##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM3506628v1 #!genome-build-accession NCBI_Assembly:GCF_035066285.1 #!annotation-date 03/24/2026 12:24:00 #!annotation-source NCBI RefSeq GCF_035066285.1-RS_2026_03_24 ##sequence-region NZ_JAVXZI010000001.1 1 461542 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000001.1 RefSeq region 1 461542 . + . ID=NZ_JAVXZI010000001.1:1..461542;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000001.1 RefSeq gene 1 204 . - . ID=gene-VMS06_RS00005;Name=VMS06_RS00005;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS00005;partial=true;start_range=.,1 NZ_JAVXZI010000001.1 cmsearch rRNA 1 204 . - . ID=rna-VMS06_RS00005;Parent=gene-VMS06_RS00005;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS00005;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000001.1 cmsearch exon 1 204 . - . ID=exon-VMS06_RS00005-1;Parent=rna-VMS06_RS00005;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS00005;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000001.1 RefSeq gene 631 3204 . - . ID=gene-VMS06_RS00010;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=VMS06_RS00010 NZ_JAVXZI010000001.1 Protein Homology CDS 631 3204 . - 0 ID=cds-WP_323630603.1;Parent=gene-VMS06_RS00010;Dbxref=GenBank:WP_323630603.1;Name=WP_323630603.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=VMS06_RS00010;product=ATP-dependent chaperone ClpB;protein_id=WP_323630603.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 3334 4065 . - . ID=gene-VMS06_RS00015;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=VMS06_RS00015 NZ_JAVXZI010000001.1 Protein Homology CDS 3334 4065 . - 0 ID=cds-WP_063147485.1;Parent=gene-VMS06_RS00015;Dbxref=GenBank:WP_063147485.1;Name=WP_063147485.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417084.1;locus_tag=VMS06_RS00015;product=purine nucleoside phosphorylase YfiH;protein_id=WP_063147485.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 4062 5042 . - . ID=gene-VMS06_RS00020;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=VMS06_RS00020 NZ_JAVXZI010000001.1 Protein Homology CDS 4062 5042 . - 0 ID=cds-WP_022649057.1;Parent=gene-VMS06_RS00020;Dbxref=GenBank:WP_022649057.1;Name=WP_022649057.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=VMS06_RS00020;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_022649057.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 5174 5911 . + . ID=gene-VMS06_RS00025;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=VMS06_RS00025 NZ_JAVXZI010000001.1 Protein Homology CDS 5174 5911 . + 0 ID=cds-WP_003863164.1;Parent=gene-VMS06_RS00025;Dbxref=GenBank:WP_003863164.1;Name=WP_003863164.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461594.1;locus_tag=VMS06_RS00025;product=outer membrane protein assembly factor BamD;protein_id=WP_003863164.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 6179 6520 . + . ID=gene-VMS06_RS00030;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=VMS06_RS00030 NZ_JAVXZI010000001.1 Protein Homology CDS 6179 6520 . + 0 ID=cds-WP_006811628.1;Parent=gene-VMS06_RS00030;Dbxref=GenBank:WP_006811628.1;Name=WP_006811628.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311487.1;locus_tag=VMS06_RS00030;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_006811628.1;transl_table=11 NZ_JAVXZI010000001.1 cmsearch sequence_feature 6624 6749 . + . ID=id-NZ_JAVXZI010000001.1:6624..6749;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVXZI010000001.1 RefSeq gene 6625 6672 . + . ID=gene-VMS06_RS00035;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=VMS06_RS00035 NZ_JAVXZI010000001.1 Protein Homology CDS 6625 6672 . + 0 ID=cds-WP_100229775.1;Parent=gene-VMS06_RS00035;Dbxref=GenBank:WP_100229775.1;Name=WP_100229775.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311488.1;locus_tag=VMS06_RS00035;product=pheA operon leader peptide PheL;protein_id=WP_100229775.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 6780 7940 . + . ID=gene-VMS06_RS00040;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=VMS06_RS00040 NZ_JAVXZI010000001.1 Protein Homology CDS 6780 7940 . + 0 ID=cds-WP_023306733.1;Parent=gene-VMS06_RS00040;Dbxref=GenBank:WP_023306733.1;Name=WP_023306733.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130419.1;locus_tag=VMS06_RS00040;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_023306733.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 7937 8809 . - . ID=gene-VMS06_RS00045;Name=VMS06_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00045 NZ_JAVXZI010000001.1 Protein Homology CDS 7937 8809 . - 0 ID=cds-WP_058676703.1;Parent=gene-VMS06_RS00045;Dbxref=GenBank:WP_058676703.1;Name=WP_058676703.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863157.1;locus_tag=VMS06_RS00045;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_058676703.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 8954 9157 . - . ID=gene-VMS06_RS00050;Name=VMS06_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00050 NZ_JAVXZI010000001.1 Protein Homology CDS 8954 9157 . - 0 ID=cds-WP_071788728.1;Parent=gene-VMS06_RS00050;Dbxref=GenBank:WP_071788728.1;Name=WP_071788728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016153611.1;locus_tag=VMS06_RS00050;product=ogr/Delta-like zinc finger family protein;protein_id=WP_071788728.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 9230 9658 . - . ID=gene-VMS06_RS00055;Name=VMS06_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00055 NZ_JAVXZI010000001.1 Protein Homology CDS 9230 9658 . - 0 ID=cds-WP_023298399.1;Parent=gene-VMS06_RS00055;Dbxref=GenBank:WP_023298399.1;Name=WP_023298399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016169781.1;locus_tag=VMS06_RS00055;product=WapI family immunity protein;protein_id=WP_023298399.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 9669 10340 . - . ID=gene-VMS06_RS00060;Name=VMS06_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00060 NZ_JAVXZI010000001.1 Protein Homology CDS 9669 10340 . - 0 ID=cds-WP_023298400.1;Parent=gene-VMS06_RS00060;Dbxref=GenBank:WP_023298400.1;Name=WP_023298400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010258703.1;locus_tag=VMS06_RS00060;product=hypothetical protein;protein_id=WP_023298400.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 10430 10768 . - . ID=gene-VMS06_RS00065;Name=VMS06_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00065 NZ_JAVXZI010000001.1 Protein Homology CDS 10430 10768 . - 0 ID=cds-WP_237764988.1;Parent=gene-VMS06_RS00065;Dbxref=GenBank:WP_237764988.1;Name=WP_237764988.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049199.2;locus_tag=VMS06_RS00065;product=DUF7415 domain-containing protein;protein_id=WP_237764988.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq pseudogene 10842 11444 . + . ID=gene-VMS06_RS00070;Name=VMS06_RS00070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS00070;partial=true;pseudo=true;start_range=.,10842 NZ_JAVXZI010000001.1 Protein Homology CDS 10842 11444 . + 0 ID=cds-VMS06_RS00070;Parent=gene-VMS06_RS00070;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000985242.1;locus_tag=VMS06_RS00070;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,10842;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 11630 12751 . - . ID=gene-VMS06_RS00075;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=VMS06_RS00075 NZ_JAVXZI010000001.1 Protein Homology CDS 11630 12751 . - 0 ID=cds-WP_022649060.1;Parent=gene-VMS06_RS00075;Dbxref=GenBank:WP_022649060.1;Name=WP_022649060.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=L-tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311490.1;locus_tag=VMS06_RS00075;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_022649060.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 12762 13832 . - . ID=gene-VMS06_RS00080;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=VMS06_RS00080 NZ_JAVXZI010000001.1 Protein Homology CDS 12762 13832 . - 0 ID=cds-WP_006811632.1;Parent=gene-VMS06_RS00080;Dbxref=GenBank:WP_006811632.1;Name=WP_006811632.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461600.1;locus_tag=VMS06_RS00080;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_006811632.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 14311 14847 . + . ID=gene-VMS06_RS00085;Name=yfiR;gbkey=Gene;gene=yfiR;gene_biotype=protein_coding;locus_tag=VMS06_RS00085 NZ_JAVXZI010000001.1 Protein Homology CDS 14311 14847 . + 0 ID=cds-WP_063146946.1;Parent=gene-VMS06_RS00085;Dbxref=GenBank:WP_063146946.1;Name=WP_063146946.1;Ontology_term=GO:0007165,GO:0030288;gbkey=CDS;gene=yfiR;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863149.1;locus_tag=VMS06_RS00085;product=regulatory sequestration protein YfiR;protein_id=WP_063146946.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 14840 16060 . + . ID=gene-VMS06_RS00090;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;gene_synonym=yfiN;locus_tag=VMS06_RS00090 NZ_JAVXZI010000001.1 Protein Homology CDS 14840 16060 . + 0 ID=cds-WP_045308387.1;Parent=gene-VMS06_RS00090;Dbxref=GenBank:WP_045308387.1;Name=WP_045308387.1;Ontology_term=GO:0007165,GO:0052621,GO:0005886;gbkey=CDS;gene=dgcN;go_component=plasma membrane|0005886||IEA;go_function=diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071404.1;locus_tag=VMS06_RS00090;product=diguanylate cyclase DgcN/YfiN;protein_id=WP_045308387.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 16073 16555 . + . ID=gene-VMS06_RS00095;Name=VMS06_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00095 NZ_JAVXZI010000001.1 Protein Homology CDS 16073 16555 . + 0 ID=cds-WP_023298405.1;Parent=gene-VMS06_RS00095;Dbxref=GenBank:WP_023298405.1;Name=WP_023298405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228296.1;locus_tag=VMS06_RS00095;product=OmpA family protein;protein_id=WP_023298405.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 16558 17928 . - . ID=gene-VMS06_RS00100;Name=VMS06_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00100 NZ_JAVXZI010000001.1 Protein Homology CDS 16558 17928 . - 0 ID=cds-WP_063147484.1;Parent=gene-VMS06_RS00100;Dbxref=GenBank:WP_063147484.1;Name=WP_063147484.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832947.1;locus_tag=VMS06_RS00100;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_063147484.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 17967 18371 . - . ID=gene-VMS06_RS00105;Name=VMS06_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00105 NZ_JAVXZI010000001.1 Protein Homology CDS 17967 18371 . - 0 ID=cds-WP_022649065.1;Parent=gene-VMS06_RS00105;Dbxref=GenBank:WP_022649065.1;Name=WP_022649065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692856.1;locus_tag=VMS06_RS00105;product=DUF2946 domain-containing protein;protein_id=WP_022649065.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 18504 18851 . - . ID=gene-VMS06_RS00110;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=VMS06_RS00110 NZ_JAVXZI010000001.1 Protein Homology CDS 18504 18851 . - 0 ID=cds-WP_002914145.1;Parent=gene-VMS06_RS00110;Dbxref=GenBank:WP_002914145.1;Name=WP_002914145.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=VMS06_RS00110;product=50S ribosomal protein L19;protein_id=WP_002914145.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 18895 19662 . - . ID=gene-VMS06_RS00115;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=VMS06_RS00115 NZ_JAVXZI010000001.1 Protein Homology CDS 18895 19662 . - 0 ID=cds-WP_003863138.1;Parent=gene-VMS06_RS00115;Dbxref=GenBank:WP_003863138.1;Name=WP_003863138.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311497.1;locus_tag=VMS06_RS00115;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_003863138.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 19694 20233 . - . ID=gene-VMS06_RS00120;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=VMS06_RS00120 NZ_JAVXZI010000001.1 Protein Homology CDS 19694 20233 . - 0 ID=cds-WP_003863136.1;Parent=gene-VMS06_RS00120;Dbxref=GenBank:WP_003863136.1;Name=WP_003863136.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178053.1;locus_tag=VMS06_RS00120;product=ribosome maturation factor RimM;protein_id=WP_003863136.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 20249 20497 . - . ID=gene-VMS06_RS00125;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=VMS06_RS00125 NZ_JAVXZI010000001.1 Protein Homology CDS 20249 20497 . - 0 ID=cds-WP_022649067.1;Parent=gene-VMS06_RS00125;Dbxref=GenBank:WP_022649067.1;Name=WP_022649067.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=VMS06_RS00125;product=30S ribosomal protein S16;protein_id=WP_022649067.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 20614 21975 . - . ID=gene-VMS06_RS00130;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=VMS06_RS00130 NZ_JAVXZI010000001.1 Protein Homology CDS 20614 21975 . - 0 ID=cds-WP_003863132.1;Parent=gene-VMS06_RS00130;Dbxref=GenBank:WP_003863132.1;Name=WP_003863132.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=VMS06_RS00130;product=signal recognition particle protein;protein_id=WP_003863132.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 22142 22933 . + . ID=gene-VMS06_RS00135;Name=VMS06_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00135 NZ_JAVXZI010000001.1 Protein Homology CDS 22142 22933 . + 0 ID=cds-WP_014832951.1;Parent=gene-VMS06_RS00135;Dbxref=GenBank:WP_014832951.1;Name=WP_014832951.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365129.1;locus_tag=VMS06_RS00135;product=cytochrome C assembly family protein;protein_id=WP_014832951.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 22953 24239 . + . ID=gene-VMS06_RS00140;Name=VMS06_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00140 NZ_JAVXZI010000001.1 Protein Homology CDS 22953 24239 . + 0 ID=cds-WP_026094274.1;Parent=gene-VMS06_RS00140;Dbxref=GenBank:WP_026094274.1;Name=WP_026094274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=VMS06_RS00140;product=HlyC/CorC family transporter;protein_id=WP_026094274.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 24292 24885 . - . ID=gene-VMS06_RS00145;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=VMS06_RS00145 NZ_JAVXZI010000001.1 Protein Homology CDS 24292 24885 . - 0 ID=cds-WP_003863126.1;Parent=gene-VMS06_RS00145;Dbxref=GenBank:WP_003863126.1;Name=WP_003863126.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311503.1;locus_tag=VMS06_RS00145;product=nucleotide exchange factor GrpE;protein_id=WP_003863126.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 25008 25886 . + . ID=gene-VMS06_RS00150;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=VMS06_RS00150 NZ_JAVXZI010000001.1 Protein Homology CDS 25008 25886 . + 0 ID=cds-WP_022649070.1;Parent=gene-VMS06_RS00150;Dbxref=GenBank:WP_022649070.1;Name=WP_022649070.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=VMS06_RS00150;product=NAD(+) kinase;protein_id=WP_022649070.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 25972 27633 . + . ID=gene-VMS06_RS00155;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=VMS06_RS00155 NZ_JAVXZI010000001.1 Protein Homology CDS 25972 27633 . + 0 ID=cds-WP_022649071.1;Parent=gene-VMS06_RS00155;Dbxref=GenBank:WP_022649071.1;Name=WP_022649071.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461614.1;locus_tag=VMS06_RS00155;product=DNA repair protein RecN;protein_id=WP_022649071.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 27772 28110 . + . ID=gene-VMS06_RS00160;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=VMS06_RS00160 NZ_JAVXZI010000001.1 Protein Homology CDS 27772 28110 . + 0 ID=cds-WP_003863121.1;Parent=gene-VMS06_RS00160;Dbxref=GenBank:WP_003863121.1;Name=WP_003863121.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461615.1;locus_tag=VMS06_RS00160;product=outer membrane protein assembly factor BamE;protein_id=WP_003863121.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 28172 28459 . - . ID=gene-VMS06_RS00165;Name=VMS06_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00165 NZ_JAVXZI010000001.1 Protein Homology CDS 28172 28459 . - 0 ID=cds-WP_003863119.1;Parent=gene-VMS06_RS00165;Dbxref=GenBank:WP_003863119.1;Name=WP_003863119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883907.1;locus_tag=VMS06_RS00165;product=RnfH family protein;protein_id=WP_003863119.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 28449 28886 . - . ID=gene-VMS06_RS00170;Name=VMS06_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00170 NZ_JAVXZI010000001.1 Protein Homology CDS 28449 28886 . - 0 ID=cds-WP_003863117.1;Parent=gene-VMS06_RS00170;Dbxref=GenBank:WP_003863117.1;Name=WP_003863117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228360.1;locus_tag=VMS06_RS00170;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_003863117.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 29043 29525 . + . ID=gene-VMS06_RS00175;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=VMS06_RS00175 NZ_JAVXZI010000001.1 Protein Homology CDS 29043 29525 . + 0 ID=cds-WP_003863115.1;Parent=gene-VMS06_RS00175;Dbxref=GenBank:WP_003863115.1;Name=WP_003863115.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461618.1;locus_tag=VMS06_RS00175;product=SsrA-binding protein SmpB;protein_id=WP_003863115.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 29615 29978 . + . ID=gene-VMS06_RS00180;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=VMS06_RS00180 NZ_JAVXZI010000001.1 cmsearch tmRNA 29615 29978 . + . ID=rna-VMS06_RS00180;Parent=gene-VMS06_RS00180;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS00180;product=transfer-messenger RNA NZ_JAVXZI010000001.1 cmsearch exon 29615 29978 . + . ID=exon-VMS06_RS00180-1;Parent=rna-VMS06_RS00180;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS00180;product=transfer-messenger RNA NZ_JAVXZI010000001.1 RefSeq gene 30096 30314 . - . ID=gene-VMS06_RS00185;Name=VMS06_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00185 NZ_JAVXZI010000001.1 Protein Homology CDS 30096 30314 . - 0 ID=cds-WP_045334934.1;Parent=gene-VMS06_RS00185;Dbxref=GenBank:WP_045334934.1;Name=WP_045334934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461622.1;locus_tag=VMS06_RS00185;product=ogr/Delta-like zinc finger family protein;protein_id=WP_045334934.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 30383 31483 . - . ID=gene-VMS06_RS00190;Name=VMS06_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00190 NZ_JAVXZI010000001.1 Protein Homology CDS 30383 31483 . - 0 ID=cds-WP_063255708.1;Parent=gene-VMS06_RS00190;Dbxref=GenBank:WP_063255708.1;Name=WP_063255708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461623.1;locus_tag=VMS06_RS00190;product=phage late control D family protein;protein_id=WP_063255708.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 31480 31965 . - . ID=gene-VMS06_RS00195;Name=VMS06_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00195 NZ_JAVXZI010000001.1 Protein Homology CDS 31480 31965 . - 0 ID=cds-WP_032610580.1;Parent=gene-VMS06_RS00195;Dbxref=GenBank:WP_032610580.1;Name=WP_032610580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461624.1;locus_tag=VMS06_RS00195;product=phage tail protein;protein_id=WP_032610580.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 31965 35399 . - . ID=gene-VMS06_RS00200;Name=VMS06_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00200 NZ_JAVXZI010000001.1 Protein Homology CDS 31965 35399 . - 0 ID=cds-WP_063255709.1;Parent=gene-VMS06_RS00200;Dbxref=GenBank:WP_063255709.1;Name=WP_063255709.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384020.1;locus_tag=VMS06_RS00200;product=phage tail tape measure protein;protein_id=WP_063255709.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 35392 35511 . - . ID=gene-VMS06_RS00205;Name=VMS06_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00205 NZ_JAVXZI010000001.1 Protein Homology CDS 35392 35511 . - 0 ID=cds-WP_007848878.1;Parent=gene-VMS06_RS00205;Dbxref=GenBank:WP_007848878.1;Name=WP_007848878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226046.1;locus_tag=VMS06_RS00205;product=GpE family phage tail protein;protein_id=WP_007848878.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 35526 35828 . - . ID=gene-VMS06_RS00210;Name=VMS06_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00210 NZ_JAVXZI010000001.1 Protein Homology CDS 35526 35828 . - 0 ID=cds-WP_014884889.1;Parent=gene-VMS06_RS00210;Dbxref=GenBank:WP_014884889.1;Name=WP_014884889.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461627.1;locus_tag=VMS06_RS00210;product=phage tail assembly protein;protein_id=WP_014884889.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 35883 36398 . - . ID=gene-VMS06_RS00215;Name=VMS06_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00215 NZ_JAVXZI010000001.1 Protein Homology CDS 35883 36398 . - 0 ID=cds-WP_007848874.1;Parent=gene-VMS06_RS00215;Dbxref=GenBank:WP_007848874.1;Name=WP_007848874.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461628.1;locus_tag=VMS06_RS00215;product=phage major tail tube protein;protein_id=WP_007848874.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 36408 37580 . - . ID=gene-VMS06_RS00220;Name=VMS06_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00220 NZ_JAVXZI010000001.1 Protein Homology CDS 36408 37580 . - 0 ID=cds-WP_007848866.1;Parent=gene-VMS06_RS00220;Dbxref=GenBank:WP_007848866.1;Name=WP_007848866.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461629.1;locus_tag=VMS06_RS00220;product=phage tail sheath protein;protein_id=WP_007848866.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 37661 38413 . - . ID=gene-VMS06_RS00225;Name=VMS06_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00225 NZ_JAVXZI010000001.1 Protein Homology CDS 37661 38413 . - 0 ID=cds-WP_015386375.1;Parent=gene-VMS06_RS00225;Dbxref=GenBank:WP_015386375.1;Name=WP_015386375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441045.1;locus_tag=VMS06_RS00225;product=DNA-methyltransferase;protein_id=WP_015386375.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 38472 38738 . - . ID=gene-VMS06_RS22825;Name=VMS06_RS22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22825 NZ_JAVXZI010000001.1 Protein Homology CDS 38472 38738 . - 0 ID=cds-WP_074144911.1;Parent=gene-VMS06_RS22825;Dbxref=GenBank:WP_074144911.1;Name=WP_074144911.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF014814.7;locus_tag=VMS06_RS22825;product=helix-turn-helix domain-containing protein;protein_id=WP_074144911.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq pseudogene 38715 39058 . - . ID=gene-VMS06_RS22830;Name=VMS06_RS22830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22830;partial=true;pseudo=true;start_range=.,38715 NZ_JAVXZI010000001.1 Protein Homology CDS 38715 39058 . - 0 ID=cds-VMS06_RS22830;Parent=gene-VMS06_RS22830;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012464.7;locus_tag=VMS06_RS22830;partial=true;product=recombinase family protein;pseudo=true;start_range=.,38715;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 39253 39540 . + . ID=gene-VMS06_RS00235;Name=VMS06_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00235 NZ_JAVXZI010000001.1 Protein Homology CDS 39253 39540 . + 0 ID=cds-WP_123922071.1;Parent=gene-VMS06_RS00235;Dbxref=GenBank:WP_123922071.1;Name=WP_123922071.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047045.3;locus_tag=VMS06_RS00235;product=gp53-like domain-containing protein;protein_id=WP_123922071.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 39610 39921 . + . ID=gene-VMS06_RS22845;Name=VMS06_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22845 NZ_JAVXZI010000001.1 Protein Homology CDS 39610 39921 . + 0 ID=cds-WP_395291889.1;Parent=gene-VMS06_RS22845;Dbxref=GenBank:WP_395291889.1;Name=WP_395291889.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047045.3;locus_tag=VMS06_RS22845;product=gp53-like domain-containing protein;protein_id=WP_395291889.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 39948 40268 . + . ID=gene-VMS06_RS00240;Name=VMS06_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00240 NZ_JAVXZI010000001.1 Protein Homology CDS 39948 40268 . + 0 ID=cds-WP_032679844.1;Parent=gene-VMS06_RS00240;Dbxref=GenBank:WP_032679844.1;Name=WP_032679844.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047045.3;locus_tag=VMS06_RS00240;product=gp53-like domain-containing protein;protein_id=WP_032679844.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 40364 40837 . + . ID=gene-VMS06_RS00245;Name=VMS06_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00245 NZ_JAVXZI010000001.1 Protein Homology CDS 40364 40837 . + 0 ID=cds-WP_063255710.1;Parent=gene-VMS06_RS00245;Dbxref=GenBank:WP_063255710.1;Name=WP_063255710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017442275.1;locus_tag=VMS06_RS00245;product=tail fiber assembly protein;protein_id=WP_063255710.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 40893 42311 . - . ID=gene-VMS06_RS00250;Name=VMS06_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00250 NZ_JAVXZI010000001.1 Protein Homology CDS 40893 42311 . - 0 ID=cds-WP_323630604.1;Parent=gene-VMS06_RS00250;Dbxref=GenBank:WP_323630604.1;Name=WP_323630604.1;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104764.1;locus_tag=VMS06_RS00250;product=phage tail protein;protein_id=WP_323630604.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 42308 42913 . - . ID=gene-VMS06_RS00255;Name=VMS06_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00255 NZ_JAVXZI010000001.1 Protein Homology CDS 42308 42913 . - 0 ID=cds-WP_032665791.1;Parent=gene-VMS06_RS00255;Dbxref=GenBank:WP_032665791.1;Name=WP_032665791.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461635.1;locus_tag=VMS06_RS00255;product=phage tail protein I;protein_id=WP_032665791.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 42906 43814 . - . ID=gene-VMS06_RS00260;Name=VMS06_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00260 NZ_JAVXZI010000001.1 Protein Homology CDS 42906 43814 . - 0 ID=cds-WP_063255712.1;Parent=gene-VMS06_RS00260;Dbxref=GenBank:WP_063255712.1;Name=WP_063255712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461636.1;locus_tag=VMS06_RS00260;product=baseplate assembly protein;protein_id=WP_063255712.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 43801 44160 . - . ID=gene-VMS06_RS00265;Name=VMS06_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00265 NZ_JAVXZI010000001.1 Protein Homology CDS 43801 44160 . - 0 ID=cds-WP_015386368.1;Parent=gene-VMS06_RS00265;Dbxref=GenBank:WP_015386368.1;Name=WP_015386368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461637.1;locus_tag=VMS06_RS00265;product=GPW/gp25 family protein;protein_id=WP_015386368.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 44157 44735 . - . ID=gene-VMS06_RS00270;Name=VMS06_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00270 NZ_JAVXZI010000001.1 Protein Homology CDS 44157 44735 . - 0 ID=cds-WP_045261381.1;Parent=gene-VMS06_RS00270;Dbxref=GenBank:WP_045261381.1;Name=WP_045261381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461638.1;locus_tag=VMS06_RS00270;product=phage baseplate assembly protein V;protein_id=WP_045261381.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 44804 45250 . - . ID=gene-VMS06_RS00275;Name=VMS06_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00275 NZ_JAVXZI010000001.1 Protein Homology CDS 44804 45250 . - 0 ID=cds-WP_063255713.1;Parent=gene-VMS06_RS00275;Dbxref=GenBank:WP_063255713.1;Name=WP_063255713.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884897.1;locus_tag=VMS06_RS00275;product=phage virion morphogenesis protein;protein_id=WP_063255713.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 45243 45674 . - . ID=gene-VMS06_RS00280;Name=VMS06_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00280 NZ_JAVXZI010000001.1 Protein Homology CDS 45243 45674 . - 0 ID=cds-WP_014884898.1;Parent=gene-VMS06_RS00280;Dbxref=GenBank:WP_014884898.1;Name=WP_014884898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461640.1;locus_tag=VMS06_RS00280;product=phage tail protein;protein_id=WP_014884898.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 45637 45885 . - . ID=gene-VMS06_RS00285;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=VMS06_RS00285 NZ_JAVXZI010000001.1 Protein Homology CDS 45637 45885 . - 0 ID=cds-WP_223563535.1;Parent=gene-VMS06_RS00285;Dbxref=GenBank:WP_223563535.1;Name=WP_223563535.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461641.1;locus_tag=VMS06_RS00285;product=Rz1-like lysis system protein LysC;protein_id=WP_223563535.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 45770 46198 . - . ID=gene-VMS06_RS00290;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=VMS06_RS00290 NZ_JAVXZI010000001.1 Protein Homology CDS 45770 46198 . - 0 ID=cds-WP_063255714.1;Parent=gene-VMS06_RS00290;Dbxref=GenBank:WP_063255714.1;Name=WP_063255714.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461642.1;locus_tag=VMS06_RS00290;product=Rz-like lysis system protein LysB;protein_id=WP_063255714.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 46195 46710 . - . ID=gene-VMS06_RS00295;Name=VMS06_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00295 NZ_JAVXZI010000001.1 Protein Homology CDS 46195 46710 . - 0 ID=cds-WP_014884901.1;Parent=gene-VMS06_RS00295;Dbxref=GenBank:WP_014884901.1;Name=WP_014884901.1;Ontology_term=GO:0009253,GO:0016998,GO:0042742,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA,defense response to bacterium|0042742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206870.1;locus_tag=VMS06_RS00295;product=lysozyme;protein_id=WP_014884901.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 46691 46906 . - . ID=gene-VMS06_RS00300;Name=VMS06_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00300 NZ_JAVXZI010000001.1 Protein Homology CDS 46691 46906 . - 0 ID=cds-WP_014884902.1;Parent=gene-VMS06_RS00300;Dbxref=GenBank:WP_014884902.1;Name=WP_014884902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001397650.1;locus_tag=VMS06_RS00300;product=hypothetical protein;protein_id=WP_014884902.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 46910 47113 . - . ID=gene-VMS06_RS00305;Name=VMS06_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00305 NZ_JAVXZI010000001.1 Protein Homology CDS 46910 47113 . - 0 ID=cds-WP_000868184.1;Parent=gene-VMS06_RS00305;Dbxref=GenBank:WP_000868184.1;Name=WP_000868184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461645.1;locus_tag=VMS06_RS00305;product=tail protein X;protein_id=WP_000868184.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 47113 47580 . - . ID=gene-VMS06_RS00310;Name=VMS06_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00310 NZ_JAVXZI010000001.1 Protein Homology CDS 47113 47580 . - 0 ID=cds-WP_063255715.1;Parent=gene-VMS06_RS00310;Dbxref=GenBank:WP_063255715.1;Name=WP_063255715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817419.1;locus_tag=VMS06_RS00310;product=head completion/stabilization protein;protein_id=WP_063255715.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 47679 48332 . - . ID=gene-VMS06_RS00315;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=VMS06_RS00315 NZ_JAVXZI010000001.1 Protein Homology CDS 47679 48332 . - 0 ID=cds-WP_032665783.1;Parent=gene-VMS06_RS00315;Dbxref=GenBank:WP_032665783.1;Name=WP_032665783.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441509.1;locus_tag=VMS06_RS00315;product=phage terminase small subunit;protein_id=WP_032665783.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 48336 49484 . - . ID=gene-VMS06_RS00320;Name=VMS06_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00320 NZ_JAVXZI010000001.1 Protein Homology CDS 48336 49484 . - 0 ID=cds-WP_032678728.1;Parent=gene-VMS06_RS00320;Dbxref=GenBank:WP_032678728.1;Name=WP_032678728.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382376.1;locus_tag=VMS06_RS00320;product=phage major capsid protein%2C P2 family;protein_id=WP_032678728.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 49500 50327 . - . ID=gene-VMS06_RS00325;Name=VMS06_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00325 NZ_JAVXZI010000001.1 Protein Homology CDS 49500 50327 . - 0 ID=cds-WP_032665781.1;Parent=gene-VMS06_RS00325;Dbxref=GenBank:WP_032665781.1;Name=WP_032665781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817416.1;locus_tag=VMS06_RS00325;product=GPO family capsid scaffolding protein;protein_id=WP_032665781.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 50477 52240 . + . ID=gene-VMS06_RS00330;Name=VMS06_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00330 NZ_JAVXZI010000001.1 Protein Homology CDS 50477 52240 . + 0 ID=cds-WP_045334074.1;Parent=gene-VMS06_RS00330;Dbxref=GenBank:WP_045334074.1;Name=WP_045334074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185719.1;locus_tag=VMS06_RS00330;product=terminase ATPase subunit family protein;protein_id=WP_045334074.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 52240 53289 . + . ID=gene-VMS06_RS00335;Name=VMS06_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00335 NZ_JAVXZI010000001.1 Protein Homology CDS 52240 53289 . + 0 ID=cds-WP_032610563.1;Parent=gene-VMS06_RS00335;Dbxref=GenBank:WP_032610563.1;Name=WP_032610563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015386364.1;locus_tag=VMS06_RS00335;product=phage portal protein;protein_id=WP_032610563.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 53884 54630 . - . ID=gene-VMS06_RS00340;Name=VMS06_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00340 NZ_JAVXZI010000001.1 Protein Homology CDS 53884 54630 . - 0 ID=cds-WP_063255716.1;Parent=gene-VMS06_RS00340;Dbxref=GenBank:WP_063255716.1;Name=WP_063255716.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010300256.1;locus_tag=VMS06_RS00340;product=HNH endonuclease family protein;protein_id=WP_063255716.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 54632 55813 . - . ID=gene-VMS06_RS00345;Name=VMS06_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00345 NZ_JAVXZI010000001.1 Protein Homology CDS 54632 55813 . - 0 ID=cds-WP_063255717.1;Parent=gene-VMS06_RS00345;Dbxref=GenBank:WP_063255717.1;Name=WP_063255717.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024700.7;locus_tag=VMS06_RS00345;product=AAA family ATPase;protein_id=WP_063255717.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq pseudogene 56090 56289 . - . ID=gene-VMS06_RS00350;Name=VMS06_RS00350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS00350;pseudo=true NZ_JAVXZI010000001.1 Protein Homology CDS 56090 56289 . - 0 ID=cds-VMS06_RS00350;Parent=gene-VMS06_RS00350;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217565.1;locus_tag=VMS06_RS00350;product=DinI-like family protein;pseudo=true;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 56299 56487 . - . ID=gene-VMS06_RS00355;Name=VMS06_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00355 NZ_JAVXZI010000001.1 Protein Homology CDS 56299 56487 . - 0 ID=cds-WP_063255718.1;Parent=gene-VMS06_RS00355;Dbxref=GenBank:WP_063255718.1;Name=WP_063255718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406337.1;locus_tag=VMS06_RS00355;product=hypothetical protein;protein_id=WP_063255718.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 56644 59037 . - . ID=gene-VMS06_RS00360;Name=VMS06_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00360 NZ_JAVXZI010000001.1 Protein Homology CDS 56644 59037 . - 0 ID=cds-WP_063255719.1;Parent=gene-VMS06_RS00360;Dbxref=GenBank:WP_063255719.1;Name=WP_063255719.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704955.1;locus_tag=VMS06_RS00360;product=replication endonuclease;protein_id=WP_063255719.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 59034 59885 . - . ID=gene-VMS06_RS00365;Name=VMS06_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00365 NZ_JAVXZI010000001.1 Protein Homology CDS 59034 59885 . - 0 ID=cds-WP_063255720.1;Parent=gene-VMS06_RS00365;Dbxref=GenBank:WP_063255720.1;Name=WP_063255720.1;Ontology_term=GO:0032259,GO:0032775,GO:0008757,GO:0009007,GO:0043565,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,sequence-specific DNA binding|0043565||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA,obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151013.1;locus_tag=VMS06_RS00365;product=DNA adenine methylase;protein_id=WP_063255720.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 59882 60109 . - . ID=gene-VMS06_RS00370;Name=VMS06_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00370 NZ_JAVXZI010000001.1 Protein Homology CDS 59882 60109 . - 0 ID=cds-WP_063255721.1;Parent=gene-VMS06_RS00370;Dbxref=GenBank:WP_063255721.1;Name=WP_063255721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001744222.1;locus_tag=VMS06_RS00370;product=TraR/DksA family transcriptional regulator;protein_id=WP_063255721.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 60109 60315 . - . ID=gene-VMS06_RS00375;Name=VMS06_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00375 NZ_JAVXZI010000001.1 Protein Homology CDS 60109 60315 . - 0 ID=cds-WP_162268862.1;Parent=gene-VMS06_RS00375;Dbxref=GenBank:WP_162268862.1;Name=WP_162268862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001178763.1;locus_tag=VMS06_RS00375;product=DUF2732 family protein;protein_id=WP_162268862.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 60404 60745 . - . ID=gene-VMS06_RS00380;Name=VMS06_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00380 NZ_JAVXZI010000001.1 Protein Homology CDS 60404 60745 . - 0 ID=cds-WP_063255722.1;Parent=gene-VMS06_RS00380;Dbxref=GenBank:WP_063255722.1;Name=WP_063255722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461660.1;locus_tag=VMS06_RS00380;product=DUF5347 family protein;protein_id=WP_063255722.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 60709 60909 . - . ID=gene-VMS06_RS00385;Name=VMS06_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00385 NZ_JAVXZI010000001.1 Protein Homology CDS 60709 60909 . - 0 ID=cds-WP_063860762.1;Parent=gene-VMS06_RS00385;Dbxref=GenBank:WP_063860762.1;Name=WP_063860762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000956185.1;locus_tag=VMS06_RS00385;product=phage filamentation protein Fil family protein;protein_id=WP_063860762.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 60917 61426 . - . ID=gene-VMS06_RS00390;Name=VMS06_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00390 NZ_JAVXZI010000001.1 Protein Homology CDS 60917 61426 . - 0 ID=cds-WP_063255723.1;Parent=gene-VMS06_RS00390;Dbxref=GenBank:WP_063255723.1;Name=WP_063255723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461663.1;locus_tag=VMS06_RS00390;product=phage regulatory CII family protein;protein_id=WP_063255723.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 61459 61701 . - . ID=gene-VMS06_RS00395;Name=VMS06_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00395 NZ_JAVXZI010000001.1 Protein Homology CDS 61459 61701 . - 0 ID=cds-WP_032636666.1;Parent=gene-VMS06_RS00395;Dbxref=GenBank:WP_032636666.1;Name=WP_032636666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817401.1;locus_tag=VMS06_RS00395;product=Rha family transcriptional regulator;protein_id=WP_032636666.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 61818 62450 . + . ID=gene-VMS06_RS00400;Name=VMS06_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00400 NZ_JAVXZI010000001.1 Protein Homology CDS 61818 62450 . + 0 ID=cds-WP_023972316.1;Parent=gene-VMS06_RS00400;Dbxref=GenBank:WP_023972316.1;Name=WP_023972316.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461665.1;locus_tag=VMS06_RS00400;product=phage repressor protein CI;protein_id=WP_023972316.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 62453 63481 . + . ID=gene-VMS06_RS00405;Name=VMS06_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00405 NZ_JAVXZI010000001.1 Protein Homology CDS 62453 63481 . + 0 ID=cds-WP_046888467.1;Parent=gene-VMS06_RS00405;Dbxref=GenBank:WP_046888467.1;Name=WP_046888467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817399.1;locus_tag=VMS06_RS00405;product=site-specific integrase;protein_id=WP_046888467.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 63487 64680 . + . ID=gene-VMS06_RS00410;Name=VMS06_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00410 NZ_JAVXZI010000001.1 Protein Homology CDS 63487 64680 . + 0 ID=cds-WP_023972318.1;Parent=gene-VMS06_RS00410;Dbxref=GenBank:WP_023972318.1;Name=WP_023972318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447126.1;locus_tag=VMS06_RS00410;product=hypothetical protein;protein_id=WP_023972318.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 65121 65414 . + . ID=gene-VMS06_RS00415;Name=VMS06_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00415 NZ_JAVXZI010000001.1 Protein Homology CDS 65121 65414 . + 0 ID=cds-WP_023298414.1;Parent=gene-VMS06_RS00415;Dbxref=GenBank:WP_023298414.1;Name=WP_023298414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830122.1;locus_tag=VMS06_RS00415;product=contact-dependent growth inhibition system immunity protein;protein_id=WP_023298414.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 65757 67073 . - . ID=gene-VMS06_RS00420;Name=VMS06_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00420 NZ_JAVXZI010000001.1 Protein Homology CDS 65757 67073 . - 0 ID=cds-WP_045623179.1;Parent=gene-VMS06_RS00420;Dbxref=GenBank:WP_045623179.1;Name=WP_045623179.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811661.1;locus_tag=VMS06_RS00420;product=amidase;protein_id=WP_045623179.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 67128 68423 . - . ID=gene-VMS06_RS00425;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=VMS06_RS00425 NZ_JAVXZI010000001.1 Protein Homology CDS 67128 68423 . - 0 ID=cds-WP_063147483.1;Parent=gene-VMS06_RS00425;Dbxref=GenBank:WP_063147483.1;Name=WP_063147483.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692810.1;locus_tag=VMS06_RS00425;product=histidinol dehydrogenase;protein_id=WP_063147483.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 68424 69566 . - . ID=gene-VMS06_RS00430;Name=VMS06_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00430 NZ_JAVXZI010000001.1 Protein Homology CDS 68424 69566 . - 0 ID=cds-WP_015571629.1;Parent=gene-VMS06_RS00430;Dbxref=GenBank:WP_015571629.1;Name=WP_015571629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178071.1;locus_tag=VMS06_RS00430;product=nuclear transport factor 2 family protein;protein_id=WP_015571629.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 69673 70644 . - . ID=gene-VMS06_RS00435;Name=VMS06_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00435 NZ_JAVXZI010000001.1 Protein Homology CDS 69673 70644 . - 0 ID=cds-WP_063147482.1;Parent=gene-VMS06_RS00435;Dbxref=GenBank:WP_063147482.1;Name=WP_063147482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571630.1;locus_tag=VMS06_RS00435;product=nuclear transport factor 2 family protein;protein_id=WP_063147482.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 70641 71711 . - . ID=gene-VMS06_RS00440;Name=VMS06_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00440 NZ_JAVXZI010000001.1 Protein Homology CDS 70641 71711 . - 0 ID=cds-WP_023298419.1;Parent=gene-VMS06_RS00440;Dbxref=GenBank:WP_023298419.1;Name=WP_023298419.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692809.1;locus_tag=VMS06_RS00440;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_023298419.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 72020 73258 . + . ID=gene-VMS06_RS00445;Name=VMS06_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00445 NZ_JAVXZI010000001.1 Protein Homology CDS 72020 73258 . + 0 ID=cds-WP_022649095.1;Parent=gene-VMS06_RS00445;Dbxref=GenBank:WP_022649095.1;Name=WP_022649095.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862274.1;locus_tag=VMS06_RS00445;product=MFS transporter;protein_id=WP_022649095.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 73334 74656 . + . ID=gene-VMS06_RS00450;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=VMS06_RS00450 NZ_JAVXZI010000001.1 Protein Homology CDS 73334 74656 . + 0 ID=cds-WP_063147481.1;Parent=gene-VMS06_RS00450;Dbxref=GenBank:WP_063147481.1;Name=WP_063147481.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178077.1;locus_tag=VMS06_RS00450;product=histidinol dehydrogenase;protein_id=WP_063147481.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 74660 75424 . + . ID=gene-VMS06_RS00455;Name=VMS06_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00455 NZ_JAVXZI010000001.1 Protein Homology CDS 74660 75424 . + 0 ID=cds-WP_032625875.1;Parent=gene-VMS06_RS00455;Dbxref=GenBank:WP_032625875.1;Name=WP_032625875.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811668.1;locus_tag=VMS06_RS00455;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_032625875.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 75433 76176 . + . ID=gene-VMS06_RS00460;Name=VMS06_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00460 NZ_JAVXZI010000001.1 Protein Homology CDS 75433 76176 . + 0 ID=cds-WP_023298422.1;Parent=gene-VMS06_RS00460;Dbxref=GenBank:WP_023298422.1;Name=WP_023298422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692805.1;locus_tag=VMS06_RS00460;product=alpha/beta fold hydrolase;protein_id=WP_023298422.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 76158 76949 . + . ID=gene-VMS06_RS00465;Name=VMS06_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00465 NZ_JAVXZI010000001.1 Protein Homology CDS 76158 76949 . + 0 ID=cds-WP_063147480.1;Parent=gene-VMS06_RS00465;Dbxref=GenBank:WP_063147480.1;Name=WP_063147480.1;Ontology_term=GO:0016830,GO:0046872;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692804.1;locus_tag=VMS06_RS00465;product=HpcH/HpaI aldolase family protein;protein_id=WP_063147480.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 76961 78139 . + . ID=gene-VMS06_RS00470;Name=VMS06_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00470 NZ_JAVXZI010000001.1 Protein Homology CDS 76961 78139 . + 0 ID=cds-WP_032625878.1;Parent=gene-VMS06_RS00470;Dbxref=GenBank:WP_032625878.1;Name=WP_032625878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862264.1;locus_tag=VMS06_RS00470;product=cupin domain-containing protein;protein_id=WP_032625878.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 78154 79083 . - . ID=gene-VMS06_RS00475;Name=VMS06_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00475 NZ_JAVXZI010000001.1 Protein Homology CDS 78154 79083 . - 0 ID=cds-WP_063147479.1;Parent=gene-VMS06_RS00475;Dbxref=GenBank:WP_063147479.1;Name=WP_063147479.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004961003.1;locus_tag=VMS06_RS00475;product=LysR family transcriptional regulator;protein_id=WP_063147479.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 79192 79797 . + . ID=gene-VMS06_RS00480;Name=VMS06_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00480 NZ_JAVXZI010000001.1 Protein Homology CDS 79192 79797 . + 0 ID=cds-WP_063147478.1;Parent=gene-VMS06_RS00480;Dbxref=GenBank:WP_063147478.1;Name=WP_063147478.1;Ontology_term=GO:0016491,GO:0016651,GO:0052851,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,ferric-chelate reductase (NADPH) activity|0052851||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882401.1;locus_tag=VMS06_RS00480;product=NADPH-dependent F420 reductase;protein_id=WP_063147478.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 79816 80697 . + . ID=gene-VMS06_RS00485;Name=VMS06_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00485 NZ_JAVXZI010000001.1 Protein Homology CDS 79816 80697 . + 0 ID=cds-WP_063147477.1;Parent=gene-VMS06_RS00485;Dbxref=GenBank:WP_063147477.1;Name=WP_063147477.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882400.1;locus_tag=VMS06_RS00485;product=helix-turn-helix domain-containing protein;protein_id=WP_063147477.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 80799 81545 . + . ID=gene-VMS06_RS00490;Name=VMS06_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00490 NZ_JAVXZI010000001.1 Protein Homology CDS 80799 81545 . + 0 ID=cds-WP_022649104.1;Parent=gene-VMS06_RS00490;Dbxref=GenBank:WP_022649104.1;Name=WP_022649104.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882399.1;locus_tag=VMS06_RS00490;product=SDR family oxidoreductase;protein_id=WP_022649104.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 81585 82307 . - . ID=gene-VMS06_RS00495;Name=VMS06_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00495 NZ_JAVXZI010000001.1 Protein Homology CDS 81585 82307 . - 0 ID=cds-WP_063147476.1;Parent=gene-VMS06_RS00495;Dbxref=GenBank:WP_063147476.1;Name=WP_063147476.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308333.1;locus_tag=VMS06_RS00495;product=SDR family oxidoreductase;protein_id=WP_063147476.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 82406 83323 . + . ID=gene-VMS06_RS00500;Name=VMS06_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00500 NZ_JAVXZI010000001.1 Protein Homology CDS 82406 83323 . + 0 ID=cds-WP_048965951.1;Parent=gene-VMS06_RS00500;Dbxref=GenBank:WP_048965951.1;Name=WP_048965951.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862232.1;locus_tag=VMS06_RS00500;product=LysR family transcriptional regulator;protein_id=WP_048965951.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 84218 95641 . + . ID=gene-VMS06_RS00505;Name=VMS06_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00505 NZ_JAVXZI010000001.1 Protein Homology CDS 84218 95641 . + 0 ID=cds-WP_063843670.1;Parent=gene-VMS06_RS00505;Dbxref=GenBank:WP_063843670.1;Name=WP_063843670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862230.1;locus_tag=VMS06_RS00505;product=BapA/Bap/LapF family large adhesin;protein_id=WP_063843670.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 95724 97127 . + . ID=gene-VMS06_RS00510;Name=VMS06_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00510 NZ_JAVXZI010000001.1 Protein Homology CDS 95724 97127 . + 0 ID=cds-WP_022649108.1;Parent=gene-VMS06_RS00510;Dbxref=GenBank:WP_022649108.1;Name=WP_022649108.1;Ontology_term=GO:0055085,GO:0015562,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832975.1;locus_tag=VMS06_RS00510;product=TolC family outer membrane protein;protein_id=WP_022649108.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq pseudogene 97124 99316 . + . ID=gene-VMS06_RS00515;Name=VMS06_RS00515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS00515;pseudo=true NZ_JAVXZI010000001.1 Protein Homology CDS 97124 99316 . + 0 ID=cds-VMS06_RS00515;Parent=gene-VMS06_RS00515;Note=internal stop;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382756.1;locus_tag=VMS06_RS00515;product=type I secretion system permease/ATPase;pseudo=true;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 99297 100496 . + . ID=gene-VMS06_RS00520;Name=VMS06_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00520 NZ_JAVXZI010000001.1 Protein Homology CDS 99297 100496 . + 0 ID=cds-WP_022649110.1;Parent=gene-VMS06_RS00520;Dbxref=GenBank:WP_022649110.1;Name=WP_022649110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130444.1;locus_tag=VMS06_RS00520;product=beta-barrel domain-containing protein;protein_id=WP_022649110.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 100630 101055 . + . ID=gene-VMS06_RS00525;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=VMS06_RS00525 NZ_JAVXZI010000001.1 Protein Homology CDS 100630 101055 . + 0 ID=cds-WP_022649111.1;Parent=gene-VMS06_RS00525;Dbxref=GenBank:WP_022649111.1;Name=WP_022649111.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883888.1;locus_tag=VMS06_RS00525;product=nucleoside triphosphatase NudI;protein_id=WP_022649111.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 101027 101758 . - . ID=gene-VMS06_RS00530;Name=VMS06_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00530 NZ_JAVXZI010000001.1 Protein Homology CDS 101027 101758 . - 0 ID=cds-WP_063147475.1;Parent=gene-VMS06_RS00530;Dbxref=GenBank:WP_063147475.1;Name=WP_063147475.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832983.1;locus_tag=VMS06_RS00530;product=helix-turn-helix domain-containing protein;protein_id=WP_063147475.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 101854 102273 . + . ID=gene-VMS06_RS00535;Name=VMS06_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00535 NZ_JAVXZI010000001.1 Protein Homology CDS 101854 102273 . + 0 ID=cds-WP_022649113.1;Parent=gene-VMS06_RS00535;Dbxref=GenBank:WP_022649113.1;Name=WP_022649113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098393.1;locus_tag=VMS06_RS00535;product=nuclear transport factor 2 family protein;protein_id=WP_022649113.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 102328 103509 . - . ID=gene-VMS06_RS00540;Name=VMS06_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00540 NZ_JAVXZI010000001.1 Protein Homology CDS 102328 103509 . - 0 ID=cds-WP_022649114.1;Parent=gene-VMS06_RS00540;Dbxref=GenBank:WP_022649114.1;Name=WP_022649114.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382758.1;locus_tag=VMS06_RS00540;product=aminotransferase-like domain-containing protein;protein_id=WP_022649114.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 103530 104417 . - . ID=gene-VMS06_RS00545;Name=VMS06_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00545 NZ_JAVXZI010000001.1 Protein Homology CDS 103530 104417 . - 0 ID=cds-WP_022649115.1;Parent=gene-VMS06_RS00545;Dbxref=GenBank:WP_022649115.1;Name=WP_022649115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571641.1;locus_tag=VMS06_RS00545;product=LysR substrate-binding domain-containing protein;protein_id=WP_022649115.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 104515 105117 . + . ID=gene-VMS06_RS00550;Name=VMS06_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00550 NZ_JAVXZI010000001.1 Protein Homology CDS 104515 105117 . + 0 ID=cds-WP_063147474.1;Parent=gene-VMS06_RS00550;Dbxref=GenBank:WP_063147474.1;Name=WP_063147474.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228839.1;locus_tag=VMS06_RS00550;product=short chain dehydrogenase;protein_id=WP_063147474.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 105114 105845 . - . ID=gene-VMS06_RS00555;Name=VMS06_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00555 NZ_JAVXZI010000001.1 Protein Homology CDS 105114 105845 . - 0 ID=cds-WP_063147487.1;Parent=gene-VMS06_RS00555;Dbxref=GenBank:WP_063147487.1;Name=WP_063147487.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382760.1;locus_tag=VMS06_RS00555;product=class I SAM-dependent methyltransferase;protein_id=WP_063147487.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 105971 107350 . - . ID=gene-VMS06_RS00560;Name=VMS06_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00560 NZ_JAVXZI010000001.1 Protein Homology CDS 105971 107350 . - 0 ID=cds-WP_063147473.1;Parent=gene-VMS06_RS00560;Dbxref=GenBank:WP_063147473.1;Name=WP_063147473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382761.1;locus_tag=VMS06_RS00560;product=amidohydrolase family protein;protein_id=WP_063147473.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 107352 108308 . - . ID=gene-VMS06_RS00565;Name=VMS06_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00565 NZ_JAVXZI010000001.1 Protein Homology CDS 107352 108308 . - 0 ID=cds-WP_058646221.1;Parent=gene-VMS06_RS00565;Dbxref=GenBank:WP_058646221.1;Name=WP_058646221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178126.1;locus_tag=VMS06_RS00565;product=carbamate kinase family protein;protein_id=WP_058646221.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 108305 109885 . - . ID=gene-VMS06_RS00570;Name=VMS06_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00570 NZ_JAVXZI010000001.1 Protein Homology CDS 108305 109885 . - 0 ID=cds-WP_022649120.1;Parent=gene-VMS06_RS00570;Dbxref=GenBank:WP_022649120.1;Name=WP_022649120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098405.1;locus_tag=VMS06_RS00570;product=hypothetical protein;protein_id=WP_022649120.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 109897 111312 . - . ID=gene-VMS06_RS00575;Name=VMS06_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00575 NZ_JAVXZI010000001.1 Protein Homology CDS 109897 111312 . - 0 ID=cds-WP_048965960.1;Parent=gene-VMS06_RS00575;Dbxref=GenBank:WP_048965960.1;Name=WP_048965960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883874.1;locus_tag=VMS06_RS00575;product=YlbE family protein;protein_id=WP_048965960.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 111312 112853 . - . ID=gene-VMS06_RS00580;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=VMS06_RS00580 NZ_JAVXZI010000001.1 Protein Homology CDS 111312 112853 . - 0 ID=cds-WP_063147472.1;Parent=gene-VMS06_RS00580;Dbxref=GenBank:WP_063147472.1;Name=WP_063147472.1;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308396.1;locus_tag=VMS06_RS00580;product=acyl-CoA synthetase FdrA;protein_id=WP_063147472.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 112962 113567 . - . ID=gene-VMS06_RS00585;Name=VMS06_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00585 NZ_JAVXZI010000001.1 Protein Homology CDS 112962 113567 . - 0 ID=cds-WP_022649123.1;Parent=gene-VMS06_RS00585;Dbxref=GenBank:WP_022649123.1;Name=WP_022649123.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382766.1;locus_tag=VMS06_RS00585;product=ankyrin repeat domain-containing protein;protein_id=WP_022649123.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 113888 114817 . + . ID=gene-VMS06_RS00590;Name=VMS06_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00590 NZ_JAVXZI010000001.1 Protein Homology CDS 113888 114817 . + 0 ID=cds-WP_022649124.1;Parent=gene-VMS06_RS00590;Dbxref=GenBank:WP_022649124.1;Name=WP_022649124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098409.1;locus_tag=VMS06_RS00590;product=LysR substrate-binding domain-containing protein;protein_id=WP_022649124.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 114814 114972 . - . ID=gene-VMS06_RS00595;Name=VMS06_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00595 NZ_JAVXZI010000001.1 Protein Homology CDS 114814 114972 . - 0 ID=cds-WP_003862203.1;Parent=gene-VMS06_RS00595;Dbxref=GenBank:WP_003862203.1;Name=WP_003862203.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862203.1;locus_tag=VMS06_RS00595;product=YqaE/Pmp3 family membrane protein;protein_id=WP_003862203.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 115152 115670 . + . ID=gene-VMS06_RS00600;Name=VMS06_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00600 NZ_JAVXZI010000001.1 Protein Homology CDS 115152 115670 . + 0 ID=cds-WP_323630605.1;Parent=gene-VMS06_RS00600;Dbxref=GenBank:WP_323630605.1;Name=WP_323630605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811689.1;locus_tag=VMS06_RS00600;product=rhodanese family protein;protein_id=WP_323630605.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 115753 115932 . + . ID=gene-VMS06_RS00605;Name=VMS06_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00605 NZ_JAVXZI010000001.1 Protein Homology CDS 115753 115932 . + 0 ID=cds-WP_006811690.1;Parent=gene-VMS06_RS00605;Dbxref=GenBank:WP_006811690.1;Name=WP_006811690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494935.1;locus_tag=VMS06_RS00605;product=YodC family protein;protein_id=WP_006811690.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 115970 116374 . - . ID=gene-VMS06_RS00610;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=VMS06_RS00610 NZ_JAVXZI010000001.1 Protein Homology CDS 115970 116374 . - 0 ID=cds-WP_022649126.1;Parent=gene-VMS06_RS00610;Dbxref=GenBank:WP_022649126.1;Name=WP_022649126.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001726338.1;locus_tag=VMS06_RS00610;product=DNA-binding protein StpA;protein_id=WP_022649126.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 116872 117321 . + . ID=gene-VMS06_RS00615;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=VMS06_RS00615 NZ_JAVXZI010000001.1 Protein Homology CDS 116872 117321 . + 0 ID=cds-WP_022649127.1;Parent=gene-VMS06_RS00615;Dbxref=GenBank:WP_022649127.1;Name=WP_022649127.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461726.1;locus_tag=VMS06_RS00615;product=L-alanine exporter AlaE;protein_id=WP_022649127.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 117354 117698 . - . ID=gene-VMS06_RS00620;Name=VMS06_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00620 NZ_JAVXZI010000001.1 Protein Homology CDS 117354 117698 . - 0 ID=cds-WP_006811693.1;Parent=gene-VMS06_RS00620;Dbxref=GenBank:WP_006811693.1;Name=WP_006811693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502568.1;locus_tag=VMS06_RS00620;product=DUF2002 family protein;protein_id=WP_006811693.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 117857 118183 . + . ID=gene-VMS06_RS00625;Name=VMS06_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00625 NZ_JAVXZI010000001.1 Protein Homology CDS 117857 118183 . + 0 ID=cds-WP_017382769.1;Parent=gene-VMS06_RS00625;Dbxref=GenBank:WP_017382769.1;Name=WP_017382769.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862189.1;locus_tag=VMS06_RS00625;product=ElaB/YgaM/YqjD family protein;protein_id=WP_017382769.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 118427 118666 . + . ID=gene-VMS06_RS00630;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=VMS06_RS00630 NZ_JAVXZI010000001.1 Protein Homology CDS 118427 118666 . + 0 ID=cds-WP_017382770.1;Parent=gene-VMS06_RS00630;Dbxref=GenBank:WP_017382770.1;Name=WP_017382770.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883865.1;locus_tag=VMS06_RS00630;product=glutaredoxin-like protein NrdH;protein_id=WP_017382770.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 118663 119073 . + . ID=gene-VMS06_RS00635;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=VMS06_RS00635 NZ_JAVXZI010000001.1 Protein Homology CDS 118663 119073 . + 0 ID=cds-WP_022649128.1;Parent=gene-VMS06_RS00635;Dbxref=GenBank:WP_022649128.1;Name=WP_022649128.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370580.1;locus_tag=VMS06_RS00635;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_022649128.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 119046 121190 . + . ID=gene-VMS06_RS00640;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=VMS06_RS00640 NZ_JAVXZI010000001.1 Protein Homology CDS 119046 121190 . + 0 ID=cds-WP_045308451.1;Parent=gene-VMS06_RS00640;Dbxref=GenBank:WP_045308451.1;Name=WP_045308451.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311565.1;locus_tag=VMS06_RS00640;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_045308451.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 121200 122159 . + . ID=gene-VMS06_RS00645;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=VMS06_RS00645 NZ_JAVXZI010000001.1 Protein Homology CDS 121200 122159 . + 0 ID=cds-WP_063147469.1;Parent=gene-VMS06_RS00645;Dbxref=GenBank:WP_063147469.1;Name=WP_063147469.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461734.1;locus_tag=VMS06_RS00645;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_063147469.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 122493 123695 . + . ID=gene-VMS06_RS00650;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=VMS06_RS00650 NZ_JAVXZI010000001.1 Protein Homology CDS 122493 123695 . + 0 ID=cds-WP_022649131.1;Parent=gene-VMS06_RS00650;Dbxref=GenBank:WP_022649131.1;Name=WP_022649131.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461735.1;locus_tag=VMS06_RS00650;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_022649131.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 123688 124752 . + . ID=gene-VMS06_RS00655;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=VMS06_RS00655 NZ_JAVXZI010000001.1 Protein Homology CDS 123688 124752 . + 0 ID=cds-WP_022649132.1;Parent=gene-VMS06_RS00655;Dbxref=GenBank:WP_022649132.1;Name=WP_022649132.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417164.1;locus_tag=VMS06_RS00655;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_022649132.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 124762 125757 . + . ID=gene-VMS06_RS00660;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=VMS06_RS00660 NZ_JAVXZI010000001.1 Protein Homology CDS 124762 125757 . + 0 ID=cds-WP_017382774.1;Parent=gene-VMS06_RS00660;Dbxref=GenBank:WP_017382774.1;Name=WP_017382774.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461737.1;locus_tag=VMS06_RS00660;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_017382774.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 125967 127151 . + . ID=gene-VMS06_RS00665;Name=VMS06_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00665 NZ_JAVXZI010000001.1 Protein Homology CDS 125967 127151 . + 0 ID=cds-WP_023306803.1;Parent=gene-VMS06_RS00665;Dbxref=GenBank:WP_023306803.1;Name=WP_023306803.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382775.1;locus_tag=VMS06_RS00665;product=MFS transporter;protein_id=WP_023306803.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 127466 127996 . + . ID=gene-VMS06_RS00670;Name=emrR;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;locus_tag=VMS06_RS00670 NZ_JAVXZI010000001.1 Protein Homology CDS 127466 127996 . + 0 ID=cds-WP_017694792.1;Parent=gene-VMS06_RS00670;Dbxref=GenBank:WP_017694792.1;Name=WP_017694792.1;gbkey=CDS;gene=emrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461739.1;locus_tag=VMS06_RS00670;product=multidrug efflux transporter EmrAB transcriptional repressor EmrR;protein_id=WP_017694792.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 128125 129297 . + . ID=gene-VMS06_RS00675;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=VMS06_RS00675 NZ_JAVXZI010000001.1 Protein Homology CDS 128125 129297 . + 0 ID=cds-WP_022649133.1;Parent=gene-VMS06_RS00675;Dbxref=GenBank:WP_022649133.1;Name=WP_022649133.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461740.1;locus_tag=VMS06_RS00675;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_022649133.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 129314 130861 . + . ID=gene-VMS06_RS00680;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=VMS06_RS00680 NZ_JAVXZI010000001.1 Protein Homology CDS 129314 130861 . + 0 ID=cds-WP_022649134.1;Parent=gene-VMS06_RS00680;Dbxref=GenBank:WP_022649134.1;Name=WP_022649134.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=emrB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884969.1;locus_tag=VMS06_RS00680;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_022649134.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq pseudogene 131091 131234 . + . ID=gene-VMS06_RS00685;Name=VMS06_RS00685;end_range=131234,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS00685;partial=true;pseudo=true;start_range=.,131091 NZ_JAVXZI010000001.1 Protein Homology CDS 131091 131234 . + 0 ID=cds-VMS06_RS00685;Parent=gene-VMS06_RS00685;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=131234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228391.1;locus_tag=VMS06_RS00685;partial=true;product=hypothetical protein;pseudo=true;start_range=.,131091;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 131296 131811 . - . ID=gene-VMS06_RS00690;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=VMS06_RS00690 NZ_JAVXZI010000001.1 Protein Homology CDS 131296 131811 . - 0 ID=cds-WP_003862180.1;Parent=gene-VMS06_RS00690;Dbxref=GenBank:WP_003862180.1;Name=WP_003862180.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=VMS06_RS00690;product=S-ribosylhomocysteine lyase;protein_id=WP_003862180.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 131964 133508 . - . ID=gene-VMS06_RS00695;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=VMS06_RS00695 NZ_JAVXZI010000001.1 Protein Homology CDS 131964 133508 . - 0 ID=cds-WP_063147468.1;Parent=gene-VMS06_RS00695;Dbxref=GenBank:WP_063147468.1;Name=WP_063147468.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461744.1;locus_tag=VMS06_RS00695;product=glutamate--cysteine ligase;protein_id=WP_063147468.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 133592 134020 . - . ID=gene-VMS06_RS00700;Name=VMS06_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00700 NZ_JAVXZI010000001.1 Protein Homology CDS 133592 134020 . - 0 ID=cds-WP_017692791.1;Parent=gene-VMS06_RS00700;Dbxref=GenBank:WP_017692791.1;Name=WP_017692791.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417174.1;locus_tag=VMS06_RS00700;product=YqaA family protein;protein_id=WP_017692791.