=RM680_09440
NZ_JAVRJI010000011.1	Protein Homology	CDS	64955	65665	.	+	0	ID=cds-WP_002440540.1;Parent=gene-RM680_RS09435;Dbxref=GenBank:WP_002440540.1;Name=WP_002440540.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=RM680_RS09435;product=purine-nucleoside phosphorylase;protein_id=WP_002440540.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	65789	66235	.	-	.	ID=gene-RM680_RS09440;Name=RM680_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09440;old_locus_tag=RM680_09445
NZ_JAVRJI010000011.1	Protein Homology	CDS	65789	66235	.	-	0	ID=cds-WP_002484525.1;Parent=gene-RM680_RS09440;Dbxref=GenBank:WP_002484525.1;Name=WP_002484525.1;Ontology_term=GO:0008199,GO:0016722;gbkey=CDS;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829900.1;locus_tag=RM680_RS09440;product=Dps family protein;protein_id=WP_002484525.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	66423	66833	.	-	.	ID=gene-RM680_RS09445;Name=RM680_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09445;old_locus_tag=RM680_09450
NZ_JAVRJI010000011.1	Protein Homology	CDS	66423	66833	.	-	0	ID=cds-WP_001829885.1;Parent=gene-RM680_RS09445;Dbxref=GenBank:WP_001829885.1;Name=WP_001829885.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834660.1;locus_tag=RM680_RS09445;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_001829885.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	67014	68390	.	-	.	ID=gene-RM680_RS09450;Name=RM680_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09450;old_locus_tag=RM680_09455
NZ_JAVRJI010000011.1	Protein Homology	CDS	67014	68390	.	-	0	ID=cds-WP_001829918.1;Parent=gene-RM680_RS09450;Dbxref=GenBank:WP_001829918.1;Name=WP_001829918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500860.1;locus_tag=RM680_RS09450;product=EVE domain-containing protein;protein_id=WP_001829918.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	68623	68850	.	-	.	ID=gene-RM680_RS09455;Name=RM680_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09455;old_locus_tag=RM680_09460
NZ_JAVRJI010000011.1	Protein Homology	CDS	68623	68850	.	-	0	ID=cds-WP_001829956.1;Parent=gene-RM680_RS09455;Dbxref=GenBank:WP_001829956.1;Name=WP_001829956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829956.1;locus_tag=RM680_RS09455;product=hypothetical protein;protein_id=WP_001829956.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	68905	69843	.	-	.	ID=gene-RM680_RS09460;Name=RM680_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09460;old_locus_tag=RM680_09465
NZ_JAVRJI010000011.1	Protein Homology	CDS	68905	69843	.	-	0	ID=cds-WP_001829908.1;Parent=gene-RM680_RS09460;Dbxref=GenBank:WP_001829908.1;Name=WP_001829908.1;Ontology_term=GO:0004476,GO:0008270;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489598.1;locus_tag=RM680_RS09460;product=type I phosphomannose isomerase catalytic subunit;protein_id=WP_001829908.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	70485	71141	.	-	.	ID=gene-RM680_RS09465;Name=RM680_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09465;old_locus_tag=RM680_09470
NZ_JAVRJI010000011.1	Protein Homology	CDS	70485	71141	.	-	0	ID=cds-WP_001829986.1;Parent=gene-RM680_RS09465;Dbxref=GenBank:WP_001829986.1;Name=WP_001829986.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503664.1;locus_tag=RM680_RS09465;product=NAD(P)-binding oxidoreductase;protein_id=WP_001829986.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	71286	71627	.	+	.	ID=gene-RM680_RS09470;Name=czrA;gbkey=Gene;gene=czrA;gene_biotype=protein_coding;locus_tag=RM680_RS09470;old_locus_tag=RM680_09475
NZ_JAVRJI010000011.1	Protein Homology	CDS	71286	71627	.	+	0	ID=cds-WP_001829898.1;Parent=gene-RM680_RS09470;Dbxref=GenBank:WP_001829898.1;Name=WP_001829898.1;gbkey=CDS;gene=czrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499956.1;locus_tag=RM680_RS09470;product=Zn(II)-responsive metalloregulatory transcriptional repressor CzrA;protein_id=WP_001829898.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	71614	72567	.	+	.	ID=gene-RM680_RS09475;Name=czrB;gbkey=Gene;gene=czrB;gene_biotype=protein_coding;locus_tag=RM680_RS09475;old_locus_tag=RM680_09480
NZ_JAVRJI010000011.1	Protein Homology	CDS	71614	72567	.	+	0	ID=cds-WP_001829912.1;Parent=gene-RM680_RS09475;Dbxref=GenBank:WP_001829912.1;Name=WP_001829912.1;gbkey=CDS;gene=czrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464718.1;locus_tag=RM680_RS09475;product=CDF family zinc efflux transporter CzrB;protein_id=WP_001829912.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	72828	73559	.	-	.	ID=gene-RM680_RS09480;Name=RM680_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09480;old_locus_tag=RM680_09485
NZ_JAVRJI010000011.1	Protein Homology	CDS	72828	73559	.	-	0	ID=cds-WP_001829921.1;Parent=gene-RM680_RS09480;Dbxref=GenBank:WP_001829921.1;Name=WP_001829921.1;Ontology_term=GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502702.1;locus_tag=RM680_RS09480;product=metallophosphoesterase family protein;protein_id=WP_001829921.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	73692	74843	.	+	.	ID=gene-RM680_RS09485;Name=RM680_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09485;old_locus_tag=RM680_09490
NZ_JAVRJI010000011.1	Protein Homology	CDS	73692	74843	.	+	0	ID=cds-WP_311563568.1;Parent=gene-RM680_RS09485;Dbxref=GenBank:WP_311563568.1;Name=WP_311563568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494238.1;locus_tag=RM680_RS09485;product=YtxH domain-containing protein;protein_id=WP_311563568.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	75148	76005	.	-	.	ID=gene-RM680_RS09490;Name=RM680_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09490;old_locus_tag=RM680_09495
NZ_JAVRJI010000011.1	Protein Homology	CDS	75148	76005	.	-	0	ID=cds-WP_001829896.1;Parent=gene-RM680_RS09490;Dbxref=GenBank:WP_001829896.1;Name=WP_001829896.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829896.1;locus_tag=RM680_RS09490;product=HAD family hydrolase;protein_id=WP_001829896.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	76500	78305	.	-	.	ID=gene-RM680_RS09495;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=RM680_RS09495;old_locus_tag=RM680_09500
NZ_JAVRJI010000011.1	Protein Homology	CDS	76500	78305	.	-	0	ID=cds-WP_001829889.1;Parent=gene-RM680_RS09495;Dbxref=GenBank:WP_001829889.1;Name=WP_001829889.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500875.1;locus_tag=RM680_RS09495;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_001829889.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	78936	80291	.	-	.	ID=gene-RM680_RS09500;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=RM680_RS09500;old_locus_tag=RM680_09505
NZ_JAVRJI010000011.1	Protein Homology	CDS	78936	80291	.	-	0	ID=cds-WP_002457133.1;Parent=gene-RM680_RS09500;Dbxref=GenBank:WP_002457133.1;Name=WP_002457133.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500881.1;locus_tag=RM680_RS09500;product=phosphoglucosamine mutase;protein_id=WP_002457133.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	80316	81251	.	-	.	ID=gene-RM680_RS09505;Name=RM680_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09505;old_locus_tag=RM680_09510
NZ_JAVRJI010000011.1	Protein Homology	CDS	80316	81251	.	-	0	ID=cds-WP_001829925.1;Parent=gene-RM680_RS09505;Dbxref=GenBank:WP_001829925.1;Name=WP_001829925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447826.1;locus_tag=RM680_RS09505;product=CdaR family protein;protein_id=WP_001829925.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	81252	82061	.	-	.	ID=gene-RM680_RS09510;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=RM680_RS09510;old_locus_tag=RM680_09515
NZ_JAVRJI010000011.1	Protein Homology	CDS	81252	82061	.	-	0	ID=cds-WP_001829928.1;Parent=gene-RM680_RS09510;Dbxref=GenBank:WP_001829928.1;Name=WP_001829928.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475624.1;locus_tag=RM680_RS09510;product=diadenylate cyclase CdaA;protein_id=WP_001829928.1;transl_table=11
NZ_JAVRJI010000011.1	RefSeq	gene	82228	82300	.	-	.	ID=gene-RM680_RS09515;Name=RM680_RS09515;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS09515;old_locus_tag=RM680_09520
NZ_JAVRJI010000011.1	tRNAscan-SE	tRNA	82228	82300	.	-	.	ID=rna-RM680_RS09515;Parent=gene-RM680_RS09515;anticodon=(pos:complement(82265..82267));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS09515;product=tRNA-Lys
NZ_JAVRJI010000011.1	tRNAscan-SE	exon	82228	82300	.	-	.	ID=exon-RM680_RS09515-1;Parent=rna-RM680_RS09515;anticodon=(pos:complement(82265..82267));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS09515;product=tRNA-Lys
NZ_JAVRJI010000011.1	RefSeq	gene	82304	82378	.	-	.	ID=gene-RM680_RS09520;Name=RM680_RS09520;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS09520;old_locus_tag=RM680_09525
NZ_JAVRJI010000011.1	tRNAscan-SE	tRNA	82304	82378	.	-	.	ID=rna-RM680_RS09520;Parent=gene-RM680_RS09520;anticodon=(pos:complement(82344..82346));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS09520;product=tRNA-Gln
NZ_JAVRJI010000011.1	tRNAscan-SE	exon	82304	82378	.	-	.	ID=exon-RM680_RS09520-1;Parent=rna-RM680_RS09520;anticodon=(pos:complement(82344..82346));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS09520;product=tRNA-Gln
##sequence-region NZ_JAVRJI010000012.1 1 78202
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000012.1	RefSeq	region	1	78202	.	+	.	ID=NZ_JAVRJI010000012.1:1..78202;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000012.1	RefSeq	gene	236	622	.	-	.	ID=gene-RM680_RS09525;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=RM680_RS09525;old_locus_tag=RM680_09530
NZ_JAVRJI010000012.1	Protein Homology	CDS	236	622	.	-	0	ID=cds-WP_001830619.1;Parent=gene-RM680_RS09525;Dbxref=GenBank:WP_001830619.1;Name=WP_001830619.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475660.1;locus_tag=RM680_RS09525;product=aspartate 1-decarboxylase;protein_id=WP_001830619.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	615	1475	.	-	.	ID=gene-RM680_RS09530;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=RM680_RS09530;old_locus_tag=RM680_09535
NZ_JAVRJI010000012.1	Protein Homology	CDS	615	1475	.	-	0	ID=cds-WP_001830610.1;Parent=gene-RM680_RS09530;Dbxref=GenBank:WP_001830610.1;Name=WP_001830610.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465203.1;locus_tag=RM680_RS09530;product=pantoate--beta-alanine ligase;protein_id=WP_001830610.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	1468	2286	.	-	.	ID=gene-RM680_RS09535;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=RM680_RS09535;old_locus_tag=RM680_09540
NZ_JAVRJI010000012.1	Protein Homology	CDS	1468	2286	.	-	0	ID=cds-WP_001830671.1;Parent=gene-RM680_RS09535;Dbxref=GenBank:WP_001830671.1;Name=WP_001830671.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454078.1;locus_tag=RM680_RS09535;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_001830671.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	2362	3231	.	+	.	ID=gene-RM680_RS09540;Name=RM680_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09540;old_locus_tag=RM680_09545
NZ_JAVRJI010000012.1	Protein Homology	CDS	2362	3231	.	+	0	ID=cds-WP_001830628.1;Parent=gene-RM680_RS09540;Dbxref=GenBank:WP_001830628.1;Name=WP_001830628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458256.1;locus_tag=RM680_RS09540;product=oxidoreductase;protein_id=WP_001830628.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	3630	4334	.	-	.	ID=gene-RM680_RS09545;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=RM680_RS09545;old_locus_tag=RM680_09550
NZ_JAVRJI010000012.1	Protein Homology	CDS	3630	4334	.	-	0	ID=cds-WP_001830626.1;Parent=gene-RM680_RS09545;Dbxref=GenBank:WP_001830626.1;Name=WP_001830626.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500935.1;locus_tag=RM680_RS09545;product=acetolactate decarboxylase;protein_id=WP_001830626.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	4446	6110	.	-	.	ID=gene-RM680_RS09550;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=RM680_RS09550;old_locus_tag=RM680_09555
NZ_JAVRJI010000012.1	Protein Homology	CDS	4446	6110	.	-	0	ID=cds-WP_001830666.1;Parent=gene-RM680_RS09550;Dbxref=GenBank:WP_001830666.1;Name=WP_001830666.1;Ontology_term=GO:0034077,GO:0000287,GO:0003984,GO:0030976;gbkey=CDS;gene=alsS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=butanediol metabolic process|0034077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500936.1;locus_tag=RM680_RS09550;product=acetolactate synthase AlsS;protein_id=WP_001830666.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	6173	7123	.	-	.	ID=gene-RM680_RS09555;Name=RM680_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09555;old_locus_tag=RM680_09560
NZ_JAVRJI010000012.1	Protein Homology	CDS	6173	7123	.	-	0	ID=cds-WP_001830650.1;Parent=gene-RM680_RS09555;Dbxref=GenBank:WP_001830650.1;Name=WP_001830650.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase (NAD+) activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503222.1;locus_tag=RM680_RS09555;product=L-lactate dehydrogenase;protein_id=WP_001830650.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	7957	8838	.	-	.	ID=gene-RM680_RS09560;Name=cidR;gbkey=Gene;gene=cidR;gene_biotype=protein_coding;locus_tag=RM680_RS09560;old_locus_tag=RM680_09565
NZ_JAVRJI010000012.1	Protein Homology	CDS	7957	8838	.	-	0	ID=cds-WP_001830605.1;Parent=gene-RM680_RS09560;Dbxref=GenBank:WP_001830605.1;Name=WP_001830605.1;gbkey=CDS;gene=cidR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447052.1;locus_tag=RM680_RS09560;product=cidABC operon transcriptional activator CidR;protein_id=WP_001830605.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	9382	10833	.	+	.	ID=gene-RM680_RS09565;Name=RM680_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09565;old_locus_tag=RM680_09570
NZ_JAVRJI010000012.1	Protein Homology	CDS	9382	10833	.	+	0	ID=cds-WP_002486285.1;Parent=gene-RM680_RS09565;Dbxref=GenBank:WP_002486285.1;Name=WP_002486285.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830629.1;locus_tag=RM680_RS09565;product=APC family permease;protein_id=WP_002486285.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	10961	12298	.	-	.	ID=gene-RM680_RS09570;Name=RM680_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09570;old_locus_tag=RM680_09575
NZ_JAVRJI010000012.1	Protein Homology	CDS	10961	12298	.	-	0	ID=cds-WP_001830675.1;Parent=gene-RM680_RS09570;Dbxref=GenBank:WP_001830675.1;Name=WP_001830675.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501377.1;locus_tag=RM680_RS09570;product=aspartate aminotransferase family protein;protein_id=WP_001830675.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	12564	12995	.	+	.	ID=gene-RM680_RS09575;Name=RM680_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09575;old_locus_tag=RM680_09580
NZ_JAVRJI010000012.1	Protein Homology	CDS	12564	12995	.	+	0	ID=cds-WP_001830680.1;Parent=gene-RM680_RS09575;Dbxref=GenBank:WP_001830680.1;Name=WP_001830680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504286.1;locus_tag=RM680_RS09575;product=hypothetical protein;protein_id=WP_001830680.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	13099	13977	.	-	.	ID=gene-RM680_RS09580;Name=RM680_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09580;old_locus_tag=RM680_09585
NZ_JAVRJI010000012.1	Protein Homology	CDS	13099	13977	.	-	0	ID=cds-WP_311563569.1;Parent=gene-RM680_RS09580;Dbxref=GenBank:WP_311563569.1;Name=WP_311563569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360614.1;locus_tag=RM680_RS09580;product=hypothetical protein;protein_id=WP_311563569.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	14300	14890	.	+	.	ID=gene-RM680_RS09585;Name=RM680_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09585;old_locus_tag=RM680_09590
NZ_JAVRJI010000012.1	Protein Homology	CDS	14300	14890	.	+	0	ID=cds-WP_001830659.1;Parent=gene-RM680_RS09585;Dbxref=GenBank:WP_001830659.1;Name=WP_001830659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456341.1;locus_tag=RM680_RS09585;product=hypothetical protein;protein_id=WP_001830659.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	pseudogene	14894	15073	.	-	.	ID=gene-RM680_RS09590;Name=RM680_RS09590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS09590;old_locus_tag=RM680_09595;partial=true;pseudo=true;start_range=.,14894
NZ_JAVRJI010000012.1	Protein Homology	CDS	14894	15073	.	-	0	ID=cds-RM680_RS09590;Parent=gene-RM680_RS09590;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494449.1;locus_tag=RM680_RS09590;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,14894;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	15683	17044	.	+	.	ID=gene-RM680_RS09595;Name=RM680_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09595;old_locus_tag=RM680_09600
NZ_JAVRJI010000012.1	Protein Homology	CDS	15683	17044	.	+	0	ID=cds-WP_002486284.1;Parent=gene-RM680_RS09595;Dbxref=GenBank:WP_002486284.1;Name=WP_002486284.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495974.1;locus_tag=RM680_RS09595;product=FAD-dependent oxidoreductase;protein_id=WP_002486284.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	17349	18239	.	+	.	ID=gene-RM680_RS09600;Name=RM680_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09600;old_locus_tag=RM680_09605
NZ_JAVRJI010000012.1	Protein Homology	CDS	17349	18239	.	+	0	ID=cds-WP_001830665.1;Parent=gene-RM680_RS09600;Dbxref=GenBank:WP_001830665.1;Name=WP_001830665.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478556.1;locus_tag=RM680_RS09600;product=fructose bisphosphate aldolase;protein_id=WP_001830665.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	18372	19295	.	-	.	ID=gene-RM680_RS09605;Name=RM680_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09605;old_locus_tag=RM680_09610
NZ_JAVRJI010000012.1	Protein Homology	CDS	18372	19295	.	-	0	ID=cds-WP_311563571.1;Parent=gene-RM680_RS09605;Dbxref=GenBank:WP_311563571.1;Name=WP_311563571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012093258.1;locus_tag=RM680_RS09605;product=hypothetical protein;protein_id=WP_311563571.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	19690	21189	.	-	.	ID=gene-RM680_RS09610;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=RM680_RS09610;old_locus_tag=RM680_09615
NZ_JAVRJI010000012.1	Protein Homology	CDS	19690	21189	.	-	0	ID=cds-WP_002477163.1;Parent=gene-RM680_RS09610;Dbxref=GenBank:WP_002477163.1;Name=WP_002477163.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113823.1;locus_tag=RM680_RS09610;product=L-lactate dehydrogenase (quinone);protein_id=WP_002477163.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	21398	22216	.	-	.	ID=gene-RM680_RS09615;Name=RM680_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09615;old_locus_tag=RM680_09620
NZ_JAVRJI010000012.1	Protein Homology	CDS	21398	22216	.	-	0	ID=cds-WP_001830630.1;Parent=gene-RM680_RS09615;Dbxref=GenBank:WP_001830630.1;Name=WP_001830630.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447042.1;locus_tag=RM680_RS09615;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_001830630.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	22218	24845	.	-	.	ID=gene-RM680_RS09620;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=RM680_RS09620;old_locus_tag=RM680_09625
NZ_JAVRJI010000012.1	Protein Homology	CDS	22218	24845	.	-	0	ID=cds-WP_010959298.1;Parent=gene-RM680_RS09620;Dbxref=GenBank:WP_010959298.1;Name=WP_010959298.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468754.1;locus_tag=RM680_RS09620;product=pyruvate%2C phosphate dikinase;protein_id=WP_010959298.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	25194	26789	.	-	.	ID=gene-RM680_RS09625;Name=mbcS;gbkey=Gene;gene=mbcS;gene_biotype=protein_coding;locus_tag=RM680_RS09625;old_locus_tag=RM680_09630
NZ_JAVRJI010000012.1	Protein Homology	CDS	25194	26789	.	-	0	ID=cds-WP_002474204.1;Parent=gene-RM680_RS09625;Dbxref=GenBank:WP_002474204.1;Name=WP_002474204.1;gbkey=CDS;gene=mbcS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505544.1;locus_tag=RM680_RS09625;product=acyl-CoA synthetase MbcS;protein_id=WP_002474204.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	27129	27575	.	-	.	ID=gene-RM680_RS09630;Name=RM680_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09630;old_locus_tag=RM680_09635
NZ_JAVRJI010000012.1	Protein Homology	CDS	27129	27575	.	-	0	ID=cds-WP_002477165.1;Parent=gene-RM680_RS09630;Dbxref=GenBank:WP_002477165.1;Name=WP_002477165.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490853.1;locus_tag=RM680_RS09630;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_002477165.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	27603	27821	.	-	.	ID=gene-RM680_RS09635;Name=RM680_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09635;old_locus_tag=RM680_09640
NZ_JAVRJI010000012.1	Protein Homology	CDS	27603	27821	.	-	0	ID=cds-WP_002458270.1;Parent=gene-RM680_RS09635;Dbxref=GenBank:WP_002458270.1;Name=WP_002458270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830634.1;locus_tag=RM680_RS09635;product=sterile alpha motif-like domain-containing protein;protein_id=WP_002458270.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	28268	29443	.	-	.	ID=gene-RM680_RS09640;Name=RM680_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09640;old_locus_tag=RM680_09645
NZ_JAVRJI010000012.1	Protein Homology	CDS	28268	29443	.	-	0	ID=cds-WP_001830632.1;Parent=gene-RM680_RS09640;Dbxref=GenBank:WP_001830632.1;Name=WP_001830632.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470277.1;locus_tag=RM680_RS09640;product=amidohydrolase;protein_id=WP_001830632.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	29765	31483	.	-	.	ID=gene-RM680_RS09645;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=RM680_RS09645;old_locus_tag=RM680_09650
NZ_JAVRJI010000012.1	Protein Homology	CDS	29765	31483	.	-	0	ID=cds-WP_010959300.1;Parent=gene-RM680_RS09645;Dbxref=GenBank:WP_010959300.1;Name=WP_010959300.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465189.1;locus_tag=RM680_RS09645;product=choline dehydrogenase;protein_id=WP_010959300.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	31643	33133	.	-	.	ID=gene-RM680_RS09650;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=RM680_RS09650;old_locus_tag=RM680_09655
NZ_JAVRJI010000012.1	Protein Homology	CDS	31643	33133	.	-	0	ID=cds-WP_001830602.1;Parent=gene-RM680_RS09650;Dbxref=GenBank:WP_001830602.1;Name=WP_001830602.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501386.1;locus_tag=RM680_RS09650;product=betaine-aldehyde dehydrogenase;protein_id=WP_001830602.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	33605	34168	.	+	.	ID=gene-RM680_RS09655;Name=cudC;gbkey=Gene;gene=cudC;gene_biotype=protein_coding;gene_synonym=betI;locus_tag=RM680_RS09655;old_locus_tag=RM680_09660
NZ_JAVRJI010000012.1	Protein Homology	CDS	33605	34168	.	+	0	ID=cds-WP_001830608.1;Parent=gene-RM680_RS09655;Dbxref=GenBank:WP_001830608.1;Name=WP_001830608.1;gbkey=CDS;gene=cudC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830608.1;locus_tag=RM680_RS09655;product=choline uptake/conversion transcriptional regulator CudC;protein_id=WP_001830608.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	34215	35837	.	-	.	ID=gene-RM680_RS09660;Name=RM680_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09660;old_locus_tag=RM680_09665
NZ_JAVRJI010000012.1	Protein Homology	CDS	34215	35837	.	-	0	ID=cds-WP_001830660.1;Parent=gene-RM680_RS09660;Dbxref=GenBank:WP_001830660.1;Name=WP_001830660.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501390.2;locus_tag=RM680_RS09660;product=BCCT family transporter;protein_id=WP_001830660.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	36258	37556	.	-	.	ID=gene-RM680_RS09665;Name=RM680_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09665;old_locus_tag=RM680_09670
NZ_JAVRJI010000012.1	Protein Homology	CDS	36258	37556	.	-	0	ID=cds-WP_001830664.1;Parent=gene-RM680_RS09665;Dbxref=GenBank:WP_001830664.1;Name=WP_001830664.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830664.1;locus_tag=RM680_RS09665;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_001830664.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	37920	38456	.	-	.	ID=gene-RM680_RS09670;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=RM680_RS09670;old_locus_tag=RM680_09675
NZ_JAVRJI010000012.1	Protein Homology	CDS	37920	38456	.	-	0	ID=cds-WP_002438021.1;Parent=gene-RM680_RS09670;Dbxref=GenBank:WP_002438021.1;Name=WP_002438021.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447033.1;locus_tag=RM680_RS09670;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_002438021.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	38453	40303	.	-	.	ID=gene-RM680_RS09675;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=RM680_RS09675;old_locus_tag=RM680_09680
NZ_JAVRJI010000012.1	Protein Homology	CDS	38453	40303	.	-	0	ID=cds-WP_002438017.1;Parent=gene-RM680_RS09675;Dbxref=GenBank:WP_002438017.1;Name=WP_002438017.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361474.1;locus_tag=RM680_RS09675;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_002438017.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	40622	40927	.	-	.	ID=gene-RM680_RS09680;Name=RM680_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09680;old_locus_tag=RM680_09685
NZ_JAVRJI010000012.1	Protein Homology	CDS	40622	40927	.	-	0	ID=cds-WP_002438015.1;Parent=gene-RM680_RS09680;Dbxref=GenBank:WP_002438015.1;Name=WP_002438015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438015.1;locus_tag=RM680_RS09680;product=hypothetical protein;protein_id=WP_002438015.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	41251	41850	.	-	.	ID=gene-RM680_RS09685;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=RM680_RS09685;old_locus_tag=RM680_09690
NZ_JAVRJI010000012.1	Protein Homology	CDS	41251	41850	.	-	0	ID=cds-WP_002438013.1;Parent=gene-RM680_RS09685;Dbxref=GenBank:WP_002438013.1;Name=WP_002438013.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438013.1;locus_tag=RM680_RS09685;product=adenylyl-sulfate kinase;protein_id=WP_002438013.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	41866	43044	.	-	.	ID=gene-RM680_RS09690;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=RM680_RS09690;old_locus_tag=RM680_09695
NZ_JAVRJI010000012.1	Protein Homology	CDS	41866	43044	.	-	0	ID=cds-WP_010959302.1;Parent=gene-RM680_RS09690;Dbxref=GenBank:WP_010959302.1;Name=WP_010959302.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=sat;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438012.1;locus_tag=RM680_RS09690;product=sulfate adenylyltransferase;protein_id=WP_010959302.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	43068	43967	.	-	.	ID=gene-RM680_RS09695;Name=RM680_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09695;old_locus_tag=RM680_09700
NZ_JAVRJI010000012.1	Protein Homology	CDS	43068	43967	.	-	0	ID=cds-WP_010959303.1;Parent=gene-RM680_RS09695;Dbxref=GenBank:WP_010959303.1;Name=WP_010959303.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497767.1;locus_tag=RM680_RS09695;product=sulfite exporter TauE/SafE family protein;protein_id=WP_010959303.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	43989	44600	.	-	.	ID=gene-RM680_RS09700;Name=RM680_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09700;old_locus_tag=RM680_09705
NZ_JAVRJI010000012.1	Protein Homology	CDS	43989	44600	.	-	0	ID=cds-WP_002493802.1;Parent=gene-RM680_RS09700;Dbxref=GenBank:WP_002493802.1;Name=WP_002493802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447029.1;locus_tag=RM680_RS09700;product=NAD(P)-binding protein;protein_id=WP_002493802.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	44675	45454	.	-	.	ID=gene-RM680_RS09705;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=RM680_RS09705;old_locus_tag=RM680_09710
NZ_JAVRJI010000012.1	Protein Homology	CDS	44675	45454	.	-	0	ID=cds-WP_010959304.1;Parent=gene-RM680_RS09705;Dbxref=GenBank:WP_010959304.1;Name=WP_010959304.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959304.1;locus_tag=RM680_RS09705;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_010959304.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	45476	47194	.	-	.	ID=gene-RM680_RS09710;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=RM680_RS09710;old_locus_tag=RM680_09715
NZ_JAVRJI010000012.1	Protein Homology	CDS	45476	47194	.	-	0	ID=cds-WP_002468762.1;Parent=gene-RM680_RS09710;Dbxref=GenBank:WP_002468762.1;Name=WP_002468762.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493241.1;locus_tag=RM680_RS09710;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_002468762.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	47214	49058	.	-	.	ID=gene-RM680_RS09715;Name=RM680_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09715;old_locus_tag=RM680_09720
NZ_JAVRJI010000012.1	Protein Homology	CDS	47214	49058	.	-	0	ID=cds-WP_010959305.1;Parent=gene-RM680_RS09715;Dbxref=GenBank:WP_010959305.1;Name=WP_010959305.1;Ontology_term=GO:0006790,GO:0019344,GO:0004783,GO:0010181,GO:0050660,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfur compound metabolic process|0006790||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490455.1;locus_tag=RM680_RS09715;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WP_010959305.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	49356	50087	.	-	.	ID=gene-RM680_RS09720;Name=RM680_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09720;old_locus_tag=RM680_09725
NZ_JAVRJI010000012.1	Protein Homology	CDS	49356	50087	.	-	0	ID=cds-WP_001830661.1;Parent=gene-RM680_RS09720;Dbxref=GenBank:WP_001830661.1;Name=WP_001830661.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274739.1;locus_tag=RM680_RS09720;product=phosphoadenylyl-sulfate reductase;protein_id=WP_001830661.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	pseudogene	50401	50877	.	-	.	ID=gene-RM680_RS09725;Name=RM680_RS09725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS09725;old_locus_tag=RM680_09730;pseudo=true
NZ_JAVRJI010000012.1	Protein Homology	CDS	50401	50877	.	-	0	ID=cds-RM680_RS09725;Parent=gene-RM680_RS09725;Note=internal stop;Ontology_term=GO:0006979,GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456708.1;locus_tag=RM680_RS09725;product=glutathione peroxidase;pseudo=true;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	50890	52233	.	-	.	ID=gene-RM680_RS09730;Name=RM680_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09730;old_locus_tag=RM680_09735
NZ_JAVRJI010000012.1	Protein Homology	CDS	50890	52233	.	-	0	ID=cds-WP_002456709.1;Parent=gene-RM680_RS09730;Dbxref=GenBank:WP_002456709.1;Name=WP_002456709.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012085178.1;locus_tag=RM680_RS09730;product=dihydrolipoyl dehydrogenase family protein;protein_id=WP_002456709.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	52250	52690	.	-	.	ID=gene-RM680_RS09735;Name=RM680_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09735;old_locus_tag=RM680_09740
NZ_JAVRJI010000012.1	Protein Homology	CDS	52250	52690	.	-	0	ID=cds-WP_002467790.1;Parent=gene-RM680_RS09735;Dbxref=GenBank:WP_002467790.1;Name=WP_002467790.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490895.1;locus_tag=RM680_RS09735;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_002467790.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	52910	53659	.	-	.	ID=gene-RM680_RS09740;Name=RM680_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09740;old_locus_tag=RM680_09745
NZ_JAVRJI010000012.1	Protein Homology	CDS	52910	53659	.	-	0	ID=cds-WP_020368384.1;Parent=gene-RM680_RS09740;Dbxref=GenBank:WP_020368384.1;Name=WP_020368384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368384.1;locus_tag=RM680_RS09740;product=zinc-ribbon domain-containing protein;protein_id=WP_020368384.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	53665	54990	.	-	.	ID=gene-RM680_RS09745;Name=RM680_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09745;old_locus_tag=RM680_09750
NZ_JAVRJI010000012.1	Protein Homology	CDS	53665	54990	.	-	0	ID=cds-WP_002467821.1;Parent=gene-RM680_RS09745;Dbxref=GenBank:WP_002467821.1;Name=WP_002467821.1;Ontology_term=GO:0008233,GO:0070007;gbkey=CDS;go_function=peptidase activity|0008233||IEA,glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464767.1;locus_tag=RM680_RS09745;product=PrsW family glutamic-type intramembrane protease;protein_id=WP_002467821.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	55135	56244	.	-	.	ID=gene-RM680_RS09750;Name=RM680_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09750;old_locus_tag=RM680_09755
NZ_JAVRJI010000012.1	Protein Homology	CDS	55135	56244	.	-	0	ID=cds-WP_001830606.1;Parent=gene-RM680_RS09750;Dbxref=GenBank:WP_001830606.1;Name=WP_001830606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363894.1;locus_tag=RM680_RS09750;product=hypothetical protein;protein_id=WP_001830606.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	56241	57425	.	-	.	ID=gene-RM680_RS09755;Name=RM680_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09755;old_locus_tag=RM680_09760