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 134017 134583 . - . ID=gene-VMS06_RS00705;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=VMS06_RS00705 NZ_JAVXZI010000001.1 Protein Homology CDS 134017 134583 . - 0 ID=cds-WP_022649138.1;Parent=gene-VMS06_RS00705;Dbxref=GenBank:WP_022649138.1;Name=WP_022649138.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228396.1;locus_tag=VMS06_RS00705;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_022649138.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 134710 134786 . - . ID=gene-VMS06_RS00710;Name=VMS06_RS00710;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS00710 NZ_JAVXZI010000001.1 tRNAscan-SE tRNA 134710 134786 . - . ID=rna-VMS06_RS00710;Parent=gene-VMS06_RS00710;anticodon=(pos:complement(134750..134752));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS00710;product=tRNA-Arg NZ_JAVXZI010000001.1 tRNAscan-SE exon 134710 134786 . - . ID=exon-VMS06_RS00710-1;Parent=rna-VMS06_RS00710;anticodon=(pos:complement(134750..134752));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS00710;product=tRNA-Arg NZ_JAVXZI010000001.1 RefSeq gene 134851 134927 . - . ID=gene-VMS06_RS00715;Name=VMS06_RS00715;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS00715 NZ_JAVXZI010000001.1 tRNAscan-SE tRNA 134851 134927 . - . ID=rna-VMS06_RS00715;Parent=gene-VMS06_RS00715;anticodon=(pos:complement(134891..134893));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS00715;product=tRNA-Arg NZ_JAVXZI010000001.1 tRNAscan-SE exon 134851 134927 . - . ID=exon-VMS06_RS00715-1;Parent=rna-VMS06_RS00715;anticodon=(pos:complement(134891..134893));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS00715;product=tRNA-Arg NZ_JAVXZI010000001.1 RefSeq gene 134992 135068 . - . ID=gene-VMS06_RS00720;Name=VMS06_RS00720;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS00720 NZ_JAVXZI010000001.1 tRNAscan-SE tRNA 134992 135068 . - . ID=rna-VMS06_RS00720;Parent=gene-VMS06_RS00720;anticodon=(pos:complement(135032..135034));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS00720;product=tRNA-Arg NZ_JAVXZI010000001.1 tRNAscan-SE exon 134992 135068 . - . ID=exon-VMS06_RS00720-1;Parent=rna-VMS06_RS00720;anticodon=(pos:complement(135032..135034));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS00720;product=tRNA-Arg NZ_JAVXZI010000001.1 RefSeq gene 135133 135209 . - . ID=gene-VMS06_RS00725;Name=VMS06_RS00725;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS00725 NZ_JAVXZI010000001.1 tRNAscan-SE tRNA 135133 135209 . - . ID=rna-VMS06_RS00725;Parent=gene-VMS06_RS00725;anticodon=(pos:complement(135173..135175));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS00725;product=tRNA-Arg NZ_JAVXZI010000001.1 tRNAscan-SE exon 135133 135209 . - . ID=exon-VMS06_RS00725-1;Parent=rna-VMS06_RS00725;anticodon=(pos:complement(135173..135175));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS00725;product=tRNA-Arg NZ_JAVXZI010000001.1 RefSeq gene 135214 135306 . - . ID=gene-VMS06_RS00730;Name=VMS06_RS00730;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS00730 NZ_JAVXZI010000001.1 tRNAscan-SE tRNA 135214 135306 . - . ID=rna-VMS06_RS00730;Parent=gene-VMS06_RS00730;anticodon=(pos:complement(135270..135272));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS00730;product=tRNA-Ser NZ_JAVXZI010000001.1 tRNAscan-SE exon 135214 135306 . - . ID=exon-VMS06_RS00730-1;Parent=rna-VMS06_RS00730;anticodon=(pos:complement(135270..135272));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS00730;product=tRNA-Ser NZ_JAVXZI010000001.1 RefSeq gene 135649 135834 . - . ID=gene-VMS06_RS00735;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=VMS06_RS00735 NZ_JAVXZI010000001.1 Protein Homology CDS 135649 135834 . - 0 ID=cds-WP_000906486.1;Parent=gene-VMS06_RS00735;Dbxref=GenBank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=VMS06_RS00735;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 136076 138703 . - . ID=gene-VMS06_RS00740;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=VMS06_RS00740 NZ_JAVXZI010000001.1 Protein Homology CDS 136076 138703 . - 0 ID=cds-WP_032676479.1;Parent=gene-VMS06_RS00740;Dbxref=GenBank:WP_032676479.1;Name=WP_032676479.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387899.1;locus_tag=VMS06_RS00740;product=alanine--tRNA ligase;protein_id=WP_032676479.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 138835 139335 . - . ID=gene-VMS06_RS00745;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=VMS06_RS00745 NZ_JAVXZI010000001.1 Protein Homology CDS 138835 139335 . - 0 ID=cds-WP_017382782.1;Parent=gene-VMS06_RS00745;Dbxref=GenBank:WP_017382782.1;Name=WP_017382782.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461749.1;locus_tag=VMS06_RS00745;product=recombination regulator RecX;protein_id=WP_017382782.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 139404 140462 . - . ID=gene-VMS06_RS00750;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=VMS06_RS00750 NZ_JAVXZI010000001.1 Protein Homology CDS 139404 140462 . - 0 ID=cds-WP_022649140.1;Parent=gene-VMS06_RS00750;Dbxref=GenBank:WP_022649140.1;Name=WP_022649140.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228402.1;locus_tag=VMS06_RS00750;product=recombinase RecA;protein_id=WP_022649140.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 140552 141049 . - . ID=gene-VMS06_RS00755;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=VMS06_RS00755 NZ_JAVXZI010000001.1 Protein Homology CDS 140552 141049 . - 0 ID=cds-WP_003862172.1;Parent=gene-VMS06_RS00755;Dbxref=GenBank:WP_003862172.1;Name=WP_003862172.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417180.1;locus_tag=VMS06_RS00755;product=nicotinamide-nucleotide amidase;protein_id=WP_003862172.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 141180 142058 . - . ID=gene-VMS06_RS00760;Name=VMS06_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00760 NZ_JAVXZI010000001.1 Protein Homology CDS 141180 142058 . - 0 ID=cds-WP_063147467.1;Parent=gene-VMS06_RS00760;Dbxref=GenBank:WP_063147467.1;Name=WP_063147467.1;Ontology_term=GO:0030001,GO:0005524,GO:0042626,GO:0046872,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185370.1;locus_tag=VMS06_RS00760;product=metal ABC transporter substrate-binding protein;protein_id=WP_063147467.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 142073 142933 . - . ID=gene-VMS06_RS00765;Name=VMS06_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00765 NZ_JAVXZI010000001.1 Protein Homology CDS 142073 142933 . - 0 ID=cds-WP_045621628.1;Parent=gene-VMS06_RS00765;Dbxref=GenBank:WP_045621628.1;Name=WP_045621628.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571669.1;locus_tag=VMS06_RS00765;product=metal ABC transporter permease;protein_id=WP_045621628.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 142930 143583 . - . ID=gene-VMS06_RS00770;Name=VMS06_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00770 NZ_JAVXZI010000001.1 Protein Homology CDS 142930 143583 . - 0 ID=cds-WP_063147466.1;Parent=gene-VMS06_RS00770;Dbxref=GenBank:WP_063147466.1;Name=WP_063147466.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382783.1;locus_tag=VMS06_RS00770;product=metal ABC transporter ATP-binding protein;protein_id=WP_063147466.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 143852 144952 . - . ID=gene-VMS06_RS00775;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=VMS06_RS00775 NZ_JAVXZI010000001.1 Protein Homology CDS 143852 144952 . - 0 ID=cds-WP_022649145.1;Parent=gene-VMS06_RS00775;Dbxref=GenBank:WP_022649145.1;Name=WP_022649145.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884984.1;locus_tag=VMS06_RS00775;product=lytic murein transglycosylase B;protein_id=WP_022649145.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 145204 145767 . + . ID=gene-VMS06_RS00780;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=VMS06_RS00780 NZ_JAVXZI010000001.1 Protein Homology CDS 145204 145767 . + 0 ID=cds-WP_003862164.1;Parent=gene-VMS06_RS00780;Dbxref=GenBank:WP_003862164.1;Name=WP_003862164.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461753.1;locus_tag=VMS06_RS00780;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_003862164.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 145764 146723 . + . ID=gene-VMS06_RS00785;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=VMS06_RS00785 NZ_JAVXZI010000001.1 Protein Homology CDS 145764 146723 . + 0 ID=cds-WP_063147465.1;Parent=gene-VMS06_RS00785;Dbxref=GenBank:WP_063147465.1;Name=WP_063147465.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461754.1;locus_tag=VMS06_RS00785;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_063147465.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 146736 147098 . + . ID=gene-VMS06_RS00790;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=VMS06_RS00790 NZ_JAVXZI010000001.1 Protein Homology CDS 146736 147098 . + 0 ID=cds-WP_063147464.1;Parent=gene-VMS06_RS00790;Dbxref=GenBank:WP_063147464.1;Name=WP_063147464.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461755.1;locus_tag=VMS06_RS00790;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_063147464.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 147113 147892 . + . ID=gene-VMS06_RS00795;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=VMS06_RS00795 NZ_JAVXZI010000001.1 Protein Homology CDS 147113 147892 . + 0 ID=cds-WP_023298456.1;Parent=gene-VMS06_RS00795;Dbxref=GenBank:WP_023298456.1;Name=WP_023298456.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461756.1;locus_tag=VMS06_RS00795;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_023298456.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 147984 148343 . + . ID=gene-VMS06_RS00800;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=VMS06_RS00800 NZ_JAVXZI010000001.1 Protein Homology CDS 147984 148343 . + 0 ID=cds-WP_063137603.1;Parent=gene-VMS06_RS00800;Dbxref=GenBank:WP_063137603.1;Name=WP_063137603.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461757.1;locus_tag=VMS06_RS00800;product=transcriptional regulator GutM;protein_id=WP_063137603.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 148407 149180 . + . ID=gene-VMS06_RS00805;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=VMS06_RS00805 NZ_JAVXZI010000001.1 Protein Homology CDS 148407 149180 . + 0 ID=cds-WP_015571676.1;Parent=gene-VMS06_RS00805;Dbxref=GenBank:WP_015571676.1;Name=WP_015571676.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417187.1;locus_tag=VMS06_RS00805;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_015571676.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 149173 150138 . + . ID=gene-VMS06_RS00810;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=VMS06_RS00810 NZ_JAVXZI010000001.1 Protein Homology CDS 149173 150138 . + 0 ID=cds-WP_023298458.1;Parent=gene-VMS06_RS00810;Dbxref=GenBank:WP_023298458.1;Name=WP_023298458.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311591.2;locus_tag=VMS06_RS00810;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_023298458.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 150135 151649 . - . ID=gene-VMS06_RS00815;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=VMS06_RS00815 NZ_JAVXZI010000001.1 Protein Homology CDS 150135 151649 . - 0 ID=cds-WP_023298459.1;Parent=gene-VMS06_RS00815;Dbxref=GenBank:WP_023298459.1;Name=WP_023298459.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689505.1;locus_tag=VMS06_RS00815;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_023298459.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 151837 153285 . + . ID=gene-VMS06_RS00820;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=VMS06_RS00820 NZ_JAVXZI010000001.1 Protein Homology CDS 151837 153285 . + 0 ID=cds-WP_022649152.1;Parent=gene-VMS06_RS00820;Dbxref=GenBank:WP_022649152.1;Name=WP_022649152.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461761.1;locus_tag=VMS06_RS00820;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_022649152.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 153282 154415 . + . ID=gene-VMS06_RS00825;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=VMS06_RS00825 NZ_JAVXZI010000001.1 Protein Homology CDS 153282 154415 . + 0 ID=cds-WP_063147463.1;Parent=gene-VMS06_RS00825;Dbxref=GenBank:WP_063147463.1;Name=WP_063147463.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499562.1;locus_tag=VMS06_RS00825;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_063147463.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 154529 155551 . - . ID=gene-VMS06_RS00830;Name=VMS06_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00830 NZ_JAVXZI010000001.1 Protein Homology CDS 154529 155551 . - 0 ID=cds-WP_063843668.1;Parent=gene-VMS06_RS00830;Dbxref=GenBank:WP_063843668.1;Name=WP_063843668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692781.1;locus_tag=VMS06_RS00830;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_063843668.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 155553 157769 . - . ID=gene-VMS06_RS00835;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=VMS06_RS00835 NZ_JAVXZI010000001.1 Protein Homology CDS 155553 157769 . - 0 ID=cds-WP_063147461.1;Parent=gene-VMS06_RS00835;Dbxref=GenBank:WP_063147461.1;Name=WP_063147461.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692780.1;locus_tag=VMS06_RS00835;product=carbamoyltransferase HypF;protein_id=WP_063147461.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 157776 158321 . - . ID=gene-VMS06_RS00840;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=VMS06_RS00840 NZ_JAVXZI010000001.1 Protein Homology CDS 157776 158321 . - 0 ID=cds-WP_017382793.1;Parent=gene-VMS06_RS00840;Dbxref=GenBank:WP_017382793.1;Name=WP_017382793.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461764.1;locus_tag=VMS06_RS00840;product=electron transport protein HydN;protein_id=WP_017382793.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 158455 159468 . - . ID=gene-VMS06_RS00845;Name=VMS06_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00845 NZ_JAVXZI010000001.1 Protein Homology CDS 158455 159468 . - 0 ID=cds-WP_063147460.1;Parent=gene-VMS06_RS00845;Dbxref=GenBank:WP_063147460.1;Name=WP_063147460.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862152.1;locus_tag=VMS06_RS00845;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_063147460.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 159683 161134 . + . ID=gene-VMS06_RS00850;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=VMS06_RS00850 NZ_JAVXZI010000001.1 Protein Homology CDS 159683 161134 . + 0 ID=cds-WP_022649157.1;Parent=gene-VMS06_RS00850;Dbxref=GenBank:WP_022649157.1;Name=WP_022649157.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434458.1;locus_tag=VMS06_RS00850;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_022649157.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 161153 162577 . + . ID=gene-VMS06_RS00855;Name=VMS06_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00855 NZ_JAVXZI010000001.1 Protein Homology CDS 161153 162577 . + 0 ID=cds-WP_023298466.1;Parent=gene-VMS06_RS00855;Dbxref=GenBank:WP_023298466.1;Name=WP_023298466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130576.1;locus_tag=VMS06_RS00855;product=6-phospho-beta-glucosidase;protein_id=WP_023298466.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 162637 163122 . - . ID=gene-VMS06_RS00860;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=VMS06_RS00860 NZ_JAVXZI010000001.1 Protein Homology CDS 162637 163122 . - 0 ID=cds-WP_022649159.1;Parent=gene-VMS06_RS00860;Dbxref=GenBank:WP_022649159.1;Name=WP_022649159.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134345.1;locus_tag=VMS06_RS00860;product=hydrogenase maturation peptidase HycI;protein_id=WP_022649159.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 163115 163525 . - . ID=gene-VMS06_RS00865;Name=VMS06_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00865 NZ_JAVXZI010000001.1 Protein Homology CDS 163115 163525 . - 0 ID=cds-WP_063147459.1;Parent=gene-VMS06_RS00865;Dbxref=GenBank:WP_063147459.1;Name=WP_063147459.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228428.1;locus_tag=VMS06_RS00865;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_063147459.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 163522 164289 . - . ID=gene-VMS06_RS00870;Name=VMS06_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00870 NZ_JAVXZI010000001.1 Protein Homology CDS 163522 164289 . - 0 ID=cds-WP_022649161.1;Parent=gene-VMS06_RS00870;Dbxref=GenBank:WP_022649161.1;Name=WP_022649161.1;Ontology_term=GO:0022900,GO:0008137,GO:0048038,GO:0051539,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417199.1;locus_tag=VMS06_RS00870;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_022649161.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 164289 164831 . - . ID=gene-VMS06_RS00875;Name=VMS06_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00875 NZ_JAVXZI010000001.1 Protein Homology CDS 164289 164831 . - 0 ID=cds-WP_003862138.1;Parent=gene-VMS06_RS00875;Dbxref=GenBank:WP_003862138.1;Name=WP_003862138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461769.1;locus_tag=VMS06_RS00875;product=formate hydrogenlyase complex iron-sulfur subunit;protein_id=WP_003862138.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 164841 166550 . - . ID=gene-VMS06_RS00880;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=VMS06_RS00880 NZ_JAVXZI010000001.1 Protein Homology CDS 164841 166550 . - 0 ID=cds-WP_022649163.1;Parent=gene-VMS06_RS00880;Dbxref=GenBank:WP_022649163.1;Name=WP_022649163.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=VMS06_RS00880;product=formate hydrogenlyase subunit HycE;protein_id=WP_022649163.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 166566 167489 . - . ID=gene-VMS06_RS00885;Name=VMS06_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00885 NZ_JAVXZI010000001.1 Protein Homology CDS 166566 167489 . - 0 ID=cds-WP_022649164.1;Parent=gene-VMS06_RS00885;Dbxref=GenBank:WP_022649164.1;Name=WP_022649164.1;Ontology_term=GO:0022900,GO:0016491,GO:0005886,GO:0016020,GO:1990204;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228432.1;locus_tag=VMS06_RS00885;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_022649164.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 167491 169305 . - . ID=gene-VMS06_RS00890;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=VMS06_RS00890 NZ_JAVXZI010000001.1 Protein Homology CDS 167491 169305 . - 0 ID=cds-WP_063147458.1;Parent=gene-VMS06_RS00890;Dbxref=GenBank:WP_063147458.1;Name=WP_063147458.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171367.1;locus_tag=VMS06_RS00890;product=formate hydrogenlyase subunit 3;protein_id=WP_063147458.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 169302 169910 . - . ID=gene-VMS06_RS00895;Name=VMS06_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00895 NZ_JAVXZI010000001.1 Protein Homology CDS 169302 169910 . - 0 ID=cds-WP_022649166.1;Parent=gene-VMS06_RS00895;Dbxref=GenBank:WP_022649166.1;Name=WP_022649166.1;Ontology_term=GO:0009061,GO:0019645,GO:0046872,GO:0051539;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692772.1;locus_tag=VMS06_RS00895;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_022649166.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 169984 170448 . - . ID=gene-VMS06_RS00900;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=VMS06_RS00900 NZ_JAVXZI010000001.1 Protein Homology CDS 169984 170448 . - 0 ID=cds-WP_022649167.1;Parent=gene-VMS06_RS00900;Dbxref=GenBank:WP_022649167.1;Name=WP_022649167.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434482.1;locus_tag=VMS06_RS00900;product=formate hydrogenlyase regulator HycA;protein_id=WP_022649167.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 170659 171009 . + . ID=gene-VMS06_RS00905;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=VMS06_RS00905 NZ_JAVXZI010000001.1 Protein Homology CDS 170659 171009 . + 0 ID=cds-WP_022649168.1;Parent=gene-VMS06_RS00905;Dbxref=GenBank:WP_022649168.1;Name=WP_022649168.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311609.1;locus_tag=VMS06_RS00905;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_022649168.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 171013 171876 . + . ID=gene-VMS06_RS00910;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=VMS06_RS00910 NZ_JAVXZI010000001.1 Protein Homology CDS 171013 171876 . + 0 ID=cds-WP_023298470.1;Parent=gene-VMS06_RS00910;Dbxref=GenBank:WP_023298470.1;Name=WP_023298470.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461776.1;locus_tag=VMS06_RS00910;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_023298470.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 171867 172139 . + . ID=gene-VMS06_RS00915;Name=VMS06_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00915 NZ_JAVXZI010000001.1 Protein Homology CDS 171867 172139 . + 0 ID=cds-WP_063147457.1;Parent=gene-VMS06_RS00915;Dbxref=GenBank:WP_063147457.1;Name=WP_063147457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461777.1;locus_tag=VMS06_RS00915;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_063147457.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 172143 173264 . + . ID=gene-VMS06_RS00920;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=VMS06_RS00920 NZ_JAVXZI010000001.1 Protein Homology CDS 172143 173264 . + 0 ID=cds-WP_063147456.1;Parent=gene-VMS06_RS00920;Dbxref=GenBank:WP_063147456.1;Name=WP_063147456.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311612.1;locus_tag=VMS06_RS00920;product=hydrogenase formation protein HypD;protein_id=WP_063147456.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 173261 174271 . + . ID=gene-VMS06_RS00925;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=VMS06_RS00925 NZ_JAVXZI010000001.1 Protein Homology CDS 173261 174271 . + 0 ID=cds-WP_063147455.1;Parent=gene-VMS06_RS00925;Dbxref=GenBank:WP_063147455.1;Name=WP_063147455.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417210.2;locus_tag=VMS06_RS00925;product=hydrogenase expression/formation protein HypE;protein_id=WP_063147455.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 174335 176407 . + . ID=gene-VMS06_RS00930;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=VMS06_RS00930 NZ_JAVXZI010000001.1 Protein Homology CDS 174335 176407 . + 0 ID=cds-WP_023330179.1;Parent=gene-VMS06_RS00930;Dbxref=GenBank:WP_023330179.1;Name=WP_023330179.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000122685.1;locus_tag=VMS06_RS00930;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_023330179.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 176538 176882 . - . ID=gene-VMS06_RS00935;Name=VMS06_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00935 NZ_JAVXZI010000001.1 Protein Homology CDS 176538 176882 . - 0 ID=cds-WP_074134664.1;Parent=gene-VMS06_RS00935;Dbxref=GenBank:WP_074134664.1;Name=WP_074134664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833066.1;locus_tag=VMS06_RS00935;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_074134664.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 177048 177278 . + . ID=gene-VMS06_RS00940;Name=VMS06_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00940 NZ_JAVXZI010000001.1 Protein Homology CDS 177048 177278 . + 0 ID=cds-WP_022649175.1;Parent=gene-VMS06_RS00940;Dbxref=GenBank:WP_022649175.1;Name=WP_022649175.1;Ontology_term=GO:0016070,GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811753.1;locus_tag=VMS06_RS00940;product=SymE family type I addiction module toxin;protein_id=WP_022649175.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 177392 179953 . + . ID=gene-VMS06_RS00945;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=VMS06_RS00945 NZ_JAVXZI010000001.1 Protein Homology CDS 177392 179953 . + 0 ID=cds-WP_022649176.1;Parent=gene-VMS06_RS00945;Dbxref=GenBank:WP_022649176.1;Name=WP_022649176.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228469.1;locus_tag=VMS06_RS00945;product=DNA mismatch repair protein MutS;protein_id=WP_022649176.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 180095 180316 . - . ID=gene-VMS06_RS00950;Name=VMS06_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00950 NZ_JAVXZI010000001.1 Protein Homology CDS 180095 180316 . - 0 ID=cds-WP_038416597.1;Parent=gene-VMS06_RS00950;Dbxref=GenBank:WP_038416597.1;Name=WP_038416597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098486.1;locus_tag=VMS06_RS00950;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_038416597.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 180327 181754 . - . ID=gene-VMS06_RS00955;Name=VMS06_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00955 NZ_JAVXZI010000001.1 Protein Homology CDS 180327 181754 . - 0 ID=cds-WP_022649178.1;Parent=gene-VMS06_RS00955;Dbxref=GenBank:WP_022649178.1;Name=WP_022649178.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311619.1;locus_tag=VMS06_RS00955;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_022649178.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 181744 182346 . - . ID=gene-VMS06_RS00960;Name=VMS06_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00960 NZ_JAVXZI010000001.1 Protein Homology CDS 181744 182346 . - 0 ID=cds-WP_003862111.1;Parent=gene-VMS06_RS00960;Dbxref=GenBank:WP_003862111.1;Name=WP_003862111.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883825.1;locus_tag=VMS06_RS00960;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_003862111.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 182519 182926 . + . ID=gene-VMS06_RS00965;Name=VMS06_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00965 NZ_JAVXZI010000001.1 Protein Homology CDS 182519 182926 . + 0 ID=cds-WP_022651767.1;Parent=gene-VMS06_RS00965;Dbxref=GenBank:WP_022651767.1;Name=WP_022651767.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811757.1;locus_tag=VMS06_RS00965;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_022651767.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 182923 183810 . - . ID=gene-VMS06_RS00970;Name=VMS06_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00970 NZ_JAVXZI010000001.1 Protein Homology CDS 182923 183810 . - 0 ID=cds-WP_063147453.1;Parent=gene-VMS06_RS00970;Dbxref=GenBank:WP_063147453.1;Name=WP_063147453.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382813.1;locus_tag=VMS06_RS00970;product=LysR family transcriptional regulator;protein_id=WP_063147453.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 183920 185122 . + . ID=gene-VMS06_RS00975;Name=VMS06_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00975 NZ_JAVXZI010000001.1 Protein Homology CDS 183920 185122 . + 0 ID=cds-WP_063147452.1;Parent=gene-VMS06_RS00975;Dbxref=GenBank:WP_063147452.1;Name=WP_063147452.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000222390.1;locus_tag=VMS06_RS00975;product=MFS transporter;protein_id=WP_063147452.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 185119 185496 . + . ID=gene-VMS06_RS00980;Name=VMS06_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00980 NZ_JAVXZI010000001.1 Protein Homology CDS 185119 185496 . + 0 ID=cds-WP_063147451.1;Parent=gene-VMS06_RS00980;Dbxref=GenBank:WP_063147451.1;Name=WP_063147451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178224.1;locus_tag=VMS06_RS00980;product=DUF4440 domain-containing protein;protein_id=WP_063147451.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 185547 186539 . - . ID=gene-VMS06_RS00985;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=VMS06_RS00985 NZ_JAVXZI010000001.1 Protein Homology CDS 185547 186539 . - 0 ID=cds-WP_022649182.1;Parent=gene-VMS06_RS00985;Dbxref=GenBank:WP_022649182.1;Name=WP_022649182.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=VMS06_RS00985;product=RNA polymerase sigma factor RpoS;protein_id=WP_022649182.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 186600 187673 . - . ID=gene-VMS06_RS00990;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=VMS06_RS00990 NZ_JAVXZI010000001.1 Protein Homology CDS 186600 187673 . - 0 ID=cds-WP_306307778.1;Parent=gene-VMS06_RS00990;Dbxref=GenBank:WP_306307778.1;Name=WP_306307778.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461846.1;locus_tag=VMS06_RS00990;product=murein hydrolase activator NlpD;protein_id=WP_306307778.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 187615 187746 . + . ID=gene-VMS06_RS00995;Name=VMS06_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS00995 NZ_JAVXZI010000001.1 Protein Homology CDS 187615 187746 . + 0 ID=cds-WP_306173474.1;Parent=gene-VMS06_RS00995;Dbxref=GenBank:WP_306173474.1;Name=WP_306173474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001607589.1;locus_tag=VMS06_RS00995;product=peptidase;protein_id=WP_306173474.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 187841 188467 . - . ID=gene-VMS06_RS01000;Name=VMS06_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01000 NZ_JAVXZI010000001.1 Protein Homology CDS 187841 188467 . - 0 ID=cds-WP_022649184.1;Parent=gene-VMS06_RS01000;Dbxref=GenBank:WP_022649184.1;Name=WP_022649184.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=VMS06_RS01000;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_022649184.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 188461 189222 . - . ID=gene-VMS06_RS01005;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=VMS06_RS01005 NZ_JAVXZI010000001.1 Protein Homology CDS 188461 189222 . - 0 ID=cds-WP_017382816.1;Parent=gene-VMS06_RS01005;Dbxref=GenBank:WP_017382816.1;Name=WP_017382816.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960208.1;locus_tag=VMS06_RS01005;product=5'/3'-nucleotidase SurE;protein_id=WP_017382816.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 189203 190252 . - . ID=gene-VMS06_RS01010;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=VMS06_RS01010 NZ_JAVXZI010000001.1 Protein Homology CDS 189203 190252 . - 0 ID=cds-WP_063147450.1;Parent=gene-VMS06_RS01010;Dbxref=GenBank:WP_063147450.1;Name=WP_063147450.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311626.1;locus_tag=VMS06_RS01010;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_063147450.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 190249 190728 . - . ID=gene-VMS06_RS01015;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=VMS06_RS01015 NZ_JAVXZI010000001.1 Protein Homology CDS 190249 190728 . - 0 ID=cds-WP_003862097.1;Parent=gene-VMS06_RS01015;Dbxref=GenBank:WP_003862097.1;Name=WP_003862097.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311627.1;locus_tag=VMS06_RS01015;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_003862097.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 190728 191438 . - . ID=gene-VMS06_RS01020;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=VMS06_RS01020 NZ_JAVXZI010000001.1 Protein Homology CDS 190728 191438 . - 0 ID=cds-WP_000741569.1;Parent=gene-VMS06_RS01020;Dbxref=GenBank:WP_000741569.1;Name=WP_000741569.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461851.1;locus_tag=VMS06_RS01020;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_000741569.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 191458 191769 . - . ID=gene-VMS06_RS01025;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=VMS06_RS01025 NZ_JAVXZI010000001.1 Protein Homology CDS 191458 191769 . - 0 ID=cds-WP_003862095.1;Parent=gene-VMS06_RS01025;Dbxref=GenBank:WP_003862095.1;Name=WP_003862095.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228485.1;locus_tag=VMS06_RS01025;product=cell division protein FtsB;protein_id=WP_003862095.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 191849 192175 . - . ID=gene-VMS06_RS01030;Name=VMS06_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01030 NZ_JAVXZI010000001.1 Protein Homology CDS 191849 192175 . - 0 ID=cds-WP_006811767.1;Parent=gene-VMS06_RS01030;Dbxref=GenBank:WP_006811767.1;Name=WP_006811767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004890137.1;locus_tag=VMS06_RS01030;product=DUF3561 family protein;protein_id=WP_006811767.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 192234 192839 . - . ID=gene-VMS06_RS01035;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=VMS06_RS01035 NZ_JAVXZI010000001.1 Protein Homology CDS 192234 192839 . - 0 ID=cds-WP_022649188.1;Parent=gene-VMS06_RS01035;Dbxref=GenBank:WP_022649188.1;Name=WP_022649188.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311631.1;locus_tag=VMS06_RS01035;product=adenylyl-sulfate kinase;protein_id=WP_022649188.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 192839 194263 . - . ID=gene-VMS06_RS01040;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=VMS06_RS01040 NZ_JAVXZI010000001.1 Protein Homology CDS 192839 194263 . - 0 ID=cds-WP_063147449.1;Parent=gene-VMS06_RS01040;Dbxref=GenBank:WP_063147449.1;Name=WP_063147449.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228488.1;locus_tag=VMS06_RS01040;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_063147449.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 194273 195181 . - . ID=gene-VMS06_RS01045;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=VMS06_RS01045 NZ_JAVXZI010000001.1 Protein Homology CDS 194273 195181 . - 0 ID=cds-WP_006811770.1;Parent=gene-VMS06_RS01045;Dbxref=GenBank:WP_006811770.1;Name=WP_006811770.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=VMS06_RS01045;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_006811770.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 195191 196549 . - . ID=gene-VMS06_RS01050;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=VMS06_RS01050 NZ_JAVXZI010000001.1 Protein Homology CDS 195191 196549 . - 0 ID=cds-WP_063147448.1;Parent=gene-VMS06_RS01050;Dbxref=GenBank:WP_063147448.1;Name=WP_063147448.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885034.1;locus_tag=VMS06_RS01050;product=siroheme synthase CysG;protein_id=WP_063147448.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 196787 197830 . + . ID=gene-VMS06_RS01055;Name=VMS06_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01055 NZ_JAVXZI010000001.1 Protein Homology CDS 196787 197830 . + 0 ID=cds-WP_063147447.1;Parent=gene-VMS06_RS01055;Dbxref=GenBank:WP_063147447.1;Name=WP_063147447.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883813.1;locus_tag=VMS06_RS01055;product=aminopeptidase;protein_id=WP_063147447.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 197924 198658 . - . ID=gene-VMS06_RS01060;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=VMS06_RS01060 NZ_JAVXZI010000001.1 Protein Homology CDS 197924 198658 . - 0 ID=cds-WP_063147446.1;Parent=gene-VMS06_RS01060;Dbxref=GenBank:WP_063147446.1;Name=WP_063147446.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228492.1;locus_tag=VMS06_RS01060;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_063147446.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 198758 200470 . - . ID=gene-VMS06_RS01065;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=VMS06_RS01065 NZ_JAVXZI010000001.1 Protein Homology CDS 198758 200470 . - 0 ID=cds-WP_023298486.1;Parent=gene-VMS06_RS01065;Dbxref=GenBank:WP_023298486.1;Name=WP_023298486.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=VMS06_RS01065;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_023298486.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 200470 202275 . - . ID=gene-VMS06_RS01070;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=VMS06_RS01070 NZ_JAVXZI010000001.1 Protein Homology CDS 200470 202275 . - 0 ID=cds-WP_063147445.1;Parent=gene-VMS06_RS01070;Dbxref=GenBank:WP_063147445.1;Name=WP_063147445.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311646.1;locus_tag=VMS06_RS01070;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_063147445.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 202579 202944 . + . ID=gene-VMS06_RS01075;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=VMS06_RS01075 NZ_JAVXZI010000001.1 Protein Homology CDS 202579 202944 . + 0 ID=cds-WP_006811776.1;Parent=gene-VMS06_RS01075;Dbxref=GenBank:WP_006811776.1;Name=WP_006811776.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228496.1;locus_tag=VMS06_RS01075;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_006811776.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 202929 205283 . - . ID=gene-VMS06_RS01080;Name=VMS06_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01080 NZ_JAVXZI010000001.1 Protein Homology CDS 202929 205283 . - 0 ID=cds-WP_063147443.1;Parent=gene-VMS06_RS01080;Dbxref=GenBank:WP_063147443.1;Name=WP_063147443.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382822.1;locus_tag=VMS06_RS01080;product=helix-turn-helix domain-containing protein;protein_id=WP_063147443.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 205455 206624 . + . ID=gene-VMS06_RS01085;Name=VMS06_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01085 NZ_JAVXZI010000001.1 Protein Homology CDS 205455 206624 . + 0 ID=cds-WP_022649197.1;Parent=gene-VMS06_RS01085;Dbxref=GenBank:WP_022649197.1;Name=WP_022649197.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226506.1;locus_tag=VMS06_RS01085;product=M20 aminoacylase family protein;protein_id=WP_022649197.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 206652 208049 . + . ID=gene-VMS06_RS01090;Name=VMS06_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01090 NZ_JAVXZI010000001.1 Protein Homology CDS 206652 208049 . + 0 ID=cds-WP_063147442.1;Parent=gene-VMS06_RS01090;Dbxref=GenBank:WP_063147442.1;Name=WP_063147442.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382823.1;locus_tag=VMS06_RS01090;product=MFS transporter;protein_id=WP_063147442.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 208067 208738 . - . ID=gene-VMS06_RS01095;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=VMS06_RS01095 NZ_JAVXZI010000001.1 Protein Homology CDS 208067 208738 . - 0 ID=cds-WP_006811780.1;Parent=gene-VMS06_RS01095;Dbxref=GenBank:WP_006811780.1;Name=WP_006811780.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=VMS06_RS01095;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_006811780.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 208793 209500 . - . ID=gene-VMS06_RS01100;Name=VMS06_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01100 NZ_JAVXZI010000001.1 Protein Homology CDS 208793 209500 . - 0 ID=cds-WP_023298492.1;Parent=gene-VMS06_RS01100;Dbxref=GenBank:WP_023298492.1;Name=WP_023298492.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434580.1;locus_tag=VMS06_RS01100;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_023298492.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 209500 211059 . - . ID=gene-VMS06_RS01105;Name=VMS06_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01105 NZ_JAVXZI010000001.1 Protein Homology CDS 209500 211059 . - 0 ID=cds-WP_063147486.1;Parent=gene-VMS06_RS01105;Dbxref=GenBank:WP_063147486.1;Name=WP_063147486.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001817032.1;locus_tag=VMS06_RS01105;product=maltose/glucose-specific PTS transporter subunit IIC;protein_id=WP_063147486.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 211226 212050 . + . ID=gene-VMS06_RS01110;Name=VMS06_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01110 NZ_JAVXZI010000001.1 Protein Homology CDS 211226 212050 . + 0 ID=cds-WP_063147441.1;Parent=gene-VMS06_RS01110;Dbxref=GenBank:WP_063147441.1;Name=WP_063147441.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077578.1;locus_tag=VMS06_RS01110;product=MurR/RpiR family transcriptional regulator;protein_id=WP_063147441.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 212103 213401 . - . ID=gene-VMS06_RS01115;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=VMS06_RS01115 NZ_JAVXZI010000001.1 Protein Homology CDS 212103 213401 . - 0 ID=cds-WP_022649201.1;Parent=gene-VMS06_RS01115;Dbxref=GenBank:WP_022649201.1;Name=WP_022649201.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=VMS06_RS01115;product=phosphopyruvate hydratase;protein_id=WP_022649201.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 213484 215121 . - . ID=gene-VMS06_RS01120;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=VMS06_RS01120 NZ_JAVXZI010000001.1 Protein Homology CDS 213484 215121 . - 0 ID=cds-WP_022649202.1;Parent=gene-VMS06_RS01120;Dbxref=GenBank:WP_022649202.1;Name=WP_022649202.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=VMS06_RS01120;product=glutamine hydrolyzing CTP synthase;protein_id=WP_022649202.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 215345 216136 . - . ID=gene-VMS06_RS01125;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=VMS06_RS01125 NZ_JAVXZI010000001.1 Protein Homology CDS 215345 216136 . - 0 ID=cds-WP_003862720.1;Parent=gene-VMS06_RS01125;Dbxref=GenBank:WP_003862720.1;Name=WP_003862720.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228502.1;locus_tag=VMS06_RS01125;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_003862720.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 216203 218434 . - . ID=gene-VMS06_RS01130;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=VMS06_RS01130 NZ_JAVXZI010000001.1 Protein Homology CDS 216203 218434 . - 0 ID=cds-WP_022649204.1;Parent=gene-VMS06_RS01130;Dbxref=GenBank:WP_022649204.1;Name=WP_022649204.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461877.1;locus_tag=VMS06_RS01130;product=GTP diphosphokinase;protein_id=WP_022649204.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 218486 219784 . - . ID=gene-VMS06_RS01135;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=VMS06_RS01135 NZ_JAVXZI010000001.1 Protein Homology CDS 218486 219784 . - 0 ID=cds-WP_063147440.1;Parent=gene-VMS06_RS01135;Dbxref=GenBank:WP_063147440.1;Name=WP_063147440.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178262.1;locus_tag=VMS06_RS01135;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_063147440.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 219842 222601 . + . ID=gene-VMS06_RS01140;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=VMS06_RS01140 NZ_JAVXZI010000001.1 Protein Homology CDS 219842 222601 . + 0 ID=cds-WP_022649206.1;Parent=gene-VMS06_RS01140;Dbxref=GenBank:WP_022649206.1;Name=WP_022649206.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382829.1;locus_tag=VMS06_RS01140;product=two-component sensor histidine kinase BarA;protein_id=WP_022649206.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 222651 223796 . - . ID=gene-VMS06_RS01145;Name=VMS06_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01145 NZ_JAVXZI010000001.1 Protein Homology CDS 222651 223796 . - 0 ID=cds-WP_063147439.1;Parent=gene-VMS06_RS01145;Dbxref=GenBank:WP_063147439.1;Name=WP_063147439.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382830.1;locus_tag=VMS06_RS01145;product=glycerate kinase;protein_id=WP_063147439.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 223874 225211 . - . ID=gene-VMS06_RS01150;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=VMS06_RS01150 NZ_JAVXZI010000001.1 Protein Homology CDS 223874 225211 . - 0 ID=cds-WP_063147438.1;Parent=gene-VMS06_RS01150;Dbxref=GenBank:WP_063147438.1;Name=WP_063147438.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833097.1;locus_tag=VMS06_RS01150;product=glucarate dehydratase;protein_id=WP_063147438.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 225227 226567 . - . ID=gene-VMS06_RS01155;Name=VMS06_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01155 NZ_JAVXZI010000001.1 Protein Homology CDS 225227 226567 . - 0 ID=cds-WP_023298498.1;Parent=gene-VMS06_RS01155;Dbxref=GenBank:WP_023298498.1;Name=WP_023298498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461882.1;locus_tag=VMS06_RS01155;product=enolase C-terminal domain-like protein;protein_id=WP_023298498.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 226567 227922 . - . ID=gene-VMS06_RS01160;Name=gudP;gbkey=Gene;gene=gudP;gene_biotype=protein_coding;locus_tag=VMS06_RS01160 NZ_JAVXZI010000001.1 Protein Homology CDS 226567 227922 . - 0 ID=cds-WP_003862734.1;Parent=gene-VMS06_RS01160;Dbxref=GenBank:WP_003862734.1;Name=WP_003862734.1;gbkey=CDS;gene=gudP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833099.1;locus_tag=VMS06_RS01160;product=galactarate/glucarate/glycerate transporter GudP;protein_id=WP_003862734.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 228231 228680 . - . ID=gene-VMS06_RS01165;Name=VMS06_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01165 NZ_JAVXZI010000001.1 Protein Homology CDS 228231 228680 . - 0 ID=cds-WP_022649212.1;Parent=gene-VMS06_RS01165;Dbxref=GenBank:WP_022649212.1;Name=WP_022649212.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311677.1;locus_tag=VMS06_RS01165;product=flavodoxin;protein_id=WP_022649212.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 228696 229481 . - . ID=gene-VMS06_RS01170;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=VMS06_RS01170 NZ_JAVXZI010000001.1 Protein Homology CDS 228696 229481 . - 0 ID=cds-WP_058646255.1;Parent=gene-VMS06_RS01170;Dbxref=GenBank:WP_058646255.1;Name=WP_058646255.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434640.1;locus_tag=VMS06_RS01170;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_058646255.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 229478 229807 . - . ID=gene-VMS06_RS01175;Name=VMS06_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01175 NZ_JAVXZI010000001.1 Protein Homology CDS 229478 229807 . - 0 ID=cds-WP_022649214.1;Parent=gene-VMS06_RS01175;Dbxref=GenBank:WP_022649214.1;Name=WP_022649214.1;Ontology_term=GO:0044010;gbkey=CDS;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382834.1;locus_tag=VMS06_RS01175;product=YqcC family protein;protein_id=WP_022649214.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 230440 230985 . - . ID=gene-VMS06_RS01180;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=VMS06_RS01180 NZ_JAVXZI010000001.1 Protein Homology CDS 230440 230985 . - 0 ID=cds-WP_022649215.1;Parent=gene-VMS06_RS01180;Dbxref=GenBank:WP_022649215.1;Name=WP_022649215.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461887.1;locus_tag=VMS06_RS01180;product=SecY-interacting protein;protein_id=WP_022649215.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 231055 231897 . + . ID=gene-VMS06_RS01185;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=VMS06_RS01185 NZ_JAVXZI010000001.1 Protein Homology CDS 231055 231897 . + 0 ID=cds-WP_023298501.1;Parent=gene-VMS06_RS01185;Dbxref=GenBank:WP_023298501.1;Name=WP_023298501.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883795.1;locus_tag=VMS06_RS01185;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_023298501.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 232014 233378 . + . ID=gene-VMS06_RS01190;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=VMS06_RS01190 NZ_JAVXZI010000001.1 Protein Homology CDS 232014 233378 . + 0 ID=cds-WP_023298502.1;Parent=gene-VMS06_RS01190;Dbxref=GenBank:WP_023298502.1;Name=WP_023298502.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862748.1;locus_tag=VMS06_RS01190;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_023298502.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 233883 235172 . + . ID=gene-VMS06_RS01195;Name=VMS06_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01195 NZ_JAVXZI010000001.1 Protein Homology CDS 233883 235172 . + 0 ID=cds-WP_022649218.1;Parent=gene-VMS06_RS01195;Dbxref=GenBank:WP_022649218.1;Name=WP_022649218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228516.1;locus_tag=VMS06_RS01195;product=HAAAP family serine/threonine permease;protein_id=WP_022649218.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 235235 236602 . + . ID=gene-VMS06_RS01200;Name=VMS06_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01200 NZ_JAVXZI010000001.1 Protein Homology CDS 235235 236602 . + 0 ID=cds-WP_022649219.1;Parent=gene-VMS06_RS01200;Dbxref=GenBank:WP_022649219.1;Name=WP_022649219.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461891.2;locus_tag=VMS06_RS01200;product=L-serine ammonia-lyase;protein_id=WP_022649219.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 236715 237470 . + . ID=gene-VMS06_RS01205;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=VMS06_RS01205 NZ_JAVXZI010000001.1 Protein Homology CDS 236715 237470 . + 0 ID=cds-WP_063147436.1;Parent=gene-VMS06_RS01205;Dbxref=GenBank:WP_063147436.1;Name=WP_063147436.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228529.1;locus_tag=VMS06_RS01205;product=flap endonuclease Xni;protein_id=WP_063147436.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 237528 238628 . - . ID=gene-VMS06_RS01210;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=VMS06_RS01210 NZ_JAVXZI010000001.1 Protein Homology CDS 237528 238628 . - 0 ID=cds-WP_022649221.1;Parent=gene-VMS06_RS01210;Dbxref=GenBank:WP_022649221.1;Name=WP_022649221.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=VMS06_RS01210;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_022649221.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 238621 239016 . - . ID=gene-VMS06_RS01215;Name=VMS06_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01215 NZ_JAVXZI010000001.1 Protein Homology CDS 238621 239016 . - 0 ID=cds-WP_003862756.1;Parent=gene-VMS06_RS01215;Dbxref=GenBank:WP_003862756.1;Name=WP_003862756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228539.1;locus_tag=VMS06_RS01215;product=DUF423 domain-containing protein;protein_id=WP_003862756.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 239056 239973 . - . ID=gene-VMS06_RS01220;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=VMS06_RS01220 NZ_JAVXZI010000001.1 Protein Homology CDS 239056 239973 . - 0 ID=cds-WP_022649222.1;Parent=gene-VMS06_RS01220;Dbxref=GenBank:WP_022649222.1;Name=WP_022649222.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=VMS06_RS01220;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_022649222.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 240324 240551 . - . ID=gene-VMS06_RS01225;Name=VMS06_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01225 NZ_JAVXZI010000001.1 Protein Homology CDS 240324 240551 . - 0 ID=cds-WP_015571738.1;Parent=gene-VMS06_RS01225;Dbxref=GenBank:WP_015571738.1;Name=WP_015571738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862759.1;locus_tag=VMS06_RS01225;product=YgdI/YgdR family lipoprotein;protein_id=WP_015571738.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 240744 241949 . + . ID=gene-VMS06_RS01230;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=VMS06_RS01230 NZ_JAVXZI010000001.1 Protein Homology CDS 240744 241949 . + 0 ID=cds-WP_063147435.1;Parent=gene-VMS06_RS01230;Dbxref=GenBank:WP_063147435.1;Name=WP_063147435.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417290.1;locus_tag=VMS06_RS01230;product=cysteine desulfurase CsdA;protein_id=WP_063147435.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 241949 242395 . + . ID=gene-VMS06_RS01235;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=VMS06_RS01235 NZ_JAVXZI010000001.1 Protein Homology CDS 241949 242395 . + 0 ID=cds-WP_023298505.1;Parent=gene-VMS06_RS01235;Dbxref=GenBank:WP_023298505.1;Name=WP_023298505.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811803.1;locus_tag=VMS06_RS01235;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_023298505.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 242386 243192 . - . ID=gene-VMS06_RS01240;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=VMS06_RS01240 NZ_JAVXZI010000001.1 Protein Homology CDS 242386 243192 . - 0 ID=cds-WP_006811804.1;Parent=gene-VMS06_RS01240;Dbxref=GenBank:WP_006811804.1;Name=WP_006811804.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862764.1;locus_tag=VMS06_RS01240;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_006811804.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 243268 244365 . - . ID=gene-VMS06_RS01245;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=VMS06_RS01245 NZ_JAVXZI010000001.1 Protein Homology CDS 243268 244365 . - 0 ID=cds-WP_022649225.1;Parent=gene-VMS06_RS01245;Dbxref=GenBank:WP_022649225.1;Name=WP_022649225.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=VMS06_RS01245;product=murein transglycosylase A;protein_id=WP_022649225.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 244574 244650 . + . ID=gene-VMS06_RS01250;Name=VMS06_RS01250;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS01250 NZ_JAVXZI010000001.1 tRNAscan-SE tRNA 244574 244650 . + . ID=rna-VMS06_RS01250;Parent=gene-VMS06_RS01250;anticodon=(pos:244608..244610);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS01250;product=tRNA-Met NZ_JAVXZI010000001.1 tRNAscan-SE exon 244574 244650 . + . ID=exon-VMS06_RS01250-1;Parent=rna-VMS06_RS01250;anticodon=(pos:244608..244610);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS01250;product=tRNA-Met NZ_JAVXZI010000001.1 RefSeq gene 244695 244771 . + . ID=gene-VMS06_RS01255;Name=VMS06_RS01255;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS01255 NZ_JAVXZI010000001.1 tRNAscan-SE tRNA 244695 244771 . + . ID=rna-VMS06_RS01255;Parent=gene-VMS06_RS01255;anticodon=(pos:244729..244731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS01255;product=tRNA-Met NZ_JAVXZI010000001.1 tRNAscan-SE exon 244695 244771 . + . ID=exon-VMS06_RS01255-1;Parent=rna-VMS06_RS01255;anticodon=(pos:244729..244731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS01255;product=tRNA-Met NZ_JAVXZI010000001.1 RefSeq gene 244816 244892 . + . ID=gene-VMS06_RS01260;Name=VMS06_RS01260;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS01260 NZ_JAVXZI010000001.1 tRNAscan-SE tRNA 244816 244892 . + . ID=rna-VMS06_RS01260;Parent=gene-VMS06_RS01260;anticodon=(pos:244850..244852);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS01260;product=tRNA-Met NZ_JAVXZI010000001.1 tRNAscan-SE exon 244816 244892 . + . ID=exon-VMS06_RS01260-1;Parent=rna-VMS06_RS01260;anticodon=(pos:244850..244852);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS01260;product=tRNA-Met NZ_JAVXZI010000001.1 RefSeq gene 244982 246235 . - . ID=gene-VMS06_RS01265;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=VMS06_RS01265 NZ_JAVXZI010000001.1 Protein Homology CDS 244982 246235 . - 0 ID=cds-WP_022649226.1;Parent=gene-VMS06_RS01265;Dbxref=GenBank:WP_022649226.1;Name=WP_022649226.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiC;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311701.2;locus_tag=VMS06_RS01265;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_022649226.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 246463 247794 . + . ID=gene-VMS06_RS01270;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=VMS06_RS01270 NZ_JAVXZI010000001.1 Protein Homology CDS 246463 247794 . + 0 ID=cds-WP_022649227.1;Parent=gene-VMS06_RS01270;Dbxref=GenBank:WP_022649227.1;Name=WP_022649227.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311702.1;locus_tag=VMS06_RS01270;product=amino-acid N-acetyltransferase;protein_id=WP_022649227.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 247828 249648 . - . ID=gene-VMS06_RS01275;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=VMS06_RS01275 NZ_JAVXZI010000001.1 Protein Homology CDS 247828 249648 . - 0 ID=cds-WP_063843666.1;Parent=gene-VMS06_RS01275;Dbxref=GenBank:WP_063843666.1;Name=WP_063843666.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098543.1;locus_tag=VMS06_RS01275;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_063843666.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 249645 253187 . - . ID=gene-VMS06_RS01280;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=VMS06_RS01280 NZ_JAVXZI010000001.1 Protein Homology CDS 249645 253187 . - 0 ID=cds-WP_058676759.1;Parent=gene-VMS06_RS01280;Dbxref=GenBank:WP_058676759.1;Name=WP_058676759.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686975.1;locus_tag=VMS06_RS01280;product=exodeoxyribonuclease V subunit beta;protein_id=WP_058676759.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 253184 256066 . - . ID=gene-VMS06_RS01285;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=VMS06_RS01285 NZ_JAVXZI010000001.1 Protein Homology CDS 253184 256066 . - 0 ID=cds-WP_063147433.1;Parent=gene-VMS06_RS01285;Dbxref=GenBank:WP_063147433.1;Name=WP_063147433.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692739.1;locus_tag=VMS06_RS01285;product=pitrilysin;protein_id=WP_063147433.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 256206 259580 . - . ID=gene-VMS06_RS01290;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=VMS06_RS01290 NZ_JAVXZI010000001.1 Protein Homology CDS 256206 259580 . - 0 ID=cds-WP_063147432.1;Parent=gene-VMS06_RS01290;Dbxref=GenBank:WP_063147432.1;Name=WP_063147432.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417299.1;locus_tag=VMS06_RS01290;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_063147432.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 259593 259916 . - . ID=gene-VMS06_RS01295;Name=VMS06_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01295 NZ_JAVXZI010000001.1 Protein Homology CDS 259593 259916 . - 0 ID=cds-WP_023298509.1;Parent=gene-VMS06_RS01295;Dbxref=GenBank:WP_023298509.1;Name=WP_023298509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382845.1;locus_tag=VMS06_RS01295;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_023298509.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 259901 260299 . - . ID=gene-VMS06_RS01300;Name=VMS06_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01300 NZ_JAVXZI010000001.1 Protein Homology CDS 259901 260299 . - 0 ID=cds-WP_063147431.1;Parent=gene-VMS06_RS01300;Dbxref=GenBank:WP_063147431.1;Name=WP_063147431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382846.1;locus_tag=VMS06_RS01300;product=DUF2509 family protein;protein_id=WP_063147431.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 260296 260856 . - . ID=gene-VMS06_RS01305;Name=VMS06_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01305 NZ_JAVXZI010000001.1 Protein Homology CDS 260296 260856 . - 0 ID=cds-WP_063147430.1;Parent=gene-VMS06_RS01305;Dbxref=GenBank:WP_063147430.1;Name=WP_063147430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811814.1;locus_tag=VMS06_RS01305;product=prepilin peptidase-dependent protein;protein_id=WP_063147430.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 260847 261311 . - . ID=gene-VMS06_RS01310;Name=VMS06_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01310 NZ_JAVXZI010000001.1 Protein Homology CDS 260847 261311 . - 0 ID=cds-WP_063147429.1;Parent=gene-VMS06_RS01310;Dbxref=GenBank:WP_063147429.1;Name=WP_063147429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692737.1;locus_tag=VMS06_RS01310;product=prepilin peptidase-dependent protein;protein_id=WP_063147429.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 261496 262290 . - . ID=gene-VMS06_RS01315;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=VMS06_RS01315 NZ_JAVXZI010000001.1 Protein Homology CDS 261496 262290 . - 0 ID=cds-WP_006811817.1;Parent=gene-VMS06_RS01315;Dbxref=GenBank:WP_006811817.1;Name=WP_006811817.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=VMS06_RS01315;product=thymidylate synthase;protein_id=WP_006811817.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 262297 263172 . - . ID=gene-VMS06_RS01320;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=VMS06_RS01320 NZ_JAVXZI010000001.1 Protein Homology CDS 262297 263172 . - 0 ID=cds-WP_022649236.1;Parent=gene-VMS06_RS01320;Dbxref=GenBank:WP_022649236.1;Name=WP_022649236.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461919.1;locus_tag=VMS06_RS01320;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_022649236.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 263401 265647 . - . ID=gene-VMS06_RS01325;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=VMS06_RS01325 NZ_JAVXZI010000001.1 Protein Homology CDS 263401 265647 . - 0 ID=cds-WP_063147428.1;Parent=gene-VMS06_RS01325;Dbxref=GenBank:WP_063147428.1;Name=WP_063147428.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311713.1;locus_tag=VMS06_RS01325;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_063147428.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 265660 266190 . - . ID=gene-VMS06_RS01330;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=VMS06_RS01330 NZ_JAVXZI010000001.1 Protein Homology CDS 265660 266190 . - 0 ID=cds-WP_032622373.1;Parent=gene-VMS06_RS01330;Dbxref=GenBank:WP_032622373.1;Name=WP_032622373.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=VMS06_RS01330;product=RNA pyrophosphohydrolase;protein_id=WP_032622373.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq pseudogene 266645 266719 . + . ID=gene-VMS06_RS01335;Name=VMS06_RS01335;end_range=266719,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS01335;partial=true;pseudo=true NZ_JAVXZI010000001.1 Protein Homology CDS 266645 266719 . + 0 ID=cds-VMS06_RS01335;Parent=gene-VMS06_RS01335;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=266719,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228603.1;locus_tag=VMS06_RS01335;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 266875 267567 . + . ID=gene-VMS06_RS01340;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=VMS06_RS01340 NZ_JAVXZI010000001.1 Protein Homology CDS 266875 267567 . + 0 ID=cds-WP_022649239.1;Parent=gene-VMS06_RS01340;Dbxref=GenBank:WP_022649239.1;Name=WP_022649239.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883777.1;locus_tag=VMS06_RS01340;product=DNA mismatch repair endonuclease MutH;protein_id=WP_022649239.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 267696 267914 . + . ID=gene-VMS06_RS01345;Name=VMS06_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01345 NZ_JAVXZI010000001.1 Protein Homology CDS 267696 267914 . + 0 ID=cds-WP_003862794.1;Parent=gene-VMS06_RS01345;Dbxref=GenBank:WP_003862794.1;Name=WP_003862794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499668.1;locus_tag=VMS06_RS01345;product=YgdI/YgdR family lipoprotein;protein_id=WP_003862794.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 268047 269087 . + . ID=gene-VMS06_RS01350;Name=VMS06_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01350 NZ_JAVXZI010000001.1 Protein Homology CDS 268047 269087 . + 0 ID=cds-WP_015571754.1;Parent=gene-VMS06_RS01350;Dbxref=GenBank:WP_015571754.1;Name=WP_015571754.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417311.1;locus_tag=VMS06_RS01350;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_015571754.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 269193 270386 . - . ID=gene-VMS06_RS01355;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=VMS06_RS01355 NZ_JAVXZI010000001.1 Protein Homology CDS 269193 270386 . - 0 ID=cds-WP_022649240.1;Parent=gene-VMS06_RS01355;Dbxref=GenBank:WP_022649240.1;Name=WP_022649240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499670.1;locus_tag=VMS06_RS01355;product=lysophospholipid transporter LplT;protein_id=WP_022649240.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 270379 272538 . - . ID=gene-VMS06_RS01360;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=VMS06_RS01360 NZ_JAVXZI010000001.1 Protein Homology CDS 270379 272538 . - 0 ID=cds-WP_063147427.1;Parent=gene-VMS06_RS01360;Dbxref=GenBank:WP_063147427.1;Name=WP_063147427.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862804.1;locus_tag=VMS06_RS01360;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_063147427.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 273156 274178 . + . ID=gene-VMS06_RS01365;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=VMS06_RS01365 NZ_JAVXZI010000001.1 Protein Homology CDS 273156 274178 . + 0 ID=cds-WP_003862806.1;Parent=gene-VMS06_RS01365;Dbxref=GenBank:WP_003862806.1;Name=WP_003862806.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571756.1;locus_tag=VMS06_RS01365;product=HTH-type transcriptional regulator GalR;protein_id=WP_003862806.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 274133 274609 . - . ID=gene-VMS06_RS01370;Name=VMS06_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01370 NZ_JAVXZI010000001.1 Protein Homology CDS 274133 274609 . - 0 ID=cds-WP_023306858.1;Parent=gene-VMS06_RS01370;Dbxref=GenBank:WP_023306858.1;Name=WP_023306858.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862808.1;locus_tag=VMS06_RS01370;product=GNAT family N-acetyltransferase;protein_id=WP_023306858.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 274606 275379 . - . ID=gene-VMS06_RS01375;Name=VMS06_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01375 NZ_JAVXZI010000001.1 Protein Homology CDS 274606 275379 . - 0 ID=cds-WP_022649243.1;Parent=gene-VMS06_RS01375;Dbxref=GenBank:WP_022649243.1;Name=WP_022649243.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435154.1;locus_tag=VMS06_RS01375;product=GntR family transcriptional regulator;protein_id=WP_022649243.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 275458 276885 . - . ID=gene-VMS06_RS01380;Name=VMS06_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01380 NZ_JAVXZI010000001.1 Protein Homology CDS 275458 276885 . - 0 ID=cds-WP_023298517.1;Parent=gene-VMS06_RS01380;Dbxref=GenBank:WP_023298517.1;Name=WP_023298517.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178325.1;locus_tag=VMS06_RS01380;product=glycoside hydrolase family 1 protein;protein_id=WP_023298517.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 276893 278218 . - . ID=gene-VMS06_RS01385;Name=VMS06_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01385 NZ_JAVXZI010000001.1 Protein Homology CDS 276893 278218 . - 0 ID=cds-WP_006811828.1;Parent=gene-VMS06_RS01385;Dbxref=GenBank:WP_006811828.1;Name=WP_006811828.1;Ontology_term=GO:0009401,GO:0016773,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862812.1;locus_tag=VMS06_RS01385;product=PTS sugar transporter subunit IIC;protein_id=WP_006811828.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 278518 279555 . + . ID=gene-VMS06_RS01390;Name=VMS06_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01390 NZ_JAVXZI010000001.1 Protein Homology CDS 278518 279555 . + 0 ID=cds-WP_022649245.1;Parent=gene-VMS06_RS01390;Dbxref=GenBank:WP_022649245.1;Name=WP_022649245.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178327.1;locus_tag=VMS06_RS01390;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_022649245.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 279525 280787 . - . ID=gene-VMS06_RS01395;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=VMS06_RS01395 NZ_JAVXZI010000001.1 Protein Homology CDS 279525 280787 . - 0 ID=cds-WP_063147426.1;Parent=gene-VMS06_RS01395;Dbxref=GenBank:WP_063147426.1;Name=WP_063147426.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686955.1;locus_tag=VMS06_RS01395;product=diaminopimelate decarboxylase;protein_id=WP_063147426.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 280908 281834 . + . ID=gene-VMS06_RS01400;Name=VMS06_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01400 NZ_JAVXZI010000001.1 Protein Homology CDS 280908 281834 . + 0 ID=cds-WP_022649247.1;Parent=gene-VMS06_RS01400;Dbxref=GenBank:WP_022649247.1;Name=WP_022649247.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862817.1;locus_tag=VMS06_RS01400;product=LysR family transcriptional regulator;protein_id=WP_022649247.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 281829 282521 . - . ID=gene-VMS06_RS01405;Name=VMS06_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01405 NZ_JAVXZI010000001.1 Protein Homology CDS 281829 282521 . - 0 ID=cds-WP_063147425.1;Parent=gene-VMS06_RS01405;Dbxref=GenBank:WP_063147425.1;Name=WP_063147425.1;Ontology_term=GO:0008152,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311724.1;locus_tag=VMS06_RS01405;product=aspartate/glutamate racemase;protein_id=WP_063147425.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 282657 282980 . + . ID=gene-VMS06_RS01410;Name=VMS06_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01410 NZ_JAVXZI010000001.1 Protein Homology CDS 282657 282980 . + 0 ID=cds-WP_022649249.1;Parent=gene-VMS06_RS01410;Dbxref=GenBank:WP_022649249.1;Name=WP_022649249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862821.1;locus_tag=VMS06_RS01410;product=cupin domain-containing protein;protein_id=WP_022649249.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 283014 284150 . - . ID=gene-VMS06_RS01415;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=VMS06_RS01415 NZ_JAVXZI010000001.1 Protein Homology CDS 283014 284150 . - 0 ID=cds-WP_023298520.1;Parent=gene-VMS06_RS01415;Dbxref=GenBank:WP_023298520.1;Name=WP_023298520.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692725.1;locus_tag=VMS06_RS01415;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_023298520.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 284694 285584 . + . ID=gene-VMS06_RS01420;Name=VMS06_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01420 NZ_JAVXZI010000001.1 Protein Homology CDS 284694 285584 . + 0 ID=cds-WP_003862825.1;Parent=gene-VMS06_RS01420;Dbxref=GenBank:WP_003862825.1;Name=WP_003862825.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228621.1;locus_tag=VMS06_RS01420;product=carbohydrate ABC transporter permease;protein_id=WP_003862825.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 285577 286479 . + . ID=gene-VMS06_RS01425;Name=VMS06_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01425 NZ_JAVXZI010000001.1 Protein Homology CDS 285577 286479 . + 0 ID=cds-WP_022649251.1;Parent=gene-VMS06_RS01425;Dbxref=GenBank:WP_022649251.1;Name=WP_022649251.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228622.1;locus_tag=VMS06_RS01425;product=carbohydrate ABC transporter permease;protein_id=WP_022649251.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 286492 287619 . + . ID=gene-VMS06_RS01430;Name=VMS06_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01430 NZ_JAVXZI010000001.1 Protein Homology CDS 286492 287619 . + 0 ID=cds-WP_038416631.1;Parent=gene-VMS06_RS01430;Dbxref=GenBank:WP_038416631.1;Name=WP_038416631.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228623.1;locus_tag=VMS06_RS01430;product=ABC transporter ATP-binding protein;protein_id=WP_038416631.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 287633 288919 . + . ID=gene-VMS06_RS01435;Name=VMS06_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01435 NZ_JAVXZI010000001.1 Protein Homology CDS 287633 288919 . + 0 ID=cds-WP_023298522.1;Parent=gene-VMS06_RS01435;Dbxref=GenBank:WP_023298522.1;Name=WP_023298522.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228624.1;locus_tag=VMS06_RS01435;product=ABC transporter substrate-binding protein;protein_id=WP_023298522.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 288990 290405 . - . ID=gene-VMS06_RS01440;Name=araE;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=VMS06_RS01440 NZ_JAVXZI010000001.1 Protein Homology CDS 288990 290405 . - 0 ID=cds-WP_022649253.1;Parent=gene-VMS06_RS01440;Dbxref=GenBank:WP_022649253.1;Name=WP_022649253.1;gbkey=CDS;gene=araE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461933.1;locus_tag=VMS06_RS01440;product=arabinose-proton symporter AraE;protein_id=WP_022649253.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 290718 291479 . - . ID=gene-VMS06_RS01445;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=VMS06_RS01445 NZ_JAVXZI010000001.1 Protein Homology CDS 290718 291479 . - 0 ID=cds-WP_003862835.1;Parent=gene-VMS06_RS01445;Dbxref=GenBank:WP_003862835.1;Name=WP_003862835.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228631.1;locus_tag=VMS06_RS01445;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_003862835.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 291543 292379 . - . ID=gene-VMS06_RS01450;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=VMS06_RS01450 NZ_JAVXZI010000001.1 Protein Homology CDS 291543 292379 . - 0 ID=cds-WP_017382863.1;Parent=gene-VMS06_RS01450;Dbxref=GenBank:WP_017382863.1;Name=WP_017382863.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098576.1;locus_tag=VMS06_RS01450;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_017382863.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 292680 293855 . + . ID=gene-VMS06_RS01455;Name=VMS06_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01455 NZ_JAVXZI010000001.1 Protein Homology CDS 292680 293855 . + 0 ID=cds-WP_022649254.1;Parent=gene-VMS06_RS01455;Dbxref=GenBank:WP_022649254.1;Name=WP_022649254.1;Ontology_term=GO:0045490,GO:0047487;gbkey=CDS;go_function=oligogalacturonide lyase activity|0047487||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228633.1;locus_tag=VMS06_RS01455;product=oligogalacturonate lyase family protein;protein_id=WP_022649254.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 294388 295071 . - . ID=gene-VMS06_RS01460;Name=VMS06_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01460 NZ_JAVXZI010000001.1 Protein Homology CDS 294388 295071 . - 0 ID=cds-WP_022649255.1;Parent=gene-VMS06_RS01460;Dbxref=GenBank:WP_022649255.1;Name=WP_022649255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228634.1;locus_tag=VMS06_RS01460;product=oligogalacturonate-specific porin KdgM family protein;protein_id=WP_022649255.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 295389 296567 . - . ID=gene-VMS06_RS01465;Name=VMS06_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01465 NZ_JAVXZI010000001.1 Protein Homology CDS 295389 296567 . - 0 ID=cds-WP_032626064.1;Parent=gene-VMS06_RS01465;Dbxref=GenBank:WP_032626064.1;Name=WP_032626064.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178345.1;locus_tag=VMS06_RS01465;product=acetyl-CoA C-acetyltransferase;protein_id=WP_032626064.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 296660 297526 . - . ID=gene-VMS06_RS01470;Name=VMS06_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01470 NZ_JAVXZI010000001.1 Protein Homology CDS 296660 297526 . - 0 ID=cds-WP_032626067.1;Parent=gene-VMS06_RS01470;Dbxref=GenBank:WP_032626067.1;Name=WP_032626067.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833153.1;locus_tag=VMS06_RS01470;product=LysR family transcriptional regulator;protein_id=WP_032626067.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 297628 298092 . + . ID=gene-VMS06_RS01475;Name=VMS06_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01475 NZ_JAVXZI010000001.1 Protein Homology CDS 297628 298092 . + 0 ID=cds-WP_022651793.1;Parent=gene-VMS06_RS01475;Dbxref=GenBank:WP_022651793.1;Name=WP_022651793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811844.1;locus_tag=VMS06_RS01475;product=multidrug/biocide efflux PACE transporter;protein_id=WP_022651793.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 298209 299438 . + . ID=gene-VMS06_RS01480;Name=VMS06_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01480 NZ_JAVXZI010000001.1 Protein Homology CDS 298209 299438 . + 0 ID=cds-WP_022649259.1;Parent=gene-VMS06_RS01480;Dbxref=GenBank:WP_022649259.1;Name=WP_022649259.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461939.1;locus_tag=VMS06_RS01480;product=amino acid permease;protein_id=WP_022649259.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 299472 299744 . - . ID=gene-VMS06_RS01485;Name=VMS06_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01485 NZ_JAVXZI010000001.1 Protein Homology CDS 299472 299744 . - 0 ID=cds-WP_006811846.1;Parent=gene-VMS06_RS01485;Dbxref=GenBank:WP_006811846.1;Name=WP_006811846.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228663.1;locus_tag=VMS06_RS01485;product=GNAT family N-acetyltransferase;protein_id=WP_006811846.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 299755 299985 . - . ID=gene-VMS06_RS01490;Name=yjdI;gbkey=Gene;gene=yjdI;gene_biotype=protein_coding;locus_tag=VMS06_RS01490 NZ_JAVXZI010000001.1 Protein Homology CDS 299755 299985 . - 0 ID=cds-WP_022649260.1;Parent=gene-VMS06_RS01490;Dbxref=GenBank:WP_022649260.1;Name=WP_022649260.1;gbkey=CDS;gene=yjdI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=VMS06_RS01490;product=4Fe-4S mono-cluster protein YjdI;protein_id=WP_022649260.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 300438 300626 . + . ID=gene-VMS06_RS01495;Name=VMS06_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01495 NZ_JAVXZI010000001.1 Protein Homology CDS 300438 300626 . + 0 ID=cds-WP_022649261.1;Parent=gene-VMS06_RS01495;Dbxref=GenBank:WP_022649261.1;Name=WP_022649261.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000840442.1;locus_tag=VMS06_RS01495;product=con-10 family general stress protein;protein_id=WP_022649261.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 300717 301214 . + . ID=gene-VMS06_RS01500;Name=VMS06_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01500 NZ_JAVXZI010000001.1 Protein Homology CDS 300717 301214 . + 0 ID=cds-WP_003862851.1;Parent=gene-VMS06_RS01500;Dbxref=GenBank:WP_003862851.1;Name=WP_003862851.1;Ontology_term=GO:0004322,GO:0005506,GO:0046872;gbkey=CDS;go_function=ferroxidase activity|0004322||IEA,iron ion binding|0005506||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862851.1;locus_tag=VMS06_RS01500;product=YciE/YciF ferroxidase family protein;protein_id=WP_003862851.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 301277 301783 . + . ID=gene-VMS06_RS01505;Name=VMS06_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01505 NZ_JAVXZI010000001.1 Protein Homology CDS 301277 301783 . + 0 ID=cds-WP_045308818.1;Parent=gene-VMS06_RS01505;Dbxref=GenBank:WP_045308818.1;Name=WP_045308818.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226331.1;locus_tag=VMS06_RS01505;product=ferritin-like domain-containing protein;protein_id=WP_045308818.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 301801 302673 . + . ID=gene-VMS06_RS01510;Name=VMS06_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01510 NZ_JAVXZI010000001.1 Protein Homology CDS 301801 302673 . + 0 ID=cds-WP_063843665.1;Parent=gene-VMS06_RS01510;Dbxref=GenBank:WP_063843665.1;Name=WP_063843665.1;Ontology_term=GO:0004096,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811848.1;locus_tag=VMS06_RS01510;product=manganese catalase family protein;protein_id=WP_063843665.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 302744 304147 . + . ID=gene-VMS06_RS01515;Name=VMS06_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01515 NZ_JAVXZI010000001.1 Protein Homology CDS 302744 304147 . + 0 ID=cds-WP_063147423.1;Parent=gene-VMS06_RS01515;Dbxref=GenBank:WP_063147423.1;Name=WP_063147423.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862857.1;locus_tag=VMS06_RS01515;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_063147423.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 304147 305157 . + . ID=gene-VMS06_RS01520;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=VMS06_RS01520 NZ_JAVXZI010000001.1 Protein Homology CDS 304147 305157 . + 0 ID=cds-WP_022649265.1;Parent=gene-VMS06_RS01520;Dbxref=GenBank:WP_022649265.1;Name=WP_022649265.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226334.1;locus_tag=VMS06_RS01520;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_022649265.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 305166 306791 . + . ID=gene-VMS06_RS01525;Name=VMS06_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01525 NZ_JAVXZI010000001.1 Protein Homology CDS 305166 306791 . + 0 ID=cds-WP_045622067.1;Parent=gene-VMS06_RS01525;Dbxref=GenBank:WP_045622067.1;Name=WP_045622067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145740.1;locus_tag=VMS06_RS01525;product=alpha-amylase family protein;protein_id=WP_045622067.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 306792 307778 . - . ID=gene-VMS06_RS01530;Name=VMS06_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01530 NZ_JAVXZI010000001.1 Protein Homology CDS 306792 307778 . - 0 ID=cds-WP_063147422.1;Parent=gene-VMS06_RS01530;Dbxref=GenBank:WP_063147422.1;Name=WP_063147422.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571781.1;locus_tag=VMS06_RS01530;product=SDR family oxidoreductase;protein_id=WP_063147422.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 307795 308313 . - . ID=gene-VMS06_RS01535;Name=VMS06_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01535 NZ_JAVXZI010000001.1 Protein Homology CDS 307795 308313 . - 0 ID=cds-WP_063147421.1;Parent=gene-VMS06_RS01535;Dbxref=GenBank:WP_063147421.1;Name=WP_063147421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811853.1;locus_tag=VMS06_RS01535;product=2-oxo-tetronate isomerase;protein_id=WP_063147421.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 308329 308775 . - . ID=gene-VMS06_RS01540;Name=VMS06_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01540 NZ_JAVXZI010000001.1 Protein Homology CDS 308329 308775 . - 0 ID=cds-WP_022649269.1;Parent=gene-VMS06_RS01540;Dbxref=GenBank:WP_022649269.1;Name=WP_022649269.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692720.1;locus_tag=VMS06_RS01540;product=DUF421 domain-containing protein;protein_id=WP_022649269.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 308785 309288 . - . ID=gene-VMS06_RS01545;Name=VMS06_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01545 NZ_JAVXZI010000001.1 Protein Homology CDS 308785 309288 . - 0 ID=cds-WP_063147420.1;Parent=gene-VMS06_RS01545;Dbxref=GenBank:WP_063147420.1;Name=WP_063147420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862866.1;locus_tag=VMS06_RS01545;product=hypothetical protein;protein_id=WP_063147420.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 309428 309817 . + . ID=gene-VMS06_RS01550;Name=VMS06_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01550 NZ_JAVXZI010000001.1 Protein Homology CDS 309428 309817 . + 0 ID=cds-WP_022649271.1;Parent=gene-VMS06_RS01550;Dbxref=GenBank:WP_022649271.1;Name=WP_022649271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884197.1;locus_tag=VMS06_RS01550;product=YdeI family stress tolerance OB fold protein;protein_id=WP_022649271.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 309879 310763 . + . ID=gene-VMS06_RS01555;Name=VMS06_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01555 NZ_JAVXZI010000001.1 Protein Homology CDS 309879 310763 . + 0 ID=cds-WP_022649272.1;Parent=gene-VMS06_RS01555;Dbxref=GenBank:WP_022649272.1;Name=WP_022649272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382876.1;locus_tag=VMS06_RS01555;product=SDR family oxidoreductase;protein_id=WP_022649272.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 310866 312848 . - . ID=gene-VMS06_RS01560;Name=VMS06_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01560 NZ_JAVXZI010000001.1 Protein Homology CDS 310866 312848 . - 0 ID=cds-WP_048965627.1;Parent=gene-VMS06_RS01560;Dbxref=GenBank:WP_048965627.1;Name=WP_048965627.1;Ontology_term=GO:0008484,GO:0046872,GO:0046983;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003833056.1;locus_tag=VMS06_RS01560;product=alkyl/aryl-sulfatase;protein_id=WP_048965627.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 313020 313418 . + . ID=gene-VMS06_RS01565;Name=VMS06_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01565 NZ_JAVXZI010000001.1 Protein Homology CDS 313020 313418 . + 0 ID=cds-WP_022649275.1;Parent=gene-VMS06_RS01565;Dbxref=GenBank:WP_022649275.1;Name=WP_022649275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692719.1;locus_tag=VMS06_RS01565;product=hypothetical protein;protein_id=WP_022649275.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 313477 314088 . - . ID=gene-VMS06_RS01570;Name=VMS06_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01570 NZ_JAVXZI010000001.1 Protein Homology CDS 313477 314088 . - 0 ID=cds-WP_063147419.1;Parent=gene-VMS06_RS01570;Dbxref=GenBank:WP_063147419.1;Name=WP_063147419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692718.1;locus_tag=VMS06_RS01570;product=outer membrane beta-barrel protein;protein_id=WP_063147419.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 314189 314818 . - . ID=gene-VMS06_RS01575;Name=VMS06_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01575 NZ_JAVXZI010000001.1 Protein Homology CDS 314189 314818 . - 0 ID=cds-WP_022649277.1;Parent=gene-VMS06_RS01575;Dbxref=GenBank:WP_022649277.1;Name=WP_022649277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862875.1;locus_tag=VMS06_RS01575;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_022649277.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 314882 316057 . - . ID=gene-VMS06_RS01580;Name=VMS06_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01580 NZ_JAVXZI010000001.1 Protein Homology CDS 314882 316057 . - 0 ID=cds-WP_023298534.1;Parent=gene-VMS06_RS01580;Dbxref=GenBank:WP_023298534.1;Name=WP_023298534.1;Ontology_term=GO:0055085,GO:0015267,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382880.1;locus_tag=VMS06_RS01580;product=OmpP1/FadL family transporter;protein_id=WP_023298534.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 316270 316413 . - . ID=gene-VMS06_RS01585;Name=VMS06_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01585 NZ_JAVXZI010000001.1 Protein Homology CDS 316270 316413 . - 0 ID=cds-WP_058676772.1;Parent=gene-VMS06_RS01585;Dbxref=GenBank:WP_058676772.1;Name=WP_058676772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382882.1;locus_tag=VMS06_RS01585;product=hypothetical protein;protein_id=WP_058676772.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 316600 317244 . + . ID=gene-VMS06_RS01590;Name=VMS06_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01590 NZ_JAVXZI010000001.1 Protein Homology CDS 316600 317244 . + 0 ID=cds-WP_023298536.1;Parent=gene-VMS06_RS01590;Dbxref=GenBank:WP_023298536.1;Name=WP_023298536.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236892.1;locus_tag=VMS06_RS01590;product=LysE family translocator;protein_id=WP_023298536.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 317266 317622 . - . ID=gene-VMS06_RS01595;Name=VMS06_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01595 NZ_JAVXZI010000001.1 Protein Homology CDS 317266 317622 . - 0 ID=cds-WP_063147418.1;Parent=gene-VMS06_RS01595;Dbxref=GenBank:WP_063147418.1;Name=WP_063147418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925502.1;locus_tag=VMS06_RS01595;product=putative T6SS immunity periplasmic lipoprotein;protein_id=WP_063147418.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq pseudogene 317561 317791 . - . ID=gene-VMS06_RS01600;Name=VMS06_RS01600;end_range=317791,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS01600;partial=true;pseudo=true NZ_JAVXZI010000001.1 Protein Homology CDS 317561 317791 . - 0 ID=cds-VMS06_RS01600;Parent=gene-VMS06_RS01600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=317791,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014595212.1;locus_tag=VMS06_RS01600;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JAVXZI010000001.1 RefSeq pseudogene 317806 317964 . + . ID=gene-VMS06_RS22950;Name=VMS06_RS22950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22950;partial=true;pseudo=true;start_range=.,317806 NZ_JAVXZI010000001.1 Protein Homology CDS 317806 317964 . + 0 ID=cds-VMS06_RS22950;Parent=gene-VMS06_RS22950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013356555.1;locus_tag=VMS06_RS22950;partial=true;product=DUF4225 domain-containing protein;pseudo=true;start_range=.,317806;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 317961 318275 . - . ID=gene-VMS06_RS01610;Name=VMS06_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01610 NZ_JAVXZI010000001.1 Protein Homology CDS 317961 318275 . - 0 ID=cds-WP_022649281.1;Parent=gene-VMS06_RS01610;Dbxref=GenBank:WP_022649281.1;Name=WP_022649281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882780.1;locus_tag=VMS06_RS01610;product=hypothetical protein;protein_id=WP_022649281.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 319231 319638 . - . ID=gene-VMS06_RS01615;Name=VMS06_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01615 NZ_JAVXZI010000001.1 Protein Homology CDS 319231 319638 . - 0 ID=cds-WP_058676781.1;Parent=gene-VMS06_RS01615;Dbxref=GenBank:WP_058676781.1;Name=WP_058676781.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273868.1;locus_tag=VMS06_RS01615;product=recombinase family protein;protein_id=WP_058676781.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 319888 320694 . + . ID=gene-VMS06_RS01620;Name=VMS06_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01620 NZ_JAVXZI010000001.1 Protein Homology CDS 319888 320694 . + 0 ID=cds-WP_063147417.1;Parent=gene-VMS06_RS01620;Dbxref=GenBank:WP_063147417.1;Name=WP_063147417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862880.1;locus_tag=VMS06_RS01620;product=DUF4225 domain-containing protein;protein_id=WP_063147417.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 320691 321005 . - . ID=gene-VMS06_RS01625;Name=VMS06_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01625 NZ_JAVXZI010000001.1 Protein Homology CDS 320691 321005 . - 0 ID=cds-WP_015673660.1;Parent=gene-VMS06_RS01625;Dbxref=GenBank:WP_015673660.1;Name=WP_015673660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015673660.1;locus_tag=VMS06_RS01625;product=hypothetical protein;protein_id=WP_015673660.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 321602 321675 . - . ID=gene-VMS06_RS01630;Name=VMS06_RS01630;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS01630 NZ_JAVXZI010000001.1 tRNAscan-SE tRNA 321602 321675 . - . ID=rna-VMS06_RS01630;Parent=gene-VMS06_RS01630;anticodon=(pos:complement(321641..321643));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS01630;product=tRNA-Gly NZ_JAVXZI010000001.1 tRNAscan-SE exon 321602 321675 . - . ID=exon-VMS06_RS01630-1;Parent=rna-VMS06_RS01630;anticodon=(pos:complement(321641..321643));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS01630;product=tRNA-Gly NZ_JAVXZI010000001.1 RefSeq gene 321756 322496 . - . ID=gene-VMS06_RS01635;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=VMS06_RS01635 NZ_JAVXZI010000001.1 Protein Homology CDS 321756 322496 . - 0 ID=cds-WP_063137624.1;Parent=gene-VMS06_RS01635;Dbxref=GenBank:WP_063137624.1;Name=WP_063137624.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157411.1;locus_tag=VMS06_RS01635;product=amidase activator ActS;protein_id=WP_063137624.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 322660 323202 . + . ID=gene-VMS06_RS01640;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=VMS06_RS01640 NZ_JAVXZI010000001.1 Protein Homology CDS 322660 323202 . + 0 ID=cds-WP_032676492.1;Parent=gene-VMS06_RS01640;Dbxref=GenBank:WP_032676492.1;Name=WP_032676492.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435296.1;locus_tag=VMS06_RS01640;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_032676492.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 323251 324768 . - . ID=gene-VMS06_RS01645;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=VMS06_RS01645 NZ_JAVXZI010000001.1 Protein Homology CDS 323251 324768 . - 0 ID=cds-WP_022649302.1;Parent=gene-VMS06_RS01645;Dbxref=GenBank:WP_022649302.1;Name=WP_022649302.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=VMS06_RS01645;product=lysine--tRNA ligase;protein_id=WP_022649302.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 324778 325876 . - . ID=gene-VMS06_RS01650;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=VMS06_RS01650 NZ_JAVXZI010000001.1 Protein Homology CDS 325802 325876 . - 0 ID=cds-WP_096147815.1;Parent=gene-VMS06_RS01650;Dbxref=GenBank:WP_096147815.1;Name=WP_096147815.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=VMS06_RS01650;product=peptide chain release factor 2;protein_id=WP_096147815.1;transl_table=11 NZ_JAVXZI010000001.1 Protein Homology CDS 324778 325800 . - 0 ID=cds-WP_096147815.1;Parent=gene-VMS06_RS01650;Dbxref=GenBank:WP_096147815.1;Name=WP_096147815.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=VMS06_RS01650;product=peptide chain release factor 2;protein_id=WP_096147815.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 325967 327700 . - . ID=gene-VMS06_RS01655;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=VMS06_RS01655 NZ_JAVXZI010000001.1 Protein Homology CDS 325967 327700 . - 0 ID=cds-WP_048965620.1;Parent=gene-VMS06_RS01655;Dbxref=GenBank:WP_048965620.1;Name=WP_048965620.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311791.1;locus_tag=VMS06_RS01655;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_048965620.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 327706 328419 . - . ID=gene-VMS06_RS01660;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=VMS06_RS01660 NZ_JAVXZI010000001.1 Protein Homology CDS 327706 328419 . - 0 ID=cds-WP_022649304.1;Parent=gene-VMS06_RS01660;Dbxref=GenBank:WP_022649304.1;Name=WP_022649304.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461959.1;locus_tag=VMS06_RS01660;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_022649304.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 328448 329344 . - . ID=gene-VMS06_RS01665;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=VMS06_RS01665 NZ_JAVXZI010000001.1 Protein Homology CDS 328448 329344 . - 0 ID=cds-WP_048965619.1;Parent=gene-VMS06_RS01665;Dbxref=GenBank:WP_048965619.1;Name=WP_048965619.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417370.1;locus_tag=VMS06_RS01665;product=site-specific tyrosine recombinase XerD;protein_id=WP_048965619.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 329446 329967 . + . ID=gene-VMS06_RS01670;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=VMS06_RS01670 NZ_JAVXZI010000001.1 Protein Homology CDS 329446 329967 . + 0 ID=cds-WP_015571793.1;Parent=gene-VMS06_RS01670;Dbxref=GenBank:WP_015571793.1;Name=WP_015571793.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228691.1;locus_tag=VMS06_RS01670;product=flavodoxin FldB;protein_id=WP_015571793.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 329969 330379 . - . ID=gene-VMS06_RS01675;Name=VMS06_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01675 NZ_JAVXZI010000001.1 Protein Homology CDS 329969 330379 . - 0 ID=cds-WP_063147416.1;Parent=gene-VMS06_RS01675;Dbxref=GenBank:WP_063147416.1;Name=WP_063147416.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228692.1;locus_tag=VMS06_RS01675;product=protein YgfX;protein_id=WP_063147416.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 330360 330626 . - . ID=gene-VMS06_RS01680;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=VMS06_RS01680 NZ_JAVXZI010000001.1 Protein Homology CDS 330360 330626 . - 0 ID=cds-WP_003863437.1;Parent=gene-VMS06_RS01680;Dbxref=GenBank:WP_003863437.1;Name=WP_003863437.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=VMS06_RS01680;product=FAD assembly factor SdhE;protein_id=WP_003863437.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 330921 331901 . + . ID=gene-VMS06_RS01685;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=VMS06_RS01685 NZ_JAVXZI010000001.1 Protein Homology CDS 330921 331901 . + 0 ID=cds-WP_063147415.1;Parent=gene-VMS06_RS01685;Dbxref=GenBank:WP_063147415.1;Name=WP_063147415.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417374.1;locus_tag=VMS06_RS01685;product=tRNA-modifying protein YgfZ;protein_id=WP_063147415.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 332422 333081 . - . ID=gene-VMS06_RS01690;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=VMS06_RS01690 NZ_JAVXZI010000001.1 Protein Homology CDS 332422 333081 . - 0 ID=cds-WP_022649307.1;Parent=gene-VMS06_RS01690;Dbxref=GenBank:WP_022649307.1;Name=WP_022649307.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863433.1;locus_tag=VMS06_RS01690;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_022649307.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 333348 334079 . + . ID=gene-VMS06_RS01695;Name=VMS06_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01695 NZ_JAVXZI010000001.1 Protein Homology CDS 333348 334079 . + 0 ID=cds-WP_022649308.1;Parent=gene-VMS06_RS01695;Dbxref=GenBank:WP_022649308.1;Name=WP_022649308.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571796.1;locus_tag=VMS06_RS01695;product=MurR/RpiR family transcriptional regulator;protein_id=WP_022649308.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 334196 335629 . + . ID=gene-VMS06_RS01700;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=VMS06_RS01700 NZ_JAVXZI010000001.1 Protein Homology CDS 334196 335629 . + 0 ID=cds-WP_022649309.1;Parent=gene-VMS06_RS01700;Dbxref=GenBank:WP_022649309.1;Name=WP_022649309.1;gbkey=CDS;gene=bglA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228698.1;locus_tag=VMS06_RS01700;product=6-phospho-beta-glucosidase BglA;protein_id=WP_022649309.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 335754 336113 . + . ID=gene-VMS06_RS01705;Name=VMS06_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01705 NZ_JAVXZI010000001.1 Protein Homology CDS 335754 336113 . + 0 ID=cds-WP_063147414.1;Parent=gene-VMS06_RS01705;Dbxref=GenBank:WP_063147414.1;Name=WP_063147414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228699.1;locus_tag=VMS06_RS01705;product=hypothetical protein;protein_id=WP_063147414.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 336162 338171 . + . ID=gene-VMS06_RS01710;Name=VMS06_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01710 NZ_JAVXZI010000001.1 Protein Homology CDS 336162 338171 . + 0 ID=cds-WP_063147413.1;Parent=gene-VMS06_RS01710;Dbxref=GenBank:WP_063147413.1;Name=WP_063147413.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228700.1;locus_tag=VMS06_RS01710;product=protein-disulfide reductase DsbD family protein;protein_id=WP_063147413.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 338173 338775 . + . ID=gene-VMS06_RS01715;Name=VMS06_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01715 NZ_JAVXZI010000001.1 Protein Homology CDS 338173 338775 . + 0 ID=cds-WP_045623005.1;Parent=gene-VMS06_RS01715;Dbxref=GenBank:WP_045623005.1;Name=WP_045623005.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228701.1;locus_tag=VMS06_RS01715;product=DsbA family protein;protein_id=WP_045623005.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 338765 339265 . + . ID=gene-VMS06_RS01720;Name=VMS06_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01720 NZ_JAVXZI010000001.1 Protein Homology CDS 338765 339265 . + 0 ID=cds-WP_032626112.1;Parent=gene-VMS06_RS01720;Dbxref=GenBank:WP_032626112.1;Name=WP_032626112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863422.1;locus_tag=VMS06_RS01720;product=protein disulfide oxidoreductase;protein_id=WP_032626112.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 339268 340011 . - . ID=gene-VMS06_RS01725;Name=VMS06_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01725 NZ_JAVXZI010000001.1 Protein Homology CDS 339268 340011 . - 0 ID=cds-WP_023306889.1;Parent=gene-VMS06_RS01725;Dbxref=GenBank:WP_023306889.1;Name=WP_023306889.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228703.1;locus_tag=VMS06_RS01725;product=SDR family oxidoreductase;protein_id=WP_023306889.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 340082 342955 . - . ID=gene-VMS06_RS01730;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=VMS06_RS01730 NZ_JAVXZI010000001.1 Protein Homology CDS 340082 342955 . - 0 ID=cds-WP_045308801.1;Parent=gene-VMS06_RS01730;Dbxref=GenBank:WP_045308801.1;Name=WP_045308801.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457610.1;locus_tag=VMS06_RS01730;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_045308801.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 343083 343472 . - . ID=gene-VMS06_RS01735;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=VMS06_RS01735 NZ_JAVXZI010000001.1 Protein Homology CDS 343083 343472 . - 0 ID=cds-WP_006811885.1;Parent=gene-VMS06_RS01735;Dbxref=GenBank:WP_006811885.1;Name=WP_006811885.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=VMS06_RS01735;product=glycine cleavage system protein GcvH;protein_id=WP_006811885.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 343496 344590 . - . ID=gene-VMS06_RS01740;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=VMS06_RS01740 NZ_JAVXZI010000001.1 Protein Homology CDS 343496 344590 . - 0 ID=cds-WP_023298548.1;Parent=gene-VMS06_RS01740;Dbxref=GenBank:WP_023298548.1;Name=WP_023298548.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461971.1;locus_tag=VMS06_RS01740;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_023298548.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 344988 346190 . - . ID=gene-VMS06_RS01745;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=VMS06_RS01745 NZ_JAVXZI010000001.1 Protein Homology CDS 344988 346190 . - 0 ID=cds-WP_022649317.1;Parent=gene-VMS06_RS01745;Dbxref=GenBank:WP_022649317.1;Name=WP_022649317.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461972.1;locus_tag=VMS06_RS01745;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_022649317.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 346203 347381 . - . ID=gene-VMS06_RS01750;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=VMS06_RS01750 NZ_JAVXZI010000001.1 Protein Homology CDS 346203 347381 . - 0 ID=cds-WP_063147412.1;Parent=gene-VMS06_RS01750;Dbxref=GenBank:WP_063147412.1;Name=WP_063147412.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071670.1;locus_tag=VMS06_RS01750;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_063147412.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 347378 348691 . - . ID=gene-VMS06_RS01755;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=VMS06_RS01755 NZ_JAVXZI010000001.1 Protein Homology CDS 347378 348691 . - 0 ID=cds-WP_100148849.1;Parent=gene-VMS06_RS01755;Dbxref=GenBank:WP_100148849.1;Name=WP_100148849.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571802.1;locus_tag=VMS06_RS01755;product=Xaa-Pro aminopeptidase;protein_id=WP_100148849.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 348723 349301 . - . ID=gene-VMS06_RS01760;Name=VMS06_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01760 NZ_JAVXZI010000001.1 Protein Homology CDS 348723 349301 . - 0 ID=cds-WP_003860099.1;Parent=gene-VMS06_RS01760;Dbxref=GenBank:WP_003860099.1;Name=WP_003860099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=VMS06_RS01760;product=YecA/YgfB family protein;protein_id=WP_003860099.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 349469 349798 . + . ID=gene-VMS06_RS01765;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=VMS06_RS01765 NZ_JAVXZI010000001.1 Protein Homology CDS 349469 349798 . + 0 ID=cds-WP_003860096.1;Parent=gene-VMS06_RS01765;Dbxref=GenBank:WP_003860096.1;Name=WP_003860096.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=VMS06_RS01765;product=cell division protein ZapA;protein_id=WP_003860096.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 349840 350023 . + . ID=gene-VMS06_RS01770;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=VMS06_RS01770 NZ_JAVXZI010000001.1 cmsearch ncRNA 349840 350023 . + . ID=rna-VMS06_RS01770;Parent=gene-VMS06_RS01770;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS01770;product=6S RNA NZ_JAVXZI010000001.1 cmsearch exon 349840 350023 . + . ID=exon-VMS06_RS01770-1;Parent=rna-VMS06_RS01770;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS01770;product=6S RNA NZ_JAVXZI010000001.1 RefSeq gene 350048 350644 . + . ID=gene-VMS06_RS01775;Name=VMS06_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01775 NZ_JAVXZI010000001.1 Protein Homology CDS 350048 350644 . + 0 ID=cds-WP_063147411.1;Parent=gene-VMS06_RS01775;Dbxref=GenBank:WP_063147411.1;Name=WP_063147411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860095.1;locus_tag=VMS06_RS01775;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_063147411.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 350900 352132 . - . ID=gene-VMS06_RS01780;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=VMS06_RS01780 NZ_JAVXZI010000001.1 Protein Homology CDS 350900 352132 . - 0 ID=cds-WP_022649321.1;Parent=gene-VMS06_RS01780;Dbxref=GenBank:WP_022649321.1;Name=WP_022649321.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461978.1;locus_tag=VMS06_RS01780;product=phosphoglycerate dehydrogenase;protein_id=WP_022649321.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 352398 353057 . - . ID=gene-VMS06_RS01785;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=VMS06_RS01785 NZ_JAVXZI010000001.1 Protein Homology CDS 352398 353057 . - 0 ID=cds-WP_022649322.1;Parent=gene-VMS06_RS01785;Dbxref=GenBank:WP_022649322.1;Name=WP_022649322.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228714.1;locus_tag=VMS06_RS01785;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_022649322.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 353185 354078 . + . ID=gene-VMS06_RS01790;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=VMS06_RS01790 NZ_JAVXZI010000001.1 Protein Homology CDS 353185 354078 . + 0 ID=cds-WP_003860089.1;Parent=gene-VMS06_RS01790;Dbxref=GenBank:WP_003860089.1;Name=WP_003860089.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374530.1;locus_tag=VMS06_RS01790;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_003860089.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 354121 354843 . - . ID=gene-VMS06_RS01795;Name=VMS06_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01795 NZ_JAVXZI010000001.1 Protein Homology CDS 354121 354843 . - 0 ID=cds-WP_022649323.1;Parent=gene-VMS06_RS01795;Dbxref=GenBank:WP_022649323.1;Name=WP_022649323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382904.1;locus_tag=VMS06_RS01795;product=oxidative stress defense protein;protein_id=WP_022649323.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 354936 355571 . - . ID=gene-VMS06_RS01800;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=VMS06_RS01800 NZ_JAVXZI010000001.1 Protein Homology CDS 354936 355571 . - 0 ID=cds-WP_003860085.1;Parent=gene-VMS06_RS01800;Dbxref=GenBank:WP_003860085.1;Name=WP_003860085.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960326.1;locus_tag=VMS06_RS01800;product=arginine exporter ArgO;protein_id=WP_003860085.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 355715 356569 . - . ID=gene-VMS06_RS01805;Name=VMS06_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01805 NZ_JAVXZI010000001.1 Protein Homology CDS 355715 356569 . - 0 ID=cds-WP_022649325.1;Parent=gene-VMS06_RS01805;Dbxref=GenBank:WP_022649325.1;Name=WP_022649325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811897.1;locus_tag=VMS06_RS01805;product=small-conductance mechanosensitive channel MscS;protein_id=WP_022649325.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 356758 357837 . - . ID=gene-VMS06_RS01810;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=VMS06_RS01810 NZ_JAVXZI010000001.1 Protein Homology CDS 356758 357837 . - 0 ID=cds-WP_063147410.1;Parent=gene-VMS06_RS01810;Dbxref=GenBank:WP_063147410.1;Name=WP_063147410.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=VMS06_RS01810;product=class II fructose-bisphosphate aldolase;protein_id=WP_063147410.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 357930 359093 . - . ID=gene-VMS06_RS01815;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=VMS06_RS01815 NZ_JAVXZI010000001.1 Protein Homology CDS 357930 359093 . - 0 ID=cds-WP_023298554.1;Parent=gene-VMS06_RS01815;Dbxref=GenBank:WP_023298554.1;Name=WP_023298554.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=VMS06_RS01815;product=phosphoglycerate kinase;protein_id=WP_023298554.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 359143 360162 . - . ID=gene-VMS06_RS01820;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=VMS06_RS01820 NZ_JAVXZI010000001.1 Protein Homology CDS 359143 360162 . - 0 ID=cds-WP_022649326.1;Parent=gene-VMS06_RS01820;Dbxref=GenBank:WP_022649326.1;Name=WP_022649326.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311825.1;locus_tag=VMS06_RS01820;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_022649326.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 360518 362509 . - . ID=gene-VMS06_RS01825;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=VMS06_RS01825 NZ_JAVXZI010000001.1 Protein Homology CDS 360518 362509 . - 0 ID=cds-WP_041908344.1;Parent=gene-VMS06_RS01825;Dbxref=GenBank:WP_041908344.1;Name=WP_041908344.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228723.1;locus_tag=VMS06_RS01825;product=transketolase;protein_id=WP_041908344.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 362782 363540 . + . ID=gene-VMS06_RS01830;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;locus_tag=VMS06_RS01830 NZ_JAVXZI010000001.1 Protein Homology CDS 362782 363540 . + 0 ID=cds-WP_003860073.1;Parent=gene-VMS06_RS01830;Dbxref=GenBank:WP_003860073.1;Name=WP_003860073.1;Ontology_term=GO:0004222;gbkey=CDS;gene=loiP;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311838.2;locus_tag=VMS06_RS01830;product=metalloprotease LoiP;protein_id=WP_003860073.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 363586 365226 . - . ID=gene-VMS06_RS01835;Name=VMS06_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01835 NZ_JAVXZI010000001.1 Protein Homology CDS 363586 365226 . - 0 ID=cds-WP_063147409.1;Parent=gene-VMS06_RS01835;Dbxref=GenBank:WP_063147409.1;Name=WP_063147409.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228726.1;locus_tag=VMS06_RS01835;product=thiamine pyrophosphate-binding protein;protein_id=WP_063147409.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 365240 366709 . - . ID=gene-VMS06_RS01840;Name=VMS06_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01840 NZ_JAVXZI010000001.1 Protein Homology CDS 365240 366709 . - 0 ID=cds-WP_063147408.1;Parent=gene-VMS06_RS01840;Dbxref=GenBank:WP_063147408.1;Name=WP_063147408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228727.1;locus_tag=VMS06_RS01840;product=aldehyde dehydrogenase;protein_id=WP_063147408.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 366719 367489 . - . ID=gene-VMS06_RS01845;Name=VMS06_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01845 NZ_JAVXZI010000001.1 Protein Homology CDS 366719 367489 . - 0 ID=cds-WP_323630606.1;Parent=gene-VMS06_RS01845;Dbxref=GenBank:WP_323630606.1;Name=WP_323630606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885163.1;locus_tag=VMS06_RS01845;product=aspartate dehydrogenase;protein_id=WP_323630606.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 367499 368293 . - . ID=gene-VMS06_RS01850;Name=VMS06_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01850 NZ_JAVXZI010000001.1 Protein Homology CDS 367499 368293 . - 0 ID=cds-WP_058646124.1;Parent=gene-VMS06_RS01850;Dbxref=GenBank:WP_058646124.1;Name=WP_058646124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228729.1;locus_tag=VMS06_RS01850;product=SDR family oxidoreductase;protein_id=WP_058646124.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 368277 369047 . - . ID=gene-VMS06_RS01855;Name=VMS06_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01855 NZ_JAVXZI010000001.1 Protein Homology CDS 368277 369047 . - 0 ID=cds-WP_063147407.1;Parent=gene-VMS06_RS01855;Dbxref=GenBank:WP_063147407.1;Name=WP_063147407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228730.1;locus_tag=VMS06_RS01855;product=alpha/beta fold hydrolase;protein_id=WP_063147407.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 369057 369587 . - . ID=gene-VMS06_RS01860;Name=VMS06_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01860 NZ_JAVXZI010000001.1 Protein Homology CDS 369057 369587 . - 0 ID=cds-WP_022649339.1;Parent=gene-VMS06_RS01860;Dbxref=GenBank:WP_022649339.1;Name=WP_022649339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228731.1;locus_tag=VMS06_RS01860;product=cupin domain-containing protein;protein_id=WP_022649339.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 369598 370854 . - . ID=gene-VMS06_RS01865;Name=VMS06_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01865 NZ_JAVXZI010000001.1 Protein Homology CDS 369598 370854 . - 0 ID=cds-WP_022649340.1;Parent=gene-VMS06_RS01865;Dbxref=GenBank:WP_022649340.1;Name=WP_022649340.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228732.1;locus_tag=VMS06_RS01865;product=MFS transporter;protein_id=WP_022649340.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 370880 372067 . - . ID=gene-VMS06_RS01870;Name=VMS06_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01870 NZ_JAVXZI010000001.1 Protein Homology CDS 370880 372067 . - 0 ID=cds-WP_063147406.1;Parent=gene-VMS06_RS01870;Dbxref=GenBank:WP_063147406.1;Name=WP_063147406.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228733.1;locus_tag=VMS06_RS01870;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_063147406.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 372064 372990 . - . ID=gene-VMS06_RS01875;Name=VMS06_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01875 NZ_JAVXZI010000001.1 Protein Homology CDS 372064 372990 . - 0 ID=cds-WP_038416706.1;Parent=gene-VMS06_RS01875;Dbxref=GenBank:WP_038416706.1;Name=WP_038416706.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228734.1;locus_tag=VMS06_RS01875;product=VOC family protein;protein_id=WP_038416706.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 373069 373857 . - . ID=gene-VMS06_RS01880;Name=VMS06_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01880 NZ_JAVXZI010000001.1 Protein Homology CDS 373069 373857 . - 0 ID=cds-WP_032671673.1;Parent=gene-VMS06_RS01880;Dbxref=GenBank:WP_032671673.1;Name=WP_032671673.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228735.1;locus_tag=VMS06_RS01880;product=IclR family transcriptional regulator;protein_id=WP_032671673.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 373870 374619 . - . ID=gene-VMS06_RS01885;Name=VMS06_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01885 NZ_JAVXZI010000001.1 Protein Homology CDS 373870 374619 . - 0 ID=cds-WP_063147405.1;Parent=gene-VMS06_RS01885;Dbxref=GenBank:WP_063147405.1;Name=WP_063147405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228736.1;locus_tag=VMS06_RS01885;product=SDR family oxidoreductase;protein_id=WP_063147405.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 374619 375641 . - . ID=gene-VMS06_RS01890;Name=VMS06_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01890 NZ_JAVXZI010000001.1 Protein Homology CDS 374619 375641 . - 0 ID=cds-WP_017692695.1;Parent=gene-VMS06_RS01890;Dbxref=GenBank:WP_017692695.1;Name=WP_017692695.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228737.1;locus_tag=VMS06_RS01890;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_017692695.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 375652 375960 . - . ID=gene-VMS06_RS01895;Name=VMS06_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01895 NZ_JAVXZI010000001.1 Protein Homology CDS 375652 375960 . - 0 ID=cds-WP_022649346.1;Parent=gene-VMS06_RS01895;Dbxref=GenBank:WP_022649346.1;Name=WP_022649346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228738.1;locus_tag=VMS06_RS01895;product=recombinase-like helix-turn-helix domain-containing protein;protein_id=WP_022649346.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 375957 376280 . - . ID=gene-VMS06_RS01900;Name=VMS06_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01900 NZ_JAVXZI010000001.1 Protein Homology CDS 375957 376280 . - 0 ID=cds-WP_003860044.1;Parent=gene-VMS06_RS01900;Dbxref=GenBank:WP_003860044.1;Name=WP_003860044.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228739.1;locus_tag=VMS06_RS01900;product=Rieske (2Fe-2S) protein;protein_id=WP_003860044.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq pseudogene 376696 377028 . + . ID=gene-VMS06_RS01905;Name=VMS06_RS01905;end_range=377028,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS01905;partial=true;pseudo=true NZ_JAVXZI010000001.1 Protein Homology CDS 376696 377028 . + 0 ID=cds-VMS06_RS01905;Parent=gene-VMS06_RS01905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=377028,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228740.1;locus_tag=VMS06_RS01905;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 377105 378025 . - . ID=gene-VMS06_RS01910;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=VMS06_RS01910 NZ_JAVXZI010000001.1 Protein Homology CDS 377105 378025 . - 0 ID=cds-WP_017382921.1;Parent=gene-VMS06_RS01910;Dbxref=GenBank:WP_017382921.1;Name=WP_017382921.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499737.1;locus_tag=VMS06_RS01910;product=agmatinase;protein_id=WP_017382921.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 378235 380211 . - . ID=gene-VMS06_RS01915;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=VMS06_RS01915 NZ_JAVXZI010000001.1 Protein Homology CDS 378235 380211 . - 0 ID=cds-WP_022649348.1;Parent=gene-VMS06_RS01915;Dbxref=GenBank:WP_022649348.1;Name=WP_022649348.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462002.1;locus_tag=VMS06_RS01915;product=biosynthetic arginine decarboxylase;protein_id=WP_022649348.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 380220 380351 . - . ID=gene-VMS06_RS01920;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=VMS06_RS01920 NZ_JAVXZI010000001.1 Protein Homology CDS 380220 380351 . - 0 ID=cds-WP_057979949.1;Parent=gene-VMS06_RS01920;Dbxref=GenBank:WP_057979949.1;Name=WP_057979949.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729109.1;locus_tag=VMS06_RS01920;product=acid stress response protein YqgB;protein_id=WP_057979949.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 380446 380586 . - . ID=gene-VMS06_RS22850;Name=VMS06_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22850 NZ_JAVXZI010000001.1 Protein Homology CDS 380446 380586 . - 0 ID=cds-WP_418251239.1;Parent=gene-VMS06_RS22850;Dbxref=GenBank:WP_418251239.1;Name=WP_418251239.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048138.2;locus_tag=VMS06_RS22850;product=hypothetical protein;protein_id=WP_418251239.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 381012 382166 . + . ID=gene-VMS06_RS01925;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=VMS06_RS01925 NZ_JAVXZI010000001.1 Protein Homology CDS 381012 382166 . + 0 ID=cds-WP_003860037.1;Parent=gene-VMS06_RS01925;Dbxref=GenBank:WP_003860037.1;Name=WP_003860037.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=VMS06_RS01925;product=methionine adenosyltransferase;protein_id=WP_003860037.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 382583 383980 . + . ID=gene-VMS06_RS01930;Name=galP;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=VMS06_RS01930 NZ_JAVXZI010000001.1 Protein Homology CDS 382583 383980 . + 0 ID=cds-WP_023306911.1;Parent=gene-VMS06_RS01930;Dbxref=GenBank:WP_023306911.1;Name=WP_023306911.1;gbkey=CDS;gene=galP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462007.1;locus_tag=VMS06_RS01930;product=galactose/proton symporter;protein_id=WP_023306911.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 384040 384537 . + . ID=gene-VMS06_RS01935;Name=VMS06_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01935 NZ_JAVXZI010000001.1 Protein Homology CDS 384040 384537 . + 0 ID=cds-WP_032621896.1;Parent=gene-VMS06_RS01935;Dbxref=GenBank:WP_032621896.1;Name=WP_032621896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417419.1;locus_tag=VMS06_RS01935;product=SprT family zinc-dependent metalloprotease;protein_id=WP_032621896.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 384632 385339 . + . ID=gene-VMS06_RS01940;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=VMS06_RS01940 NZ_JAVXZI010000001.1 Protein Homology CDS 384632 385339 . + 0 ID=cds-WP_023306912.1;Parent=gene-VMS06_RS01940;Dbxref=GenBank:WP_023306912.1;Name=WP_023306912.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883698.1;locus_tag=VMS06_RS01940;product=deoxyribonuclease I;protein_id=WP_023306912.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 385391 386122 . + . ID=gene-VMS06_RS01945;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=VMS06_RS01945 NZ_JAVXZI010000001.1 Protein Homology CDS 385391 386122 . + 0 ID=cds-WP_003860033.1;Parent=gene-VMS06_RS01945;Dbxref=GenBank:WP_003860033.1;Name=WP_003860033.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=VMS06_RS01945;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_003860033.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 386154 387101 . + . ID=gene-VMS06_RS01950;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=VMS06_RS01950 NZ_JAVXZI010000001.1 Protein Homology CDS 386154 387101 . + 0 ID=cds-WP_003860032.1;Parent=gene-VMS06_RS01950;Dbxref=GenBank:WP_003860032.1;Name=WP_003860032.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462011.1;locus_tag=VMS06_RS01950;product=glutathione synthase;protein_id=WP_003860032.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 387176 387736 . + . ID=gene-VMS06_RS01955;Name=VMS06_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01955 NZ_JAVXZI010000001.1 Protein Homology CDS 387176 387736 . + 0 ID=cds-WP_022649353.1;Parent=gene-VMS06_RS01955;Dbxref=GenBank:WP_022649353.1;Name=WP_022649353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228750.1;locus_tag=VMS06_RS01955;product=YqgE/AlgH family protein;protein_id=WP_022649353.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 387736 388152 . + . ID=gene-VMS06_RS01960;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=VMS06_RS01960 NZ_JAVXZI010000001.1 Protein Homology CDS 387736 388152 . + 0 ID=cds-WP_006811925.1;Parent=gene-VMS06_RS01960;Dbxref=GenBank:WP_006811925.1;Name=WP_006811925.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708714.1;locus_tag=VMS06_RS01960;product=Holliday junction resolvase RuvX;protein_id=WP_006811925.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 388163 389143 . - . ID=gene-VMS06_RS01965;Name=VMS06_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01965 NZ_JAVXZI010000001.1 Protein Homology CDS 388163 389143 . - 0 ID=cds-WP_032676501.1;Parent=gene-VMS06_RS01965;Dbxref=GenBank:WP_032676501.1;Name=WP_032676501.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692691.1;locus_tag=VMS06_RS01965;product=type IV pilus twitching motility protein PilT;protein_id=WP_032676501.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 389161 389862 . + . ID=gene-VMS06_RS01970;Name=VMS06_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01970 NZ_JAVXZI010000001.1 Protein Homology CDS 389161 389862 . + 0 ID=cds-WP_023298569.1;Parent=gene-VMS06_RS01970;Dbxref=GenBank:WP_023298569.1;Name=WP_023298569.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178448.1;locus_tag=VMS06_RS01970;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_023298569.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 389884 390450 . + . ID=gene-VMS06_RS01975;Name=VMS06_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01975 NZ_JAVXZI010000001.1 Protein Homology CDS 389884 390450 . + 0 ID=cds-WP_003860024.1;Parent=gene-VMS06_RS01975;Dbxref=GenBank:WP_003860024.1;Name=WP_003860024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=VMS06_RS01975;product=YggT family protein;protein_id=WP_003860024.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 390447 390743 . + . ID=gene-VMS06_RS01980;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=VMS06_RS01980 NZ_JAVXZI010000001.1 Protein Homology CDS 390447 390743 . + 0 ID=cds-WP_022649356.1;Parent=gene-VMS06_RS01980;Dbxref=GenBank:WP_022649356.1;Name=WP_022649356.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499758.1;locus_tag=VMS06_RS01980;product=DUF167 family protein YggU;protein_id=WP_022649356.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 390747 391340 . + . ID=gene-VMS06_RS01985;Name=VMS06_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01985 NZ_JAVXZI010000001.1 Protein Homology CDS 390747 391340 . + 0 ID=cds-WP_022649357.1;Parent=gene-VMS06_RS01985;Dbxref=GenBank:WP_022649357.1;Name=WP_022649357.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228758.1;locus_tag=VMS06_RS01985;product=XTP/dITP diphosphatase;protein_id=WP_022649357.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 391333 392481 . + . ID=gene-VMS06_RS01990;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=VMS06_RS01990 NZ_JAVXZI010000001.1 Protein Homology CDS 391333 392481 . + 0 ID=cds-WP_038416710.1;Parent=gene-VMS06_RS01990;Dbxref=GenBank:WP_038416710.1;Name=WP_038416710.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860019.1;locus_tag=VMS06_RS01990;product=radical SAM family heme chaperone HemW;protein_id=WP_038416710.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 392538 392876 . + . ID=gene-VMS06_RS01995;Name=VMS06_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS01995 NZ_JAVXZI010000001.1 Protein Homology CDS 392538 392876 . + 0 ID=cds-WP_023298571.1;Parent=gene-VMS06_RS01995;Dbxref=GenBank:WP_023298571.1;Name=WP_023298571.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382927.1;locus_tag=VMS06_RS01995;product=endonuclease domain-containing protein;protein_id=WP_023298571.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 392960 393676 . - . ID=gene-VMS06_RS02000;Name=VMS06_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02000 NZ_JAVXZI010000001.1 Protein Homology CDS 392960 393676 . - 0 ID=cds-WP_022649360.1;Parent=gene-VMS06_RS02000;Dbxref=GenBank:WP_022649360.1;Name=WP_022649360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098671.1;locus_tag=VMS06_RS02000;product=YggN family protein;protein_id=WP_022649360.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 393734 394060 . - . ID=gene-VMS06_RS02005;Name=VMS06_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02005 NZ_JAVXZI010000001.1 Protein Homology CDS 393734 394060 . - 0 ID=cds-WP_003862421.1;Parent=gene-VMS06_RS02005;Dbxref=GenBank:WP_003862421.1;Name=WP_003862421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417434.4;locus_tag=VMS06_RS02005;product=YggL family protein;protein_id=WP_003862421.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 394060 394779 . - . ID=gene-VMS06_RS02010;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=VMS06_RS02010 NZ_JAVXZI010000001.1 Protein Homology CDS 394060 394779 . - 0 ID=cds-WP_015571843.1;Parent=gene-VMS06_RS02010;Dbxref=GenBank:WP_015571843.1;Name=WP_015571843.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=VMS06_RS02010;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_015571843.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 394924 395976 . + . ID=gene-VMS06_RS02015;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=VMS06_RS02015 NZ_JAVXZI010000001.1 Protein Homology CDS 394924 395976 . + 0 ID=cds-WP_023306917.1;Parent=gene-VMS06_RS02015;Dbxref=GenBank:WP_023306917.1;Name=WP_023306917.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417436.1;locus_tag=VMS06_RS02015;product=A/G-specific adenine glycosylase;protein_id=WP_023306917.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 396003 396275 . + . ID=gene-VMS06_RS02020;Name=VMS06_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02020 NZ_JAVXZI010000001.1 Protein Homology CDS 396003 396275 . + 0 ID=cds-WP_003862425.1;Parent=gene-VMS06_RS02020;Dbxref=GenBank:WP_003862425.1;Name=WP_003862425.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435490.1;locus_tag=VMS06_RS02020;product=oxidative damage protection protein;protein_id=WP_003862425.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 396400 397476 . + . ID=gene-VMS06_RS02025;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=VMS06_RS02025 NZ_JAVXZI010000001.1 Protein Homology CDS 396400 397476 . + 0 ID=cds-WP_032621902.1;Parent=gene-VMS06_RS02025;Dbxref=GenBank:WP_032621902.1;Name=WP_032621902.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417438.2;locus_tag=VMS06_RS02025;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_032621902.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 397769 399025 . + . ID=gene-VMS06_RS02030;Name=VMS06_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02030 NZ_JAVXZI010000001.1 Protein Homology CDS 397769 399025 . + 0 ID=cds-WP_022649364.1;Parent=gene-VMS06_RS02030;Dbxref=GenBank:WP_022649364.1;Name=WP_022649364.1;Ontology_term=GO:0015858,GO:0055085,GO:0015506,GO:0022857;gbkey=CDS;go_function=nucleoside:proton symporter activity|0015506||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleoside transport|0015858||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462029.1;locus_tag=VMS06_RS02030;product=nucleoside permease;protein_id=WP_022649364.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 399107 399910 . - . ID=gene-VMS06_RS02035;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=VMS06_RS02035 NZ_JAVXZI010000001.1 Protein Homology CDS 399107 399910 . - 0 ID=cds-WP_063147404.1;Parent=gene-VMS06_RS02035;Dbxref=GenBank:WP_063147404.1;Name=WP_063147404.1;Ontology_term=GO:0016310,GO:0019361,GO:0005524,GO:0046917;gbkey=CDS;gene=citG;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA,2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382931.1;locus_tag=VMS06_RS02035;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_063147404.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 399888 400427 . - . ID=gene-VMS06_RS02040;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=VMS06_RS02040 NZ_JAVXZI010000001.1 Protein Homology CDS 399888 400427 . - 0 ID=cds-WP_023298574.1;Parent=gene-VMS06_RS02040;Dbxref=GenBank:WP_023298574.1;Name=WP_023298574.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692686.1;locus_tag=VMS06_RS02040;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_023298574.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 400430 401947 . - . ID=gene-VMS06_RS02045;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=VMS06_RS02045 NZ_JAVXZI010000001.1 Protein Homology CDS 400430 401947 . - 0 ID=cds-WP_045308348.1;Parent=gene-VMS06_RS02045;Dbxref=GenBank:WP_045308348.1;Name=WP_045308348.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178465.1;locus_tag=VMS06_RS02045;product=citrate lyase subunit alpha;protein_id=WP_045308348.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 401958 402833 . - . ID=gene-VMS06_RS02050;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=VMS06_RS02050 NZ_JAVXZI010000001.1 Protein Homology CDS 401958 402833 . - 0 ID=cds-WP_032626185.1;Parent=gene-VMS06_RS02050;Dbxref=GenBank:WP_032626185.1;Name=WP_032626185.1;Ontology_term=GO:0006084,GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citE;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862436.1;locus_tag=VMS06_RS02050;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_032626185.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 402830 403123 . - . ID=gene-VMS06_RS02055;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=VMS06_RS02055 NZ_JAVXZI010000001.1 Protein Homology CDS 402830 403123 . - 0 ID=cds-WP_017382935.1;Parent=gene-VMS06_RS02055;Dbxref=GenBank:WP_017382935.1;Name=WP_017382935.1;Ontology_term=GO:0006113,GO:0008815,GO:0005737,GO:0009346;gbkey=CDS;gene=citD;go_component=cytoplasm|0005737||IEA,ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883681.1;locus_tag=VMS06_RS02055;product=citrate lyase acyl carrier protein;protein_id=WP_017382935.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 403140 404162 . - . ID=gene-VMS06_RS02060;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=VMS06_RS02060 NZ_JAVXZI010000001.1 Protein Homology CDS 403140 404162 . - 0 ID=cds-WP_063147403.1;Parent=gene-VMS06_RS02060;Dbxref=GenBank:WP_063147403.1;Name=WP_063147403.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862441.1;locus_tag=VMS06_RS02060;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_063147403.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 404176 405039 . - . ID=gene-VMS06_RS02065;Name=VMS06_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02065 NZ_JAVXZI010000001.1 Protein Homology CDS 404176 405039 . - 0 ID=cds-WP_015571851.1;Parent=gene-VMS06_RS02065;Dbxref=GenBank:WP_015571851.1;Name=WP_015571851.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171588.1;locus_tag=VMS06_RS02065;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_015571851.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 405057 406418 . - . ID=gene-VMS06_RS02070;Name=VMS06_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02070 NZ_JAVXZI010000001.1 Protein Homology CDS 405057 406418 . - 0 ID=cds-WP_022649371.1;Parent=gene-VMS06_RS02070;Dbxref=GenBank:WP_022649371.1;Name=WP_022649371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499777.1;locus_tag=VMS06_RS02070;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_022649371.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 406764 408401 . + . ID=gene-VMS06_RS02075;Name=VMS06_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02075 NZ_JAVXZI010000001.1 Protein Homology CDS 406764 408401 . + 0 ID=cds-WP_022649372.1;Parent=gene-VMS06_RS02075;Dbxref=GenBank:WP_022649372.1;Name=WP_022649372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960368.1;locus_tag=VMS06_RS02075;product=ATP-binding protein;protein_id=WP_022649372.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 408391 409083 . + . ID=gene-VMS06_RS02080;Name=VMS06_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02080 NZ_JAVXZI010000001.1 Protein Homology CDS 408391 409083 . + 0 ID=cds-WP_022649373.1;Parent=gene-VMS06_RS02080;Dbxref=GenBank:WP_022649373.1;Name=WP_022649373.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862448.1;locus_tag=VMS06_RS02080;product=response regulator;protein_id=WP_022649373.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 409182 411317 . - . ID=gene-VMS06_RS02085;Name=VMS06_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02085 NZ_JAVXZI010000001.1 Protein Homology CDS 409182 411317 . - 0 ID=cds-WP_023298579.1;Parent=gene-VMS06_RS02085;Dbxref=GenBank:WP_023298579.1;Name=WP_023298579.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417440.4;locus_tag=VMS06_RS02085;product=ornithine decarboxylase;protein_id=WP_023298579.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 411499 412212 . + . ID=gene-VMS06_RS02090;Name=VMS06_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02090 NZ_JAVXZI010000001.1 Protein Homology CDS 411499 412212 . + 0 ID=cds-WP_003862452.1;Parent=gene-VMS06_RS02090;Dbxref=GenBank:WP_003862452.1;Name=WP_003862452.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499781.1;locus_tag=VMS06_RS02090;product=DUF554 domain-containing protein;protein_id=WP_003862452.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 412308 412383 . + . ID=gene-VMS06_RS02095;Name=VMS06_RS02095;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS02095 NZ_JAVXZI010000001.1 tRNAscan-SE tRNA 412308 412383 . + . ID=rna-VMS06_RS02095;Parent=gene-VMS06_RS02095;anticodon=(pos:412341..412343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02095;product=tRNA-Phe NZ_JAVXZI010000001.1 tRNAscan-SE exon 412308 412383 . + . ID=exon-VMS06_RS02095-1;Parent=rna-VMS06_RS02095;anticodon=(pos:412341..412343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02095;product=tRNA-Phe NZ_JAVXZI010000001.1 RefSeq pseudogene 412905 413723 . + . ID=gene-VMS06_RS02100;Name=VMS06_RS02100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS02100;pseudo=true NZ_JAVXZI010000001.1 Protein Homology CDS 412905 413723 . + 0 ID=cds-VMS06_RS02100;Parent=gene-VMS06_RS02100;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833243.1;locus_tag=VMS06_RS02100;product=DUF4225 domain-containing protein;pseudo=true;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 413701 414027 . - . ID=gene-VMS06_RS02105;Name=VMS06_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02105 NZ_JAVXZI010000001.1 Protein Homology CDS 413701 414027 . - 0 ID=cds-WP_023298582.1;Parent=gene-VMS06_RS02105;Dbxref=GenBank:WP_023298582.1;Name=WP_023298582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833244.1;locus_tag=VMS06_RS02105;product=hypothetical protein;protein_id=WP_023298582.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 414429 416216 . - . ID=gene-VMS06_RS02110;Name=VMS06_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02110 NZ_JAVXZI010000001.1 Protein Homology CDS 414429 416216 . - 0 ID=cds-WP_063147401.1;Parent=gene-VMS06_RS02110;Dbxref=GenBank:WP_063147401.1;Name=WP_063147401.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098692.1;locus_tag=VMS06_RS02110;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_063147401.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 416213 416845 . - . ID=gene-VMS06_RS02115;Name=VMS06_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02115 NZ_JAVXZI010000001.1 Protein Homology CDS 416213 416845 . - 0 ID=cds-WP_003862456.1;Parent=gene-VMS06_RS02115;Dbxref=GenBank:WP_003862456.1;Name=WP_003862456.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692678.1;locus_tag=VMS06_RS02115;product=response regulator transcription factor;protein_id=WP_003862456.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 417021 417335 . + . ID=gene-VMS06_RS02120;Name=VMS06_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02120 NZ_JAVXZI010000001.1 Protein Homology CDS 417021 417335 . + 0 ID=cds-WP_003862457.1;Parent=gene-VMS06_RS02120;Dbxref=GenBank:WP_003862457.1;Name=WP_003862457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435531.1;locus_tag=VMS06_RS02120;product=lipoprotein;protein_id=WP_003862457.