NZ_JAVRJI010000012.1	Protein Homology	CDS	56241	57425	.	-	0	ID=cds-WP_001830600.1;Parent=gene-RM680_RS09755;Dbxref=GenBank:WP_001830600.1;Name=WP_001830600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830600.1;locus_tag=RM680_RS09755;product=hypothetical protein;protein_id=WP_001830600.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	57555	59147	.	-	.	ID=gene-RM680_RS09760;Name=RM680_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09760;old_locus_tag=RM680_09765
NZ_JAVRJI010000012.1	Protein Homology	CDS	57555	59147	.	-	0	ID=cds-WP_010959312.1;Parent=gene-RM680_RS09760;Dbxref=GenBank:WP_010959312.1;Name=WP_010959312.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830676.1;locus_tag=RM680_RS09760;product=solute:sodium symporter family transporter;protein_id=WP_010959312.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	59669	60259	.	-	.	ID=gene-RM680_RS09765;Name=RM680_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09765;old_locus_tag=RM680_09770
NZ_JAVRJI010000012.1	Protein Homology	CDS	59669	60259	.	-	0	ID=cds-WP_001830621.1;Parent=gene-RM680_RS09765;Dbxref=GenBank:WP_001830621.1;Name=WP_001830621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511273.1;locus_tag=RM680_RS09765;product=DUF4064 domain-containing protein;protein_id=WP_001830621.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	60363	62375	.	-	.	ID=gene-RM680_RS09770;Name=RM680_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09770;old_locus_tag=RM680_09775
NZ_JAVRJI010000012.1	Protein Homology	CDS	60363	62375	.	-	0	ID=cds-WP_311563573.1;Parent=gene-RM680_RS09770;Dbxref=GenBank:WP_311563573.1;Name=WP_311563573.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012087922.1;locus_tag=RM680_RS09770;product=ABC transporter permease;protein_id=WP_311563573.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	62377	63126	.	-	.	ID=gene-RM680_RS09775;Name=RM680_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09775;old_locus_tag=RM680_09780
NZ_JAVRJI010000012.1	Protein Homology	CDS	62377	63126	.	-	0	ID=cds-WP_001830627.1;Parent=gene-RM680_RS09775;Dbxref=GenBank:WP_001830627.1;Name=WP_001830627.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495981.1;locus_tag=RM680_RS09775;product=ABC transporter ATP-binding protein;protein_id=WP_001830627.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	63237	64133	.	-	.	ID=gene-RM680_RS09780;Name=RM680_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09780;old_locus_tag=RM680_09785
NZ_JAVRJI010000012.1	Protein Homology	CDS	63237	64133	.	-	0	ID=cds-WP_002437988.1;Parent=gene-RM680_RS09780;Dbxref=GenBank:WP_002437988.1;Name=WP_002437988.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494881.1;locus_tag=RM680_RS09780;product=sensor histidine kinase;protein_id=WP_002437988.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	64139	64804	.	-	.	ID=gene-RM680_RS09785;Name=RM680_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09785;old_locus_tag=RM680_09790
NZ_JAVRJI010000012.1	Protein Homology	CDS	64139	64804	.	-	0	ID=cds-WP_001830679.1;Parent=gene-RM680_RS09785;Dbxref=GenBank:WP_001830679.1;Name=WP_001830679.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501407.1;locus_tag=RM680_RS09785;product=response regulator transcription factor;protein_id=WP_001830679.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	64835	65014	.	-	.	ID=gene-RM680_RS09790;Name=RM680_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09790;old_locus_tag=RM680_09795
NZ_JAVRJI010000012.1	Protein Homology	CDS	64835	65014	.	-	0	ID=cds-WP_001830653.1;Parent=gene-RM680_RS09790;Dbxref=GenBank:WP_001830653.1;Name=WP_001830653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830653.1;locus_tag=RM680_RS09790;product=hypothetical protein;protein_id=WP_001830653.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	65312	66781	.	+	.	ID=gene-RM680_RS09795;Name=RM680_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09795;old_locus_tag=RM680_09800
NZ_JAVRJI010000012.1	Protein Homology	CDS	65312	66781	.	+	0	ID=cds-WP_002437984.1;Parent=gene-RM680_RS09795;Dbxref=GenBank:WP_002437984.1;Name=WP_002437984.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830638.1;locus_tag=RM680_RS09795;product=alkaline phosphatase;protein_id=WP_002437984.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	66904	68448	.	-	.	ID=gene-RM680_RS09800;Name=RM680_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09800;old_locus_tag=RM680_09805
NZ_JAVRJI010000012.1	Protein Homology	CDS	66904	68448	.	-	0	ID=cds-WP_010959313.1;Parent=gene-RM680_RS09800;Dbxref=GenBank:WP_010959313.1;Name=WP_010959313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020367635.1;locus_tag=RM680_RS09800;product=NAD(P)H-binding protein;protein_id=WP_010959313.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	68639	70972	.	-	.	ID=gene-RM680_RS09805;Name=RM680_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09805;old_locus_tag=RM680_09810
NZ_JAVRJI010000012.1	Protein Homology	CDS	68639	70972	.	-	0	ID=cds-WP_002456722.1;Parent=gene-RM680_RS09805;Dbxref=GenBank:WP_002456722.1;Name=WP_002456722.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363888.1;locus_tag=RM680_RS09805;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_002456722.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	71170	71271	.	-	.	ID=gene-RM680_RS09810;Name=RM680_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09810;old_locus_tag=RM680_09815
NZ_JAVRJI010000012.1	Protein Homology	CDS	71170	71271	.	-	0	ID=cds-WP_002437978.1;Parent=gene-RM680_RS09810;Dbxref=GenBank:WP_002437978.1;Name=WP_002437978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898541.1;locus_tag=RM680_RS09810;product=SE2200 family small protein;protein_id=WP_002437978.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	71677	73014	.	-	.	ID=gene-RM680_RS09815;Name=RM680_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09815;old_locus_tag=RM680_09820
NZ_JAVRJI010000012.1	Protein Homology	CDS	71677	73014	.	-	0	ID=cds-WP_311563575.1;Parent=gene-RM680_RS09815;Dbxref=GenBank:WP_311563575.1;Name=WP_311563575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467828.1;locus_tag=RM680_RS09815;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_311563575.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	73964	74047	.	+	.	ID=gene-RM680_RS09820;Name=RM680_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09820;old_locus_tag=RM680_09830
NZ_JAVRJI010000012.1	Protein Homology	CDS	73964	74047	.	+	0	ID=cds-WP_020368261.1;Parent=gene-RM680_RS09820;Dbxref=GenBank:WP_020368261.1;Name=WP_020368261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495832.1;locus_tag=RM680_RS09820;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_020368261.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	gene	74199	76820	.	-	.	ID=gene-RM680_RS09825;Name=RM680_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09825;old_locus_tag=RM680_09835
NZ_JAVRJI010000012.1	Protein Homology	CDS	74199	76820	.	-	0	ID=cds-WP_002484637.1;Parent=gene-RM680_RS09825;Dbxref=GenBank:WP_002484637.1;Name=WP_002484637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484637.1;locus_tag=RM680_RS09825;product=TrlF family AAA-like ATPase;protein_id=WP_002484637.1;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	pseudogene	77217	77562	.	+	.	ID=gene-RM680_RS09830;Name=RM680_RS09830;end_range=77562,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS09830;old_locus_tag=RM680_09840;partial=true;pseudo=true
NZ_JAVRJI010000012.1	Protein Homology	CDS	77217	77562	.	+	0	ID=cds-RM680_RS09830;Parent=gene-RM680_RS09830;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=77562,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474535.1;locus_tag=RM680_RS09830;partial=true;product=recombinase family protein;pseudo=true;transl_table=11
NZ_JAVRJI010000012.1	RefSeq	pseudogene	77591	78114	.	-	.	ID=gene-RM680_RS09835;Name=RM680_RS09835;end_range=78114,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS09835;old_locus_tag=RM680_09845;partial=true;pseudo=true
NZ_JAVRJI010000012.1	Protein Homology	CDS	77591	78114	.	-	0	ID=cds-RM680_RS09835;Parent=gene-RM680_RS09835;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=78114,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001805333.1;locus_tag=RM680_RS09835;partial=true;product=DNA/RNA non-specific endonuclease;pseudo=true;transl_table=11
##sequence-region NZ_JAVRJI010000013.1 1 54095
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000013.1	RefSeq	region	1	54095	.	+	.	ID=NZ_JAVRJI010000013.1:1..54095;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000013.1	RefSeq	gene	1	606	.	+	.	ID=gene-RM680_RS12055;Name=RM680_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS12055;old_locus_tag=RM680_09850;partial=true;start_range=.,1
NZ_JAVRJI010000013.1	Protein Homology	CDS	1	606	.	+	0	ID=cds-WP_311563578.1;Parent=gene-RM680_RS12055;Dbxref=GenBank:WP_311563578.1;Name=WP_311563578.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: protein motif:HMM:NF012948.6;locus_tag=RM680_RS12055;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_311563578.1;start_range=.,1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	1497	1571	.	-	.	ID=gene-RM680_RS12015;Name=RM680_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS12015
NZ_JAVRJI010000013.1	Protein Homology	CDS	1497	1571	.	-	0	ID=cds-WP_126721019.1;Parent=gene-RM680_RS12015;Dbxref=GenBank:WP_126721019.1;Name=WP_126721019.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033428.5;locus_tag=RM680_RS12015;product=epsilon family phenol-soluble modulin;protein_id=WP_126721019.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	2296	2925	.	-	.	ID=gene-RM680_RS09850;Name=RM680_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09850;old_locus_tag=RM680_09860
NZ_JAVRJI010000013.1	Protein Homology	CDS	2296	2925	.	-	0	ID=cds-WP_311563579.1;Parent=gene-RM680_RS09850;Dbxref=GenBank:WP_311563579.1;Name=WP_311563579.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502719.1;locus_tag=RM680_RS09850;product=ABC transporter ATP-binding protein;protein_id=WP_311563579.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	2928	4970	.	-	.	ID=gene-RM680_RS09855;Name=RM680_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09855;old_locus_tag=RM680_09865
NZ_JAVRJI010000013.1	Protein Homology	CDS	2928	4970	.	-	0	ID=cds-WP_002456294.1;Parent=gene-RM680_RS09855;Dbxref=GenBank:WP_002456294.1;Name=WP_002456294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511322.1;locus_tag=RM680_RS09855;product=DUF1430 domain-containing protein;protein_id=WP_002456294.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	5064	5456	.	-	.	ID=gene-RM680_RS09860;Name=RM680_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09860;old_locus_tag=RM680_09870
NZ_JAVRJI010000013.1	Protein Homology	CDS	5064	5456	.	-	0	ID=cds-WP_002440650.1;Parent=gene-RM680_RS09860;Dbxref=GenBank:WP_002440650.1;Name=WP_002440650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489797.1;locus_tag=RM680_RS09860;product=lactococcin 972 family bacteriocin;protein_id=WP_002440650.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	5644	6012	.	-	.	ID=gene-RM680_RS09865;Name=RM680_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09865;old_locus_tag=RM680_09875
NZ_JAVRJI010000013.1	Protein Homology	CDS	5644	6012	.	-	0	ID=cds-WP_311563582.1;Parent=gene-RM680_RS09865;Dbxref=GenBank:WP_311563582.1;Name=WP_311563582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503834.1;locus_tag=RM680_RS09865;product=DUF3139 domain-containing protein;protein_id=WP_311563582.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	6141	6815	.	-	.	ID=gene-RM680_RS09870;Name=RM680_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09870;old_locus_tag=RM680_09880
NZ_JAVRJI010000013.1	Protein Homology	CDS	6141	6815	.	-	0	ID=cds-WP_021298942.1;Parent=gene-RM680_RS09870;Dbxref=GenBank:WP_021298942.1;Name=WP_021298942.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM680_RS09870;product=IS6 family transposase;protein_id=WP_021298942.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	6963	7778	.	+	.	ID=gene-RM680_RS09875;Name=RM680_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09875;old_locus_tag=RM680_09885
NZ_JAVRJI010000013.1	GeneMarkS-2+	CDS	6963	7778	.	+	0	ID=cds-WP_311563585.1;Parent=gene-RM680_RS09875;Dbxref=GenBank:WP_311563585.1;Name=WP_311563585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS09875;product=hypothetical protein;protein_id=WP_311563585.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	8083	8691	.	-	.	ID=gene-RM680_RS09880;Name=RM680_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09880;old_locus_tag=RM680_09890
NZ_JAVRJI010000013.1	Protein Homology	CDS	8083	8691	.	-	0	ID=cds-WP_151368361.1;Parent=gene-RM680_RS09880;Dbxref=GenBank:WP_151368361.1;Name=WP_151368361.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436987.1;locus_tag=RM680_RS09880;product=recombinase family protein;protein_id=WP_151368361.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	9111	10727	.	+	.	ID=gene-RM680_RS09885;Name=abc-f;gbkey=Gene;gene=abc-f;gene_biotype=protein_coding;locus_tag=RM680_RS09885;old_locus_tag=RM680_09895
NZ_JAVRJI010000013.1	Protein Homology	CDS	9111	10727	.	+	0	ID=cds-WP_070860668.1;Parent=gene-RM680_RS09885;Dbxref=GenBank:WP_070860668.1;Name=WP_070860668.1;Ontology_term=GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=abc-f;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498689.1;locus_tag=RM680_RS09885;product=ribosomal protection-like ABC-F family protein;protein_id=WP_070860668.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	10900	11001	.	-	.	ID=gene-RM680_RS09890;Name=RM680_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09890;old_locus_tag=RM680_09900
NZ_JAVRJI010000013.1	Protein Homology	CDS	10900	11001	.	-	0	ID=cds-WP_000228874.1;Parent=gene-RM680_RS09890;Dbxref=GenBank:WP_000228874.1;Name=WP_000228874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228874.1;locus_tag=RM680_RS09890;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_000228874.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	11205	12026	.	-	.	ID=gene-RM680_RS09895;Name=RM680_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09895;old_locus_tag=RM680_09905
NZ_JAVRJI010000013.1	GeneMarkS-2+	CDS	11205	12026	.	-	0	ID=cds-WP_070860669.1;Parent=gene-RM680_RS09895;Dbxref=GenBank:WP_070860669.1;Name=WP_070860669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS09895;product=hypothetical protein;protein_id=WP_070860669.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	12061	13359	.	-	.	ID=gene-RM680_RS09900;Name=RM680_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09900;old_locus_tag=RM680_09910
NZ_JAVRJI010000013.1	Protein Homology	CDS	12061	13359	.	-	0	ID=cds-WP_070860670.1;Parent=gene-RM680_RS09900;Dbxref=GenBank:WP_070860670.1;Name=WP_070860670.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009385579.1;locus_tag=RM680_RS09900;product=helix-turn-helix domain-containing protein;protein_id=WP_070860670.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	13667	14098	.	+	.	ID=gene-RM680_RS09905;Name=RM680_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09905;old_locus_tag=RM680_09915
NZ_JAVRJI010000013.1	Protein Homology	CDS	13667	14098	.	+	0	ID=cds-WP_311563588.1;Parent=gene-RM680_RS09905;Dbxref=GenBank:WP_311563588.1;Name=WP_311563588.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: protein motif:HMM:NF019886.6;locus_tag=RM680_RS09905;product=RNA polymerase sigma factor;protein_id=WP_311563588.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	14180	14500	.	+	.	ID=gene-RM680_RS09910;Name=RM680_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09910;old_locus_tag=RM680_09920
NZ_JAVRJI010000013.1	Protein Homology	CDS	14180	14500	.	+	0	ID=cds-WP_145453215.1;Parent=gene-RM680_RS09910;Dbxref=GenBank:WP_145453215.1;Name=WP_145453215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466864.1;locus_tag=RM680_RS09910;product=hypothetical protein;protein_id=WP_145453215.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	14500	15576	.	+	.	ID=gene-RM680_RS09915;Name=RM680_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09915;old_locus_tag=RM680_09925
NZ_JAVRJI010000013.1	Protein Homology	CDS	14500	15576	.	+	0	ID=cds-WP_070860673.1;Parent=gene-RM680_RS09915;Dbxref=GenBank:WP_070860673.1;Name=WP_070860673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125496.1;locus_tag=RM680_RS09915;product=cell division protein FtsK;protein_id=WP_070860673.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	15576	16178	.	+	.	ID=gene-RM680_RS09920;Name=RM680_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09920;old_locus_tag=RM680_09930
NZ_JAVRJI010000013.1	Protein Homology	CDS	15576	16178	.	+	0	ID=cds-WP_070860675.1;Parent=gene-RM680_RS09920;Dbxref=GenBank:WP_070860675.1;Name=WP_070860675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001233000.1;locus_tag=RM680_RS09920;product=hypothetical protein;protein_id=WP_070860675.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	16309	16875	.	+	.	ID=gene-RM680_RS09925;Name=RM680_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09925;old_locus_tag=RM680_09935
NZ_JAVRJI010000013.1	Protein Homology	CDS	16309	16875	.	+	0	ID=cds-WP_070860674.1;Parent=gene-RM680_RS09925;Dbxref=GenBank:WP_070860674.1;Name=WP_070860674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466862.1;locus_tag=RM680_RS09925;product=replication protein;protein_id=WP_070860674.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	16869	17819	.	-	.	ID=gene-RM680_RS09930;Name=RM680_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09930;old_locus_tag=RM680_09940
NZ_JAVRJI010000013.1	Protein Homology	CDS	16869	17819	.	-	0	ID=cds-WP_311563589.1;Parent=gene-RM680_RS09930;Dbxref=GenBank:WP_311563589.1;Name=WP_311563589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020365660.1;locus_tag=RM680_RS09930;product=replication initiator protein A;protein_id=WP_311563589.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	18248	18964	.	+	.	ID=gene-RM680_RS09935;Name=RM680_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09935;old_locus_tag=RM680_09945
NZ_JAVRJI010000013.1	Protein Homology	CDS	18248	18964	.	+	0	ID=cds-WP_070860728.1;Parent=gene-RM680_RS09935;Dbxref=GenBank:WP_070860728.1;Name=WP_070860728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368001.1;locus_tag=RM680_RS09935;product=DUF536 domain-containing protein;protein_id=WP_070860728.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	19116	19442	.	-	.	ID=gene-RM680_RS09940;Name=RM680_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09940;old_locus_tag=RM680_09950
NZ_JAVRJI010000013.1	Protein Homology	CDS	19116	19442	.	-	0	ID=cds-WP_070860729.1;Parent=gene-RM680_RS09940;Dbxref=GenBank:WP_070860729.1;Name=WP_070860729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477759.1;locus_tag=RM680_RS09940;product=hypothetical protein;protein_id=WP_070860729.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	19506	20435	.	+	.	ID=gene-RM680_RS09945;Name=RM680_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09945;old_locus_tag=RM680_09955
NZ_JAVRJI010000013.1	GeneMarkS-2+	CDS	19506	20435	.	+	0	ID=cds-WP_311563590.1;Parent=gene-RM680_RS09945;Dbxref=GenBank:WP_311563590.1;Name=WP_311563590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS09945;product=hypothetical protein;protein_id=WP_311563590.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	20661	21335	.	-	.	ID=gene-RM680_RS09950;Name=RM680_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09950;old_locus_tag=RM680_09960
NZ_JAVRJI010000013.1	Protein Homology	CDS	20661	21335	.	-	0	ID=cds-WP_021298942.1-2;Parent=gene-RM680_RS09950;Dbxref=GenBank:WP_021298942.1;Name=WP_021298942.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM680_RS09950;product=IS6 family transposase;protein_id=WP_021298942.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	21676	21843	.	+	.	ID=gene-RM680_RS09955;Name=RM680_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09955;old_locus_tag=RM680_09965
NZ_JAVRJI010000013.1	Protein Homology	CDS	21676	21843	.	+	0	ID=cds-WP_002452554.1;Parent=gene-RM680_RS09955;Dbxref=GenBank:WP_002452554.1;Name=WP_002452554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498713.1;locus_tag=RM680_RS09955;product=hypothetical protein;protein_id=WP_002452554.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	23156	23299	.	+	.	ID=gene-RM680_RS12020;Name=RM680_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS12020
NZ_JAVRJI010000013.1	Protein Homology	CDS	23156	23299	.	+	0	ID=cds-WP_162172474.1;Parent=gene-RM680_RS12020;Dbxref=GenBank:WP_162172474.1;Name=WP_162172474.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=RM680_RS12020;product=ATP-binding cassette domain-containing protein;protein_id=WP_162172474.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	24208	24768	.	-	.	ID=gene-RM680_RS09965;Name=RM680_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09965;old_locus_tag=RM680_09975
NZ_JAVRJI010000013.1	Protein Homology	CDS	24208	24768	.	-	0	ID=cds-WP_002498714.1;Parent=gene-RM680_RS09965;Dbxref=GenBank:WP_002498714.1;Name=WP_002498714.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494720.1;locus_tag=RM680_RS09965;product=LOG family protein;protein_id=WP_002498714.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	25026	26027	.	-	.	ID=gene-RM680_RS09970;Name=RM680_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09970;old_locus_tag=RM680_09980
NZ_JAVRJI010000013.1	Protein Homology	CDS	25026	26027	.	-	0	ID=cds-WP_311563591.1;Parent=gene-RM680_RS09970;Dbxref=GenBank:WP_311563591.1;Name=WP_311563591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498716.1;locus_tag=RM680_RS09970;product=replication initiator protein A;protein_id=WP_311563591.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	26407	27213	.	+	.	ID=gene-RM680_RS09975;Name=RM680_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09975;old_locus_tag=RM680_09985
NZ_JAVRJI010000013.1	Protein Homology	CDS	26407	27213	.	+	0	ID=cds-WP_002498717.1;Parent=gene-RM680_RS09975;Dbxref=GenBank:WP_002498717.1;Name=WP_002498717.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019236258.1;locus_tag=RM680_RS09975;product=ParA family protein;protein_id=WP_002498717.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	27331	27579	.	+	.	ID=gene-RM680_RS09980;Name=RM680_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09980;old_locus_tag=RM680_09990
NZ_JAVRJI010000013.1	Protein Homology	CDS	27331	27579	.	+	0	ID=cds-WP_002498718.1;Parent=gene-RM680_RS09980;Dbxref=GenBank:WP_002498718.1;Name=WP_002498718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636241.1;locus_tag=RM680_RS09980;product=hypothetical protein;protein_id=WP_002498718.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	27694	27933	.	+	.	ID=gene-RM680_RS09985;Name=RM680_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09985;old_locus_tag=RM680_09995
NZ_JAVRJI010000013.1	Protein Homology	CDS	27694	27933	.	+	0	ID=cds-WP_002498719.1;Parent=gene-RM680_RS09985;Dbxref=GenBank:WP_002498719.1;Name=WP_002498719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440830.1;locus_tag=RM680_RS09985;product=hypothetical protein;protein_id=WP_002498719.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	28008	28169	.	+	.	ID=gene-RM680_RS09990;Name=RM680_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09990;old_locus_tag=RM680_10000
NZ_JAVRJI010000013.1	Protein Homology	CDS	28008	28169	.	+	0	ID=cds-WP_002498720.1;Parent=gene-RM680_RS09990;Dbxref=GenBank:WP_002498720.1;Name=WP_002498720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498720.1;locus_tag=RM680_RS09990;product=BH0509 family protein;protein_id=WP_002498720.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	28196	28348	.	+	.	ID=gene-RM680_RS09995;Name=RM680_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS09995;old_locus_tag=RM680_10005
NZ_JAVRJI010000013.1	Protein Homology	CDS	28196	28348	.	+	0	ID=cds-WP_186312707.1;Parent=gene-RM680_RS09995;Dbxref=GenBank:WP_186312707.1;Name=WP_186312707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498932.1;locus_tag=RM680_RS09995;product=hypothetical protein;protein_id=WP_186312707.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	28415	28645	.	+	.	ID=gene-RM680_RS10000;Name=RM680_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10000;old_locus_tag=RM680_10010
NZ_JAVRJI010000013.1	Protein Homology	CDS	28415	28645	.	+	0	ID=cds-WP_002498722.1;Parent=gene-RM680_RS10000;Dbxref=GenBank:WP_002498722.1;Name=WP_002498722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832866.1;locus_tag=RM680_RS10000;product=hypothetical protein;protein_id=WP_002498722.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	28677	28859	.	+	.	ID=gene-RM680_RS10005;Name=RM680_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10005;old_locus_tag=RM680_10015
NZ_JAVRJI010000013.1	GeneMarkS-2+	CDS	28677	28859	.	+	0	ID=cds-WP_002498723.1;Parent=gene-RM680_RS10005;Dbxref=GenBank:WP_002498723.1;Name=WP_002498723.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS10005;product=hypothetical protein;protein_id=WP_002498723.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	29000	29401	.	+	.	ID=gene-RM680_RS10010;Name=RM680_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10010;old_locus_tag=RM680_10020
NZ_JAVRJI010000013.1	Protein Homology	CDS	29000	29401	.	+	0	ID=cds-WP_252963093.1;Parent=gene-RM680_RS10010;Dbxref=GenBank:WP_252963093.1;Name=WP_252963093.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018933.7;locus_tag=RM680_RS10010;product=transposase;protein_id=WP_252963093.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	29671	30939	.	+	.	ID=gene-RM680_RS10015;Name=pbp4;gbkey=Gene;gene=pbp4;gene_biotype=protein_coding;locus_tag=RM680_RS10015;old_locus_tag=RM680_10025
NZ_JAVRJI010000013.1	Protein Homology	CDS	29671	30939	.	+	0	ID=cds-WP_198895618.1;Parent=gene-RM680_RS10015;Dbxref=GenBank:WP_198895618.1;Name=WP_198895618.1;gbkey=CDS;gene=pbp4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503813.1;locus_tag=RM680_RS10015;product=penicillin-binding protein PBP4;protein_id=WP_198895618.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	pseudogene	31070	31223	.	+	.	ID=gene-RM680_RS10020;Name=pepG1;gbkey=Gene;gene=pepG1;gene_biotype=pseudogene;locus_tag=RM680_RS10020;old_locus_tag=RM680_10030;pseudo=true
NZ_JAVRJI010000013.1	Protein Homology	CDS	31070	31223	.	+	0	ID=cds-RM680_RS10020;Parent=gene-RM680_RS10020;Note=frameshifted;gbkey=CDS;gene=pepG1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366502.1;locus_tag=RM680_RS10020;product=type I toxin-antitoxin system toxin PepG1;pseudo=true;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	31401	31673	.	-	.	ID=gene-RM680_RS10025;Name=RM680_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10025;old_locus_tag=RM680_10035
NZ_JAVRJI010000013.1	Protein Homology	CDS	31401	31673	.	-	0	ID=cds-WP_237620538.1;Parent=gene-RM680_RS10025;Dbxref=GenBank:WP_237620538.1;Name=WP_237620538.1;Ontology_term=GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glutamic-type endopeptidase activity|0070007||IEA;inference=COORDINATES: protein motif:HMM:NF014566.6;locus_tag=RM680_RS10025;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_237620538.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	32405	32575	.	-	.	ID=gene-RM680_RS10030;Name=RM680_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10030;old_locus_tag=RM680_10045
NZ_JAVRJI010000013.1	Protein Homology	CDS	32405	32575	.	-	0	ID=cds-WP_002456306.1;Parent=gene-RM680_RS10030;Dbxref=GenBank:WP_002456306.1;Name=WP_002456306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456306.1;locus_tag=RM680_RS10030;product=hypothetical protein;protein_id=WP_002456306.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	pseudogene	32968	33327	.	+	.	ID=gene-RM680_RS10035;Name=RM680_RS10035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS10035;old_locus_tag=RM680_10050;partial=true;pseudo=true;start_range=.,32968
NZ_JAVRJI010000013.1	Protein Homology	CDS	32968	33327	.	+	0	ID=cds-RM680_RS10035;Parent=gene-RM680_RS10035;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485957.1;locus_tag=RM680_RS10035;partial=true;product=replication initiator protein A;pseudo=true;start_range=.,32968;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	pseudogene	33977	34099	.	-	.	ID=gene-RM680_RS10040;Name=RM680_RS10040;end_range=34099,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS10040;old_locus_tag=RM680_10055;partial=true;pseudo=true;start_range=.,33977
NZ_JAVRJI010000013.1	Protein Homology	CDS	33977	34099	.	-	0	ID=cds-RM680_RS10040;Parent=gene-RM680_RS10040;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006310,GO:0003677;end_range=34099,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010889940.1;locus_tag=RM680_RS10040;partial=true;product=plasmid recombination protein;pseudo=true;start_range=.,33977;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	34247	34501	.	+	.	ID=gene-RM680_RS10045;Name=RM680_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10045;old_locus_tag=RM680_10060
NZ_JAVRJI010000013.1	Protein Homology	CDS	34247	34501	.	+	0	ID=cds-WP_002452575.1;Parent=gene-RM680_RS10045;Dbxref=GenBank:WP_002452575.1;Name=WP_002452575.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452575.1;locus_tag=RM680_RS10045;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_002452575.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	34494	34760	.	+	.	ID=gene-RM680_RS10050;Name=RM680_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10050;old_locus_tag=RM680_10065
NZ_JAVRJI010000013.1	Protein Homology	CDS	34494	34760	.	+	0	ID=cds-WP_145353820.1;Parent=gene-RM680_RS10050;Dbxref=GenBank:WP_145353820.1;Name=WP_145353820.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641677.1;locus_tag=RM680_RS10050;product=Txe/YoeB family addiction module toxin;protein_id=WP_145353820.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	35323	35871	.	-	.	ID=gene-RM680_RS10055;Name=RM680_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10055;old_locus_tag=RM680_10070
NZ_JAVRJI010000013.1	Protein Homology	CDS	35323	35871	.	-	0	ID=cds-WP_064657848.1;Parent=gene-RM680_RS10055;Dbxref=GenBank:WP_064657848.1;Name=WP_064657848.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456262.1;locus_tag=RM680_RS10055;product=recombinase family protein;protein_id=WP_064657848.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	36169	36441	.	-	.	ID=gene-RM680_RS10060;Name=RM680_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10060;old_locus_tag=RM680_10075
NZ_JAVRJI010000013.1	Protein Homology	CDS	36169	36441	.	-	0	ID=cds-WP_039973713.1;Parent=gene-RM680_RS10060;Dbxref=GenBank:WP_039973713.1;Name=WP_039973713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368033.1;locus_tag=RM680_RS10060;product=hypothetical protein;protein_id=WP_039973713.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	36787	36957	.	-	.	ID=gene-RM680_RS10065;Name=RM680_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10065;old_locus_tag=RM680_10080
NZ_JAVRJI010000013.1	Protein Homology	CDS	36787	36957	.	-	0	ID=cds-WP_016898857.1;Parent=gene-RM680_RS10065;Dbxref=GenBank:WP_016898857.1;Name=WP_016898857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835857.1;locus_tag=RM680_RS10065;product=hypothetical protein;protein_id=WP_016898857.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	36974	37240	.	-	.	ID=gene-RM680_RS10070;Name=RM680_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10070;old_locus_tag=RM680_10085
NZ_JAVRJI010000013.1	Protein Homology	CDS	36974	37240	.	-	0	ID=cds-WP_145353822.1;Parent=gene-RM680_RS10070;Dbxref=GenBank:WP_145353822.1;Name=WP_145353822.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441971.1;locus_tag=RM680_RS10070;product=Txe/YoeB family addiction module toxin;protein_id=WP_145353822.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	37240	37497	.	-	.	ID=gene-RM680_RS10075;Name=RM680_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10075;old_locus_tag=RM680_10090
NZ_JAVRJI010000013.1	Protein Homology	CDS	37240	37497	.	-	0	ID=cds-WP_002441972.1;Parent=gene-RM680_RS10075;Dbxref=GenBank:WP_002441972.1;Name=WP_002441972.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502803.1;locus_tag=RM680_RS10075;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_002441972.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	37662	37796	.	+	.	ID=gene-RM680_RS12025;Name=RM680_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS12025
NZ_JAVRJI010000013.1	GeneMarkS-2+	CDS	37662	37796	.	+	0	ID=cds-WP_002441975.1;Parent=gene-RM680_RS12025;Dbxref=GenBank:WP_002441975.1;Name=WP_002441975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS12025;product=hypothetical protein;protein_id=WP_002441975.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	37809	38060	.	+	.	ID=gene-RM680_RS12030;Name=RM680_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS12030
NZ_JAVRJI010000013.1	Protein Homology	CDS	37809	38060	.	+	0	ID=cds-WP_375713980.1;Parent=gene-RM680_RS12030;Dbxref=GenBank:WP_375713980.1;Name=WP_375713980.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020438.6;locus_tag=RM680_RS12030;product=YolD-like family protein;protein_id=WP_375713980.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	38093	38272	.	-	.	ID=gene-RM680_RS10085;Name=RM680_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10085;old_locus_tag=RM680_10100