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 417450 420497 . + . ID=gene-VMS06_RS02125;Name=VMS06_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02125 NZ_JAVXZI010000001.1 Protein Homology CDS 417450 420497 . + 0 ID=cds-WP_063843662.1;Parent=gene-VMS06_RS02125;Dbxref=GenBank:WP_063843662.1;Name=WP_063843662.1;Ontology_term=GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169013.1;locus_tag=VMS06_RS02125;product=autotransporter family protein;protein_id=WP_063843662.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 420559 421086 . - . ID=gene-VMS06_RS02130;Name=VMS06_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02130 NZ_JAVXZI010000001.1 Protein Homology CDS 420559 421086 . - 0 ID=cds-WP_045308383.1;Parent=gene-VMS06_RS02130;Dbxref=GenBank:WP_045308383.1;Name=WP_045308383.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862459.1;locus_tag=VMS06_RS02130;product=helix-turn-helix transcriptional regulator;protein_id=WP_045308383.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 421755 424193 . + . ID=gene-VMS06_RS02135;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=VMS06_RS02135 NZ_JAVXZI010000001.1 Protein Homology CDS 421755 424193 . + 0 ID=cds-WP_063147399.1;Parent=gene-VMS06_RS02135;Dbxref=GenBank:WP_063147399.1;Name=WP_063147399.1;Ontology_term=GO:1901515;gbkey=CDS;gene=pgaA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885219.1;locus_tag=VMS06_RS02135;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_063147399.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 424202 426139 . + . ID=gene-VMS06_RS02140;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=VMS06_RS02140 NZ_JAVXZI010000001.1 Protein Homology CDS 424202 426139 . + 0 ID=cds-WP_063147398.1;Parent=gene-VMS06_RS02140;Dbxref=GenBank:WP_063147398.1;Name=WP_063147398.1;Ontology_term=GO:0000271,GO:0019213;gbkey=CDS;gene=pgaB;go_function=deacetylase activity|0019213||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692673.1;locus_tag=VMS06_RS02140;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_063147398.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 426132 427463 . + . ID=gene-VMS06_RS02145;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=VMS06_RS02145 NZ_JAVXZI010000001.1 Protein Homology CDS 426132 427463 . + 0 ID=cds-WP_063147397.1;Parent=gene-VMS06_RS02145;Dbxref=GenBank:WP_063147397.1;Name=WP_063147397.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883671.1;locus_tag=VMS06_RS02145;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_063147397.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 427460 427894 . + . ID=gene-VMS06_RS02150;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=VMS06_RS02150 NZ_JAVXZI010000001.1 Protein Homology CDS 427460 427894 . + 0 ID=cds-WP_063147396.1;Parent=gene-VMS06_RS02150;Dbxref=GenBank:WP_063147396.1;Name=WP_063147396.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435545.1;locus_tag=VMS06_RS02150;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_063147396.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 427947 429809 . - . ID=gene-VMS06_RS02155;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=VMS06_RS02155 NZ_JAVXZI010000001.1 Protein Homology CDS 427947 429809 . - 0 ID=cds-WP_045623048.1;Parent=gene-VMS06_RS02155;Dbxref=GenBank:WP_045623048.1;Name=WP_045623048.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862464.1;locus_tag=VMS06_RS02155;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_045623048.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 429993 430859 . + . ID=gene-VMS06_RS02160;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=VMS06_RS02160 NZ_JAVXZI010000001.1 Protein Homology CDS 429993 430859 . + 0 ID=cds-WP_023306934.1;Parent=gene-VMS06_RS02160;Dbxref=GenBank:WP_023306934.1;Name=WP_023306934.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154488.1;locus_tag=VMS06_RS02160;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_023306934.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 430936 431685 . + . ID=gene-VMS06_RS02165;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=VMS06_RS02165 NZ_JAVXZI010000001.1 Protein Homology CDS 430936 431685 . + 0 ID=cds-WP_023298593.1;Parent=gene-VMS06_RS02165;Dbxref=GenBank:WP_023298593.1;Name=WP_023298593.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862467.1;locus_tag=VMS06_RS02165;product=L-fucose operon activator;protein_id=WP_023298593.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq pseudogene 431688 433235 . - . ID=gene-VMS06_RS02170;Name=VMS06_RS02170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS02170;pseudo=true NZ_JAVXZI010000001.1 Protein Homology CDS 431688 433235 . - 0 ID=cds-VMS06_RS02170;Parent=gene-VMS06_RS02170;Note=internal stop;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811954.1;locus_tag=VMS06_RS02170;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 433349 434236 . - . ID=gene-VMS06_RS02175;Name=yghX;gbkey=Gene;gene=yghX;gene_biotype=protein_coding;locus_tag=VMS06_RS02175 NZ_JAVXZI010000001.1 Protein Homology CDS 433349 434236 . - 0 ID=cds-WP_063147394.1;Parent=gene-VMS06_RS02175;Dbxref=GenBank:WP_063147394.1;Name=WP_063147394.1;gbkey=CDS;gene=yghX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311911.3;locus_tag=VMS06_RS02175;product=YghX family hydrolase;protein_id=WP_063147394.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 434319 435359 . + . ID=gene-VMS06_RS02180;Name=VMS06_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02180 NZ_JAVXZI010000001.1 Protein Homology CDS 434319 435359 . + 0 ID=cds-WP_063147393.1;Parent=gene-VMS06_RS02180;Dbxref=GenBank:WP_063147393.1;Name=WP_063147393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862471.1;locus_tag=VMS06_RS02180;product=aldo/keto reductase;protein_id=WP_063147393.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 435473 435961 . - . ID=gene-VMS06_RS02185;Name=VMS06_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02185 NZ_JAVXZI010000001.1 Protein Homology CDS 435473 435961 . - 0 ID=cds-WP_006811956.1;Parent=gene-VMS06_RS02185;Dbxref=GenBank:WP_006811956.1;Name=WP_006811956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811956.1;locus_tag=VMS06_RS02185;product=TIGR00645 family protein;protein_id=WP_006811956.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 436005 436508 . - . ID=gene-VMS06_RS02190;Name=VMS06_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02190 NZ_JAVXZI010000001.1 Protein Homology CDS 436005 436508 . - 0 ID=cds-WP_023298598.1;Parent=gene-VMS06_RS02190;Dbxref=GenBank:WP_023298598.1;Name=WP_023298598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441059.1;locus_tag=VMS06_RS02190;product=ESA_00282 family adhesion-associated protein;protein_id=WP_023298598.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 436611 437015 . + . ID=gene-VMS06_RS02195;Name=VMS06_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02195 NZ_JAVXZI010000001.1 Protein Homology CDS 436611 437015 . + 0 ID=cds-WP_023298599.1;Parent=gene-VMS06_RS02195;Dbxref=GenBank:WP_023298599.1;Name=WP_023298599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000936337.1;locus_tag=VMS06_RS02195;product=hypothetical protein;protein_id=WP_023298599.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 437008 437445 . + . ID=gene-VMS06_RS02200;Name=VMS06_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02200 NZ_JAVXZI010000001.1 Protein Homology CDS 437008 437445 . + 0 ID=cds-WP_023298600.1;Parent=gene-VMS06_RS02200;Dbxref=GenBank:WP_023298600.1;Name=WP_023298600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071753.1;locus_tag=VMS06_RS02200;product=hypothetical protein;protein_id=WP_023298600.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 437537 437962 . - . ID=gene-VMS06_RS02205;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=VMS06_RS02205 NZ_JAVXZI010000001.1 Protein Homology CDS 437537 437962 . - 0 ID=cds-WP_063147392.1;Parent=gene-VMS06_RS02205;Dbxref=GenBank:WP_063147392.1;Name=WP_063147392.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228852.1;locus_tag=VMS06_RS02205;product=TonB system transport protein ExbD;protein_id=WP_063147392.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 437967 438698 . - . ID=gene-VMS06_RS02210;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=VMS06_RS02210 NZ_JAVXZI010000001.1 Protein Homology CDS 437967 438698 . - 0 ID=cds-WP_023298602.1;Parent=gene-VMS06_RS02210;Dbxref=GenBank:WP_023298602.1;Name=WP_023298602.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228853.1;locus_tag=VMS06_RS02210;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_023298602.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 438950 440137 . + . ID=gene-VMS06_RS02215;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=VMS06_RS02215 NZ_JAVXZI010000001.1 Protein Homology CDS 438950 440137 . + 0 ID=cds-WP_023306940.1;Parent=gene-VMS06_RS02215;Dbxref=GenBank:WP_023306940.1;Name=WP_023306940.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228855.1;locus_tag=VMS06_RS02215;product=cystathionine beta-lyase;protein_id=WP_023306940.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 440280 440939 . + . ID=gene-VMS06_RS02220;Name=yghB;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=VMS06_RS02220 NZ_JAVXZI010000001.1 Protein Homology CDS 440280 440939 . + 0 ID=cds-WP_015571869.1;Parent=gene-VMS06_RS02220;Dbxref=GenBank:WP_015571869.1;Name=WP_015571869.1;gbkey=CDS;gene=yghB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228856.1;locus_tag=VMS06_RS02220;product=DedA family general envelope maintenance protein YghB;protein_id=WP_015571869.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 440985 441884 . - . ID=gene-VMS06_RS02225;Name=VMS06_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02225 NZ_JAVXZI010000001.1 Protein Homology CDS 440985 441884 . - 0 ID=cds-WP_063147391.1;Parent=gene-VMS06_RS02225;Dbxref=GenBank:WP_063147391.1;Name=WP_063147391.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382749.1;locus_tag=VMS06_RS02225;product=AraC family transcriptional regulator;protein_id=WP_063147391.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 442080 443243 . + . ID=gene-VMS06_RS02230;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=VMS06_RS02230 NZ_JAVXZI010000001.1 Protein Homology CDS 442080 443243 . + 0 ID=cds-WP_023330190.1;Parent=gene-VMS06_RS02230;Dbxref=GenBank:WP_023330190.1;Name=WP_023330190.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase (NAD+) activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228858.1;locus_tag=VMS06_RS02230;product=alcohol dehydrogenase;protein_id=WP_023330190.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 443349 444176 . + . ID=gene-VMS06_RS02235;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=VMS06_RS02235 NZ_JAVXZI010000001.1 Protein Homology CDS 443349 444176 . + 0 ID=cds-WP_023306942.1;Parent=gene-VMS06_RS02235;Dbxref=GenBank:WP_023306942.1;Name=WP_023306942.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462080.1;locus_tag=VMS06_RS02235;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_023306942.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 444264 446438 . - . ID=gene-VMS06_RS02240;Name=VMS06_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02240 NZ_JAVXZI010000001.1 Protein Homology CDS 444264 446438 . - 0 ID=cds-WP_063948398.1;Parent=gene-VMS06_RS02240;Dbxref=GenBank:WP_063948398.1;Name=WP_063948398.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818280.1;locus_tag=VMS06_RS02240;product=YgiQ family radical SAM protein;protein_id=WP_063948398.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 446590 448002 . - . ID=gene-VMS06_RS02245;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=VMS06_RS02245 NZ_JAVXZI010000001.1 Protein Homology CDS 446590 448002 . - 0 ID=cds-WP_063147390.1;Parent=gene-VMS06_RS02245;Dbxref=GenBank:WP_063147390.1;Name=WP_063147390.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311928.1;locus_tag=VMS06_RS02245;product=cell division protein FtsP;protein_id=WP_063147390.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 448064 448801 . - . ID=gene-VMS06_RS02250;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=VMS06_RS02250 NZ_JAVXZI010000001.1 Protein Homology CDS 448064 448801 . - 0 ID=cds-WP_022649406.1;Parent=gene-VMS06_RS02250;Dbxref=GenBank:WP_022649406.1;Name=WP_022649406.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311929.1;locus_tag=VMS06_RS02250;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_022649406.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 448964 451222 . - . ID=gene-VMS06_RS02255;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=VMS06_RS02255 NZ_JAVXZI010000001.1 Protein Homology CDS 448964 451222 . - 0 ID=cds-WP_023298608.1;Parent=gene-VMS06_RS02255;Dbxref=GenBank:WP_023298608.1;Name=WP_023298608.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228864.1;locus_tag=VMS06_RS02255;product=DNA topoisomerase IV subunit A;protein_id=WP_023298608.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 451341 451742 . - . ID=gene-VMS06_RS02260;Name=VMS06_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02260 NZ_JAVXZI010000001.1 Protein Homology CDS 451341 451742 . - 0 ID=cds-WP_022649408.1;Parent=gene-VMS06_RS02260;Dbxref=GenBank:WP_022649408.1;Name=WP_022649408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862501.1;locus_tag=VMS06_RS02260;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_022649408.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 451882 452541 . + . ID=gene-VMS06_RS02265;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=VMS06_RS02265 NZ_JAVXZI010000001.1 Protein Homology CDS 451882 452541 . + 0 ID=cds-WP_063147389.1;Parent=gene-VMS06_RS02265;Dbxref=GenBank:WP_063147389.1;Name=WP_063147389.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462092.1;locus_tag=VMS06_RS02265;product=quorum sensing response regulator transcription factor QseB;protein_id=WP_063147389.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 452538 453887 . + . ID=gene-VMS06_RS02270;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=VMS06_RS02270 NZ_JAVXZI010000001.1 Protein Homology CDS 452538 453887 . + 0 ID=cds-WP_023306956.1;Parent=gene-VMS06_RS02270;Dbxref=GenBank:WP_023306956.1;Name=WP_023306956.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384053.1;locus_tag=VMS06_RS02270;product=quorum sensing histidine kinase QseC;protein_id=WP_023306956.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 453992 454573 . + . ID=gene-VMS06_RS02275;Name=VMS06_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02275 NZ_JAVXZI010000001.1 Protein Homology CDS 453992 454573 . + 0 ID=cds-WP_022649411.1;Parent=gene-VMS06_RS02275;Dbxref=GenBank:WP_022649411.1;Name=WP_022649411.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462094.1;locus_tag=VMS06_RS02275;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_022649411.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 454604 454918 . + . ID=gene-VMS06_RS02280;Name=VMS06_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02280 NZ_JAVXZI010000001.1 Protein Homology CDS 454604 454918 . + 0 ID=cds-WP_003862506.1;Parent=gene-VMS06_RS02280;Dbxref=GenBank:WP_003862506.1;Name=WP_003862506.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462095.1;locus_tag=VMS06_RS02280;product=putative quinol monooxygenase;protein_id=WP_003862506.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 455070 455510 . + . ID=gene-VMS06_RS02285;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=VMS06_RS02285 NZ_JAVXZI010000001.1 Protein Homology CDS 455070 455510 . + 0 ID=cds-WP_022649412.1;Parent=gene-VMS06_RS02285;Dbxref=GenBank:WP_022649412.1;Name=WP_022649412.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885249.1;locus_tag=VMS06_RS02285;product=peptidoglycan-binding protein LysM;protein_id=WP_022649412.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 455550 456077 . + . ID=gene-VMS06_RS02290;Name=VMS06_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02290 NZ_JAVXZI010000001.1 Protein Homology CDS 455550 456077 . + 0 ID=cds-WP_022649413.1;Parent=gene-VMS06_RS02290;Dbxref=GenBank:WP_022649413.1;Name=WP_022649413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862508.1;locus_tag=VMS06_RS02290;product=hypothetical protein;protein_id=WP_022649413.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 456090 457277 . - . ID=gene-VMS06_RS02295;Name=VMS06_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02295 NZ_JAVXZI010000001.1 Protein Homology CDS 456090 457277 . - 0 ID=cds-WP_063147388.1;Parent=gene-VMS06_RS02295;Dbxref=GenBank:WP_063147388.1;Name=WP_063147388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883650.1;locus_tag=VMS06_RS02295;product=glycoside hydrolase family 88 protein;protein_id=WP_063147388.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 457306 458571 . - . ID=gene-VMS06_RS02300;Name=VMS06_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02300 NZ_JAVXZI010000001.1 Protein Homology CDS 457306 458571 . - 0 ID=cds-WP_022649415.1;Parent=gene-VMS06_RS02300;Dbxref=GenBank:WP_022649415.1;Name=WP_022649415.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571880.1;locus_tag=VMS06_RS02300;product=oligosaccharide MFS transporter;protein_id=WP_022649415.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 458603 460417 . - . ID=gene-VMS06_RS02305;Name=VMS06_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02305 NZ_JAVXZI010000001.1 Protein Homology CDS 458603 460417 . - 0 ID=cds-WP_323630607.1;Parent=gene-VMS06_RS02305;Dbxref=GenBank:WP_323630607.1;Name=WP_323630607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811976.1;locus_tag=VMS06_RS02305;product=DUF2264 domain-containing protein;protein_id=WP_323630607.1;transl_table=11 NZ_JAVXZI010000001.1 RefSeq gene 460584 461423 . + . ID=gene-VMS06_RS02310;Name=VMS06_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02310 NZ_JAVXZI010000001.1 Protein Homology CDS 460584 461423 . + 0 ID=cds-WP_022649417.1;Parent=gene-VMS06_RS02310;Dbxref=GenBank:WP_022649417.1;Name=WP_022649417.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571882.1;locus_tag=VMS06_RS02310;product=AraC family transcriptional regulator;protein_id=WP_022649417.1;transl_table=11 ##sequence-region NZ_JAVXZI010000002.1 1 447636 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000002.1 RefSeq region 1 447636 . + . ID=NZ_JAVXZI010000002.1:1..447636;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000002.1 RefSeq gene 167 637 . - . ID=gene-VMS06_RS02315;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=VMS06_RS02315 NZ_JAVXZI010000002.1 Protein Homology CDS 167 637 . - 0 ID=cds-WP_063147671.1;Parent=gene-VMS06_RS02315;Dbxref=GenBank:WP_063147671.1;Name=WP_063147671.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311369.1;locus_tag=VMS06_RS02315;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_063147671.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 637 1206 . - . ID=gene-VMS06_RS02320;Name=VMS06_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02320 NZ_JAVXZI010000002.1 Protein Homology CDS 637 1206 . - 0 ID=cds-WP_000213743.1;Parent=gene-VMS06_RS02320;Dbxref=GenBank:WP_000213743.1;Name=WP_000213743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708318.1;locus_tag=VMS06_RS02320;product=glycine cleavage system transcriptional repressor;protein_id=WP_000213743.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 1352 2230 . + . ID=gene-VMS06_RS02325;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=VMS06_RS02325 NZ_JAVXZI010000002.1 Protein Homology CDS 1352 2230 . + 0 ID=cds-WP_003860542.1;Parent=gene-VMS06_RS02325;Dbxref=GenBank:WP_003860542.1;Name=WP_003860542.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=VMS06_RS02325;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_003860542.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 2247 3281 . + . ID=gene-VMS06_RS02330;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=VMS06_RS02330 NZ_JAVXZI010000002.1 Protein Homology CDS 2247 3281 . + 0 ID=cds-WP_022648971.1;Parent=gene-VMS06_RS02330;Dbxref=GenBank:WP_022648971.1;Name=WP_022648971.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708316.2;locus_tag=VMS06_RS02330;product=outer membrane protein assembly factor BamC;protein_id=WP_022648971.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 3390 4103 . + . ID=gene-VMS06_RS02335;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=VMS06_RS02335 NZ_JAVXZI010000002.1 Protein Homology CDS 3390 4103 . + 0 ID=cds-WP_001171626.1;Parent=gene-VMS06_RS02335;Dbxref=GenBank:WP_001171626.1;Name=WP_001171626.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=VMS06_RS02335;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_001171626.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 4224 5093 . + . ID=gene-VMS06_RS02340;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=VMS06_RS02340 NZ_JAVXZI010000002.1 Protein Homology CDS 4224 5093 . + 0 ID=cds-WP_022648970.1;Parent=gene-VMS06_RS02340;Dbxref=GenBank:WP_022648970.1;Name=WP_022648970.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311364.1;locus_tag=VMS06_RS02340;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_022648970.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 5093 7039 . + . ID=gene-VMS06_RS02345;Name=VMS06_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02345 NZ_JAVXZI010000002.1 Protein Homology CDS 5093 7039 . + 0 ID=cds-WP_063147672.1;Parent=gene-VMS06_RS02345;Dbxref=GenBank:WP_063147672.1;Name=WP_063147672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383498.1;locus_tag=VMS06_RS02345;product=tRNA(Met) cytidine acetyltransferase TmcA;protein_id=WP_063147672.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 7113 7808 . + . ID=gene-VMS06_RS02350;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=VMS06_RS02350 NZ_JAVXZI010000002.1 Protein Homology CDS 7113 7808 . + 0 ID=cds-WP_023306678.1;Parent=gene-VMS06_RS02350;Dbxref=GenBank:WP_023306678.1;Name=WP_023306678.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311362.2;locus_tag=VMS06_RS02350;product=esterase;protein_id=WP_023306678.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 7847 8044 . - . ID=gene-VMS06_RS02355;Name=VMS06_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02355 NZ_JAVXZI010000002.1 Protein Homology CDS 7847 8044 . - 0 ID=cds-WP_000383991.1;Parent=gene-VMS06_RS02355;Dbxref=GenBank:WP_000383991.1;Name=WP_000383991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692950.1;locus_tag=VMS06_RS02355;product=YpfN family protein;protein_id=WP_000383991.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 8069 9196 . - . ID=gene-VMS06_RS02360;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=VMS06_RS02360 NZ_JAVXZI010000002.1 Protein Homology CDS 8069 9196 . - 0 ID=cds-WP_017383496.1;Parent=gene-VMS06_RS02360;Dbxref=GenBank:WP_017383496.1;Name=WP_017383496.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=VMS06_RS02360;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_017383496.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 9200 9556 . - . ID=gene-VMS06_RS02365;Name=VMS06_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02365 NZ_JAVXZI010000002.1 Protein Homology CDS 9200 9556 . - 0 ID=cds-WP_045309148.1;Parent=gene-VMS06_RS02365;Dbxref=GenBank:WP_045309148.1;Name=WP_045309148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176624.1;locus_tag=VMS06_RS02365;product=ArsC family reductase;protein_id=WP_045309148.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 9944 10003 . + . ID=gene-VMS06_RS02370;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=VMS06_RS02370 NZ_JAVXZI010000002.1 Protein Homology CDS 9944 10003 . + 0 ID=cds-WP_100181659.1;Parent=gene-VMS06_RS02370;Dbxref=GenBank:WP_100181659.1;Name=WP_100181659.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=VMS06_RS02370;product=protein YpfM;protein_id=WP_100181659.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 10115 13228 . - . ID=gene-VMS06_RS02375;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=VMS06_RS02375 NZ_JAVXZI010000002.1 Protein Homology CDS 10115 13228 . - 0 ID=cds-WP_022648965.1;Parent=gene-VMS06_RS02375;Dbxref=GenBank:WP_022648965.1;Name=WP_022648965.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416965.1;locus_tag=VMS06_RS02375;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_022648965.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 13370 15064 . - . ID=gene-VMS06_RS02380;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=VMS06_RS02380 NZ_JAVXZI010000002.1 Protein Homology CDS 13370 15064 . - 0 ID=cds-WP_032623807.1;Parent=gene-VMS06_RS02380;Dbxref=GenBank:WP_032623807.1;Name=WP_032623807.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383493.1;locus_tag=VMS06_RS02380;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_032623807.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 15217 17193 . + . ID=gene-VMS06_RS02385;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=VMS06_RS02385 NZ_JAVXZI010000002.1 Protein Homology CDS 15217 17193 . + 0 ID=cds-WP_074136335.1;Parent=gene-VMS06_RS02385;Dbxref=GenBank:WP_074136335.1;Name=WP_074136335.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863556.1;locus_tag=VMS06_RS02385;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_074136335.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 17261 17851 . + . ID=gene-VMS06_RS02390;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=VMS06_RS02390 NZ_JAVXZI010000002.1 Protein Homology CDS 17261 17851 . + 0 ID=cds-WP_022648962.1;Parent=gene-VMS06_RS02390;Dbxref=GenBank:WP_022648962.1;Name=WP_022648962.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811471.1;locus_tag=VMS06_RS02390;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_022648962.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 17961 19004 . + . ID=gene-VMS06_RS02395;Name=VMS06_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02395 NZ_JAVXZI010000002.1 Protein Homology CDS 17961 19004 . + 0 ID=cds-WP_063147674.1;Parent=gene-VMS06_RS02395;Dbxref=GenBank:WP_063147674.1;Name=WP_063147674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416961.1;locus_tag=VMS06_RS02395;product=DUF1176 domain-containing protein;protein_id=WP_063147674.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 19086 21074 . - . ID=gene-VMS06_RS02400;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=VMS06_RS02400 NZ_JAVXZI010000002.1 Protein Homology CDS 19086 21074 . - 0 ID=cds-WP_022648960.1;Parent=gene-VMS06_RS02400;Dbxref=GenBank:WP_022648960.1;Name=WP_022648960.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959956.1;locus_tag=VMS06_RS02400;product=transketolase;protein_id=WP_022648960.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 21094 22044 . - . ID=gene-VMS06_RS02405;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=VMS06_RS02405 NZ_JAVXZI010000002.1 Protein Homology CDS 21094 22044 . - 0 ID=cds-WP_022648959.1;Parent=gene-VMS06_RS02405;Dbxref=GenBank:WP_022648959.1;Name=WP_022648959.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461408.1;locus_tag=VMS06_RS02405;product=transaldolase;protein_id=WP_022648959.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 22331 24610 . + . ID=gene-VMS06_RS02410;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=VMS06_RS02410 NZ_JAVXZI010000002.1 Protein Homology CDS 22331 24610 . + 0 ID=cds-WP_023300666.1;Parent=gene-VMS06_RS02410;Dbxref=GenBank:WP_023300666.1;Name=WP_023300666.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461407.1;locus_tag=VMS06_RS02410;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_023300666.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 24712 25611 . - . ID=gene-VMS06_RS02415;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=VMS06_RS02415 NZ_JAVXZI010000002.1 Protein Homology CDS 24712 25611 . - 0 ID=cds-WP_063147675.1;Parent=gene-VMS06_RS02415;Dbxref=GenBank:WP_063147675.1;Name=WP_063147675.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416931.1;locus_tag=VMS06_RS02415;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_063147675.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 25611 26486 . - . ID=gene-VMS06_RS02420;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=VMS06_RS02420 NZ_JAVXZI010000002.1 Protein Homology CDS 25611 26486 . - 0 ID=cds-WP_023306670.1;Parent=gene-VMS06_RS02420;Dbxref=GenBank:WP_023306670.1;Name=WP_023306670.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311333.1;locus_tag=VMS06_RS02420;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_023306670.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 26699 27124 . + . ID=gene-VMS06_RS02425;Name=VMS06_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02425 NZ_JAVXZI010000002.1 Protein Homology CDS 26699 27124 . + 0 ID=cds-WP_003861292.1;Parent=gene-VMS06_RS02425;Dbxref=GenBank:WP_003861292.1;Name=WP_003861292.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311332.2;locus_tag=VMS06_RS02425;product=GNAT family acetyltransferase;protein_id=WP_003861292.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 27111 27560 . + . ID=gene-VMS06_RS02430;Name=VMS06_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02430 NZ_JAVXZI010000002.1 Protein Homology CDS 27111 27560 . + 0 ID=cds-WP_023306669.1;Parent=gene-VMS06_RS02430;Dbxref=GenBank:WP_023306669.1;Name=WP_023306669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383482.1;locus_tag=VMS06_RS02430;product=DUF2919 domain-containing protein;protein_id=WP_023306669.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 27624 28199 . + . ID=gene-VMS06_RS02435;Name=VMS06_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02435 NZ_JAVXZI010000002.1 Protein Homology CDS 27624 28199 . + 0 ID=cds-WP_032623819.1;Parent=gene-VMS06_RS02435;Dbxref=GenBank:WP_032623819.1;Name=WP_032623819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000838957.1;locus_tag=VMS06_RS02435;product=RpoE-regulated lipoprotein;protein_id=WP_032623819.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 28292 29191 . + . ID=gene-VMS06_RS02440;Name=VMS06_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02440 NZ_JAVXZI010000002.1 Protein Homology CDS 28292 29191 . + 0 ID=cds-WP_022648953.1;Parent=gene-VMS06_RS02440;Dbxref=GenBank:WP_022648953.1;Name=WP_022648953.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461381.1;locus_tag=VMS06_RS02440;product=Dyp-type peroxidase;protein_id=WP_022648953.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 29368 30381 . + . ID=gene-VMS06_RS02445;Name=VMS06_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02445 NZ_JAVXZI010000002.1 Protein Homology CDS 29368 30381 . + 0 ID=cds-WP_022648952.1;Parent=gene-VMS06_RS02445;Dbxref=GenBank:WP_022648952.1;Name=WP_022648952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228141.1;locus_tag=VMS06_RS02445;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_022648952.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 30381 31214 . + . ID=gene-VMS06_RS02450;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=VMS06_RS02450 NZ_JAVXZI010000002.1 Protein Homology CDS 30381 31214 . + 0 ID=cds-WP_022648951.1;Parent=gene-VMS06_RS02450;Dbxref=GenBank:WP_022648951.1;Name=WP_022648951.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=VMS06_RS02450;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_022648951.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 31214 32089 . + . ID=gene-VMS06_RS02455;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=VMS06_RS02455 NZ_JAVXZI010000002.1 Protein Homology CDS 31214 32089 . + 0 ID=cds-WP_003861305.1;Parent=gene-VMS06_RS02455;Dbxref=GenBank:WP_003861305.1;Name=WP_003861305.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311321.2;locus_tag=VMS06_RS02455;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_003861305.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 32079 33173 . + . ID=gene-VMS06_RS02460;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=VMS06_RS02460 NZ_JAVXZI010000002.1 Protein Homology CDS 32079 33173 . + 0 ID=cds-WP_022648949.1;Parent=gene-VMS06_RS02460;Dbxref=GenBank:WP_022648949.1;Name=WP_022648949.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416917.1;locus_tag=VMS06_RS02460;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_022648949.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 33241 34152 . + . ID=gene-VMS06_RS02465;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=VMS06_RS02465 NZ_JAVXZI010000002.1 Protein Homology CDS 33241 34152 . + 0 ID=cds-WP_022648948.1;Parent=gene-VMS06_RS02465;Dbxref=GenBank:WP_022648948.1;Name=WP_022648948.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process from L-serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461375.1;locus_tag=VMS06_RS02465;product=cysteine synthase CysM;protein_id=WP_022648948.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 34158 34994 . + . ID=gene-VMS06_RS02470;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=VMS06_RS02470 NZ_JAVXZI010000002.1 Protein Homology CDS 34158 34994 . + 0 ID=cds-WP_022648947.1;Parent=gene-VMS06_RS02470;Dbxref=GenBank:WP_022648947.1;Name=WP_022648947.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098200.1;locus_tag=VMS06_RS02470;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_022648947.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 35039 35542 . - . ID=gene-VMS06_RS02475;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=VMS06_RS02475 NZ_JAVXZI010000002.1 Protein Homology CDS 35039 35542 . - 0 ID=cds-WP_022648946.1;Parent=gene-VMS06_RS02475;Dbxref=GenBank:WP_022648946.1;Name=WP_022648946.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461368.1;locus_tag=VMS06_RS02475;product=PTS glucose transporter subunit IIA;protein_id=WP_022648946.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 35586 37313 . - . ID=gene-VMS06_RS02480;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=VMS06_RS02480 NZ_JAVXZI010000002.1 Protein Homology CDS 35586 37313 . - 0 ID=cds-WP_022648945.1;Parent=gene-VMS06_RS02480;Dbxref=GenBank:WP_022648945.1;Name=WP_022648945.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=VMS06_RS02480;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_022648945.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 37359 37616 . - . ID=gene-VMS06_RS02485;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=VMS06_RS02485 NZ_JAVXZI010000002.1 Protein Homology CDS 37359 37616 . - 0 ID=cds-WP_000487600.1;Parent=gene-VMS06_RS02485;Dbxref=GenBank:WP_000487600.1;Name=WP_000487600.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=VMS06_RS02485;product=phosphocarrier protein Hpr;protein_id=WP_000487600.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 37934 38905 . - . ID=gene-VMS06_RS02490;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=VMS06_RS02490 NZ_JAVXZI010000002.1 Protein Homology CDS 37934 38905 . - 0 ID=cds-WP_006811453.1;Parent=gene-VMS06_RS02490;Dbxref=GenBank:WP_006811453.1;Name=WP_006811453.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process from L-serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=VMS06_RS02490;product=cysteine synthase A;protein_id=WP_006811453.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 39069 39830 . - . ID=gene-VMS06_RS02495;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=VMS06_RS02495 NZ_JAVXZI010000002.1 Protein Homology CDS 39069 39830 . - 0 ID=cds-WP_022648944.1;Parent=gene-VMS06_RS02495;Dbxref=GenBank:WP_022648944.1;Name=WP_022648944.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461364.1;locus_tag=VMS06_RS02495;product=sulfate transporter CysZ;protein_id=WP_022648944.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 40060 41055 . + . ID=gene-VMS06_RS02500;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=VMS06_RS02500 NZ_JAVXZI010000002.1 Protein Homology CDS 40060 41055 . + 0 ID=cds-WP_063147676.1;Parent=gene-VMS06_RS02500;Dbxref=GenBank:WP_063147676.1;Name=WP_063147676.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383474.1;locus_tag=VMS06_RS02500;product=cell division protein ZipA;protein_id=WP_063147676.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 41124 43139 . + . ID=gene-VMS06_RS02505;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=VMS06_RS02505 NZ_JAVXZI010000002.1 Protein Homology CDS 41124 43139 . + 0 ID=cds-WP_032623825.1;Parent=gene-VMS06_RS02505;Dbxref=GenBank:WP_032623825.1;Name=WP_032623825.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861327.1;locus_tag=VMS06_RS02505;product=NAD-dependent DNA ligase LigA;protein_id=WP_032623825.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 43141 43356 . + . ID=gene-VMS06_RS02510;Name=VMS06_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02510 NZ_JAVXZI010000002.1 Protein Homology CDS 43141 43356 . + 0 ID=cds-WP_048959525.1;Parent=gene-VMS06_RS02510;Dbxref=GenBank:WP_048959525.1;Name=WP_048959525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692969.1;locus_tag=VMS06_RS02510;product=DUF3820 family protein;protein_id=WP_048959525.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 43353 44348 . - . ID=gene-VMS06_RS02515;Name=VMS06_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02515 NZ_JAVXZI010000002.1 Protein Homology CDS 43353 44348 . - 0 ID=cds-WP_022648941.1;Parent=gene-VMS06_RS02515;Dbxref=GenBank:WP_022648941.1;Name=WP_022648941.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692970.1;locus_tag=VMS06_RS02515;product=bile acid:sodium symporter family protein;protein_id=WP_022648941.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 44438 45379 . + . ID=gene-VMS06_RS02520;Name=VMS06_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02520 NZ_JAVXZI010000002.1 Protein Homology CDS 44438 45379 . + 0 ID=cds-WP_032676151.1;Parent=gene-VMS06_RS02520;Dbxref=GenBank:WP_032676151.1;Name=WP_032676151.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383472.1;locus_tag=VMS06_RS02520;product=LysR family transcriptional regulator;protein_id=WP_032676151.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 45370 45711 . - . ID=gene-VMS06_RS02525;Name=VMS06_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02525 NZ_JAVXZI010000002.1 Protein Homology CDS 45370 45711 . - 0 ID=cds-WP_022648939.1;Parent=gene-VMS06_RS02525;Dbxref=GenBank:WP_022648939.1;Name=WP_022648939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383471.1;locus_tag=VMS06_RS02525;product=FlxA-like family protein;protein_id=WP_022648939.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 45849 45924 . - . ID=gene-VMS06_RS02530;Name=VMS06_RS02530;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS02530 NZ_JAVXZI010000002.1 tRNAscan-SE tRNA 45849 45924 . - . ID=rna-VMS06_RS02530;Parent=gene-VMS06_RS02530;anticodon=(pos:complement(45889..45891));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02530;product=tRNA-Lys NZ_JAVXZI010000002.1 tRNAscan-SE exon 45849 45924 . - . ID=exon-VMS06_RS02530-1;Parent=rna-VMS06_RS02530;anticodon=(pos:complement(45889..45891));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02530;product=tRNA-Lys NZ_JAVXZI010000002.1 RefSeq gene 45929 46004 . - . ID=gene-VMS06_RS02535;Name=VMS06_RS02535;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS02535 NZ_JAVXZI010000002.1 tRNAscan-SE tRNA 45929 46004 . - . ID=rna-VMS06_RS02535;Parent=gene-VMS06_RS02535;anticodon=(pos:complement(45969..45971));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02535;product=tRNA-Val NZ_JAVXZI010000002.1 tRNAscan-SE exon 45929 46004 . - . ID=exon-VMS06_RS02535-1;Parent=rna-VMS06_RS02535;anticodon=(pos:complement(45969..45971));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02535;product=tRNA-Val NZ_JAVXZI010000002.1 RefSeq gene 46034 46109 . - . ID=gene-VMS06_RS02540;Name=VMS06_RS02540;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS02540 NZ_JAVXZI010000002.1 tRNAscan-SE tRNA 46034 46109 . - . ID=rna-VMS06_RS02540;Parent=gene-VMS06_RS02540;anticodon=(pos:complement(46074..46076));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02540;product=tRNA-Val NZ_JAVXZI010000002.1 tRNAscan-SE exon 46034 46109 . - . ID=exon-VMS06_RS02540-1;Parent=rna-VMS06_RS02540;anticodon=(pos:complement(46074..46076));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02540;product=tRNA-Val NZ_JAVXZI010000002.1 RefSeq gene 46151 46226 . - . ID=gene-VMS06_RS02545;Name=VMS06_RS02545;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS02545 NZ_JAVXZI010000002.1 tRNAscan-SE tRNA 46151 46226 . - . ID=rna-VMS06_RS02545;Parent=gene-VMS06_RS02545;anticodon=(pos:complement(46191..46193));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02545;product=tRNA-Val NZ_JAVXZI010000002.1 tRNAscan-SE exon 46151 46226 . - . ID=exon-VMS06_RS02545-1;Parent=rna-VMS06_RS02545;anticodon=(pos:complement(46191..46193));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02545;product=tRNA-Val NZ_JAVXZI010000002.1 RefSeq gene 46485 47900 . + . ID=gene-VMS06_RS02550;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=VMS06_RS02550 NZ_JAVXZI010000002.1 Protein Homology CDS 46485 47900 . + 0 ID=cds-WP_022648938.1;Parent=gene-VMS06_RS02550;Dbxref=GenBank:WP_022648938.1;Name=WP_022648938.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461354.1;locus_tag=VMS06_RS02550;product=glutamate--tRNA ligase;protein_id=WP_022648938.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 47951 48337 . - . ID=gene-VMS06_RS02555;Name=VMS06_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02555 NZ_JAVXZI010000002.1 Protein Homology CDS 47951 48337 . - 0 ID=cds-WP_032622330.1;Parent=gene-VMS06_RS02555;Dbxref=GenBank:WP_032622330.1;Name=WP_032622330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383469.1;locus_tag=VMS06_RS02555;product=YfeC-like transcriptional regulator;protein_id=WP_032622330.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 48339 48701 . - . ID=gene-VMS06_RS02560;Name=VMS06_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02560 NZ_JAVXZI010000002.1 Protein Homology CDS 48339 48701 . - 0 ID=cds-WP_022648936.1;Parent=gene-VMS06_RS02560;Dbxref=GenBank:WP_022648936.1;Name=WP_022648936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000472037.1;locus_tag=VMS06_RS02560;product=YfeC-like transcriptional regulator;protein_id=WP_022648936.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 48919 48994 . + . ID=gene-VMS06_RS02565;Name=VMS06_RS02565;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS02565 NZ_JAVXZI010000002.1 tRNAscan-SE tRNA 48919 48994 . + . ID=rna-VMS06_RS02565;Parent=gene-VMS06_RS02565;anticodon=(pos:48952..48954);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02565;product=tRNA-Ala NZ_JAVXZI010000002.1 tRNAscan-SE exon 48919 48994 . + . ID=exon-VMS06_RS02565-1;Parent=rna-VMS06_RS02565;anticodon=(pos:48952..48954);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02565;product=tRNA-Ala NZ_JAVXZI010000002.1 RefSeq gene 49036 49111 . + . ID=gene-VMS06_RS02570;Name=VMS06_RS02570;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS02570 NZ_JAVXZI010000002.1 tRNAscan-SE tRNA 49036 49111 . + . ID=rna-VMS06_RS02570;Parent=gene-VMS06_RS02570;anticodon=(pos:49069..49071);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02570;product=tRNA-Ala NZ_JAVXZI010000002.1 tRNAscan-SE exon 49036 49111 . + . ID=exon-VMS06_RS02570-1;Parent=rna-VMS06_RS02570;anticodon=(pos:49069..49071);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02570;product=tRNA-Ala NZ_JAVXZI010000002.1 RefSeq gene 49322 51511 . + . ID=gene-VMS06_RS02575;Name=VMS06_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02575 NZ_JAVXZI010000002.1 Protein Homology CDS 49322 51511 . + 0 ID=cds-WP_022648935.1;Parent=gene-VMS06_RS02575;Dbxref=GenBank:WP_022648935.1;Name=WP_022648935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811441.1;locus_tag=VMS06_RS02575;product=EAL domain-containing protein;protein_id=WP_022648935.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 51557 52744 . - . ID=gene-VMS06_RS02580;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=VMS06_RS02580 NZ_JAVXZI010000002.1 Protein Homology CDS 51557 52744 . - 0 ID=cds-WP_022648934.1;Parent=gene-VMS06_RS02580;Dbxref=GenBank:WP_022648934.1;Name=WP_022648934.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461350.1;locus_tag=VMS06_RS02580;product=nucleoside permease NupC;protein_id=WP_022648934.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 53090 54328 . + . ID=gene-VMS06_RS02585;Name=VMS06_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02585 NZ_JAVXZI010000002.1 Protein Homology CDS 53090 54328 . + 0 ID=cds-WP_023300656.1;Parent=gene-VMS06_RS02585;Dbxref=GenBank:WP_023300656.1;Name=WP_023300656.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311298.1;locus_tag=VMS06_RS02585;product=Nramp family divalent metal transporter;protein_id=WP_023300656.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 54362 54709 . - . ID=gene-VMS06_RS02590;Name=ypeC;gbkey=Gene;gene=ypeC;gene_biotype=protein_coding;locus_tag=VMS06_RS02590 NZ_JAVXZI010000002.1 Protein Homology CDS 54362 54709 . - 0 ID=cds-WP_022648932.1;Parent=gene-VMS06_RS02590;Dbxref=GenBank:WP_022648932.1;Name=WP_022648932.1;gbkey=CDS;gene=ypeC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861345.1;locus_tag=VMS06_RS02590;product=DUF2502 domain-containing protein YpeC;protein_id=WP_022648932.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 54837 55835 . - . ID=gene-VMS06_RS02595;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=VMS06_RS02595 NZ_JAVXZI010000002.1 Protein Homology CDS 54837 55835 . - 0 ID=cds-WP_023300655.1;Parent=gene-VMS06_RS02595;Dbxref=GenBank:WP_023300655.1;Name=WP_023300655.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383465.1;locus_tag=VMS06_RS02595;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_023300655.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 56022 57680 . + . ID=gene-VMS06_RS02600;Name=ipdC;gbkey=Gene;gene=ipdC;gene_biotype=protein_coding;locus_tag=VMS06_RS02600 NZ_JAVXZI010000002.1 Protein Homology CDS 56022 57680 . + 0 ID=cds-WP_038416470.1;Parent=gene-VMS06_RS02600;Dbxref=GenBank:WP_038416470.1;Name=WP_038416470.1;Ontology_term=GO:0009851,GO:0047434;gbkey=CDS;gene=ipdC;go_function=indolepyruvate decarboxylase activity|0047434||IEA;go_process=auxin biosynthetic process|0009851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883100.1;locus_tag=VMS06_RS02600;product=indolepyruvate decarboxylase;protein_id=WP_038416470.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 57681 58916 . - . ID=gene-VMS06_RS02605;Name=VMS06_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02605 NZ_JAVXZI010000002.1 Protein Homology CDS 57681 58916 . - 0 ID=cds-WP_063147677.1;Parent=gene-VMS06_RS02605;Dbxref=GenBank:WP_063147677.1;Name=WP_063147677.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150726.1;locus_tag=VMS06_RS02605;product=ion channel protein;protein_id=WP_063147677.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 59122 60087 . + . ID=gene-VMS06_RS02610;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=VMS06_RS02610 NZ_JAVXZI010000002.1 Protein Homology CDS 59122 60087 . + 0 ID=cds-WP_022648928.1;Parent=gene-VMS06_RS02610;Dbxref=GenBank:WP_022648928.1;Name=WP_022648928.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,D-glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228110.1;locus_tag=VMS06_RS02610;product=glucokinase;protein_id=WP_022648928.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 60123 60854 . - . ID=gene-VMS06_RS02615;Name=VMS06_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02615 NZ_JAVXZI010000002.1 Protein Homology CDS 60123 60854 . - 0 ID=cds-WP_032622329.1;Parent=gene-VMS06_RS02615;Dbxref=GenBank:WP_032622329.1;Name=WP_032622329.1;Ontology_term=GO:0000160,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=VMS06_RS02615;product=LytR/AlgR family response regulator transcription factor;protein_id=WP_032622329.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 60868 62565 . - . ID=gene-VMS06_RS02620;Name=VMS06_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02620 NZ_JAVXZI010000002.1 Protein Homology CDS 60868 62565 . - 0 ID=cds-WP_045308680.1;Parent=gene-VMS06_RS02620;Dbxref=GenBank:WP_045308680.1;Name=WP_045308680.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171061.1;locus_tag=VMS06_RS02620;product=sensor histidine kinase;protein_id=WP_045308680.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 62952 64187 . + . ID=gene-VMS06_RS02625;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=VMS06_RS02625 NZ_JAVXZI010000002.1 Protein Homology CDS 62952 64187 . + 0 ID=cds-WP_023300650.1;Parent=gene-VMS06_RS02625;Dbxref=GenBank:WP_023300650.1;Name=WP_023300650.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811430.1;locus_tag=VMS06_RS02625;product=alanine transaminase;protein_id=WP_023300650.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 64245 64316 . - . ID=gene-VMS06_RS02630;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=VMS06_RS02630 NZ_JAVXZI010000002.1 Protein Homology CDS 64245 64316 . - 0 ID=cds-WP_099458937.1;Parent=gene-VMS06_RS02630;Dbxref=GenBank:WP_099458937.1;Name=WP_099458937.1;Ontology_term=GO:0016020;gbkey=CDS;gene=ypdK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=VMS06_RS02630;product=membrane protein YpdK;protein_id=WP_099458937.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 64676 65596 . - . ID=gene-VMS06_RS02635;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=VMS06_RS02635 NZ_JAVXZI010000002.1 Protein Homology CDS 64676 65596 . - 0 ID=cds-WP_169808437.1;Parent=gene-VMS06_RS02635;Dbxref=GenBank:WP_169808437.1;Name=WP_169808437.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311285.2;locus_tag=VMS06_RS02635;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_169808437.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 65845 65916 . - . ID=gene-VMS06_RS02640;Name=VMS06_RS02640;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS02640 NZ_JAVXZI010000002.1 tRNAscan-SE tRNA 65845 65916 . - . ID=rna-VMS06_RS02640;Parent=gene-VMS06_RS02640;anticodon=(pos:complement(65881..65883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02640;product=tRNA-Arg NZ_JAVXZI010000002.1 tRNAscan-SE exon 65845 65916 . - . ID=exon-VMS06_RS02640-1;Parent=rna-VMS06_RS02640;anticodon=(pos:complement(65881..65883));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS02640;product=tRNA-Arg NZ_JAVXZI010000002.1 RefSeq gene 65992 66921 . - . ID=gene-VMS06_RS02645;Name=VMS06_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02645 NZ_JAVXZI010000002.1 Protein Homology CDS 65992 66921 . - 0 ID=cds-WP_022648872.1;Parent=gene-VMS06_RS02645;Dbxref=GenBank:WP_022648872.1;Name=WP_022648872.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861364.1;locus_tag=VMS06_RS02645;product=formate/nitrite transporter family protein;protein_id=WP_022648872.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 67236 67988 . + . ID=gene-VMS06_RS02650;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=VMS06_RS02650 NZ_JAVXZI010000002.1 Protein Homology CDS 67236 67988 . + 0 ID=cds-WP_022648871.1;Parent=gene-VMS06_RS02650;Dbxref=GenBank:WP_022648871.1;Name=WP_022648871.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461334.1;locus_tag=VMS06_RS02650;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_022648871.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 68033 69316 . - . ID=gene-VMS06_RS02655;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=VMS06_RS02655 NZ_JAVXZI010000002.1 Protein Homology CDS 68033 69316 . - 0 ID=cds-WP_022648870.1;Parent=gene-VMS06_RS02655;Dbxref=GenBank:WP_022648870.1;Name=WP_022648870.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884687.1;locus_tag=VMS06_RS02655;product=long-chain fatty acid transporter FadL;protein_id=WP_022648870.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 69689 69973 . + . ID=gene-VMS06_RS02660;Name=VMS06_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02660 NZ_JAVXZI010000002.1 Protein Homology CDS 69689 69973 . + 0 ID=cds-WP_022648869.1;Parent=gene-VMS06_RS02660;Dbxref=GenBank:WP_022648869.1;Name=WP_022648869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129756.1;locus_tag=VMS06_RS02660;product=YfcZ/YiiS family protein;protein_id=WP_022648869.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 70211 71521 . + . ID=gene-VMS06_RS02665;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=VMS06_RS02665 NZ_JAVXZI010000002.1 Protein Homology CDS 70211 71521 . + 0 ID=cds-WP_022648868.1;Parent=gene-VMS06_RS02665;Dbxref=GenBank:WP_022648868.1;Name=WP_022648868.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadI;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416844.1;locus_tag=VMS06_RS02665;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_022648868.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 71521 73668 . + . ID=gene-VMS06_RS02670;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=VMS06_RS02670 NZ_JAVXZI010000002.1 Protein Homology CDS 71521 73668 . + 0 ID=cds-WP_063147679.1;Parent=gene-VMS06_RS02670;Dbxref=GenBank:WP_063147679.1;Name=WP_063147679.1;Ontology_term=GO:0009062,GO:0003857,GO:0004300,GO:0008692,GO:0051287;gbkey=CDS;gene=fadJ;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,NAD binding|0051287||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861373.1;locus_tag=VMS06_RS02670;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_063147679.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 73878 74363 . + . ID=gene-VMS06_RS02675;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=VMS06_RS02675 NZ_JAVXZI010000002.1 Protein Homology CDS 73878 74363 . + 0 ID=cds-WP_003861375.1;Parent=gene-VMS06_RS02675;Dbxref=GenBank:WP_003861375.1;Name=WP_003861375.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311250.1;locus_tag=VMS06_RS02675;product=phosphohistidine phosphatase SixA;protein_id=WP_003861375.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 74410 74961 . - . ID=gene-VMS06_RS02680;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=VMS06_RS02680 NZ_JAVXZI010000002.1 Protein Homology CDS 74410 74961 . - 0 ID=cds-WP_022648866.1;Parent=gene-VMS06_RS02680;Dbxref=GenBank:WP_022648866.1;Name=WP_022648866.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017899504.1;locus_tag=VMS06_RS02680;product=endonuclease SmrB;protein_id=WP_022648866.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 75107 76039 . + . ID=gene-VMS06_RS02685;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=VMS06_RS02685 NZ_JAVXZI010000002.1 Protein Homology CDS 75107 76039 . + 0 ID=cds-WP_022648865.1;Parent=gene-VMS06_RS02685;Dbxref=GenBank:WP_022648865.1;Name=WP_022648865.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=VMS06_RS02685;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_022648865.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 76100 77185 . + . ID=gene-VMS06_RS02690;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=VMS06_RS02690 NZ_JAVXZI010000002.1 Protein Homology CDS 76100 77185 . + 0 ID=cds-WP_022648864.1;Parent=gene-VMS06_RS02690;Dbxref=GenBank:WP_022648864.1;Name=WP_022648864.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=VMS06_RS02690;product=chorismate synthase;protein_id=WP_022648864.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 77188 78012 . + . ID=gene-VMS06_RS02695;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=VMS06_RS02695 NZ_JAVXZI010000002.1 Protein Homology CDS 77188 78012 . + 0 ID=cds-WP_063147680.1;Parent=gene-VMS06_RS02695;Dbxref=GenBank:WP_063147680.1;Name=WP_063147680.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416831.1;locus_tag=VMS06_RS02695;product=penicillin-insensitive murein endopeptidase;protein_id=WP_063147680.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 78012 78821 . + . ID=gene-VMS06_RS02700;Name=VMS06_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02700 NZ_JAVXZI010000002.1 Protein Homology CDS 78012 78821 . + 0 ID=cds-WP_022648863.1;Parent=gene-VMS06_RS02700;Dbxref=GenBank:WP_022648863.1;Name=WP_022648863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461324.1;locus_tag=VMS06_RS02700;product=sulfite exporter TauE/SafE family protein;protein_id=WP_022648863.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 78821 79366 . + . ID=gene-VMS06_RS02705;Name=VMS06_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02705 NZ_JAVXZI010000002.1 Protein Homology CDS 78821 79366 . + 0 ID=cds-WP_023300646.1;Parent=gene-VMS06_RS02705;Dbxref=GenBank:WP_023300646.1;Name=WP_023300646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861390.1;locus_tag=VMS06_RS02705;product=elongation factor P hydroxylase;protein_id=WP_023300646.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 79380 79655 . + . ID=gene-VMS06_RS02710;Name=VMS06_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02710 NZ_JAVXZI010000002.1 Protein Homology CDS 79380 79655 . + 0 ID=cds-WP_022648861.1;Parent=gene-VMS06_RS02710;Dbxref=GenBank:WP_022648861.1;Name=WP_022648861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502607.1;locus_tag=VMS06_RS02710;product=YfcL family protein;protein_id=WP_022648861.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 79721 81718 . - . ID=gene-VMS06_RS02715;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=VMS06_RS02715 NZ_JAVXZI010000002.1 Protein Homology CDS 79721 81718 . - 0 ID=cds-WP_063147681.1;Parent=gene-VMS06_RS02715;Dbxref=GenBank:WP_063147681.1;Name=WP_063147681.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383450.1;locus_tag=VMS06_RS02715;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmC2/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC1;protein_id=WP_063147681.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 81877 83094 . + . ID=gene-VMS06_RS02720;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=VMS06_RS02720 NZ_JAVXZI010000002.1 Protein Homology CDS 81877 83094 . + 0 ID=cds-WP_022648859.1;Parent=gene-VMS06_RS02720;Dbxref=GenBank:WP_022648859.1;Name=WP_022648859.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433229.1;locus_tag=VMS06_RS02720;product=beta-ketoacyl-ACP synthase I;protein_id=WP_022648859.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 83163 84341 . + . ID=gene-VMS06_RS02725;Name=VMS06_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02725 NZ_JAVXZI010000002.1 Protein Homology CDS 83163 84341 . + 0 ID=cds-WP_063147682.1;Parent=gene-VMS06_RS02725;Dbxref=GenBank:WP_063147682.1;Name=WP_063147682.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692989.1;locus_tag=VMS06_RS02725;product=MFS transporter;protein_id=WP_063147682.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 84426 85430 . - . ID=gene-VMS06_RS02730;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=VMS06_RS02730 NZ_JAVXZI010000002.1 Protein Homology CDS 84426 85430 . - 0 ID=cds-WP_045621148.1;Parent=gene-VMS06_RS02730;Dbxref=GenBank:WP_045621148.1;Name=WP_045621148.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884672.1;locus_tag=VMS06_RS02730;product=flagella biosynthesis regulator Flk;protein_id=WP_045621148.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 85542 86678 . + . ID=gene-VMS06_RS02735;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=VMS06_RS02735 NZ_JAVXZI010000002.1 Protein Homology CDS 85542 86678 . + 0 ID=cds-WP_063147683.1;Parent=gene-VMS06_RS02735;Dbxref=GenBank:WP_063147683.1;Name=WP_063147683.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416823.1;locus_tag=VMS06_RS02735;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_063147683.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 86746 87759 . + . ID=gene-VMS06_RS02740;Name=VMS06_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02740 NZ_JAVXZI010000002.1 Protein Homology CDS 86746 87759 . + 0 ID=cds-WP_023306649.1;Parent=gene-VMS06_RS02740;Dbxref=GenBank:WP_023306649.1;Name=WP_023306649.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228078.1;locus_tag=VMS06_RS02740;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_023306649.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 87759 88571 . + . ID=gene-VMS06_RS02745;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=VMS06_RS02745 NZ_JAVXZI010000002.1 Protein Homology CDS 87759 88571 . + 0 ID=cds-WP_001286071.1;Parent=gene-VMS06_RS02745;Dbxref=GenBank:WP_001286071.1;Name=WP_001286071.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311229.1;locus_tag=VMS06_RS02745;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_001286071.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 88600 89259 . + . ID=gene-VMS06_RS02750;Name=VMS06_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02750 NZ_JAVXZI010000002.1 Protein Homology CDS 88600 89259 . + 0 ID=cds-WP_006811410.1;Parent=gene-VMS06_RS02750;Dbxref=GenBank:WP_006811410.1;Name=WP_006811410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228076.1;locus_tag=VMS06_RS02750;product=DedA family protein;protein_id=WP_006811410.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 89414 90319 . + . ID=gene-VMS06_RS02755;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=VMS06_RS02755 NZ_JAVXZI010000002.1 Protein Homology CDS 89414 90319 . + 0 ID=cds-WP_022648854.1;Parent=gene-VMS06_RS02755;Dbxref=GenBank:WP_022648854.1;Name=WP_022648854.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461308.1;locus_tag=VMS06_RS02755;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_022648854.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 90390 91658 . + . ID=gene-VMS06_RS02760;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=VMS06_RS02760 NZ_JAVXZI010000002.1 Protein Homology CDS 90390 91658 . + 0 ID=cds-WP_063146677.1;Parent=gene-VMS06_RS02760;Dbxref=GenBank:WP_063146677.1;Name=WP_063146677.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461307.1;locus_tag=VMS06_RS02760;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_063146677.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 91648 92334 . + . ID=gene-VMS06_RS02765;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=VMS06_RS02765 NZ_JAVXZI010000002.1 Protein Homology CDS 91648 92334 . + 0 ID=cds-WP_023300639.1;Parent=gene-VMS06_RS02765;Dbxref=GenBank:WP_023300639.1;Name=WP_023300639.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461306.1;locus_tag=VMS06_RS02765;product=cell division protein DedD;protein_id=WP_023300639.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 92589 93077 . + . ID=gene-VMS06_RS02770;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=VMS06_RS02770 NZ_JAVXZI010000002.1 Protein Homology CDS 92589 93077 . + 0 ID=cds-WP_000262116.1;Parent=gene-VMS06_RS02770;Dbxref=GenBank:WP_000262116.1;Name=WP_000262116.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311224.1;locus_tag=VMS06_RS02770;product=colicin V production protein;protein_id=WP_000262116.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 93111 94628 . + . ID=gene-VMS06_RS02775;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=VMS06_RS02775 NZ_JAVXZI010000002.1 Protein Homology CDS 93111 94628 . + 0 ID=cds-WP_008502595.1;Parent=gene-VMS06_RS02775;Dbxref=GenBank:WP_008502595.1;Name=WP_008502595.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=VMS06_RS02775;product=amidophosphoribosyltransferase;protein_id=WP_008502595.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 94718 95287 . + . ID=gene-VMS06_RS02780;Name=VMS06_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02780 NZ_JAVXZI010000002.1 Protein Homology CDS 94718 95287 . + 0 ID=cds-WP_015572254.1;Parent=gene-VMS06_RS02780;Dbxref=GenBank:WP_015572254.1;Name=WP_015572254.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120208.1;locus_tag=VMS06_RS02780;product=UbiX family flavin prenyltransferase;protein_id=WP_015572254.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 95578 96360 . + . ID=gene-VMS06_RS02785;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=VMS06_RS02785 NZ_JAVXZI010000002.1 Protein Homology CDS 95578 96360 . + 0 ID=cds-WP_063147684.1;Parent=gene-VMS06_RS02785;Dbxref=GenBank:WP_063147684.1;Name=WP_063147684.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461297.1;locus_tag=VMS06_RS02785;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_063147684.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 96585 97367 . + . ID=gene-VMS06_RS02790;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=VMS06_RS02790 NZ_JAVXZI010000002.1 Protein Homology CDS 96585 97367 . + 0 ID=cds-WP_003861421.1;Parent=gene-VMS06_RS02790;Dbxref=GenBank:WP_003861421.1;Name=WP_003861421.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311220.1;locus_tag=VMS06_RS02790;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_003861421.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 97456 98142 . + . ID=gene-VMS06_RS02795;Name=VMS06_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02795 NZ_JAVXZI010000002.1 Protein Homology CDS 97456 98142 . + 0 ID=cds-WP_006811404.1;Parent=gene-VMS06_RS02795;Dbxref=GenBank:WP_006811404.1;Name=WP_006811404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=VMS06_RS02795;product=histidine ABC transporter permease HisQ;protein_id=WP_006811404.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 98139 98852 . + . ID=gene-VMS06_RS02800;Name=VMS06_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02800 NZ_JAVXZI010000002.1 Protein Homology CDS 98139 98852 . + 0 ID=cds-WP_003861424.1;Parent=gene-VMS06_RS02800;Dbxref=GenBank:WP_003861424.1;Name=WP_003861424.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228065.1;locus_tag=VMS06_RS02800;product=ABC transporter permease;protein_id=WP_003861424.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 98862 99635 . + . ID=gene-VMS06_RS02805;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=VMS06_RS02805 NZ_JAVXZI010000002.1 Protein Homology CDS 98862 99635 . + 0 ID=cds-WP_003861426.1;Parent=gene-VMS06_RS02805;Dbxref=GenBank:WP_003861426.1;Name=WP_003861426.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311217.1;locus_tag=VMS06_RS02805;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_003861426.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 99775 100284 . - . ID=gene-VMS06_RS02810;Name=VMS06_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02810 NZ_JAVXZI010000002.1 Protein Homology CDS 99775 100284 . - 0 ID=cds-WP_045308691.1;Parent=gene-VMS06_RS02810;Dbxref=GenBank:WP_045308691.1;Name=WP_045308691.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433276.1;locus_tag=VMS06_RS02810;product=GNAT family N-acetyltransferase;protein_id=WP_045308691.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 100329 101222 . - . ID=gene-VMS06_RS02815;Name=VMS06_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02815 NZ_JAVXZI010000002.1 Protein Homology CDS 100329 101222 . - 0 ID=cds-WP_058647003.1;Parent=gene-VMS06_RS02815;Dbxref=GenBank:WP_058647003.1;Name=WP_058647003.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416807.1;locus_tag=VMS06_RS02815;product=TIGR01777 family oxidoreductase;protein_id=WP_058647003.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 101236 101604 . - . ID=gene-VMS06_RS02820;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=VMS06_RS02820 NZ_JAVXZI010000002.1 Protein Homology CDS 101236 101604 . - 0 ID=cds-WP_063147685.1;Parent=gene-VMS06_RS02820;Dbxref=GenBank:WP_063147685.1;Name=WP_063147685.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883131.1;locus_tag=VMS06_RS02820;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_063147685.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 101680 102309 . - . ID=gene-VMS06_RS02825;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=VMS06_RS02825 NZ_JAVXZI010000002.1 Protein Homology CDS 101680 102309 . - 0 ID=cds-WP_022648841.1;Parent=gene-VMS06_RS02825;Dbxref=GenBank:WP_022648841.1;Name=WP_022648841.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883132.1;locus_tag=VMS06_RS02825;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_022648841.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 102450 103094 . + . ID=gene-VMS06_RS02830;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=VMS06_RS02830 NZ_JAVXZI010000002.1 Protein Homology CDS 102450 103094 . + 0 ID=cds-WP_023300634.1;Parent=gene-VMS06_RS02830;Dbxref=GenBank:WP_023300634.1;Name=WP_023300634.