NZ_JAVRJI010000013.1	Protein Homology	CDS	38093	38272	.	-	0	ID=cds-WP_145353826.1;Parent=gene-RM680_RS10085;Dbxref=GenBank:WP_145353826.1;Name=WP_145353826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456267.1;locus_tag=RM680_RS10085;product=CsbD family protein;protein_id=WP_145353826.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	38941	39093	.	+	.	ID=gene-RM680_RS10090;Name=RM680_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10090;old_locus_tag=RM680_10110
NZ_JAVRJI010000013.1	Protein Homology	CDS	38941	39093	.	+	0	ID=cds-WP_311047662.1;Parent=gene-RM680_RS10090;Dbxref=GenBank:WP_311047662.1;Name=WP_311047662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494740.1;locus_tag=RM680_RS10090;product=hypothetical protein;protein_id=WP_311047662.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	39949	40227	.	+	.	ID=gene-RM680_RS10095;Name=RM680_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10095;old_locus_tag=RM680_10115
NZ_JAVRJI010000013.1	Protein Homology	CDS	39949	40227	.	+	0	ID=cds-WP_017464867.1;Parent=gene-RM680_RS10095;Dbxref=GenBank:WP_017464867.1;Name=WP_017464867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494739.1;locus_tag=RM680_RS10095;product=hypothetical protein;protein_id=WP_017464867.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	40229	40612	.	+	.	ID=gene-RM680_RS10100;Name=RM680_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10100;old_locus_tag=RM680_10120
NZ_JAVRJI010000013.1	Protein Homology	CDS	40229	40612	.	+	0	ID=cds-WP_059224731.1;Parent=gene-RM680_RS10100;Dbxref=GenBank:WP_059224731.1;Name=WP_059224731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835787.1;locus_tag=RM680_RS10100;product=hypothetical protein;protein_id=WP_059224731.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	40624	41445	.	+	.	ID=gene-RM680_RS10105;Name=mobL;gbkey=Gene;gene=mobL;gene_biotype=protein_coding;locus_tag=RM680_RS10105;old_locus_tag=RM680_10125
NZ_JAVRJI010000013.1	Protein Homology	CDS	40624	41445	.	+	0	ID=cds-WP_145353828.1;Parent=gene-RM680_RS10105;Dbxref=GenBank:WP_145353828.1;Name=WP_145353828.1;gbkey=CDS;gene=mobL;inference=COORDINATES: protein motif:HMM:NF037847.6;locus_tag=RM680_RS10105;product=relaxase MobL;protein_id=WP_145353828.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	43109	44080	.	-	.	ID=gene-RM680_RS10110;Name=RM680_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10110;old_locus_tag=RM680_10130
NZ_JAVRJI010000013.1	Protein Homology	CDS	43109	44080	.	-	0	ID=cds-WP_311047663.1;Parent=gene-RM680_RS10110;Dbxref=GenBank:WP_311047663.1;Name=WP_311047663.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464864.1;locus_tag=RM680_RS10110;product=DUF418 domain-containing protein;protein_id=WP_311047663.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	44171	44563	.	-	.	ID=gene-RM680_RS10115;Name=RM680_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10115;old_locus_tag=RM680_10135
NZ_JAVRJI010000013.1	Protein Homology	CDS	44171	44563	.	-	0	ID=cds-WP_311047664.1;Parent=gene-RM680_RS10115;Dbxref=GenBank:WP_311047664.1;Name=WP_311047664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368172.1;locus_tag=RM680_RS10115;product=hypothetical protein;protein_id=WP_311047664.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	44925	45686	.	-	.	ID=gene-RM680_RS10120;Name=RM680_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10120;old_locus_tag=RM680_10140
NZ_JAVRJI010000013.1	Protein Homology	CDS	44925	45686	.	-	0	ID=cds-WP_311047665.1;Parent=gene-RM680_RS10120;Dbxref=GenBank:WP_311047665.1;Name=WP_311047665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456275.1;locus_tag=RM680_RS10120;product=ABC transporter permease;protein_id=WP_311047665.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	45694	46383	.	-	.	ID=gene-RM680_RS10125;Name=RM680_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10125;old_locus_tag=RM680_10145
NZ_JAVRJI010000013.1	Protein Homology	CDS	45694	46383	.	-	0	ID=cds-WP_311047666.1;Parent=gene-RM680_RS10125;Dbxref=GenBank:WP_311047666.1;Name=WP_311047666.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368174.1;locus_tag=RM680_RS10125;product=ABC transporter ATP-binding protein;protein_id=WP_311047666.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	46419	46796	.	-	.	ID=gene-RM680_RS10130;Name=RM680_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10130;old_locus_tag=RM680_10150
NZ_JAVRJI010000013.1	Protein Homology	CDS	46419	46796	.	-	0	ID=cds-WP_311047667.1;Parent=gene-RM680_RS10130;Dbxref=GenBank:WP_311047667.1;Name=WP_311047667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498940.1;locus_tag=RM680_RS10130;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_311047667.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	pseudogene	47215	47457	.	+	.	ID=gene-RM680_RS10135;Name=RM680_RS10135;end_range=47457,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS10135;old_locus_tag=RM680_10155;partial=true;pseudo=true
NZ_JAVRJI010000013.1	Protein Homology	CDS	47215	47457	.	+	0	ID=cds-RM680_RS10135;Parent=gene-RM680_RS10135;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803;end_range=47457,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494449.1;locus_tag=RM680_RS10135;partial=true;product=transposase;pseudo=true;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	pseudogene	47929	48576	.	+	.	ID=gene-RM680_RS10140;Name=RM680_RS10140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS10140;old_locus_tag=RM680_10160;partial=true;pseudo=true;start_range=.,47929
NZ_JAVRJI010000013.1	Protein Homology	CDS	47929	48576	.	+	0	ID=cds-RM680_RS10140;Parent=gene-RM680_RS10140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467828.1;locus_tag=RM680_RS10140;partial=true;product=poly-gamma-glutamate hydrolase family protein;pseudo=true;start_range=.,47929;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	48978	49841	.	+	.	ID=gene-RM680_RS10145;Name=pmtC;gbkey=Gene;gene=pmtC;gene_biotype=protein_coding;locus_tag=RM680_RS10145;old_locus_tag=RM680_10165
NZ_JAVRJI010000013.1	Protein Homology	CDS	48978	49841	.	+	0	ID=cds-WP_002456280.1;Parent=gene-RM680_RS10145;Dbxref=GenBank:WP_002456280.1;Name=WP_002456280.1;gbkey=CDS;gene=pmtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456280.1;locus_tag=RM680_RS10145;product=phenol-soluble modulin export ABC transporter ATP-binding protein PmtC;protein_id=WP_002456280.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	49845	50573	.	+	.	ID=gene-RM680_RS10150;Name=pmtD;gbkey=Gene;gene=pmtD;gene_biotype=protein_coding;locus_tag=RM680_RS10150;old_locus_tag=RM680_10170
NZ_JAVRJI010000013.1	Protein Homology	CDS	49845	50573	.	+	0	ID=cds-WP_311047668.1;Parent=gene-RM680_RS10150;Dbxref=GenBank:WP_311047668.1;Name=WP_311047668.1;gbkey=CDS;gene=pmtD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898832.1;locus_tag=RM680_RS10150;product=phenol-soluble modulin export ABC transporter permease subunit PmtD;protein_id=WP_311047668.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	pseudogene	50799	51801	.	+	.	ID=gene-RM680_RS10155;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=pseudogene;locus_tag=RM680_RS10155;old_locus_tag=RM680_10175;pseudo=true
NZ_JAVRJI010000013.1	Protein Homology	CDS	50799	51801	.	+	0	ID=cds-RM680_RS10155;Parent=gene-RM680_RS10155;Note=frameshifted;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498921.1;locus_tag=RM680_RS10155;product=tryptophan--tRNA ligase;pseudo=true;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	51950	53248	.	+	.	ID=gene-RM680_RS10160;Name=RM680_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10160;old_locus_tag=RM680_10180
NZ_JAVRJI010000013.1	Protein Homology	CDS	51950	53248	.	+	0	ID=cds-WP_311563593.1;Parent=gene-RM680_RS10160;Dbxref=GenBank:WP_311563593.1;Name=WP_311563593.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456283.1;locus_tag=RM680_RS10160;product=MFS transporter;protein_id=WP_311563593.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	gene	53283	53699	.	-	.	ID=gene-RM680_RS10165;Name=RM680_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10165;old_locus_tag=RM680_10185
NZ_JAVRJI010000013.1	Protein Homology	CDS	53283	53699	.	-	0	ID=cds-WP_311563594.1;Parent=gene-RM680_RS10165;Dbxref=GenBank:WP_311563594.1;Name=WP_311563594.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511307.1;locus_tag=RM680_RS10165;product=plasmid mobilization protein;protein_id=WP_311563594.1;transl_table=11
NZ_JAVRJI010000013.1	RefSeq	pseudogene	53955	54095	.	+	.	ID=gene-RM680_RS10170;Name=RM680_RS10170;end_range=54095,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS10170;old_locus_tag=RM680_10190;partial=true;pseudo=true;start_range=.,53955
NZ_JAVRJI010000013.1	Protein Homology	CDS	53955	54095	.	+	0	ID=cds-RM680_RS10170;Parent=gene-RM680_RS10170;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=54095,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002958641.1;locus_tag=RM680_RS10170;partial=true;product=MobV family relaxase;pseudo=true;start_range=.,53955;transl_table=11
##sequence-region NZ_JAVRJI010000014.1 1 53732
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000014.1	RefSeq	region	1	53732	.	+	.	ID=NZ_JAVRJI010000014.1:1..53732;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000014.1	RefSeq	gene	1	2705	.	-	.	ID=gene-RM680_RS10175;Name=sdrG;gbkey=Gene;gene=sdrG;gene_biotype=protein_coding;locus_tag=RM680_RS10175;old_locus_tag=RM680_10195;partial=true;start_range=.,1
NZ_JAVRJI010000014.1	Protein Homology	CDS	1	2705	.	-	0	ID=cds-WP_311563595.1;Parent=gene-RM680_RS10175;Dbxref=GenBank:WP_311563595.1;Name=WP_311563595.1;gbkey=CDS;gene=sdrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499047.1;locus_tag=RM680_RS10175;partial=true;product=MSCRAMM family adhesin SdrG;protein_id=WP_311563595.1;start_range=.,1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	3149	3715	.	-	.	ID=gene-RM680_RS10180;Name=RM680_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10180;old_locus_tag=RM680_10200
NZ_JAVRJI010000014.1	Protein Homology	CDS	3149	3715	.	-	0	ID=cds-WP_001832301.1;Parent=gene-RM680_RS10180;Dbxref=GenBank:WP_001832301.1;Name=WP_001832301.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499115.1;locus_tag=RM680_RS10180;product=NADPH-dependent FMN reductase;protein_id=WP_001832301.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	3720	4598	.	-	.	ID=gene-RM680_RS10185;Name=RM680_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10185;old_locus_tag=RM680_10205
NZ_JAVRJI010000014.1	Protein Homology	CDS	3720	4598	.	-	0	ID=cds-WP_002456847.1;Parent=gene-RM680_RS10185;Dbxref=GenBank:WP_002456847.1;Name=WP_002456847.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477520.1;locus_tag=RM680_RS10185;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_002456847.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	4766	5272	.	-	.	ID=gene-RM680_RS10190;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=RM680_RS10190;old_locus_tag=RM680_10210
NZ_JAVRJI010000014.1	Protein Homology	CDS	4766	5272	.	-	0	ID=cds-WP_311563596.1;Parent=gene-RM680_RS10190;Dbxref=GenBank:WP_311563596.1;Name=WP_311563596.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832295.1;locus_tag=RM680_RS10190;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_311563596.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	5339	5956	.	+	.	ID=gene-RM680_RS10195;Name=RM680_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10195;old_locus_tag=RM680_10215
NZ_JAVRJI010000014.1	Protein Homology	CDS	5339	5956	.	+	0	ID=cds-WP_001832278.1;Parent=gene-RM680_RS10195;Dbxref=GenBank:WP_001832278.1;Name=WP_001832278.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832278.1;locus_tag=RM680_RS10195;product=deoxynucleoside kinase;protein_id=WP_001832278.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	5949	6611	.	+	.	ID=gene-RM680_RS10200;Name=RM680_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10200;old_locus_tag=RM680_10220
NZ_JAVRJI010000014.1	Protein Homology	CDS	5949	6611	.	+	0	ID=cds-WP_001832291.1;Parent=gene-RM680_RS10200;Dbxref=GenBank:WP_001832291.1;Name=WP_001832291.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499111.1;locus_tag=RM680_RS10200;product=deoxynucleoside kinase;protein_id=WP_001832291.1;transl_table=11
NZ_JAVRJI010000014.1	cmsearch	riboswitch	6766	6865	.	+	.	ID=id-NZ_JAVRJI010000014.1:6766..6865;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch
NZ_JAVRJI010000014.1	RefSeq	gene	6966	7718	.	+	.	ID=gene-RM680_RS10205;Name=RM680_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10205;old_locus_tag=RM680_10225
NZ_JAVRJI010000014.1	Protein Homology	CDS	6966	7718	.	+	0	ID=cds-WP_001832302.1;Parent=gene-RM680_RS10205;Dbxref=GenBank:WP_001832302.1;Name=WP_001832302.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486827.1;locus_tag=RM680_RS10205;product=3-oxoacyl-ACP reductase;protein_id=WP_001832302.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	7780	9084	.	+	.	ID=gene-RM680_RS10210;Name=RM680_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10210;old_locus_tag=RM680_10230
NZ_JAVRJI010000014.1	Protein Homology	CDS	7780	9084	.	+	0	ID=cds-WP_001832263.1;Parent=gene-RM680_RS10210;Dbxref=GenBank:WP_001832263.1;Name=WP_001832263.1;Note=This protein belongs to a clade of FMN-dependent monooxygenases%2C within a broader family of flavin-dependent oxidoreductases%2C the luciferase-like monooxygenase (LMM) family%2C some of whose members use coenzyme F420 rather than FMN.;Ontology_term=GO:0008152,GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494180.1;locus_tag=RM680_RS10210;product=NtaA/DmoA family FMN-dependent monooxygenase;protein_id=WP_001832263.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	9173	9868	.	-	.	ID=gene-RM680_RS10215;Name=RM680_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10215;old_locus_tag=RM680_10235
NZ_JAVRJI010000014.1	Protein Homology	CDS	9173	9868	.	-	0	ID=cds-WP_001832318.1;Parent=gene-RM680_RS10215;Dbxref=GenBank:WP_001832318.1;Name=WP_001832318.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502530.1;locus_tag=RM680_RS10215;product=HAD family hydrolase;protein_id=WP_001832318.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	10238	11932	.	-	.	ID=gene-RM680_RS10220;Name=RM680_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10220;old_locus_tag=RM680_10240
NZ_JAVRJI010000014.1	Protein Homology	CDS	10238	11932	.	-	0	ID=cds-WP_001832305.1;Parent=gene-RM680_RS10220;Dbxref=GenBank:WP_001832305.1;Name=WP_001832305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456843.1;locus_tag=RM680_RS10220;product=CDP-glycerol--poly(glycerophosphate) glycerophosphotransferase;protein_id=WP_001832305.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	11949	12980	.	-	.	ID=gene-RM680_RS10225;Name=RM680_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10225;old_locus_tag=RM680_10245
NZ_JAVRJI010000014.1	Protein Homology	CDS	11949	12980	.	-	0	ID=cds-WP_001832309.1;Parent=gene-RM680_RS10225;Dbxref=GenBank:WP_001832309.1;Name=WP_001832309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495850.1;locus_tag=RM680_RS10225;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_001832309.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	12973	13689	.	-	.	ID=gene-RM680_RS10230;Name=RM680_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10230;old_locus_tag=RM680_10250
NZ_JAVRJI010000014.1	Protein Homology	CDS	12973	13689	.	-	0	ID=cds-WP_001832311.1;Parent=gene-RM680_RS10230;Dbxref=GenBank:WP_001832311.1;Name=WP_001832311.1;Ontology_term=GO:0008299,GO:0070567;gbkey=CDS;go_function=cytidylyltransferase activity|0070567||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491432.1;locus_tag=RM680_RS10230;product=IspD/TarI family cytidylyltransferase;protein_id=WP_001832311.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	13959	15035	.	-	.	ID=gene-RM680_RS10235;Name=RM680_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10235;old_locus_tag=RM680_10255
NZ_JAVRJI010000014.1	Protein Homology	CDS	13959	15035	.	-	0	ID=cds-WP_001832304.1;Parent=gene-RM680_RS10235;Dbxref=GenBank:WP_001832304.1;Name=WP_001832304.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499108.1;locus_tag=RM680_RS10235;product=branched-chain amino acid aminotransferase;protein_id=WP_001832304.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	15492	16448	.	-	.	ID=gene-RM680_RS10240;Name=RM680_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10240;old_locus_tag=RM680_10260
NZ_JAVRJI010000014.1	Protein Homology	CDS	15492	16448	.	-	0	ID=cds-WP_001832307.1;Parent=gene-RM680_RS10240;Dbxref=GenBank:WP_001832307.1;Name=WP_001832307.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012084810.1;locus_tag=RM680_RS10240;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_001832307.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	16707	16916	.	+	.	ID=gene-RM680_RS10245;Name=RM680_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10245;old_locus_tag=RM680_10265
NZ_JAVRJI010000014.1	Protein Homology	CDS	16707	16916	.	+	0	ID=cds-WP_002469109.1;Parent=gene-RM680_RS10245;Dbxref=GenBank:WP_002469109.1;Name=WP_002469109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477512.1;locus_tag=RM680_RS10245;product=hypothetical protein;protein_id=WP_002469109.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	17004	17954	.	-	.	ID=gene-RM680_RS10250;Name=RM680_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10250;old_locus_tag=RM680_10270
NZ_JAVRJI010000014.1	Protein Homology	CDS	17004	17954	.	-	0	ID=cds-WP_311563597.1;Parent=gene-RM680_RS10250;Dbxref=GenBank:WP_311563597.1;Name=WP_311563597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438698.1;locus_tag=RM680_RS10250;product=ornithine cyclodeaminase family protein;protein_id=WP_311563597.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	18207	18716	.	-	.	ID=gene-RM680_RS10255;Name=RM680_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10255;old_locus_tag=RM680_10275
NZ_JAVRJI010000014.1	Protein Homology	CDS	18207	18716	.	-	0	ID=cds-WP_001832276.1;Parent=gene-RM680_RS10255;Dbxref=GenBank:WP_001832276.1;Name=WP_001832276.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484548.1;locus_tag=RM680_RS10255;product=GNAT family N-acetyltransferase;protein_id=WP_001832276.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	19290	20459	.	+	.	ID=gene-RM680_RS10260;Name=RM680_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10260;old_locus_tag=RM680_10280
NZ_JAVRJI010000014.1	Protein Homology	CDS	19290	20459	.	+	0	ID=cds-WP_002494717.1;Parent=gene-RM680_RS10260;Dbxref=GenBank:WP_002494717.1;Name=WP_002494717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498065.1;locus_tag=RM680_RS10260;product=M20 family metallopeptidase;protein_id=WP_002494717.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	20585	21769	.	-	.	ID=gene-RM680_RS10265;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=RM680_RS10265;old_locus_tag=RM680_10285
NZ_JAVRJI010000014.1	Protein Homology	CDS	20585	21769	.	-	0	ID=cds-WP_001832289.1;Parent=gene-RM680_RS10265;Dbxref=GenBank:WP_001832289.1;Name=WP_001832289.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499102.1;locus_tag=RM680_RS10265;product=elongation factor Tu;protein_id=WP_001832289.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	21988	24069	.	-	.	ID=gene-RM680_RS10270;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=RM680_RS10270;old_locus_tag=RM680_10290
NZ_JAVRJI010000014.1	Protein Homology	CDS	21988	24069	.	-	0	ID=cds-WP_001832287.1;Parent=gene-RM680_RS10270;Dbxref=GenBank:WP_001832287.1;Name=WP_001832287.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804675.1;locus_tag=RM680_RS10270;product=elongation factor G;protein_id=WP_001832287.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	24189	24659	.	-	.	ID=gene-RM680_RS10275;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=RM680_RS10275;old_locus_tag=RM680_10295
NZ_JAVRJI010000014.1	Protein Homology	CDS	24189	24659	.	-	0	ID=cds-WP_001137495.1;Parent=gene-RM680_RS10275;Dbxref=GenBank:WP_001137495.1;Name=WP_001137495.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=RM680_RS10275;product=30S ribosomal protein S7;protein_id=WP_001137495.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	24730	25143	.	-	.	ID=gene-RM680_RS10280;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=RM680_RS10280;old_locus_tag=RM680_10300
NZ_JAVRJI010000014.1	Protein Homology	CDS	24730	25143	.	-	0	ID=cds-WP_001833079.1;Parent=gene-RM680_RS10280;Dbxref=GenBank:WP_001833079.1;Name=WP_001833079.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142337.1;locus_tag=RM680_RS10280;product=30S ribosomal protein S12;protein_id=WP_001833079.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	25234	25494	.	-	.	ID=gene-RM680_RS10285;Name=RM680_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10285;old_locus_tag=RM680_10305
NZ_JAVRJI010000014.1	Protein Homology	CDS	25234	25494	.	-	0	ID=cds-WP_001832275.1;Parent=gene-RM680_RS10285;Dbxref=GenBank:WP_001832275.1;Name=WP_001832275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505638.1;locus_tag=RM680_RS10285;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=WP_001832275.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	25822	29418	.	-	.	ID=gene-RM680_RS10290;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=RM680_RS10290;old_locus_tag=RM680_10310
NZ_JAVRJI010000014.1	Protein Homology	CDS	25822	29418	.	-	0	ID=cds-WP_002438689.1;Parent=gene-RM680_RS10290;Dbxref=GenBank:WP_002438689.1;Name=WP_002438689.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499097.1;locus_tag=RM680_RS10290;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002438689.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	29577	33128	.	-	.	ID=gene-RM680_RS10295;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=RM680_RS10295;old_locus_tag=RM680_10315
NZ_JAVRJI010000014.1	Protein Homology	CDS	29577	33128	.	-	0	ID=cds-WP_001833083.1;Parent=gene-RM680_RS10295;Dbxref=GenBank:WP_001833083.1;Name=WP_001833083.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499096.2;locus_tag=RM680_RS10295;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_001833083.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	33344	33952	.	-	.	ID=gene-RM680_RS10300;Name=RM680_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10300;old_locus_tag=RM680_10320
NZ_JAVRJI010000014.1	Protein Homology	CDS	33344	33952	.	-	0	ID=cds-WP_002495284.1;Parent=gene-RM680_RS10300;Dbxref=GenBank:WP_002495284.1;Name=WP_002495284.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505637.1;locus_tag=RM680_RS10300;product=class I SAM-dependent methyltransferase;protein_id=WP_002495284.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	34144	34512	.	-	.	ID=gene-RM680_RS10305;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=RM680_RS10305;old_locus_tag=RM680_10325
NZ_JAVRJI010000014.1	Protein Homology	CDS	34144	34512	.	-	0	ID=cds-WP_001832283.1;Parent=gene-RM680_RS10305;Dbxref=GenBank:WP_001832283.1;Name=WP_001832283.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1;locus_tag=RM680_RS10305;product=50S ribosomal protein L7/L12;protein_id=WP_001832283.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	34550	35050	.	-	.	ID=gene-RM680_RS10310;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=RM680_RS10310;old_locus_tag=RM680_10330
NZ_JAVRJI010000014.1	Protein Homology	CDS	34550	35050	.	-	0	ID=cds-WP_001832306.1;Parent=gene-RM680_RS10310;Dbxref=GenBank:WP_001832306.1;Name=WP_001832306.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499093.1;locus_tag=RM680_RS10310;product=50S ribosomal protein L10;protein_id=WP_001832306.1;transl_table=11
NZ_JAVRJI010000014.1	cmsearch	sequence_feature	35090	35237	.	-	.	ID=id-NZ_JAVRJI010000014.1:35090..35237;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5
NZ_JAVRJI010000014.1	RefSeq	gene	35325	36020	.	-	.	ID=gene-RM680_RS10315;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=RM680_RS10315;old_locus_tag=RM680_10335
NZ_JAVRJI010000014.1	Protein Homology	CDS	35325	36020	.	-	0	ID=cds-WP_001832314.1;Parent=gene-RM680_RS10315;Dbxref=GenBank:WP_001832314.1;Name=WP_001832314.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468572.1;locus_tag=RM680_RS10315;product=50S ribosomal protein L1;protein_id=WP_001832314.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	36233	36655	.	-	.	ID=gene-RM680_RS10320;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=RM680_RS10320;old_locus_tag=RM680_10340
NZ_JAVRJI010000014.1	Protein Homology	CDS	36233	36655	.	-	0	ID=cds-WP_001832298.1;Parent=gene-RM680_RS10320;Dbxref=GenBank:WP_001832298.1;Name=WP_001832298.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664221.1;locus_tag=RM680_RS10320;product=50S ribosomal protein L11;protein_id=WP_001832298.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	36987	37535	.	-	.	ID=gene-RM680_RS10325;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=RM680_RS10325;old_locus_tag=RM680_10345
NZ_JAVRJI010000014.1	Protein Homology	CDS	36987	37535	.	-	0	ID=cds-WP_001832303.1;Parent=gene-RM680_RS10325;Dbxref=GenBank:WP_001832303.1;Name=WP_001832303.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1;locus_tag=RM680_RS10325;product=transcription termination/antitermination protein NusG;protein_id=WP_001832303.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	37546	37728	.	-	.	ID=gene-RM680_RS10330;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=RM680_RS10330;old_locus_tag=RM680_10350
NZ_JAVRJI010000014.1	Protein Homology	CDS	37546	37728	.	-	0	ID=cds-WP_002438679.1;Parent=gene-RM680_RS10330;Dbxref=GenBank:WP_002438679.1;Name=WP_002438679.1;Ontology_term=GO:0009306,GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499089.2;locus_tag=RM680_RS10330;product=preprotein translocase subunit SecE;protein_id=WP_002438679.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	37791	37934	.	-	.	ID=gene-RM680_RS10335;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=RM680_RS10335;old_locus_tag=RM680_10355
NZ_JAVRJI010000014.1	Protein Homology	CDS	37791	37934	.	-	0	ID=cds-WP_001832285.1;Parent=gene-RM680_RS10335;Dbxref=GenBank:WP_001832285.1;Name=WP_001832285.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451211.1;locus_tag=RM680_RS10335;product=50S ribosomal protein L33;protein_id=WP_001832285.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	38058	38633	.	-	.	ID=gene-RM680_RS10340;Name=RM680_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10340;old_locus_tag=RM680_10360
NZ_JAVRJI010000014.1	Protein Homology	CDS	38058	38633	.	-	0	ID=cds-WP_002445734.1;Parent=gene-RM680_RS10340;Dbxref=GenBank:WP_002445734.1;Name=WP_002445734.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832284.1;locus_tag=RM680_RS10340;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_002445734.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	38703	39230	.	-	.	ID=gene-RM680_RS10345;Name=RM680_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10345;old_locus_tag=RM680_10365
NZ_JAVRJI010000014.1	Protein Homology	CDS	38703	39230	.	-	0	ID=cds-WP_001832317.1;Parent=gene-RM680_RS10345;Dbxref=GenBank:WP_001832317.1;Name=WP_001832317.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832317.1;locus_tag=RM680_RS10345;product=NYN domain-containing protein;protein_id=WP_001832317.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	39227	39976	.	-	.	ID=gene-RM680_RS10350;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=RM680_RS10350;old_locus_tag=RM680_10370
NZ_JAVRJI010000014.1	Protein Homology	CDS	39227	39976	.	-	0	ID=cds-WP_002494715.1;Parent=gene-RM680_RS10350;Dbxref=GenBank:WP_002494715.1;Name=WP_002494715.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276729.1;locus_tag=RM680_RS10350;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_002494715.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	39984	40370	.	-	.	ID=gene-RM680_RS10355;Name=RM680_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10355;old_locus_tag=RM680_10375
NZ_JAVRJI010000014.1	Protein Homology	CDS	39984	40370	.	-	0	ID=cds-WP_002469321.1;Parent=gene-RM680_RS10355;Dbxref=GenBank:WP_002469321.1;Name=WP_002469321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491434.1;locus_tag=RM680_RS10355;product=Mini-ribonuclease 3;protein_id=WP_002469321.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	40375	41775	.	-	.	ID=gene-RM680_RS10360;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=RM680_RS10360;old_locus_tag=RM680_10380
NZ_JAVRJI010000014.1	Protein Homology	CDS	40375	41775	.	-	0	ID=cds-WP_002445731.1;Parent=gene-RM680_RS10360;Dbxref=GenBank:WP_002445731.1;Name=WP_002445731.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631968.1;locus_tag=RM680_RS10360;product=cysteine--tRNA ligase;protein_id=WP_002445731.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	41759	42388	.	-	.	ID=gene-RM680_RS10365;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=RM680_RS10365;old_locus_tag=RM680_10385
NZ_JAVRJI010000014.1	Protein Homology	CDS	41759	42388	.	-	0	ID=cds-WP_002438669.1;Parent=gene-RM680_RS10365;Dbxref=GenBank:WP_002438669.1;Name=WP_002438669.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187697.1;locus_tag=RM680_RS10365;product=serine O-acetyltransferase;protein_id=WP_002438669.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	42773	44227	.	-	.	ID=gene-RM680_RS10370;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=RM680_RS10370;old_locus_tag=RM680_10390
NZ_JAVRJI010000014.1	Protein Homology	CDS	42773	44227	.	-	0	ID=cds-WP_002438667.1;Parent=gene-RM680_RS10370;Dbxref=GenBank:WP_002438667.1;Name=WP_002438667.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511256.1;locus_tag=RM680_RS10370;product=glutamate--tRNA ligase;protein_id=WP_002438667.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	44637	45695	.	-	.	ID=gene-RM680_RS10375;Name=RM680_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10375;old_locus_tag=RM680_10395
NZ_JAVRJI010000014.1	Protein Homology	CDS	44637	45695	.	-	0	ID=cds-WP_002489368.1;Parent=gene-RM680_RS10375;Dbxref=GenBank:WP_002489368.1;Name=WP_002489368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465100.1;locus_tag=RM680_RS10375;product=PIN/TRAM domain-containing protein;protein_id=WP_002489368.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	45749	47122	.	-	.	ID=gene-RM680_RS10380;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=RM680_RS10380;old_locus_tag=RM680_10400
NZ_JAVRJI010000014.1	Protein Homology	CDS	45749	47122	.	-	0	ID=cds-WP_002438664.1;Parent=gene-RM680_RS10380;Dbxref=GenBank:WP_002438664.1;Name=WP_002438664.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477499.1;locus_tag=RM680_RS10380;product=DNA repair protein RadA;protein_id=WP_002438664.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	47613	50066	.	-	.	ID=gene-RM680_RS10385;Name=RM680_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10385;old_locus_tag=RM680_10405
NZ_JAVRJI010000014.1	Protein Homology	CDS	47613	50066	.	-	0	ID=cds-WP_001832300.1;Parent=gene-RM680_RS10385;Dbxref=GenBank:WP_001832300.1;Name=WP_001832300.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465099.1;locus_tag=RM680_RS10385;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_001832300.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	50080	51087	.	-	.	ID=gene-RM680_RS10390;Name=RM680_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10390;old_locus_tag=RM680_10410
NZ_JAVRJI010000014.1	Protein Homology	CDS	50080	51087	.	-	0	ID=cds-WP_002438663.1;Parent=gene-RM680_RS10390;Dbxref=GenBank:WP_002438663.1;Name=WP_002438663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499077.1;locus_tag=RM680_RS10390;product=protein arginine kinase;protein_id=WP_002438663.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	51077	51640	.	-	.	ID=gene-RM680_RS10395;Name=RM680_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10395;old_locus_tag=RM680_10415
NZ_JAVRJI010000014.1	Protein Homology	CDS	51077	51640	.	-	0	ID=cds-WP_002469112.1;Parent=gene-RM680_RS10395;Dbxref=GenBank:WP_002469112.1;Name=WP_002469112.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832265.1;locus_tag=RM680_RS10395;product=UvrB/UvrC motif-containing protein;protein_id=WP_002469112.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	51661	52122	.	-	.	ID=gene-RM680_RS10400;Name=RM680_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10400;old_locus_tag=RM680_10420
NZ_JAVRJI010000014.1	Protein Homology	CDS	51661	52122	.	-	0	ID=cds-WP_001832288.1;Parent=gene-RM680_RS10400;Dbxref=GenBank:WP_001832288.1;Name=WP_001832288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551761.1;locus_tag=RM680_RS10400;product=CtsR family transcriptional regulator;protein_id=WP_001832288.1;transl_table=11
NZ_JAVRJI010000014.1	RefSeq	gene	52279	53493	.	+	.	ID=gene-RM680_RS10405;Name=RM680_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10405;old_locus_tag=RM680_10425
NZ_JAVRJI010000014.1	Protein Homology	CDS	52279	53493	.	+	0	ID=cds-WP_002438658.1;Parent=gene-RM680_RS10405;Dbxref=GenBank:WP_002438658.1;Name=WP_002438658.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363115.1;locus_tag=RM680_RS10405;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_002438658.1;transl_table=11