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461290.1;locus_tag=VMS06_RS02830;product=glutathione transferase;protein_id=WP_023300634.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 103151 103702 . + . ID=gene-VMS06_RS02835;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=VMS06_RS02835 NZ_JAVXZI010000002.1 Protein Homology CDS 103151 103702 . + 0 ID=cds-WP_063147686.1;Parent=gene-VMS06_RS02835;Dbxref=GenBank:WP_063147686.1;Name=WP_063147686.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311211.4;locus_tag=VMS06_RS02835;product=phosphodiesterase;protein_id=WP_063147686.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 103758 104324 . + . ID=gene-VMS06_RS02840;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=VMS06_RS02840 NZ_JAVXZI010000002.1 Protein Homology CDS 103758 104324 . + 0 ID=cds-WP_006811396.1;Parent=gene-VMS06_RS02840;Dbxref=GenBank:WP_006811396.1;Name=WP_006811396.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003839343.1;locus_tag=VMS06_RS02840;product=NUDIX hydrolase YfcD;protein_id=WP_006811396.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 104328 105347 . - . ID=gene-VMS06_RS02845;Name=VMS06_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02845 NZ_JAVXZI010000002.1 Protein Homology CDS 104328 105347 . - 0 ID=cds-WP_003861441.1;Parent=gene-VMS06_RS02845;Dbxref=GenBank:WP_003861441.1;Name=WP_003861441.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461287.1;locus_tag=VMS06_RS02845;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_003861441.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 105584 106027 . + . ID=gene-VMS06_RS02850;Name=VMS06_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02850 NZ_JAVXZI010000002.1 Protein Homology CDS 105584 106027 . + 0 ID=cds-WP_063147687.1;Parent=gene-VMS06_RS02850;Dbxref=GenBank:WP_063147687.1;Name=WP_063147687.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0034219,GO:0008982,GO:0016301,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383438.1;locus_tag=VMS06_RS02850;product=PTS sugar transporter subunit IIA;protein_id=WP_063147687.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 106107 106379 . + . ID=gene-VMS06_RS02855;Name=VMS06_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02855 NZ_JAVXZI010000002.1 Protein Homology CDS 106107 106379 . + 0 ID=cds-WP_003861447.1;Parent=gene-VMS06_RS02855;Dbxref=GenBank:WP_003861447.1;Name=WP_003861447.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461285.1;locus_tag=VMS06_RS02855;product=PTS sugar transporter subunit IIB;protein_id=WP_003861447.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 106401 107792 . + . ID=gene-VMS06_RS02860;Name=VMS06_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02860 NZ_JAVXZI010000002.1 Protein Homology CDS 106401 107792 . + 0 ID=cds-WP_017383437.1;Parent=gene-VMS06_RS02860;Dbxref=GenBank:WP_017383437.1;Name=WP_017383437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811393.1;locus_tag=VMS06_RS02860;product=PTS ascorbate transporter subunit IIC;protein_id=WP_017383437.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 107789 108619 . + . ID=gene-VMS06_RS02865;Name=VMS06_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02865 NZ_JAVXZI010000002.1 Protein Homology CDS 107789 108619 . + 0 ID=cds-WP_023300630.1;Parent=gene-VMS06_RS02865;Dbxref=GenBank:WP_023300630.1;Name=WP_023300630.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461283.1;locus_tag=VMS06_RS02865;product=transketolase;protein_id=WP_023300630.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 108612 109565 . + . ID=gene-VMS06_RS02870;Name=VMS06_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02870 NZ_JAVXZI010000002.1 Protein Homology CDS 108612 109565 . + 0 ID=cds-WP_023306640.1;Parent=gene-VMS06_RS02870;Dbxref=GenBank:WP_023306640.1;Name=WP_023306640.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461282.1;locus_tag=VMS06_RS02870;product=transketolase family protein;protein_id=WP_023306640.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 109676 111817 . - . ID=gene-VMS06_RS02875;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=VMS06_RS02875 NZ_JAVXZI010000002.1 Protein Homology CDS 109676 111817 . - 0 ID=cds-WP_022648836.1;Parent=gene-VMS06_RS02875;Dbxref=GenBank:WP_022648836.1;Name=WP_022648836.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129493.1;locus_tag=VMS06_RS02875;product=phosphate acetyltransferase;protein_id=WP_022648836.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 111893 113095 . - . ID=gene-VMS06_RS02880;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=VMS06_RS02880 NZ_JAVXZI010000002.1 Protein Homology CDS 111893 113095 . - 0 ID=cds-WP_022648835.1;Parent=gene-VMS06_RS02880;Dbxref=GenBank:WP_022648835.1;Name=WP_022648835.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=VMS06_RS02880;product=acetate kinase;protein_id=WP_022648835.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 113431 113886 . + . ID=gene-VMS06_RS02885;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=VMS06_RS02885 NZ_JAVXZI010000002.1 Protein Homology CDS 113431 113886 . + 0 ID=cds-WP_003861459.1;Parent=gene-VMS06_RS02885;Dbxref=GenBank:WP_003861459.1;Name=WP_003861459.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461278.1;locus_tag=VMS06_RS02885;product=terminus macrodomain insulation protein YfbV;protein_id=WP_003861459.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 113979 114473 . + . ID=gene-VMS06_RS02890;Name=VMS06_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02890 NZ_JAVXZI010000002.1 Protein Homology CDS 113979 114473 . + 0 ID=cds-WP_008502874.1;Parent=gene-VMS06_RS02890;Dbxref=GenBank:WP_008502874.1;Name=WP_008502874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=VMS06_RS02890;product=YfbU family protein;protein_id=WP_008502874.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 114485 115144 . + . ID=gene-VMS06_RS02895;Name=VMS06_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02895 NZ_JAVXZI010000002.1 Protein Homology CDS 114485 115144 . + 0 ID=cds-WP_022648834.1;Parent=gene-VMS06_RS02895;Dbxref=GenBank:WP_022648834.1;Name=WP_022648834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861463.1;locus_tag=VMS06_RS02895;product=sugar phosphatase;protein_id=WP_022648834.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 115220 117052 . + . ID=gene-VMS06_RS02900;Name=VMS06_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02900 NZ_JAVXZI010000002.1 Protein Homology CDS 115220 117052 . + 0 ID=cds-WP_063146680.1;Parent=gene-VMS06_RS02900;Dbxref=GenBank:WP_063146680.1;Name=WP_063146680.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461275.1;locus_tag=VMS06_RS02900;product=SLC13 family permease;protein_id=WP_063146680.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 117135 117734 . - . ID=gene-VMS06_RS02905;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=VMS06_RS02905 NZ_JAVXZI010000002.1 Protein Homology CDS 117135 117734 . - 0 ID=cds-WP_022648832.1;Parent=gene-VMS06_RS02905;Dbxref=GenBank:WP_022648832.1;Name=WP_022648832.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007699992.1;locus_tag=VMS06_RS02905;product=5'-deoxynucleotidase;protein_id=WP_022648832.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 117852 119066 . - . ID=gene-VMS06_RS02910;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=VMS06_RS02910 NZ_JAVXZI010000002.1 Protein Homology CDS 117852 119066 . - 0 ID=cds-WP_022648831.1;Parent=gene-VMS06_RS02910;Dbxref=GenBank:WP_022648831.1;Name=WP_022648831.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=VMS06_RS02910;product=alanine transaminase AlaA;protein_id=WP_022648831.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 120003 120941 . + . ID=gene-VMS06_RS02915;Name=lrhA;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=VMS06_RS02915 NZ_JAVXZI010000002.1 Protein Homology CDS 120003 120941 . + 0 ID=cds-WP_032622483.1;Parent=gene-VMS06_RS02915;Dbxref=GenBank:WP_032622483.1;Name=WP_032622483.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lrhA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311200.1;locus_tag=VMS06_RS02915;product=transcriptional regulator LrhA;protein_id=WP_032622483.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 121573 122013 . + . ID=gene-VMS06_RS02920;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=VMS06_RS02920 NZ_JAVXZI010000002.1 Protein Homology CDS 121573 122013 . + 0 ID=cds-WP_003861475.1;Parent=gene-VMS06_RS02920;Dbxref=GenBank:WP_003861475.1;Name=WP_003861475.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461270.1;locus_tag=VMS06_RS02920;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_003861475.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 122029 122703 . + . ID=gene-VMS06_RS02925;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=VMS06_RS02925 NZ_JAVXZI010000002.1 Protein Homology CDS 122029 122703 . + 0 ID=cds-WP_003861482.1;Parent=gene-VMS06_RS02925;Dbxref=GenBank:WP_003861482.1;Name=WP_003861482.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228044.1;locus_tag=VMS06_RS02925;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_003861482.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 122793 124595 . + . ID=gene-VMS06_RS02930;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=VMS06_RS02930 NZ_JAVXZI010000002.1 Protein Homology CDS 122793 124595 . + 0 ID=cds-WP_003861484.1;Parent=gene-VMS06_RS02930;Dbxref=GenBank:WP_003861484.1;Name=WP_003861484.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708168.1;locus_tag=VMS06_RS02930;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_003861484.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 124598 125098 . + . ID=gene-VMS06_RS02935;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=VMS06_RS02935 NZ_JAVXZI010000002.1 Protein Homology CDS 124598 125098 . + 0 ID=cds-WP_063147688.1;Parent=gene-VMS06_RS02935;Dbxref=GenBank:WP_063147688.1;Name=WP_063147688.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228042.1;locus_tag=VMS06_RS02935;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_063147688.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 125095 126432 . + . ID=gene-VMS06_RS02940;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=VMS06_RS02940 NZ_JAVXZI010000002.1 Protein Homology CDS 125095 126432 . + 0 ID=cds-WP_006811381.1;Parent=gene-VMS06_RS02940;Dbxref=GenBank:WP_006811381.1;Name=WP_006811381.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228041.1;locus_tag=VMS06_RS02940;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_006811381.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 126487 129210 . + . ID=gene-VMS06_RS02945;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=VMS06_RS02945 NZ_JAVXZI010000002.1 Protein Homology CDS 126487 129210 . + 0 ID=cds-WP_023300626.1;Parent=gene-VMS06_RS02945;Dbxref=GenBank:WP_023300626.1;Name=WP_023300626.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572271.1;locus_tag=VMS06_RS02945;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_023300626.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 129207 130184 . + . ID=gene-VMS06_RS02950;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=VMS06_RS02950 NZ_JAVXZI010000002.1 Protein Homology CDS 129207 130184 . + 0 ID=cds-WP_022648828.1;Parent=gene-VMS06_RS02950;Dbxref=GenBank:WP_022648828.1;Name=WP_022648828.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170994.1;locus_tag=VMS06_RS02950;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_022648828.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 130199 130741 . + . ID=gene-VMS06_RS02955;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=VMS06_RS02955 NZ_JAVXZI010000002.1 Protein Homology CDS 130199 130741 . + 0 ID=cds-WP_003861491.1;Parent=gene-VMS06_RS02955;Dbxref=GenBank:WP_003861491.1;Name=WP_003861491.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=VMS06_RS02955;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_003861491.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 130752 131306 . + . ID=gene-VMS06_RS02960;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=VMS06_RS02960 NZ_JAVXZI010000002.1 Protein Homology CDS 130752 131306 . + 0 ID=cds-WP_006176507.1;Parent=gene-VMS06_RS02960;Dbxref=GenBank:WP_006176507.1;Name=WP_006176507.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311191.1;locus_tag=VMS06_RS02960;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_006176507.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 131303 131605 . + . ID=gene-VMS06_RS02965;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=VMS06_RS02965 NZ_JAVXZI010000002.1 Protein Homology CDS 131303 131605 . + 0 ID=cds-WP_006176506.1;Parent=gene-VMS06_RS02965;Dbxref=GenBank:WP_006176506.1;Name=WP_006176506.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=VMS06_RS02965;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_006176506.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 131602 133443 . + . ID=gene-VMS06_RS02970;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=VMS06_RS02970 NZ_JAVXZI010000002.1 Protein Homology CDS 131602 133443 . + 0 ID=cds-WP_023300625.1;Parent=gene-VMS06_RS02970;Dbxref=GenBank:WP_023300625.1;Name=WP_023300625.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=VMS06_RS02970;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_023300625.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 133604 135133 . + . ID=gene-VMS06_RS02975;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=VMS06_RS02975 NZ_JAVXZI010000002.1 Protein Homology CDS 133604 135133 . + 0 ID=cds-WP_023300624.1;Parent=gene-VMS06_RS02975;Dbxref=GenBank:WP_023300624.1;Name=WP_023300624.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=VMS06_RS02975;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_023300624.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 135140 136597 . + . ID=gene-VMS06_RS02980;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=VMS06_RS02980 NZ_JAVXZI010000002.1 Protein Homology CDS 135140 136597 . + 0 ID=cds-WP_046619075.1;Parent=gene-VMS06_RS02980;Dbxref=GenBank:WP_046619075.1;Name=WP_046619075.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228033.1;locus_tag=VMS06_RS02980;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_046619075.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 136697 137701 . - . ID=gene-VMS06_RS02985;Name=VMS06_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02985 NZ_JAVXZI010000002.1 Protein Homology CDS 136697 137701 . - 0 ID=cds-WP_023306639.1;Parent=gene-VMS06_RS02985;Dbxref=GenBank:WP_023306639.1;Name=WP_023306639.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176501.1;locus_tag=VMS06_RS02985;product=chemotaxis protein;protein_id=WP_023306639.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 137766 138683 . - . ID=gene-VMS06_RS02990;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=VMS06_RS02990 NZ_JAVXZI010000002.1 Protein Homology CDS 137766 138683 . - 0 ID=cds-WP_022648823.1;Parent=gene-VMS06_RS02990;Dbxref=GenBank:WP_022648823.1;Name=WP_022648823.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rbn;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416771.4;locus_tag=VMS06_RS02990;product=ribonuclease BN;protein_id=WP_022648823.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 138755 139219 . + . ID=gene-VMS06_RS02995;Name=VMS06_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS02995 NZ_JAVXZI010000002.1 Protein Homology CDS 138755 139219 . + 0 ID=cds-WP_023300622.1;Parent=gene-VMS06_RS02995;Dbxref=GenBank:WP_023300622.1;Name=WP_023300622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859462.1;locus_tag=VMS06_RS02995;product=GNAT family N-acetyltransferase;protein_id=WP_023300622.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 139270 139575 . + . ID=gene-VMS06_RS03000;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=VMS06_RS03000 NZ_JAVXZI010000002.1 Protein Homology CDS 139270 139575 . + 0 ID=cds-WP_022648821.1;Parent=gene-VMS06_RS03000;Dbxref=GenBank:WP_022648821.1;Name=WP_022648821.1;gbkey=CDS;gene=elaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311181.1;locus_tag=VMS06_RS03000;product=stress response protein ElaB;protein_id=WP_022648821.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 139662 140957 . + . ID=gene-VMS06_RS03005;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=VMS06_RS03005 NZ_JAVXZI010000002.1 Protein Homology CDS 139662 140957 . + 0 ID=cds-WP_063147689.1;Parent=gene-VMS06_RS03005;Dbxref=GenBank:WP_063147689.1;Name=WP_063147689.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383426.1;locus_tag=VMS06_RS03005;product=isochorismate synthase MenF;protein_id=WP_063147689.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 141046 142716 . + . ID=gene-VMS06_RS03010;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=VMS06_RS03010 NZ_JAVXZI010000002.1 Protein Homology CDS 141046 142716 . + 0 ID=cds-WP_063147690.1;Parent=gene-VMS06_RS03010;Dbxref=GenBank:WP_063147690.1;Name=WP_063147690.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461251.1;locus_tag=VMS06_RS03010;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_063147690.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 142713 143489 . + . ID=gene-VMS06_RS03015;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=VMS06_RS03015 NZ_JAVXZI010000002.1 Protein Homology CDS 142713 143489 . + 0 ID=cds-WP_063147691.1;Parent=gene-VMS06_RS03015;Dbxref=GenBank:WP_063147691.1;Name=WP_063147691.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383424.1;locus_tag=VMS06_RS03015;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_063147691.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 143486 144343 . + . ID=gene-VMS06_RS03020;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=VMS06_RS03020 NZ_JAVXZI010000002.1 Protein Homology CDS 143486 144343 . + 0 ID=cds-WP_014832749.1;Parent=gene-VMS06_RS03020;Dbxref=GenBank:WP_014832749.1;Name=WP_014832749.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228027.1;locus_tag=VMS06_RS03020;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_014832749.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 144343 145308 . + . ID=gene-VMS06_RS03025;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=VMS06_RS03025 NZ_JAVXZI010000002.1 Protein Homology CDS 144343 145308 . + 0 ID=cds-WP_058677678.1;Parent=gene-VMS06_RS03025;Dbxref=GenBank:WP_058677678.1;Name=WP_058677678.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383423.1;locus_tag=VMS06_RS03025;product=o-succinylbenzoate synthase;protein_id=WP_058677678.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 145305 146666 . + . ID=gene-VMS06_RS03030;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=VMS06_RS03030 NZ_JAVXZI010000002.1 Protein Homology CDS 145305 146666 . + 0 ID=cds-WP_063147692.1;Parent=gene-VMS06_RS03030;Dbxref=GenBank:WP_063147692.1;Name=WP_063147692.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693011.1;locus_tag=VMS06_RS03030;product=o-succinylbenzoate--CoA ligase;protein_id=WP_063147692.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 146667 148181 . - . ID=gene-VMS06_RS03035;Name=VMS06_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03035 NZ_JAVXZI010000002.1 Protein Homology CDS 146667 148181 . - 0 ID=cds-WP_023300617.1;Parent=gene-VMS06_RS03035;Dbxref=GenBank:WP_023300617.1;Name=WP_023300617.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461714.1;locus_tag=VMS06_RS03035;product=tripartite tricarboxylate transporter permease;protein_id=WP_023300617.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 148193 148624 . - . ID=gene-VMS06_RS03040;Name=VMS06_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03040 NZ_JAVXZI010000002.1 Protein Homology CDS 148193 148624 . - 0 ID=cds-WP_022648813.1;Parent=gene-VMS06_RS03040;Dbxref=GenBank:WP_022648813.1;Name=WP_022648813.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001283758.1;locus_tag=VMS06_RS03040;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_022648813.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 148636 149616 . - . ID=gene-VMS06_RS03045;Name=VMS06_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03045 NZ_JAVXZI010000002.1 Protein Homology CDS 148636 149616 . - 0 ID=cds-WP_022648812.1;Parent=gene-VMS06_RS03045;Dbxref=GenBank:WP_022648812.1;Name=WP_022648812.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461712.1;locus_tag=VMS06_RS03045;product=Bug family tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_022648812.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 149769 150443 . + . ID=gene-VMS06_RS03050;Name=tctD;gbkey=Gene;gene=tctD;gene_biotype=protein_coding;locus_tag=VMS06_RS03050 NZ_JAVXZI010000002.1 Protein Homology CDS 149769 150443 . + 0 ID=cds-WP_046619087.1;Parent=gene-VMS06_RS03050;Dbxref=GenBank:WP_046619087.1;Name=WP_046619087.1;gbkey=CDS;gene=tctD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461711.1;locus_tag=VMS06_RS03050;product=transcriptional regulator TctD;protein_id=WP_046619087.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 150430 151839 . + . ID=gene-VMS06_RS03055;Name=VMS06_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03055 NZ_JAVXZI010000002.1 Protein Homology CDS 150430 151839 . + 0 ID=cds-WP_063147693.1;Parent=gene-VMS06_RS03055;Dbxref=GenBank:WP_063147693.1;Name=WP_063147693.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572281.1;locus_tag=VMS06_RS03055;product=sensor histidine kinase;protein_id=WP_063147693.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 151969 152508 . + . ID=gene-VMS06_RS03060;Name=VMS06_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03060 NZ_JAVXZI010000002.1 Protein Homology CDS 151969 152508 . + 0 ID=cds-WP_022648809.1;Parent=gene-VMS06_RS03060;Dbxref=GenBank:WP_022648809.1;Name=WP_022648809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004852777.1;locus_tag=VMS06_RS03060;product=YfaZ family outer membrane protein;protein_id=WP_022648809.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 152603 153802 . + . ID=gene-VMS06_RS03065;Name=VMS06_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03065 NZ_JAVXZI010000002.1 Protein Homology CDS 152603 153802 . + 0 ID=cds-WP_023300615.1;Parent=gene-VMS06_RS03065;Dbxref=GenBank:WP_023300615.1;Name=WP_023300615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383418.1;locus_tag=VMS06_RS03065;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_023300615.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 153834 155024 . - . ID=gene-VMS06_RS03070;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=VMS06_RS03070 NZ_JAVXZI010000002.1 Protein Homology CDS 153834 155024 . - 0 ID=cds-WP_063147694.1;Parent=gene-VMS06_RS03070;Dbxref=GenBank:WP_063147694.1;Name=WP_063147694.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859431.1;locus_tag=VMS06_RS03070;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_063147694.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 155021 156238 . - . ID=gene-VMS06_RS03075;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=VMS06_RS03075 NZ_JAVXZI010000002.1 Protein Homology CDS 155021 156238 . - 0 ID=cds-WP_323630609.1;Parent=gene-VMS06_RS03075;Dbxref=GenBank:WP_323630609.1;Name=WP_323630609.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131516.1;locus_tag=VMS06_RS03075;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_323630609.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 156228 157856 . - . ID=gene-VMS06_RS03080;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=VMS06_RS03080 NZ_JAVXZI010000002.1 Protein Homology CDS 156228 157856 . - 0 ID=cds-WP_063147696.1;Parent=gene-VMS06_RS03080;Dbxref=GenBank:WP_063147696.1;Name=WP_063147696.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859425.1;locus_tag=VMS06_RS03080;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_063147696.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 158107 159459 . + . ID=gene-VMS06_RS03085;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=VMS06_RS03085 NZ_JAVXZI010000002.1 Protein Homology CDS 158107 159459 . + 0 ID=cds-WP_063147697.1;Parent=gene-VMS06_RS03085;Dbxref=GenBank:WP_063147697.1;Name=WP_063147697.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883160.1;locus_tag=VMS06_RS03085;product=glycerol-3-phosphate transporter;protein_id=WP_063147697.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 159471 160529 . + . ID=gene-VMS06_RS03090;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=VMS06_RS03090 NZ_JAVXZI010000002.1 Protein Homology CDS 159471 160529 . + 0 ID=cds-WP_063147698.1;Parent=gene-VMS06_RS03090;Dbxref=GenBank:WP_063147698.1;Name=WP_063147698.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071082.1;locus_tag=VMS06_RS03090;product=glycerophosphodiester phosphodiesterase;protein_id=WP_063147698.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 160691 160945 . - . ID=gene-VMS06_RS03095;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=VMS06_RS03095 NZ_JAVXZI010000002.1 Protein Homology CDS 160691 160945 . - 0 ID=cds-WP_003859419.1;Parent=gene-VMS06_RS03095;Dbxref=GenBank:WP_003859419.1;Name=WP_003859419.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461221.1;locus_tag=VMS06_RS03095;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_003859419.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 160945 162075 . - . ID=gene-VMS06_RS03100;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=VMS06_RS03100 NZ_JAVXZI010000002.1 Protein Homology CDS 160945 162075 . - 0 ID=cds-WP_023306627.1;Parent=gene-VMS06_RS03100;Dbxref=GenBank:WP_023306627.1;Name=WP_023306627.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=VMS06_RS03100;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_023306627.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 162184 164469 . - . ID=gene-VMS06_RS03105;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=VMS06_RS03105 NZ_JAVXZI010000002.1 Protein Homology CDS 162184 164469 . - 0 ID=cds-WP_023300610.1;Parent=gene-VMS06_RS03105;Dbxref=GenBank:WP_023300610.1;Name=WP_023300610.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=VMS06_RS03105;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_023300610.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 164819 165547 . - . ID=gene-VMS06_RS03110;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=VMS06_RS03110 NZ_JAVXZI010000002.1 Protein Homology CDS 164819 165547 . - 0 ID=cds-WP_045620901.1;Parent=gene-VMS06_RS03110;Dbxref=GenBank:WP_045620901.1;Name=WP_045620901.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959798.1;locus_tag=VMS06_RS03110;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_045620901.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 165694 168330 . + . ID=gene-VMS06_RS03115;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=VMS06_RS03115 NZ_JAVXZI010000002.1 Protein Homology CDS 165694 168330 . + 0 ID=cds-WP_023300608.1;Parent=gene-VMS06_RS03115;Dbxref=GenBank:WP_023300608.1;Name=WP_023300608.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461214.1;locus_tag=VMS06_RS03115;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_023300608.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 168465 171311 . + . ID=gene-VMS06_RS03120;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=VMS06_RS03120 NZ_JAVXZI010000002.1 Protein Homology CDS 168465 171311 . + 0 ID=cds-WP_063147699.1;Parent=gene-VMS06_RS03120;Dbxref=GenBank:WP_063147699.1;Name=WP_063147699.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003845133.1;locus_tag=VMS06_RS03120;product=two-component system sensor histidine kinase RcsC;protein_id=WP_063147699.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 171423 172073 . - . ID=gene-VMS06_RS03125;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=VMS06_RS03125 NZ_JAVXZI010000002.1 Protein Homology CDS 171423 172073 . - 0 ID=cds-WP_003859405.1;Parent=gene-VMS06_RS03125;Dbxref=GenBank:WP_003859405.1;Name=WP_003859405.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311133.1;locus_tag=VMS06_RS03125;product=response regulator transcription factor RcsB;protein_id=WP_003859405.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 172090 174762 . - . ID=gene-VMS06_RS03130;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=VMS06_RS03130 NZ_JAVXZI010000002.1 Protein Homology CDS 172090 174762 . - 0 ID=cds-WP_023300606.1;Parent=gene-VMS06_RS03130;Dbxref=GenBank:WP_023300606.1;Name=WP_023300606.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461211.1;locus_tag=VMS06_RS03130;product=phosphotransferase RcsD;protein_id=WP_023300606.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 175509 176600 . + . ID=gene-VMS06_RS03135;Name=VMS06_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03135 NZ_JAVXZI010000002.1 Protein Homology CDS 175509 176600 . + 0 ID=cds-WP_048966266.1;Parent=gene-VMS06_RS03135;Dbxref=GenBank:WP_048966266.1;Name=WP_048966266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311131.1;locus_tag=VMS06_RS03135;product=porin OmpC;protein_id=WP_048966266.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 176714 177769 . + . ID=gene-VMS06_RS03140;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=VMS06_RS03140 NZ_JAVXZI010000002.1 Protein Homology CDS 176714 177769 . + 0 ID=cds-WP_023300605.1;Parent=gene-VMS06_RS03140;Dbxref=GenBank:WP_023300605.1;Name=WP_023300605.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228000.1;locus_tag=VMS06_RS03140;product=FAD:protein FMN transferase ApbE;protein_id=WP_023300605.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 177842 178900 . + . ID=gene-VMS06_RS03145;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=VMS06_RS03145 NZ_JAVXZI010000002.1 Protein Homology CDS 177842 178900 . + 0 ID=cds-WP_023300604.1;Parent=gene-VMS06_RS03145;Dbxref=GenBank:WP_023300604.1;Name=WP_023300604.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572291.1;locus_tag=VMS06_RS03145;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_023300604.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 178900 179550 . + . ID=gene-VMS06_RS03150;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=VMS06_RS03150 NZ_JAVXZI010000002.1 Protein Homology CDS 178900 179550 . + 0 ID=cds-WP_023300603.1;Parent=gene-VMS06_RS03150;Dbxref=GenBank:WP_023300603.1;Name=WP_023300603.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859395.1;locus_tag=VMS06_RS03150;product=DNA oxidative demethylase AlkB;protein_id=WP_023300603.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 179627 181270 . + . ID=gene-VMS06_RS03155;Name=VMS06_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03155 NZ_JAVXZI010000002.1 Protein Homology CDS 179627 181270 . + 0 ID=cds-WP_003859392.1;Parent=gene-VMS06_RS03155;Dbxref=GenBank:WP_003859392.1;Name=WP_003859392.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416715.1;locus_tag=VMS06_RS03155;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_003859392.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 181411 182847 . + . ID=gene-VMS06_RS03160;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=VMS06_RS03160 NZ_JAVXZI010000002.1 Protein Homology CDS 181411 182847 . + 0 ID=cds-WP_006811337.1;Parent=gene-VMS06_RS03160;Dbxref=GenBank:WP_006811337.1;Name=WP_006811337.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500966.1;locus_tag=VMS06_RS03160;product=magnesium transporter;protein_id=WP_006811337.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 182810 184105 . - . ID=gene-VMS06_RS03165;Name=VMS06_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03165 NZ_JAVXZI010000002.1 Protein Homology CDS 182810 184105 . - 0 ID=cds-WP_063147735.1;Parent=gene-VMS06_RS03165;Dbxref=GenBank:WP_063147735.1;Name=WP_063147735.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433440.1;locus_tag=VMS06_RS03165;product=SulP family inorganic anion transporter;protein_id=WP_063147735.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 184293 185942 . + . ID=gene-VMS06_RS03170;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=VMS06_RS03170 NZ_JAVXZI010000002.1 Protein Homology CDS 184293 185942 . + 0 ID=cds-WP_032622479.1;Parent=gene-VMS06_RS03170;Dbxref=GenBank:WP_032622479.1;Name=WP_032622479.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311126.1;locus_tag=VMS06_RS03170;product=malate dehydrogenase (quinone);protein_id=WP_032622479.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 186077 186586 . - . ID=gene-VMS06_RS03175;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=VMS06_RS03175 NZ_JAVXZI010000002.1 Protein Homology CDS 186077 186586 . - 0 ID=cds-WP_032622478.1;Parent=gene-VMS06_RS03175;Dbxref=GenBank:WP_032622478.1;Name=WP_032622478.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811333.1;locus_tag=VMS06_RS03175;product=serine protease inhibitor ecotin;protein_id=WP_032622478.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 186789 187049 . + . ID=gene-VMS06_RS03180;Name=VMS06_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03180 NZ_JAVXZI010000002.1 Protein Homology CDS 186789 187049 . + 0 ID=cds-WP_006811332.1;Parent=gene-VMS06_RS03180;Dbxref=GenBank:WP_006811332.1;Name=WP_006811332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071065.1;locus_tag=VMS06_RS03180;product=DUF2534 family protein;protein_id=WP_006811332.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 187116 187192 . - . ID=gene-VMS06_RS03185;Name=VMS06_RS03185;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS03185 NZ_JAVXZI010000002.1 tRNAscan-SE tRNA 187116 187192 . - . ID=rna-VMS06_RS03185;Parent=gene-VMS06_RS03185;anticodon=(pos:complement(187156..187158));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS03185;product=tRNA-Pro NZ_JAVXZI010000002.1 tRNAscan-SE exon 187116 187192 . - . ID=exon-VMS06_RS03185-1;Parent=rna-VMS06_RS03185;anticodon=(pos:complement(187156..187158));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS03185;product=tRNA-Pro NZ_JAVXZI010000002.1 RefSeq gene 187266 189026 . - . ID=gene-VMS06_RS03190;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=VMS06_RS03190 NZ_JAVXZI010000002.1 Protein Homology CDS 187266 189026 . - 0 ID=cds-WP_022648735.1;Parent=gene-VMS06_RS03190;Dbxref=GenBank:WP_022648735.1;Name=WP_022648735.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=VMS06_RS03190;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_022648735.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 189046 189273 . - . ID=gene-VMS06_RS03195;Name=VMS06_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03195 NZ_JAVXZI010000002.1 Protein Homology CDS 189046 189273 . - 0 ID=cds-WP_001135586.1;Parent=gene-VMS06_RS03195;Dbxref=GenBank:WP_001135586.1;Name=WP_001135586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=VMS06_RS03195;product=YejL family protein;protein_id=WP_001135586.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 189408 190415 . + . ID=gene-VMS06_RS03200;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=VMS06_RS03200 NZ_JAVXZI010000002.1 Protein Homology CDS 189408 190415 . + 0 ID=cds-WP_017693031.1;Parent=gene-VMS06_RS03200;Dbxref=GenBank:WP_017693031.1;Name=WP_017693031.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461170.1;locus_tag=VMS06_RS03200;product=nucleoid-associated protein YejK;protein_id=WP_017693031.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 190467 190751 . - . ID=gene-VMS06_RS03205;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=VMS06_RS03205 NZ_JAVXZI010000002.1 Protein Homology CDS 190467 190751 . - 0 ID=cds-WP_022648733.1;Parent=gene-VMS06_RS03205;Dbxref=GenBank:WP_022648733.1;Name=WP_022648733.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227984.1;locus_tag=VMS06_RS03205;product=50S ribosomal protein L25;protein_id=WP_022648733.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 190877 192637 . - . ID=gene-VMS06_RS03210;Name=radD;gbkey=Gene;gene=radD;gene_biotype=protein_coding;gene_synonym=yejH;locus_tag=VMS06_RS03210 NZ_JAVXZI010000002.1 Protein Homology CDS 190877 192637 . - 0 ID=cds-WP_063147700.1;Parent=gene-VMS06_RS03210;Dbxref=GenBank:WP_063147700.1;Name=WP_063147700.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radD;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311103.1;locus_tag=VMS06_RS03210;product=DNA repair helicase RadD;protein_id=WP_063147700.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 192789 193496 . + . ID=gene-VMS06_RS03215;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=VMS06_RS03215 NZ_JAVXZI010000002.1 Protein Homology CDS 192789 193496 . + 0 ID=cds-WP_063147701.1;Parent=gene-VMS06_RS03215;Dbxref=GenBank:WP_063147701.1;Name=WP_063147701.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007890788.1;locus_tag=VMS06_RS03215;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_063147701.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 193512 194711 . + . ID=gene-VMS06_RS03220;Name=VMS06_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03220 NZ_JAVXZI010000002.1 Protein Homology CDS 193512 194711 . + 0 ID=cds-WP_063147702.1;Parent=gene-VMS06_RS03220;Dbxref=GenBank:WP_063147702.1;Name=WP_063147702.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859373.1;locus_tag=VMS06_RS03220;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_063147702.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 194988 195332 . + . ID=gene-VMS06_RS03225;Name=VMS06_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03225 NZ_JAVXZI010000002.1 Protein Homology CDS 194988 195332 . + 0 ID=cds-WP_003859372.1;Parent=gene-VMS06_RS03225;Dbxref=GenBank:WP_003859372.1;Name=WP_003859372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227980.1;locus_tag=VMS06_RS03225;product=YejG family protein;protein_id=WP_003859372.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 195336 196925 . - . ID=gene-VMS06_RS03230;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=VMS06_RS03230 NZ_JAVXZI010000002.1 Protein Homology CDS 195336 196925 . - 0 ID=cds-WP_063147703.1;Parent=gene-VMS06_RS03230;Dbxref=GenBank:WP_063147703.1;Name=WP_063147703.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859371.1;locus_tag=VMS06_RS03230;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_063147703.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 196927 197952 . - . ID=gene-VMS06_RS03235;Name=VMS06_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03235 NZ_JAVXZI010000002.1 Protein Homology CDS 196927 197952 . - 0 ID=cds-WP_045308660.1;Parent=gene-VMS06_RS03235;Dbxref=GenBank:WP_045308660.1;Name=WP_045308660.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416684.1;locus_tag=VMS06_RS03235;product=microcin C ABC transporter permease;protein_id=WP_045308660.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 197952 199046 . - . ID=gene-VMS06_RS03240;Name=VMS06_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03240 NZ_JAVXZI010000002.1 Protein Homology CDS 197952 199046 . - 0 ID=cds-WP_003859369.1;Parent=gene-VMS06_RS03240;Dbxref=GenBank:WP_003859369.1;Name=WP_003859369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311097.1;locus_tag=VMS06_RS03240;product=microcin C ABC transporter permease YejB;protein_id=WP_003859369.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 199056 200861 . - . ID=gene-VMS06_RS03245;Name=VMS06_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03245 NZ_JAVXZI010000002.1 Protein Homology CDS 199056 200861 . - 0 ID=cds-WP_063147704.1;Parent=gene-VMS06_RS03245;Dbxref=GenBank:WP_063147704.1;Name=WP_063147704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461160.1;locus_tag=VMS06_RS03245;product=extracellular solute-binding protein;protein_id=WP_063147704.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 200937 202490 . - . ID=gene-VMS06_RS03250;Name=VMS06_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03250 NZ_JAVXZI010000002.1 Protein Homology CDS 200937 202490 . - 0 ID=cds-WP_046619109.1;Parent=gene-VMS06_RS03250;Dbxref=GenBank:WP_046619109.1;Name=WP_046619109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811322.1;locus_tag=VMS06_RS03250;product=cyclic di-GMP phosphodiesterase;protein_id=WP_046619109.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 202618 203187 . - . ID=gene-VMS06_RS03255;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=VMS06_RS03255 NZ_JAVXZI010000002.1 Protein Homology CDS 202618 203187 . - 0 ID=cds-WP_003859364.1;Parent=gene-VMS06_RS03255;Dbxref=GenBank:WP_003859364.1;Name=WP_003859364.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311094.1;locus_tag=VMS06_RS03255;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_003859364.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 203612 204316 . - . ID=gene-VMS06_RS03260;Name=VMS06_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03260 NZ_JAVXZI010000002.1 Protein Homology CDS 203612 204316 . - 0 ID=cds-WP_046619110.1;Parent=gene-VMS06_RS03260;Dbxref=GenBank:WP_046619110.1;Name=WP_046619110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859363.1;locus_tag=VMS06_RS03260;product=phosphatase PAP2 family protein;protein_id=WP_046619110.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 204350 205336 . - . ID=gene-VMS06_RS03265;Name=VMS06_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03265 NZ_JAVXZI010000002.1 Protein Homology CDS 204350 205336 . - 0 ID=cds-WP_063147705.1;Parent=gene-VMS06_RS03265;Dbxref=GenBank:WP_063147705.1;Name=WP_063147705.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170928.1;locus_tag=VMS06_RS03265;product=CobW family GTP-binding protein;protein_id=WP_063147705.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 205460 206926 . - . ID=gene-VMS06_RS03270;Name=VMS06_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03270 NZ_JAVXZI010000002.1 Protein Homology CDS 205460 206926 . - 0 ID=cds-WP_063147706.1;Parent=gene-VMS06_RS03270;Dbxref=GenBank:WP_063147706.1;Name=WP_063147706.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004017015.1;locus_tag=VMS06_RS03270;product=mannitol dehydrogenase family protein;protein_id=WP_063147706.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 207132 208322 . + . ID=gene-VMS06_RS03275;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=VMS06_RS03275 NZ_JAVXZI010000002.1 Protein Homology CDS 207132 208322 . + 0 ID=cds-WP_023306613.1;Parent=gene-VMS06_RS03275;Dbxref=GenBank:WP_023306613.1;Name=WP_023306613.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227970.1;locus_tag=VMS06_RS03275;product=mannonate dehydratase;protein_id=WP_023306613.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 208439 209011 . - . ID=gene-VMS06_RS03280;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=VMS06_RS03280 NZ_JAVXZI010000002.1 Protein Homology CDS 208439 209011 . - 0 ID=cds-WP_003859355.1;Parent=gene-VMS06_RS03280;Dbxref=GenBank:WP_003859355.1;Name=WP_003859355.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=VMS06_RS03280;product=elongation factor P-like protein YeiP;protein_id=WP_003859355.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 209176 209430 . + . ID=gene-VMS06_RS03285;Name=VMS06_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03285 NZ_JAVXZI010000002.1 Protein Homology CDS 209176 209430 . + 0 ID=cds-WP_048966258.1;Parent=gene-VMS06_RS03285;Dbxref=GenBank:WP_048966258.1;Name=WP_048966258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859353.1;locus_tag=VMS06_RS03285;product=YkgJ family cysteine cluster protein;protein_id=WP_048966258.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 209427 210608 . - . ID=gene-VMS06_RS03290;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=VMS06_RS03290 NZ_JAVXZI010000002.1 Protein Homology CDS 209427 210608 . - 0 ID=cds-WP_038416423.1;Parent=gene-VMS06_RS03290;Dbxref=GenBank:WP_038416423.1;Name=WP_038416423.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461152.1;locus_tag=VMS06_RS03290;product=sugar efflux transporter SetB;protein_id=WP_038416423.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 210712 210891 . - . ID=gene-VMS06_RS03295;Name=VMS06_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03295 NZ_JAVXZI010000002.1 GeneMarkS-2+ CDS 210712 210891 . - 0 ID=cds-WP_139152663.1;Parent=gene-VMS06_RS03295;Dbxref=GenBank:WP_139152663.1;Name=WP_139152663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS03295;product=hypothetical protein;protein_id=WP_139152663.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 210967 212097 . + . ID=gene-VMS06_RS03300;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=VMS06_RS03300 NZ_JAVXZI010000002.1 Protein Homology CDS 210967 212097 . + 0 ID=cds-WP_022648705.1;Parent=gene-VMS06_RS03300;Dbxref=GenBank:WP_022648705.1;Name=WP_022648705.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461151.1;locus_tag=VMS06_RS03300;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_022648705.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 212097 213035 . + . ID=gene-VMS06_RS03305;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=VMS06_RS03305 NZ_JAVXZI010000002.1 Protein Homology CDS 212097 213035 . + 0 ID=cds-WP_006811313.1;Parent=gene-VMS06_RS03305;Dbxref=GenBank:WP_006811313.1;Name=WP_006811313.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227964.1;locus_tag=VMS06_RS03305;product=1-phosphofructokinase;protein_id=WP_006811313.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 213052 214737 . + . ID=gene-VMS06_RS03310;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=VMS06_RS03310 NZ_JAVXZI010000002.1 Protein Homology CDS 213052 214737 . + 0 ID=cds-WP_063147707.1;Parent=gene-VMS06_RS03310;Dbxref=GenBank:WP_063147707.1;Name=WP_063147707.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461149.1;locus_tag=VMS06_RS03310;product=PTS fructose transporter subunit IIBC;protein_id=WP_063147707.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 214812 215669 . - . ID=gene-VMS06_RS03315;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=VMS06_RS03315 NZ_JAVXZI010000002.1 Protein Homology CDS 214812 215669 . - 0 ID=cds-WP_032623904.1;Parent=gene-VMS06_RS03315;Dbxref=GenBank:WP_032623904.1;Name=WP_032623904.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311078.1;locus_tag=VMS06_RS03315;product=deoxyribonuclease IV;protein_id=WP_032623904.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 215734 216780 . - . ID=gene-VMS06_RS03320;Name=VMS06_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03320 NZ_JAVXZI010000002.1 Protein Homology CDS 215734 216780 . - 0 ID=cds-WP_023306611.1;Parent=gene-VMS06_RS03320;Dbxref=GenBank:WP_023306611.1;Name=WP_023306611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461147.1;locus_tag=VMS06_RS03320;product=YeiH family protein;protein_id=WP_023306611.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 216878 217744 . + . ID=gene-VMS06_RS03325;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=VMS06_RS03325 NZ_JAVXZI010000002.1 Protein Homology CDS 216878 217744 . + 0 ID=cds-WP_003859337.1;Parent=gene-VMS06_RS03325;Dbxref=GenBank:WP_003859337.1;Name=WP_003859337.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433519.1;locus_tag=VMS06_RS03325;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_003859337.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 217915 219384 . + . ID=gene-VMS06_RS03330;Name=VMS06_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03330 NZ_JAVXZI010000002.1 Protein Homology CDS 217915 219384 . + 0 ID=cds-WP_022648700.1;Parent=gene-VMS06_RS03330;Dbxref=GenBank:WP_022648700.1;Name=WP_022648700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000253273.1;locus_tag=VMS06_RS03330;product=amino acid permease;protein_id=WP_022648700.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 219439 221424 . - . ID=gene-VMS06_RS03335;Name=VMS06_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03335 NZ_JAVXZI010000002.1 Protein Homology CDS 219439 221424 . - 0 ID=cds-WP_023306610.1;Parent=gene-VMS06_RS03335;Dbxref=GenBank:WP_023306610.1;Name=WP_023306610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156980.1;locus_tag=VMS06_RS03335;product=ligand-gated channel protein;protein_id=WP_023306610.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 221686 222513 . - . ID=gene-VMS06_RS03340;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=VMS06_RS03340 NZ_JAVXZI010000002.1 Protein Homology CDS 221686 222513 . - 0 ID=cds-WP_038416422.1;Parent=gene-VMS06_RS03340;Dbxref=GenBank:WP_038416422.1;Name=WP_038416422.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804024.1;locus_tag=VMS06_RS03340;product=S-formylglutathione hydrolase;protein_id=WP_038416422.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 222651 223799 . + . ID=gene-VMS06_RS03345;Name=VMS06_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03345 NZ_JAVXZI010000002.1 Protein Homology CDS 222651 223799 . + 0 ID=cds-WP_022648697.1;Parent=gene-VMS06_RS03345;Dbxref=GenBank:WP_022648697.1;Name=WP_022648697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811305.1;locus_tag=VMS06_RS03345;product=YbfB/YjiJ family MFS transporter;protein_id=WP_022648697.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 223902 224570 . + . ID=gene-VMS06_RS03350;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=VMS06_RS03350 NZ_JAVXZI010000002.1 Protein Homology CDS 223902 224570 . + 0 ID=cds-WP_017383384.1;Parent=gene-VMS06_RS03350;Dbxref=GenBank:WP_017383384.1;Name=WP_017383384.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311072.1;locus_tag=VMS06_RS03350;product=GTP cyclohydrolase I FolE;protein_id=WP_017383384.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 224589 225746 . + . ID=gene-VMS06_RS03355;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=VMS06_RS03355 NZ_JAVXZI010000002.1 Protein Homology CDS 224589 225746 . + 0 ID=cds-WP_046619122.1;Parent=gene-VMS06_RS03355;Dbxref=GenBank:WP_046619122.1;Name=WP_046619122.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311071.1;locus_tag=VMS06_RS03355;product=DUF418 domain-containing protein YeiB;protein_id=WP_046619122.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 225902 226924 . + . ID=gene-VMS06_RS03360;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=VMS06_RS03360 NZ_JAVXZI010000002.1 Protein Homology CDS 225902 226924 . + 0 ID=cds-WP_048966254.1;Parent=gene-VMS06_RS03360;Dbxref=GenBank:WP_048966254.1;Name=WP_048966254.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227952.1;locus_tag=VMS06_RS03360;product=HTH-type transcriptional regulator GalS;protein_id=WP_048966254.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 227220 228218 . + . ID=gene-VMS06_RS03365;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=VMS06_RS03365 NZ_JAVXZI010000002.1 Protein Homology CDS 227220 228218 . + 0 ID=cds-WP_022648695.1;Parent=gene-VMS06_RS03365;Dbxref=GenBank:WP_022648695.1;Name=WP_022648695.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=VMS06_RS03365;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_022648695.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 228298 229818 . + . ID=gene-VMS06_RS03370;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=VMS06_RS03370 NZ_JAVXZI010000002.1 Protein Homology CDS 228298 229818 . + 0 ID=cds-WP_003859320.1;Parent=gene-VMS06_RS03370;Dbxref=GenBank:WP_003859320.1;Name=WP_003859320.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=VMS06_RS03370;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_003859320.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 229834 230844 . + . ID=gene-VMS06_RS03375;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=VMS06_RS03375 NZ_JAVXZI010000002.1 Protein Homology CDS 229834 230844 . + 0 ID=cds-WP_022648694.1;Parent=gene-VMS06_RS03375;Dbxref=GenBank:WP_022648694.1;Name=WP_022648694.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=VMS06_RS03375;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_022648694.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 230972 231682 . - . ID=gene-VMS06_RS03380;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=VMS06_RS03380 NZ_JAVXZI010000002.1 Protein Homology CDS 230972 231682 . - 0 ID=cds-WP_022648693.1;Parent=gene-VMS06_RS03380;Dbxref=GenBank:WP_022648693.1;Name=WP_022648693.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383381.1;locus_tag=VMS06_RS03380;product=outer membrane permeability protein SanA;protein_id=WP_022648693.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 231810 232694 . - . ID=gene-VMS06_RS03385;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=VMS06_RS03385 NZ_JAVXZI010000002.1 Protein Homology CDS 231810 232694 . - 0 ID=cds-WP_022648692.1;Parent=gene-VMS06_RS03385;Dbxref=GenBank:WP_022648692.1;Name=WP_022648692.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416648.1;locus_tag=VMS06_RS03385;product=cytidine deaminase;protein_id=WP_022648692.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 232823 233518 . - . ID=gene-VMS06_RS03390;Name=VMS06_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03390 NZ_JAVXZI010000002.1 Protein Homology CDS 232823 233518 . - 0 ID=cds-WP_022648691.1;Parent=gene-VMS06_RS03390;Dbxref=GenBank:WP_022648691.1;Name=WP_022648691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416647.1;locus_tag=VMS06_RS03390;product=CidB/LrgB family autolysis modulator;protein_id=WP_022648691.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 233515 233910 . - . ID=gene-VMS06_RS03395;Name=VMS06_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03395 NZ_JAVXZI010000002.1 Protein Homology CDS 233515 233910 . - 0 ID=cds-WP_022648690.1;Parent=gene-VMS06_RS03395;Dbxref=GenBank:WP_022648690.1;Name=WP_022648690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461126.1;locus_tag=VMS06_RS03395;product=CidA/LrgA family protein;protein_id=WP_022648690.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 234079 235014 . + . ID=gene-VMS06_RS03400;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=VMS06_RS03400 NZ_JAVXZI010000002.1 Protein Homology CDS 234079 235014 . + 0 ID=cds-WP_023306604.1;Parent=gene-VMS06_RS03400;Dbxref=GenBank:WP_023306604.1;Name=WP_023306604.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811296.1;locus_tag=VMS06_RS03400;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_023306604.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 235060 235143 . - . ID=gene-VMS06_RS22955;Name=yohP;gbkey=Gene;gene=yohP;gene_biotype=protein_coding;locus_tag=VMS06_RS22955 NZ_JAVXZI010000002.1 Protein Homology CDS 235060 235143 . - 0 ID=cds-WP_015572324.1;Parent=gene-VMS06_RS22955;Dbxref=GenBank:WP_015572324.1;Name=WP_015572324.1;gbkey=CDS;gene=yohP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791249.1;locus_tag=VMS06_RS22955;product=small membrane protein YohP;protein_id=WP_015572324.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 235348 236766 . + . ID=gene-VMS06_RS03405;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=VMS06_RS03405 NZ_JAVXZI010000002.1 Protein Homology CDS 235348 236766 . + 0 ID=cds-WP_048965843.1;Parent=gene-VMS06_RS03405;Dbxref=GenBank:WP_048965843.1;Name=WP_048965843.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129191.1;locus_tag=VMS06_RS03405;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_048965843.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 236817 237581 . + . ID=gene-VMS06_RS03410;Name=VMS06_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03410 NZ_JAVXZI010000002.1 Protein Homology CDS 236817 237581 . + 0 ID=cds-WP_063147708.1;Parent=gene-VMS06_RS03410;Dbxref=GenBank:WP_063147708.1;Name=WP_063147708.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176404.1;locus_tag=VMS06_RS03410;product=SDR family oxidoreductase;protein_id=WP_063147708.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 237683 238255 . - . ID=gene-VMS06_RS03415;Name=VMS06_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03415 NZ_JAVXZI010000002.1 Protein Homology CDS 237683 238255 . - 0 ID=cds-WP_063147709.1;Parent=gene-VMS06_RS03415;Dbxref=GenBank:WP_063147709.1;Name=WP_063147709.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500905.1;locus_tag=VMS06_RS03415;product=DedA family protein;protein_id=WP_063147709.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 238413 239000 . + . ID=gene-VMS06_RS03420;Name=VMS06_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03420 NZ_JAVXZI010000002.1 Protein Homology CDS 238413 239000 . + 0 ID=cds-WP_003859296.1;Parent=gene-VMS06_RS03420;Dbxref=GenBank:WP_003859296.1;Name=WP_003859296.1;Ontology_term=GO:0016192,GO:0031267;gbkey=CDS;go_function=small GTPase binding|0031267||IEA;go_process=vesicle-mediated transport|0016192||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170891.1;locus_tag=VMS06_RS03420;product=Yip1 family protein;protein_id=WP_003859296.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 239168 240091 . + . ID=gene-VMS06_RS03425;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=VMS06_RS03425 NZ_JAVXZI010000002.1 Protein Homology CDS 239168 240091 . + 0 ID=cds-WP_063147710.1;Parent=gene-VMS06_RS03425;Dbxref=GenBank:WP_063147710.1;Name=WP_063147710.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416638.4;locus_tag=VMS06_RS03425;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_063147710.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 240197 240751 . - . ID=gene-VMS06_RS03430;Name=VMS06_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03430 NZ_JAVXZI010000002.1 Protein Homology CDS 240197 240751 . - 0 ID=cds-WP_022648685.1;Parent=gene-VMS06_RS03430;Dbxref=GenBank:WP_022648685.1;Name=WP_022648685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859289.1;locus_tag=VMS06_RS03430;product=GNAT family N-acetyltransferase;protein_id=WP_022648685.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 240854 242611 . - . ID=gene-VMS06_RS03435;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=VMS06_RS03435 NZ_JAVXZI010000002.1 Protein Homology CDS 240854 242611 . - 0 ID=cds-WP_038416416.1;Parent=gene-VMS06_RS03435;Dbxref=GenBank:WP_038416416.1;Name=WP_038416416.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693052.1;locus_tag=VMS06_RS03435;product=D-lactate dehydrogenase;protein_id=WP_038416416.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 242801 245098 . + . ID=gene-VMS06_RS03440;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=VMS06_RS03440 NZ_JAVXZI010000002.1 Protein Homology CDS 242801 245098 . + 0 ID=cds-WP_063146228.1;Parent=gene-VMS06_RS03440;Dbxref=GenBank:WP_063146228.1;Name=WP_063146228.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000871479.1;locus_tag=VMS06_RS03440;product=beta-glucosidase BglX;protein_id=WP_063146228.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 245235 246152 . + . ID=gene-VMS06_RS03445;Name=osmF;gbkey=Gene;gene=osmF;gene_biotype=protein_coding;locus_tag=VMS06_RS03445 NZ_JAVXZI010000002.1 Protein Homology CDS 245235 246152 . + 0 ID=cds-WP_022648682.1;Parent=gene-VMS06_RS03445;Dbxref=GenBank:WP_022648682.1;Name=WP_022648682.1;Ontology_term=GO:0031460,GO:0022857;gbkey=CDS;gene=osmF;go_function=transmembrane transporter activity|0022857||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020454365.1;locus_tag=VMS06_RS03445;product=glycine betaine ABC transporter substrate-binding protein OsmF;protein_id=WP_022648682.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 246165 247322 . + . ID=gene-VMS06_RS03450;Name=VMS06_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03450 NZ_JAVXZI010000002.1 Protein Homology CDS 246165 247322 . + 0 ID=cds-WP_063147711.1;Parent=gene-VMS06_RS03450;Dbxref=GenBank:WP_063147711.1;Name=WP_063147711.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883211.1;locus_tag=VMS06_RS03450;product=ABC transporter permease;protein_id=WP_063147711.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 247315 248265 . + . ID=gene-VMS06_RS03455;Name=VMS06_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03455 NZ_JAVXZI010000002.1 Protein Homology CDS 247315 248265 . + 0 ID=cds-WP_063147712.1;Parent=gene-VMS06_RS03455;Dbxref=GenBank:WP_063147712.1;Name=WP_063147712.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859280.1;locus_tag=VMS06_RS03455;product=ABC transporter ATP-binding protein;protein_id=WP_063147712.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 248249 248986 . + . ID=gene-VMS06_RS03460;Name=VMS06_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03460 NZ_JAVXZI010000002.1 Protein Homology CDS 248249 248986 . + 0 ID=cds-WP_063147713.1;Parent=gene-VMS06_RS03460;Dbxref=GenBank:WP_063147713.1;Name=WP_063147713.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070998.1;locus_tag=VMS06_RS03460;product=ABC transporter permease;protein_id=WP_063147713.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 248961 249074 . - . ID=gene-VMS06_RS03465;Name=VMS06_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03465 NZ_JAVXZI010000002.1 Protein Homology CDS 248961 249074 . - 0 ID=cds-WP_022648678.1;Parent=gene-VMS06_RS03465;Dbxref=GenBank:WP_022648678.1;Name=WP_022648678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227927.1;locus_tag=VMS06_RS03465;product=protein YohO;protein_id=WP_022648678.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 249144 249884 . - . ID=gene-VMS06_RS03470;Name=mlrA;gbkey=Gene;gene=mlrA;gene_biotype=protein_coding;locus_tag=VMS06_RS03470 NZ_JAVXZI010000002.1 Protein Homology CDS 249144 249884 . - 0 ID=cds-WP_022648677.1;Parent=gene-VMS06_RS03470;Dbxref=GenBank:WP_022648677.1;Name=WP_022648677.1;gbkey=CDS;gene=mlrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859273.1;locus_tag=VMS06_RS03470;product=HTH-type transcriptional regulator MlrA;protein_id=WP_022648677.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 250103 251788 . + . ID=gene-VMS06_RS03475;Name=VMS06_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03475 NZ_JAVXZI010000002.1 Protein Homology CDS 250103 251788 . + 0 ID=cds-WP_003859271.1;Parent=gene-VMS06_RS03475;Dbxref=GenBank:WP_003859271.1;Name=WP_003859271.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433619.1;locus_tag=VMS06_RS03475;product=sensor histidine kinase;protein_id=WP_003859271.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 251782 252501 . + . ID=gene-VMS06_RS03480;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=VMS06_RS03480 NZ_JAVXZI010000002.1 Protein Homology CDS 251782 252501 . + 0 ID=cds-WP_022648676.1;Parent=gene-VMS06_RS03480;Dbxref=GenBank:WP_022648676.1;Name=WP_022648676.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461103.1;locus_tag=VMS06_RS03480;product=two-component system response regulator BtsR;protein_id=WP_022648676.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 252548 253018 . + . ID=gene-VMS06_RS03485;Name=VMS06_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03485 NZ_JAVXZI010000002.1 Protein Homology CDS 252548 253018 . + 0 ID=cds-WP_015572337.1;Parent=gene-VMS06_RS03485;Dbxref=GenBank:WP_015572337.1;Name=WP_015572337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859267.1;locus_tag=VMS06_RS03485;product=YehS family protein;protein_id=WP_015572337.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 253127 255160 . - . ID=gene-VMS06_RS03490;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=VMS06_RS03490 NZ_JAVXZI010000002.1 Protein Homology CDS 253127 255160 . - 0 ID=cds-WP_023300575.1;Parent=gene-VMS06_RS03490;Dbxref=GenBank:WP_023300575.1;Name=WP_023300575.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310947.1;locus_tag=VMS06_RS03490;product=methionine--tRNA ligase;protein_id=WP_023300575.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 255298 256407 . + . ID=gene-VMS06_RS03495;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=VMS06_RS03495 NZ_JAVXZI010000002.1 Protein Homology CDS 255298 256407 . + 0 ID=cds-WP_023300574.1;Parent=gene-VMS06_RS03495;Dbxref=GenBank:WP_023300574.1;Name=WP_023300574.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310946.2;locus_tag=VMS06_RS03495;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_023300574.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 256497 256973 . - . ID=gene-VMS06_RS03500;Name=VMS06_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03500 NZ_JAVXZI010000002.1 Protein Homology CDS 256497 256973 . - 0 ID=cds-WP_032622520.1;Parent=gene-VMS06_RS03500;Dbxref=GenBank:WP_032622520.1;Name=WP_032622520.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572340.1;locus_tag=VMS06_RS03500;product=GNAT family N-acetyltransferase;protein_id=WP_032622520.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 256924 257256 . - . ID=gene-VMS06_RS03505;Name=VMS06_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03505 NZ_JAVXZI010000002.1 Protein Homology CDS 256924 257256 . - 0 ID=cds-WP_022648672.1;Parent=gene-VMS06_RS03505;Dbxref=GenBank:WP_022648672.1;Name=WP_022648672.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383366.1;locus_tag=VMS06_RS03505;product=RcnB family protein;protein_id=WP_022648672.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 257712 258842 . + . ID=gene-VMS06_RS03510;Name=VMS06_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03510 NZ_JAVXZI010000002.1 Protein Homology CDS 257712 258842 . + 0 ID=cds-WP_063147714.1;Parent=gene-VMS06_RS03510;Dbxref=GenBank:WP_063147714.1;Name=WP_063147714.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070989.1;locus_tag=VMS06_RS03510;product=polysaccharide export protein;protein_id=WP_063147714.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 258842 259291 . + . ID=gene-VMS06_RS03515;Name=VMS06_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03515 NZ_JAVXZI010000002.1 Protein Homology CDS 258842 259291 . + 0 ID=cds-WP_022648670.1;Parent=gene-VMS06_RS03515;Dbxref=GenBank:WP_022648670.1;Name=WP_022648670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859256.1;locus_tag=VMS06_RS03515;product=arsenate reductase/protein-tyrosine-phosphatase family protein;protein_id=WP_022648670.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 259291 261480 . + . ID=gene-VMS06_RS03520;Name=VMS06_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03520 NZ_JAVXZI010000002.1 Protein Homology CDS 259291 261480 . + 0 ID=cds-WP_058677655.1;Parent=gene-VMS06_RS03520;Dbxref=GenBank:WP_058677655.1;Name=WP_058677655.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383363.1;locus_tag=VMS06_RS03520;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_058677655.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 261533 262999 . - . ID=gene-VMS06_RS03525;Name=VMS06_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03525 NZ_JAVXZI010000002.1 Protein Homology CDS 261533 262999 . - 0 ID=cds-WP_063147715.1;Parent=gene-VMS06_RS03525;Dbxref=GenBank:WP_063147715.1;Name=WP_063147715.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883226.1;locus_tag=VMS06_RS03525;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_063147715.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 263018 264394 . - . ID=gene-VMS06_RS03530;Name=VMS06_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03530 NZ_JAVXZI010000002.1 Protein Homology CDS 263018 264394 . - 0 ID=cds-WP_032623920.1;Parent=gene-VMS06_RS03530;Dbxref=GenBank:WP_032623920.1;Name=WP_032623920.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227056.1;locus_tag=VMS06_RS03530;product=diaminobutyrate--2-oxoglutarate transaminase;protein_id=WP_032623920.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 264706 265149 . - . ID=gene-VMS06_RS03535;Name=VMS06_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03535 NZ_JAVXZI010000002.1 Protein Homology CDS 264706 265149 . - 0 ID=cds-WP_022648666.1;Parent=gene-VMS06_RS03535;Dbxref=GenBank:WP_022648666.1;Name=WP_022648666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859249.1;locus_tag=VMS06_RS03535;product=hypothetical protein;protein_id=WP_022648666.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 265356 266585 . - . ID=gene-VMS06_RS03540;Name=VMS06_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03540 NZ_JAVXZI010000002.1 Protein Homology CDS 265356 266585 . - 0 ID=cds-WP_063147716.1;Parent=gene-VMS06_RS03540;Dbxref=GenBank:WP_063147716.1;Name=WP_063147716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906590.1;locus_tag=VMS06_RS03540;product=YadA C-terminal domain-containing protein;protein_id=WP_063147716.1;transl_table=11 NZ_JAVXZI010000002.1 cmsearch riboswitch 267268 267364 . + . ID=id-NZ_JAVXZI010000002.1:267268..267364;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVXZI010000002.1 RefSeq gene 267400 268170 . + . ID=gene-VMS06_RS03545;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=VMS06_RS03545 NZ_JAVXZI010000002.1 Protein Homology CDS 267400 268170 . + 0 ID=cds-WP_063147717.1;Parent=gene-VMS06_RS03545;Dbxref=GenBank:WP_063147717.1;Name=WP_063147717.