##sequence-region NZ_JAVRJI010000015.1 1 50625
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000015.1	RefSeq	region	1	50625	.	+	.	ID=NZ_JAVRJI010000015.1:1..50625;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000015.1	RefSeq	gene	171	923	.	-	.	ID=gene-RM680_RS10410;Name=RM680_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10410;old_locus_tag=RM680_10430
NZ_JAVRJI010000015.1	Protein Homology	CDS	171	923	.	-	0	ID=cds-WP_002445809.1;Parent=gene-RM680_RS10410;Dbxref=GenBank:WP_002445809.1;Name=WP_002445809.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501445.1;locus_tag=RM680_RS10410;product=MerR family transcriptional regulator;protein_id=WP_002445809.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	978	1613	.	-	.	ID=gene-RM680_RS10415;Name=RM680_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10415;old_locus_tag=RM680_10435
NZ_JAVRJI010000015.1	Protein Homology	CDS	978	1613	.	-	0	ID=cds-WP_002470119.1;Parent=gene-RM680_RS10415;Dbxref=GenBank:WP_002470119.1;Name=WP_002470119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361842.1;locus_tag=RM680_RS10415;product=endonuclease III domain-containing protein;protein_id=WP_002470119.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	1855	3516	.	-	.	ID=gene-RM680_RS10420;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=RM680_RS10420;old_locus_tag=RM680_10440
NZ_JAVRJI010000015.1	Protein Homology	CDS	1855	3516	.	-	0	ID=cds-WP_002456919.1;Parent=gene-RM680_RS10420;Dbxref=GenBank:WP_002456919.1;Name=WP_002456919.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499174.1;locus_tag=RM680_RS10420;product=arginine--tRNA ligase;protein_id=WP_002456919.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	3513	3929	.	-	.	ID=gene-RM680_RS10425;Name=RM680_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10425;old_locus_tag=RM680_10445
NZ_JAVRJI010000015.1	Protein Homology	CDS	3513	3929	.	-	0	ID=cds-WP_002458357.1;Parent=gene-RM680_RS10425;Dbxref=GenBank:WP_002458357.1;Name=WP_002458357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832036.1;locus_tag=RM680_RS10425;product=DUF1934 domain-containing protein;protein_id=WP_002458357.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	4419	4811	.	-	.	ID=gene-RM680_RS10430;Name=RM680_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10430;old_locus_tag=RM680_10450
NZ_JAVRJI010000015.1	Protein Homology	CDS	4419	4811	.	-	0	ID=cds-WP_002445784.1;Parent=gene-RM680_RS10430;Dbxref=GenBank:WP_002445784.1;Name=WP_002445784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445784.1;locus_tag=RM680_RS10430;product=hypothetical protein;protein_id=WP_002445784.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	4894	5916	.	-	.	ID=gene-RM680_RS10435;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=RM680_RS10435;old_locus_tag=RM680_10455
NZ_JAVRJI010000015.1	Protein Homology	CDS	4894	5916	.	-	0	ID=cds-WP_002445783.1;Parent=gene-RM680_RS10435;Dbxref=GenBank:WP_002445783.1;Name=WP_002445783.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834665.1;locus_tag=RM680_RS10435;product=alcohol dehydrogenase AdhP;protein_id=WP_002445783.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	6205	7473	.	+	.	ID=gene-RM680_RS10440;Name=larA;gbkey=Gene;gene=larA;gene_biotype=protein_coding;locus_tag=RM680_RS10440;old_locus_tag=RM680_10460
NZ_JAVRJI010000015.1	Protein Homology	CDS	6205	7473	.	+	0	ID=cds-WP_002495845.1;Parent=gene-RM680_RS10440;Dbxref=GenBank:WP_002495845.1;Name=WP_002495845.1;Ontology_term=GO:0050043;gbkey=CDS;gene=larA;go_function=lactate racemase activity|0050043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468701.1;locus_tag=RM680_RS10440;product=nickel-dependent lactate racemase;protein_id=WP_002495845.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	7493	8320	.	+	.	ID=gene-RM680_RS10445;Name=larE;gbkey=Gene;gene=larE;gene_biotype=protein_coding;locus_tag=RM680_RS10445;old_locus_tag=RM680_10465
NZ_JAVRJI010000015.1	Protein Homology	CDS	7493	8320	.	+	0	ID=cds-WP_001832048.1;Parent=gene-RM680_RS10445;Dbxref=GenBank:WP_001832048.1;Name=WP_001832048.1;Ontology_term=GO:0016783;gbkey=CDS;gene=larE;go_function=sulfurtransferase activity|0016783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362941.1;locus_tag=RM680_RS10445;product=ATP-dependent sacrificial sulfur transferase LarE;protein_id=WP_001832048.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	8335	9111	.	+	.	ID=gene-RM680_RS10450;Name=larB;gbkey=Gene;gene=larB;gene_biotype=protein_coding;locus_tag=RM680_RS10450;old_locus_tag=RM680_10470
NZ_JAVRJI010000015.1	Protein Homology	CDS	8335	9111	.	+	0	ID=cds-WP_001832104.1;Parent=gene-RM680_RS10450;Dbxref=GenBank:WP_001832104.1;Name=WP_001832104.1;Ontology_term=GO:0016787;gbkey=CDS;gene=larB;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470587.1;locus_tag=RM680_RS10450;product=nickel pincer cofactor biosynthesis protein LarB;protein_id=WP_001832104.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	9108	10295	.	+	.	ID=gene-RM680_RS10455;Name=larC;gbkey=Gene;gene=larC;gene_biotype=protein_coding;locus_tag=RM680_RS10455;old_locus_tag=RM680_10475
NZ_JAVRJI010000015.1	Protein Homology	CDS	9108	10295	.	+	0	ID=cds-WP_001832070.1;Parent=gene-RM680_RS10455;Dbxref=GenBank:WP_001832070.1;Name=WP_001832070.1;gbkey=CDS;gene=larC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503102.1;locus_tag=RM680_RS10455;product=nickel pincer cofactor biosynthesis protein LarC;protein_id=WP_001832070.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	10382	10888	.	-	.	ID=gene-RM680_RS10460;Name=RM680_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10460;old_locus_tag=RM680_10480
NZ_JAVRJI010000015.1	Protein Homology	CDS	10382	10888	.	-	0	ID=cds-WP_001832182.1;Parent=gene-RM680_RS10460;Dbxref=GenBank:WP_001832182.1;Name=WP_001832182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458364.1;locus_tag=RM680_RS10460;product=YwhD family protein;protein_id=WP_001832182.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	10945	12243	.	-	.	ID=gene-RM680_RS10465;Name=RM680_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10465;old_locus_tag=RM680_10485
NZ_JAVRJI010000015.1	Protein Homology	CDS	10945	12243	.	-	0	ID=cds-WP_001832138.1;Parent=gene-RM680_RS10465;Dbxref=GenBank:WP_001832138.1;Name=WP_001832138.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487628.1;locus_tag=RM680_RS10465;product=HD domain-containing protein;protein_id=WP_001832138.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	12335	12811	.	-	.	ID=gene-RM680_RS10470;Name=RM680_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10470;old_locus_tag=RM680_10490
NZ_JAVRJI010000015.1	Protein Homology	CDS	12335	12811	.	-	0	ID=cds-WP_001832180.1;Parent=gene-RM680_RS10470;Dbxref=GenBank:WP_001832180.1;Name=WP_001832180.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495271.1;locus_tag=RM680_RS10470;product=GNAT family N-acetyltransferase;protein_id=WP_001832180.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	13260	13934	.	-	.	ID=gene-RM680_RS10475;Name=RM680_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10475;old_locus_tag=RM680_10495
NZ_JAVRJI010000015.1	Protein Homology	CDS	13260	13934	.	-	0	ID=cds-WP_001832122.1;Parent=gene-RM680_RS10475;Dbxref=GenBank:WP_001832122.1;Name=WP_001832122.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=RM680_RS10475;product=IS6 family transposase;protein_id=WP_001832122.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	14145	14714	.	-	.	ID=gene-RM680_RS10480;Name=RM680_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10480;old_locus_tag=RM680_10500
NZ_JAVRJI010000015.1	Protein Homology	CDS	14145	14714	.	-	0	ID=cds-WP_001832161.1;Parent=gene-RM680_RS10480;Dbxref=GenBank:WP_001832161.1;Name=WP_001832161.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012087790.1;locus_tag=RM680_RS10480;product=TetR/AcrR family transcriptional regulator;protein_id=WP_001832161.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	15064	16008	.	-	.	ID=gene-RM680_RS10485;Name=RM680_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10485;old_locus_tag=RM680_10505
NZ_JAVRJI010000015.1	Protein Homology	CDS	15064	16008	.	-	0	ID=cds-WP_001832065.1;Parent=gene-RM680_RS10485;Dbxref=GenBank:WP_001832065.1;Name=WP_001832065.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832065.1;locus_tag=RM680_RS10485;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_001832065.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	16032	18713	.	-	.	ID=gene-RM680_RS10490;Name=RM680_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10490;old_locus_tag=RM680_10510
NZ_JAVRJI010000015.1	Protein Homology	CDS	16032	18713	.	-	0	ID=cds-WP_311563606.1;Parent=gene-RM680_RS10490;Dbxref=GenBank:WP_311563606.1;Name=WP_311563606.1;Ontology_term=GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012087791.1;locus_tag=RM680_RS10490;product=MMPL family transporter;protein_id=WP_311563606.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	19174	20112	.	-	.	ID=gene-RM680_RS10495;Name=RM680_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10495;old_locus_tag=RM680_10515
NZ_JAVRJI010000015.1	Protein Homology	CDS	19174	20112	.	-	0	ID=cds-WP_001832085.1;Parent=gene-RM680_RS10495;Dbxref=GenBank:WP_001832085.1;Name=WP_001832085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491422.1;locus_tag=RM680_RS10495;product=aldo/keto reductase;protein_id=WP_001832085.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	20269	20691	.	+	.	ID=gene-RM680_RS10500;Name=hypR;gbkey=Gene;gene=hypR;gene_biotype=protein_coding;locus_tag=RM680_RS10500;old_locus_tag=RM680_10520
NZ_JAVRJI010000015.1	Protein Homology	CDS	20269	20691	.	+	0	ID=cds-WP_001832072.1;Parent=gene-RM680_RS10500;Dbxref=GenBank:WP_001832072.1;Name=WP_001832072.1;gbkey=CDS;gene=hypR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475548.1;locus_tag=RM680_RS10500;product=redox-sensitive transcriptional regulator HypR;protein_id=WP_001832072.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	20696	22027	.	+	.	ID=gene-RM680_RS10505;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=RM680_RS10505;old_locus_tag=RM680_10525
NZ_JAVRJI010000015.1	Protein Homology	CDS	20696	22027	.	+	0	ID=cds-WP_002456011.1;Parent=gene-RM680_RS10505;Dbxref=GenBank:WP_002456011.1;Name=WP_002456011.1;Ontology_term=GO:0016668,GO:0050660;gbkey=CDS;gene=merA;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456011.1;locus_tag=RM680_RS10505;product=hypothiocyanous acid reductase MerA;protein_id=WP_002456011.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	22416	22757	.	-	.	ID=gene-RM680_RS10510;Name=RM680_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10510;old_locus_tag=RM680_10530
NZ_JAVRJI010000015.1	Protein Homology	CDS	22416	22757	.	-	0	ID=cds-WP_002438738.1;Parent=gene-RM680_RS10510;Dbxref=GenBank:WP_002438738.1;Name=WP_002438738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499147.1;locus_tag=RM680_RS10510;product=DUF1450 domain-containing protein;protein_id=WP_002438738.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	22968	24044	.	-	.	ID=gene-RM680_RS10515;Name=RM680_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10515;old_locus_tag=RM680_10535
NZ_JAVRJI010000015.1	Protein Homology	CDS	22968	24044	.	-	0	ID=cds-WP_001832075.1;Parent=gene-RM680_RS10515;Dbxref=GenBank:WP_001832075.1;Name=WP_001832075.1;Ontology_term=GO:0016126,GO:0019287,GO:0004631;gbkey=CDS;go_function=phosphomevalonate kinase activity|0004631||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499146.1;locus_tag=RM680_RS10515;product=phosphomevalonate kinase;protein_id=WP_001832075.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	24057	25040	.	-	.	ID=gene-RM680_RS10520;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=RM680_RS10520;old_locus_tag=RM680_10540
NZ_JAVRJI010000015.1	Protein Homology	CDS	24057	25040	.	-	0	ID=cds-WP_002469363.1;Parent=gene-RM680_RS10520;Dbxref=GenBank:WP_002469363.1;Name=WP_002469363.1;Ontology_term=GO:0019287,GO:0004163,GO:0005829;gbkey=CDS;gene=mvaD;go_component=cytosol|0005829||IEA;go_function=diphosphomevalonate decarboxylase activity|0004163||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469363.1;locus_tag=RM680_RS10520;product=diphosphomevalonate decarboxylase;protein_id=WP_002469363.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	25045	25965	.	-	.	ID=gene-RM680_RS10525;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=RM680_RS10525;old_locus_tag=RM680_10545
NZ_JAVRJI010000015.1	Protein Homology	CDS	25045	25965	.	-	0	ID=cds-WP_002445774.1;Parent=gene-RM680_RS10525;Dbxref=GenBank:WP_002445774.1;Name=WP_002445774.1;Ontology_term=GO:0016126,GO:0019287,GO:0004496,GO:0005524,GO:0005737;gbkey=CDS;gene=mvk;go_component=cytoplasm|0005737||IEA;go_function=mevalonate kinase activity|0004496||IEA,ATP binding|0005524||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499144.1;locus_tag=RM680_RS10525;product=mevalonate kinase;protein_id=WP_002445774.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	26658	27497	.	-	.	ID=gene-RM680_RS10530;Name=RM680_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10530;old_locus_tag=RM680_10550
NZ_JAVRJI010000015.1	Protein Homology	CDS	26658	27497	.	-	0	ID=cds-WP_002445773.1;Parent=gene-RM680_RS10530;Dbxref=GenBank:WP_002445773.1;Name=WP_002445773.1;Ontology_term=GO:0009107,GO:0009249;gbkey=CDS;go_process=lipoate biosynthetic process|0009107||IEA,protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834666.1;locus_tag=RM680_RS10530;product=lipoate--protein ligase family protein;protein_id=WP_002445773.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	27497	28486	.	-	.	ID=gene-RM680_RS10535;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=RM680_RS10535;old_locus_tag=RM680_10555
NZ_JAVRJI010000015.1	Protein Homology	CDS	27497	28486	.	-	0	ID=cds-WP_002445772.1;Parent=gene-RM680_RS10535;Dbxref=GenBank:WP_002445772.1;Name=WP_002445772.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499142.1;locus_tag=RM680_RS10535;product=phosphate acetyltransferase;protein_id=WP_002445772.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	28657	29406	.	+	.	ID=gene-RM680_RS10540;Name=hemQ;gbkey=Gene;gene=hemQ;gene_biotype=protein_coding;locus_tag=RM680_RS10540;old_locus_tag=RM680_10560
NZ_JAVRJI010000015.1	Protein Homology	CDS	28657	29406	.	+	0	ID=cds-WP_001832113.1;Parent=gene-RM680_RS10540;Dbxref=GenBank:WP_001832113.1;Name=WP_001832113.1;Ontology_term=GO:0006785,GO:0004601;gbkey=CDS;gene=hemQ;go_function=peroxidase activity|0004601||IEA;go_process=heme B biosynthetic process|0006785||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503939.1;locus_tag=RM680_RS10540;product=hydrogen peroxide-dependent heme synthase;protein_id=WP_001832113.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	29908	30672	.	+	.	ID=gene-RM680_RS10545;Name=RM680_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10545;old_locus_tag=RM680_10565
NZ_JAVRJI010000015.1	Protein Homology	CDS	29908	30672	.	+	0	ID=cds-WP_001832039.1;Parent=gene-RM680_RS10545;Dbxref=GenBank:WP_001832039.1;Name=WP_001832039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360806.1;locus_tag=RM680_RS10545;product=threonine/serine exporter family protein;protein_id=WP_001832039.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	30685	31137	.	+	.	ID=gene-RM680_RS10550;Name=RM680_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10550;old_locus_tag=RM680_10570
NZ_JAVRJI010000015.1	Protein Homology	CDS	30685	31137	.	+	0	ID=cds-WP_001832133.1;Parent=gene-RM680_RS10550;Dbxref=GenBank:WP_001832133.1;Name=WP_001832133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499139.1;locus_tag=RM680_RS10550;product=threonine/serine exporter family protein;protein_id=WP_001832133.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	31499	31654	.	+	.	ID=gene-RM680_RS10555;Name=RM680_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10555;old_locus_tag=RM680_10575
NZ_JAVRJI010000015.1	GeneMarkS-2+	CDS	31499	31654	.	+	0	ID=cds-WP_002470762.1;Parent=gene-RM680_RS10555;Dbxref=GenBank:WP_002470762.1;Name=WP_002470762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS10555;product=hypothetical protein;protein_id=WP_002470762.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	31808	33298	.	-	.	ID=gene-RM680_RS10560;Name=RM680_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10560;old_locus_tag=RM680_10580
NZ_JAVRJI010000015.1	Protein Homology	CDS	31808	33298	.	-	0	ID=cds-WP_001832531.1;Parent=gene-RM680_RS10560;Dbxref=GenBank:WP_001832531.1;Name=WP_001832531.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834667.1;locus_tag=RM680_RS10560;product=APC family permease;protein_id=WP_001832531.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	33414	33782	.	-	.	ID=gene-RM680_RS10565;Name=RM680_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10565;old_locus_tag=RM680_10585
NZ_JAVRJI010000015.1	Protein Homology	CDS	33414	33782	.	-	0	ID=cds-WP_311563613.1;Parent=gene-RM680_RS10565;Dbxref=GenBank:WP_311563613.1;Name=WP_311563613.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499137.1;locus_tag=RM680_RS10565;product=DUF423 domain-containing protein;protein_id=WP_311563613.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	33807	34166	.	-	.	ID=gene-RM680_RS10570;Name=RM680_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10570;old_locus_tag=RM680_10590
NZ_JAVRJI010000015.1	Protein Homology	CDS	33807	34166	.	-	0	ID=cds-WP_001832078.1;Parent=gene-RM680_RS10570;Dbxref=GenBank:WP_001832078.1;Name=WP_001832078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832078.1;locus_tag=RM680_RS10570;product=DUF5327 family protein;protein_id=WP_001832078.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	34176	34826	.	-	.	ID=gene-RM680_RS10575;Name=RM680_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10575;old_locus_tag=RM680_10595
NZ_JAVRJI010000015.1	Protein Homology	CDS	34176	34826	.	-	0	ID=cds-WP_001832132.1;Parent=gene-RM680_RS10575;Dbxref=GenBank:WP_001832132.1;Name=WP_001832132.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456854.1;locus_tag=RM680_RS10575;product=uracil-DNA glycosylase;protein_id=WP_001832132.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	34993	35973	.	+	.	ID=gene-RM680_RS10580;Name=RM680_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10580;old_locus_tag=RM680_10600
NZ_JAVRJI010000015.1	Protein Homology	CDS	34993	35973	.	+	0	ID=cds-WP_002438731.1;Parent=gene-RM680_RS10580;Dbxref=GenBank:WP_002438731.1;Name=WP_002438731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438731.1;locus_tag=RM680_RS10580;product=choloylglycine hydrolase family protein;protein_id=WP_002438731.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	36077	36907	.	+	.	ID=gene-RM680_RS10585;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=RM680_RS10585;old_locus_tag=RM680_10605
NZ_JAVRJI010000015.1	Protein Homology	CDS	36077	36907	.	+	0	ID=cds-WP_002495312.1;Parent=gene-RM680_RS10585;Dbxref=GenBank:WP_002495312.1;Name=WP_002495312.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=RM680_RS10585;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_002495312.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	37723	37902	.	+	.	ID=gene-RM680_RS10590;Name=vraX;gbkey=Gene;gene=vraX;gene_biotype=protein_coding;locus_tag=RM680_RS10590;old_locus_tag=RM680_10610
NZ_JAVRJI010000015.1	Protein Homology	CDS	37723	37902	.	+	0	ID=cds-WP_002438726.1;Parent=gene-RM680_RS10590;Dbxref=GenBank:WP_002438726.1;Name=WP_002438726.1;gbkey=CDS;gene=vraX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445763.1;locus_tag=RM680_RS10590;product=C1q-binding complement inhibitor VraX;protein_id=WP_002438726.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	38186	38446	.	-	.	ID=gene-RM680_RS10595;Name=RM680_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10595;old_locus_tag=RM680_10615
NZ_JAVRJI010000015.1	Protein Homology	CDS	38186	38446	.	-	0	ID=cds-WP_001832117.1;Parent=gene-RM680_RS10595;Dbxref=GenBank:WP_001832117.1;Name=WP_001832117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363840.1;locus_tag=RM680_RS10595;product=hypothetical protein;protein_id=WP_001832117.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	38450	38812	.	-	.	ID=gene-RM680_RS10600;Name=RM680_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10600;old_locus_tag=RM680_10620
NZ_JAVRJI010000015.1	Protein Homology	CDS	38450	38812	.	-	0	ID=cds-WP_001832023.1;Parent=gene-RM680_RS10600;Dbxref=GenBank:WP_001832023.1;Name=WP_001832023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475544.1;locus_tag=RM680_RS10600;product=protein VraC;protein_id=WP_001832023.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	38778	39926	.	-	.	ID=gene-RM680_RS10605;Name=RM680_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10605;old_locus_tag=RM680_10625
NZ_JAVRJI010000015.1	Protein Homology	CDS	38778	39926	.	-	0	ID=cds-WP_002484642.1;Parent=gene-RM680_RS10605;Dbxref=GenBank:WP_002484642.1;Name=WP_002484642.1;Ontology_term=GO:0006635,GO:0003988;gbkey=CDS;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113849.1;locus_tag=RM680_RS10605;product=acetyl-CoA C-acyltransferase;protein_id=WP_002484642.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	39929	41302	.	-	.	ID=gene-RM680_RS10610;Name=RM680_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10610;old_locus_tag=RM680_10630
NZ_JAVRJI010000015.1	Protein Homology	CDS	39929	41302	.	-	0	ID=cds-WP_002438725.1;Parent=gene-RM680_RS10610;Dbxref=GenBank:WP_002438725.1;Name=WP_002438725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477529.1;locus_tag=RM680_RS10610;product=long-chain fatty acid--CoA ligase;protein_id=WP_002438725.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	41408	42055	.	-	.	ID=gene-RM680_RS10615;Name=RM680_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10615;old_locus_tag=RM680_10635
NZ_JAVRJI010000015.1	Protein Homology	CDS	41408	42055	.	-	0	ID=cds-WP_002438724.1;Parent=gene-RM680_RS10615;Dbxref=GenBank:WP_002438724.1;Name=WP_002438724.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502017.1;locus_tag=RM680_RS10615;product=HAD family hydrolase;protein_id=WP_002438724.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	42177	42725	.	-	.	ID=gene-RM680_RS10620;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=RM680_RS10620;old_locus_tag=RM680_10640
NZ_JAVRJI010000015.1	Protein Homology	CDS	42177	42725	.	-	0	ID=cds-WP_002484641.1;Parent=gene-RM680_RS10620;Dbxref=GenBank:WP_002484641.1;Name=WP_002484641.1;Ontology_term=GO:1901135,GO:0016853,GO:0043800;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA,6-phospho-3-hexuloisomerase activity|0043800||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362353.1;locus_tag=RM680_RS10620;product=6-phospho-3-hexuloisomerase;protein_id=WP_002484641.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	42727	43359	.	-	.	ID=gene-RM680_RS10625;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=RM680_RS10625;old_locus_tag=RM680_10645
NZ_JAVRJI010000015.1	Protein Homology	CDS	42727	43359	.	-	0	ID=cds-WP_001832167.1;Parent=gene-RM680_RS10625;Dbxref=GenBank:WP_001832167.1;Name=WP_001832167.1;Ontology_term=GO:0005975,GO:0019647,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA,formaldehyde assimilation via ribulose monophosphate cycle|0019647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834869.1;locus_tag=RM680_RS10625;product=3-hexulose-6-phosphate synthase;protein_id=WP_001832167.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	43468	44199	.	-	.	ID=gene-RM680_RS10630;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=RM680_RS10630;old_locus_tag=RM680_10650
NZ_JAVRJI010000015.1	Protein Homology	CDS	43468	44199	.	-	0	ID=cds-WP_001832077.1;Parent=gene-RM680_RS10630;Dbxref=GenBank:WP_001832077.1;Name=WP_001832077.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368285.1;locus_tag=RM680_RS10630;product=glucosamine-6-phosphate deaminase;protein_id=WP_001832077.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	44484	44846	.	+	.	ID=gene-RM680_RS10635;Name=RM680_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10635;old_locus_tag=RM680_10655
NZ_JAVRJI010000015.1	Protein Homology	CDS	44484	44846	.	+	0	ID=cds-WP_002438722.1;Parent=gene-RM680_RS10635;Dbxref=GenBank:WP_002438722.1;Name=WP_002438722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499123.1;locus_tag=RM680_RS10635;product=YojF family protein;protein_id=WP_002438722.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	44862	45527	.	+	.	ID=gene-RM680_RS10640;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=RM680_RS10640;old_locus_tag=RM680_10660
NZ_JAVRJI010000015.1	Protein Homology	CDS	44862	45527	.	+	0	ID=cds-WP_002456851.1;Parent=gene-RM680_RS10640;Dbxref=GenBank:WP_002456851.1;Name=WP_002456851.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB2;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499122.1;locus_tag=RM680_RS10640;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=WP_002456851.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	45541	46419	.	+	.	ID=gene-RM680_RS10645;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=RM680_RS10645;old_locus_tag=RM680_10665
NZ_JAVRJI010000015.1	Protein Homology	CDS	45541	46419	.	+	0	ID=cds-WP_001832035.1;Parent=gene-RM680_RS10645;Dbxref=GenBank:WP_001832035.1;Name=WP_001832035.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445753.1;locus_tag=RM680_RS10645;product=GTP cyclohydrolase FolE2;protein_id=WP_001832035.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	pseudogene	46848	47583	.	+	.	ID=gene-RM680_RS10650;Name=RM680_RS10650;end_range=47583,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS10650;old_locus_tag=RM680_10670;partial=true;pseudo=true
NZ_JAVRJI010000015.1	Protein Homology	CDS	46848	47583	.	+	0	ID=cds-RM680_RS10650;Parent=gene-RM680_RS10650;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015700,GO:0015105,GO:0016020;end_range=47583,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175595.1;locus_tag=RM680_RS10650;partial=true;product=ArsB/NhaD family transporter;pseudo=true;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	pseudogene	47586	47789	.	+	.	ID=gene-RM680_RS10655;Name=RM680_RS10655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS10655;old_locus_tag=RM680_10675;partial=true;pseudo=true;start_range=.,47586
NZ_JAVRJI010000015.1	Protein Homology	CDS	47586	47789	.	+	0	ID=cds-RM680_RS10655;Parent=gene-RM680_RS10655;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465221.1;locus_tag=RM680_RS10655;partial=true;product=arsenate reductase/protein-tyrosine-phosphatase family protein;pseudo=true;start_range=.,47586;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	gene	48161	49663	.	+	.	ID=gene-RM680_RS10660;Name=RM680_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10660;old_locus_tag=RM680_10680
NZ_JAVRJI010000015.1	Protein Homology	CDS	48161	49663	.	+	0	ID=cds-WP_002484645.1;Parent=gene-RM680_RS10660;Dbxref=GenBank:WP_002484645.1;Name=WP_002484645.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832532.1;locus_tag=RM680_RS10660;product=glycosyltransferase;protein_id=WP_002484645.1;transl_table=11
NZ_JAVRJI010000015.1	RefSeq	pseudogene	50032	50625	.	-	.	ID=gene-RM680_RS10665;Name=RM680_RS10665;end_range=50625,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS10665;old_locus_tag=RM680_10685;partial=true;pseudo=true
NZ_JAVRJI010000015.1	Protein Homology	CDS	50032	50625	.	-	0	ID=cds-RM680_RS10665;Parent=gene-RM680_RS10665;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=50625,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012948.6;locus_tag=RM680_RS10665;partial=true;product=MSCRAMM family adhesin SdrE;pseudo=true;transl_table=11
##sequence-region NZ_JAVRJI010000016.1 1 50462
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000016.1	RefSeq	region	1	50462	.	+	.	ID=NZ_JAVRJI010000016.1:1..50462;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000016.1	RefSeq	gene	159	605	.	-	.	ID=gene-RM680_RS10670;Name=RM680_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10670;old_locus_tag=RM680_10690
NZ_JAVRJI010000016.1	Protein Homology	CDS	159	605	.	-	0	ID=cds-WP_001831825.1;Parent=gene-RM680_RS10670;Dbxref=GenBank:WP_001831825.1;Name=WP_001831825.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446968.1;locus_tag=RM680_RS10670;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_001831825.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	777	2426	.	+	.	ID=gene-RM680_RS10675;Name=RM680_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10675;old_locus_tag=RM680_10695
NZ_JAVRJI010000016.1	Protein Homology	CDS	777	2426	.	+	0	ID=cds-WP_002456741.1;Parent=gene-RM680_RS10675;Dbxref=GenBank:WP_002456741.1;Name=WP_002456741.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446967.1;locus_tag=RM680_RS10675;product=alpha-keto acid decarboxylase family protein;protein_id=WP_002456741.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	2773	3939	.	-	.	ID=gene-RM680_RS10680;Name=RM680_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10680;old_locus_tag=RM680_10700
NZ_JAVRJI010000016.1	Protein Homology	CDS	2773	3939	.	-	0	ID=cds-WP_002486089.1;Parent=gene-RM680_RS10680;Dbxref=GenBank:WP_002486089.1;Name=WP_002486089.1;Ontology_term=GO:0045227,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497783.1;locus_tag=RM680_RS10680;product=CapA family protein;protein_id=WP_002486089.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	4193	4951	.	-	.	ID=gene-RM680_RS10685;Name=RM680_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10685;old_locus_tag=RM680_10705
NZ_JAVRJI010000016.1	Protein Homology	CDS	4193	4951	.	-	0	ID=cds-WP_002469038.1;Parent=gene-RM680_RS10685;Dbxref=GenBank:WP_002469038.1;Name=WP_002469038.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458330.1;locus_tag=RM680_RS10685;product=alpha/beta hydrolase;protein_id=WP_002469038.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	5243	5929	.	-	.	ID=gene-RM680_RS10690;Name=RM680_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10690;old_locus_tag=RM680_10710
NZ_JAVRJI010000016.1	Protein Homology	CDS	5243	5929	.	-	0	ID=cds-WP_002486086.1;Parent=gene-RM680_RS10690;Dbxref=GenBank:WP_002486086.1;Name=WP_002486086.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437943.1;locus_tag=RM680_RS10690;product=Crp/Fnr family transcriptional regulator;protein_id=WP_002486086.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	6160	7563	.	-	.	ID=gene-RM680_RS10695;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=RM680_RS10695;old_locus_tag=RM680_10715
NZ_JAVRJI010000016.1	Protein Homology	CDS	6160	7563	.	-	0	ID=cds-WP_020368195.1;Parent=gene-RM680_RS10695;Dbxref=GenBank:WP_020368195.1;Name=WP_020368195.1;Ontology_term=GO:0006527,GO:1903826,GO:0043858,GO:0005886;gbkey=CDS;gene=arcD;go_component=plasma membrane|0005886||IEA;go_function=arginine:ornithine antiporter activity|0043858||IEA;go_process=L-arginine catabolic process|0006527||IEA,L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495989.1;locus_tag=RM680_RS10695;product=arginine-ornithine antiporter;protein_id=WP_020368195.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	7828	8835	.	-	.	ID=gene-RM680_RS10700;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=RM680_RS10700;old_locus_tag=RM680_10720
NZ_JAVRJI010000016.1	Protein Homology	CDS	7828	8835	.	-	0	ID=cds-WP_002467833.1;Parent=gene-RM680_RS10700;Dbxref=GenBank:WP_002467833.1;Name=WP_002467833.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831886.1;locus_tag=RM680_RS10700;product=ornithine carbamoyltransferase;protein_id=WP_002467833.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	8940	10175	.	-	.	ID=gene-RM680_RS10705;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=RM680_RS10705;old_locus_tag=RM680_10725
NZ_JAVRJI010000016.1	Protein Homology	CDS	8940	10175	.	-	0	ID=cds-WP_002437936.1;Parent=gene-RM680_RS10705;Dbxref=GenBank:WP_002437936.1;Name=WP_002437936.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501419.1;locus_tag=RM680_RS10705;product=arginine deiminase;protein_id=WP_002437936.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	10514	10975	.	-	.	ID=gene-RM680_RS10710;Name=RM680_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10710;old_locus_tag=RM680_10730
NZ_JAVRJI010000016.1	Protein Homology	CDS	10514	10975	.	-	0	ID=cds-WP_001831858.1;Parent=gene-RM680_RS10710;Dbxref=GenBank:WP_001831858.1;Name=WP_001831858.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501868.1;locus_tag=RM680_RS10710;product=arginine repressor;protein_id=WP_001831858.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	11489	13012	.	-	.	ID=gene-RM680_RS10715;Name=RM680_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10715;old_locus_tag=RM680_10735
NZ_JAVRJI010000016.1	Protein Homology	CDS	11489	13012	.	-	0	ID=cds-WP_020368194.1;Parent=gene-RM680_RS10715;Dbxref=GenBank:WP_020368194.1;Name=WP_020368194.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456744.1;locus_tag=RM680_RS10715;product=M4 family metallopeptidase;protein_id=WP_020368194.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	13499	14737	.	-	.	ID=gene-RM680_RS10720;Name=RM680_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10720;old_locus_tag=RM680_10740