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001182177.1;locus_tag=VMS06_RS03545;product=hydroxyethylthiazole kinase;protein_id=WP_063147717.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 268167 268967 . + . ID=gene-VMS06_RS03550;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=VMS06_RS03550 NZ_JAVXZI010000002.1 Protein Homology CDS 268167 268967 . + 0 ID=cds-WP_023300565.1;Parent=gene-VMS06_RS03550;Dbxref=GenBank:WP_023300565.1;Name=WP_023300565.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227910.1;locus_tag=VMS06_RS03550;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_023300565.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 269009 269755 . + . ID=gene-VMS06_RS03555;Name=VMS06_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03555 NZ_JAVXZI010000002.1 Protein Homology CDS 269009 269755 . + 0 ID=cds-WP_022648658.1;Parent=gene-VMS06_RS03555;Dbxref=GenBank:WP_022648658.1;Name=WP_022648658.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310931.1;locus_tag=VMS06_RS03555;product=GntR family transcriptional regulator;protein_id=WP_022648658.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 269729 270682 . - . ID=gene-VMS06_RS03560;Name=VMS06_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03560 NZ_JAVXZI010000002.1 Protein Homology CDS 269729 270682 . - 0 ID=cds-WP_063147718.1;Parent=gene-VMS06_RS03560;Dbxref=GenBank:WP_063147718.1;Name=WP_063147718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859240.1;locus_tag=VMS06_RS03560;product=PfkB family carbohydrate kinase;protein_id=WP_063147718.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 270679 271683 . - . ID=gene-VMS06_RS03565;Name=VMS06_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03565 NZ_JAVXZI010000002.1 Protein Homology CDS 270679 271683 . - 0 ID=cds-WP_023300562.1;Parent=gene-VMS06_RS03565;Dbxref=GenBank:WP_023300562.1;Name=WP_023300562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416602.1;locus_tag=VMS06_RS03565;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_023300562.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 271680 272957 . - . ID=gene-VMS06_RS03570;Name=VMS06_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03570 NZ_JAVXZI010000002.1 Protein Homology CDS 271680 272957 . - 0 ID=cds-WP_063147719.1;Parent=gene-VMS06_RS03570;Dbxref=GenBank:WP_063147719.1;Name=WP_063147719.1;Ontology_term=GO:0015858,GO:0005337,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461086.1;locus_tag=VMS06_RS03570;product=nucleoside permease;protein_id=WP_063147719.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 273206 274258 . + . ID=gene-VMS06_RS03575;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=VMS06_RS03575 NZ_JAVXZI010000002.1 Protein Homology CDS 273206 274258 . + 0 ID=cds-WP_022648654.1;Parent=gene-VMS06_RS03575;Dbxref=GenBank:WP_022648654.1;Name=WP_022648654.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=VMS06_RS03575;product=class I fructose-bisphosphate aldolase;protein_id=WP_022648654.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 274347 275246 . - . ID=gene-VMS06_RS03580;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=VMS06_RS03580 NZ_JAVXZI010000002.1 Protein Homology CDS 274347 275246 . - 0 ID=cds-WP_023306584.1;Parent=gene-VMS06_RS03580;Dbxref=GenBank:WP_023306584.1;Name=WP_023306584.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461084.1;locus_tag=VMS06_RS03580;product=lipid kinase YegS;protein_id=WP_023306584.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 275495 276856 . - . ID=gene-VMS06_RS03585;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=VMS06_RS03585 NZ_JAVXZI010000002.1 Protein Homology CDS 275495 276856 . - 0 ID=cds-WP_038416385.1;Parent=gene-VMS06_RS03585;Dbxref=GenBank:WP_038416385.1;Name=WP_038416385.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310916.1;locus_tag=VMS06_RS03585;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=WP_038416385.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 277066 277788 . - . ID=gene-VMS06_RS03590;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=VMS06_RS03590 NZ_JAVXZI010000002.1 Protein Homology CDS 277066 277788 . - 0 ID=cds-WP_015572364.1;Parent=gene-VMS06_RS03590;Dbxref=GenBank:WP_015572364.1;Name=WP_015572364.1;Ontology_term=GO:0000160,GO:2000142,GO:0003700;gbkey=CDS;gene=baeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077149.1;locus_tag=VMS06_RS03590;product=envelope stress response regulator BaeR;protein_id=WP_015572364.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 277785 279188 . - . ID=gene-VMS06_RS03595;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=VMS06_RS03595 NZ_JAVXZI010000002.1 Protein Homology CDS 277785 279188 . - 0 ID=cds-WP_063147720.1;Parent=gene-VMS06_RS03595;Dbxref=GenBank:WP_063147720.1;Name=WP_063147720.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176338.1;locus_tag=VMS06_RS03595;product=envelope stress sensor histidine kinase BaeS;protein_id=WP_063147720.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 279185 280600 . - . ID=gene-VMS06_RS03600;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=VMS06_RS03600 NZ_JAVXZI010000002.1 Protein Homology CDS 279185 280600 . - 0 ID=cds-WP_063147721.1;Parent=gene-VMS06_RS03600;Dbxref=GenBank:WP_063147721.1;Name=WP_063147721.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693078.1;locus_tag=VMS06_RS03600;product=MFS transporter;protein_id=WP_063147721.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 280601 283678 . - . ID=gene-VMS06_RS03605;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=VMS06_RS03605 NZ_JAVXZI010000002.1 Protein Homology CDS 280601 283678 . - 0 ID=cds-WP_045621311.1;Parent=gene-VMS06_RS03605;Dbxref=GenBank:WP_045621311.1;Name=WP_045621311.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mdtC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310911.1;locus_tag=VMS06_RS03605;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_045621311.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 283679 286801 . - . ID=gene-VMS06_RS03610;Name=VMS06_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03610 NZ_JAVXZI010000002.1 Protein Homology CDS 283679 286801 . - 0 ID=cds-WP_063147722.1;Parent=gene-VMS06_RS03610;Dbxref=GenBank:WP_063147722.1;Name=WP_063147722.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310910.1;locus_tag=VMS06_RS03610;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_063147722.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 286801 288003 . - . ID=gene-VMS06_RS03615;Name=VMS06_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03615 NZ_JAVXZI010000002.1 Protein Homology CDS 286801 288003 . - 0 ID=cds-WP_063147723.1;Parent=gene-VMS06_RS03615;Dbxref=GenBank:WP_063147723.1;Name=WP_063147723.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811254.1;locus_tag=VMS06_RS03615;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_063147723.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 288213 289565 . - . ID=gene-VMS06_RS03620;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=VMS06_RS03620 NZ_JAVXZI010000002.1 Protein Homology CDS 288213 289565 . - 0 ID=cds-WP_063147724.1;Parent=gene-VMS06_RS03620;Dbxref=GenBank:WP_063147724.1;Name=WP_063147724.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500859.1;locus_tag=VMS06_RS03620;product=molecular chaperone;protein_id=WP_063147724.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 289696 290568 . + . ID=gene-VMS06_RS03625;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=VMS06_RS03625 NZ_JAVXZI010000002.1 Protein Homology CDS 289696 290568 . + 0 ID=cds-WP_063146243.1;Parent=gene-VMS06_RS03625;Dbxref=GenBank:WP_063146243.1;Name=WP_063146243.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000288342.1;locus_tag=VMS06_RS03625;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_063146243.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 290533 293862 . - . ID=gene-VMS06_RS03630;Name=VMS06_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03630 NZ_JAVXZI010000002.1 Protein Homology CDS 290533 293862 . - 0 ID=cds-WP_063843710.1;Parent=gene-VMS06_RS03630;Dbxref=GenBank:WP_063843710.1;Name=WP_063843710.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416571.1;locus_tag=VMS06_RS03630;product=diguanylate cyclase;protein_id=WP_063843710.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 294205 294846 . + . ID=gene-VMS06_RS03635;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=VMS06_RS03635 NZ_JAVXZI010000002.1 Protein Homology CDS 294205 294846 . + 0 ID=cds-WP_000130320.1;Parent=gene-VMS06_RS03635;Dbxref=GenBank:WP_000130320.1;Name=WP_000130320.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=VMS06_RS03635;product=uridine kinase;protein_id=WP_000130320.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 294938 295519 . + . ID=gene-VMS06_RS03640;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=VMS06_RS03640 NZ_JAVXZI010000002.1 Protein Homology CDS 294938 295519 . + 0 ID=cds-WP_006811250.1;Parent=gene-VMS06_RS03640;Dbxref=GenBank:WP_006811250.1;Name=WP_006811250.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=VMS06_RS03640;product=dCTP deaminase;protein_id=WP_006811250.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 295543 297393 . + . ID=gene-VMS06_RS03645;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=VMS06_RS03645 NZ_JAVXZI010000002.1 Protein Homology CDS 295543 297393 . + 0 ID=cds-WP_063147726.1;Parent=gene-VMS06_RS03645;Dbxref=GenBank:WP_063147726.1;Name=WP_063147726.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252384.1;locus_tag=VMS06_RS03645;product=outer membrane assembly protein AsmA;protein_id=WP_063147726.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 297484 299067 . - . ID=gene-VMS06_RS03650;Name=VMS06_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03650 NZ_JAVXZI010000002.1 Protein Homology CDS 297484 299067 . - 0 ID=cds-WP_063147727.1;Parent=gene-VMS06_RS03650;Dbxref=GenBank:WP_063147727.1;Name=WP_063147727.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003841782.1;locus_tag=VMS06_RS03650;product=TerC family protein;protein_id=WP_063147727.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 299761 300897 . + . ID=gene-VMS06_RS03655;Name=VMS06_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03655 NZ_JAVXZI010000002.1 Protein Homology CDS 299761 300897 . + 0 ID=cds-WP_022648641.1;Parent=gene-VMS06_RS03655;Dbxref=GenBank:WP_022648641.1;Name=WP_022648641.1;Ontology_term=GO:0015774,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461063.1;locus_tag=VMS06_RS03655;product=polysaccharide export protein;protein_id=WP_022648641.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 300904 301347 . + . ID=gene-VMS06_RS03660;Name=wzb;gbkey=Gene;gene=wzb;gene_biotype=protein_coding;locus_tag=VMS06_RS03660 NZ_JAVXZI010000002.1 Protein Homology CDS 300904 301347 . + 0 ID=cds-WP_003862078.1;Parent=gene-VMS06_RS03660;Dbxref=GenBank:WP_003862078.1;Name=WP_003862078.1;gbkey=CDS;gene=wzb;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884509.1;locus_tag=VMS06_RS03660;product=low molecular weight protein-tyrosine-phosphatase Wzb;protein_id=WP_003862078.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 301350 303512 . + . ID=gene-VMS06_RS03665;Name=wzc;gbkey=Gene;gene=wzc;gene_biotype=protein_coding;locus_tag=VMS06_RS03665 NZ_JAVXZI010000002.1 Protein Homology CDS 301350 303512 . + 0 ID=cds-WP_063147728.1;Parent=gene-VMS06_RS03665;Dbxref=GenBank:WP_063147728.1;Name=WP_063147728.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzc;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416564.4;locus_tag=VMS06_RS03665;product=tyrosine-protein kinase Wzc;protein_id=WP_063147728.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 303635 304477 . + . ID=gene-VMS06_RS03670;Name=wcaA;gbkey=Gene;gene=wcaA;gene_biotype=protein_coding;locus_tag=VMS06_RS03670 NZ_JAVXZI010000002.1 Protein Homology CDS 303635 304477 . + 0 ID=cds-WP_006811246.1;Parent=gene-VMS06_RS03670;Dbxref=GenBank:WP_006811246.1;Name=WP_006811246.1;gbkey=CDS;gene=wcaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461060.1;locus_tag=VMS06_RS03670;product=colanic acid biosynthesis glycosyltransferase WcaA;protein_id=WP_006811246.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 304477 304968 . + . ID=gene-VMS06_RS03675;Name=wcaB;gbkey=Gene;gene=wcaB;gene_biotype=protein_coding;locus_tag=VMS06_RS03675 NZ_JAVXZI010000002.1 Protein Homology CDS 304477 304968 . + 0 ID=cds-WP_023300548.1;Parent=gene-VMS06_RS03675;Dbxref=GenBank:WP_023300548.1;Name=WP_023300548.1;gbkey=CDS;gene=wcaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386763.1;locus_tag=VMS06_RS03675;product=colanic acid biosynthesis acetyltransferase WcaB;protein_id=WP_023300548.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 304965 306182 . + . ID=gene-VMS06_RS03680;Name=wcaC;gbkey=Gene;gene=wcaC;gene_biotype=protein_coding;locus_tag=VMS06_RS03680 NZ_JAVXZI010000002.1 Protein Homology CDS 304965 306182 . + 0 ID=cds-WP_023300547.1;Parent=gene-VMS06_RS03680;Dbxref=GenBank:WP_023300547.1;Name=WP_023300547.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaC;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310889.1;locus_tag=VMS06_RS03680;product=colanic acid biosynthesis glycosyltransferase WcaC;protein_id=WP_023300547.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 306157 307377 . + . ID=gene-VMS06_RS03685;Name=wcaD;gbkey=Gene;gene=wcaD;gene_biotype=protein_coding;locus_tag=VMS06_RS03685 NZ_JAVXZI010000002.1 Protein Homology CDS 306157 307377 . + 0 ID=cds-WP_022648637.1;Parent=gene-VMS06_RS03685;Dbxref=GenBank:WP_022648637.1;Name=WP_022648637.1;gbkey=CDS;gene=wcaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863508.1;locus_tag=VMS06_RS03685;product=colanic acid polymerase WcaD;protein_id=WP_022648637.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 307394 308140 . + . ID=gene-VMS06_RS03690;Name=wcaE;gbkey=Gene;gene=wcaE;gene_biotype=protein_coding;locus_tag=VMS06_RS03690 NZ_JAVXZI010000002.1 Protein Homology CDS 307394 308140 . + 0 ID=cds-WP_023300546.1;Parent=gene-VMS06_RS03690;Dbxref=GenBank:WP_023300546.1;Name=WP_023300546.1;gbkey=CDS;gene=wcaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170821.1;locus_tag=VMS06_RS03690;product=colanic acid biosynthesis glycosyltransferase WcaE;protein_id=WP_023300546.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 308157 308705 . + . ID=gene-VMS06_RS03695;Name=wcaF;gbkey=Gene;gene=wcaF;gene_biotype=protein_coding;locus_tag=VMS06_RS03695 NZ_JAVXZI010000002.1 Protein Homology CDS 308157 308705 . + 0 ID=cds-WP_003863512.1;Parent=gene-VMS06_RS03695;Dbxref=GenBank:WP_003863512.1;Name=WP_003863512.1;gbkey=CDS;gene=wcaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416558.1;locus_tag=VMS06_RS03695;product=colanic acid biosynthesis acetyltransferase WcaF;protein_id=WP_003863512.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 308730 309851 . + . ID=gene-VMS06_RS03700;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=VMS06_RS03700 NZ_JAVXZI010000002.1 Protein Homology CDS 308730 309851 . + 0 ID=cds-WP_003863514.1;Parent=gene-VMS06_RS03700;Dbxref=GenBank:WP_003863514.1;Name=WP_003863514.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128297.1;locus_tag=VMS06_RS03700;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_003863514.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 309854 310819 . + . ID=gene-VMS06_RS03705;Name=fcl;gbkey=Gene;gene=fcl;gene_biotype=protein_coding;gene_synonym=wcaG,yefB;locus_tag=VMS06_RS03705 NZ_JAVXZI010000002.1 Protein Homology CDS 309854 310819 . + 0 ID=cds-WP_015572377.1;Parent=gene-VMS06_RS03705;Dbxref=GenBank:WP_015572377.1;Name=WP_015572377.1;Ontology_term=GO:0042351,GO:0016853,GO:0050577;gbkey=CDS;gene=fcl;go_function=isomerase activity|0016853||IEA,GDP-L-fucose synthase activity|0050577||IEA;go_process='de novo' GDP-L-fucose biosynthetic process|0042351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310884.1;locus_tag=VMS06_RS03705;product=GDP-L-fucose synthase;protein_id=WP_015572377.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 310822 311301 . + . ID=gene-VMS06_RS03710;Name=VMS06_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03710 NZ_JAVXZI010000002.1 Protein Homology CDS 310822 311301 . + 0 ID=cds-WP_074136338.1;Parent=gene-VMS06_RS03710;Dbxref=GenBank:WP_074136338.1;Name=WP_074136338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416555.2;locus_tag=VMS06_RS03710;product=GDP-mannose mannosyl hydrolase;protein_id=WP_074136338.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 311298 312521 . + . ID=gene-VMS06_RS03715;Name=wcaI;gbkey=Gene;gene=wcaI;gene_biotype=protein_coding;locus_tag=VMS06_RS03715 NZ_JAVXZI010000002.1 Protein Homology CDS 311298 312521 . + 0 ID=cds-WP_022648633.1;Parent=gene-VMS06_RS03715;Dbxref=GenBank:WP_022648633.1;Name=WP_022648633.1;gbkey=CDS;gene=wcaI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310882.1;locus_tag=VMS06_RS03715;product=colanic acid biosynthesis fucosyltransferase WcaI;protein_id=WP_022648633.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 312525 313961 . + . ID=gene-VMS06_RS03720;Name=cpsB;gbkey=Gene;gene=cpsB;gene_biotype=protein_coding;locus_tag=VMS06_RS03720 NZ_JAVXZI010000002.1 Protein Homology CDS 312525 313961 . + 0 ID=cds-WP_063137677.1;Parent=gene-VMS06_RS03720;Dbxref=GenBank:WP_063137677.1;Name=WP_063137677.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;gene=cpsB;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310881.1;locus_tag=VMS06_RS03720;product=mannose-1-phosphate guanyltransferase;protein_id=WP_063137677.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 314070 315440 . + . ID=gene-VMS06_RS03725;Name=cpsG;gbkey=Gene;gene=cpsG;gene_biotype=protein_coding;gene_synonym=manB;locus_tag=VMS06_RS03725 NZ_JAVXZI010000002.1 Protein Homology CDS 314070 315440 . + 0 ID=cds-WP_022648631.1;Parent=gene-VMS06_RS03725;Dbxref=GenBank:WP_022648631.1;Name=WP_022648631.1;gbkey=CDS;gene=cpsG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310880.1;locus_tag=VMS06_RS03725;product=colanic acid biosynthesis phosphomannomutase CpsG;protein_id=WP_022648631.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 315536 316930 . + . ID=gene-VMS06_RS03730;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=VMS06_RS03730 NZ_JAVXZI010000002.1 Protein Homology CDS 315536 316930 . + 0 ID=cds-WP_023300544.1;Parent=gene-VMS06_RS03730;Dbxref=GenBank:WP_023300544.1;Name=WP_023300544.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461048.1;locus_tag=VMS06_RS03730;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_023300544.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 316932 318410 . + . ID=gene-VMS06_RS03735;Name=wzxC;gbkey=Gene;gene=wzxC;gene_biotype=protein_coding;locus_tag=VMS06_RS03735 NZ_JAVXZI010000002.1 Protein Homology CDS 316932 318410 . + 0 ID=cds-WP_063843711.1;Parent=gene-VMS06_RS03735;Dbxref=GenBank:WP_063843711.1;Name=WP_063843711.1;gbkey=CDS;gene=wzxC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310878.1;locus_tag=VMS06_RS03735;product=colanic acid undecaprenyl disphosphate flippase WzxC;protein_id=WP_063843711.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 318426 319706 . + . ID=gene-VMS06_RS03740;Name=wcaK;gbkey=Gene;gene=wcaK;gene_biotype=protein_coding;locus_tag=VMS06_RS03740 NZ_JAVXZI010000002.1 Protein Homology CDS 318426 319706 . + 0 ID=cds-WP_063147730.1;Parent=gene-VMS06_RS03740;Dbxref=GenBank:WP_063147730.1;Name=WP_063147730.1;gbkey=CDS;gene=wcaK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310877.1;locus_tag=VMS06_RS03740;product=colanic acid biosynthesis pyruvyl transferase WcaK;protein_id=WP_063147730.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 319703 320923 . + . ID=gene-VMS06_RS03745;Name=wcaL;gbkey=Gene;gene=wcaL;gene_biotype=protein_coding;locus_tag=VMS06_RS03745 NZ_JAVXZI010000002.1 Protein Homology CDS 319703 320923 . + 0 ID=cds-WP_063147731.1;Parent=gene-VMS06_RS03745;Dbxref=GenBank:WP_063147731.1;Name=WP_063147731.1;Ontology_term=GO:0016757;gbkey=CDS;gene=wcaL;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416548.1;locus_tag=VMS06_RS03745;product=colanic acid biosynthesis glycosyltransferase WcaL;protein_id=WP_063147731.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 320936 322327 . + . ID=gene-VMS06_RS03750;Name=wcaM;gbkey=Gene;gene=wcaM;gene_biotype=protein_coding;locus_tag=VMS06_RS03750 NZ_JAVXZI010000002.1 Protein Homology CDS 320936 322327 . + 0 ID=cds-WP_063147732.1;Parent=gene-VMS06_RS03750;Dbxref=GenBank:WP_063147732.1;Name=WP_063147732.1;gbkey=CDS;gene=wcaM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499433.1;locus_tag=VMS06_RS03750;product=colanic acid biosynthesis protein WcaM;protein_id=WP_063147732.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 322502 323398 . + . ID=gene-VMS06_RS03755;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=VMS06_RS03755 NZ_JAVXZI010000002.1 Protein Homology CDS 322502 323398 . + 0 ID=cds-WP_038416367.1;Parent=gene-VMS06_RS03755;Dbxref=GenBank:WP_038416367.1;Name=WP_038416367.1;Ontology_term=GO:0006011,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883269.1;locus_tag=VMS06_RS03755;product=GalU regulator GalF;protein_id=WP_038416367.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 323726 325123 . + . ID=gene-VMS06_RS03760;Name=VMS06_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03760 NZ_JAVXZI010000002.1 Protein Homology CDS 323726 325123 . + 0 ID=cds-WP_032103498.1;Parent=gene-VMS06_RS03760;Dbxref=GenBank:WP_032103498.1;Name=WP_032103498.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070922.1;locus_tag=VMS06_RS03760;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_032103498.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 325123 326505 . + . ID=gene-VMS06_RS03765;Name=VMS06_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03765 NZ_JAVXZI010000002.1 Protein Homology CDS 325123 326505 . + 0 ID=cds-WP_032609656.1;Parent=gene-VMS06_RS03765;Dbxref=GenBank:WP_032609656.1;Name=WP_032609656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070921.1;locus_tag=VMS06_RS03765;product=phosphohexomutase domain-containing protein;protein_id=WP_032609656.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 326540 327859 . + . ID=gene-VMS06_RS03770;Name=VMS06_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03770 NZ_JAVXZI010000002.1 Protein Homology CDS 326540 327859 . + 0 ID=cds-WP_032609654.1;Parent=gene-VMS06_RS03770;Dbxref=GenBank:WP_032609654.1;Name=WP_032609654.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884488.1;locus_tag=VMS06_RS03770;product=O-antigen ligase family protein;protein_id=WP_032609654.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 327856 328986 . + . ID=gene-VMS06_RS03775;Name=VMS06_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03775 NZ_JAVXZI010000002.1 Protein Homology CDS 327856 328986 . + 0 ID=cds-WP_023295010.1;Parent=gene-VMS06_RS03775;Dbxref=GenBank:WP_023295010.1;Name=WP_023295010.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070919.1;locus_tag=VMS06_RS03775;product=glycosyltransferase;protein_id=WP_023295010.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 328997 330181 . + . ID=gene-VMS06_RS03780;Name=VMS06_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03780 NZ_JAVXZI010000002.1 Protein Homology CDS 328997 330181 . + 0 ID=cds-WP_038416365.1;Parent=gene-VMS06_RS03780;Dbxref=GenBank:WP_038416365.1;Name=WP_038416365.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: protein motif:HMM:NF024831.7;locus_tag=VMS06_RS03780;product=glycosyltransferase family 4 protein;protein_id=WP_038416365.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 330178 331671 . + . ID=gene-VMS06_RS03785;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=VMS06_RS03785 NZ_JAVXZI010000002.1 Protein Homology CDS 330178 331671 . + 0 ID=cds-WP_080460803.1;Parent=gene-VMS06_RS03785;Dbxref=GenBank:WP_080460803.1;Name=WP_080460803.1;Ontology_term=GO:0071555,GO:0015648;gbkey=CDS;gene=murJ;go_function=lipid-linked peptidoglycan transporter activity|0015648||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070917.1;locus_tag=VMS06_RS03785;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_080460803.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 331681 332880 . + . ID=gene-VMS06_RS03790;Name=VMS06_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03790 NZ_JAVXZI010000002.1 Protein Homology CDS 331681 332880 . + 0 ID=cds-WP_023295007.1;Parent=gene-VMS06_RS03790;Dbxref=GenBank:WP_023295007.1;Name=WP_023295007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884484.1;locus_tag=VMS06_RS03790;product=glycosyltransferase;protein_id=WP_023295007.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 332858 334039 . + . ID=gene-VMS06_RS03795;Name=VMS06_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03795 NZ_JAVXZI010000002.1 Protein Homology CDS 332858 334039 . + 0 ID=cds-WP_023295006.1;Parent=gene-VMS06_RS03795;Dbxref=GenBank:WP_023295006.1;Name=WP_023295006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070915.1;locus_tag=VMS06_RS03795;product=glycosyltransferase family 4 protein;protein_id=WP_023295006.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 334083 335519 . + . ID=gene-VMS06_RS03800;Name=wbaP;gbkey=Gene;gene=wbaP;gene_biotype=protein_coding;locus_tag=VMS06_RS03800 NZ_JAVXZI010000002.1 Protein Homology CDS 334083 335519 . + 0 ID=cds-WP_038416362.1;Parent=gene-VMS06_RS03800;Dbxref=GenBank:WP_038416362.1;Name=WP_038416362.1;Ontology_term=GO:0000271,GO:0016740,GO:0005886,GO:0016020;gbkey=CDS;gene=wbaP;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transferase activity|0016740||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884482.1;locus_tag=VMS06_RS03800;product=undecaprenyl-phosphate galactose phosphotransferase WbaP;protein_id=WP_038416362.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 335559 336590 . + . ID=gene-VMS06_RS03805;Name=VMS06_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03805 NZ_JAVXZI010000002.1 Protein Homology CDS 335559 336590 . + 0 ID=cds-WP_063147734.1;Parent=gene-VMS06_RS03805;Dbxref=GenBank:WP_063147734.1;Name=WP_063147734.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.7;locus_tag=VMS06_RS03805;product=glycosyltransferase;protein_id=WP_063147734.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 336670 337734 . + . ID=gene-VMS06_RS03810;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=VMS06_RS03810 NZ_JAVXZI010000002.1 Protein Homology CDS 336670 337734 . + 0 ID=cds-WP_038416360.1;Parent=gene-VMS06_RS03810;Dbxref=GenBank:WP_038416360.1;Name=WP_038416360.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015706044.1;locus_tag=VMS06_RS03810;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_038416360.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 337750 338616 . + . ID=gene-VMS06_RS03815;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=VMS06_RS03815 NZ_JAVXZI010000002.1 Protein Homology CDS 337750 338616 . + 0 ID=cds-WP_032609646.1;Parent=gene-VMS06_RS03815;Dbxref=GenBank:WP_032609646.1;Name=WP_032609646.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884479.1;locus_tag=VMS06_RS03815;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_032609646.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 338629 339519 . + . ID=gene-VMS06_RS03820;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=VMS06_RS03820 NZ_JAVXZI010000002.1 Protein Homology CDS 338629 339519 . + 0 ID=cds-WP_038416359.1;Parent=gene-VMS06_RS03820;Dbxref=GenBank:WP_038416359.1;Name=WP_038416359.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227856.1;locus_tag=VMS06_RS03820;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_038416359.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 339530 340078 . + . ID=gene-VMS06_RS03825;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=VMS06_RS03825 NZ_JAVXZI010000002.1 Protein Homology CDS 339530 340078 . + 0 ID=cds-WP_063147738.1;Parent=gene-VMS06_RS03825;Dbxref=GenBank:WP_063147738.1;Name=WP_063147738.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019106521.1;locus_tag=VMS06_RS03825;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_063147738.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 340214 341620 . + . ID=gene-VMS06_RS03830;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=VMS06_RS03830 NZ_JAVXZI010000002.1 Protein Homology CDS 340214 341620 . + 0 ID=cds-WP_023294999.1;Parent=gene-VMS06_RS03830;Dbxref=GenBank:WP_023294999.1;Name=WP_023294999.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461026.1;locus_tag=VMS06_RS03830;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_023294999.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 341874 343040 . + . ID=gene-VMS06_RS03835;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=VMS06_RS03835 NZ_JAVXZI010000002.1 Protein Homology CDS 341874 343040 . + 0 ID=cds-WP_032609644.1;Parent=gene-VMS06_RS03835;Dbxref=GenBank:WP_032609644.1;Name=WP_032609644.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227854.1;locus_tag=VMS06_RS03835;product=UDP-glucose 6-dehydrogenase;protein_id=WP_032609644.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq pseudogene 343163 344478 . + . ID=gene-VMS06_RS03840;Name=VMS06_RS03840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS03840;pseudo=true NZ_JAVXZI010000002.1 Protein Homology CDS 343163 344478 . + 0 ID=cds-VMS06_RS03840;Parent=gene-VMS06_RS03840;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815237.1;locus_tag=VMS06_RS03840;product=IS4 family transposase;pseudo=true;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 344516 345520 . - . ID=gene-VMS06_RS03845;Name=VMS06_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03845 NZ_JAVXZI010000002.1 Protein Homology CDS 344516 345520 . - 0 ID=cds-WP_023300532.1;Parent=gene-VMS06_RS03845;Dbxref=GenBank:WP_023300532.1;Name=WP_023300532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432020.1;locus_tag=VMS06_RS03845;product=NAD-dependent epimerase;protein_id=WP_023300532.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 345713 346693 . + . ID=gene-VMS06_RS03850;Name=wzzB;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=VMS06_RS03850 NZ_JAVXZI010000002.1 Protein Homology CDS 345713 346693 . + 0 ID=cds-WP_063147739.1;Parent=gene-VMS06_RS03850;Dbxref=GenBank:WP_063147739.1;Name=WP_063147739.1;Ontology_term=GO:0009103;gbkey=CDS;gene=wzzB;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097848.1;locus_tag=VMS06_RS03850;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_063147739.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 346733 347344 . - . ID=gene-VMS06_RS03855;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=VMS06_RS03855 NZ_JAVXZI010000002.1 Protein Homology CDS 346733 347344 . - 0 ID=cds-WP_063147740.1;Parent=gene-VMS06_RS03855;Dbxref=GenBank:WP_063147740.1;Name=WP_063147740.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310854.1;locus_tag=VMS06_RS03855;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_063147740.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 347338 348114 . - . ID=gene-VMS06_RS03860;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=VMS06_RS03860 NZ_JAVXZI010000002.1 Protein Homology CDS 347338 348114 . - 0 ID=cds-WP_063147741.1;Parent=gene-VMS06_RS03860;Dbxref=GenBank:WP_063147741.1;Name=WP_063147741.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310853.1;locus_tag=VMS06_RS03860;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_063147741.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 348096 348833 . - . ID=gene-VMS06_RS03865;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=VMS06_RS03865 NZ_JAVXZI010000002.1 Protein Homology CDS 348096 348833 . - 0 ID=cds-WP_063147742.1;Parent=gene-VMS06_RS03865;Dbxref=GenBank:WP_063147742.1;Name=WP_063147742.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227841.1;locus_tag=VMS06_RS03865;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_063147742.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 348833 349423 . - . ID=gene-VMS06_RS03870;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=VMS06_RS03870 NZ_JAVXZI010000002.1 Protein Homology CDS 348833 349423 . - 0 ID=cds-WP_003859485.1;Parent=gene-VMS06_RS03870;Dbxref=GenBank:WP_003859485.1;Name=WP_003859485.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=VMS06_RS03870;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_003859485.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 349423 350490 . - . ID=gene-VMS06_RS03875;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=VMS06_RS03875 NZ_JAVXZI010000002.1 Protein Homology CDS 349423 350490 . - 0 ID=cds-WP_063147743.1;Parent=gene-VMS06_RS03875;Dbxref=GenBank:WP_063147743.1;Name=WP_063147743.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310850.2;locus_tag=VMS06_RS03875;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_063147743.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 350487 351548 . - . ID=gene-VMS06_RS03880;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=VMS06_RS03880 NZ_JAVXZI010000002.1 Protein Homology CDS 350487 351548 . - 0 ID=cds-WP_022648605.1;Parent=gene-VMS06_RS03880;Dbxref=GenBank:WP_022648605.1;Name=WP_022648605.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959633.1;locus_tag=VMS06_RS03880;product=histidinol-phosphate transaminase;protein_id=WP_022648605.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 351545 352849 . - . ID=gene-VMS06_RS03885;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=VMS06_RS03885 NZ_JAVXZI010000002.1 Protein Homology CDS 351545 352849 . - 0 ID=cds-WP_023300525.1;Parent=gene-VMS06_RS03885;Dbxref=GenBank:WP_023300525.1;Name=WP_023300525.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416524.1;locus_tag=VMS06_RS03885;product=histidinol dehydrogenase;protein_id=WP_023300525.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 352855 353754 . - . ID=gene-VMS06_RS03890;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=VMS06_RS03890 NZ_JAVXZI010000002.1 Protein Homology CDS 352855 353754 . - 0 ID=cds-WP_032623983.1;Parent=gene-VMS06_RS03890;Dbxref=GenBank:WP_032623983.1;Name=WP_032623983.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=VMS06_RS03890;product=ATP phosphoribosyltransferase;protein_id=WP_032623983.1;transl_table=11 NZ_JAVXZI010000002.1 cmsearch sequence_feature 353800 353923 . - . ID=id-NZ_JAVXZI010000002.1:353800..353923;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVXZI010000002.1 RefSeq gene 353899 353949 . - . ID=gene-VMS06_RS03895;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=VMS06_RS03895 NZ_JAVXZI010000002.1 Protein Homology CDS 353899 353949 . - 0 ID=cds-WP_099516347.1;Parent=gene-VMS06_RS03895;Dbxref=GenBank:WP_099516347.1;Name=WP_099516347.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310846.1;locus_tag=VMS06_RS03895;product=his operon leader peptide;protein_id=WP_099516347.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 354122 354946 . + . ID=gene-VMS06_RS03900;Name=VMS06_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03900 NZ_JAVXZI010000002.1 Protein Homology CDS 354122 354946 . + 0 ID=cds-WP_006811206.1;Parent=gene-VMS06_RS03900;Dbxref=GenBank:WP_006811206.1;Name=WP_006811206.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461015.1;locus_tag=VMS06_RS03900;product=SDR family oxidoreductase;protein_id=WP_006811206.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 354988 355917 . + . ID=gene-VMS06_RS03905;Name=VMS06_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03905 NZ_JAVXZI010000002.1 Protein Homology CDS 354988 355917 . + 0 ID=cds-WP_022648603.1;Parent=gene-VMS06_RS03905;Dbxref=GenBank:WP_022648603.1;Name=WP_022648603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883293.1;locus_tag=VMS06_RS03905;product=LysR substrate-binding domain-containing protein;protein_id=WP_022648603.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 356137 356199 . + . ID=gene-VMS06_RS03910;Name=yoeI;gbkey=Gene;gene=yoeI;gene_biotype=protein_coding;locus_tag=VMS06_RS03910 NZ_JAVXZI010000002.1 Protein Homology CDS 356137 356199 . + 0 ID=cds-WP_099458931.1;Parent=gene-VMS06_RS03910;Dbxref=GenBank:WP_099458931.1;Name=WP_099458931.1;gbkey=CDS;gene=yoeI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791246.1;locus_tag=VMS06_RS03910;product=membrane protein YoeI;protein_id=WP_099458931.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 356189 357547 . + . ID=gene-VMS06_RS03915;Name=VMS06_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03915 NZ_JAVXZI010000002.1 Protein Homology CDS 356189 357547 . + 0 ID=cds-WP_022648602.1;Parent=gene-VMS06_RS03915;Dbxref=GenBank:WP_022648602.1;Name=WP_022648602.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416518.2;locus_tag=VMS06_RS03915;product=APC family permease;protein_id=WP_022648602.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 357677 359113 . - . ID=gene-VMS06_RS03920;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=VMS06_RS03920 NZ_JAVXZI010000002.1 Protein Homology CDS 357677 359113 . - 0 ID=cds-WP_400175058.1;Parent=gene-VMS06_RS03920;Dbxref=GenBank:WP_400175058.1;Name=WP_400175058.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811202.1;locus_tag=VMS06_RS03920;product=exodeoxyribonuclease I;protein_id=WP_400175058.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 359305 360477 . + . ID=gene-VMS06_RS03925;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=VMS06_RS03925 NZ_JAVXZI010000002.1 Protein Homology CDS 359305 360477 . + 0 ID=cds-WP_139153925.1;Parent=gene-VMS06_RS03925;Dbxref=GenBank:WP_139153925.1;Name=WP_139153925.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461007.1;locus_tag=VMS06_RS03925;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_139153925.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 360596 361069 . + . ID=gene-VMS06_RS03930;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=VMS06_RS03930 NZ_JAVXZI010000002.1 Protein Homology CDS 360596 361069 . + 0 ID=cds-WP_063146273.1;Parent=gene-VMS06_RS03930;Dbxref=GenBank:WP_063146273.1;Name=WP_063146273.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572403.1;locus_tag=VMS06_RS03930;product=DNA gyrase inhibitor SbmC;protein_id=WP_063146273.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 361161 362219 . + . ID=gene-VMS06_RS03935;Name=VMS06_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03935 NZ_JAVXZI010000002.1 Protein Homology CDS 361161 362219 . + 0 ID=cds-WP_022648598.1;Parent=gene-VMS06_RS03935;Dbxref=GenBank:WP_022648598.1;Name=WP_022648598.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227826.1;locus_tag=VMS06_RS03935;product=FUSC family protein;protein_id=WP_022648598.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 362367 362702 . + . ID=gene-VMS06_RS03940;Name=VMS06_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03940 NZ_JAVXZI010000002.1 Protein Homology CDS 362367 362702 . + 0 ID=cds-WP_000450410.1;Parent=gene-VMS06_RS03940;Dbxref=GenBank:WP_000450410.1;Name=WP_000450410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461004.1;locus_tag=VMS06_RS03940;product=DUF496 family protein;protein_id=WP_000450410.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 362839 362914 . - . ID=gene-VMS06_RS03945;Name=VMS06_RS03945;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS03945 NZ_JAVXZI010000002.1 tRNAscan-SE tRNA 362839 362914 . - . ID=rna-VMS06_RS03945;Parent=gene-VMS06_RS03945;anticodon=(pos:complement(362879..362881));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS03945;product=tRNA-Asn NZ_JAVXZI010000002.1 tRNAscan-SE exon 362839 362914 . - . ID=exon-VMS06_RS03945-1;Parent=rna-VMS06_RS03945;anticodon=(pos:complement(362879..362881));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS03945;product=tRNA-Asn NZ_JAVXZI010000002.1 RefSeq gene 363141 364559 . + . ID=gene-VMS06_RS03950;Name=emmdR;gbkey=Gene;gene=emmdR;gene_biotype=protein_coding;locus_tag=VMS06_RS03950 NZ_JAVXZI010000002.1 Protein Homology CDS 363141 364559 . + 0 ID=cds-WP_063147746.1;Parent=gene-VMS06_RS03950;Dbxref=GenBank:WP_063147746.1;Name=WP_063147746.1;gbkey=CDS;gene=emmdR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012906303.1;locus_tag=VMS06_RS03950;product=multidrug efflux MATE transporter EmmdR;protein_id=WP_063147746.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 364663 364738 . + . ID=gene-VMS06_RS03955;Name=VMS06_RS03955;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS03955 NZ_JAVXZI010000002.1 tRNAscan-SE tRNA 364663 364738 . + . ID=rna-VMS06_RS03955;Parent=gene-VMS06_RS03955;anticodon=(pos:364696..364698);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS03955;product=tRNA-Asn NZ_JAVXZI010000002.1 tRNAscan-SE exon 364663 364738 . + . ID=exon-VMS06_RS03955-1;Parent=rna-VMS06_RS03955;anticodon=(pos:364696..364698);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS03955;product=tRNA-Asn NZ_JAVXZI010000002.1 RefSeq gene 364882 366654 . - . ID=gene-VMS06_RS03960;Name=VMS06_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03960 NZ_JAVXZI010000002.1 Protein Homology CDS 364882 366654 . - 0 ID=cds-WP_063147747.1;Parent=gene-VMS06_RS03960;Dbxref=GenBank:WP_063147747.1;Name=WP_063147747.1;Ontology_term=GO:0006508,GO:0004177,GO:0046872,GO:0070006,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aminopeptidase activity|0004177||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432071.1;locus_tag=VMS06_RS03960;product=aminopeptidase P family protein;protein_id=WP_063147747.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 366670 368124 . - . ID=gene-VMS06_RS03965;Name=VMS06_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03965 NZ_JAVXZI010000002.1 Protein Homology CDS 366670 368124 . - 0 ID=cds-WP_022648595.1;Parent=gene-VMS06_RS03965;Dbxref=GenBank:WP_022648595.1;Name=WP_022648595.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310806.1;locus_tag=VMS06_RS03965;product=AMP nucleosidase;protein_id=WP_022648595.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 368201 369517 . - . ID=gene-VMS06_RS03970;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=VMS06_RS03970 NZ_JAVXZI010000002.1 Protein Homology CDS 368201 369517 . - 0 ID=cds-WP_063147748.1;Parent=gene-VMS06_RS03970;Dbxref=GenBank:WP_063147748.1;Name=WP_063147748.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859514.1;locus_tag=VMS06_RS03970;product=shikimate transporter;protein_id=WP_063147748.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 369774 370349 . + . ID=gene-VMS06_RS03975;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=VMS06_RS03975 NZ_JAVXZI010000002.1 Protein Homology CDS 369774 370349 . + 0 ID=cds-WP_023300518.1;Parent=gene-VMS06_RS03975;Dbxref=GenBank:WP_023300518.1;Name=WP_023300518.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176258.1;locus_tag=VMS06_RS03975;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_023300518.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 370346 371269 . - . ID=gene-VMS06_RS03980;Name=VMS06_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03980 NZ_JAVXZI010000002.1 Protein Homology CDS 370346 371269 . - 0 ID=cds-WP_160863192.1;Parent=gene-VMS06_RS03980;Dbxref=GenBank:WP_160863192.1;Name=WP_160863192.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225915.1;locus_tag=VMS06_RS03980;product=acyltransferase;protein_id=WP_160863192.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 371308 374370 . - . ID=gene-VMS06_RS03985;Name=VMS06_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03985 NZ_JAVXZI010000002.1 Protein Homology CDS 371308 374370 . - 0 ID=cds-WP_063147749.1;Parent=gene-VMS06_RS03985;Dbxref=GenBank:WP_063147749.1;Name=WP_063147749.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705951.1;locus_tag=VMS06_RS03985;product=efflux RND transporter permease subunit;protein_id=WP_063147749.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 374370 375455 . - . ID=gene-VMS06_RS03990;Name=VMS06_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03990 NZ_JAVXZI010000002.1 Protein Homology CDS 374370 375455 . - 0 ID=cds-WP_063147750.1;Parent=gene-VMS06_RS03990;Dbxref=GenBank:WP_063147750.1;Name=WP_063147750.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223727.1;locus_tag=VMS06_RS03990;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_063147750.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 375928 376359 . + . ID=gene-VMS06_RS03995;Name=VMS06_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS03995 NZ_JAVXZI010000002.1 Protein Homology CDS 375928 376359 . + 0 ID=cds-WP_023300514.1;Parent=gene-VMS06_RS03995;Dbxref=GenBank:WP_023300514.1;Name=WP_023300514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229901.1;locus_tag=VMS06_RS03995;product=universal stress protein;protein_id=WP_023300514.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 376407 379100 . + . ID=gene-VMS06_RS04000;Name=VMS06_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04000 NZ_JAVXZI010000002.1 Protein Homology CDS 376407 379100 . + 0 ID=cds-WP_038416342.1;Parent=gene-VMS06_RS04000;Dbxref=GenBank:WP_038416342.1;Name=WP_038416342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572411.1;locus_tag=VMS06_RS04000;product=cation-transporting P-type ATPase;protein_id=WP_038416342.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 379163 380095 . + . ID=gene-VMS06_RS04005;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=VMS06_RS04005 NZ_JAVXZI010000002.1 Protein Homology CDS 379163 380095 . + 0 ID=cds-WP_063147751.1;Parent=gene-VMS06_RS04005;Dbxref=GenBank:WP_063147751.1;Name=WP_063147751.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572412.1;locus_tag=VMS06_RS04005;product=L%2CD-transpeptidase;protein_id=WP_063147751.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 380179 380254 . - . ID=gene-VMS06_RS04010;Name=VMS06_RS04010;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS04010 NZ_JAVXZI010000002.1 tRNAscan-SE tRNA 380179 380254 . - . ID=rna-VMS06_RS04010;Parent=gene-VMS06_RS04010;anticodon=(pos:complement(380219..380221));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS04010;product=tRNA-Asn NZ_JAVXZI010000002.1 tRNAscan-SE exon 380179 380254 . - . ID=exon-VMS06_RS04010-1;Parent=rna-VMS06_RS04010;anticodon=(pos:complement(380219..380221));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS04010;product=tRNA-Asn NZ_JAVXZI010000002.1 RefSeq gene 380575 381492 . + . ID=gene-VMS06_RS04015;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=VMS06_RS04015 NZ_JAVXZI010000002.1 Protein Homology CDS 380575 381492 . + 0 ID=cds-WP_022648585.1;Parent=gene-VMS06_RS04015;Dbxref=GenBank:WP_022648585.1;Name=WP_022648585.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227759.1;locus_tag=VMS06_RS04015;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_022648585.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 381589 382539 . + . ID=gene-VMS06_RS04020;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=VMS06_RS04020 NZ_JAVXZI010000002.1 Protein Homology CDS 381589 382539 . + 0 ID=cds-WP_063147752.1;Parent=gene-VMS06_RS04020;Dbxref=GenBank:WP_063147752.1;Name=WP_063147752.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227758.1;locus_tag=VMS06_RS04020;product=HTH-type transcriptional regulator Cbl;protein_id=WP_063147752.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq pseudogene 382725 383077 . + . ID=gene-VMS06_RS04025;Name=VMS06_RS04025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS04025;pseudo=true NZ_JAVXZI010000002.1 Protein Homology CDS 382725 383077 . + 0 ID=cds-VMS06_RS04025;Parent=gene-VMS06_RS04025;Note=frameshifted;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383312.1;locus_tag=VMS06_RS04025;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 383082 383384 . + . ID=gene-VMS06_RS04030;Name=VMS06_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04030 NZ_JAVXZI010000002.1 Protein Homology CDS 383082 383384 . + 0 ID=cds-WP_017383313.1;Parent=gene-VMS06_RS04030;Dbxref=GenBank:WP_017383313.1;Name=WP_017383313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533828.1;locus_tag=VMS06_RS04030;product=helix-turn-helix domain-containing protein;protein_id=WP_017383313.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 383430 383505 . - . ID=gene-VMS06_RS04035;Name=VMS06_RS04035;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS04035 NZ_JAVXZI010000002.1 tRNAscan-SE tRNA 383430 383505 . - . ID=rna-VMS06_RS04035;Parent=gene-VMS06_RS04035;anticodon=(pos:complement(383470..383472));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS04035;product=tRNA-Asn NZ_JAVXZI010000002.1 tRNAscan-SE exon 383430 383505 . - . ID=exon-VMS06_RS04035-1;Parent=rna-VMS06_RS04035;anticodon=(pos:complement(383470..383472));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS04035;product=tRNA-Asn NZ_JAVXZI010000002.1 RefSeq gene 383673 385862 . - . ID=gene-VMS06_RS04040;Name=VMS06_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04040 NZ_JAVXZI010000002.1 Protein Homology CDS 383673 385862 . - 0 ID=cds-WP_048966154.1;Parent=gene-VMS06_RS04040;Dbxref=GenBank:WP_048966154.1;Name=WP_048966154.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859533.1;locus_tag=VMS06_RS04040;product=TonB-dependent siderophore receptor;protein_id=WP_048966154.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 385889 387214 . - . ID=gene-VMS06_RS04045;Name=VMS06_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04045 NZ_JAVXZI010000002.1 Protein Homology CDS 385889 387214 . - 0 ID=cds-WP_023306541.1;Parent=gene-VMS06_RS04045;Dbxref=GenBank:WP_023306541.1;Name=WP_023306541.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383315.1;locus_tag=VMS06_RS04045;product=lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein;protein_id=WP_023306541.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 387211 388953 . - . ID=gene-VMS06_RS04050;Name=iucC;gbkey=Gene;gene=iucC;gene_biotype=protein_coding;locus_tag=VMS06_RS04050 NZ_JAVXZI010000002.1 Protein Homology CDS 387211 388953 . - 0 ID=cds-WP_074136340.1;Parent=gene-VMS06_RS04050;Dbxref=GenBank:WP_074136340.1;Name=WP_074136340.1;gbkey=CDS;gene=iucC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811188.1;locus_tag=VMS06_RS04050;product=IucA/IucC family protein;protein_id=WP_074136340.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 388950 389897 . - . ID=gene-VMS06_RS04055;Name=VMS06_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04055 NZ_JAVXZI010000002.1 Protein Homology CDS 388950 389897 . - 0 ID=cds-WP_058646942.1;Parent=gene-VMS06_RS04055;Dbxref=GenBank:WP_058646942.1;Name=WP_058646942.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693124.1;locus_tag=VMS06_RS04055;product=GNAT family N-acetyltransferase;protein_id=WP_058646942.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 389897 391639 . - . ID=gene-VMS06_RS04060;Name=VMS06_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04060 NZ_JAVXZI010000002.1 Protein Homology CDS 389897 391639 . - 0 ID=cds-WP_063147753.1;Parent=gene-VMS06_RS04060;Dbxref=GenBank:WP_063147753.1;Name=WP_063147753.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811186.1;locus_tag=VMS06_RS04060;product=IucA/IucC family protein;protein_id=WP_063147753.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 391778 392986 . + . ID=gene-VMS06_RS04065;Name=VMS06_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04065 NZ_JAVXZI010000002.1 Protein Homology CDS 391778 392986 . + 0 ID=cds-WP_180240223.1;Parent=gene-VMS06_RS04065;Dbxref=GenBank:WP_180240223.1;Name=WP_180240223.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572420.1;locus_tag=VMS06_RS04065;product=MFS transporter;protein_id=WP_180240223.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 392983 393780 . - . ID=gene-VMS06_RS04070;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=VMS06_RS04070 NZ_JAVXZI010000002.1 Protein Homology CDS 392983 393780 . - 0 ID=cds-WP_063147754.1;Parent=gene-VMS06_RS04070;Dbxref=GenBank:WP_063147754.1;Name=WP_063147754.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310801.2;locus_tag=VMS06_RS04070;product=DgsA anti-repressor MtfA;protein_id=WP_063147754.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 394047 394949 . + . ID=gene-VMS06_RS04075;Name=psrA;gbkey=Gene;gene=psrA;gene_biotype=protein_coding;locus_tag=VMS06_RS04075 NZ_JAVXZI010000002.1 Protein Homology CDS 394047 394949 . + 0 ID=cds-WP_023300505.1;Parent=gene-VMS06_RS04075;Dbxref=GenBank:WP_023300505.1;Name=WP_023300505.1;Ontology_term=GO:2000142,GO:0003700,GO:1901973;gbkey=CDS;gene=psrA;go_function=DNA-binding transcription factor activity|0003700||IEA,proline binding|1901973||IEA;go_process=regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859540.1;locus_tag=VMS06_RS04075;product=L-proline-binding transcription factor PsrA;protein_id=WP_023300505.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 394921 395709 . - . ID=gene-VMS06_RS04080;Name=VMS06_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04080 NZ_JAVXZI010000002.1 Protein Homology CDS 394921 395709 . - 0 ID=cds-WP_063147755.1;Parent=gene-VMS06_RS04080;Dbxref=GenBank:WP_063147755.1;Name=WP_063147755.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572421.1;locus_tag=VMS06_RS04080;product=substrate-binding domain-containing protein;protein_id=WP_063147755.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 395716 397017 . - . ID=gene-VMS06_RS04085;Name=tcuC;gbkey=Gene;gene=tcuC;gene_biotype=protein_coding;locus_tag=VMS06_RS04085 NZ_JAVXZI010000002.1 Protein Homology CDS 395716 397017 . - 0 ID=cds-WP_023300503.1;Parent=gene-VMS06_RS04085;Dbxref=GenBank:WP_023300503.1;Name=WP_023300503.1;gbkey=CDS;gene=tcuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693129.1;locus_tag=VMS06_RS04085;product=MFS transporter;protein_id=WP_023300503.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 397278 398573 . - . ID=gene-VMS06_RS04090;Name=VMS06_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04090 NZ_JAVXZI010000002.1 Protein Homology CDS 397278 398573 . - 0 ID=cds-WP_063147756.1;Parent=gene-VMS06_RS04090;Dbxref=GenBank:WP_063147756.1;Name=WP_063147756.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572422.1;locus_tag=VMS06_RS04090;product=serine hydrolase domain-containing protein;protein_id=WP_063147756.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 398669 399574 . + . ID=gene-VMS06_RS04095;Name=VMS06_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04095 NZ_JAVXZI010000002.1 Protein Homology CDS 398669 399574 . + 0 ID=cds-WP_063147757.1;Parent=gene-VMS06_RS04095;Dbxref=GenBank:WP_063147757.1;Name=WP_063147757.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693131.1;locus_tag=VMS06_RS04095;product=LysR family transcriptional regulator;protein_id=WP_063147757.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 399563 401212 . - . ID=gene-VMS06_RS04100;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=VMS06_RS04100 NZ_JAVXZI010000002.1 Protein Homology CDS 399563 401212 . - 0 ID=cds-WP_063147758.1;Parent=gene-VMS06_RS04100;Dbxref=GenBank:WP_063147758.1;Name=WP_063147758.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859549.1;locus_tag=VMS06_RS04100;product=class I fumarate hydratase FumA;protein_id=WP_063147758.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 401265 402773 . - . ID=gene-VMS06_RS04105;Name=VMS06_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04105 NZ_JAVXZI010000002.1 Protein Homology CDS 401265 402773 . - 0 ID=cds-WP_074133615.1;Parent=gene-VMS06_RS04105;Dbxref=GenBank:WP_074133615.1;Name=WP_074133615.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811177.1;locus_tag=VMS06_RS04105;product=anion permease;protein_id=WP_074133615.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 403382 406162 . + . ID=gene-VMS06_RS04110;Name=VMS06_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04110 NZ_JAVXZI010000002.1 Protein Homology CDS 403382 406162 . + 0 ID=cds-WP_063147759.1;Parent=gene-VMS06_RS04110;Dbxref=GenBank:WP_063147759.1;Name=WP_063147759.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572425.1;locus_tag=VMS06_RS04110;product=flavocytochrome c;protein_id=WP_063147759.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 406221 407183 . + . ID=gene-VMS06_RS04115;Name=VMS06_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04115 NZ_JAVXZI010000002.1 Protein Homology CDS 406221 407183 . + 0 ID=cds-WP_063147760.1;Parent=gene-VMS06_RS04115;Dbxref=GenBank:WP_063147760.1;Name=WP_063147760.1;Ontology_term=GO:0017013,GO:0016740,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA,metal ion binding|0046872||IEA;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572426.1;locus_tag=VMS06_RS04115;product=FAD:protein FMN transferase;protein_id=WP_063147760.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 407164 407883 . - . ID=gene-VMS06_RS04120;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=VMS06_RS04120 NZ_JAVXZI010000002.1 Protein Homology CDS 407164 407883 . - 0 ID=cds-WP_063147761.1;Parent=gene-VMS06_RS04120;Dbxref=GenBank:WP_063147761.1;Name=WP_063147761.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226759.1;locus_tag=VMS06_RS04120;product=two-component system response regulator DcuR;protein_id=WP_063147761.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 407880 409496 . - . ID=gene-VMS06_RS04125;Name=VMS06_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04125 NZ_JAVXZI010000002.1 Protein Homology CDS 407880 409496 . - 0 ID=cds-WP_045308599.1;Parent=gene-VMS06_RS04125;Dbxref=GenBank:WP_045308599.1;Name=WP_045308599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884413.1;locus_tag=VMS06_RS04125;product=sensor histidine kinase;protein_id=WP_045308599.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 409650 410513 . + . ID=gene-VMS06_RS04130;Name=VMS06_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04130 NZ_JAVXZI010000002.1 Protein Homology CDS 409650 410513 . + 0 ID=cds-WP_023300495.1;Parent=gene-VMS06_RS04130;Dbxref=GenBank:WP_023300495.1;Name=WP_023300495.1;Ontology_term=GO:0005975,GO:0046348,GO:0097173,GO:0016835,GO:0097367;gbkey=CDS;go_function=carbon-oxygen lyase activity|0016835||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA,amino sugar catabolic process|0046348||IEA,N-acetylmuramic acid catabolic process|0097173||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884412.1;locus_tag=VMS06_RS04130;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_023300495.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 410569 411735 . - . ID=gene-VMS06_RS04135;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=VMS06_RS04135 NZ_JAVXZI010000002.1 Protein Homology CDS 410569 411735 . - 0 ID=cds-WP_023300494.1;Parent=gene-VMS06_RS04135;Dbxref=GenBank:WP_023300494.1;Name=WP_023300494.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020218947.1;locus_tag=VMS06_RS04135;product=porin OmpC;protein_id=WP_023300494.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 412020 412721 . + . ID=gene-VMS06_RS04140;Name=VMS06_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04140 NZ_JAVXZI010000002.1 Protein Homology CDS 412020 412721 . + 0 ID=cds-WP_023306528.1;Parent=gene-VMS06_RS04140;Dbxref=GenBank:WP_023306528.1;Name=WP_023306528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859564.1;locus_tag=VMS06_RS04140;product=phosphohydrolase;protein_id=WP_023306528.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 412765 414198 . + . ID=gene-VMS06_RS04145;Name=VMS06_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04145 NZ_JAVXZI010000002.1 Protein Homology CDS 412765 414198 . + 0 ID=cds-WP_100148665.1;Parent=gene-VMS06_RS04145;Dbxref=GenBank:WP_100148665.1;Name=WP_100148665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811168.1;locus_tag=VMS06_RS04145;product=DNA cytosine methyltransferase;protein_id=WP_100148665.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 414179 414670 . + . ID=gene-VMS06_RS04150;Name=VMS06_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04150 NZ_JAVXZI010000002.1 Protein Homology CDS 414179 414670 . + 0 ID=cds-WP_022648562.1;Parent=gene-VMS06_RS04150;Dbxref=GenBank:WP_022648562.1;Name=WP_022648562.1;Ontology_term=GO:0006298,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007670299.1;locus_tag=VMS06_RS04150;product=very short patch repair endonuclease;protein_id=WP_022648562.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 414642 415556 . - . ID=gene-VMS06_RS04155;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=VMS06_RS04155 NZ_JAVXZI010000002.1 Protein Homology CDS 414642 415556 . - 0 ID=cds-WP_058646935.1;Parent=gene-VMS06_RS04155;Dbxref=GenBank:WP_058646935.1;Name=WP_058646935.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859569.1;locus_tag=VMS06_RS04155;product=drug/metabolite exporter YedA;protein_id=WP_058646935.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 415732 416646 . + . ID=gene-VMS06_RS04160;Name=VMS06_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04160 NZ_JAVXZI010000002.1 Protein Homology CDS 415732 416646 . + 0 ID=cds-WP_169441341.1;Parent=gene-VMS06_RS04160;Dbxref=GenBank:WP_169441341.1;Name=WP_169441341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416467.1;locus_tag=VMS06_RS04160;product=DUF808 family protein;protein_id=WP_169441341.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 416724 416906 . + . ID=gene-VMS06_RS04165;Name=VMS06_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04165 NZ_JAVXZI010000002.1 Protein Homology CDS 416724 416906 . + 0 ID=cds-WP_022648559.1;Parent=gene-VMS06_RS04165;Dbxref=GenBank:WP_022648559.1;Name=WP_022648559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832486.1;locus_tag=VMS06_RS04165;product=YodC family protein;protein_id=WP_022648559.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 416991 418691 . + . ID=gene-VMS06_RS04170;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=VMS06_RS04170 NZ_JAVXZI010000002.1 Protein Homology CDS 416991 418691 . + 0 ID=cds-WP_063147763.1;Parent=gene-VMS06_RS04170;Dbxref=GenBank:WP_063147763.1;Name=WP_063147763.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383337.1;locus_tag=VMS06_RS04170;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_063147763.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 418676 419476 . - . ID=gene-VMS06_RS04175;Name=VMS06_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04175 NZ_JAVXZI010000002.1 Protein Homology CDS 418676 419476 . - 0 ID=cds-WP_063146287.1;Parent=gene-VMS06_RS04175;Dbxref=GenBank:WP_063146287.1;Name=WP_063146287.1;Ontology_term=GO:0051479,GO:0050531;gbkey=CDS;go_function=mannosyl-3-phosphoglycerate phosphatase activity|0050531||IEA;go_process=mannosylglycerate biosynthetic process|0051479||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383338.1;locus_tag=VMS06_RS04175;product=mannosyl-3-phosphoglycerate phosphatase-related protein;protein_id=WP_063146287.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 419773 420000 . - . ID=gene-VMS06_RS04180;Name=yodD;gbkey=Gene;gene=yodD;gene_biotype=protein_coding;locus_tag=VMS06_RS04180 NZ_JAVXZI010000002.1 Protein Homology CDS 419773 420000 . - 0 ID=cds-WP_017383339.1;Parent=gene-VMS06_RS04180;Dbxref=GenBank:WP_017383339.1;Name=WP_017383339.1;gbkey=CDS;gene=yodD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416463.4;locus_tag=VMS06_RS04180;product=YodD family peroxide/acid resistance protein;protein_id=WP_017383339.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 420129 420317 . + . ID=gene-VMS06_RS04185;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=VMS06_RS04185 NZ_JAVXZI010000002.1 Protein Homology CDS 420129 420317 . + 0 ID=cds-WP_003859583.1;Parent=gene-VMS06_RS04185;Dbxref=GenBank:WP_003859583.1;Name=WP_003859583.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310718.1;locus_tag=VMS06_RS04185;product=protein DsrB;protein_id=WP_003859583.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 420416 421039 . - . ID=gene-VMS06_RS04190;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=VMS06_RS04190 NZ_JAVXZI010000002.1 Protein Homology CDS 420416 421039 . - 0 ID=cds-WP_022648556.1;Parent=gene-VMS06_RS04190;Dbxref=GenBank:WP_022648556.1;Name=WP_022648556.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310717.1;locus_tag=VMS06_RS04190;product=transcriptional regulator RcsA;protein_id=WP_022648556.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq pseudogene 421330 422122 . - . ID=gene-VMS06_RS04195;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=pseudogene;locus_tag=VMS06_RS04195;partial=true;pseudo=true;start_range=.,421330 NZ_JAVXZI010000002.1 Protein Homology CDS 421330 422122 . - 0 ID=cds-VMS06_RS04195;Parent=gene-VMS06_RS04195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460934.1;locus_tag=VMS06_RS04195;partial=true;product=flagellar biosynthetic protein FliR;pseudo=true;start_range=.,421330;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 422129 422398 . - . ID=gene-VMS06_RS04200;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=VMS06_RS04200 NZ_JAVXZI010000002.1 Protein Homology CDS 422129 422398 . - 0 ID=cds-WP_003859587.1;Parent=gene-VMS06_RS04200;Dbxref=GenBank:WP_003859587.1;Name=WP_003859587.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365797.1;locus_tag=VMS06_RS04200;product=flagellar biosynthesis protein FliQ;protein_id=WP_003859587.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 422409 423146 . - . ID=gene-VMS06_RS04205;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=VMS06_RS04205 NZ_JAVXZI010000002.1 Protein Homology CDS 422409 423146 . - 0 ID=cds-WP_022648554.1;Parent=gene-VMS06_RS04205;Dbxref=GenBank:WP_022648554.1;Name=WP_022648554.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460932.1;locus_tag=VMS06_RS04205;product=flagellar type III secretion system pore protein FliP;protein_id=WP_022648554.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 423146 423520 . - . ID=gene-VMS06_RS04210;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=VMS06_RS04210 NZ_JAVXZI010000002.1 Protein Homology CDS 423146 423520 . - 0 ID=cds-WP_022648553.1;Parent=gene-VMS06_RS04210;Dbxref=GenBank:WP_022648553.1;Name=WP_022648553.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003839077.1;locus_tag=VMS06_RS04210;product=flagellar biosynthetic protein FliO;protein_id=WP_022648553.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 423523 423936 . - . ID=gene-VMS06_RS04215;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=VMS06_RS04215 NZ_JAVXZI010000002.1 Protein Homology CDS 423523 423936 . - 0 ID=cds-WP_003859592.1;Parent=gene-VMS06_RS04215;Dbxref=GenBank:WP_003859592.1;Name=WP_003859592.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460930.1;locus_tag=VMS06_RS04215;product=flagellar motor switch protein FliN;protein_id=WP_003859592.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 423933 424937 . - . ID=gene-VMS06_RS04220;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=VMS06_RS04220 NZ_JAVXZI010000002.1 Protein Homology CDS 423933 424937 . - 0 ID=cds-WP_006811158.1;Parent=gene-VMS06_RS04220;Dbxref=GenBank:WP_006811158.1;Name=WP_006811158.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127760.1;locus_tag=VMS06_RS04220;product=flagellar motor switch protein FliM;protein_id=WP_006811158.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 424942 425412 . - . ID=gene-VMS06_RS04225;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=VMS06_RS04225 NZ_JAVXZI010000002.1 Protein Homology CDS 424942 425412 . - 0 ID=cds-WP_003859598.1;Parent=gene-VMS06_RS04225;Dbxref=GenBank:WP_003859598.1;Name=WP_003859598.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460928.1;locus_tag=VMS06_RS04225;product=flagellar basal body-associated protein FliL;protein_id=WP_003859598.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 425519 426733 . - . ID=gene-VMS06_RS04230;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=VMS06_RS04230 NZ_JAVXZI010000002.1 Protein Homology CDS 425519 426733 . - 0 ID=cds-WP_063147764.1;Parent=gene-VMS06_RS04230;Dbxref=GenBank:WP_063147764.1;Name=WP_063147764.1;Ontology_term=GO:0044780,GO:0009424;gbkey=CDS;gene=fliK;go_component=bacterial-type flagellum hook|0009424||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693143.1;locus_tag=VMS06_RS04230;product=flagellar hook length control protein FliK;protein_id=WP_063147764.