NZ_JAVRJI010000016.1	Protein Homology	CDS	13499	14737	.	-	0	ID=cds-WP_020368332.1;Parent=gene-RM680_RS10720;Dbxref=GenBank:WP_020368332.1;Name=WP_020368332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493784.1;locus_tag=RM680_RS10720;product=ArgE/DapE family deacylase;protein_id=WP_020368332.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	15076	15576	.	+	.	ID=gene-RM680_RS10725;Name=RM680_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10725;old_locus_tag=RM680_10745
NZ_JAVRJI010000016.1	Protein Homology	CDS	15076	15576	.	+	0	ID=cds-WP_002437921.1;Parent=gene-RM680_RS10725;Dbxref=GenBank:WP_002437921.1;Name=WP_002437921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831854.1;locus_tag=RM680_RS10725;product=hypothetical protein;protein_id=WP_002437921.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	15781	16695	.	+	.	ID=gene-RM680_RS10730;Name=RM680_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10730;old_locus_tag=RM680_10750
NZ_JAVRJI010000016.1	Protein Homology	CDS	15781	16695	.	+	0	ID=cds-WP_002470706.1;Parent=gene-RM680_RS10730;Dbxref=GenBank:WP_002470706.1;Name=WP_002470706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456747.1;locus_tag=RM680_RS10730;product=DUF1672 domain-containing protein;protein_id=WP_002470706.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	pseudogene	16688	18837	.	+	.	ID=gene-RM680_RS10735;Name=RM680_RS10735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS10735;old_locus_tag=RM680_10755;pseudo=true
NZ_JAVRJI010000016.1	Protein Homology	CDS	16688	18837	.	+	0	ID=cds-RM680_RS10735;Parent=gene-RM680_RS10735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503253.1;locus_tag=RM680_RS10735;product=hypothetical protein;pseudo=true;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	19282	20061	.	-	.	ID=gene-RM680_RS10740;Name=RM680_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10740;old_locus_tag=RM680_10760
NZ_JAVRJI010000016.1	Protein Homology	CDS	19282	20061	.	-	0	ID=cds-WP_001831826.1;Parent=gene-RM680_RS10740;Dbxref=GenBank:WP_001831826.1;Name=WP_001831826.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase (NAD+) activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458838.1;locus_tag=RM680_RS10740;product=(S)-acetoin forming diacetyl reductase;protein_id=WP_001831826.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	20360	20494	.	+	.	ID=gene-RM680_RS10745;Name=RM680_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10745;old_locus_tag=RM680_10765
NZ_JAVRJI010000016.1	Protein Homology	CDS	20360	20494	.	+	0	ID=cds-WP_001831873.1;Parent=gene-RM680_RS10745;Dbxref=GenBank:WP_001831873.1;Name=WP_001831873.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017308.6;locus_tag=RM680_RS10745;product=beta-class phenol-soluble modulin;protein_id=WP_001831873.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	20812	22683	.	+	.	ID=gene-RM680_RS10750;Name=RM680_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10750;old_locus_tag=RM680_10770
NZ_JAVRJI010000016.1	Protein Homology	CDS	20812	22683	.	+	0	ID=cds-WP_002437911.1;Parent=gene-RM680_RS10750;Dbxref=GenBank:WP_002437911.1;Name=WP_002437911.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505841.1;locus_tag=RM680_RS10750;product=BglG family transcription antiterminator;protein_id=WP_002437911.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	22768	24708	.	+	.	ID=gene-RM680_RS10755;Name=RM680_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10755;old_locus_tag=RM680_10775
NZ_JAVRJI010000016.1	Protein Homology	CDS	22768	24708	.	+	0	ID=cds-WP_311563615.1;Parent=gene-RM680_RS10755;Dbxref=GenBank:WP_311563615.1;Name=WP_311563615.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458339.1;locus_tag=RM680_RS10755;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_311563615.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	24724	25677	.	+	.	ID=gene-RM680_RS10760;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=RM680_RS10760;old_locus_tag=RM680_10780
NZ_JAVRJI010000016.1	Protein Homology	CDS	24724	25677	.	+	0	ID=cds-WP_311563617.1;Parent=gene-RM680_RS10760;Dbxref=GenBank:WP_311563617.1;Name=WP_311563617.1;Ontology_term=GO:0005975,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505843.1;locus_tag=RM680_RS10760;product=mannose-6-phosphate isomerase%2C class I;protein_id=WP_311563617.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	25988	28846	.	-	.	ID=gene-RM680_RS10765;Name=RM680_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10765;old_locus_tag=RM680_10785
NZ_JAVRJI010000016.1	Protein Homology	CDS	25988	28846	.	-	0	ID=cds-WP_001831884.1;Parent=gene-RM680_RS10765;Dbxref=GenBank:WP_001831884.1;Name=WP_001831884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834639.1;locus_tag=RM680_RS10765;product=YhgE/Pip domain-containing protein;protein_id=WP_001831884.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	29134	31101	.	+	.	ID=gene-RM680_RS10770;Name=RM680_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10770;old_locus_tag=RM680_10790
NZ_JAVRJI010000016.1	Protein Homology	CDS	29134	31101	.	+	0	ID=cds-WP_001831881.1;Parent=gene-RM680_RS10770;Dbxref=GenBank:WP_001831881.1;Name=WP_001831881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477232.1;locus_tag=RM680_RS10770;product=amidase domain-containing protein;protein_id=WP_001831881.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	31469	33499	.	-	.	ID=gene-RM680_RS10775;Name=RM680_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10775;old_locus_tag=RM680_10795
NZ_JAVRJI010000016.1	Protein Homology	CDS	31469	33499	.	-	0	ID=cds-WP_001831890.1;Parent=gene-RM680_RS10775;Dbxref=GenBank:WP_001831890.1;Name=WP_001831890.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511277.1;locus_tag=RM680_RS10775;product=LPXTG cell wall anchor domain-containing protein;protein_id=WP_001831890.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	33749	34177	.	+	.	ID=gene-RM680_RS10780;Name=RM680_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10780;old_locus_tag=RM680_10800
NZ_JAVRJI010000016.1	Protein Homology	CDS	33749	34177	.	+	0	ID=cds-WP_001831844.1;Parent=gene-RM680_RS10780;Dbxref=GenBank:WP_001831844.1;Name=WP_001831844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473994.1;locus_tag=RM680_RS10780;product=organic hydroperoxide resistance protein;protein_id=WP_001831844.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	34491	34667	.	+	.	ID=gene-RM680_RS10785;Name=RM680_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10785;old_locus_tag=RM680_10805
NZ_JAVRJI010000016.1	Protein Homology	CDS	34491	34667	.	+	0	ID=cds-WP_001831885.1;Parent=gene-RM680_RS10785;Dbxref=GenBank:WP_001831885.1;Name=WP_001831885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477234.1;locus_tag=RM680_RS10785;product=hypothetical protein;protein_id=WP_001831885.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	34866	35021	.	-	.	ID=gene-RM680_RS10790;Name=RM680_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10790;old_locus_tag=RM680_10810
NZ_JAVRJI010000016.1	GeneMarkS-2+	CDS	34866	35021	.	-	0	ID=cds-WP_001831859.1;Parent=gene-RM680_RS10790;Dbxref=GenBank:WP_001831859.1;Name=WP_001831859.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS10790;product=hypothetical protein;protein_id=WP_001831859.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	35416	36105	.	-	.	ID=gene-RM680_RS10795;Name=RM680_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10795;old_locus_tag=RM680_10815
NZ_JAVRJI010000016.1	Protein Homology	CDS	35416	36105	.	-	0	ID=cds-WP_002468475.1;Parent=gene-RM680_RS10795;Dbxref=GenBank:WP_002468475.1;Name=WP_002468475.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468475.1;locus_tag=RM680_RS10795;product=flavin reductase family protein;protein_id=WP_002468475.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	36267	37439	.	-	.	ID=gene-RM680_RS10800;Name=RM680_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10800;old_locus_tag=RM680_10820
NZ_JAVRJI010000016.1	Protein Homology	CDS	36267	37439	.	-	0	ID=cds-WP_001831878.1;Parent=gene-RM680_RS10800;Dbxref=GenBank:WP_001831878.1;Name=WP_001831878.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831878.1;locus_tag=RM680_RS10800;product=MFS transporter;protein_id=WP_001831878.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	37780	38136	.	+	.	ID=gene-RM680_RS10805;Name=RM680_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10805;old_locus_tag=RM680_10825
NZ_JAVRJI010000016.1	Protein Homology	CDS	37780	38136	.	+	0	ID=cds-WP_001831851.1;Parent=gene-RM680_RS10805;Dbxref=GenBank:WP_001831851.1;Name=WP_001831851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437887.1;locus_tag=RM680_RS10805;product=hypothetical protein;protein_id=WP_001831851.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	38282	38761	.	-	.	ID=gene-RM680_RS10810;Name=RM680_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10810;old_locus_tag=RM680_10830
NZ_JAVRJI010000016.1	Protein Homology	CDS	38282	38761	.	-	0	ID=cds-WP_001831852.1;Parent=gene-RM680_RS10810;Dbxref=GenBank:WP_001831852.1;Name=WP_001831852.1;Ontology_term=GO:0008113;gbkey=CDS;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473206.1;locus_tag=RM680_RS10810;product=peptide-methionine (S)-S-oxide reductase;protein_id=WP_001831852.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	38931	39278	.	-	.	ID=gene-RM680_RS10815;Name=RM680_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10815;old_locus_tag=RM680_10835
NZ_JAVRJI010000016.1	Protein Homology	CDS	38931	39278	.	-	0	ID=cds-WP_001831842.1;Parent=gene-RM680_RS10815;Dbxref=GenBank:WP_001831842.1;Name=WP_001831842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473211.1;locus_tag=RM680_RS10815;product=membrane protein;protein_id=WP_001831842.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	39384	40724	.	-	.	ID=gene-RM680_RS10820;Name=gtfB;gbkey=Gene;gene=gtfB;gene_biotype=protein_coding;locus_tag=RM680_RS10820;old_locus_tag=RM680_10840
NZ_JAVRJI010000016.1	Protein Homology	CDS	39384	40724	.	-	0	ID=cds-WP_001831861.1;Parent=gene-RM680_RS10820;Dbxref=GenBank:WP_001831861.1;Name=WP_001831861.1;Ontology_term=GO:0031647;gbkey=CDS;gene=gtfB;go_process=regulation of protein stability|0031647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368578.1;locus_tag=RM680_RS10820;product=accessory Sec system glycosylation chaperone GtfB;protein_id=WP_001831861.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	40717	42225	.	-	.	ID=gene-RM680_RS10825;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=RM680_RS10825;old_locus_tag=RM680_10845
NZ_JAVRJI010000016.1	Protein Homology	CDS	40717	42225	.	-	0	ID=cds-WP_001831876.1;Parent=gene-RM680_RS10825;Dbxref=GenBank:WP_001831876.1;Name=WP_001831876.1;Ontology_term=GO:0016757;gbkey=CDS;gene=gtfA;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959330.1;locus_tag=RM680_RS10825;product=accessory Sec system glycosyltransferase GtfA;protein_id=WP_001831876.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	42243	44633	.	-	.	ID=gene-RM680_RS10830;Name=secA2;gbkey=Gene;gene=secA2;gene_biotype=protein_coding;locus_tag=RM680_RS10830;old_locus_tag=RM680_10850
NZ_JAVRJI010000016.1	Protein Homology	CDS	42243	44633	.	-	0	ID=cds-WP_001832960.1;Parent=gene-RM680_RS10830;Dbxref=GenBank:WP_001832960.1;Name=WP_001832960.1;Ontology_term=GO:0015031,GO:0015450;gbkey=CDS;gene=secA2;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437880.1;locus_tag=RM680_RS10830;product=accessory Sec system translocase SecA2;protein_id=WP_001832960.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	44626	45198	.	-	.	ID=gene-RM680_RS10835;Name=asp3;gbkey=Gene;gene=asp3;gene_biotype=protein_coding;locus_tag=RM680_RS10835;old_locus_tag=RM680_10855
NZ_JAVRJI010000016.1	Protein Homology	CDS	44626	45198	.	-	0	ID=cds-WP_001832956.1;Parent=gene-RM680_RS10835;Dbxref=GenBank:WP_001832956.1;Name=WP_001832956.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp3;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437878.1;locus_tag=RM680_RS10835;product=accessory Sec system protein Asp3;protein_id=WP_001832956.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	45185	46753	.	-	.	ID=gene-RM680_RS10840;Name=asp2;gbkey=Gene;gene=asp2;gene_biotype=protein_coding;locus_tag=RM680_RS10840;old_locus_tag=RM680_10860
NZ_JAVRJI010000016.1	Protein Homology	CDS	45185	46753	.	-	0	ID=cds-WP_172643077.1;Parent=gene-RM680_RS10840;Dbxref=GenBank:WP_172643077.1;Name=WP_172643077.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360698.1;locus_tag=RM680_RS10840;product=accessory Sec system protein Asp2;protein_id=WP_172643077.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	46734	48290	.	-	.	ID=gene-RM680_RS10845;Name=asp1;gbkey=Gene;gene=asp1;gene_biotype=protein_coding;locus_tag=RM680_RS10845;old_locus_tag=RM680_10865
NZ_JAVRJI010000016.1	Protein Homology	CDS	46734	48290	.	-	0	ID=cds-WP_001831836.1;Parent=gene-RM680_RS10845;Dbxref=GenBank:WP_001831836.1;Name=WP_001831836.1;Ontology_term=GO:0006886;gbkey=CDS;gene=asp1;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493770.1;locus_tag=RM680_RS10845;product=accessory Sec system protein Asp1;protein_id=WP_001831836.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	gene	48308	49507	.	-	.	ID=gene-RM680_RS10850;Name=secY2;gbkey=Gene;gene=secY2;gene_biotype=protein_coding;locus_tag=RM680_RS10850;old_locus_tag=RM680_10870
NZ_JAVRJI010000016.1	Protein Homology	CDS	48308	49507	.	-	0	ID=cds-WP_001831846.1;Parent=gene-RM680_RS10850;Dbxref=GenBank:WP_001831846.1;Name=WP_001831846.1;Ontology_term=GO:0006886;gbkey=CDS;gene=secY2;go_process=intracellular protein transport|0006886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477246.1;locus_tag=RM680_RS10850;product=accessory Sec system protein translocase subunit SecY2;protein_id=WP_001831846.1;transl_table=11
NZ_JAVRJI010000016.1	RefSeq	pseudogene	49650	50462	.	-	.	ID=gene-RM680_RS12060;Name=RM680_RS12060;end_range=50462,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS12060;partial=true;pseudo=true
NZ_JAVRJI010000016.1	Protein Homology	CDS	49650	50462	.	-	0	ID=cds-RM680_RS12060;Parent=gene-RM680_RS12060;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=50462,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497694.1;locus_tag=RM680_RS12060;partial=true;product=adhesin;pseudo=true;transl_table=11
##sequence-region NZ_JAVRJI010000017.1 1 41112
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000017.1	RefSeq	region	1	41112	.	+	.	ID=NZ_JAVRJI010000017.1:1..41112;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000017.1	RefSeq	pseudogene	1	187	.	+	.	ID=gene-RM680_RS10865;Name=RM680_RS10865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS10865;old_locus_tag=RM680_10885;partial=true;pseudo=true;start_range=.,1
NZ_JAVRJI010000017.1	GeneMarkS-2+	CDS	1	187	.	+	1	ID=cds-RM680_RS10865;Parent=gene-RM680_RS10865;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS10865;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	pseudogene	263	638	.	+	.	ID=gene-RM680_RS10870;Name=RM680_RS10870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS10870;old_locus_tag=RM680_10890;partial=true;pseudo=true;start_range=.,263
NZ_JAVRJI010000017.1	Protein Homology	CDS	263	638	.	+	0	ID=cds-RM680_RS10870;Parent=gene-RM680_RS10870;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082549.1;locus_tag=RM680_RS10870;partial=true;product=transposase;pseudo=true;start_range=.,263;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	657	812	.	-	.	ID=gene-RM680_RS10875;Name=RM680_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10875;old_locus_tag=RM680_10895
NZ_JAVRJI010000017.1	Protein Homology	CDS	657	812	.	-	0	ID=cds-WP_002439348.1;Parent=gene-RM680_RS10875;Dbxref=GenBank:WP_002439348.1;Name=WP_002439348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439348.1;locus_tag=RM680_RS10875;product=DUF2197 domain-containing protein;protein_id=WP_002439348.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	814	1296	.	-	.	ID=gene-RM680_RS10880;Name=RM680_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10880;old_locus_tag=RM680_10900
NZ_JAVRJI010000017.1	Protein Homology	CDS	814	1296	.	-	0	ID=cds-WP_002456607.1;Parent=gene-RM680_RS10880;Dbxref=GenBank:WP_002456607.1;Name=WP_002456607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473266.1;locus_tag=RM680_RS10880;product=hypothetical protein;protein_id=WP_002456607.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	1441	1716	.	+	.	ID=gene-RM680_RS10885;Name=RM680_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10885;old_locus_tag=RM680_10905
NZ_JAVRJI010000017.1	Protein Homology	CDS	1441	1716	.	+	0	ID=cds-WP_001830079.1;Parent=gene-RM680_RS10885;Dbxref=GenBank:WP_001830079.1;Name=WP_001830079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830079.1;locus_tag=RM680_RS10885;product=YlaN family protein;protein_id=WP_001830079.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	2118	3341	.	+	.	ID=gene-RM680_RS10890;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=RM680_RS10890;old_locus_tag=RM680_10910
NZ_JAVRJI010000017.1	Protein Homology	CDS	2118	3341	.	+	0	ID=cds-WP_002489407.1;Parent=gene-RM680_RS10890;Dbxref=GenBank:WP_002489407.1;Name=WP_002489407.1;gbkey=CDS;gene=ftsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473270.1;locus_tag=RM680_RS10890;product=cell division peptidoglycan polymerase FtsW;protein_id=WP_002489407.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	3743	7192	.	+	.	ID=gene-RM680_RS10895;Name=RM680_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10895;old_locus_tag=RM680_10915
NZ_JAVRJI010000017.1	Protein Homology	CDS	3743	7192	.	+	0	ID=cds-WP_002470251.1;Parent=gene-RM680_RS10895;Dbxref=GenBank:WP_002470251.1;Name=WP_002470251.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470251.1;locus_tag=RM680_RS10895;product=pyruvate carboxylase;protein_id=WP_002470251.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	7335	8243	.	-	.	ID=gene-RM680_RS10900;Name=RM680_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10900;old_locus_tag=RM680_10920
NZ_JAVRJI010000017.1	Protein Homology	CDS	7335	8243	.	-	0	ID=cds-WP_001830131.1;Parent=gene-RM680_RS10900;Dbxref=GenBank:WP_001830131.1;Name=WP_001830131.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464280.1;locus_tag=RM680_RS10900;product=COX15/CtaA family protein;protein_id=WP_001830131.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	8544	9455	.	+	.	ID=gene-RM680_RS10905;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=RM680_RS10905;old_locus_tag=RM680_10925
NZ_JAVRJI010000017.1	Protein Homology	CDS	8544	9455	.	+	0	ID=cds-WP_002469568.1;Parent=gene-RM680_RS10905;Dbxref=GenBank:WP_002469568.1;Name=WP_002469568.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499612.1;locus_tag=RM680_RS10905;product=heme o synthase;protein_id=WP_002469568.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	9481	9942	.	+	.	ID=gene-RM680_RS10910;Name=RM680_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10910;old_locus_tag=RM680_10930
NZ_JAVRJI010000017.1	Protein Homology	CDS	9481	9942	.	+	0	ID=cds-WP_001830117.1;Parent=gene-RM680_RS10910;Dbxref=GenBank:WP_001830117.1;Name=WP_001830117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457433.1;locus_tag=RM680_RS10910;product=DUF420 domain-containing protein;protein_id=WP_001830117.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	10384	11436	.	+	.	ID=gene-RM680_RS10915;Name=RM680_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10915;old_locus_tag=RM680_10935
NZ_JAVRJI010000017.1	Protein Homology	CDS	10384	11436	.	+	0	ID=cds-WP_001830119.1;Parent=gene-RM680_RS10915;Dbxref=GenBank:WP_001830119.1;Name=WP_001830119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830119.1;locus_tag=RM680_RS10915;product=CAP-associated domain-containing protein;protein_id=WP_001830119.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	11457	11891	.	+	.	ID=gene-RM680_RS10920;Name=RM680_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10920;old_locus_tag=RM680_10940
NZ_JAVRJI010000017.1	Protein Homology	CDS	11457	11891	.	+	0	ID=cds-WP_001830091.1;Parent=gene-RM680_RS10920;Dbxref=GenBank:WP_001830091.1;Name=WP_001830091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830091.1;locus_tag=RM680_RS10920;product=YlbF family regulator;protein_id=WP_001830091.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	12406	13332	.	-	.	ID=gene-RM680_RS10925;Name=RM680_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10925;old_locus_tag=RM680_10945
NZ_JAVRJI010000017.1	Protein Homology	CDS	12406	13332	.	-	0	ID=cds-WP_001830132.1;Parent=gene-RM680_RS10925;Dbxref=GenBank:WP_001830132.1;Name=WP_001830132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464283.1;locus_tag=RM680_RS10925;product=glycerophosphodiester phosphodiesterase;protein_id=WP_001830132.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	13553	13804	.	+	.	ID=gene-RM680_RS10930;Name=RM680_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10930;old_locus_tag=RM680_10950
NZ_JAVRJI010000017.1	Protein Homology	CDS	13553	13804	.	+	0	ID=cds-WP_002439362.1;Parent=gene-RM680_RS10930;Dbxref=GenBank:WP_002439362.1;Name=WP_002439362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439362.1;locus_tag=RM680_RS10930;product=DUF2129 domain-containing protein;protein_id=WP_002439362.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	13814	14203	.	-	.	ID=gene-RM680_RS10935;Name=RM680_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10935;old_locus_tag=RM680_10955
NZ_JAVRJI010000017.1	Protein Homology	CDS	13814	14203	.	-	0	ID=cds-WP_001830114.1;Parent=gene-RM680_RS10935;Dbxref=GenBank:WP_001830114.1;Name=WP_001830114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457429.1;locus_tag=RM680_RS10935;product=DUF7147 family protein;protein_id=WP_001830114.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	14270	14812	.	+	.	ID=gene-RM680_RS10940;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=RM680_RS10940;old_locus_tag=RM680_10960
NZ_JAVRJI010000017.1	Protein Homology	CDS	14270	14812	.	+	0	ID=cds-WP_001830140.1;Parent=gene-RM680_RS10940;Dbxref=GenBank:WP_001830140.1;Name=WP_001830140.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470236.1;locus_tag=RM680_RS10940;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_001830140.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	14814	15299	.	+	.	ID=gene-RM680_RS10945;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=RM680_RS10945;old_locus_tag=RM680_10965
NZ_JAVRJI010000017.1	Protein Homology	CDS	14814	15299	.	+	0	ID=cds-WP_001830072.1;Parent=gene-RM680_RS10945;Dbxref=GenBank:WP_001830072.1;Name=WP_001830072.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498243.1;locus_tag=RM680_RS10945;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_001830072.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	15703	16836	.	-	.	ID=gene-RM680_RS10950;Name=RM680_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10950;old_locus_tag=RM680_10970
NZ_JAVRJI010000017.1	Protein Homology	CDS	15703	16836	.	-	0	ID=cds-WP_001830136.1;Parent=gene-RM680_RS10950;Dbxref=GenBank:WP_001830136.1;Name=WP_001830136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362783.1;locus_tag=RM680_RS10950;product=nucleotidyltransferase;protein_id=WP_001830136.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	16963	17517	.	+	.	ID=gene-RM680_RS10955;Name=RM680_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10955;old_locus_tag=RM680_10975
NZ_JAVRJI010000017.1	Protein Homology	CDS	16963	17517	.	+	0	ID=cds-WP_001830128.1;Parent=gene-RM680_RS10955;Dbxref=GenBank:WP_001830128.1;Name=WP_001830128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499623.1;locus_tag=RM680_RS10955;product=YceD family protein;protein_id=WP_001830128.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	17595	17768	.	+	.	ID=gene-RM680_RS10960;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=RM680_RS10960;old_locus_tag=RM680_10980
NZ_JAVRJI010000017.1	Protein Homology	CDS	17595	17768	.	+	0	ID=cds-WP_001830121.1;Parent=gene-RM680_RS10960;Dbxref=GenBank:WP_001830121.1;Name=WP_001830121.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469283.1;locus_tag=RM680_RS10960;product=50S ribosomal protein L32;protein_id=WP_001830121.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	18248	20695	.	-	.	ID=gene-RM680_RS10965;Name=RM680_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10965;old_locus_tag=RM680_10985
NZ_JAVRJI010000017.1	Protein Homology	CDS	18248	20695	.	-	0	ID=cds-WP_311563618.1;Parent=gene-RM680_RS10965;Dbxref=GenBank:WP_311563618.1;Name=WP_311563618.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485785.1;locus_tag=RM680_RS10965;product=YSIRK-type signal peptide-containing protein;protein_id=WP_311563618.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	21034	21774	.	+	.	ID=gene-RM680_RS10970;Name=RM680_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10970;old_locus_tag=RM680_10990
NZ_JAVRJI010000017.1	Protein Homology	CDS	21034	21774	.	+	0	ID=cds-WP_001830063.1;Parent=gene-RM680_RS10970;Dbxref=GenBank:WP_001830063.1;Name=WP_001830063.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476601.1;locus_tag=RM680_RS10970;product=TrmH family RNA methyltransferase;protein_id=WP_001830063.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	22142	23200	.	+	.	ID=gene-RM680_RS10975;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=RM680_RS10975;old_locus_tag=RM680_10995
NZ_JAVRJI010000017.1	Protein Homology	CDS	22142	23200	.	+	0	ID=cds-WP_020368406.1;Parent=gene-RM680_RS10975;Dbxref=GenBank:WP_020368406.1;Name=WP_020368406.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020367422.1;locus_tag=RM680_RS10975;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_020368406.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	23200	25602	.	+	.	ID=gene-RM680_RS10980;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=RM680_RS10980;old_locus_tag=RM680_11000
NZ_JAVRJI010000017.1	Protein Homology	CDS	23200	25602	.	+	0	ID=cds-WP_002439376.1;Parent=gene-RM680_RS10980;Dbxref=GenBank:WP_002439376.1;Name=WP_002439376.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499638.1;locus_tag=RM680_RS10980;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_002439376.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	25654	26580	.	-	.	ID=gene-RM680_RS10985;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=RM680_RS10985;old_locus_tag=RM680_11005
NZ_JAVRJI010000017.1	Protein Homology	CDS	25654	26580	.	-	0	ID=cds-WP_311563619.1;Parent=gene-RM680_RS10985;Dbxref=GenBank:WP_311563619.1;Name=WP_311563619.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498403.1;locus_tag=RM680_RS10985;product=ribonuclease HIII;protein_id=WP_311563619.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	26834	27100	.	+	.	ID=gene-RM680_RS10990;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=RM680_RS10990;old_locus_tag=RM680_11010
NZ_JAVRJI010000017.1	Protein Homology	CDS	26834	27100	.	+	0	ID=cds-WP_001830081.1;Parent=gene-RM680_RS10990;Dbxref=GenBank:WP_001830081.1;Name=WP_001830081.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830081.1;locus_tag=RM680_RS10990;product=cell division protein ZapA;protein_id=WP_001830081.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	27101	27622	.	+	.	ID=gene-RM680_RS10995;Name=RM680_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS10995;old_locus_tag=RM680_11015
NZ_JAVRJI010000017.1	Protein Homology	CDS	27101	27622	.	+	0	ID=cds-WP_002439383.1;Parent=gene-RM680_RS10995;Dbxref=GenBank:WP_002439383.1;Name=WP_002439383.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830147.1;locus_tag=RM680_RS10995;product=CvpA family protein;protein_id=WP_002439383.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	27697	29406	.	+	.	ID=gene-RM680_RS11000;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=RM680_RS11000;old_locus_tag=RM680_11020
NZ_JAVRJI010000017.1	Protein Homology	CDS	27697	29406	.	+	0	ID=cds-WP_002456232.1;Parent=gene-RM680_RS11000;Dbxref=GenBank:WP_002456232.1;Name=WP_002456232.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499642.1;locus_tag=RM680_RS11000;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_002456232.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	29416	31764	.	+	.	ID=gene-RM680_RS11005;Name=RM680_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11005;old_locus_tag=RM680_11025
NZ_JAVRJI010000017.1	Protein Homology	CDS	29416	31764	.	+	0	ID=cds-WP_002439388.1;Parent=gene-RM680_RS11005;Dbxref=GenBank:WP_002439388.1;Name=WP_002439388.1;Ontology_term=GO:0006259,GO:0045910,GO:0004519,GO:0016887,GO:0030983;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=DNA metabolic process|0006259||IEA,negative regulation of DNA recombination|0045910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499643.1;locus_tag=RM680_RS11005;product=endonuclease MutS2;protein_id=WP_002439388.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	32023	32337	.	+	.	ID=gene-RM680_RS11010;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=RM680_RS11010;old_locus_tag=RM680_11030
NZ_JAVRJI010000017.1	Protein Homology	CDS	32023	32337	.	+	0	ID=cds-WP_001830148.1;Parent=gene-RM680_RS11010;Dbxref=GenBank:WP_001830148.1;Name=WP_001830148.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499644.1;locus_tag=RM680_RS11010;product=thioredoxin;protein_id=WP_001830148.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	32417	34219	.	+	.	ID=gene-RM680_RS11015;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=RM680_RS11015;old_locus_tag=RM680_11035
NZ_JAVRJI010000017.1	Protein Homology	CDS	32417	34219	.	+	0	ID=cds-WP_002439390.1;Parent=gene-RM680_RS11015;Dbxref=GenBank:WP_002439390.1;Name=WP_002439390.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830175.1;locus_tag=RM680_RS11015;product=excinuclease ABC subunit UvrC;protein_id=WP_002439390.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	34251	34445	.	+	.	ID=gene-RM680_RS11020;Name=RM680_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11020;old_locus_tag=RM680_11040
NZ_JAVRJI010000017.1	Protein Homology	CDS	34251	34445	.	+	0	ID=cds-WP_002494433.1;Parent=gene-RM680_RS11020;Dbxref=GenBank:WP_002494433.1;Name=WP_002494433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498399.1;locus_tag=RM680_RS11020;product=hypothetical protein;protein_id=WP_002494433.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	34586	35200	.	+	.	ID=gene-RM680_RS11025;Name=RM680_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11025;old_locus_tag=RM680_11045
NZ_JAVRJI010000017.1	Protein Homology	CDS	34586	35200	.	+	0	ID=cds-WP_001830177.1;Parent=gene-RM680_RS11025;Dbxref=GenBank:WP_001830177.1;Name=WP_001830177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499647.1;locus_tag=RM680_RS11025;product=succinate dehydrogenase cytochrome b558 subunit;protein_id=WP_001830177.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	35353	37119	.	+	.	ID=gene-RM680_RS11030;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=RM680_RS11030;old_locus_tag=RM680_11050
NZ_JAVRJI010000017.1	Protein Homology	CDS	35353	37119	.	+	0	ID=cds-WP_001830193.1;Parent=gene-RM680_RS11030;Dbxref=GenBank:WP_001830193.1;Name=WP_001830193.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499648.1;locus_tag=RM680_RS11030;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_001830193.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	37119	37961	.	+	.	ID=gene-RM680_RS11035;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=RM680_RS11035;old_locus_tag=RM680_11055
NZ_JAVRJI010000017.1	Protein Homology	CDS	37119	37961	.	+	0	ID=cds-WP_001830165.1;Parent=gene-RM680_RS11035;Dbxref=GenBank:WP_001830165.1;Name=WP_001830165.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499649.1;locus_tag=RM680_RS11035;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_001830165.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	38124	38927	.	+	.	ID=gene-RM680_RS11040;Name=racE;gbkey=Gene;gene=racE;gene_biotype=protein_coding;locus_tag=RM680_RS11040;old_locus_tag=RM680_11060
NZ_JAVRJI010000017.1	Protein Homology	CDS	38124	38927	.	+	0	ID=cds-WP_001830094.1;Parent=gene-RM680_RS11040;Dbxref=GenBank:WP_001830094.1;Name=WP_001830094.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368075.1;locus_tag=RM680_RS11040;product=glutamate racemase;protein_id=WP_001830094.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	38942	39529	.	+	.	ID=gene-RM680_RS11045;Name=RM680_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11045;old_locus_tag=RM680_11065
NZ_JAVRJI010000017.1	Protein Homology	CDS	38942	39529	.	+	0	ID=cds-WP_001830169.1;Parent=gene-RM680_RS11045;Dbxref=GenBank:WP_001830169.1;Name=WP_001830169.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830169.1;locus_tag=RM680_RS11045;product=XTP/dITP diphosphatase;protein_id=WP_001830169.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	39522	40031	.	+	.	ID=gene-RM680_RS11050;Name=RM680_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11050;old_locus_tag=RM680_11070