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 426730 427173 . - . ID=gene-VMS06_RS04235;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=VMS06_RS04235 NZ_JAVXZI010000002.1 Protein Homology CDS 426730 427173 . - 0 ID=cds-WP_006811155.1;Parent=gene-VMS06_RS04235;Dbxref=GenBank:WP_006811155.1;Name=WP_006811155.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460926.1;locus_tag=VMS06_RS04235;product=flagellar export protein FliJ;protein_id=WP_006811155.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 427195 428565 . - . ID=gene-VMS06_RS04240;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=VMS06_RS04240 NZ_JAVXZI010000002.1 Protein Homology CDS 427195 428565 . - 0 ID=cds-WP_032624018.1;Parent=gene-VMS06_RS04240;Dbxref=GenBank:WP_032624018.1;Name=WP_032624018.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500325.1;locus_tag=VMS06_RS04240;product=flagellar protein export ATPase FliI;protein_id=WP_032624018.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 428565 429272 . - . ID=gene-VMS06_RS04245;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=VMS06_RS04245 NZ_JAVXZI010000002.1 Protein Homology CDS 428565 429272 . - 0 ID=cds-WP_022648550.1;Parent=gene-VMS06_RS04245;Dbxref=GenBank:WP_022648550.1;Name=WP_022648550.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460924.1;locus_tag=VMS06_RS04245;product=flagellar assembly protein FliH;protein_id=WP_022648550.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 429265 430263 . - . ID=gene-VMS06_RS04250;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=VMS06_RS04250 NZ_JAVXZI010000002.1 Protein Homology CDS 429265 430263 . - 0 ID=cds-WP_003859608.1;Parent=gene-VMS06_RS04250;Dbxref=GenBank:WP_003859608.1;Name=WP_003859608.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310705.1;locus_tag=VMS06_RS04250;product=flagellar motor switch protein FliG;protein_id=WP_003859608.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 430256 431938 . - . ID=gene-VMS06_RS04255;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=VMS06_RS04255 NZ_JAVXZI010000002.1 Protein Homology CDS 430256 431938 . - 0 ID=cds-WP_022648549.1;Parent=gene-VMS06_RS04255;Dbxref=GenBank:WP_022648549.1;Name=WP_022648549.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460922.1;locus_tag=VMS06_RS04255;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_022648549.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 432167 432481 . + . ID=gene-VMS06_RS04260;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=VMS06_RS04260 NZ_JAVXZI010000002.1 Protein Homology CDS 432167 432481 . + 0 ID=cds-WP_022648548.1;Parent=gene-VMS06_RS04260;Dbxref=GenBank:WP_022648548.1;Name=WP_022648548.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959530.1;locus_tag=VMS06_RS04260;product=flagellar hook-basal body complex protein FliE;protein_id=WP_022648548.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 432508 433803 . - . ID=gene-VMS06_RS04265;Name=VMS06_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04265 NZ_JAVXZI010000002.1 Protein Homology CDS 432508 433803 . - 0 ID=cds-WP_063843716.1;Parent=gene-VMS06_RS04265;Dbxref=GenBank:WP_063843716.1;Name=WP_063843716.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003844207.1;locus_tag=VMS06_RS04265;product=tyrosine-type recombinase/integrase;protein_id=WP_063843716.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 433849 434094 . - . ID=gene-VMS06_RS04270;Name=VMS06_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04270 NZ_JAVXZI010000002.1 Protein Homology CDS 433849 434094 . - 0 ID=cds-WP_014070846.1;Parent=gene-VMS06_RS04270;Dbxref=GenBank:WP_014070846.1;Name=WP_014070846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176205.1;locus_tag=VMS06_RS04270;product=excisionase family protein;protein_id=WP_014070846.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 434197 434382 . - . ID=gene-VMS06_RS04275;Name=VMS06_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04275 NZ_JAVXZI010000002.1 Protein Homology CDS 434197 434382 . - 0 ID=cds-WP_074174032.1;Parent=gene-VMS06_RS04275;Dbxref=GenBank:WP_074174032.1;Name=WP_074174032.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016343.6;locus_tag=VMS06_RS04275;product=DUF551 domain-containing protein;protein_id=WP_074174032.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 434392 434631 . - . ID=gene-VMS06_RS04280;Name=VMS06_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04280 NZ_JAVXZI010000002.1 Protein Homology CDS 434392 434631 . - 0 ID=cds-WP_063843717.1;Parent=gene-VMS06_RS04280;Dbxref=GenBank:WP_063843717.1;Name=WP_063843717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514146.1;locus_tag=VMS06_RS04280;product=DUF4222 domain-containing protein;protein_id=WP_063843717.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 434609 435205 . - . ID=gene-VMS06_RS04285;Name=VMS06_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04285 NZ_JAVXZI010000002.1 Protein Homology CDS 434609 435205 . - 0 ID=cds-WP_063843772.1;Parent=gene-VMS06_RS04285;Dbxref=GenBank:WP_063843772.1;Name=WP_063843772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103069.1;locus_tag=VMS06_RS04285;product=ASCH domain-containing protein;protein_id=WP_063843772.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 435217 435438 . - . ID=gene-VMS06_RS04290;Name=VMS06_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04290 NZ_JAVXZI010000002.1 Protein Homology CDS 435217 435438 . - 0 ID=cds-WP_063843718.1;Parent=gene-VMS06_RS04290;Dbxref=GenBank:WP_063843718.1;Name=WP_063843718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514148.1;locus_tag=VMS06_RS04290;product=TraR/DksA family transcriptional regulator;protein_id=WP_063843718.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 435530 435721 . - . ID=gene-VMS06_RS04295;Name=VMS06_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04295 NZ_JAVXZI010000002.1 Protein Homology CDS 435530 435721 . - 0 ID=cds-WP_058660838.1;Parent=gene-VMS06_RS04295;Dbxref=GenBank:WP_058660838.1;Name=WP_058660838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514149.1;locus_tag=VMS06_RS04295;product=DUF1382 family protein;protein_id=WP_058660838.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 435718 436035 . - . ID=gene-VMS06_RS04300;Name=VMS06_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04300 NZ_JAVXZI010000002.1 Protein Homology CDS 435718 436035 . - 0 ID=cds-WP_063843719.1;Parent=gene-VMS06_RS04300;Dbxref=GenBank:WP_063843719.1;Name=WP_063843719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809798.1;locus_tag=VMS06_RS04300;product=hypothetical protein;protein_id=WP_063843719.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 436032 436250 . - . ID=gene-VMS06_RS04305;Name=VMS06_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04305 NZ_JAVXZI010000002.1 Protein Homology CDS 436032 436250 . - 0 ID=cds-WP_023300422.1;Parent=gene-VMS06_RS04305;Dbxref=GenBank:WP_023300422.1;Name=WP_023300422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001856442.1;locus_tag=VMS06_RS04305;product=hypothetical protein;protein_id=WP_023300422.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 436247 436906 . - . ID=gene-VMS06_RS04310;Name=VMS06_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04310 NZ_JAVXZI010000002.1 Protein Homology CDS 436247 436906 . - 0 ID=cds-WP_063843720.1;Parent=gene-VMS06_RS04310;Dbxref=GenBank:WP_063843720.1;Name=WP_063843720.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809795.1;locus_tag=VMS06_RS04310;product=MT-A70 family methyltransferase;protein_id=WP_063843720.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 436903 437367 . - . ID=gene-VMS06_RS04315;Name=VMS06_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04315 NZ_JAVXZI010000002.1 GeneMarkS-2+ CDS 436903 437367 . - 0 ID=cds-WP_063843721.1;Parent=gene-VMS06_RS04315;Dbxref=GenBank:WP_063843721.1;Name=WP_063843721.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS04315;product=hypothetical protein;protein_id=WP_063843721.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 437370 438431 . - . ID=gene-VMS06_RS04320;Name=VMS06_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04320 NZ_JAVXZI010000002.1 Protein Homology CDS 437370 438431 . - 0 ID=cds-WP_063843722.1;Parent=gene-VMS06_RS04320;Dbxref=GenBank:WP_063843722.1;Name=WP_063843722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752715.1;locus_tag=VMS06_RS04320;product=DGQHR domain-containing protein;protein_id=WP_063843722.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 438428 438580 . - . ID=gene-VMS06_RS04325;Name=VMS06_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04325 NZ_JAVXZI010000002.1 Protein Homology CDS 438428 438580 . - 0 ID=cds-WP_063843723.1;Parent=gene-VMS06_RS04325;Dbxref=GenBank:WP_063843723.1;Name=WP_063843723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148437.1;locus_tag=VMS06_RS04325;product=DUF1317 family protein;protein_id=WP_063843723.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 438577 439005 . - . ID=gene-VMS06_RS04330;Name=VMS06_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04330 NZ_JAVXZI010000002.1 Protein Homology CDS 438577 439005 . - 0 ID=cds-WP_063843724.1;Parent=gene-VMS06_RS04330;Dbxref=GenBank:WP_063843724.1;Name=WP_063843724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804412.1;locus_tag=VMS06_RS04330;product=hypothetical protein;protein_id=WP_063843724.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 439002 439619 . - . ID=gene-VMS06_RS04335;Name=VMS06_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04335 NZ_JAVXZI010000002.1 Protein Homology CDS 439002 439619 . - 0 ID=cds-WP_063843725.1;Parent=gene-VMS06_RS04335;Dbxref=GenBank:WP_063843725.1;Name=WP_063843725.1;Ontology_term=GO:0004527,GO:0046872;gbkey=CDS;go_function=exonuclease activity|0004527||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572578.1;locus_tag=VMS06_RS04335;product=lambda exonuclease family protein;protein_id=WP_063843725.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 439616 440362 . - . ID=gene-VMS06_RS04340;Name=bet;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=VMS06_RS04340 NZ_JAVXZI010000002.1 Protein Homology CDS 439616 440362 . - 0 ID=cds-WP_323630610.1;Parent=gene-VMS06_RS04340;Dbxref=GenBank:WP_323630610.1;Name=WP_323630610.1;Ontology_term=GO:0006310;gbkey=CDS;gene=bet;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000100900.1;locus_tag=VMS06_RS04340;product=phage recombination protein Bet;protein_id=WP_323630610.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 440381 440665 . - . ID=gene-VMS06_RS04345;Name=gamL;gbkey=Gene;gene=gamL;gene_biotype=protein_coding;locus_tag=VMS06_RS04345 NZ_JAVXZI010000002.1 Protein Homology CDS 440381 440665 . - 0 ID=cds-WP_063843727.1;Parent=gene-VMS06_RS04345;Dbxref=GenBank:WP_063843727.1;Name=WP_063843727.1;gbkey=CDS;gene=gamL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752706.1;locus_tag=VMS06_RS04345;product=host nuclease inhibitor GamL;protein_id=WP_063843727.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 440738 441172 . - . ID=gene-VMS06_RS04350;Name=VMS06_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04350 NZ_JAVXZI010000002.1 Protein Homology CDS 440738 441172 . - 0 ID=cds-WP_074174033.1;Parent=gene-VMS06_RS04350;Dbxref=GenBank:WP_074174033.1;Name=WP_074174033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383251.1;locus_tag=VMS06_RS04350;product=zinc-finger-containing protein;protein_id=WP_074174033.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 441183 441395 . - . ID=gene-VMS06_RS04355;Name=VMS06_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04355 NZ_JAVXZI010000002.1 Protein Homology CDS 441183 441395 . - 0 ID=cds-WP_063843728.1;Parent=gene-VMS06_RS04355;Dbxref=GenBank:WP_063843728.1;Name=WP_063843728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383252.1;locus_tag=VMS06_RS04355;product=cell division protein FtsZ;protein_id=WP_063843728.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 441392 441550 . - . ID=gene-VMS06_RS04360;Name=VMS06_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04360 NZ_JAVXZI010000002.1 Protein Homology CDS 441392 441550 . - 0 ID=cds-WP_063843729.1;Parent=gene-VMS06_RS04360;Dbxref=GenBank:WP_063843729.1;Name=WP_063843729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000218994.1;locus_tag=VMS06_RS04360;product=hypothetical protein;protein_id=WP_063843729.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 442109 442651 . - . ID=gene-VMS06_RS04365;Name=VMS06_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04365 NZ_JAVXZI010000002.1 Protein Homology CDS 442109 442651 . - 0 ID=cds-WP_058687947.1;Parent=gene-VMS06_RS04365;Dbxref=GenBank:WP_058687947.1;Name=WP_058687947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024784.7;locus_tag=VMS06_RS04365;product=HNH endonuclease;protein_id=WP_058687947.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 442986 443183 . + . ID=gene-VMS06_RS04370;Name=VMS06_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04370 NZ_JAVXZI010000002.1 Protein Homology CDS 442986 443183 . + 0 ID=cds-WP_063843731.1;Parent=gene-VMS06_RS04370;Dbxref=GenBank:WP_063843731.1;Name=WP_063843731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383048.1;locus_tag=VMS06_RS04370;product=hypothetical protein;protein_id=WP_063843731.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 443223 444128 . - . ID=gene-VMS06_RS04375;Name=VMS06_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04375 NZ_JAVXZI010000002.1 Protein Homology CDS 443223 444128 . - 0 ID=cds-WP_032619410.1;Parent=gene-VMS06_RS04375;Dbxref=GenBank:WP_032619410.1;Name=WP_032619410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000026554.1;locus_tag=VMS06_RS04375;product=BstA C-terminal domain-containing protein;protein_id=WP_032619410.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 444194 444904 . - . ID=gene-VMS06_RS04380;Name=VMS06_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04380 NZ_JAVXZI010000002.1 Protein Homology CDS 444194 444904 . - 0 ID=cds-WP_023303585.1;Parent=gene-VMS06_RS04380;Dbxref=GenBank:WP_023303585.1;Name=WP_023303585.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063676.1;locus_tag=VMS06_RS04380;product=LexA family protein;protein_id=WP_023303585.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 445008 445196 . + . ID=gene-VMS06_RS04385;Name=VMS06_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04385 NZ_JAVXZI010000002.1 Protein Homology CDS 445008 445196 . + 0 ID=cds-WP_032619413.1;Parent=gene-VMS06_RS04385;Dbxref=GenBank:WP_032619413.1;Name=WP_032619413.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542631.1;locus_tag=VMS06_RS04385;product=Cro/CI family transcriptional regulator;protein_id=WP_032619413.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 445282 445824 . + . ID=gene-VMS06_RS04390;Name=VMS06_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04390 NZ_JAVXZI010000002.1 Protein Homology CDS 445282 445824 . + 0 ID=cds-WP_063843732.1;Parent=gene-VMS06_RS04390;Dbxref=GenBank:WP_063843732.1;Name=WP_063843732.1;Ontology_term=GO:0050789;gbkey=CDS;go_process=regulation of biological process|0050789||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001752697.1;locus_tag=VMS06_RS04390;product=toxin YdaT domain-containing protein;protein_id=WP_063843732.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 445908 446054 . + . ID=gene-VMS06_RS04400;Name=VMS06_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04400 NZ_JAVXZI010000002.1 Protein Homology CDS 445908 446054 . + 0 ID=cds-WP_015571544.1;Parent=gene-VMS06_RS04400;Dbxref=GenBank:WP_015571544.1;Name=WP_015571544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245453.1;locus_tag=VMS06_RS04400;product=hypothetical protein;protein_id=WP_015571544.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq gene 446047 446946 . + . ID=gene-VMS06_RS04405;Name=VMS06_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04405 NZ_JAVXZI010000002.1 Protein Homology CDS 446047 446946 . + 0 ID=cds-WP_323630611.1;Parent=gene-VMS06_RS04405;Dbxref=GenBank:WP_323630611.1;Name=WP_323630611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001514167.1;locus_tag=VMS06_RS04405;product=DNA replication protein;protein_id=WP_323630611.1;transl_table=11 NZ_JAVXZI010000002.1 RefSeq pseudogene 446936 447526 . + . ID=gene-VMS06_RS04410;Name=VMS06_RS04410;end_range=447526,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS04410;partial=true;pseudo=true NZ_JAVXZI010000002.1 Protein Homology CDS 446936 447526 . + 0 ID=cds-VMS06_RS04410;Parent=gene-VMS06_RS04410;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006260,GO:0003678,GO:0005524;end_range=447526,.;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309217.2;locus_tag=VMS06_RS04410;partial=true;product=DnaB-like helicase N-terminal domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAVXZI010000003.1 1 342511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000003.1 RefSeq region 1 342511 . + . ID=NZ_JAVXZI010000003.1:1..342511;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000003.1 RefSeq gene 260 448 . + . ID=gene-VMS06_RS04415;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=VMS06_RS04415 NZ_JAVXZI010000003.1 Protein Homology CDS 260 448 . + 0 ID=cds-WP_022647850.1;Parent=gene-VMS06_RS04415;Dbxref=GenBank:WP_022647850.1;Name=WP_022647850.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030556.1;locus_tag=VMS06_RS04415;product=hemin uptake protein HemP;protein_id=WP_022647850.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 525 2507 . + . ID=gene-VMS06_RS04420;Name=VMS06_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04420 NZ_JAVXZI010000003.1 Protein Homology CDS 525 2507 . + 0 ID=cds-WP_063147488.1;Parent=gene-VMS06_RS04420;Dbxref=GenBank:WP_063147488.1;Name=WP_063147488.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069914.1;locus_tag=VMS06_RS04420;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_063147488.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 2543 3571 . + . ID=gene-VMS06_RS04425;Name=chuS;gbkey=Gene;gene=chuS;gene_biotype=protein_coding;locus_tag=VMS06_RS04425 NZ_JAVXZI010000003.1 Protein Homology CDS 2543 3571 . + 0 ID=cds-WP_063147662.1;Parent=gene-VMS06_RS04425;Dbxref=GenBank:WP_063147662.1;Name=WP_063147662.1;gbkey=CDS;gene=chuS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312406.1;locus_tag=VMS06_RS04425;product=hematinate-forming heme oxygenase ChuS;protein_id=WP_063147662.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 3568 4386 . + . ID=gene-VMS06_RS04430;Name=VMS06_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04430 NZ_JAVXZI010000003.1 Protein Homology CDS 3568 4386 . + 0 ID=cds-WP_323630612.1;Parent=gene-VMS06_RS04430;Dbxref=GenBank:WP_323630612.1;Name=WP_323630612.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784584.1;locus_tag=VMS06_RS04430;product=heme/hemin ABC transporter substrate-binding protein;protein_id=WP_323630612.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 4386 5378 . + . ID=gene-VMS06_RS04435;Name=VMS06_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04435 NZ_JAVXZI010000003.1 Protein Homology CDS 4386 5378 . + 0 ID=cds-WP_063843773.1;Parent=gene-VMS06_RS04435;Dbxref=GenBank:WP_063843773.1;Name=WP_063843773.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857789.1;locus_tag=VMS06_RS04435;product=FecCD family ABC transporter permease;protein_id=WP_063843773.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 5371 6150 . + . ID=gene-VMS06_RS04440;Name=VMS06_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04440 NZ_JAVXZI010000003.1 Protein Homology CDS 5371 6150 . + 0 ID=cds-WP_063147490.1;Parent=gene-VMS06_RS04440;Dbxref=GenBank:WP_063147490.1;Name=WP_063147490.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120303.1;locus_tag=VMS06_RS04440;product=heme ABC transporter ATP-binding protein;protein_id=WP_063147490.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 6147 7589 . - . ID=gene-VMS06_RS04445;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=VMS06_RS04445 NZ_JAVXZI010000003.1 Protein Homology CDS 6147 7589 . - 0 ID=cds-WP_063147491.1;Parent=gene-VMS06_RS04445;Dbxref=GenBank:WP_063147491.1;Name=WP_063147491.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310440.1;locus_tag=VMS06_RS04445;product=protein adenylyltransferase SelO;protein_id=WP_063147491.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 7651 8364 . - . ID=gene-VMS06_RS04450;Name=VMS06_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04450 NZ_JAVXZI010000003.1 Protein Homology CDS 7651 8364 . - 0 ID=cds-WP_022647843.1;Parent=gene-VMS06_RS04450;Dbxref=GenBank:WP_022647843.1;Name=WP_022647843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384651.1;locus_tag=VMS06_RS04450;product=EAL domain-containing protein;protein_id=WP_022647843.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 8657 9121 . - . ID=gene-VMS06_RS04455;Name=VMS06_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04455 NZ_JAVXZI010000003.1 Protein Homology CDS 8657 9121 . - 0 ID=cds-WP_323630613.1;Parent=gene-VMS06_RS04455;Dbxref=GenBank:WP_323630613.1;Name=WP_323630613.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460309.1;locus_tag=VMS06_RS04455;product=NlpC/P60 family protein;protein_id=WP_323630613.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 9194 9949 . - . ID=gene-VMS06_RS04460;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=VMS06_RS04460 NZ_JAVXZI010000003.1 Protein Homology CDS 9194 9949 . - 0 ID=cds-WP_022647841.1;Parent=gene-VMS06_RS04460;Dbxref=GenBank:WP_022647841.1;Name=WP_022647841.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809072.1;locus_tag=VMS06_RS04460;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_022647841.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 9949 10500 . - . ID=gene-VMS06_RS04465;Name=VMS06_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04465 NZ_JAVXZI010000003.1 Protein Homology CDS 9949 10500 . - 0 ID=cds-WP_063147492.1;Parent=gene-VMS06_RS04465;Dbxref=GenBank:WP_063147492.1;Name=WP_063147492.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460307.1;locus_tag=VMS06_RS04465;product=glutathione peroxidase;protein_id=WP_063147492.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 10534 11514 . - . ID=gene-VMS06_RS04470;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=VMS06_RS04470 NZ_JAVXZI010000003.1 Protein Homology CDS 10534 11514 . - 0 ID=cds-WP_023299909.1;Parent=gene-VMS06_RS04470;Dbxref=GenBank:WP_023299909.1;Name=WP_023299909.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416226.1;locus_tag=VMS06_RS04470;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_023299909.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 11618 11917 . - . ID=gene-VMS06_RS04475;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=VMS06_RS04475 NZ_JAVXZI010000003.1 Protein Homology CDS 11618 11917 . - 0 ID=cds-WP_003857805.1;Parent=gene-VMS06_RS04475;Dbxref=GenBank:WP_003857805.1;Name=WP_003857805.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310446.1;locus_tag=VMS06_RS04475;product=integration host factor subunit alpha;protein_id=WP_003857805.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 11922 14309 . - . ID=gene-VMS06_RS04480;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=VMS06_RS04480 NZ_JAVXZI010000003.1 Protein Homology CDS 11922 14309 . - 0 ID=cds-WP_063147493.1;Parent=gene-VMS06_RS04480;Dbxref=GenBank:WP_063147493.1;Name=WP_063147493.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310447.1;locus_tag=VMS06_RS04480;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_063147493.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 14325 15308 . - . ID=gene-VMS06_RS04485;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=VMS06_RS04485 NZ_JAVXZI010000003.1 Protein Homology CDS 14325 15308 . - 0 ID=cds-WP_063147494.1;Parent=gene-VMS06_RS04485;Dbxref=GenBank:WP_063147494.1;Name=WP_063147494.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=VMS06_RS04485;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_063147494.1;transl_table=11 NZ_JAVXZI010000003.1 cmsearch sequence_feature 15371 15495 . - . ID=id-NZ_JAVXZI010000003.1:15371..15495;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVXZI010000003.1 RefSeq gene 15446 15490 . - . ID=gene-VMS06_RS04490;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=VMS06_RS04490 NZ_JAVXZI010000003.1 Protein Homology CDS 15446 15490 . - 0 ID=cds-WP_001386830.1;Parent=gene-VMS06_RS04490;Dbxref=GenBank:WP_001386830.1;Name=WP_001386830.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=VMS06_RS04490;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 15613 15969 . - . ID=gene-VMS06_RS04495;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=VMS06_RS04495 NZ_JAVXZI010000003.1 Protein Homology CDS 15613 15969 . - 0 ID=cds-WP_000124850.1;Parent=gene-VMS06_RS04495;Dbxref=GenBank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=VMS06_RS04495;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 16020 16217 . - . ID=gene-VMS06_RS04500;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=VMS06_RS04500 NZ_JAVXZI010000003.1 Protein Homology CDS 16020 16217 . - 0 ID=cds-WP_001124225.1;Parent=gene-VMS06_RS04500;Dbxref=GenBank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=VMS06_RS04500;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 16315 16857 . - . ID=gene-VMS06_RS04505;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=VMS06_RS04505 NZ_JAVXZI010000003.1 Protein Homology CDS 16315 16857 . - 0 ID=cds-WP_059443439.1;Parent=gene-VMS06_RS04505;Dbxref=GenBank:WP_059443439.1;Name=WP_059443439.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=VMS06_RS04505;product=translation initiation factor IF-3;protein_id=WP_059443439.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 16861 18789 . - . ID=gene-VMS06_RS04510;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=VMS06_RS04510 NZ_JAVXZI010000003.1 Protein Homology CDS 16861 18789 . - 0 ID=cds-WP_006809077.1;Parent=gene-VMS06_RS04510;Dbxref=GenBank:WP_006809077.1;Name=WP_006809077.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=VMS06_RS04510;product=threonine--tRNA ligase;protein_id=WP_006809077.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 19113 19205 . + . ID=gene-VMS06_RS04515;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=VMS06_RS04515 NZ_JAVXZI010000003.1 Protein Homology CDS 19113 19205 . + 0 ID=cds-WP_071785204.1;Parent=gene-VMS06_RS04515;Dbxref=GenBank:WP_071785204.1;Name=WP_071785204.1;gbkey=CDS;gene=yncL;inference=COORDINATES: protein motif:HMM:NF000537.0;locus_tag=VMS06_RS04515;product=stress response membrane protein YncL;protein_id=WP_071785204.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 19304 19411 . + . ID=gene-VMS06_RS04520;Name=yniD;gbkey=Gene;gene=yniD;gene_biotype=protein_coding;locus_tag=VMS06_RS04520 NZ_JAVXZI010000003.1 Protein Homology CDS 19304 19411 . + 0 ID=cds-WP_003857815.1;Parent=gene-VMS06_RS04520;Dbxref=GenBank:WP_003857815.1;Name=WP_003857815.1;gbkey=CDS;gene=yniD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588455.2;locus_tag=VMS06_RS04520;product=small membrane protein YniD;protein_id=WP_003857815.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 19561 19794 . - . ID=gene-VMS06_RS04525;Name=VMS06_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04525 NZ_JAVXZI010000003.1 Protein Homology CDS 19561 19794 . - 0 ID=cds-WP_032622263.1;Parent=gene-VMS06_RS04525;Dbxref=GenBank:WP_032622263.1;Name=WP_032622263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570736.1;locus_tag=VMS06_RS04525;product=YdgH/BhsA/McbA family protein;protein_id=WP_032622263.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 20059 20817 . - . ID=gene-VMS06_RS04530;Name=VMS06_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04530 NZ_JAVXZI010000003.1 Protein Homology CDS 20059 20817 . - 0 ID=cds-WP_022647833.1;Parent=gene-VMS06_RS04530;Dbxref=GenBank:WP_022647833.1;Name=WP_022647833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310455.1;locus_tag=VMS06_RS04530;product=DUF481 domain-containing protein;protein_id=WP_022647833.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 20823 21095 . - . ID=gene-VMS06_RS04535;Name=VMS06_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04535 NZ_JAVXZI010000003.1 GeneMarkS-2+ CDS 20823 21095 . - 0 ID=cds-WP_022647832.1;Parent=gene-VMS06_RS04535;Dbxref=GenBank:WP_022647832.1;Name=WP_022647832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS04535;product=hypothetical protein;protein_id=WP_022647832.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 21113 22045 . + . ID=gene-VMS06_RS04540;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=VMS06_RS04540 NZ_JAVXZI010000003.1 Protein Homology CDS 21113 22045 . + 0 ID=cds-WP_022647831.1;Parent=gene-VMS06_RS04540;Dbxref=GenBank:WP_022647831.1;Name=WP_022647831.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884409.1;locus_tag=VMS06_RS04540;product=6-phosphofructokinase II;protein_id=WP_022647831.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 22137 22427 . + . ID=gene-VMS06_RS04545;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=VMS06_RS04545 NZ_JAVXZI010000003.1 Protein Homology CDS 22137 22427 . + 0 ID=cds-WP_003857822.1;Parent=gene-VMS06_RS04545;Dbxref=GenBank:WP_003857822.1;Name=WP_003857822.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857822.1;locus_tag=VMS06_RS04545;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_003857822.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 22533 23393 . + . ID=gene-VMS06_RS04550;Name=VMS06_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04550 NZ_JAVXZI010000003.1 Protein Homology CDS 22533 23393 . + 0 ID=cds-WP_048966333.1;Parent=gene-VMS06_RS04550;Dbxref=GenBank:WP_048966333.1;Name=WP_048966333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310458.1;locus_tag=VMS06_RS04550;product=fructosamine kinase family protein;protein_id=WP_048966333.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 23426 23962 . - . ID=gene-VMS06_RS04555;Name=VMS06_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04555 NZ_JAVXZI010000003.1 Protein Homology CDS 23426 23962 . - 0 ID=cds-WP_015570741.1;Parent=gene-VMS06_RS04555;Dbxref=GenBank:WP_015570741.1;Name=WP_015570741.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460289.1;locus_tag=VMS06_RS04555;product=YniB family protein;protein_id=WP_015570741.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 24104 24775 . + . ID=gene-VMS06_RS04560;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=VMS06_RS04560 NZ_JAVXZI010000003.1 Protein Homology CDS 24104 24775 . + 0 ID=cds-WP_022647828.1;Parent=gene-VMS06_RS04560;Dbxref=GenBank:WP_022647828.1;Name=WP_022647828.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809084.1;locus_tag=VMS06_RS04560;product=hexitol phosphatase HxpB;protein_id=WP_022647828.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 24904 25665 . + . ID=gene-VMS06_RS04565;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=VMS06_RS04565 NZ_JAVXZI010000003.1 Protein Homology CDS 24904 25665 . + 0 ID=cds-WP_023299906.1;Parent=gene-VMS06_RS04565;Dbxref=GenBank:WP_023299906.1;Name=WP_023299906.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226440.1;locus_tag=VMS06_RS04565;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_023299906.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 25761 26351 . + . ID=gene-VMS06_RS04570;Name=VMS06_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04570 NZ_JAVXZI010000003.1 Protein Homology CDS 25761 26351 . + 0 ID=cds-WP_015570742.1;Parent=gene-VMS06_RS04570;Dbxref=GenBank:WP_015570742.1;Name=WP_015570742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884412.1;locus_tag=VMS06_RS04570;product=metal-dependent hydrolase;protein_id=WP_015570742.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 26479 27870 . + . ID=gene-VMS06_RS04575;Name=tcyP;gbkey=Gene;gene=tcyP;gene_biotype=protein_coding;locus_tag=VMS06_RS04575 NZ_JAVXZI010000003.1 Protein Homology CDS 26479 27870 . + 0 ID=cds-WP_022647826.1;Parent=gene-VMS06_RS04575;Dbxref=GenBank:WP_022647826.1;Name=WP_022647826.1;gbkey=CDS;gene=tcyP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=VMS06_RS04575;product=cystine/sulfocysteine:cation symporter;protein_id=WP_022647826.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 27919 28158 . - . ID=gene-VMS06_RS04580;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=VMS06_RS04580 NZ_JAVXZI010000003.1 Protein Homology CDS 27919 28158 . - 0 ID=cds-WP_022647825.1;Parent=gene-VMS06_RS04580;Dbxref=GenBank:WP_022647825.1;Name=WP_022647825.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570744.1;locus_tag=VMS06_RS04580;product=cell division activator CedA;protein_id=WP_022647825.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 28360 30609 . + . ID=gene-VMS06_RS04585;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=VMS06_RS04585 NZ_JAVXZI010000003.1 Protein Homology CDS 28360 30609 . + 0 ID=cds-WP_023299905.1;Parent=gene-VMS06_RS04585;Dbxref=GenBank:WP_023299905.1;Name=WP_023299905.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883480.1;locus_tag=VMS06_RS04585;product=catalase HPII;protein_id=WP_023299905.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 30702 31451 . - . ID=gene-VMS06_RS04590;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=VMS06_RS04590 NZ_JAVXZI010000003.1 Protein Homology CDS 30702 31451 . - 0 ID=cds-WP_063147495.1;Parent=gene-VMS06_RS04590;Dbxref=GenBank:WP_063147495.1;Name=WP_063147495.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010430154.1;locus_tag=VMS06_RS04590;product=chitin disaccharide deacetylase;protein_id=WP_063147495.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 31463 32818 . - . ID=gene-VMS06_RS04595;Name=VMS06_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04595 NZ_JAVXZI010000003.1 Protein Homology CDS 31463 32818 . - 0 ID=cds-WP_022647822.1;Parent=gene-VMS06_RS04595;Dbxref=GenBank:WP_022647822.1;Name=WP_022647822.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384662.1;locus_tag=VMS06_RS04595;product=6-phospho-beta-glucosidase;protein_id=WP_022647822.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 32927 33772 . - . ID=gene-VMS06_RS04600;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=VMS06_RS04600 NZ_JAVXZI010000003.1 Protein Homology CDS 32927 33772 . - 0 ID=cds-WP_255248587.1;Parent=gene-VMS06_RS04600;Dbxref=GenBank:WP_255248587.1;Name=WP_255248587.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169676.1;locus_tag=VMS06_RS04600;product=transcriptional regulator ChbR;protein_id=WP_255248587.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 33775 34122 . - . ID=gene-VMS06_RS04605;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=VMS06_RS04605 NZ_JAVXZI010000003.1 Protein Homology CDS 33775 34122 . - 0 ID=cds-WP_022647820.1;Parent=gene-VMS06_RS04605;Dbxref=GenBank:WP_022647820.1;Name=WP_022647820.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226432.1;locus_tag=VMS06_RS04605;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_022647820.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 34170 35528 . - . ID=gene-VMS06_RS04610;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=VMS06_RS04610 NZ_JAVXZI010000003.1 Protein Homology CDS 34170 35528 . - 0 ID=cds-WP_017384664.1;Parent=gene-VMS06_RS04610;Dbxref=GenBank:WP_017384664.1;Name=WP_017384664.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=VMS06_RS04610;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_017384664.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 35609 35932 . - . ID=gene-VMS06_RS04615;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=VMS06_RS04615 NZ_JAVXZI010000003.1 Protein Homology CDS 35609 35932 . - 0 ID=cds-WP_225303350.1;Parent=gene-VMS06_RS04615;Dbxref=GenBank:WP_225303350.1;Name=WP_225303350.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784564.1;locus_tag=VMS06_RS04615;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_225303350.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 36208 36552 . - . ID=gene-VMS06_RS04620;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=VMS06_RS04620 NZ_JAVXZI010000003.1 Protein Homology CDS 36208 36552 . - 0 ID=cds-WP_022647818.1;Parent=gene-VMS06_RS04620;Dbxref=GenBank:WP_022647818.1;Name=WP_022647818.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169673.1;locus_tag=VMS06_RS04620;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_022647818.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 36784 37611 . + . ID=gene-VMS06_RS04625;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=VMS06_RS04625 NZ_JAVXZI010000003.1 Protein Homology CDS 36784 37611 . + 0 ID=cds-WP_022647817.1;Parent=gene-VMS06_RS04625;Dbxref=GenBank:WP_022647817.1;Name=WP_022647817.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460276.1;locus_tag=VMS06_RS04625;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_022647817.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 37727 38605 . + . ID=gene-VMS06_RS04630;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=VMS06_RS04630 NZ_JAVXZI010000003.1 Protein Homology CDS 37727 38605 . + 0 ID=cds-WP_074133504.1;Parent=gene-VMS06_RS04630;Dbxref=GenBank:WP_074133504.1;Name=WP_074133504.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017098.1;locus_tag=VMS06_RS04630;product=excinuclease Cho;protein_id=WP_074133504.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 38583 39140 . - . ID=gene-VMS06_RS04635;Name=ves;gbkey=Gene;gene=ves;gene_biotype=protein_coding;locus_tag=VMS06_RS04635 NZ_JAVXZI010000003.1 Protein Homology CDS 38583 39140 . - 0 ID=cds-WP_022647815.1;Parent=gene-VMS06_RS04635;Dbxref=GenBank:WP_022647815.1;Name=WP_022647815.1;gbkey=CDS;gene=ves;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384666.1;locus_tag=VMS06_RS04635;product=environmental stress-induced protein Ves;protein_id=WP_022647815.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 39308 39802 . - . ID=gene-VMS06_RS04640;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=VMS06_RS04640 NZ_JAVXZI010000003.1 Protein Homology CDS 39308 39802 . - 0 ID=cds-WP_022647814.1;Parent=gene-VMS06_RS04640;Dbxref=GenBank:WP_022647814.1;Name=WP_022647814.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310476.1;locus_tag=VMS06_RS04640;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_022647814.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 40140 41105 . - . ID=gene-VMS06_RS04645;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=VMS06_RS04645 NZ_JAVXZI010000003.1 Protein Homology CDS 40140 41105 . - 0 ID=cds-WP_038415886.1;Parent=gene-VMS06_RS04645;Dbxref=GenBank:WP_038415886.1;Name=WP_038415886.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693597.1;locus_tag=VMS06_RS04645;product=succinylglutamate desuccinylase;protein_id=WP_038415886.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 41115 42440 . - . ID=gene-VMS06_RS04650;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=VMS06_RS04650 NZ_JAVXZI010000003.1 Protein Homology CDS 41115 42440 . - 0 ID=cds-WP_063147497.1;Parent=gene-VMS06_RS04650;Dbxref=GenBank:WP_063147497.1;Name=WP_063147497.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384668.1;locus_tag=VMS06_RS04650;product=N-succinylarginine dihydrolase;protein_id=WP_063147497.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 42427 43914 . - . ID=gene-VMS06_RS04655;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=VMS06_RS04655 NZ_JAVXZI010000003.1 Protein Homology CDS 42427 43914 . - 0 ID=cds-WP_063147498.1;Parent=gene-VMS06_RS04655;Dbxref=GenBank:WP_063147498.1;Name=WP_063147498.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017093.1;locus_tag=VMS06_RS04655;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_063147498.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 43911 44945 . - . ID=gene-VMS06_RS04660;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=VMS06_RS04660 NZ_JAVXZI010000003.1 Protein Homology CDS 43911 44945 . - 0 ID=cds-WP_022647810.1;Parent=gene-VMS06_RS04660;Dbxref=GenBank:WP_022647810.1;Name=WP_022647810.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310480.1;locus_tag=VMS06_RS04660;product=arginine N-succinyltransferase;protein_id=WP_022647810.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 44942 46162 . - . ID=gene-VMS06_RS04665;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;locus_tag=VMS06_RS04665 NZ_JAVXZI010000003.1 Protein Homology CDS 44942 46162 . - 0 ID=cds-WP_058677264.1;Parent=gene-VMS06_RS04665;Dbxref=GenBank:WP_058677264.1;Name=WP_058677264.1;gbkey=CDS;gene=astC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310481.1;locus_tag=VMS06_RS04665;product=succinylornithine/acetylornithine transaminase;protein_id=WP_058677264.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 46596 47402 . + . ID=gene-VMS06_RS04670;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=VMS06_RS04670 NZ_JAVXZI010000003.1 Protein Homology CDS 46596 47402 . + 0 ID=cds-WP_058647218.1;Parent=gene-VMS06_RS04670;Dbxref=GenBank:WP_058647218.1;Name=WP_058647218.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460268.1;locus_tag=VMS06_RS04670;product=exodeoxyribonuclease III;protein_id=WP_058647218.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 47409 48092 . + . ID=gene-VMS06_RS04675;Name=VMS06_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04675 NZ_JAVXZI010000003.1 Protein Homology CDS 47409 48092 . + 0 ID=cds-WP_063843774.1;Parent=gene-VMS06_RS04675;Dbxref=GenBank:WP_063843774.1;Name=WP_063843774.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693601.1;locus_tag=VMS06_RS04675;product=TVP38/TMEM64 family protein;protein_id=WP_063843774.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 48108 49268 . + . ID=gene-VMS06_RS04680;Name=VMS06_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04680 NZ_JAVXZI010000003.1 Protein Homology CDS 48108 49268 . + 0 ID=cds-WP_063147663.1;Parent=gene-VMS06_RS04680;Dbxref=GenBank:WP_063147663.1;Name=WP_063147663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132645.1;locus_tag=VMS06_RS04680;product=ABC transporter substrate-binding protein;protein_id=WP_063147663.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 49241 50770 . + . ID=gene-VMS06_RS04685;Name=VMS06_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04685 NZ_JAVXZI010000003.1 Protein Homology CDS 49241 50770 . + 0 ID=cds-WP_323630614.1;Parent=gene-VMS06_RS04685;Dbxref=GenBank:WP_323630614.1;Name=WP_323630614.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809109.1;locus_tag=VMS06_RS04685;product=ABC transporter permease family protein;protein_id=WP_323630614.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 50770 51390 . + . ID=gene-VMS06_RS04690;Name=VMS06_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04690 NZ_JAVXZI010000003.1 Protein Homology CDS 50770 51390 . + 0 ID=cds-WP_063147501.1;Parent=gene-VMS06_RS04690;Dbxref=GenBank:WP_063147501.1;Name=WP_063147501.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004176522.1;locus_tag=VMS06_RS04690;product=ATP-binding cassette domain-containing protein;protein_id=WP_063147501.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 51464 52771 . + . ID=gene-VMS06_RS04695;Name=VMS06_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04695 NZ_JAVXZI010000003.1 Protein Homology CDS 51464 52771 . + 0 ID=cds-WP_063147664.1;Parent=gene-VMS06_RS04695;Dbxref=GenBank:WP_063147664.1;Name=WP_063147664.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416271.4;locus_tag=VMS06_RS04695;product=sulfurtransferase;protein_id=WP_063147664.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 52768 53385 . - . ID=gene-VMS06_RS04700;Name=VMS06_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04700 NZ_JAVXZI010000003.1 Protein Homology CDS 52768 53385 . - 0 ID=cds-WP_022647802.1;Parent=gene-VMS06_RS04700;Dbxref=GenBank:WP_022647802.1;Name=WP_022647802.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693605.1;locus_tag=VMS06_RS04700;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_022647802.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 53375 53947 . - . ID=gene-VMS06_RS04705;Name=VMS06_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04705 NZ_JAVXZI010000003.1 Protein Homology CDS 53375 53947 . - 0 ID=cds-WP_063147502.1;Parent=gene-VMS06_RS04705;Dbxref=GenBank:WP_063147502.1;Name=WP_063147502.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693606.1;locus_tag=VMS06_RS04705;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_063147502.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 54023 54439 . + . ID=gene-VMS06_RS04710;Name=VMS06_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04710 NZ_JAVXZI010000003.1 Protein Homology CDS 54023 54439 . + 0 ID=cds-WP_022647800.1;Parent=gene-VMS06_RS04710;Dbxref=GenBank:WP_022647800.1;Name=WP_022647800.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693607.1;locus_tag=VMS06_RS04710;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_022647800.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 54399 54671 . - . ID=gene-VMS06_RS04715;Name=VMS06_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04715 NZ_JAVXZI010000003.1 Protein Homology CDS 54399 54671 . - 0 ID=cds-WP_022647799.1;Parent=gene-VMS06_RS04715;Dbxref=GenBank:WP_022647799.1;Name=WP_022647799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693608.1;locus_tag=VMS06_RS04715;product=YnjH family protein;protein_id=WP_022647799.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 54897 56240 . + . ID=gene-VMS06_RS04720;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=VMS06_RS04720 NZ_JAVXZI010000003.1 Protein Homology CDS 54897 56240 . + 0 ID=cds-WP_023305947.1;Parent=gene-VMS06_RS04720;Dbxref=GenBank:WP_023305947.1;Name=WP_023305947.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366584.1;locus_tag=VMS06_RS04720;product=NADP-specific glutamate dehydrogenase;protein_id=WP_023305947.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 56355 58277 . - . ID=gene-VMS06_RS04725;Name=VMS06_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04725 NZ_JAVXZI010000003.1 Protein Homology CDS 56355 58277 . - 0 ID=cds-WP_063147503.1;Parent=gene-VMS06_RS04725;Dbxref=GenBank:WP_063147503.1;Name=WP_063147503.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384681.1;locus_tag=VMS06_RS04725;product=DNA topoisomerase III;protein_id=WP_063147503.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 58282 59325 . - . ID=gene-VMS06_RS04730;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=VMS06_RS04730 NZ_JAVXZI010000003.1 Protein Homology CDS 58282 59325 . - 0 ID=cds-WP_063147504.1;Parent=gene-VMS06_RS04730;Dbxref=GenBank:WP_063147504.1;Name=WP_063147504.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=L-selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226401.1;locus_tag=VMS06_RS04730;product=selenide%2C water dikinase SelD;protein_id=WP_063147504.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 59442 59993 . - . ID=gene-VMS06_RS04735;Name=VMS06_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04735 NZ_JAVXZI010000003.1 Protein Homology CDS 59442 59993 . - 0 ID=cds-WP_022647795.1;Parent=gene-VMS06_RS04735;Dbxref=GenBank:WP_022647795.1;Name=WP_022647795.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460262.1;locus_tag=VMS06_RS04735;product=NAD(P)H nitroreductase;protein_id=WP_022647795.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 60161 62017 . + . ID=gene-VMS06_RS04740;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=VMS06_RS04740 NZ_JAVXZI010000003.1 Protein Homology CDS 60161 62017 . + 0 ID=cds-WP_063147505.1;Parent=gene-VMS06_RS04740;Dbxref=GenBank:WP_063147505.1;Name=WP_063147505.1;Ontology_term=GO:0051604,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310499.1;locus_tag=VMS06_RS04740;product=signal peptide peptidase SppA;protein_id=WP_063147505.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 62080 63108 . + . ID=gene-VMS06_RS04745;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=VMS06_RS04745 NZ_JAVXZI010000003.1 Protein Homology CDS 62080 63108 . + 0 ID=cds-WP_063147506.1;Parent=gene-VMS06_RS04745;Dbxref=GenBank:WP_063147506.1;Name=WP_063147506.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310501.1;locus_tag=VMS06_RS04745;product=asparaginase;protein_id=WP_063147506.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 63105 63746 . + . ID=gene-VMS06_RS04750;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=VMS06_RS04750 NZ_JAVXZI010000003.1 Protein Homology CDS 63105 63746 . + 0 ID=cds-WP_063147507.1;Parent=gene-VMS06_RS04750;Dbxref=GenBank:WP_063147507.1;Name=WP_063147507.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857861.1;locus_tag=VMS06_RS04750;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_063147507.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 63971 65224 . + . ID=gene-VMS06_RS04755;Name=chiD;gbkey=Gene;gene=chiD;gene_biotype=protein_coding;locus_tag=VMS06_RS04755 NZ_JAVXZI010000003.1 Protein Homology CDS 63971 65224 . + 0 ID=cds-WP_063843775.1;Parent=gene-VMS06_RS04755;Dbxref=GenBank:WP_063843775.1;Name=WP_063843775.1;Ontology_term=GO:0006032;gbkey=CDS;gene=chiD;go_process=chitin catabolic process|0006032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226384.1;locus_tag=VMS06_RS04755;product=chitinase ChiD;protein_id=WP_063843775.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 65276 65548 . - . ID=gene-VMS06_RS04760;Name=VMS06_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04760 NZ_JAVXZI010000003.1 Protein Homology CDS 65276 65548 . - 0 ID=cds-WP_058647223.1;Parent=gene-VMS06_RS04760;Dbxref=GenBank:WP_058647223.1;Name=WP_058647223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570779.1;locus_tag=VMS06_RS04760;product=YeaC family protein;protein_id=WP_058647223.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 65590 66003 . - . ID=gene-VMS06_RS04765;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=VMS06_RS04765 NZ_JAVXZI010000003.1 Protein Homology CDS 65590 66003 . - 0 ID=cds-WP_022647790.1;Parent=gene-VMS06_RS04765;Dbxref=GenBank:WP_022647790.1;Name=WP_022647790.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097052.1;locus_tag=VMS06_RS04765;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_022647790.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 66345 67340 . + . ID=gene-VMS06_RS04770;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=VMS06_RS04770 NZ_JAVXZI010000003.1 Protein Homology CDS 66345 67340 . + 0 ID=cds-WP_006809136.1;Parent=gene-VMS06_RS04770;Dbxref=GenBank:WP_006809136.1;Name=WP_006809136.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=VMS06_RS04770;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_006809136.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 67415 68299 . + . ID=gene-VMS06_RS04775;Name=VMS06_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04775 NZ_JAVXZI010000003.1 Protein Homology CDS 67415 68299 . + 0 ID=cds-WP_063147540.1;Parent=gene-VMS06_RS04775;Dbxref=GenBank:WP_063147540.1;Name=WP_063147540.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460255.1;locus_tag=VMS06_RS04775;product=D-hexose-6-phosphate mutarotase;protein_id=WP_063147540.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 68366 69112 . - . ID=gene-VMS06_RS04780;Name=VMS06_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04780 NZ_JAVXZI010000003.1 Protein Homology CDS 68366 69112 . - 0 ID=cds-WP_023299885.1;Parent=gene-VMS06_RS04780;Dbxref=GenBank:WP_023299885.1;Name=WP_023299885.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901236.1;locus_tag=VMS06_RS04780;product=MipA/OmpV family protein;protein_id=WP_023299885.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 69545 71479 . + . ID=gene-VMS06_RS04785;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=VMS06_RS04785 NZ_JAVXZI010000003.1 Protein Homology CDS 69545 71479 . + 0 ID=cds-WP_006809140.1;Parent=gene-VMS06_RS04785;Dbxref=GenBank:WP_006809140.1;Name=WP_006809140.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011411173.1;locus_tag=VMS06_RS04785;product=protein kinase YeaG;protein_id=WP_006809140.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 71569 72852 . + . ID=gene-VMS06_RS04790;Name=VMS06_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04790 NZ_JAVXZI010000003.1 Protein Homology CDS 71569 72852 . + 0 ID=cds-WP_017384692.1;Parent=gene-VMS06_RS04790;Dbxref=GenBank:WP_017384692.1;Name=WP_017384692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017065.1;locus_tag=VMS06_RS04790;product=YeaH/YhbH family protein;protein_id=WP_017384692.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 72952 73452 . + . ID=gene-VMS06_RS04795;Name=VMS06_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04795 NZ_JAVXZI010000003.1 Protein Homology CDS 72952 73452 . + 0 ID=cds-WP_023305892.1;Parent=gene-VMS06_RS04795;Dbxref=GenBank:WP_023305892.1;Name=WP_023305892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809196.1;locus_tag=VMS06_RS04795;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_023305892.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 73473 73574 . - . ID=gene-VMS06_RS04800;Name=yoaI;gbkey=Gene;gene=yoaI;gene_biotype=protein_coding;locus_tag=VMS06_RS04800 NZ_JAVXZI010000003.1 Protein Homology CDS 73473 73574 . - 0 ID=cds-WP_017384693.1;Parent=gene-VMS06_RS04800;Dbxref=GenBank:WP_017384693.1;Name=WP_017384693.1;gbkey=CDS;gene=yoaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384693.1;locus_tag=VMS06_RS04800;product=small membrane protein YoaI;protein_id=WP_017384693.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 73861 75192 . + . ID=gene-VMS06_RS04805;Name=VMS06_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04805 NZ_JAVXZI010000003.1 Protein Homology CDS 73861 75192 . + 0 ID=cds-WP_063147576.1;Parent=gene-VMS06_RS04805;Dbxref=GenBank:WP_063147576.1;Name=WP_063147576.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857879.1;locus_tag=VMS06_RS04805;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_063147576.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 75208 77244 . + . ID=gene-VMS06_RS04810;Name=VMS06_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04810 NZ_JAVXZI010000003.1 Protein Homology CDS 75208 77244 . + 0 ID=cds-WP_323630615.1;Parent=gene-VMS06_RS04810;Dbxref=GenBank:WP_323630615.1;Name=WP_323630615.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693613.1;locus_tag=VMS06_RS04810;product=glycoside hydrolase family 31 protein;protein_id=WP_323630615.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 77351 77797 . + . ID=gene-VMS06_RS04815;Name=VMS06_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04815 NZ_JAVXZI010000003.1 Protein Homology CDS 77351 77797 . + 0 ID=cds-WP_003857881.1;Parent=gene-VMS06_RS04815;Dbxref=GenBank:WP_003857881.1;Name=WP_003857881.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226359.1;locus_tag=VMS06_RS04815;product=DUF441 domain-containing protein;protein_id=WP_003857881.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 77781 78572 . - . ID=gene-VMS06_RS04820;Name=VMS06_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04820 NZ_JAVXZI010000003.1 Protein Homology CDS 77781 78572 . - 0 ID=cds-WP_063147578.1;Parent=gene-VMS06_RS04820;Dbxref=GenBank:WP_063147578.1;Name=WP_063147578.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384695.1;locus_tag=VMS06_RS04820;product=AraC family transcriptional regulator;protein_id=WP_063147578.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 78672 79859 . + . ID=gene-VMS06_RS04825;Name=VMS06_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04825 NZ_JAVXZI010000003.1 Protein Homology CDS 78672 79859 . + 0 ID=cds-WP_023305888.1;Parent=gene-VMS06_RS04825;Dbxref=GenBank:WP_023305888.1;Name=WP_023305888.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010430048.1;locus_tag=VMS06_RS04825;product=CynX/NimT family MFS transporter;protein_id=WP_023305888.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 79891 80598 . - . ID=gene-VMS06_RS04830;Name=VMS06_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04830 NZ_JAVXZI010000003.1 Protein Homology CDS 79891 80598 . - 0 ID=cds-WP_323630616.1;Parent=gene-VMS06_RS04830;Dbxref=GenBank:WP_323630616.1;Name=WP_323630616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500740.1;locus_tag=VMS06_RS04830;product=CTP synthase C-terminal region-related (seleno)protein;protein_id=WP_323630616.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 80749 81093 . + . ID=gene-VMS06_RS04835;Name=VMS06_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04835 NZ_JAVXZI010000003.1 Protein Homology CDS 80749 81093 . + 0 ID=cds-WP_063147579.1;Parent=gene-VMS06_RS04835;Dbxref=GenBank:WP_063147579.1;Name=WP_063147579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857886.1;locus_tag=VMS06_RS04835;product=DUF488 domain-containing protein;protein_id=WP_063147579.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 81094 81399 . - . ID=gene-VMS06_RS04840;Name=VMS06_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04840 NZ_JAVXZI010000003.1 Protein Homology CDS 81094 81399 . - 0 ID=cds-WP_022647778.1;Parent=gene-VMS06_RS04840;Dbxref=GenBank:WP_022647778.1;Name=WP_022647778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570790.1;locus_tag=VMS06_RS04840;product=hypothetical protein;protein_id=WP_022647778.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 81480 81734 . - . ID=gene-VMS06_RS04845;Name=VMS06_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04845 NZ_JAVXZI010000003.1 Protein Homology CDS 81480 81734 . - 0 ID=cds-WP_015570791.1;Parent=gene-VMS06_RS04845;Dbxref=GenBank:WP_015570791.1;Name=WP_015570791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570791.1;locus_tag=VMS06_RS04845;product=putative hemolysin;protein_id=WP_015570791.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 82048 83076 . + . ID=gene-VMS06_RS04850;Name=VMS06_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04850 NZ_JAVXZI010000003.1 Protein Homology CDS 82048 83076 . + 0 ID=cds-WP_063147580.1;Parent=gene-VMS06_RS04850;Dbxref=GenBank:WP_063147580.1;Name=WP_063147580.1;Ontology_term=GO:0007165,GO:0005515,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=protein binding|0005515||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570792.1;locus_tag=VMS06_RS04850;product=sensor domain-containing diguanylate cyclase;protein_id=WP_063147580.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 83122 83220 . + . ID=gene-VMS06_RS04855;Name=VMS06_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04855 NZ_JAVXZI010000003.1 Protein Homology CDS 83122 83220 . + 0 ID=cds-WP_015570793.1;Parent=gene-VMS06_RS04855;Dbxref=GenBank:WP_015570793.1;Name=WP_015570793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791242.1;locus_tag=VMS06_RS04855;product=YoaK family small membrane protein;protein_id=WP_015570793.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 83221 83295 . + . ID=gene-VMS06_RS22855;Name=yoaJ;gbkey=Gene;gene=yoaJ;gene_biotype=protein_coding;locus_tag=VMS06_RS22855 NZ_JAVXZI010000003.1 Protein Homology CDS 83221 83295 . + 0 ID=cds-WP_071841870.1;Parent=gene-VMS06_RS22855;Dbxref=GenBank:WP_071841870.1;Name=WP_071841870.1;gbkey=CDS;gene=yoaJ;inference=COORDINATES: protein motif:HMM:NF011343.0;locus_tag=VMS06_RS22855;product=protein YoaJ;protein_id=WP_071841870.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 83349 83597 . - . ID=gene-VMS06_RS04860;Name=VMS06_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04860 NZ_JAVXZI010000003.1 Protein Homology CDS 83349 83597 . - 0 ID=cds-WP_022647775.1;Parent=gene-VMS06_RS04860;Dbxref=GenBank:WP_022647775.1;Name=WP_022647775.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310531.1;locus_tag=VMS06_RS04860;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_022647775.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 83967 84059 . + . ID=gene-VMS06_RS04865;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=VMS06_RS04865 NZ_JAVXZI010000003.1 Protein Homology CDS 83967 84059 . + 0 ID=cds-WP_071524166.1;Parent=gene-VMS06_RS04865;Dbxref=GenBank:WP_071524166.1;Name=WP_071524166.1;gbkey=CDS;gene=yncL;inference=COORDINATES: protein motif:HMM:NF000537.0;locus_tag=VMS06_RS04865;product=stress response membrane protein YncL;protein_id=WP_071524166.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 84183 85682 . + . ID=gene-VMS06_RS04870;Name=VMS06_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04870 NZ_JAVXZI010000003.1 Protein Homology CDS 84183 85682 . + 0 ID=cds-WP_323630617.1;Parent=gene-VMS06_RS04870;Dbxref=GenBank:WP_323630617.1;Name=WP_323630617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809208.1;locus_tag=VMS06_RS04870;product=EAL domain-containing protein;protein_id=WP_323630617.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 85687 85932 . - . ID=gene-VMS06_RS04875;Name=VMS06_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04875 NZ_JAVXZI010000003.1 Protein Homology CDS 85687 85932 . - 0 ID=cds-WP_022647773.1;Parent=gene-VMS06_RS04875;Dbxref=GenBank:WP_022647773.1;Name=WP_022647773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415811.1;locus_tag=VMS06_RS04875;product=DUF2543 family protein;protein_id=WP_022647773.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq pseudogene 86009 86179 . - . ID=gene-VMS06_RS04880;Name=VMS06_RS04880;end_range=86179,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS04880;partial=true;pseudo=true NZ_JAVXZI010000003.1 Protein Homology CDS 86009 86179 . - 0 ID=cds-VMS06_RS04880;Parent=gene-VMS06_RS04880;Note=Converts isocitrate to alpha ketoglutarate%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=86179,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=VMS06_RS04880;partial=true;product=NADP-dependent isocitrate dehydrogenase;pseudo=true;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 86790 87554 . + . ID=gene-VMS06_RS04885;Name=VMS06_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04885 NZ_JAVXZI010000003.1 GeneMarkS-2+ CDS 86790 87554 . + 0 ID=cds-WP_129008668.1;Parent=gene-VMS06_RS04885;Dbxref=GenBank:WP_129008668.1;Name=WP_129008668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS04885;product=hypothetical protein;protein_id=WP_129008668.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq pseudogene 87663 87868 . - . ID=gene-VMS06_RS04890;Name=VMS06_RS04890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS04890;pseudo=true NZ_JAVXZI010000003.1 Protein Homology CDS 87663 87868 . - 0 ID=cds-VMS06_RS04890;Parent=gene-VMS06_RS04890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820503.1;locus_tag=VMS06_RS04890;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 88052 88195 . - . ID=gene-VMS06_RS04895;Name=VMS06_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04895 NZ_JAVXZI010000003.1 GeneMarkS-2+ CDS 88052 88195 . - 0 ID=cds-WP_163373914.1;Parent=gene-VMS06_RS04895;Dbxref=GenBank:WP_163373914.1;Name=WP_163373914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS04895;product=hypothetical protein;protein_id=WP_163373914.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 88295 88717 . - . ID=gene-VMS06_RS04900;Name=VMS06_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04900 NZ_JAVXZI010000003.1 Protein Homology CDS 88295 88717 . - 0 ID=cds-WP_129008666.1;Parent=gene-VMS06_RS04900;Dbxref=GenBank:WP_129008666.1;Name=WP_129008666.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007751543.1;locus_tag=VMS06_RS04900;product=tail fiber assembly protein;protein_id=WP_129008666.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 88719 91280 . - . ID=gene-VMS06_RS04905;Name=VMS06_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04905 NZ_JAVXZI010000003.1 Protein Homology CDS 88719 91280 . - 0 ID=cds-WP_241698183.1;Parent=gene-VMS06_RS04905;Dbxref=GenBank:WP_241698183.1;Name=WP_241698183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150405.1;locus_tag=VMS06_RS04905;product=phage tail-collar fiber domain-containing protein;protein_id=WP_241698183.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 91283 91834 . - . ID=gene-VMS06_RS04910;Name=VMS06_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04910 NZ_JAVXZI010000003.1 Protein Homology CDS 91283 91834 . - 0 ID=cds-WP_045345258.1;Parent=gene-VMS06_RS04910;Dbxref=GenBank:WP_045345258.1;Name=WP_045345258.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000130019.1;locus_tag=VMS06_RS04910;product=phage tail protein I;protein_id=WP_045345258.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 91827 92741 . - . ID=gene-VMS06_RS04915;Name=VMS06_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04915 NZ_JAVXZI010000003.1 Protein Homology CDS 91827 92741 . - 0 ID=cds-WP_129008664.1;Parent=gene-VMS06_RS04915;Dbxref=GenBank:WP_129008664.1;Name=WP_129008664.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004092415.1;locus_tag=VMS06_RS04915;product=baseplate assembly protein;protein_id=WP_129008664.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 92725 93078 . - . ID=gene-VMS06_RS04920;Name=VMS06_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04920 NZ_JAVXZI010000003.1 Protein Homology CDS 92725 93078 . - 0 ID=cds-WP_045325028.1;Parent=gene-VMS06_RS04920;Dbxref=GenBank:WP_045325028.1;Name=WP_045325028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001014690.1;locus_tag=VMS06_RS04920;product=GPW/gp25 family protein;protein_id=WP_045325028.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 93117 94235 . - . ID=gene-VMS06_RS04925;Name=VMS06_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04925 NZ_JAVXZI010000003.1 Protein Homology CDS 93117 94235 . - 0 ID=cds-WP_129008662.1;Parent=gene-VMS06_RS04925;Dbxref=GenBank:WP_129008662.1;Name=WP_129008662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150409.1;locus_tag=VMS06_RS04925;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_129008662.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 94238 94453 . - . ID=gene-VMS06_RS04930;Name=VMS06_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04930 NZ_JAVXZI010000003.1 Protein Homology CDS 94238 94453 . - 0 ID=cds-WP_045899456.1;Parent=gene-VMS06_RS04930;Dbxref=GenBank:WP_045899456.1;Name=WP_045899456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142386.1;locus_tag=VMS06_RS04930;product=tail protein X;protein_id=WP_045899456.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 94428 94889 . - . ID=gene-VMS06_RS04935;Name=VMS06_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04935 NZ_JAVXZI010000003.1 Protein Homology CDS 94428 94889 . - 0 ID=cds-WP_373690837.1;Parent=gene-VMS06_RS04935;Dbxref=GenBank:WP_373690837.1;Name=WP_373690837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004092419.1;locus_tag=VMS06_RS04935;product=phage tail protein;protein_id=WP_373690837.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 94895 96985 . - . ID=gene-VMS06_RS04940;Name=VMS06_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04940 NZ_JAVXZI010000003.1 Protein Homology CDS 94895 96985 . - 0 ID=cds-WP_323630618.1;Parent=gene-VMS06_RS04940;Dbxref=GenBank:WP_323630618.1;Name=WP_323630618.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150412.1;locus_tag=VMS06_RS04940;product=AAA family ATPase;protein_id=WP_323630618.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 97100 97387 . - . ID=gene-VMS06_RS04945;Name=VMS06_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04945 NZ_JAVXZI010000003.1 Protein Homology CDS 97100 97387 . - 0 ID=cds-WP_023299869.1;Parent=gene-VMS06_RS04945;Dbxref=GenBank:WP_023299869.1;Name=WP_023299869.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150413.1;locus_tag=VMS06_RS04945;product=phage tail assembly protein;protein_id=WP_023299869.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 97439 97945 . - . ID=gene-VMS06_RS04950;Name=VMS06_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04950 NZ_JAVXZI010000003.1 Protein Homology CDS 97439 97945 . - 0 ID=cds-WP_023299868.1;Parent=gene-VMS06_RS04950;Dbxref=GenBank:WP_023299868.1;Name=WP_023299868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280988.1;locus_tag=VMS06_RS04950;product=phage major tail tube protein;protein_id=WP_023299868.