NZ_JAVRJI010000017.1	Protein Homology	CDS	39522	40031	.	+	0	ID=cds-WP_001830180.1;Parent=gene-RM680_RS11050;Dbxref=GenBank:WP_001830180.1;Name=WP_001830180.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830180.1;locus_tag=RM680_RS11050;product=YfcE family phosphodiesterase;protein_id=WP_001830180.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	40271	40344	.	-	.	ID=gene-RM680_RS11055;Name=RM680_RS11055;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS11055;old_locus_tag=RM680_11075
NZ_JAVRJI010000017.1	tRNAscan-SE	tRNA	40271	40344	.	-	.	ID=rna-RM680_RS11055;Parent=gene-RM680_RS11055;anticodon=(pos:complement(40308..40310));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11055;product=tRNA-Arg
NZ_JAVRJI010000017.1	tRNAscan-SE	exon	40271	40344	.	-	.	ID=exon-RM680_RS11055-1;Parent=rna-RM680_RS11055;anticodon=(pos:complement(40308..40310));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11055;product=tRNA-Arg
NZ_JAVRJI010000017.1	RefSeq	gene	40695	40826	.	+	.	ID=gene-RM680_RS11060;Name=RM680_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11060;old_locus_tag=RM680_11080
NZ_JAVRJI010000017.1	Protein Homology	CDS	40695	40826	.	+	0	ID=cds-WP_001830076.1;Parent=gene-RM680_RS11060;Dbxref=GenBank:WP_001830076.1;Name=WP_001830076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473295.1;locus_tag=RM680_RS11060;product=beta-class phenol-soluble modulin;protein_id=WP_001830076.1;transl_table=11
NZ_JAVRJI010000017.1	RefSeq	gene	40882	41016	.	+	.	ID=gene-RM680_RS11065;Name=RM680_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11065;old_locus_tag=RM680_11085
NZ_JAVRJI010000017.1	Protein Homology	CDS	40882	41016	.	+	0	ID=cds-WP_001830190.1;Parent=gene-RM680_RS11065;Dbxref=GenBank:WP_001830190.1;Name=WP_001830190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830190.1;locus_tag=RM680_RS11065;product=beta-class phenol-soluble modulin;protein_id=WP_001830190.1;transl_table=11
##sequence-region NZ_JAVRJI010000018.1 1 39132
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000018.1	RefSeq	region	1	39132	.	+	.	ID=NZ_JAVRJI010000018.1:1..39132;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000018.1	RefSeq	gene	18	93	.	-	.	ID=gene-RM680_RS11070;Name=RM680_RS11070;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS11070;old_locus_tag=RM680_11090
NZ_JAVRJI010000018.1	tRNAscan-SE	tRNA	18	93	.	-	.	ID=rna-RM680_RS11070;Parent=gene-RM680_RS11070;anticodon=(pos:complement(58..60));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11070;product=tRNA-Thr
NZ_JAVRJI010000018.1	tRNAscan-SE	exon	18	93	.	-	.	ID=exon-RM680_RS11070-1;Parent=rna-RM680_RS11070;anticodon=(pos:complement(58..60));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11070;product=tRNA-Thr
NZ_JAVRJI010000018.1	RefSeq	gene	100	175	.	-	.	ID=gene-RM680_RS11075;Name=RM680_RS11075;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS11075;old_locus_tag=RM680_11095
NZ_JAVRJI010000018.1	tRNAscan-SE	tRNA	100	175	.	-	.	ID=rna-RM680_RS11075;Parent=gene-RM680_RS11075;anticodon=(pos:complement(140..142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11075;product=tRNA-Val
NZ_JAVRJI010000018.1	tRNAscan-SE	exon	100	175	.	-	.	ID=exon-RM680_RS11075-1;Parent=rna-RM680_RS11075;anticodon=(pos:complement(140..142));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11075;product=tRNA-Val
NZ_JAVRJI010000018.1	RefSeq	gene	186	300	.	-	.	ID=gene-RM680_RS11080;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=RM680_RS11080;old_locus_tag=RM680_11100
NZ_JAVRJI010000018.1	cmsearch	rRNA	186	300	.	-	.	ID=rna-RM680_RS11080;Parent=gene-RM680_RS11080;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS11080;product=5S ribosomal RNA
NZ_JAVRJI010000018.1	cmsearch	exon	186	300	.	-	.	ID=exon-RM680_RS11080-1;Parent=rna-RM680_RS11080;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS11080;product=5S ribosomal RNA
NZ_JAVRJI010000018.1	RefSeq	gene	785	2272	.	-	.	ID=gene-RM680_RS11085;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=RM680_RS11085;old_locus_tag=RM680_11105
NZ_JAVRJI010000018.1	Protein Homology	CDS	785	2272	.	-	0	ID=cds-WP_001833056.1;Parent=gene-RM680_RS11085;Dbxref=GenBank:WP_001833056.1;Name=WP_001833056.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436798.1;locus_tag=RM680_RS11085;product=lysine--tRNA ligase;protein_id=WP_001833056.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	2608	3087	.	-	.	ID=gene-RM680_RS11090;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=RM680_RS11090;old_locus_tag=RM680_11110
NZ_JAVRJI010000018.1	Protein Homology	CDS	2608	3087	.	-	0	ID=cds-WP_001832213.1;Parent=gene-RM680_RS11090;Dbxref=GenBank:WP_001832213.1;Name=WP_001832213.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503786.1;locus_tag=RM680_RS11090;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_001832213.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	3088	3453	.	-	.	ID=gene-RM680_RS11095;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=RM680_RS11095;old_locus_tag=RM680_11115
NZ_JAVRJI010000018.1	Protein Homology	CDS	3088	3453	.	-	0	ID=cds-WP_001832204.1;Parent=gene-RM680_RS11095;Dbxref=GenBank:WP_001832204.1;Name=WP_001832204.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473218.1;locus_tag=RM680_RS11095;product=dihydroneopterin aldolase;protein_id=WP_001832204.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	3431	4249	.	-	.	ID=gene-RM680_RS11100;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=RM680_RS11100;old_locus_tag=RM680_11120
NZ_JAVRJI010000018.1	Protein Homology	CDS	3431	4249	.	-	0	ID=cds-WP_002440771.1;Parent=gene-RM680_RS11100;Dbxref=GenBank:WP_002440771.1;Name=WP_002440771.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499066.1;locus_tag=RM680_RS11100;product=dihydropteroate synthase;protein_id=WP_002440771.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	4545	5477	.	-	.	ID=gene-RM680_RS11105;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=RM680_RS11105;old_locus_tag=RM680_11125
NZ_JAVRJI010000018.1	Protein Homology	CDS	4545	5477	.	-	0	ID=cds-WP_001832242.1;Parent=gene-RM680_RS11105;Dbxref=GenBank:WP_001832242.1;Name=WP_001832242.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499065.1;locus_tag=RM680_RS11105;product=cysteine synthase A;protein_id=WP_001832242.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	5814	6695	.	-	.	ID=gene-RM680_RS11110;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=RM680_RS11110;old_locus_tag=RM680_11130
NZ_JAVRJI010000018.1	Protein Homology	CDS	5814	6695	.	-	0	ID=cds-WP_001832190.1;Parent=gene-RM680_RS11110;Dbxref=GenBank:WP_001832190.1;Name=WP_001832190.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458684.1;locus_tag=RM680_RS11110;product=Hsp33 family molecular chaperone HslO;protein_id=WP_001832190.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	6950	9052	.	-	.	ID=gene-RM680_RS11115;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=RM680_RS11115;old_locus_tag=RM680_11135
NZ_JAVRJI010000018.1	Protein Homology	CDS	6950	9052	.	-	0	ID=cds-WP_001832199.1;Parent=gene-RM680_RS11115;Dbxref=GenBank:WP_001832199.1;Name=WP_001832199.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503787.1;locus_tag=RM680_RS11115;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_001832199.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	9327	9866	.	-	.	ID=gene-RM680_RS11120;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=RM680_RS11120;old_locus_tag=RM680_11140
NZ_JAVRJI010000018.1	Protein Homology	CDS	9327	9866	.	-	0	ID=cds-WP_001832216.1;Parent=gene-RM680_RS11120;Dbxref=GenBank:WP_001832216.1;Name=WP_001832216.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485864.1;locus_tag=RM680_RS11120;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_001832216.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	9866	11164	.	-	.	ID=gene-RM680_RS11125;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=RM680_RS11125;old_locus_tag=RM680_11145
NZ_JAVRJI010000018.1	Protein Homology	CDS	9866	11164	.	-	0	ID=cds-WP_002440766.1;Parent=gene-RM680_RS11125;Dbxref=GenBank:WP_002440766.1;Name=WP_002440766.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469333.1;locus_tag=RM680_RS11125;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_002440766.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	11442	11843	.	-	.	ID=gene-RM680_RS11130;Name=RM680_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11130;old_locus_tag=RM680_11150
NZ_JAVRJI010000018.1	Protein Homology	CDS	11442	11843	.	-	0	ID=cds-WP_002440762.1;Parent=gene-RM680_RS11130;Dbxref=GenBank:WP_002440762.1;Name=WP_002440762.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499060.1;locus_tag=RM680_RS11130;product=S1 domain-containing RNA-binding protein;protein_id=WP_002440762.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	11937	12338	.	-	.	ID=gene-RM680_RS11135;Name=divIC;gbkey=Gene;gene=divIC;gene_biotype=protein_coding;locus_tag=RM680_RS11135;old_locus_tag=RM680_11155
NZ_JAVRJI010000018.1	Protein Homology	CDS	11937	12338	.	-	0	ID=cds-WP_001832241.1;Parent=gene-RM680_RS11135;Dbxref=GenBank:WP_001832241.1;Name=WP_001832241.1;gbkey=CDS;gene=divIC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368838.1;locus_tag=RM680_RS11135;product=cell division protein DivIC;protein_id=WP_001832241.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	12362	12625	.	-	.	ID=gene-RM680_RS11140;Name=RM680_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11140;old_locus_tag=RM680_11160
NZ_JAVRJI010000018.1	Protein Homology	CDS	12362	12625	.	-	0	ID=cds-WP_001832191.1;Parent=gene-RM680_RS11140;Dbxref=GenBank:WP_001832191.1;Name=WP_001832191.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832191.1;locus_tag=RM680_RS11140;product=RNA-binding S4 domain-containing protein;protein_id=WP_001832191.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	12622	13812	.	-	.	ID=gene-RM680_RS11145;Name=RM680_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11145;old_locus_tag=RM680_11165
NZ_JAVRJI010000018.1	Protein Homology	CDS	12622	13812	.	-	0	ID=cds-WP_001832236.1;Parent=gene-RM680_RS11145;Dbxref=GenBank:WP_001832236.1;Name=WP_001832236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458679.1;locus_tag=RM680_RS11145;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_001832236.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	13809	15350	.	-	.	ID=gene-RM680_RS11150;Name=RM680_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11150;old_locus_tag=RM680_11170
NZ_JAVRJI010000018.1	Protein Homology	CDS	13809	15350	.	-	0	ID=cds-WP_001832207.1;Parent=gene-RM680_RS11150;Dbxref=GenBank:WP_001832207.1;Name=WP_001832207.1;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497193.1;locus_tag=RM680_RS11150;product=polysaccharide biosynthesis protein;protein_id=WP_001832207.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	15340	18840	.	-	.	ID=gene-RM680_RS11155;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=RM680_RS11155;old_locus_tag=RM680_11175
NZ_JAVRJI010000018.1	Protein Homology	CDS	15340	18840	.	-	0	ID=cds-WP_162837083.1;Parent=gene-RM680_RS11155;Dbxref=GenBank:WP_162837083.1;Name=WP_162837083.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490925.1;locus_tag=RM680_RS11155;product=transcription-repair coupling factor;protein_id=WP_162837083.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	18846	19418	.	-	.	ID=gene-RM680_RS11160;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=RM680_RS11160;old_locus_tag=RM680_11180
NZ_JAVRJI010000018.1	Protein Homology	CDS	18846	19418	.	-	0	ID=cds-WP_001832229.1;Parent=gene-RM680_RS11160;Dbxref=GenBank:WP_001832229.1;Name=WP_001832229.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499054.1;locus_tag=RM680_RS11160;product=aminoacyl-tRNA hydrolase;protein_id=WP_001832229.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	19671	20330	.	-	.	ID=gene-RM680_RS11165;Name=RM680_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11165;old_locus_tag=RM680_11185
NZ_JAVRJI010000018.1	Protein Homology	CDS	19671	20330	.	-	0	ID=cds-WP_001832185.1;Parent=gene-RM680_RS11165;Dbxref=GenBank:WP_001832185.1;Name=WP_001832185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485035.1;locus_tag=RM680_RS11165;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_001832185.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	20500	21465	.	-	.	ID=gene-RM680_RS11170;Name=RM680_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11170;old_locus_tag=RM680_11190
NZ_JAVRJI010000018.1	Protein Homology	CDS	20500	21465	.	-	0	ID=cds-WP_001832233.1;Parent=gene-RM680_RS11170;Dbxref=GenBank:WP_001832233.1;Name=WP_001832233.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1;locus_tag=RM680_RS11170;product=ribose-phosphate diphosphokinase;protein_id=WP_001832233.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	21609	22964	.	-	.	ID=gene-RM680_RS11175;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=RM680_RS11175;old_locus_tag=RM680_11195
NZ_JAVRJI010000018.1	Protein Homology	CDS	21609	22964	.	-	0	ID=cds-WP_001832214.1;Parent=gene-RM680_RS11175;Dbxref=GenBank:WP_001832214.1;Name=WP_001832214.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832214.1;locus_tag=RM680_RS11175;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_001832214.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	23574	23882	.	-	.	ID=gene-RM680_RS11180;Name=spoVG;gbkey=Gene;gene=spoVG;gene_biotype=protein_coding;locus_tag=RM680_RS11180;old_locus_tag=RM680_11200
NZ_JAVRJI010000018.1	Protein Homology	CDS	23574	23882	.	-	0	ID=cds-WP_001832195.1;Parent=gene-RM680_RS11180;Dbxref=GenBank:WP_001832195.1;Name=WP_001832195.1;Ontology_term=GO:0030435;gbkey=CDS;gene=spoVG;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499048.1;locus_tag=RM680_RS11180;product=septation regulator SpoVG;protein_id=WP_001832195.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	23942	24322	.	-	.	ID=gene-RM680_RS11185;Name=RM680_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11185;old_locus_tag=RM680_11205
NZ_JAVRJI010000018.1	Protein Homology	CDS	23942	24322	.	-	0	ID=cds-WP_001832217.1;Parent=gene-RM680_RS11185;Dbxref=GenBank:WP_001832217.1;Name=WP_001832217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499047.1;locus_tag=RM680_RS11185;product=RidA family protein;protein_id=WP_001832217.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	24344	25168	.	-	.	ID=gene-RM680_RS11190;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=RM680_RS11190;old_locus_tag=RM680_11210
NZ_JAVRJI010000018.1	Protein Homology	CDS	24344	25168	.	-	0	ID=cds-WP_001832187.1;Parent=gene-RM680_RS11190;Dbxref=GenBank:WP_001832187.1;Name=WP_001832187.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499046.1;locus_tag=RM680_RS11190;product=pur operon repressor;protein_id=WP_001832187.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	25183	26031	.	-	.	ID=gene-RM680_RS11195;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=RM680_RS11195;old_locus_tag=RM680_11215
NZ_JAVRJI010000018.1	Protein Homology	CDS	25183	26031	.	-	0	ID=cds-WP_001832203.1;Parent=gene-RM680_RS11195;Dbxref=GenBank:WP_001832203.1;Name=WP_001832203.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499045.1;locus_tag=RM680_RS11195;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_001832203.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	26424	26687	.	-	.	ID=gene-RM680_RS11200;Name=veg;gbkey=Gene;gene=veg;gene_biotype=protein_coding;locus_tag=RM680_RS11200;old_locus_tag=RM680_11220
NZ_JAVRJI010000018.1	Protein Homology	CDS	26424	26687	.	-	0	ID=cds-WP_001832193.1;Parent=gene-RM680_RS11200;Dbxref=GenBank:WP_001832193.1;Name=WP_001832193.1;Ontology_term=GO:0006355,GO:0003700,GO:0046983;gbkey=CDS;gene=veg;go_function=DNA-binding transcription factor activity|0003700||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499044.1;locus_tag=RM680_RS11200;product=biofilm formation stimulator Veg;protein_id=WP_001832193.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	26787	27677	.	-	.	ID=gene-RM680_RS11205;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=RM680_RS11205;old_locus_tag=RM680_11225
NZ_JAVRJI010000018.1	Protein Homology	CDS	26787	27677	.	-	0	ID=cds-WP_001832224.1;Parent=gene-RM680_RS11205;Dbxref=GenBank:WP_001832224.1;Name=WP_001832224.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276768.1;locus_tag=RM680_RS11205;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_001832224.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	27678	28223	.	-	.	ID=gene-RM680_RS11210;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=RM680_RS11210;old_locus_tag=RM680_11230
NZ_JAVRJI010000018.1	Protein Homology	CDS	27678	28223	.	-	0	ID=cds-WP_001832196.1;Parent=gene-RM680_RS11210;Dbxref=GenBank:WP_001832196.1;Name=WP_001832196.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832196.1;locus_tag=RM680_RS11210;product=ribonuclease M5;protein_id=WP_001832196.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	28430	29200	.	-	.	ID=gene-RM680_RS11215;Name=RM680_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11215;old_locus_tag=RM680_11235
NZ_JAVRJI010000018.1	Protein Homology	CDS	28430	29200	.	-	0	ID=cds-WP_001832218.1;Parent=gene-RM680_RS11215;Dbxref=GenBank:WP_001832218.1;Name=WP_001832218.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176425.1;locus_tag=RM680_RS11215;product=TatD family hydrolase;protein_id=WP_001832218.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	29228	31198	.	-	.	ID=gene-RM680_RS11220;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=RM680_RS11220;old_locus_tag=RM680_11240
NZ_JAVRJI010000018.1	Protein Homology	CDS	29228	31198	.	-	0	ID=cds-WP_001833059.1;Parent=gene-RM680_RS11220;Dbxref=GenBank:WP_001833059.1;Name=WP_001833059.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499040.1;locus_tag=RM680_RS11220;product=methionine--tRNA ligase;protein_id=WP_001833059.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	31408	32247	.	-	.	ID=gene-RM680_RS11225;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=RM680_RS11225;old_locus_tag=RM680_11245
NZ_JAVRJI010000018.1	Protein Homology	CDS	31408	32247	.	-	0	ID=cds-WP_001832235.1;Parent=gene-RM680_RS11225;Dbxref=GenBank:WP_001832235.1;Name=WP_001832235.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447877.1;locus_tag=RM680_RS11225;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_001832235.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	32249	32497	.	-	.	ID=gene-RM680_RS11230;Name=RM680_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11230;old_locus_tag=RM680_11250
NZ_JAVRJI010000018.1	Protein Homology	CDS	32249	32497	.	-	0	ID=cds-WP_001832208.1;Parent=gene-RM680_RS11230;Dbxref=GenBank:WP_001832208.1;Name=WP_001832208.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012095287.1;locus_tag=RM680_RS11230;product=GIY-YIG nuclease family protein;protein_id=WP_001832208.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	32490	33215	.	-	.	ID=gene-RM680_RS11235;Name=RM680_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11235;old_locus_tag=RM680_11255
NZ_JAVRJI010000018.1	Protein Homology	CDS	32490	33215	.	-	0	ID=cds-WP_002457100.1;Parent=gene-RM680_RS11235;Dbxref=GenBank:WP_002457100.1;Name=WP_002457100.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832222.1;locus_tag=RM680_RS11235;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_002457100.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	33311	33658	.	-	.	ID=gene-RM680_RS11240;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=RM680_RS11240;old_locus_tag=RM680_11260
NZ_JAVRJI010000018.1	Protein Homology	CDS	33311	33658	.	-	0	ID=cds-WP_001832238.1;Parent=gene-RM680_RS11240;Dbxref=GenBank:WP_001832238.1;Name=WP_001832238.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832238.1;locus_tag=RM680_RS11240;product=DNA replication initiation control protein YabA;protein_id=WP_001832238.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	33675	34478	.	-	.	ID=gene-RM680_RS11245;Name=RM680_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11245;old_locus_tag=RM680_11265
NZ_JAVRJI010000018.1	Protein Homology	CDS	33675	34478	.	-	0	ID=cds-WP_020368348.1;Parent=gene-RM680_RS11245;Dbxref=GenBank:WP_020368348.1;Name=WP_020368348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499034.1;locus_tag=RM680_RS11245;product=PSP1 domain-containing protein;protein_id=WP_020368348.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	34480	35406	.	-	.	ID=gene-RM680_RS11250;Name=RM680_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11250;old_locus_tag=RM680_11270
NZ_JAVRJI010000018.1	Protein Homology	CDS	34480	35406	.	-	0	ID=cds-WP_001832202.1;Parent=gene-RM680_RS11250;Dbxref=GenBank:WP_001832202.1;Name=WP_001832202.1;Ontology_term=GO:0003689,GO:0003887,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA clamp loader activity|0003689||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832202.1;locus_tag=RM680_RS11250;product=DNA polymerase III subunit;protein_id=WP_001832202.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	35712	36041	.	-	.	ID=gene-RM680_RS11255;Name=RM680_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11255;old_locus_tag=RM680_11275
NZ_JAVRJI010000018.1	Protein Homology	CDS	35712	36041	.	-	0	ID=cds-WP_001832200.1;Parent=gene-RM680_RS11255;Dbxref=GenBank:WP_001832200.1;Name=WP_001832200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467733.1;locus_tag=RM680_RS11255;product=cyclic-di-AMP receptor;protein_id=WP_001832200.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	36075	36686	.	-	.	ID=gene-RM680_RS11260;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=RM680_RS11260;old_locus_tag=RM680_11280
NZ_JAVRJI010000018.1	Protein Homology	CDS	36075	36686	.	-	0	ID=cds-WP_001832211.1;Parent=gene-RM680_RS11260;Dbxref=GenBank:WP_001832211.1;Name=WP_001832211.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012086256.1;locus_tag=RM680_RS11260;product=dTMP kinase;protein_id=WP_001832211.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	36690	38027	.	-	.	ID=gene-RM680_RS11265;Name=RM680_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11265;old_locus_tag=RM680_11285
NZ_JAVRJI010000018.1	Protein Homology	CDS	36690	38027	.	-	0	ID=cds-WP_001832221.1;Parent=gene-RM680_RS11265;Dbxref=GenBank:WP_001832221.1;Name=WP_001832221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494266.1;locus_tag=RM680_RS11265;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_001832221.1;transl_table=11
NZ_JAVRJI010000018.1	RefSeq	gene	38056	38589	.	-	.	ID=gene-RM680_RS11270;Name=RM680_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11270;old_locus_tag=RM680_11290
NZ_JAVRJI010000018.1	Protein Homology	CDS	38056	38589	.	-	0	ID=cds-WP_002440739.1;Parent=gene-RM680_RS11270;Dbxref=GenBank:WP_002440739.1;Name=WP_002440739.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368347.1;locus_tag=RM680_RS11270;product=GNAT family N-acetyltransferase;protein_id=WP_002440739.1;transl_table=11
##sequence-region NZ_JAVRJI010000019.1 1 38589
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000019.1	RefSeq	region	1	38589	.	+	.	ID=NZ_JAVRJI010000019.1:1..38589;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000019.1	RefSeq	gene	1	420	.	-	.	ID=gene-RM680_RS11275;Name=RM680_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11275;old_locus_tag=RM680_11295;partial=true;start_range=.,1
NZ_JAVRJI010000019.1	Protein Homology	CDS	1	420	.	-	0	ID=cds-WP_002500401.1;Parent=gene-RM680_RS11275;Dbxref=GenBank:WP_002500401.1;Name=WP_002500401.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_217283962.1;locus_tag=RM680_RS11275;partial=true;product=YSIRK-type signal peptide-containing protein;protein_id=WP_002500401.1;start_range=.,1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	839	991	.	-	.	ID=gene-RM680_RS11280;Name=RM680_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11280;old_locus_tag=RM680_11300
NZ_JAVRJI010000019.1	Protein Homology	CDS	839	991	.	-	0	ID=cds-WP_002437676.1;Parent=gene-RM680_RS11280;Dbxref=GenBank:WP_002437676.1;Name=WP_002437676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500916.1;locus_tag=RM680_RS11280;product=beta-class phenol-soluble modulin;protein_id=WP_002437676.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	1197	2048	.	-	.	ID=gene-RM680_RS11285;Name=RM680_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11285;old_locus_tag=RM680_11305
NZ_JAVRJI010000019.1	Protein Homology	CDS	1197	2048	.	-	0	ID=cds-WP_020368292.1;Parent=gene-RM680_RS11285;Dbxref=GenBank:WP_020368292.1;Name=WP_020368292.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368292.1;locus_tag=RM680_RS11285;product=trypsin-like serine peptidase;protein_id=WP_020368292.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	2560	2901	.	+	.	ID=gene-RM680_RS11290;Name=RM680_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11290;old_locus_tag=RM680_11310
NZ_JAVRJI010000019.1	Protein Homology	CDS	2560	2901	.	+	0	ID=cds-WP_002456782.1;Parent=gene-RM680_RS11290;Dbxref=GenBank:WP_002456782.1;Name=WP_002456782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473479.1;locus_tag=RM680_RS11290;product=hypothetical protein;protein_id=WP_002456782.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	3094	4068	.	+	.	ID=gene-RM680_RS11295;Name=RM680_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11295;old_locus_tag=RM680_11315
NZ_JAVRJI010000019.1	Protein Homology	CDS	3094	4068	.	+	0	ID=cds-WP_020368125.1;Parent=gene-RM680_RS11295;Dbxref=GenBank:WP_020368125.1;Name=WP_020368125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498783.1;locus_tag=RM680_RS11295;product=extracellular solute-binding protein;protein_id=WP_020368125.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	4065	5603	.	+	.	ID=gene-RM680_RS11300;Name=RM680_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11300;old_locus_tag=RM680_11320
NZ_JAVRJI010000019.1	Protein Homology	CDS	4065	5603	.	+	0	ID=cds-WP_002469221.1;Parent=gene-RM680_RS11300;Dbxref=GenBank:WP_002469221.1;Name=WP_002469221.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503012.1;locus_tag=RM680_RS11300;product=sensor histidine kinase;protein_id=WP_002469221.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	5615	6370	.	+	.	ID=gene-RM680_RS11305;Name=RM680_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11305;old_locus_tag=RM680_11325
NZ_JAVRJI010000019.1	Protein Homology	CDS	5615	6370	.	+	0	ID=cds-WP_020368124.1;Parent=gene-RM680_RS11305;Dbxref=GenBank:WP_020368124.1;Name=WP_020368124.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498781.1;locus_tag=RM680_RS11305;product=response regulator transcription factor;protein_id=WP_020368124.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	6450	7829	.	-	.	ID=gene-RM680_RS11310;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=RM680_RS11310;old_locus_tag=RM680_11330
NZ_JAVRJI010000019.1	Protein Homology	CDS	6450	7829	.	-	0	ID=cds-WP_020368123.1;Parent=gene-RM680_RS11310;Dbxref=GenBank:WP_020368123.1;Name=WP_020368123.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498780.1;locus_tag=RM680_RS11310;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_020368123.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	8067	8561	.	+	.	ID=gene-RM680_RS11315;Name=RM680_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11315;old_locus_tag=RM680_11335
NZ_JAVRJI010000019.1	Protein Homology	CDS	8067	8561	.	+	0	ID=cds-WP_002469223.1;Parent=gene-RM680_RS11315;Dbxref=GenBank:WP_002469223.1;Name=WP_002469223.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454321.1;locus_tag=RM680_RS11315;product=isoprenylcysteine carboxyl methyltransferase family protein;protein_id=WP_002469223.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	pseudogene	8678	9818	.	+	.	ID=gene-RM680_RS11320;Name=RM680_RS11320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS11320;old_locus_tag=RM680_11340;pseudo=true
NZ_JAVRJI010000019.1	Protein Homology	CDS	8678	9818	.	+	0	ID=cds-RM680_RS11320;Parent=gene-RM680_RS11320;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558285.1;locus_tag=RM680_RS11320;product=IS3 family transposase;pseudo=true;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	10387	11154	.	-	.	ID=gene-RM680_RS11325;Name=RM680_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11325;old_locus_tag=RM680_11345
NZ_JAVRJI010000019.1	Protein Homology	CDS	10387	11154	.	-	0	ID=cds-WP_002437663.1;Parent=gene-RM680_RS11325;Dbxref=GenBank:WP_002437663.1;Name=WP_002437663.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502646.1;locus_tag=RM680_RS11325;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_002437663.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	11928	13412	.	-	.	ID=gene-RM680_RS11330;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=RM680_RS11330;old_locus_tag=RM680_11350
NZ_JAVRJI010000019.1	Protein Homology	CDS	11928	13412	.	-	0	ID=cds-WP_002456786.1;Parent=gene-RM680_RS11330;Dbxref=GenBank:WP_002456786.1;Name=WP_002456786.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490837.1;locus_tag=RM680_RS11330;product=L-lactate dehydrogenase (quinone);protein_id=WP_002456786.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	13611	14591	.	+	.	ID=gene-RM680_RS11335;Name=RM680_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11335;old_locus_tag=RM680_11355
NZ_JAVRJI010000019.1	Protein Homology	CDS	13611	14591	.	+	0	ID=cds-WP_001830546.1;Parent=gene-RM680_RS11335;Dbxref=GenBank:WP_001830546.1;Name=WP_001830546.1;Ontology_term=GO:0008033,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447550.1;locus_tag=RM680_RS11335;product=tRNA dihydrouridine synthase;protein_id=WP_001830546.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	14909	15268	.	+	.	ID=gene-RM680_RS11340;Name=RM680_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11340;old_locus_tag=RM680_11360
NZ_JAVRJI010000019.1	Protein Homology	CDS	14909	15268	.	+	0	ID=cds-WP_311563620.1;Parent=gene-RM680_RS11340;Dbxref=GenBank:WP_311563620.1;Name=WP_311563620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499138.1;locus_tag=RM680_RS11340;product=hypothetical protein;protein_id=WP_311563620.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	15826	16230	.	+	.	ID=gene-RM680_RS11345;Name=RM680_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11345;old_locus_tag=RM680_11365
NZ_JAVRJI010000019.1	Protein Homology	CDS	15826	16230	.	+	0	ID=cds-WP_002511290.1;Parent=gene-RM680_RS11345;Dbxref=GenBank:WP_002511290.1;Name=WP_002511290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489007.1;locus_tag=RM680_RS11345;product=DUF1433 domain-containing protein;protein_id=WP_002511290.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	16479	16664	.	-	.	ID=gene-RM680_RS11350;Name=RM680_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11350;old_locus_tag=RM680_11370
NZ_JAVRJI010000019.1	Protein Homology	CDS	16479	16664	.	-	0	ID=cds-WP_002437650.1;Parent=gene-RM680_RS11350;Dbxref=GenBank:WP_002437650.1;Name=WP_002437650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467603.1;locus_tag=RM680_RS11350;product=hypothetical protein;protein_id=WP_002437650.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	16976	17878	.	-	.	ID=gene-RM680_RS11355;Name=RM680_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11355;old_locus_tag=RM680_11375
NZ_JAVRJI010000019.1	Protein Homology	CDS	16976	17878	.	-	0	ID=cds-WP_002484923.1;Parent=gene-RM680_RS11355;Dbxref=GenBank:WP_002484923.1;Name=WP_002484923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477347.1;locus_tag=RM680_RS11355;product=hypothetical protein;protein_id=WP_002484923.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	18264	18887	.	+	.	ID=gene-RM680_RS11360;Name=RM680_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11360;old_locus_tag=RM680_11380
NZ_JAVRJI010000019.1	Protein Homology	CDS	18264	18887	.	+	0	ID=cds-WP_002489396.1;Parent=gene-RM680_RS11360;Dbxref=GenBank:WP_002489396.1;Name=WP_002489396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489396.1;locus_tag=RM680_RS11360;product=hypothetical protein;protein_id=WP_002489396.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	19151	19963	.	-	.	ID=gene-RM680_RS11365;Name=RM680_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11365;old_locus_tag=RM680_11385
NZ_JAVRJI010000019.1	Protein Homology	CDS	19151	19963	.	-	0	ID=cds-WP_002484917.1;Parent=gene-RM680_RS11365;Dbxref=GenBank:WP_002484917.1;Name=WP_002484917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500332.1;locus_tag=RM680_RS11365;product=HAD-IIB family hydrolase;protein_id=WP_002484917.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	20328	21215	.	-	.	ID=gene-RM680_RS11370;Name=RM680_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11370;old_locus_tag=RM680_11390
NZ_JAVRJI010000019.1	Protein Homology	CDS	20328	21215	.	-	0	ID=cds-WP_002484928.1;Parent=gene-RM680_RS11370;Dbxref=GenBank:WP_002484928.1;Name=WP_002484928.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497171.1;locus_tag=RM680_RS11370;product=mechanosensitive ion channel family protein;protein_id=WP_002484928.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	21573	22334	.	-	.	ID=gene-RM680_RS11375;Name=RM680_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11375;old_locus_tag=RM680_11395
NZ_JAVRJI010000019.1	Protein Homology	CDS	21573	22334	.	-	0	ID=cds-WP_002484919.1;Parent=gene-RM680_RS11375;Dbxref=GenBank:WP_002484919.1;Name=WP_002484919.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487264.1;locus_tag=RM680_RS11375;product=tandem-type lipoprotein;protein_id=WP_002484919.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	22678	23457	.	-	.	ID=gene-RM680_RS11380;Name=RM680_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11380;old_locus_tag=RM680_11400
NZ_JAVRJI010000019.1	Protein Homology	CDS	22678	23457	.	-	0	ID=cds-WP_002504647.1;Parent=gene-RM680_RS11380;Dbxref=GenBank:WP_002504647.1;Name=WP_002504647.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494544.1;locus_tag=RM680_RS11380;product=tandem-type lipoprotein;protein_id=WP_002504647.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	23811	23939	.	-	.	ID=gene-RM680_RS11385;Name=RM680_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11385;old_locus_tag=RM680_11405
NZ_JAVRJI010000019.1	Protein Homology	CDS	23811	23939	.	-	0	ID=cds-WP_002456794.1;Parent=gene-RM680_RS11385;Dbxref=GenBank:WP_002456794.1;Name=WP_002456794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830463.1;locus_tag=RM680_RS11385;product=hypothetical protein;protein_id=WP_002456794.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	23953	24837	.	-	.	ID=gene-RM680_RS11390;Name=RM680_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11390;old_locus_tag=RM680_11410
NZ_JAVRJI010000019.1	Protein Homology	CDS	23953	24837	.	-	0	ID=cds-WP_002489405.1;Parent=gene-RM680_RS11390;Dbxref=GenBank:WP_002489405.1;Name=WP_002489405.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175597.1;locus_tag=RM680_RS11390;product=permease;protein_id=WP_002489405.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	24925	25245	.	-	.	ID=gene-RM680_RS11395;Name=RM680_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11395;old_locus_tag=RM680_11415
NZ_JAVRJI010000019.1	Protein Homology	CDS	24925	25245	.	-	0	ID=cds-WP_002489400.1;Parent=gene-RM680_RS11395;Dbxref=GenBank:WP_002489400.1;Name=WP_002489400.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449352.1;locus_tag=RM680_RS11395;product=ArsR/SmtB family transcription factor;protein_id=WP_002489400.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	25766	26113	.	+	.	ID=gene-RM680_RS11400;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=protein_coding;locus_tag=RM680_RS11400;old_locus_tag=RM680_11420
NZ_JAVRJI010000019.1	Protein Homology	CDS	25766	26113	.	+	0	ID=cds-WP_002489393.1;Parent=gene-RM680_RS11400;Dbxref=GenBank:WP_002489393.1;Name=WP_002489393.1;Ontology_term=GO:0046685,GO:0003677;gbkey=CDS;gene=arsD;go_function=DNA binding|0003677||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474929.1;locus_tag=RM680_RS11400;product=arsenite efflux transporter metallochaperone ArsD;protein_id=WP_002489393.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	26100	27824	.	+	.	ID=gene-RM680_RS11405;Name=arsA;gbkey=Gene;gene=arsA;gene_biotype=protein_coding;locus_tag=RM680_RS11405;old_locus_tag=RM680_11425
NZ_JAVRJI010000019.1	Protein Homology	CDS	26100	27824	.	+	0	ID=cds-WP_020368013.1;Parent=gene-RM680_RS11405;Dbxref=GenBank:WP_020368013.1;Name=WP_020368013.1;Ontology_term=GO:0071722,GO:0005524,GO:0015446,GO:0016887;gbkey=CDS;gene=arsA;go_function=ATP binding|0005524||IEA,ATPase-coupled arsenite transmembrane transporter activity|0015446||IEA,ATP hydrolysis activity|0016887||IEA;go_process=detoxification of arsenic-containing substance|0071722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020364781.1;locus_tag=RM680_RS11405;product=arsenical pump-driving ATPase;protein_id=WP_020368013.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	27974	28288	.	+	.	ID=gene-RM680_RS11410;Name=RM680_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11410;old_locus_tag=RM680_11430
NZ_JAVRJI010000019.1	Protein Homology	CDS	27974	28288	.	+	0	ID=cds-WP_002437624.1;Parent=gene-RM680_RS11410;Dbxref=GenBank:WP_002437624.1;Name=WP_002437624.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509693.1;locus_tag=RM680_RS11410;product=ArsR/SmtB family transcription factor;protein_id=WP_002437624.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	28291	29580	.	+	.	ID=gene-RM680_RS11415;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=RM680_RS11415;old_locus_tag=RM680_11435
NZ_JAVRJI010000019.1	Protein Homology	CDS	28291	29580	.	+	0	ID=cds-WP_002489392.1;Parent=gene-RM680_RS11415;Dbxref=GenBank:WP_002489392.1;Name=WP_002489392.1;Ontology_term=GO:0015700,GO:0015105,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=arsenite transport|0015700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274434.1;locus_tag=RM680_RS11415;product=arsenite efflux transporter membrane subunit ArsB;protein_id=WP_002489392.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	29599	29994	.	+	.	ID=gene-RM680_RS11420;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=RM680_RS11420;old_locus_tag=RM680_11440
NZ_JAVRJI010000019.1	Protein Homology	CDS	29599	29994	.	+	0	ID=cds-WP_002489401.1;Parent=gene-RM680_RS11420;Dbxref=GenBank:WP_002489401.1;Name=WP_002489401.1;Ontology_term=GO:0046685,GO:0004725,GO:0030612;gbkey=CDS;gene=arsC;go_function=protein tyrosine phosphatase activity|0004725||IEA,arsenate reductase (thioredoxin) activity|0030612||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500395.1;locus_tag=RM680_RS11420;product=arsenate reductase (thioredoxin);protein_id=WP_002489401.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	30055	30795	.	-	.	ID=gene-RM680_RS11425;Name=RM680_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11425;old_locus_tag=RM680_11445
NZ_JAVRJI010000019.1	Protein Homology	CDS	30055	30795	.	-	0	ID=cds-WP_002455948.1;Parent=gene-RM680_RS11425;Dbxref=GenBank:WP_002455948.1;Name=WP_002455948.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362831.1;locus_tag=RM680_RS11425;product=sulfite exporter TauE/SafE family protein;protein_id=WP_002455948.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	30810	31070	.	-	.	ID=gene-RM680_RS11430;Name=cstR;gbkey=Gene;gene=cstR;gene_biotype=protein_coding;locus_tag=RM680_RS11430;old_locus_tag=RM680_11450
NZ_JAVRJI010000019.1	Protein Homology	CDS	30810	31070	.	-	0	ID=cds-WP_000456194.1;Parent=gene-RM680_RS11430;Dbxref=GenBank:WP_000456194.1;Name=WP_000456194.1;gbkey=CDS;gene=cstR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498640.1;locus_tag=RM680_RS11430;product=persulfide-sensing transcriptional repressor CstR;protein_id=WP_000456194.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	31209	32279	.	+	.	ID=gene-RM680_RS11435;Name=RM680_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11435;old_locus_tag=RM680_11455
NZ_JAVRJI010000019.1	Protein Homology	CDS	31209	32279	.	+	0	ID=cds-WP_001830526.1;Parent=gene-RM680_RS11435;Dbxref=GenBank:WP_001830526.1;Name=WP_001830526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019236144.1;locus_tag=RM680_RS11435;product=DsrE/DsrF/DrsH-like family protein;protein_id=WP_001830526.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	32298	33626	.	+	.	ID=gene-RM680_RS11440;Name=cstB;gbkey=Gene;gene=cstB;gene_biotype=protein_coding;locus_tag=RM680_RS11440;old_locus_tag=RM680_11460
NZ_JAVRJI010000019.1	Protein Homology	CDS	32298	33626	.	+	0	ID=cds-WP_002485357.1;Parent=gene-RM680_RS11440;Dbxref=GenBank:WP_002485357.1;Name=WP_002485357.1;gbkey=CDS;gene=cstB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488497.1;locus_tag=RM680_RS11440;product=persulfide dioxygenase-sulfurtransferase CstB;protein_id=WP_002485357.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	34100	34582	.	-	.	ID=gene-RM680_RS11445;Name=RM680_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11445;old_locus_tag=RM680_11465
NZ_JAVRJI010000019.1	Protein Homology	CDS	34100	34582	.	-	0	ID=cds-WP_002489005.1;Parent=gene-RM680_RS11445;Dbxref=GenBank:WP_002489005.1;Name=WP_002489005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494540.1;locus_tag=RM680_RS11445;product=YdhK family protein;protein_id=WP_002489005.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	34602	36035	.	-	.	ID=gene-RM680_RS11450;Name=RM680_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11450;old_locus_tag=RM680_11470
NZ_JAVRJI010000019.1	Protein Homology	CDS	34602	36035	.	-	0	ID=cds-WP_023567454.1;Parent=gene-RM680_RS11450;Dbxref=GenBank:WP_023567454.1;Name=WP_023567454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503776.1;locus_tag=RM680_RS11450;product=multicopper oxidase family protein;protein_id=WP_023567454.1;transl_table=11
NZ_JAVRJI010000019.1	RefSeq	gene	36050	38110	.	-	.	ID=gene-RM680_RS11455;Name=RM680_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11455;old_locus_tag=RM680_11475
NZ_JAVRJI010000019.1	Protein Homology	CDS	36050	38110	.	-	0	ID=cds-WP_002495171.1;Parent=gene-RM680_RS11455;Dbxref=GenBank:WP_002495171.1;Name=WP_002495171.1;Ontology_term=GO:0006812,GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449344.1;locus_tag=RM680_RS11455;product=heavy metal translocating P-type ATPase;protein_id=WP_002495171.1;transl_table=11
##sequence-region NZ_JAVRJI010000020.1 1 19785
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000020.1	RefSeq	region	1	19785	.	+	.	ID=NZ_JAVRJI010000020.1:1..19785;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000020.1	RefSeq	gene	327	1517	.	+	.	ID=gene-RM680_RS11460;Name=RM680_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11460;old_locus_tag=RM680_11480
NZ_JAVRJI010000020.1	Protein Homology	CDS	327	1517	.	+	0	ID=cds-WP_002467857.1;Parent=gene-RM680_RS11460;Dbxref=GenBank:WP_002467857.1;Name=WP_002467857.1;Ontology_term=GO:0004587,GO:0030170;gbkey=CDS;go_function=ornithine aminotransferase activity|0004587||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457191.1;locus_tag=RM680_RS11460;product=ornithine--oxo-acid transaminase;protein_id=WP_002467857.1;transl_table=11
NZ_JAVRJI010000020.1	RefSeq	gene	1626	2870	.	+	.	ID=gene-RM680_RS11465;Name=RM680_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11465;old_locus_tag=RM680_11485
NZ_JAVRJI010000020.1	Protein Homology	CDS	1626	2870	.	+	0	ID=cds-WP_001831995.1;Parent=gene-RM680_RS11465;Dbxref=GenBank:WP_001831995.1;Name=WP_001831995.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503494.1;locus_tag=RM680_RS11465;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_001831995.1;transl_table=11
NZ_JAVRJI010000020.1	RefSeq	gene	3062	4111	.	-	.	ID=gene-RM680_RS11470;Name=RM680_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11470;old_locus_tag=RM680_11490
NZ_JAVRJI010000020.1	Protein Homology	CDS	3062	4111	.	-	0	ID=cds-WP_311563626.1;Parent=gene-RM680_RS11470;Dbxref=GenBank:WP_311563626.1;Name=WP_311563626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493444.1;locus_tag=RM680_RS11470;product=glycerophosphodiester phosphodiesterase;protein_id=WP_311563626.1;transl_table=11
NZ_JAVRJI010000020.1	RefSeq	gene	4261	5652	.	-	.	ID=gene-RM680_RS11475;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=RM680_RS11475;old_locus_tag=RM680_11495
NZ_JAVRJI010000020.1	Protein Homology	CDS	4261	5652	.	-	0	ID=cds-WP_001831901.1;Parent=gene-RM680_RS11475;Dbxref=GenBank:WP_001831901.1;Name=WP_001831901.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439068.1;locus_tag=RM680_RS11475;product=argininosuccinate lyase;protein_id=WP_001831901.1;transl_table=11
NZ_JAVRJI010000020.1	RefSeq	gene	5642	6847	.	-	.	ID=gene-RM680_RS11480;Name=RM680_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11480;old_locus_tag=RM680_11500
NZ_JAVRJI010000020.1	Protein Homology	CDS	5642	6847	.	-	0	ID=cds-WP_001832499.1;Parent=gene-RM680_RS11480;Dbxref=GenBank:WP_001832499.1;Name=WP_001832499.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499452.1;locus_tag=RM680_RS11480;product=argininosuccinate synthase;protein_id=WP_001832499.1;transl_table=11
NZ_JAVRJI010000020.1	RefSeq	gene	7194	8525	.	+	.	ID=gene-RM680_RS11485;Name=RM680_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11485;old_locus_tag=RM680_11505
NZ_JAVRJI010000020.1	Protein Homology	CDS	7194	8525	.	+	0	ID=cds-WP_002495358.1;Parent=gene-RM680_RS11485;Dbxref=GenBank:WP_002495358.1;Name=WP_002495358.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499453.1;locus_tag=RM680_RS11485;product=glucose-6-phosphate isomerase;protein_id=WP_002495358.1;transl_table=11
NZ_JAVRJI010000020.1	RefSeq	gene	8843	9418	.	+	.	ID=gene-RM680_RS11490;Name=RM680_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11490;old_locus_tag=RM680_11510
NZ_JAVRJI010000020.1	Protein Homology	CDS	8843	9418	.	+	0	ID=cds-WP_001831991.1;Parent=gene-RM680_RS11490;Dbxref=GenBank:WP_001831991.1;Name=WP_001831991.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498264.1;locus_tag=RM680_RS11490;product=TVP38/TMEM64 family protein;protein_id=WP_001831991.1;transl_table=11
NZ_JAVRJI010000020.1	RefSeq	gene	9422	9943	.	+	.	ID=gene-RM680_RS11495;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=RM680_RS11495;old_locus_tag=RM680_11515
NZ_JAVRJI010000020.1	Protein Homology	CDS	9422	9943	.	+	0	ID=cds-WP_001831997.1;Parent=gene-RM680_RS11495;Dbxref=GenBank:WP_001831997.1;Name=WP_001831997.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476515.1;locus_tag=RM680_RS11495;product=signal peptidase I;protein_id=WP_001831997.1;transl_table=11
NZ_JAVRJI010000020.1	RefSeq	gene	9962	10537	.	+	.	ID=gene-RM680_RS11500;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=RM680_RS11500;old_locus_tag=RM680_11520
NZ_JAVRJI010000020.1	Protein Homology	CDS	9962	10537	.	+	0	ID=cds-WP_001831955.1;Parent=gene-RM680_RS11500;Dbxref=GenBank:WP_001831955.1;Name=WP_001831955.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465318.1;locus_tag=RM680_RS11500;product=signal peptidase I;protein_id=WP_001831955.1;transl_table=11
NZ_JAVRJI010000020.1	RefSeq	gene	10658	14137	.	+	.	ID=gene-RM680_RS11505;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=RM680_RS11505;old_locus_tag=RM680_11525
NZ_JAVRJI010000020.1	Protein Homology	CDS	10658	14137	.	+	0	ID=cds-WP_002497569.1;Parent=gene-RM680_RS11505;Dbxref=GenBank:WP_002497569.1;Name=WP_002497569.1;Ontology_term=GO:0000724,GO:0004527;gbkey=CDS;gene=addB;go_function=exonuclease activity|0004527||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000172362.1;locus_tag=RM680_RS11505;product=helicase-exonuclease AddAB subunit AddB;protein_id=WP_002497569.1;transl_table=11
NZ_JAVRJI010000020.1	RefSeq	gene	14124	17780	.	+	.	ID=gene-RM680_RS11510;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=RM680_RS11510;old_locus_tag=RM680_11530
NZ_JAVRJI010000020.1	Protein Homology	CDS	14124	17780	.	+	0	ID=cds-WP_002495360.1;Parent=gene-RM680_RS11510;Dbxref=GenBank:WP_002495360.1;Name=WP_002495360.1;Ontology_term=GO:0000724,GO:0006302,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA,double-strand break repair|0006302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495360.1;locus_tag=RM680_RS11510;product=helicase-exonuclease AddAB subunit AddA;protein_id=WP_002495360.1;transl_table=11
NZ_JAVRJI010000020.1	RefSeq	gene	17979	18884	.	+	.	ID=gene-RM680_RS11515;Name=RM680_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11515;old_locus_tag=RM680_11535
NZ_JAVRJI010000020.1	Protein Homology	CDS	17979	18884	.	+	0	ID=cds-WP_001831933.1;Parent=gene-RM680_RS11515;Dbxref=GenBank:WP_001831933.1;Name=WP_001831933.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504053.1;locus_tag=RM680_RS11515;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_001831933.1;transl_table=11
NZ_JAVRJI010000020.1	RefSeq	gene	19242	19643	.	+	.	ID=gene-RM680_RS11520;Name=RM680_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11520;old_locus_tag=RM680_11540
NZ_JAVRJI010000020.1	Protein Homology	CDS	19242	19643	.	+	0	ID=cds-WP_001831989.1;Parent=gene-RM680_RS11520;Dbxref=GenBank:WP_001831989.1;Name=WP_001831989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831989.1;locus_tag=RM680_RS11520;product=YisL family protein;protein_id=WP_001831989.1;transl_table=11
##sequence-region NZ_JAVRJI010000021.1 1 15544
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000021.1	RefSeq	region	1	15544	.	+	.	ID=NZ_JAVRJI010000021.1:1..15544;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000021.1	RefSeq	gene	653	2461	.	-	.	ID=gene-RM680_RS11525;Name=RM680_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11525;old_locus_tag=RM680_11545
NZ_JAVRJI010000021.1	Protein Homology	CDS	653	2461	.	-	0	ID=cds-WP_002438073.1;Parent=gene-RM680_RS11525;Dbxref=GenBank:WP_002438073.1;Name=WP_002438073.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505413.1;locus_tag=RM680_RS11525;product=acyltransferase family protein;protein_id=WP_002438073.1;transl_table=11
NZ_JAVRJI010000021.1	RefSeq	gene	2966	3673	.	-	.	ID=gene-RM680_RS11530;Name=RM680_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11530;old_locus_tag=RM680_11550
NZ_JAVRJI010000021.1	Protein Homology	CDS	2966	3673	.	-	0	ID=cds-WP_002438072.1;Parent=gene-RM680_RS11530;Dbxref=GenBank:WP_002438072.1;Name=WP_002438072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447068.1;locus_tag=RM680_RS11530;product=transglycosylase family protein;protein_id=WP_002438072.1;transl_table=11
NZ_JAVRJI010000021.1	RefSeq	gene	4329	5753	.	-	.	ID=gene-RM680_RS11535;Name=RM680_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11535;old_locus_tag=RM680_11555
NZ_JAVRJI010000021.1	Protein Homology	CDS	4329	5753	.	-	0	ID=cds-WP_001830598.1;Parent=gene-RM680_RS11535;Dbxref=GenBank:WP_001830598.1;Name=WP_001830598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366330.1;locus_tag=RM680_RS11535;product=polyphosphate--AMP phosphotransferase;protein_id=WP_001830598.1;transl_table=11
NZ_JAVRJI010000021.1	RefSeq	gene	5854	6912	.	-	.	ID=gene-RM680_RS11540;Name=RM680_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11540;old_locus_tag=RM680_11560
NZ_JAVRJI010000021.1	Protein Homology	CDS	5854	6912	.	-	0	ID=cds-WP_001830678.1;Parent=gene-RM680_RS11540;Dbxref=GenBank:WP_001830678.1;Name=WP_001830678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501341.1;locus_tag=RM680_RS11540;product=PTS transporter subunit IIC;protein_id=WP_001830678.1;transl_table=11
NZ_JAVRJI010000021.1	RefSeq	gene	7214	8593	.	-	.	ID=gene-RM680_RS11545;Name=RM680_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11545;old_locus_tag=RM680_11565
NZ_JAVRJI010000021.1	Protein Homology	CDS	7214	8593	.	-	0	ID=cds-WP_001830673.1;Parent=gene-RM680_RS11545;Dbxref=GenBank:WP_001830673.1;Name=WP_001830673.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438069.1;locus_tag=RM680_RS11545;product=amino acid permease;protein_id=WP_001830673.1;transl_table=11
NZ_JAVRJI010000021.1	RefSeq	gene	8800	9657	.	-	.	ID=gene-RM680_RS11550;Name=RM680_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11550;old_locus_tag=RM680_11570
NZ_JAVRJI010000021.1	Protein Homology	CDS	8800	9657	.	-	0	ID=cds-WP_001830635.1;Parent=gene-RM680_RS11550;Dbxref=GenBank:WP_001830635.1;Name=WP_001830635.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467976.1;locus_tag=RM680_RS11550;product=fructosamine kinase family protein;protein_id=WP_001830635.1;transl_table=11
NZ_JAVRJI010000021.1	RefSeq	gene	9881	10945	.	+	.	ID=gene-RM680_RS11555;Name=RM680_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11555;old_locus_tag=RM680_11575
NZ_JAVRJI010000021.1	Protein Homology	CDS	9881	10945	.	+	0	ID=cds-WP_001830663.1;Parent=gene-RM680_RS11555;Dbxref=GenBank:WP_001830663.1;Name=WP_001830663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501362.1;locus_tag=RM680_RS11555;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_001830663.1;transl_table=11
NZ_JAVRJI010000021.1	RefSeq	gene	11039	11308	.	+	.	ID=gene-RM680_RS11560;Name=RM680_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11560;old_locus_tag=RM680_11580
NZ_JAVRJI010000021.1	Protein Homology	CDS	11039	11308	.	+	0	ID=cds-WP_001830640.1;Parent=gene-RM680_RS11560;Dbxref=GenBank:WP_001830640.1;Name=WP_001830640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493826.1;locus_tag=RM680_RS11560;product=hypothetical protein;protein_id=WP_001830640.1;transl_table=11
NZ_JAVRJI010000021.1	RefSeq	gene	11439	11594	.	-	.	ID=gene-RM680_RS11565;Name=RM680_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11565;old_locus_tag=RM680_11585
NZ_JAVRJI010000021.1	GeneMarkS-2+	CDS	11439	11594	.	-	0	ID=cds-WP_001830677.1;Parent=gene-RM680_RS11565;Dbxref=GenBank:WP_001830677.1;Name=WP_001830677.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS11565;product=hypothetical protein;protein_id=WP_001830677.1;transl_table=11
NZ_JAVRJI010000021.1	RefSeq	gene	11877	12563	.	-	.	ID=gene-RM680_RS11570;Name=RM680_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11570;old_locus_tag=RM680_11590
NZ_JAVRJI010000021.1	Protein Homology	CDS	11877	12563	.	-	0	ID=cds-WP_153647446.1;Parent=gene-RM680_RS11570;Dbxref=GenBank:WP_153647446.1;Name=WP_153647446.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175101.1;locus_tag=RM680_RS11570;product=epoxyqueuosine reductase QueH;protein_id=WP_153647446.1;transl_table=11
NZ_JAVRJI010000021.1	RefSeq	gene	12870	14201	.	-	.	ID=gene-RM680_RS11575;Name=RM680_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11575;old_locus_tag=RM680_11595
NZ_JAVRJI010000021.1	Protein Homology	CDS	12870	14201	.	-	0	ID=cds-WP_001830674.1;Parent=gene-RM680_RS11575;Dbxref=GenBank:WP_001830674.1;Name=WP_001830674.1;Ontology_term=GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505058.1;locus_tag=RM680_RS11575;product=zinc ribbon domain-containing protein;protein_id=WP_001830674.1;transl_table=11
NZ_JAVRJI010000021.1	RefSeq	gene	14205	15215	.	-	.	ID=gene-RM680_RS11580;Name=RM680_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11580;old_locus_tag=RM680_11600
NZ_JAVRJI010000021.1	Protein Homology	CDS	14205	15215	.	-	0	ID=cds-WP_002495619.1;Parent=gene-RM680_RS11580;Dbxref=GenBank:WP_002495619.1;Name=WP_002495619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486857.1;locus_tag=RM680_RS11580;product=zinc-ribbon domain-containing protein;protein_id=WP_002495619.1;transl_table=11
##sequence-region NZ_JAVRJI010000022.1 1 13579
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000022.1	RefSeq	region	1	13579	.	+	.	ID=NZ_JAVRJI010000022.1:1..13579;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000022.1	RefSeq	gene	1	2622	.	-	.	ID=gene-RM680_RS11585;Name=RM680_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11585;old_locus_tag=RM680_11605;partial=true;start_range=.,1
NZ_JAVRJI010000022.1	Protein Homology	CDS	1	2622	.	-	0	ID=cds-WP_311563629.1;Parent=gene-RM680_RS11585;Dbxref=GenBank:WP_311563629.1;Name=WP_311563629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470707.1;locus_tag=RM680_RS11585;partial=true;product=lectin-like domain-containing protein;protein_id=WP_311563629.1;start_range=.,1;transl_table=11
NZ_JAVRJI010000022.1	RefSeq	gene	3045	4346	.	-	.	ID=gene-RM680_RS11590;Name=RM680_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11590;old_locus_tag=RM680_11610
NZ_JAVRJI010000022.1	Protein Homology	CDS	3045	4346	.	-	0	ID=cds-WP_002456320.1;Parent=gene-RM680_RS11590;Dbxref=GenBank:WP_002456320.1;Name=WP_002456320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446934.1;locus_tag=RM680_RS11590;product=hypothetical protein;protein_id=WP_002456320.1;transl_table=11
NZ_JAVRJI010000022.1	RefSeq	gene	4622	5437	.	-	.	ID=gene-RM680_RS11595;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=RM680_RS11595;old_locus_tag=RM680_11615
NZ_JAVRJI010000022.1	Protein Homology	CDS	4622	5437	.	-	0	ID=cds-WP_001832009.1;Parent=gene-RM680_RS11595;Dbxref=GenBank:WP_001832009.1;Name=WP_001832009.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363741.1;locus_tag=RM680_RS11595;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_001832009.1;transl_table=11
NZ_JAVRJI010000022.1	RefSeq	gene	5434	6186	.	-	.	ID=gene-RM680_RS11600;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=RM680_RS11600;old_locus_tag=RM680_11620
NZ_JAVRJI010000022.1	Protein Homology	CDS	5434	6186	.	-	0	ID=cds-WP_002437862.1;Parent=gene-RM680_RS11600;Dbxref=GenBank:WP_002437862.1;Name=WP_002437862.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498703.1;locus_tag=RM680_RS11600;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_002437862.1;transl_table=11
NZ_JAVRJI010000022.1	RefSeq	gene	6236	7009	.	-	.	ID=gene-RM680_RS11605;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=RM680_RS11605;old_locus_tag=RM680_11625
NZ_JAVRJI010000022.1	Protein Homology	CDS	6236	7009	.	-	0	ID=cds-WP_001832011.1;Parent=gene-RM680_RS11605;Dbxref=GenBank:WP_001832011.1;Name=WP_001832011.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0016020;gbkey=CDS;gene=phnC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832011.1;locus_tag=RM680_RS11605;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_001832011.1;transl_table=11
NZ_JAVRJI010000022.1	RefSeq	gene	7123	8079	.	-	.	ID=gene-RM680_RS11610;Name=RM680_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11610;old_locus_tag=RM680_11630
NZ_JAVRJI010000022.1	Protein Homology	CDS	7123	8079	.	-	0	ID=cds-WP_001832012.1;Parent=gene-RM680_RS11610;Dbxref=GenBank:WP_001832012.1;Name=WP_001832012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498705.1;locus_tag=RM680_RS11610;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WP_001832012.1;transl_table=11
NZ_JAVRJI010000022.1	RefSeq	pseudogene	8314	9864	.	+	.	ID=gene-RM680_RS11615;Name=RM680_RS11615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS11615;old_locus_tag=RM680_11635;pseudo=true
NZ_JAVRJI010000022.1	Protein Homology	CDS	8314	9864	.	+	0	ID=cds-RM680_RS11615;Parent=gene-RM680_RS11615;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486722.1;locus_tag=RM680_RS11615;product=DNA-binding protein;pseudo=true;transl_table=11
NZ_JAVRJI010000022.1	RefSeq	gene	9961	11496	.	+	.	ID=gene-RM680_RS11620;Name=RM680_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11620;old_locus_tag=RM680_11640
NZ_JAVRJI010000022.1	Protein Homology	CDS	9961	11496	.	+	0	ID=cds-WP_001832016.1;Parent=gene-RM680_RS11620;Dbxref=GenBank:WP_001832016.1;Name=WP_001832016.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489474.1;locus_tag=RM680_RS11620;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_001832016.1;transl_table=11
NZ_JAVRJI010000022.1	RefSeq	gene	11596	12771	.	-	.	ID=gene-RM680_RS11625;Name=RM680_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11625;old_locus_tag=RM680_11645
NZ_JAVRJI010000022.1	Protein Homology	CDS	11596	12771	.	-	0	ID=cds-WP_311563630.1;Parent=gene-RM680_RS11625;Dbxref=GenBank:WP_311563630.1;Name=WP_311563630.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496011.1;locus_tag=RM680_RS11625;product=MFS transporter;protein_id=WP_311563630.1;transl_table=11
NZ_JAVRJI010000022.1	RefSeq	gene	13362	13451	.	+	.	ID=gene-RM680_RS11630;Name=RM680_RS11630;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS11630;old_locus_tag=RM680_11650
NZ_JAVRJI010000022.1	tRNAscan-SE	tRNA	13362	13451	.	+	.	ID=rna-RM680_RS11630;Parent=gene-RM680_RS11630;anticodon=(pos:13400..13402);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11630;product=tRNA-Thr
NZ_JAVRJI010000022.1	tRNAscan-SE	exon	13362	13451	.	+	.	ID=exon-RM680_RS11630-1;Parent=rna-RM680_RS11630;anticodon=(pos:13400..13402);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11630;product=tRNA-Thr
##sequence-region NZ_JAVRJI010000023.1 1 11401
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000023.1	RefSeq	region	1	11401	.	+	.	ID=NZ_JAVRJI010000023.1:1..11401;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000023.1	RefSeq	gene	326	721	.	-	.	ID=gene-RM680_RS11635;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;locus_tag=RM680_RS11635;old_locus_tag=RM680_11655
NZ_JAVRJI010000023.1	Protein Homology	CDS	326	721	.	-	0	ID=cds-WP_001829294.1;Parent=gene-RM680_RS11635;Dbxref=GenBank:WP_001829294.1;Name=WP_001829294.1;Ontology_term=GO:0045892;gbkey=CDS;gene=spxA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499487.1;locus_tag=RM680_RS11635;product=transcriptional regulator SpxA;protein_id=WP_001829294.1;transl_table=11
NZ_JAVRJI010000023.1	RefSeq	gene	1012	2001	.	+	.	ID=gene-RM680_RS11640;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=RM680_RS11640;old_locus_tag=RM680_11660
NZ_JAVRJI010000023.1	Protein Homology	CDS	1012	2001	.	+	0	ID=cds-WP_001829285.1;Parent=gene-RM680_RS11640;Dbxref=GenBank:WP_001829285.1;Name=WP_001829285.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276231.1;locus_tag=RM680_RS11640;product=tryptophan--tRNA ligase;protein_id=WP_001829285.1;transl_table=11
NZ_JAVRJI010000023.1	RefSeq	gene	2059	3702	.	-	.	ID=gene-RM680_RS11645;Name=RM680_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11645;old_locus_tag=RM680_11665
NZ_JAVRJI010000023.1	Protein Homology	CDS	2059	3702	.	-	0	ID=cds-WP_002495633.1;Parent=gene-RM680_RS11645;Dbxref=GenBank:WP_002495633.1;Name=WP_002495633.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113781.1;locus_tag=RM680_RS11645;product=peptide ABC transporter substrate-binding protein;protein_id=WP_002495633.1;transl_table=11
NZ_JAVRJI010000023.1	RefSeq	gene	3726	4667	.	-	.	ID=gene-RM680_RS11650;Name=RM680_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11650;old_locus_tag=RM680_11670
NZ_JAVRJI010000023.1	Protein Homology	CDS	3726	4667	.	-	0	ID=cds-WP_002474509.1;Parent=gene-RM680_RS11650;Dbxref=GenBank:WP_002474509.1;Name=WP_002474509.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446068.1;locus_tag=RM680_RS11650;product=ABC transporter ATP-binding protein;protein_id=WP_002474509.1;transl_table=11
NZ_JAVRJI010000023.1	RefSeq	gene	4660	5739	.	-	.	ID=gene-RM680_RS11655;Name=RM680_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11655;old_locus_tag=RM680_11675
NZ_JAVRJI010000023.1	Protein Homology	CDS	4660	5739	.	-	0	ID=cds-WP_002474522.1;Parent=gene-RM680_RS11655;Dbxref=GenBank:WP_002474522.1;Name=WP_002474522.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439099.1;locus_tag=RM680_RS11655;product=ABC transporter ATP-binding protein;protein_id=WP_002474522.1;transl_table=11
NZ_JAVRJI010000023.1	RefSeq	gene	5754	6824	.	-	.	ID=gene-RM680_RS11660;Name=opp3C;gbkey=Gene;gene=opp3C;gene_biotype=protein_coding;locus_tag=RM680_RS11660;old_locus_tag=RM680_11680
NZ_JAVRJI010000023.1	Protein Homology	CDS	5754	6824	.	-	0	ID=cds-WP_002468456.1;Parent=gene-RM680_RS11660;Dbxref=GenBank:WP_002468456.1;Name=WP_002468456.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493433.1;locus_tag=RM680_RS11660;product=oligopeptide ABC transporter permease;protein_id=WP_002468456.1;transl_table=11
NZ_JAVRJI010000023.1	RefSeq	gene	6824	7756	.	-	.	ID=gene-RM680_RS11665;Name=opp3b;gbkey=Gene;gene=opp3b;gene_biotype=protein_coding;locus_tag=RM680_RS11665;old_locus_tag=RM680_11685
NZ_JAVRJI010000023.1	Protein Homology	CDS	6824	7756	.	-	0	ID=cds-WP_311563631.1;Parent=gene-RM680_RS11665;Dbxref=GenBank:WP_311563631.1;Name=WP_311563631.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3b;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499476.1;locus_tag=RM680_RS11665;product=oligopeptide ABC transporter permease;protein_id=WP_311563631.1;transl_table=11
NZ_JAVRJI010000023.1	RefSeq	gene	7997	8368	.	+	.	ID=gene-RM680_RS11670;Name=RM680_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11670;old_locus_tag=RM680_11690
NZ_JAVRJI010000023.1	Protein Homology	CDS	7997	8368	.	+	0	ID=cds-WP_001829304.1;Parent=gene-RM680_RS11670;Dbxref=GenBank:WP_001829304.1;Name=WP_001829304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829304.1;locus_tag=RM680_RS11670;product=DUF3899 domain-containing protein;protein_id=WP_001829304.1;transl_table=11
NZ_JAVRJI010000023.1	RefSeq	gene	8439	9683	.	-	.	ID=gene-RM680_RS11675;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=RM680_RS11675;old_locus_tag=RM680_11695
NZ_JAVRJI010000023.1	Protein Homology	CDS	8439	9683	.	-	0	ID=cds-WP_002495632.1;Parent=gene-RM680_RS11675;Dbxref=GenBank:WP_002495632.1;Name=WP_002495632.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464399.1;locus_tag=RM680_RS11675;product=beta-ketoacyl-ACP synthase II;protein_id=WP_002495632.1;transl_table=11
NZ_JAVRJI010000023.1	RefSeq	gene	9695	10636	.	-	.	ID=gene-RM680_RS11680;Name=RM680_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11680;old_locus_tag=RM680_11700
NZ_JAVRJI010000023.1	Protein Homology	CDS	9695	10636	.	-	0	ID=cds-WP_002474531.1;Parent=gene-RM680_RS11680;Dbxref=GenBank:WP_002474531.1;Name=WP_002474531.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369794.1;locus_tag=RM680_RS11680;product=beta-ketoacyl-ACP synthase III;protein_id=WP_002474531.1;transl_table=11
NZ_JAVRJI010000023.1	RefSeq	gene	10917	11111	.	+	.	ID=gene-RM680_RS11685;Name=RM680_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11685;old_locus_tag=RM680_11705
NZ_JAVRJI010000023.1	Protein Homology	CDS	10917	11111	.	+	0	ID=cds-WP_002457178.1;Parent=gene-RM680_RS11685;Dbxref=GenBank:WP_002457178.1;Name=WP_002457178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457178.1;locus_tag=RM680_RS11685;product=YjzD family protein;protein_id=WP_002457178.1;transl_table=11
##sequence-region NZ_JAVRJI010000024.1 1 9190
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000024.1	RefSeq	region	1	9190	.	+	.	ID=NZ_JAVRJI010000024.1:1..9190;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000024.1	RefSeq	gene	1	744	.	-	.	ID=gene-RM680_RS11690;Name=mobV;gbkey=Gene;gene=mobV;gene_biotype=protein_coding;locus_tag=RM680_RS11690;old_locus_tag=RM680_11710;partial=true;start_range=.,1
NZ_JAVRJI010000024.1	Protein Homology	CDS	1	744	.	-	0	ID=cds-WP_311563633.1;Parent=gene-RM680_RS11690;Dbxref=GenBank:WP_311563633.1;Name=WP_311563633.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002958641.1;locus_tag=RM680_RS11690;partial=true;product=MobV family relaxase;protein_id=WP_311563633.1;start_range=.,1;transl_table=11
NZ_JAVRJI010000024.1	RefSeq	gene	1199	1609	.	+	.	ID=gene-RM680_RS11695;Name=RM680_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11695;old_locus_tag=RM680_11715
NZ_JAVRJI010000024.1	Protein Homology	CDS	1199	1609	.	+	0	ID=cds-WP_143978091.1;Parent=gene-RM680_RS11695;Dbxref=GenBank:WP_143978091.1;Name=WP_143978091.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002958643.1;locus_tag=RM680_RS11695;product=plasmid mobilization protein;protein_id=WP_143978091.1;transl_table=11
NZ_JAVRJI010000024.1	RefSeq	gene	1774	2961	.	-	.	ID=gene-RM680_RS11700;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=RM680_RS11700;old_locus_tag=RM680_11720
NZ_JAVRJI010000024.1	Protein Homology	CDS	1774	2961	.	-	0	ID=cds-WP_162154013.1;Parent=gene-RM680_RS11700;Dbxref=GenBank:WP_162154013.1;Name=WP_162154013.1;Ontology_term=GO:0033014,GO:0003870,GO:0030170;gbkey=CDS;gene=hemA;go_function=5-aminolevulinate synthase activity|0003870||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176742.1;locus_tag=RM680_RS11700;product=5-aminolevulinate synthase;protein_id=WP_162154013.1;transl_table=11
NZ_JAVRJI010000024.1	RefSeq	gene	2962	4107	.	-	.	ID=gene-RM680_RS11705;Name=RM680_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11705;old_locus_tag=RM680_11725
NZ_JAVRJI010000024.1	Protein Homology	CDS	2962	4107	.	-	0	ID=cds-WP_162154012.1;Parent=gene-RM680_RS11705;Dbxref=GenBank:WP_162154012.1;Name=WP_162154012.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434977.1;locus_tag=RM680_RS11705;product=MFS transporter;protein_id=WP_162154012.1;transl_table=11
NZ_JAVRJI010000024.1	RefSeq	gene	4110	5168	.	-	.	ID=gene-RM680_RS11710;Name=RM680_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11710;old_locus_tag=RM680_11730
NZ_JAVRJI010000024.1	Protein Homology	CDS	4110	5168	.	-	0	ID=cds-WP_103175434.1;Parent=gene-RM680_RS11710;Dbxref=GenBank:WP_103175434.1;Name=WP_103175434.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013567.7;locus_tag=RM680_RS11710;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_103175434.1;transl_table=11
NZ_JAVRJI010000024.1	RefSeq	gene	5183	5662	.	-	.	ID=gene-RM680_RS11715;Name=RM680_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11715;old_locus_tag=RM680_11735
NZ_JAVRJI010000024.1	Protein Homology	CDS	5183	5662	.	-	0	ID=cds-WP_103175435.1;Parent=gene-RM680_RS11715;Dbxref=GenBank:WP_103175435.1;Name=WP_103175435.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF025054.6;locus_tag=RM680_RS11715;product=GNAT family N-acetyltransferase;protein_id=WP_103175435.1;transl_table=11
NZ_JAVRJI010000024.1	RefSeq	gene	5770	6630	.	+	.	ID=gene-RM680_RS11720;Name=RM680_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11720;old_locus_tag=RM680_11740
NZ_JAVRJI010000024.1	Protein Homology	CDS	5770	6630	.	+	0	ID=cds-WP_237635483.1;Parent=gene-RM680_RS11720;Dbxref=GenBank:WP_237635483.1;Name=WP_237635483.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489187.1;locus_tag=RM680_RS11720;product=LysR family transcriptional regulator;protein_id=WP_237635483.1;transl_table=11
NZ_JAVRJI010000024.1	RefSeq	gene	7207	7812	.	+	.	ID=gene-RM680_RS11725;Name=RM680_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11725;old_locus_tag=RM680_11745
NZ_JAVRJI010000024.1	Protein Homology	CDS	7207	7812	.	+	0	ID=cds-WP_002498907.1;Parent=gene-RM680_RS11725;Dbxref=GenBank:WP_002498907.1;Name=WP_002498907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001076470.1;locus_tag=RM680_RS11725;product=helix-turn-helix domain-containing protein;protein_id=WP_002498907.1;transl_table=11
NZ_JAVRJI010000024.1	RefSeq	gene	7860	8717	.	-	.	ID=gene-RM680_RS11730;Name=RM680_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11730;old_locus_tag=RM680_11750
NZ_JAVRJI010000024.1	Protein Homology	CDS	7860	8717	.	-	0	ID=cds-WP_002501810.1;Parent=gene-RM680_RS11730;Dbxref=GenBank:WP_002501810.1;Name=WP_002501810.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829553.1;locus_tag=RM680_RS11730;product=replication initiation protein;protein_id=WP_002501810.1;transl_table=11
##sequence-region NZ_JAVRJI010000025.1 1 8104
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000025.1	RefSeq	region	1	8104	.	+	.	ID=NZ_JAVRJI010000025.1:1..8104;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000025.1	RefSeq	gene	331	1647	.	-	.	ID=gene-RM680_RS11735;Name=RM680_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11735;old_locus_tag=RM680_11755
NZ_JAVRJI010000025.1	Protein Homology	CDS	331	1647	.	-	0	ID=cds-WP_002489420.1;Parent=gene-RM680_RS11735;Dbxref=GenBank:WP_002489420.1;Name=WP_002489420.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499461.1;locus_tag=RM680_RS11735;product=CoA-disulfide reductase;protein_id=WP_002489420.1;transl_table=11
NZ_JAVRJI010000025.1	RefSeq	gene	1727	2548	.	-	.	ID=gene-RM680_RS11740;Name=RM680_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11740;old_locus_tag=RM680_11760
NZ_JAVRJI010000025.1	Protein Homology	CDS	1727	2548	.	-	0	ID=cds-WP_001829328.1;Parent=gene-RM680_RS11740;Dbxref=GenBank:WP_001829328.1;Name=WP_001829328.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829328.1;locus_tag=RM680_RS11740;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_001829328.1;transl_table=11
NZ_JAVRJI010000025.1	RefSeq	gene	2661	2969	.	+	.	ID=gene-RM680_RS11745;Name=RM680_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11745;old_locus_tag=RM680_11765
NZ_JAVRJI010000025.1	Protein Homology	CDS	2661	2969	.	+	0	ID=cds-WP_001829290.1;Parent=gene-RM680_RS11745;Dbxref=GenBank:WP_001829290.1;Name=WP_001829290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486294.1;locus_tag=RM680_RS11745;product=metal-sulfur cluster assembly factor;protein_id=WP_001829290.1;transl_table=11
NZ_JAVRJI010000025.1	RefSeq	gene	3364	5187	.	+	.	ID=gene-RM680_RS11750;Name=RM680_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11750;old_locus_tag=RM680_11770
NZ_JAVRJI010000025.1	Protein Homology	CDS	3364	5187	.	+	0	ID=cds-WP_002489421.1;Parent=gene-RM680_RS11750;Dbxref=GenBank:WP_002489421.1;Name=WP_002489421.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476521.1;locus_tag=RM680_RS11750;product=acyltransferase family protein;protein_id=WP_002489421.1;transl_table=11
NZ_JAVRJI010000025.1	RefSeq	gene	5396	8005	.	+	.	ID=gene-RM680_RS11755;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=RM680_RS11755;old_locus_tag=RM680_11775
NZ_JAVRJI010000025.1	Protein Homology	CDS	5396	8005	.	+	0	ID=cds-WP_002467691.1;Parent=gene-RM680_RS11755;Dbxref=GenBank:WP_002467691.1;Name=WP_002467691.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475121.1;locus_tag=RM680_RS11755;product=ATP-dependent chaperone ClpB;protein_id=WP_002467691.1;transl_table=11
##sequence-region NZ_JAVRJI010000026.1 1 7180
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000026.1	RefSeq	region	1	7180	.	+	.	ID=NZ_JAVRJI010000026.1:1..7180;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000026.1	RefSeq	gene	772	927	.	-	.	ID=gene-RM680_RS11760;Name=RM680_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11760;old_locus_tag=RM680_11780
NZ_JAVRJI010000026.1	Protein Homology	CDS	772	927	.	-	0	ID=cds-WP_002456286.1;Parent=gene-RM680_RS11760;Dbxref=GenBank:WP_002456286.1;Name=WP_002456286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498916.1;locus_tag=RM680_RS11760;product=beta-class phenol-soluble modulin;protein_id=WP_002456286.1;transl_table=11
NZ_JAVRJI010000026.1	RefSeq	gene	1367	2239	.	+	.	ID=gene-RM680_RS11765;Name=RM680_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11765;old_locus_tag=RM680_11785
NZ_JAVRJI010000026.1	Protein Homology	CDS	1367	2239	.	+	0	ID=cds-WP_002503825.1;Parent=gene-RM680_RS11765;Dbxref=GenBank:WP_002503825.1;Name=WP_002503825.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503825.1;locus_tag=RM680_RS11765;product=replication initiation protein;protein_id=WP_002503825.1;transl_table=11
NZ_JAVRJI010000026.1	RefSeq	gene	2495	2560	.	-	.	ID=gene-RM680_RS12035;Name=RM680_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS12035
NZ_JAVRJI010000026.1	Protein Homology	CDS	2495	2560	.	-	0	ID=cds-WP_145353842.1;Parent=gene-RM680_RS12035;Dbxref=GenBank:WP_145353842.1;Name=WP_145353842.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033608.1;locus_tag=RM680_RS12035;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_145353842.1;transl_table=11
NZ_JAVRJI010000026.1	RefSeq	gene	2896	3462	.	+	.	ID=gene-RM680_RS11770;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=RM680_RS11770;old_locus_tag=RM680_11790
NZ_JAVRJI010000026.1	Protein Homology	CDS	2896	3462	.	+	0	ID=cds-WP_311047670.1;Parent=gene-RM680_RS11770;Dbxref=GenBank:WP_311047670.1;Name=WP_311047670.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503824.1;locus_tag=RM680_RS11770;product=signal peptidase I;protein_id=WP_311047670.1;transl_table=11
NZ_JAVRJI010000026.1	RefSeq	gene	3941	4042	.	+	.	ID=gene-RM680_RS11775;Name=RM680_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11775;old_locus_tag=RM680_11795
NZ_JAVRJI010000026.1	Protein Homology	CDS	3941	4042	.	+	0	ID=cds-WP_002497230.1;Parent=gene-RM680_RS11775;Dbxref=GenBank:WP_002497230.1;Name=WP_002497230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228874.1;locus_tag=RM680_RS11775;product=type I toxin-antitoxin system Fst family toxin;protein_id=WP_002497230.1;transl_table=11
NZ_JAVRJI010000026.1	RefSeq	gene	4142	4423	.	-	.	ID=gene-RM680_RS11780;Name=RM680_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11780;old_locus_tag=RM680_11800
NZ_JAVRJI010000026.1	Protein Homology	CDS	4142	4423	.	-	0	ID=cds-WP_002456289.1;Parent=gene-RM680_RS11780;Dbxref=GenBank:WP_002456289.1;Name=WP_002456289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456289.1;locus_tag=RM680_RS11780;product=hypothetical protein;protein_id=WP_002456289.1;transl_table=11
NZ_JAVRJI010000026.1	RefSeq	pseudogene	4869	5466	.	+	.	ID=gene-RM680_RS11785;Name=RM680_RS11785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS11785;old_locus_tag=RM680_11805;pseudo=true
NZ_JAVRJI010000026.1	Protein Homology	CDS	4869	5466	.	+	0	ID=cds-RM680_RS11785;Parent=gene-RM680_RS11785;Note=frameshifted%3B internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449168.1;locus_tag=RM680_RS11785;product=recombinase family protein;pseudo=true;transl_table=11
NZ_JAVRJI010000026.1	RefSeq	gene	6498	7180	.	+	.	ID=gene-RM680_RS11790;Name=RM680_RS11790;end_range=7180,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11790;old_locus_tag=RM680_11810;partial=true
NZ_JAVRJI010000026.1	Protein Homology	CDS	6498	7180	.	+	0	ID=cds-WP_311563635.1;Parent=gene-RM680_RS11790;Dbxref=GenBank:WP_311563635.1;Name=WP_311563635.1;end_range=7180,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456291.1;locus_tag=RM680_RS11790;partial=true;product=hypothetical protein;protein_id=WP_311563635.1;transl_table=11
##sequence-region NZ_JAVRJI010000027.1 1 6254
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000027.1	RefSeq	region	1	6254	.	+	.	ID=NZ_JAVRJI010000027.1:1..6254;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000027.1	RefSeq	gene	237	539	.	+	.	ID=gene-RM680_RS11795;Name=RM680_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11795;old_locus_tag=RM680_11815
NZ_JAVRJI010000027.1	Protein Homology	CDS	237	539	.	+	0	ID=cds-WP_311563636.1;Parent=gene-RM680_RS11795;Dbxref=GenBank:WP_311563636.1;Name=WP_311563636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455860.1;locus_tag=RM680_RS11795;product=hypothetical protein;protein_id=WP_311563636.1;transl_table=11
NZ_JAVRJI010000027.1	RefSeq	gene	673	1257	.	+	.	ID=gene-RM680_RS11800;Name=RM680_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11800;old_locus_tag=RM680_11820
NZ_JAVRJI010000027.1	Protein Homology	CDS	673	1257	.	+	0	ID=cds-WP_162172854.1;Parent=gene-RM680_RS11800;Dbxref=GenBank:WP_162172854.1;Name=WP_162172854.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002482443.1;locus_tag=RM680_RS11800;product=DsbA family protein;protein_id=WP_162172854.1;transl_table=11
NZ_JAVRJI010000027.1	RefSeq	gene	1979	2191	.	-	.	ID=gene-RM680_RS11805;Name=RM680_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11805;old_locus_tag=RM680_11825
NZ_JAVRJI010000027.1	GeneMarkS-2+	CDS	1979	2191	.	-	0	ID=cds-WP_311563637.1;Parent=gene-RM680_RS11805;Dbxref=GenBank:WP_311563637.1;Name=WP_311563637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS11805;product=bacteriocin;protein_id=WP_311563637.1;transl_table=11
NZ_JAVRJI010000027.1	RefSeq	gene	2360	4426	.	+	.	ID=gene-RM680_RS11810;Name=RM680_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11810;old_locus_tag=RM680_11830
NZ_JAVRJI010000027.1	Protein Homology	CDS	2360	4426	.	+	0	ID=cds-WP_311563639.1;Parent=gene-RM680_RS11810;Dbxref=GenBank:WP_311563639.1;Name=WP_311563639.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:TIGR01193.1;locus_tag=RM680_RS11810;product=peptidase domain-containing ABC transporter;protein_id=WP_311563639.1;transl_table=11
NZ_JAVRJI010000027.1	RefSeq	gene	4921	5064	.	-	.	ID=gene-RM680_RS11815;Name=RM680_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11815;old_locus_tag=RM680_11835
NZ_JAVRJI010000027.1	Protein Homology	CDS	4921	5064	.	-	0	ID=cds-WP_002485548.1;Parent=gene-RM680_RS11815;Dbxref=GenBank:WP_002485548.1;Name=WP_002485548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467993.1;locus_tag=RM680_RS11815;product=hypothetical protein;protein_id=WP_002485548.1;transl_table=11
NZ_JAVRJI010000027.1	RefSeq	gene	5170	6036	.	-	.	ID=gene-RM680_RS11820;Name=RM680_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11820;old_locus_tag=RM680_11840
NZ_JAVRJI010000027.1	Protein Homology	CDS	5170	6036	.	-	0	ID=cds-WP_311563641.1;Parent=gene-RM680_RS11820;Dbxref=GenBank:WP_311563641.1;Name=WP_311563641.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494364.1;locus_tag=RM680_RS11820;product=replication initiation protein;protein_id=WP_311563641.1;transl_table=11
##sequence-region NZ_JAVRJI010000028.1 1 5586
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000028.1	RefSeq	region	1	5586	.	+	.	ID=NZ_JAVRJI010000028.1:1..5586;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000028.1	RefSeq	gene	116	1060	.	-	.	ID=gene-RM680_RS11825;Name=RM680_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11825;old_locus_tag=RM680_11845
NZ_JAVRJI010000028.1	Protein Homology	CDS	116	1060	.	-	0	ID=cds-WP_053868223.1;Parent=gene-RM680_RS11825;Dbxref=GenBank:WP_053868223.1;Name=WP_053868223.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722130.1;locus_tag=RM680_RS11825;product=replication initiation factor domain-containing protein;protein_id=WP_053868223.1;transl_table=11
NZ_JAVRJI010000028.1	RefSeq	gene	1452	1775	.	+	.	ID=gene-RM680_RS11830;Name=qacC;gbkey=Gene;gene=qacC;gene_biotype=protein_coding;locus_tag=RM680_RS11830;old_locus_tag=RM680_11850
NZ_JAVRJI010000028.1	Protein Homology	CDS	1452	1775	.	+	0	ID=cds-WP_001146389.1;Parent=gene-RM680_RS11830;Dbxref=GenBank:WP_001146389.1;Name=WP_001146389.1;gbkey=CDS;gene=qacC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001146389.1;locus_tag=RM680_RS11830;product=quaternary ammonium compound efflux SMR transporter QacC;protein_id=WP_001146389.1;transl_table=11
NZ_JAVRJI010000028.1	RefSeq	gene	1941	2450	.	-	.	ID=gene-RM680_RS11835;Name=RM680_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11835;old_locus_tag=RM680_11855
NZ_JAVRJI010000028.1	Protein Homology	CDS	1941	2450	.	-	0	ID=cds-WP_311563648.1;Parent=gene-RM680_RS11835;Dbxref=GenBank:WP_311563648.1;Name=WP_311563648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502825.1;locus_tag=RM680_RS11835;product=DUF334 domain-containing protein;protein_id=WP_311563648.1;transl_table=11
NZ_JAVRJI010000028.1	RefSeq	gene	2437	3288	.	-	.	ID=gene-RM680_RS11840;Name=RM680_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11840;old_locus_tag=RM680_11860
NZ_JAVRJI010000028.1	Protein Homology	CDS	2437	3288	.	-	0	ID=cds-WP_031879624.1;Parent=gene-RM680_RS11840;Dbxref=GenBank:WP_031879624.1;Name=WP_031879624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366464.1;locus_tag=RM680_RS11840;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WP_031879624.1;transl_table=11
NZ_JAVRJI010000028.1	RefSeq	gene	3275	3484	.	-	.	ID=gene-RM680_RS11845;Name=RM680_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11845;old_locus_tag=RM680_11865
NZ_JAVRJI010000028.1	GeneMarkS-2+	CDS	3275	3484	.	-	0	ID=cds-WP_193620745.1;Parent=gene-RM680_RS11845;Dbxref=GenBank:WP_193620745.1;Name=WP_193620745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=RM680_RS11845;product=hypothetical protein;protein_id=WP_193620745.1;transl_table=11
NZ_JAVRJI010000028.1	RefSeq	gene	3466	3849	.	-	.	ID=gene-RM680_RS11850;Name=RM680_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11850;old_locus_tag=RM680_11870
NZ_JAVRJI010000028.1	Protein Homology	CDS	3466	3849	.	-	0	ID=cds-WP_145351405.1;Parent=gene-RM680_RS11850;Dbxref=GenBank:WP_145351405.1;Name=WP_145351405.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449121.1;locus_tag=RM680_RS11850;product=plasmid mobilization protein;protein_id=WP_145351405.1;transl_table=11
NZ_JAVRJI010000028.1	RefSeq	gene	4084	5463	.	-	.	ID=gene-RM680_RS11855;Name=tet(K);gbkey=Gene;gene=tet(K);gene_biotype=protein_coding;locus_tag=RM680_RS11855;old_locus_tag=RM680_11875
NZ_JAVRJI010000028.1	Protein Homology	CDS	4084	5463	.	-	0	ID=cds-WP_002455970.1;Parent=gene-RM680_RS11855;Dbxref=GenBank:WP_002455970.1;Name=WP_002455970.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(K);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492283.1;locus_tag=RM680_RS11855;product=tetracycline efflux MFS transporter Tet(K);protein_id=WP_002455970.1;transl_table=11
##sequence-region NZ_JAVRJI010000029.1 1 3403
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000029.1	RefSeq	region	1	3403	.	+	.	ID=NZ_JAVRJI010000029.1:1..3403;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000029.1	RefSeq	gene	232	789	.	-	.	ID=gene-RM680_RS11860;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=RM680_RS11860;old_locus_tag=RM680_11880
NZ_JAVRJI010000029.1	Protein Homology	CDS	232	789	.	-	0	ID=cds-WP_011082818.1;Parent=gene-RM680_RS11860;Dbxref=GenBank:WP_011082818.1;Name=WP_011082818.1;Ontology_term=GO:0042823,GO:0004359,GO:0016884;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082818.1;locus_tag=RM680_RS11860;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_011082818.1;transl_table=11
NZ_JAVRJI010000029.1	RefSeq	gene	792	1679	.	-	.	ID=gene-RM680_RS11865;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=RM680_RS11865;old_locus_tag=RM680_11885
NZ_JAVRJI010000029.1	Protein Homology	CDS	792	1679	.	-	0	ID=cds-WP_001830030.1;Parent=gene-RM680_RS11865;Dbxref=GenBank:WP_001830030.1;Name=WP_001830030.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=RM680_RS11865;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_001830030.1;transl_table=11
NZ_JAVRJI010000029.1	RefSeq	gene	1776	3140	.	+	.	ID=gene-RM680_RS11870;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=RM680_RS11870;old_locus_tag=RM680_11890
NZ_JAVRJI010000029.1	Protein Homology	CDS	1776	3140	.	+	0	ID=cds-WP_001830028.1;Parent=gene-RM680_RS11870;Dbxref=GenBank:WP_001830028.1;Name=WP_001830028.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456025.1;locus_tag=RM680_RS11870;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_001830028.1;transl_table=11
##sequence-region NZ_JAVRJI010000030.1 1 2574
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000030.1	RefSeq	region	1	2574	.	+	.	ID=NZ_JAVRJI010000030.1:1..2574;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000030.1	RefSeq	pseudogene	1	2574	.	-	.	ID=gene-RM680_RS11875;Name=RM680_RS11875;end_range=2574,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS11875;old_locus_tag=RM680_11895;partial=true;pseudo=true;start_range=.,1
NZ_JAVRJI010000030.1	Protein Homology	CDS	1	2574	.	-	0	ID=cds-RM680_RS11875;Parent=gene-RM680_RS11875;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=2574,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959332.1;locus_tag=RM680_RS11875;partial=true;product=adhesin;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_JAVRJI010000031.1 1 2192
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000031.1	RefSeq	region	1	2192	.	+	.	ID=NZ_JAVRJI010000031.1:1..2192;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000031.1	RefSeq	pseudogene	1	2192	.	-	.	ID=gene-RM680_RS11880;Name=aap;end_range=2192,.;gbkey=Gene;gene=aap;gene_biotype=pseudogene;locus_tag=RM680_RS11880;old_locus_tag=RM680_11900;partial=true;pseudo=true;start_range=.,1
NZ_JAVRJI010000031.1	Protein Homology	CDS	1	2192	.	-	0	ID=cds-RM680_RS11880;Parent=gene-RM680_RS11880;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=2192,.;gbkey=CDS;gene=aap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_217283962.1;locus_tag=RM680_RS11880;partial=true;product=accumulation-associated protein Aap;pseudo=true;start_range=.,1;transl_table=11
##sequence-region NZ_JAVRJI010000032.1 1 1921
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000032.1	RefSeq	region	1	1921	.	+	.	ID=NZ_JAVRJI010000032.1:1..1921;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000032.1	RefSeq	gene	1	1921	.	-	.	ID=gene-RM680_RS11885;Name=RM680_RS11885;end_range=1921,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM680_RS11885;old_locus_tag=RM680_11905;partial=true;start_range=.,1
NZ_JAVRJI010000032.1	cmsearch	rRNA	1	1921	.	-	.	ID=rna-RM680_RS11885;Parent=gene-RM680_RS11885;Dbxref=RFAM:RF02541;end_range=1921,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS11885;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JAVRJI010000032.1	cmsearch	exon	1	1921	.	-	.	ID=exon-RM680_RS11885-1;Parent=rna-RM680_RS11885;Dbxref=RFAM:RF02541;end_range=1921,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS11885;partial=true;product=23S ribosomal RNA;start_range=.,1
##sequence-region NZ_JAVRJI010000033.1 1 1563
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000033.1	RefSeq	region	1	1563	.	+	.	ID=NZ_JAVRJI010000033.1:1..1563;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000033.1	RefSeq	gene	11	1561	.	-	.	ID=gene-RM680_RS11890;Name=RM680_RS11890;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM680_RS11890;old_locus_tag=RM680_11910
NZ_JAVRJI010000033.1	cmsearch	rRNA	11	1561	.	-	.	ID=rna-RM680_RS11890;Parent=gene-RM680_RS11890;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS11890;product=16S ribosomal RNA
NZ_JAVRJI010000033.1	cmsearch	exon	11	1561	.	-	.	ID=exon-RM680_RS11890-1;Parent=rna-RM680_RS11890;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS11890;product=16S ribosomal RNA
##sequence-region NZ_JAVRJI010000034.1 1 1535
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000034.1	RefSeq	region	1	1535	.	+	.	ID=NZ_JAVRJI010000034.1:1..1535;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000034.1	RefSeq	gene	528	1535	.	-	.	ID=gene-RM680_RS11895;Name=mobV;end_range=1535,.;gbkey=Gene;gene=mobV;gene_biotype=protein_coding;locus_tag=RM680_RS11895;old_locus_tag=RM680_11915;partial=true
NZ_JAVRJI010000034.1	Protein Homology	CDS	528	1535	.	-	0	ID=cds-WP_311563656.1;Parent=gene-RM680_RS11895;Dbxref=GenBank:WP_311563656.1;Name=WP_311563656.1;Ontology_term=GO:0006310,GO:0003677;end_range=1535,.;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002958641.1;locus_tag=RM680_RS11895;partial=true;product=MobV family relaxase;protein_id=WP_311563656.1;transl_table=11
##sequence-region NZ_JAVRJI010000035.1 1 1261
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000035.1	RefSeq	region	1	1261	.	+	.	ID=NZ_JAVRJI010000035.1:1..1261;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000035.1	RefSeq	pseudogene	1	194	.	+	.	ID=gene-RM680_RS11900;Name=RM680_RS11900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS11900;old_locus_tag=RM680_11920;partial=true;pseudo=true;start_range=.,1
NZ_JAVRJI010000035.1	Protein Homology	CDS	1	194	.	+	2	ID=cds-RM680_RS11900;Parent=gene-RM680_RS11900;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456291.1;locus_tag=RM680_RS11900;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11
NZ_JAVRJI010000035.1	RefSeq	pseudogene	848	1261	.	+	.	ID=gene-RM680_RS11905;Name=RM680_RS11905;end_range=1261,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS11905;old_locus_tag=RM680_11925;partial=true;pseudo=true
NZ_JAVRJI010000035.1	Protein Homology	CDS	848	1261	.	+	0	ID=cds-RM680_RS11905;Parent=gene-RM680_RS11905;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1261,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503823.1;locus_tag=RM680_RS11905;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
##sequence-region NZ_JAVRJI010000036.1 1 876
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000036.1	RefSeq	region	1	876	.	+	.	ID=NZ_JAVRJI010000036.1:1..876;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000036.1	RefSeq	gene	1	733	.	+	.	ID=gene-RM680_RS11910;Name=RM680_RS11910;gbkey=Gene;gene_biotype=rRNA;locus_tag=RM680_RS11910;old_locus_tag=RM680_11930;partial=true;start_range=.,1
NZ_JAVRJI010000036.1	cmsearch	rRNA	1	733	.	+	.	ID=rna-RM680_RS11910;Parent=gene-RM680_RS11910;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS11910;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JAVRJI010000036.1	cmsearch	exon	1	733	.	+	.	ID=exon-RM680_RS11910-1;Parent=rna-RM680_RS11910;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS11910;partial=true;product=23S ribosomal RNA;start_range=.,1
NZ_JAVRJI010000036.1	RefSeq	gene	804	876	.	+	.	ID=gene-RM680_RS11915;Name=rrf;end_range=876,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=RM680_RS11915;old_locus_tag=RM680_11935;partial=true
NZ_JAVRJI010000036.1	cmsearch	rRNA	804	876	.	+	.	ID=rna-RM680_RS11915;Parent=gene-RM680_RS11915;Dbxref=RFAM:RF00001;end_range=876,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS11915;partial=true;product=5S ribosomal RNA
NZ_JAVRJI010000036.1	cmsearch	exon	804	876	.	+	.	ID=exon-RM680_RS11915-1;Parent=rna-RM680_RS11915;Dbxref=RFAM:RF00001;end_range=876,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=RM680_RS11915;partial=true;product=5S ribosomal RNA
##sequence-region NZ_JAVRJI010000037.1 1 766
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000037.1	RefSeq	region	1	766	.	+	.	ID=NZ_JAVRJI010000037.1:1..766;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000037.1	RefSeq	gene	24	766	.	+	.	ID=gene-RM680_RS11920;Name=RM680_RS11920;end_range=766,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=RM680_RS11920;old_locus_tag=RM680_11940;partial=true
NZ_JAVRJI010000037.1	Protein Homology	CDS	24	766	.	+	0	ID=cds-WP_002470670.1;Parent=gene-RM680_RS11920;Dbxref=GenBank:WP_002470670.1;Name=WP_002470670.1;Ontology_term=GO:0004040,GO:0042834;end_range=766,.;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501032.1;locus_tag=RM680_RS11920;partial=true;product=CHAP domain-containing protein;protein_id=WP_002470670.1;transl_table=11
##sequence-region NZ_JAVRJI010000038.1 1 738
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000038.1	RefSeq	region	1	738	.	+	.	ID=NZ_JAVRJI010000038.1:1..738;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000038.1	RefSeq	pseudogene	17	738	.	+	.	ID=gene-RM680_RS11925;Name=RM680_RS11925;end_range=738,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS11925;old_locus_tag=RM680_11945;partial=true;pseudo=true
NZ_JAVRJI010000038.1	Protein Homology	CDS	17	738	.	+	0	ID=cds-RM680_RS11925;Parent=gene-RM680_RS11925;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=738,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071813258.1;locus_tag=RM680_RS11925;partial=true;product=IS110-like element ISSep2 family transposase;pseudo=true;transl_table=11
##sequence-region NZ_JAVRJI010000039.1 1 698
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000039.1	RefSeq	region	1	698	.	+	.	ID=NZ_JAVRJI010000039.1:1..698;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000039.1	RefSeq	gene	88	163	.	-	.	ID=gene-RM680_RS11930;Name=RM680_RS11930;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS11930;old_locus_tag=RM680_11950
NZ_JAVRJI010000039.1	tRNAscan-SE	tRNA	88	163	.	-	.	ID=rna-RM680_RS11930;Parent=gene-RM680_RS11930;anticodon=(pos:complement(128..130));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11930;product=tRNA-Ala
NZ_JAVRJI010000039.1	tRNAscan-SE	exon	88	163	.	-	.	ID=exon-RM680_RS11930-1;Parent=rna-RM680_RS11930;anticodon=(pos:complement(128..130));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11930;product=tRNA-Ala
NZ_JAVRJI010000039.1	RefSeq	gene	178	251	.	-	.	ID=gene-RM680_RS11935;Name=RM680_RS11935;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS11935;old_locus_tag=RM680_11955
NZ_JAVRJI010000039.1	tRNAscan-SE	tRNA	178	251	.	-	.	ID=rna-RM680_RS11935;Parent=gene-RM680_RS11935;anticodon=(pos:complement(215..217));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11935;product=tRNA-Pro
NZ_JAVRJI010000039.1	tRNAscan-SE	exon	178	251	.	-	.	ID=exon-RM680_RS11935-1;Parent=rna-RM680_RS11935;anticodon=(pos:complement(215..217));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11935;product=tRNA-Pro
NZ_JAVRJI010000039.1	RefSeq	gene	278	354	.	-	.	ID=gene-RM680_RS11940;Name=RM680_RS11940;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS11940;old_locus_tag=RM680_11960
NZ_JAVRJI010000039.1	tRNAscan-SE	tRNA	278	354	.	-	.	ID=rna-RM680_RS11940;Parent=gene-RM680_RS11940;anticodon=(pos:complement(318..320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11940;product=tRNA-Arg
NZ_JAVRJI010000039.1	tRNAscan-SE	exon	278	354	.	-	.	ID=exon-RM680_RS11940-1;Parent=rna-RM680_RS11940;anticodon=(pos:complement(318..320));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11940;product=tRNA-Arg
NZ_JAVRJI010000039.1	RefSeq	gene	367	455	.	-	.	ID=gene-RM680_RS11945;Name=RM680_RS11945;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS11945;old_locus_tag=RM680_11965
NZ_JAVRJI010000039.1	tRNAscan-SE	tRNA	367	455	.	-	.	ID=rna-RM680_RS11945;Parent=gene-RM680_RS11945;anticodon=(pos:complement(419..421));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11945;product=tRNA-Leu
NZ_JAVRJI010000039.1	tRNAscan-SE	exon	367	455	.	-	.	ID=exon-RM680_RS11945-1;Parent=rna-RM680_RS11945;anticodon=(pos:complement(419..421));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11945;product=tRNA-Leu
NZ_JAVRJI010000039.1	RefSeq	gene	467	541	.	-	.	ID=gene-RM680_RS11950;Name=RM680_RS11950;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS11950;old_locus_tag=RM680_11970
NZ_JAVRJI010000039.1	tRNAscan-SE	tRNA	467	541	.	-	.	ID=rna-RM680_RS11950;Parent=gene-RM680_RS11950;anticodon=(pos:complement(507..509));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11950;product=tRNA-Gly
NZ_JAVRJI010000039.1	tRNAscan-SE	exon	467	541	.	-	.	ID=exon-RM680_RS11950-1;Parent=rna-RM680_RS11950;anticodon=(pos:complement(507..509));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11950;product=tRNA-Gly
NZ_JAVRJI010000039.1	RefSeq	gene	560	632	.	-	.	ID=gene-RM680_RS11955;Name=RM680_RS11955;gbkey=Gene;gene_biotype=tRNA;locus_tag=RM680_RS11955;old_locus_tag=RM680_11975
NZ_JAVRJI010000039.1	tRNAscan-SE	tRNA	560	632	.	-	.	ID=rna-RM680_RS11955;Parent=gene-RM680_RS11955;anticodon=(pos:complement(597..599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11955;product=tRNA-Lys
NZ_JAVRJI010000039.1	tRNAscan-SE	exon	560	632	.	-	.	ID=exon-RM680_RS11955-1;Parent=rna-RM680_RS11955;anticodon=(pos:complement(597..599));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=RM680_RS11955;product=tRNA-Lys
##sequence-region NZ_JAVRJI010000040.1 1 598
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1282
NZ_JAVRJI010000040.1	RefSeq	region	1	598	.	+	.	ID=NZ_JAVRJI010000040.1:1..598;Dbxref=taxon:1282;collection-date=2022-06-22;country=South Africa: Cape Town;gbkey=Src;genome=genomic;isolation-source=healthy nasal swab;mol_type=genomic DNA;nat-host=pig;strain=ST1221
NZ_JAVRJI010000040.1	RefSeq	pseudogene	1	555	.	+	.	ID=gene-RM680_RS11960;Name=RM680_RS11960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=RM680_RS11960;old_locus_tag=RM680_11980;partial=true;pseudo=true;start_range=.,1
NZ_JAVRJI010000040.1	Protein Homology	CDS	1	555	.	+	0	ID=cds-RM680_RS11960;Parent=gene-RM680_RS11960;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_071813258.1;locus_tag=RM680_RS11960;partial=true;product=IS110-like element ISSep2 family transposase;pseudo=true;start_range=.,1;transl_table=11
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