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 97942 99411 . - . ID=gene-VMS06_RS04955;Name=VMS06_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04955 NZ_JAVXZI010000003.1 Protein Homology CDS 97942 99411 . - 0 ID=cds-WP_129008660.1;Parent=gene-VMS06_RS04955;Dbxref=GenBank:WP_129008660.1;Name=WP_129008660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150415.1;locus_tag=VMS06_RS04955;product=phage tail sheath C-terminal domain-containing protein;protein_id=WP_129008660.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 99450 100073 . - . ID=gene-VMS06_RS04960;Name=VMS06_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04960 NZ_JAVXZI010000003.1 Protein Homology CDS 99450 100073 . - 0 ID=cds-WP_032619493.1;Parent=gene-VMS06_RS04960;Dbxref=GenBank:WP_032619493.1;Name=WP_032619493.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001006707.1;locus_tag=VMS06_RS04960;product=phage baseplate assembly protein V;protein_id=WP_032619493.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 100066 100620 . - . ID=gene-VMS06_RS04965;Name=VMS06_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04965 NZ_JAVXZI010000003.1 Protein Homology CDS 100066 100620 . - 0 ID=cds-WP_023303465.1;Parent=gene-VMS06_RS04965;Dbxref=GenBank:WP_023303465.1;Name=WP_023303465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150417.1;locus_tag=VMS06_RS04965;product=hypothetical protein;protein_id=WP_023303465.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 100629 101291 . - . ID=gene-VMS06_RS04970;Name=VMS06_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04970 NZ_JAVXZI010000003.1 Protein Homology CDS 100629 101291 . - 0 ID=cds-WP_129008658.1;Parent=gene-VMS06_RS04970;Dbxref=GenBank:WP_129008658.1;Name=WP_129008658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150418.1;locus_tag=VMS06_RS04970;product=hypothetical protein;protein_id=WP_129008658.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 101293 101649 . - . ID=gene-VMS06_RS04975;Name=VMS06_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04975 NZ_JAVXZI010000003.1 Protein Homology CDS 101293 101649 . - 0 ID=cds-WP_023303463.1;Parent=gene-VMS06_RS04975;Dbxref=GenBank:WP_023303463.1;Name=WP_023303463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150419.1;locus_tag=VMS06_RS04975;product=head-tail joining protein;protein_id=WP_023303463.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 101649 101984 . - . ID=gene-VMS06_RS04980;Name=VMS06_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04980 NZ_JAVXZI010000003.1 Protein Homology CDS 101649 101984 . - 0 ID=cds-WP_032658106.1;Parent=gene-VMS06_RS04980;Dbxref=GenBank:WP_032658106.1;Name=WP_032658106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016063056.1;locus_tag=VMS06_RS04980;product=DUF2190 family protein;protein_id=WP_032658106.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 102051 104171 . - . ID=gene-VMS06_RS04985;Name=VMS06_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04985 NZ_JAVXZI010000003.1 Protein Homology CDS 102051 104171 . - 0 ID=cds-WP_373690836.1;Parent=gene-VMS06_RS04985;Dbxref=GenBank:WP_373690836.1;Name=WP_373690836.1;Ontology_term=GO:0019082,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001585568.1;locus_tag=VMS06_RS04985;product=ClpP-like prohead protease/major capsid protein fusion protein;protein_id=WP_373690836.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 104119 105639 . - . ID=gene-VMS06_RS04990;Name=VMS06_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04990 NZ_JAVXZI010000003.1 Protein Homology CDS 104119 105639 . - 0 ID=cds-WP_045911475.1;Parent=gene-VMS06_RS04990;Dbxref=GenBank:WP_045911475.1;Name=WP_045911475.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000505369.1;locus_tag=VMS06_RS04990;product=phage portal protein;protein_id=WP_045911475.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 105648 105863 . - . ID=gene-VMS06_RS04995;Name=VMS06_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS04995 NZ_JAVXZI010000003.1 Protein Homology CDS 105648 105863 . - 0 ID=cds-WP_129008656.1;Parent=gene-VMS06_RS04995;Dbxref=GenBank:WP_129008656.1;Name=WP_129008656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001406236.1;locus_tag=VMS06_RS04995;product=hypothetical protein;protein_id=WP_129008656.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 105860 107980 . - . ID=gene-VMS06_RS05000;Name=VMS06_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05000 NZ_JAVXZI010000003.1 Protein Homology CDS 105860 107980 . - 0 ID=cds-WP_129008654.1;Parent=gene-VMS06_RS05000;Dbxref=GenBank:WP_129008654.1;Name=WP_129008654.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150424.1;locus_tag=VMS06_RS05000;product=phage terminase large subunit family protein;protein_id=WP_129008654.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 107984 108487 . - . ID=gene-VMS06_RS05005;Name=VMS06_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05005 NZ_JAVXZI010000003.1 Protein Homology CDS 107984 108487 . - 0 ID=cds-WP_129009012.1;Parent=gene-VMS06_RS05005;Dbxref=GenBank:WP_129009012.1;Name=WP_129009012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884621.1;locus_tag=VMS06_RS05005;product=DUF1441 family protein;protein_id=WP_129009012.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 109878 110108 . - . ID=gene-VMS06_RS05010;Name=VMS06_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05010 NZ_JAVXZI010000003.1 GeneMarkS-2+ CDS 109878 110108 . - 0 ID=cds-WP_023303456.1;Parent=gene-VMS06_RS05010;Dbxref=GenBank:WP_023303456.1;Name=WP_023303456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS05010;product=hypothetical protein;protein_id=WP_023303456.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 110323 110592 . - . ID=gene-VMS06_RS05015;Name=VMS06_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05015 NZ_JAVXZI010000003.1 Protein Homology CDS 110323 110592 . - 0 ID=cds-WP_129008652.1;Parent=gene-VMS06_RS05015;Dbxref=GenBank:WP_129008652.1;Name=WP_129008652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000505354.1;locus_tag=VMS06_RS05015;product=hypothetical protein;protein_id=WP_129008652.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 110600 111229 . - . ID=gene-VMS06_RS05020;Name=VMS06_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05020 NZ_JAVXZI010000003.1 Protein Homology CDS 110600 111229 . - 0 ID=cds-WP_048217864.1;Parent=gene-VMS06_RS05020;Dbxref=GenBank:WP_048217864.1;Name=WP_048217864.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016042195.1;locus_tag=VMS06_RS05020;product=glycoside hydrolase family 19 protein;protein_id=WP_048217864.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 111229 111510 . - . ID=gene-VMS06_RS05025;Name=VMS06_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05025 NZ_JAVXZI010000003.1 Protein Homology CDS 111229 111510 . - 0 ID=cds-WP_022651286.1;Parent=gene-VMS06_RS05025;Dbxref=GenBank:WP_022651286.1;Name=WP_022651286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000422366.1;locus_tag=VMS06_RS05025;product=phage holin family protein;protein_id=WP_022651286.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 111497 111883 . - . ID=gene-VMS06_RS05030;Name=VMS06_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05030 NZ_JAVXZI010000003.1 Protein Homology CDS 111497 111883 . - 0 ID=cds-WP_015570936.1;Parent=gene-VMS06_RS05030;Dbxref=GenBank:WP_015570936.1;Name=WP_015570936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811578.1;locus_tag=VMS06_RS05030;product=phage holin family protein;protein_id=WP_015570936.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 113001 113606 . - . ID=gene-VMS06_RS05040;Name=VMS06_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05040 NZ_JAVXZI010000003.1 Protein Homology CDS 113001 113606 . - 0 ID=cds-WP_148735426.1;Parent=gene-VMS06_RS05040;Dbxref=GenBank:WP_148735426.1;Name=WP_148735426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017639.1;locus_tag=VMS06_RS05040;product=hypothetical protein;protein_id=WP_148735426.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 113619 114638 . - . ID=gene-VMS06_RS05045;Name=VMS06_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05045 NZ_JAVXZI010000003.1 Protein Homology CDS 113619 114638 . - 0 ID=cds-WP_148735424.1;Parent=gene-VMS06_RS05045;Dbxref=GenBank:WP_148735424.1;Name=WP_148735424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020315049.1;locus_tag=VMS06_RS05045;product=DUF968 domain-containing protein;protein_id=WP_148735424.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 114646 114846 . - . ID=gene-VMS06_RS05050;Name=VMS06_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05050 NZ_JAVXZI010000003.1 Protein Homology CDS 114646 114846 . - 0 ID=cds-WP_044703828.1;Parent=gene-VMS06_RS05050;Dbxref=GenBank:WP_044703828.1;Name=WP_044703828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014716035.1;locus_tag=VMS06_RS05050;product=hypothetical protein;protein_id=WP_044703828.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 115102 115356 . - . ID=gene-VMS06_RS05055;Name=VMS06_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05055 NZ_JAVXZI010000003.1 Protein Homology CDS 115102 115356 . - 0 ID=cds-WP_032658080.1;Parent=gene-VMS06_RS05055;Dbxref=GenBank:WP_032658080.1;Name=WP_032658080.1;Ontology_term=GO:0030153,GO:0015643;gbkey=CDS;go_function=toxic substance binding|0015643||IEA;go_process=bacteriocin immunity|0030153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876984.1;locus_tag=VMS06_RS05055;product=colicin E3-like toxin immunity protein;protein_id=WP_032658080.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 115366 116943 . - . ID=gene-VMS06_RS05060;Name=VMS06_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05060 NZ_JAVXZI010000003.1 Protein Homology CDS 115366 116943 . - 0 ID=cds-WP_187418464.1;Parent=gene-VMS06_RS05060;Dbxref=GenBank:WP_187418464.1;Name=WP_187418464.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015479.7;locus_tag=VMS06_RS05060;product=colicin-like bacteriocin tRNase domain-containing protein;protein_id=WP_187418464.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 117227 117460 . - . ID=gene-VMS06_RS05065;Name=VMS06_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05065 NZ_JAVXZI010000003.1 Protein Homology CDS 117227 117460 . - 0 ID=cds-WP_080337586.1;Parent=gene-VMS06_RS05065;Dbxref=GenBank:WP_080337586.1;Name=WP_080337586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013365848.1;locus_tag=VMS06_RS05065;product=hypothetical protein;protein_id=WP_080337586.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 117499 117732 . - . ID=gene-VMS06_RS05070;Name=VMS06_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05070 NZ_JAVXZI010000003.1 Protein Homology CDS 117499 117732 . - 0 ID=cds-WP_032658078.1;Parent=gene-VMS06_RS05070;Dbxref=GenBank:WP_032658078.1;Name=WP_032658078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121036.1;locus_tag=VMS06_RS05070;product=DinI-like family protein;protein_id=WP_032658078.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 118081 118446 . - . ID=gene-VMS06_RS05080;Name=VMS06_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05080 NZ_JAVXZI010000003.1 Protein Homology CDS 118081 118446 . - 0 ID=cds-WP_148735425.1;Parent=gene-VMS06_RS05080;Dbxref=GenBank:WP_148735425.1;Name=WP_148735425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571545.1;locus_tag=VMS06_RS05080;product=hypothetical protein;protein_id=WP_148735425.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 118446 118778 . - . ID=gene-VMS06_RS05085;Name=VMS06_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05085 NZ_JAVXZI010000003.1 GeneMarkS-2+ CDS 118446 118778 . - 0 ID=cds-WP_148735422.1;Parent=gene-VMS06_RS05085;Dbxref=GenBank:WP_148735422.1;Name=WP_148735422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS05085;product=hypothetical protein;protein_id=WP_148735422.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 118775 119035 . - . ID=gene-VMS06_RS05090;Name=VMS06_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05090 NZ_JAVXZI010000003.1 Protein Homology CDS 118775 119035 . - 0 ID=cds-WP_032658072.1;Parent=gene-VMS06_RS05090;Dbxref=GenBank:WP_032658072.1;Name=WP_032658072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113629.1;locus_tag=VMS06_RS05090;product=DUF977 family protein;protein_id=WP_032658072.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 119039 119458 . - . ID=gene-VMS06_RS05095;Name=VMS06_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05095 NZ_JAVXZI010000003.1 Protein Homology CDS 119039 119458 . - 0 ID=cds-WP_023303444.1;Parent=gene-VMS06_RS05095;Dbxref=GenBank:WP_023303444.1;Name=WP_023303444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433066.1;locus_tag=VMS06_RS05095;product=PerC family transcriptional regulator;protein_id=WP_023303444.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 119473 120018 . - . ID=gene-VMS06_RS05100;Name=VMS06_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05100 NZ_JAVXZI010000003.1 Protein Homology CDS 119473 120018 . - 0 ID=cds-WP_258319984.1;Parent=gene-VMS06_RS05100;Dbxref=GenBank:WP_258319984.1;Name=WP_258319984.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001164686.1;locus_tag=VMS06_RS05100;product=replication protein P;protein_id=WP_258319984.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 119930 120988 . - . ID=gene-VMS06_RS05105;Name=VMS06_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05105 NZ_JAVXZI010000003.1 Protein Homology CDS 119930 120988 . - 0 ID=cds-WP_148735420.1;Parent=gene-VMS06_RS05105;Dbxref=GenBank:WP_148735420.1;Name=WP_148735420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001691506.1;locus_tag=VMS06_RS05105;product=DnaT-like ssDNA-binding domain-containing protein;protein_id=WP_148735420.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 121025 121579 . - . ID=gene-VMS06_RS05110;Name=VMS06_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05110 NZ_JAVXZI010000003.1 Protein Homology CDS 121025 121579 . - 0 ID=cds-WP_148735419.1;Parent=gene-VMS06_RS05110;Dbxref=GenBank:WP_148735419.1;Name=WP_148735419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014228885.1;locus_tag=VMS06_RS05110;product=toxin YdaT family protein;protein_id=WP_148735419.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 121583 121798 . - . ID=gene-VMS06_RS05115;Name=VMS06_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05115 NZ_JAVXZI010000003.1 Protein Homology CDS 121583 121798 . - 0 ID=cds-WP_148735418.1;Parent=gene-VMS06_RS05115;Dbxref=GenBank:WP_148735418.1;Name=WP_148735418.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.7;locus_tag=VMS06_RS05115;product=helix-turn-helix transcriptional regulator;protein_id=WP_148735418.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 121905 122285 . + . ID=gene-VMS06_RS05120;Name=VMS06_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05120 NZ_JAVXZI010000003.1 Protein Homology CDS 121905 122285 . + 0 ID=cds-WP_032658059.1;Parent=gene-VMS06_RS05120;Dbxref=GenBank:WP_032658059.1;Name=WP_032658059.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009113116.1;locus_tag=VMS06_RS05120;product=helix-turn-helix domain-containing protein;protein_id=WP_032658059.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 122560 122748 . + . ID=gene-VMS06_RS05125;Name=VMS06_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05125 NZ_JAVXZI010000003.1 GeneMarkS-2+ CDS 122560 122748 . + 0 ID=cds-WP_126514699.1;Parent=gene-VMS06_RS05125;Dbxref=GenBank:WP_126514699.1;Name=WP_126514699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS05125;product=hypothetical protein;protein_id=WP_126514699.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 123021 125504 . + . ID=gene-VMS06_RS05130;Name=VMS06_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05130 NZ_JAVXZI010000003.1 Protein Homology CDS 123021 125504 . + 0 ID=cds-WP_074385166.1;Parent=gene-VMS06_RS05130;Dbxref=GenBank:WP_074385166.1;Name=WP_074385166.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882487.1;locus_tag=VMS06_RS05130;product=3'-5' exonuclease;protein_id=WP_074385166.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 125557 125802 . + . ID=gene-VMS06_RS05140;Name=VMS06_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05140 NZ_JAVXZI010000003.1 Protein Homology CDS 125557 125802 . + 0 ID=cds-WP_071785721.1;Parent=gene-VMS06_RS05140;Dbxref=GenBank:WP_071785721.1;Name=WP_071785721.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542206.1;locus_tag=VMS06_RS05140;product=excisionase;protein_id=WP_071785721.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 125783 126913 . + . ID=gene-VMS06_RS05145;Name=VMS06_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05145 NZ_JAVXZI010000003.1 Protein Homology CDS 125783 126913 . + 0 ID=cds-WP_148735417.1;Parent=gene-VMS06_RS05145;Dbxref=GenBank:WP_148735417.1;Name=WP_148735417.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236624.1;locus_tag=VMS06_RS05145;product=site-specific integrase;protein_id=WP_148735417.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 126906 127763 . - . ID=gene-VMS06_RS05150;Name=VMS06_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05150 NZ_JAVXZI010000003.1 Protein Homology CDS 126906 127763 . - 0 ID=cds-WP_148735416.1;Parent=gene-VMS06_RS05150;Dbxref=GenBank:WP_148735416.1;Name=WP_148735416.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212083.1;locus_tag=VMS06_RS05150;product=DNA adenine methylase;protein_id=WP_148735416.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 127841 129547 . - . ID=gene-VMS06_RS05155;Name=VMS06_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05155 NZ_JAVXZI010000003.1 Protein Homology CDS 127841 129547 . - 0 ID=cds-WP_148735415.1;Parent=gene-VMS06_RS05155;Dbxref=GenBank:WP_148735415.1;Name=WP_148735415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827287.1;locus_tag=VMS06_RS05155;product=AAA family ATPase;protein_id=WP_148735415.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 129712 130962 . - . ID=gene-VMS06_RS05160;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=VMS06_RS05160 NZ_JAVXZI010000003.1 Protein Homology CDS 129712 130962 . - 0 ID=cds-WP_003857898.1;Parent=gene-VMS06_RS05160;Dbxref=GenBank:WP_003857898.1;Name=WP_003857898.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=VMS06_RS05160;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_003857898.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 131080 131742 . + . ID=gene-VMS06_RS05165;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=VMS06_RS05165 NZ_JAVXZI010000003.1 Protein Homology CDS 131080 131742 . + 0 ID=cds-WP_022650805.1;Parent=gene-VMS06_RS05165;Dbxref=GenBank:WP_022650805.1;Name=WP_022650805.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809210.1;locus_tag=VMS06_RS05165;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_022650805.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 131742 132215 . + . ID=gene-VMS06_RS05170;Name=VMS06_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05170 NZ_JAVXZI010000003.1 Protein Homology CDS 131742 132215 . + 0 ID=cds-WP_063147582.1;Parent=gene-VMS06_RS05170;Dbxref=GenBank:WP_063147582.1;Name=WP_063147582.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831477.1;locus_tag=VMS06_RS05170;product=NUDIX hydrolase;protein_id=WP_063147582.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 132256 133368 . + . ID=gene-VMS06_RS05175;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=VMS06_RS05175 NZ_JAVXZI010000003.1 Protein Homology CDS 132256 133368 . + 0 ID=cds-WP_032103856.1;Parent=gene-VMS06_RS05175;Dbxref=GenBank:WP_032103856.1;Name=WP_032103856.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006174754.1;locus_tag=VMS06_RS05175;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_032103856.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 133396 134025 . + . ID=gene-VMS06_RS05180;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=VMS06_RS05180 NZ_JAVXZI010000003.1 Protein Homology CDS 133396 134025 . + 0 ID=cds-WP_006809213.1;Parent=gene-VMS06_RS05180;Dbxref=GenBank:WP_006809213.1;Name=WP_006809213.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010430005.1;locus_tag=VMS06_RS05180;product=high frequency lysogenization protein HflD;protein_id=WP_006809213.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 134045 135415 . + . ID=gene-VMS06_RS05185;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=VMS06_RS05185 NZ_JAVXZI010000003.1 Protein Homology CDS 134045 135415 . + 0 ID=cds-WP_063147583.1;Parent=gene-VMS06_RS05185;Dbxref=GenBank:WP_063147583.1;Name=WP_063147583.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=VMS06_RS05185;product=adenylosuccinate lyase;protein_id=WP_063147583.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 135500 135892 . - . ID=gene-VMS06_RS05190;Name=VMS06_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05190 NZ_JAVXZI010000003.1 Protein Homology CDS 135500 135892 . - 0 ID=cds-WP_022647769.1;Parent=gene-VMS06_RS05190;Dbxref=GenBank:WP_022647769.1;Name=WP_022647769.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022631.7;locus_tag=VMS06_RS05190;product=hypothetical protein;protein_id=WP_022647769.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 136368 137039 . + . ID=gene-VMS06_RS05195;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=VMS06_RS05195 NZ_JAVXZI010000003.1 Protein Homology CDS 136368 137039 . + 0 ID=cds-WP_026094318.1;Parent=gene-VMS06_RS05195;Dbxref=GenBank:WP_026094318.1;Name=WP_026094318.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707059.1;locus_tag=VMS06_RS05195;product=two-component system response regulator PhoP;protein_id=WP_026094318.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 137040 138503 . + . ID=gene-VMS06_RS05200;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=VMS06_RS05200 NZ_JAVXZI010000003.1 Protein Homology CDS 137040 138503 . + 0 ID=cds-WP_022647768.1;Parent=gene-VMS06_RS05200;Dbxref=GenBank:WP_022647768.1;Name=WP_022647768.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809217.1;locus_tag=VMS06_RS05200;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_022647768.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 138595 139716 . + . ID=gene-VMS06_RS05205;Name=VMS06_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05205 NZ_JAVXZI010000003.1 Protein Homology CDS 138595 139716 . + 0 ID=cds-WP_022647767.1;Parent=gene-VMS06_RS05205;Dbxref=GenBank:WP_022647767.1;Name=WP_022647767.1;Ontology_term=GO:0043687,GO:0008198,GO:0016706;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226311.1;locus_tag=VMS06_RS05205;product=ribosomal protein uL16 3-hydroxylase;protein_id=WP_022647767.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 139809 140300 . - . ID=gene-VMS06_RS05210;Name=VMS06_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05210 NZ_JAVXZI010000003.1 Protein Homology CDS 139809 140300 . - 0 ID=cds-WP_022647766.1;Parent=gene-VMS06_RS05210;Dbxref=GenBank:WP_022647766.1;Name=WP_022647766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693623.1;locus_tag=VMS06_RS05210;product=REP-associated tyrosine transposase;protein_id=WP_022647766.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 140401 141624 . - . ID=gene-VMS06_RS05215;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=VMS06_RS05215 NZ_JAVXZI010000003.1 Protein Homology CDS 140401 141624 . - 0 ID=cds-WP_032624465.1;Parent=gene-VMS06_RS05215;Dbxref=GenBank:WP_032624465.1;Name=WP_032624465.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809220.1;locus_tag=VMS06_RS05215;product=peptidase T;protein_id=WP_032624465.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 141862 143010 . + . ID=gene-VMS06_RS05220;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=VMS06_RS05220 NZ_JAVXZI010000003.1 Protein Homology CDS 141862 143010 . + 0 ID=cds-WP_163385517.1;Parent=gene-VMS06_RS05220;Dbxref=GenBank:WP_163385517.1;Name=WP_163385517.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226309.1;locus_tag=VMS06_RS05220;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_163385517.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 142994 143851 . + . ID=gene-VMS06_RS05225;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=VMS06_RS05225 NZ_JAVXZI010000003.1 Protein Homology CDS 142994 143851 . + 0 ID=cds-WP_022647763.1;Parent=gene-VMS06_RS05225;Dbxref=GenBank:WP_022647763.1;Name=WP_022647763.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226308.1;locus_tag=VMS06_RS05225;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_022647763.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 143848 144639 . + . ID=gene-VMS06_RS05230;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=VMS06_RS05230 NZ_JAVXZI010000003.1 Protein Homology CDS 143848 144639 . + 0 ID=cds-WP_063147621.1;Parent=gene-VMS06_RS05230;Dbxref=GenBank:WP_063147621.1;Name=WP_063147621.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006174735.1;locus_tag=VMS06_RS05230;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_063147621.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 144636 145670 . + . ID=gene-VMS06_RS05235;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=VMS06_RS05235 NZ_JAVXZI010000003.1 Protein Homology CDS 144636 145670 . + 0 ID=cds-WP_063147622.1;Parent=gene-VMS06_RS05235;Dbxref=GenBank:WP_063147622.1;Name=WP_063147622.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=VMS06_RS05235;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_063147622.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 145705 146526 . - . ID=gene-VMS06_RS05240;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=VMS06_RS05240 NZ_JAVXZI010000003.1 Protein Homology CDS 145705 146526 . - 0 ID=cds-WP_022647760.1;Parent=gene-VMS06_RS05240;Dbxref=GenBank:WP_022647760.1;Name=WP_022647760.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460191.1;locus_tag=VMS06_RS05240;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_022647760.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 146541 147452 . - . ID=gene-VMS06_RS05245;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=VMS06_RS05245 NZ_JAVXZI010000003.1 Protein Homology CDS 146541 147452 . - 0 ID=cds-WP_063147623.1;Parent=gene-VMS06_RS05245;Dbxref=GenBank:WP_063147623.1;Name=WP_063147623.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309524.1;locus_tag=VMS06_RS05245;product=N-acetylglucosamine kinase;protein_id=WP_063147623.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 147507 148751 . - . ID=gene-VMS06_RS05250;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=VMS06_RS05250 NZ_JAVXZI010000003.1 Protein Homology CDS 147507 148751 . - 0 ID=cds-WP_063841151.1;Parent=gene-VMS06_RS05250;Dbxref=GenBank:WP_063841151.1;Name=WP_063841151.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=VMS06_RS05250;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_063841151.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 148751 149452 . - . ID=gene-VMS06_RS05255;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=VMS06_RS05255 NZ_JAVXZI010000003.1 Protein Homology CDS 148751 149452 . - 0 ID=cds-WP_022647757.1;Parent=gene-VMS06_RS05255;Dbxref=GenBank:WP_022647757.1;Name=WP_022647757.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415635.4;locus_tag=VMS06_RS05255;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_022647757.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 149445 150644 . - . ID=gene-VMS06_RS05260;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=VMS06_RS05260 NZ_JAVXZI010000003.1 Protein Homology CDS 149445 150644 . - 0 ID=cds-WP_323630619.1;Parent=gene-VMS06_RS05260;Dbxref=GenBank:WP_323630619.1;Name=WP_323630619.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=VMS06_RS05260;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_323630619.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 150901 151974 . + . ID=gene-VMS06_RS05265;Name=VMS06_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05265 NZ_JAVXZI010000003.1 Protein Homology CDS 150901 151974 . + 0 ID=cds-WP_063147625.1;Parent=gene-VMS06_RS05265;Dbxref=GenBank:WP_063147625.1;Name=WP_063147625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097099.1;locus_tag=VMS06_RS05265;product=acyltransferase family protein;protein_id=WP_063147625.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 152120 155566 . + . ID=gene-VMS06_RS05270;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=VMS06_RS05270 NZ_JAVXZI010000003.1 Protein Homology CDS 152120 155566 . + 0 ID=cds-WP_032624473.1;Parent=gene-VMS06_RS05270;Dbxref=GenBank:WP_032624473.1;Name=WP_032624473.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460186.1;locus_tag=VMS06_RS05270;product=transcription-repair coupling factor;protein_id=WP_032624473.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 155711 156676 . + . ID=gene-VMS06_RS05275;Name=ldtC;gbkey=Gene;gene=ldtC;gene_biotype=protein_coding;locus_tag=VMS06_RS05275 NZ_JAVXZI010000003.1 Protein Homology CDS 155711 156676 . + 0 ID=cds-WP_023299804.1;Parent=gene-VMS06_RS05275;Dbxref=GenBank:WP_023299804.1;Name=WP_023299804.1;gbkey=CDS;gene=ldtC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884659.1;locus_tag=VMS06_RS05275;product=L%2CD-transpeptidase LdtC;protein_id=WP_023299804.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 156753 157010 . - . ID=gene-VMS06_RS05280;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;locus_tag=VMS06_RS05280 NZ_JAVXZI010000003.1 Protein Homology CDS 156753 157010 . - 0 ID=cds-WP_006809234.1;Parent=gene-VMS06_RS05280;Dbxref=GenBank:WP_006809234.1;Name=WP_006809234.1;Ontology_term=GO:0006950,GO:0046688;gbkey=CDS;gene=bhsA;go_process=response to stress|0006950||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309517.1;locus_tag=VMS06_RS05280;product=multiple stress resistance protein BhsA;protein_id=WP_006809234.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 157256 157891 . + . ID=gene-VMS06_RS05285;Name=comR;gbkey=Gene;gene=comR;gene_biotype=protein_coding;locus_tag=VMS06_RS05285 NZ_JAVXZI010000003.1 Protein Homology CDS 157256 157891 . + 0 ID=cds-WP_022647753.1;Parent=gene-VMS06_RS05285;Dbxref=GenBank:WP_022647753.1;Name=WP_022647753.1;gbkey=CDS;gene=comR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010429744.1;locus_tag=VMS06_RS05285;product=TetR family copper-responsive transcriptional repressor ComR;protein_id=WP_022647753.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 157951 158490 . - . ID=gene-VMS06_RS05290;Name=VMS06_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05290 NZ_JAVXZI010000003.1 Protein Homology CDS 157951 158490 . - 0 ID=cds-WP_017384715.1;Parent=gene-VMS06_RS05290;Dbxref=GenBank:WP_017384715.1;Name=WP_017384715.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415628.1;locus_tag=VMS06_RS05290;product=glycine zipper 2TM domain-containing protein;protein_id=WP_017384715.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 158686 159990 . - . ID=gene-VMS06_RS05295;Name=VMS06_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05295 NZ_JAVXZI010000003.1 Protein Homology CDS 158686 159990 . - 0 ID=cds-WP_017693633.1;Parent=gene-VMS06_RS05295;Dbxref=GenBank:WP_017693633.1;Name=WP_017693633.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=VMS06_RS05295;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_017693633.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 160227 160769 . - . ID=gene-VMS06_RS05300;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=VMS06_RS05300 NZ_JAVXZI010000003.1 Protein Homology CDS 160227 160769 . - 0 ID=cds-WP_022647750.1;Parent=gene-VMS06_RS05300;Dbxref=GenBank:WP_022647750.1;Name=WP_022647750.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=VMS06_RS05300;product=alpha/beta hydrolase YcfP;protein_id=WP_022647750.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 160801 161826 . - . ID=gene-VMS06_RS05305;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=VMS06_RS05305 NZ_JAVXZI010000003.1 Protein Homology CDS 160801 161826 . - 0 ID=cds-WP_046618348.1;Parent=gene-VMS06_RS05305;Dbxref=GenBank:WP_046618348.1;Name=WP_046618348.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884661.1;locus_tag=VMS06_RS05305;product=beta-N-acetylhexosaminidase;protein_id=WP_046618348.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 161838 162662 . - . ID=gene-VMS06_RS05310;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=VMS06_RS05310 NZ_JAVXZI010000003.1 Protein Homology CDS 161838 162662 . - 0 ID=cds-WP_063147626.1;Parent=gene-VMS06_RS05310;Dbxref=GenBank:WP_063147626.1;Name=WP_063147626.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384718.1;locus_tag=VMS06_RS05310;product=thiamine kinase;protein_id=WP_063147626.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 162643 163287 . - . ID=gene-VMS06_RS05315;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=VMS06_RS05315 NZ_JAVXZI010000003.1 Protein Homology CDS 162643 163287 . - 0 ID=cds-WP_202075889.1;Parent=gene-VMS06_RS05315;Dbxref=GenBank:WP_202075889.1;Name=WP_202075889.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309510.1;locus_tag=VMS06_RS05315;product=penicillin-binding protein activator LpoB;protein_id=WP_202075889.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 163301 163675 . - . ID=gene-VMS06_RS05320;Name=VMS06_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05320 NZ_JAVXZI010000003.1 Protein Homology CDS 163301 163675 . - 0 ID=cds-WP_022647747.1;Parent=gene-VMS06_RS05320;Dbxref=GenBank:WP_022647747.1;Name=WP_022647747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784425.1;locus_tag=VMS06_RS05320;product=YcfL family putative periplasmic lipoprotein;protein_id=WP_022647747.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 163677 164036 . - . ID=gene-VMS06_RS05325;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=VMS06_RS05325 NZ_JAVXZI010000003.1 Protein Homology CDS 163677 164036 . - 0 ID=cds-WP_006809243.1;Parent=gene-VMS06_RS05325;Dbxref=GenBank:WP_006809243.1;Name=WP_006809243.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460175.1;locus_tag=VMS06_RS05325;product=purine nucleoside phosphoramidase;protein_id=WP_006809243.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 164390 166579 . + . ID=gene-VMS06_RS05330;Name=fhuE;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=VMS06_RS05330 NZ_JAVXZI010000003.1 Protein Homology CDS 164390 166579 . + 0 ID=cds-WP_323630622.1;Parent=gene-VMS06_RS05330;Dbxref=GenBank:WP_323630622.1;Name=WP_323630622.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuE;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384719.1;locus_tag=VMS06_RS05330;product=ferric-rhodotorulic acid/ferric-coprogen receptor FhuE;protein_id=WP_323630622.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 166719 168152 . - . ID=gene-VMS06_RS05335;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=VMS06_RS05335 NZ_JAVXZI010000003.1 Protein Homology CDS 166719 168152 . - 0 ID=cds-WP_006809245.1;Parent=gene-VMS06_RS05335;Dbxref=GenBank:WP_006809245.1;Name=WP_006809245.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1;locus_tag=VMS06_RS05335;product=PTS glucose transporter subunit IIBC;protein_id=WP_006809245.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 168451 169245 . - . ID=gene-VMS06_RS05340;Name=VMS06_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05340 NZ_JAVXZI010000003.1 Protein Homology CDS 168451 169245 . - 0 ID=cds-WP_023299800.1;Parent=gene-VMS06_RS05340;Dbxref=GenBank:WP_023299800.1;Name=WP_023299800.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169581.1;locus_tag=VMS06_RS05340;product=metal-dependent hydrolase;protein_id=WP_023299800.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 169256 170260 . - . ID=gene-VMS06_RS05345;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=VMS06_RS05345 NZ_JAVXZI010000003.1 Protein Homology CDS 169256 170260 . - 0 ID=cds-WP_022647744.1;Parent=gene-VMS06_RS05345;Dbxref=GenBank:WP_022647744.1;Name=WP_022647744.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244520.1;locus_tag=VMS06_RS05345;product=DNA polymerase III subunit delta';protein_id=WP_022647744.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 170257 170898 . - . ID=gene-VMS06_RS05350;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=VMS06_RS05350 NZ_JAVXZI010000003.1 Protein Homology CDS 170257 170898 . - 0 ID=cds-WP_022647743.1;Parent=gene-VMS06_RS05350;Dbxref=GenBank:WP_022647743.1;Name=WP_022647743.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415616.1;locus_tag=VMS06_RS05350;product=dTMP kinase;protein_id=WP_022647743.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 170888 171910 . - . ID=gene-VMS06_RS05355;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=VMS06_RS05355 NZ_JAVXZI010000003.1 Protein Homology CDS 170888 171910 . - 0 ID=cds-WP_063147629.1;Parent=gene-VMS06_RS05355;Dbxref=GenBank:WP_063147629.1;Name=WP_063147629.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309502.1;locus_tag=VMS06_RS05355;product=cell division protein YceG;protein_id=WP_063147629.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 171913 172722 . - . ID=gene-VMS06_RS05360;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=VMS06_RS05360 NZ_JAVXZI010000003.1 Protein Homology CDS 171913 172722 . - 0 ID=cds-WP_023305869.1;Parent=gene-VMS06_RS05360;Dbxref=GenBank:WP_023305869.1;Name=WP_023305869.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384723.1;locus_tag=VMS06_RS05360;product=aminodeoxychorismate lyase;protein_id=WP_023305869.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 172843 174084 . - . ID=gene-VMS06_RS05365;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=VMS06_RS05365 NZ_JAVXZI010000003.1 Protein Homology CDS 172843 174084 . - 0 ID=cds-WP_022647740.1;Parent=gene-VMS06_RS05365;Dbxref=GenBank:WP_022647740.1;Name=WP_022647740.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=VMS06_RS05365;product=beta-ketoacyl-ACP synthase II;protein_id=WP_022647740.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 174176 174412 . - . ID=gene-VMS06_RS05370;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=VMS06_RS05370 NZ_JAVXZI010000003.1 Protein Homology CDS 174176 174412 . - 0 ID=cds-WP_003857954.1;Parent=gene-VMS06_RS05370;Dbxref=GenBank:WP_003857954.1;Name=WP_003857954.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=VMS06_RS05370;product=acyl carrier protein;protein_id=WP_003857954.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 174567 175301 . - . ID=gene-VMS06_RS05375;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=VMS06_RS05375 NZ_JAVXZI010000003.1 Protein Homology CDS 174567 175301 . - 0 ID=cds-WP_022647739.1;Parent=gene-VMS06_RS05375;Dbxref=GenBank:WP_022647739.1;Name=WP_022647739.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=VMS06_RS05375;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_022647739.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 175314 176243 . - . ID=gene-VMS06_RS05380;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=VMS06_RS05380 NZ_JAVXZI010000003.1 Protein Homology CDS 175314 176243 . - 0 ID=cds-WP_022647738.1;Parent=gene-VMS06_RS05380;Dbxref=GenBank:WP_022647738.1;Name=WP_022647738.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226269.1;locus_tag=VMS06_RS05380;product=ACP S-malonyltransferase;protein_id=WP_022647738.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 176259 177212 . - . ID=gene-VMS06_RS05385;Name=VMS06_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05385 NZ_JAVXZI010000003.1 Protein Homology CDS 176259 177212 . - 0 ID=cds-WP_032624477.1;Parent=gene-VMS06_RS05385;Dbxref=GenBank:WP_032624477.1;Name=WP_032624477.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=VMS06_RS05385;product=beta-ketoacyl-ACP synthase III;protein_id=WP_032624477.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 177219 178253 . - . ID=gene-VMS06_RS05390;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=VMS06_RS05390 NZ_JAVXZI010000003.1 Protein Homology CDS 177219 178253 . - 0 ID=cds-WP_198921375.1;Parent=gene-VMS06_RS05390;Dbxref=GenBank:WP_198921375.1;Name=WP_198921375.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693638.1;locus_tag=VMS06_RS05390;product=phosphate acyltransferase PlsX;protein_id=WP_198921375.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 178335 178508 . - . ID=gene-VMS06_RS05395;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=VMS06_RS05395 NZ_JAVXZI010000003.1 Protein Homology CDS 178335 178508 . - 0 ID=cds-WP_003857964.1;Parent=gene-VMS06_RS05395;Dbxref=GenBank:WP_003857964.1;Name=WP_003857964.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=VMS06_RS05395;product=50S ribosomal protein L32;protein_id=WP_003857964.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 178525 179046 . - . ID=gene-VMS06_RS05400;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=VMS06_RS05400 NZ_JAVXZI010000003.1 Protein Homology CDS 178525 179046 . - 0 ID=cds-WP_003857966.1;Parent=gene-VMS06_RS05400;Dbxref=GenBank:WP_003857966.1;Name=WP_003857966.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=VMS06_RS05400;product=23S rRNA accumulation protein YceD;protein_id=WP_003857966.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 179187 179771 . + . ID=gene-VMS06_RS05405;Name=VMS06_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05405 NZ_JAVXZI010000003.1 Protein Homology CDS 179187 179771 . + 0 ID=cds-WP_032622147.1;Parent=gene-VMS06_RS05405;Dbxref=GenBank:WP_032622147.1;Name=WP_032622147.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693639.1;locus_tag=VMS06_RS05405;product=Maf family protein;protein_id=WP_032622147.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 179851 180798 . - . ID=gene-VMS06_RS05410;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=VMS06_RS05410 NZ_JAVXZI010000003.1 Protein Homology CDS 179851 180798 . - 0 ID=cds-WP_003857970.1;Parent=gene-VMS06_RS05410;Dbxref=GenBank:WP_003857970.1;Name=WP_003857970.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831443.1;locus_tag=VMS06_RS05410;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_003857970.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 181369 184476 . + . ID=gene-VMS06_RS05415;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=VMS06_RS05415 NZ_JAVXZI010000003.1 Protein Homology CDS 181369 184476 . + 0 ID=cds-WP_063147630.1;Parent=gene-VMS06_RS05415;Dbxref=GenBank:WP_063147630.1;Name=WP_063147630.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849889.1;locus_tag=VMS06_RS05415;product=ribonuclease E;protein_id=WP_063147630.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 184517 185455 . - . ID=gene-VMS06_RS05420;Name=VMS06_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05420 NZ_JAVXZI010000003.1 Protein Homology CDS 184517 185455 . - 0 ID=cds-WP_022647733.1;Parent=gene-VMS06_RS05420;Dbxref=GenBank:WP_022647733.1;Name=WP_022647733.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857974.1;locus_tag=VMS06_RS05420;product=LysR family transcriptional regulator;protein_id=WP_022647733.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 185565 186776 . + . ID=gene-VMS06_RS05425;Name=VMS06_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05425 NZ_JAVXZI010000003.1 Protein Homology CDS 185565 186776 . + 0 ID=cds-WP_022647732.1;Parent=gene-VMS06_RS05425;Dbxref=GenBank:WP_022647732.1;Name=WP_022647732.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857976.1;locus_tag=VMS06_RS05425;product=MFS transporter;protein_id=WP_022647732.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 186852 187805 . - . ID=gene-VMS06_RS05430;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=VMS06_RS05430 NZ_JAVXZI010000003.1 Protein Homology CDS 186852 187805 . - 0 ID=cds-WP_022647731.1;Parent=gene-VMS06_RS05430;Dbxref=GenBank:WP_022647731.1;Name=WP_022647731.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460155.1;locus_tag=VMS06_RS05430;product=flagellar hook-associated protein FlgL;protein_id=WP_022647731.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 187822 189462 . - . ID=gene-VMS06_RS05435;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=VMS06_RS05435 NZ_JAVXZI010000003.1 Protein Homology CDS 187822 189462 . - 0 ID=cds-WP_038415826.1;Parent=gene-VMS06_RS05435;Dbxref=GenBank:WP_038415826.1;Name=WP_038415826.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883368.1;locus_tag=VMS06_RS05435;product=flagellar hook-associated protein FlgK;protein_id=WP_038415826.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 189538 190491 . - . ID=gene-VMS06_RS05440;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=VMS06_RS05440 NZ_JAVXZI010000003.1 Protein Homology CDS 189538 190491 . - 0 ID=cds-WP_063147631.1;Parent=gene-VMS06_RS05440;Dbxref=GenBank:WP_063147631.1;Name=WP_063147631.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460153.1;locus_tag=VMS06_RS05440;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_063147631.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 190492 191589 . - . ID=gene-VMS06_RS05445;Name=VMS06_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05445 NZ_JAVXZI010000003.1 Protein Homology CDS 190492 191589 . - 0 ID=cds-WP_022647728.1;Parent=gene-VMS06_RS05445;Dbxref=GenBank:WP_022647728.1;Name=WP_022647728.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415598.3;locus_tag=VMS06_RS05445;product=flagellar basal body P-ring protein FlgI;protein_id=WP_022647728.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 191602 192300 . - . ID=gene-VMS06_RS05450;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=VMS06_RS05450 NZ_JAVXZI010000003.1 Protein Homology CDS 191602 192300 . - 0 ID=cds-WP_003857987.1;Parent=gene-VMS06_RS05450;Dbxref=GenBank:WP_003857987.1;Name=WP_003857987.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309484.1;locus_tag=VMS06_RS05450;product=flagellar basal body L-ring protein FlgH;protein_id=WP_003857987.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 192358 193140 . - . ID=gene-VMS06_RS05455;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=VMS06_RS05455 NZ_JAVXZI010000003.1 Protein Homology CDS 192358 193140 . - 0 ID=cds-WP_000625853.1;Parent=gene-VMS06_RS05455;Dbxref=GenBank:WP_000625853.1;Name=WP_000625853.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006819466.1;locus_tag=VMS06_RS05455;product=flagellar basal-body rod protein FlgG;protein_id=WP_000625853.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 193152 193907 . - . ID=gene-VMS06_RS05460;Name=VMS06_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05460 NZ_JAVXZI010000003.1 Protein Homology CDS 193152 193907 . - 0 ID=cds-WP_022647727.1;Parent=gene-VMS06_RS05460;Dbxref=GenBank:WP_022647727.1;Name=WP_022647727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460149.1;locus_tag=VMS06_RS05460;product=flagellar basal body rod protein FlgF;protein_id=WP_022647727.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 193928 195136 . - . ID=gene-VMS06_RS05465;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=VMS06_RS05465 NZ_JAVXZI010000003.1 Protein Homology CDS 193928 195136 . - 0 ID=cds-WP_045622627.1;Parent=gene-VMS06_RS05465;Dbxref=GenBank:WP_045622627.1;Name=WP_045622627.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309481.1;locus_tag=VMS06_RS05465;product=flagellar hook protein FlgE;protein_id=WP_045622627.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 195163 195873 . - . ID=gene-VMS06_RS05470;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=VMS06_RS05470 NZ_JAVXZI010000003.1 Protein Homology CDS 195163 195873 . - 0 ID=cds-WP_003857994.1;Parent=gene-VMS06_RS05470;Dbxref=GenBank:WP_003857994.1;Name=WP_003857994.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309480.1;locus_tag=VMS06_RS05470;product=flagellar hook assembly protein FlgD;protein_id=WP_003857994.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 195885 196289 . - . ID=gene-VMS06_RS05475;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=VMS06_RS05475 NZ_JAVXZI010000003.1 Protein Homology CDS 195885 196289 . - 0 ID=cds-WP_063147632.1;Parent=gene-VMS06_RS05475;Dbxref=GenBank:WP_063147632.1;Name=WP_063147632.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740734.1;locus_tag=VMS06_RS05475;product=flagellar basal body rod protein FlgC;protein_id=WP_063147632.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 196293 196709 . - . ID=gene-VMS06_RS05480;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=VMS06_RS05480 NZ_JAVXZI010000003.1 Protein Homology CDS 196293 196709 . - 0 ID=cds-WP_045622629.1;Parent=gene-VMS06_RS05480;Dbxref=GenBank:WP_045622629.1;Name=WP_045622629.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883362.1;locus_tag=VMS06_RS05480;product=flagellar basal body rod protein FlgB;protein_id=WP_045622629.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 196867 197526 . + . ID=gene-VMS06_RS05485;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=VMS06_RS05485 NZ_JAVXZI010000003.1 Protein Homology CDS 196867 197526 . + 0 ID=cds-WP_022647723.1;Parent=gene-VMS06_RS05485;Dbxref=GenBank:WP_022647723.1;Name=WP_022647723.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194073.1;locus_tag=VMS06_RS05485;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_022647723.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 197620 197913 . + . ID=gene-VMS06_RS05490;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=VMS06_RS05490 NZ_JAVXZI010000003.1 Protein Homology CDS 197620 197913 . + 0 ID=cds-WP_003858002.1;Parent=gene-VMS06_RS05490;Dbxref=GenBank:WP_003858002.1;Name=WP_003858002.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309476.1;locus_tag=VMS06_RS05490;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_003858002.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 197918 198343 . + . ID=gene-VMS06_RS05495;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=VMS06_RS05495 NZ_JAVXZI010000003.1 Protein Homology CDS 197918 198343 . + 0 ID=cds-WP_022647721.1;Parent=gene-VMS06_RS05495;Dbxref=GenBank:WP_022647721.1;Name=WP_022647721.1;gbkey=CDS;gene=flgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460142.1;locus_tag=VMS06_RS05495;product=flagella biosynthesis chaperone FlgN;protein_id=WP_022647721.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 198402 199937 . - . ID=gene-VMS06_RS05500;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=VMS06_RS05500 NZ_JAVXZI010000003.1 Protein Homology CDS 198402 199937 . - 0 ID=cds-WP_063147633.1;Parent=gene-VMS06_RS05500;Dbxref=GenBank:WP_063147633.1;Name=WP_063147633.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309474.1;locus_tag=VMS06_RS05500;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_063147633.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 200067 200990 . - . ID=gene-VMS06_RS05505;Name=VMS06_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05505 NZ_JAVXZI010000003.1 Protein Homology CDS 200067 200990 . - 0 ID=cds-WP_023305857.1;Parent=gene-VMS06_RS05505;Dbxref=GenBank:WP_023305857.1;Name=WP_023305857.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884683.1;locus_tag=VMS06_RS05505;product=Gfo/Idh/MocA family protein;protein_id=WP_023305857.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 200993 201643 . - . ID=gene-VMS06_RS05510;Name=VMS06_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05510 NZ_JAVXZI010000003.1 Protein Homology CDS 200993 201643 . - 0 ID=cds-WP_045307934.1;Parent=gene-VMS06_RS05510;Dbxref=GenBank:WP_045307934.1;Name=WP_045307934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309472.1;locus_tag=VMS06_RS05510;product=YceH family protein;protein_id=WP_045307934.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 201653 202237 . - . ID=gene-VMS06_RS05515;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=VMS06_RS05515 NZ_JAVXZI010000003.1 Protein Homology CDS 201653 202237 . - 0 ID=cds-WP_003858007.1;Parent=gene-VMS06_RS05515;Dbxref=GenBank:WP_003858007.1;Name=WP_003858007.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=VMS06_RS05515;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_003858007.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 202474 203682 . + . ID=gene-VMS06_RS05520;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=VMS06_RS05520 NZ_JAVXZI010000003.1 Protein Homology CDS 202474 203682 . + 0 ID=cds-WP_063147634.1;Parent=gene-VMS06_RS05520;Dbxref=GenBank:WP_063147634.1;Name=WP_063147634.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460137.1;locus_tag=VMS06_RS05520;product=multidrug efflux MFS transporter MdtH;protein_id=WP_063147634.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 203803 204363 . + . ID=gene-VMS06_RS05525;Name=VMS06_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05525 NZ_JAVXZI010000003.1 Protein Homology CDS 203803 204363 . + 0 ID=cds-WP_023305855.1;Parent=gene-VMS06_RS05525;Dbxref=GenBank:WP_023305855.1;Name=WP_023305855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460135.1;locus_tag=VMS06_RS05525;product=lipoprotein;protein_id=WP_023305855.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 204492 205538 . + . ID=gene-VMS06_RS05530;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=VMS06_RS05530 NZ_JAVXZI010000003.1 Protein Homology CDS 204492 205538 . + 0 ID=cds-WP_063147635.1;Parent=gene-VMS06_RS05530;Dbxref=GenBank:WP_063147635.1;Name=WP_063147635.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846811.1;locus_tag=VMS06_RS05530;product=dihydroorotase;protein_id=WP_063147635.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 205615 205860 . + . ID=gene-VMS06_RS05535;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=VMS06_RS05535 NZ_JAVXZI010000003.1 Protein Homology CDS 205615 205860 . + 0 ID=cds-WP_022647715.1;Parent=gene-VMS06_RS05535;Dbxref=GenBank:WP_022647715.1;Name=WP_022647715.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460133.1;locus_tag=VMS06_RS05535;product=DNA damage-inducible protein I;protein_id=WP_022647715.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 206135 206389 . + . ID=gene-VMS06_RS05540;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=VMS06_RS05540 NZ_JAVXZI010000003.1 Protein Homology CDS 206135 206389 . + 0 ID=cds-WP_023299782.1;Parent=gene-VMS06_RS05540;Dbxref=GenBank:WP_023299782.1;Name=WP_023299782.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460132.3;locus_tag=VMS06_RS05540;product=biofilm formation regulator BssS;protein_id=WP_023299782.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 206504 207622 . + . ID=gene-VMS06_RS05545;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=VMS06_RS05545 NZ_JAVXZI010000003.1 Protein Homology CDS 206504 207622 . + 0 ID=cds-WP_063147636.1;Parent=gene-VMS06_RS05545;Dbxref=GenBank:WP_063147636.1;Name=WP_063147636.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570839.1;locus_tag=VMS06_RS05545;product=N-methyl-L-tryptophan oxidase;protein_id=WP_063147636.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 207673 207786 . + . ID=gene-VMS06_RS05550;Name=VMS06_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05550 NZ_JAVXZI010000003.1 Protein Homology CDS 207673 207786 . + 0 ID=cds-WP_063147637.1;Parent=gene-VMS06_RS05550;Dbxref=GenBank:WP_063147637.1;Name=WP_063147637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003846814.1;locus_tag=VMS06_RS05550;product=YceO family protein;protein_id=WP_063147637.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 208013 208579 . + . ID=gene-VMS06_RS05555;Name=VMS06_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05555 NZ_JAVXZI010000003.1 Protein Homology CDS 208013 208579 . + 0 ID=cds-WP_022647712.1;Parent=gene-VMS06_RS05555;Dbxref=GenBank:WP_022647712.1;Name=WP_022647712.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500829.1;locus_tag=VMS06_RS05555;product=cytochrome b;protein_id=WP_022647712.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 208581 209159 . + . ID=gene-VMS06_RS05560;Name=VMS06_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05560 NZ_JAVXZI010000003.1 Protein Homology CDS 208581 209159 . + 0 ID=cds-WP_022647711.1;Parent=gene-VMS06_RS05560;Dbxref=GenBank:WP_022647711.1;Name=WP_022647711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884691.1;locus_tag=VMS06_RS05560;product=YceI family protein;protein_id=WP_022647711.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 209198 210247 . - . ID=gene-VMS06_RS05565;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=protein_coding;gene_synonym=yceA;locus_tag=VMS06_RS05565 NZ_JAVXZI010000003.1 Protein Homology CDS 209198 210247 . - 0 ID=cds-WP_046618367.1;Parent=gene-VMS06_RS05565;Dbxref=GenBank:WP_046618367.1;Name=WP_046618367.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884692.1;locus_tag=VMS06_RS05565;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;protein_id=WP_046618367.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 210466 211392 . + . ID=gene-VMS06_RS05570;Name=VMS06_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05570 NZ_JAVXZI010000003.1 Protein Homology CDS 210466 211392 . + 0 ID=cds-WP_023305852.1;Parent=gene-VMS06_RS05570;Dbxref=GenBank:WP_023305852.1;Name=WP_023305852.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309459.1;locus_tag=VMS06_RS05570;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_023305852.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 211534 212769 . + . ID=gene-VMS06_RS05575;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=VMS06_RS05575 NZ_JAVXZI010000003.1 Protein Homology CDS 211534 212769 . + 0 ID=cds-WP_046618369.1;Parent=gene-VMS06_RS05575;Dbxref=GenBank:WP_046618369.1;Name=WP_046618369.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384746.1;locus_tag=VMS06_RS05575;product=multidrug efflux MFS transporter MdtG;protein_id=WP_046618369.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 212849 213223 . + . ID=gene-VMS06_RS05580;Name=VMS06_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05580 NZ_JAVXZI010000003.1 Protein Homology CDS 212849 213223 . + 0 ID=cds-WP_003858026.1;Parent=gene-VMS06_RS05580;Dbxref=GenBank:WP_003858026.1;Name=WP_003858026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309456.2;locus_tag=VMS06_RS05580;product=MysB family protein;protein_id=WP_003858026.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 213231 213458 . - . ID=gene-VMS06_RS05585;Name=VMS06_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05585 NZ_JAVXZI010000003.1 Protein Homology CDS 213231 213458 . - 0 ID=cds-WP_003858030.1;Parent=gene-VMS06_RS05585;Dbxref=GenBank:WP_003858030.1;Name=WP_003858030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097162.1;locus_tag=VMS06_RS05585;product=YceK/YidQ family lipoprotein;protein_id=WP_003858030.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 213543 216071 . - . ID=gene-VMS06_RS05590;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=VMS06_RS05590 NZ_JAVXZI010000003.1 Protein Homology CDS 213543 216071 . - 0 ID=cds-WP_063147638.1;Parent=gene-VMS06_RS05590;Dbxref=GenBank:WP_063147638.1;Name=WP_063147638.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384748.1;locus_tag=VMS06_RS05590;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_063147638.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 216064 217617 . - . ID=gene-VMS06_RS05595;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=VMS06_RS05595 NZ_JAVXZI010000003.1 Protein Homology CDS 216064 217617 . - 0 ID=cds-WP_032622136.1;Parent=gene-VMS06_RS05595;Dbxref=GenBank:WP_032622136.1;Name=WP_032622136.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226239.1;locus_tag=VMS06_RS05595;product=glucans biosynthesis protein MdoG;protein_id=WP_032622136.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 217873 219012 . + . ID=gene-VMS06_RS05600;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=VMS06_RS05600 NZ_JAVXZI010000003.1 Protein Homology CDS 217873 219012 . + 0 ID=cds-WP_022647705.1;Parent=gene-VMS06_RS05600;Dbxref=GenBank:WP_022647705.1;Name=WP_022647705.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570848.1;locus_tag=VMS06_RS05600;product=glucans biosynthesis protein MdoC;protein_id=WP_022647705.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 219054 219590 . - . ID=gene-VMS06_RS05605;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=VMS06_RS05605 NZ_JAVXZI010000003.1 Protein Homology CDS 219054 219590 . - 0 ID=cds-WP_038415816.1;Parent=gene-VMS06_RS05605;Dbxref=GenBank:WP_038415816.1;Name=WP_038415816.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858037.1;locus_tag=VMS06_RS05605;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_038415816.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 219671 219991 . - . ID=gene-VMS06_RS05610;Name=VMS06_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05610 NZ_JAVXZI010000003.1 Protein Homology CDS 219671 219991 . - 0 ID=cds-WP_063146125.1;Parent=gene-VMS06_RS05610;Dbxref=GenBank:WP_063146125.1;Name=WP_063146125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858038.1;locus_tag=VMS06_RS05610;product=type 1 fimbrial protein;protein_id=WP_063146125.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 220145 220477 . - . ID=gene-VMS06_RS05615;Name=csgC;gbkey=Gene;gene=csgC;gene_biotype=protein_coding;locus_tag=VMS06_RS05615 NZ_JAVXZI010000003.1 Protein Homology CDS 220145 220477 . - 0 ID=cds-WP_023299776.1;Parent=gene-VMS06_RS05615;Dbxref=GenBank:WP_023299776.1;Name=WP_023299776.1;gbkey=CDS;gene=csgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384752.1;locus_tag=VMS06_RS05615;product=curli assembly chaperone CsgC;protein_id=WP_023299776.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 220534 220989 . - . ID=gene-VMS06_RS05620;Name=csgA;gbkey=Gene;gene=csgA;gene_biotype=protein_coding;locus_tag=VMS06_RS05620 NZ_JAVXZI010000003.1 Protein Homology CDS 220534 220989 . - 0 ID=cds-WP_003858043.1;Parent=gene-VMS06_RS05620;Dbxref=GenBank:WP_003858043.1;Name=WP_003858043.1;gbkey=CDS;gene=csgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309447.1;locus_tag=VMS06_RS05620;product=curli major subunit CsgA;protein_id=WP_003858043.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 221029 221484 . - . ID=gene-VMS06_RS05625;Name=csgB;gbkey=Gene;gene=csgB;gene_biotype=protein_coding;locus_tag=VMS06_RS05625 NZ_JAVXZI010000003.1 Protein Homology CDS 221029 221484 . - 0 ID=cds-WP_023299774.1;Parent=gene-VMS06_RS05625;Dbxref=GenBank:WP_023299774.1;Name=WP_023299774.1;gbkey=CDS;gene=csgB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706951.2;locus_tag=VMS06_RS05625;product=curli minor subunit CsgB;protein_id=WP_023299774.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 221573 221929 . + . ID=gene-VMS06_RS05630;Name=VMS06_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05630 NZ_JAVXZI010000003.1 GeneMarkS-2+ CDS 221573 221929 . + 0 ID=cds-WP_127341665.1;Parent=gene-VMS06_RS05630;Dbxref=GenBank:WP_127341665.1;Name=WP_127341665.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS05630;product=hypothetical protein;protein_id=WP_127341665.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 222228 222878 . + . ID=gene-VMS06_RS05635;Name=csgD;gbkey=Gene;gene=csgD;gene_biotype=protein_coding;locus_tag=VMS06_RS05635 NZ_JAVXZI010000003.1 Protein Homology CDS 222228 222878 . + 0 ID=cds-WP_063147639.1;Parent=gene-VMS06_RS05635;Dbxref=GenBank:WP_063147639.1;Name=WP_063147639.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=csgD;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460113.1;locus_tag=VMS06_RS05635;product=biofilm master transcriptional regulator CsgD;protein_id=WP_063147639.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 222883 223272 . + . ID=gene-VMS06_RS05640;Name=csgE;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=VMS06_RS05640 NZ_JAVXZI010000003.1 Protein Homology CDS 222883 223272 . + 0 ID=cds-WP_003858052.1;Parent=gene-VMS06_RS05640;Dbxref=GenBank:WP_003858052.1;Name=WP_003858052.1;gbkey=CDS;gene=csgE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309443.1;locus_tag=VMS06_RS05640;product=curli production assembly/transport protein CsgE;protein_id=WP_003858052.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 223299 223715 . + . ID=gene-VMS06_RS05645;Name=csgF;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=VMS06_RS05645 NZ_JAVXZI010000003.1 Protein Homology CDS 223299 223715 . + 0 ID=cds-WP_003858054.1;Parent=gene-VMS06_RS05645;Dbxref=GenBank:WP_003858054.1;Name=WP_003858054.1;gbkey=CDS;gene=csgF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069736.1;locus_tag=VMS06_RS05645;product=curli production assembly/transport protein CsgF;protein_id=WP_003858054.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 223742 224575 . + . ID=gene-VMS06_RS05650;Name=csgG;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=VMS06_RS05650 NZ_JAVXZI010000003.1 Protein Homology CDS 223742 224575 . + 0 ID=cds-WP_023299773.1;Parent=gene-VMS06_RS05650;Dbxref=GenBank:WP_023299773.1;Name=WP_023299773.1;gbkey=CDS;gene=csgG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460110.1;locus_tag=VMS06_RS05650;product=curli production assembly/transport protein CsgG;protein_id=WP_023299773.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 224619 225101 . - . ID=gene-VMS06_RS05655;Name=VMS06_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05655 NZ_JAVXZI010000003.1 Protein Homology CDS 224619 225101 . - 0 ID=cds-WP_072202167.1;Parent=gene-VMS06_RS05655;Dbxref=GenBank:WP_072202167.1;Name=WP_072202167.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156175.1;locus_tag=VMS06_RS05655;product=DUF1097 domain-containing protein;protein_id=WP_072202167.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 225198 225752 . - . ID=gene-VMS06_RS05660;Name=VMS06_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05660 NZ_JAVXZI010000003.1 Protein Homology CDS 225198 225752 . - 0 ID=cds-WP_022647698.1;Parent=gene-VMS06_RS05660;Dbxref=GenBank:WP_022647698.1;Name=WP_022647698.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415553.1;locus_tag=VMS06_RS05660;product=TorD/DmsD family molecular chaperone;protein_id=WP_022647698.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 225772 226509 . - . ID=gene-VMS06_RS05665;Name=VMS06_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05665 NZ_JAVXZI010000003.1 Protein Homology CDS 225772 226509 . - 0 ID=cds-WP_022647697.1;Parent=gene-VMS06_RS05665;Dbxref=GenBank:WP_022647697.1;Name=WP_022647697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309438.1;locus_tag=VMS06_RS05665;product=phosphatase;protein_id=WP_022647697.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 226594 227532 . - . ID=gene-VMS06_RS05670;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=VMS06_RS05670 NZ_JAVXZI010000003.1 Protein Homology CDS 226594 227532 . - 0 ID=cds-WP_063147640.1;Parent=gene-VMS06_RS05670;Dbxref=GenBank:WP_063147640.1;Name=WP_063147640.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500851.1;locus_tag=VMS06_RS05670;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_063147640.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 227762 227849 . + . ID=gene-VMS06_RS05675;Name=VMS06_RS05675;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS05675 NZ_JAVXZI010000003.1 tRNAscan-SE tRNA 227762 227849 . + . ID=rna-VMS06_RS05675;Parent=gene-VMS06_RS05675;anticodon=(pos:227796..227798);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS05675;product=tRNA-Ser NZ_JAVXZI010000003.1 tRNAscan-SE exon 227762 227849 . + . ID=exon-VMS06_RS05675-1;Parent=rna-VMS06_RS05675;anticodon=(pos:227796..227798);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS05675;product=tRNA-Ser NZ_JAVXZI010000003.1 RefSeq gene 227897 228033 . + . ID=gene-VMS06_RS05680;Name=VMS06_RS05680;gbkey=Gene;gene_biotype=ncRNA;locus_tag=VMS06_RS05680 NZ_JAVXZI010000003.1 cmsearch ncRNA 227897 228033 . + . ID=rna-VMS06_RS05680;Parent=gene-VMS06_RS05680;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS05680;product=RtT sRNA NZ_JAVXZI010000003.1 cmsearch exon 227897 228033 . + . ID=exon-VMS06_RS05680-1;Parent=rna-VMS06_RS05680;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS05680;product=RtT sRNA NZ_JAVXZI010000003.1 RefSeq gene 228277 229182 . - . ID=gene-VMS06_RS05685;Name=VMS06_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05685 NZ_JAVXZI010000003.1 Protein Homology CDS 228277 229182 . - 0 ID=cds-WP_023299771.1;Parent=gene-VMS06_RS05685;Dbxref=GenBank:WP_023299771.1;Name=WP_023299771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226231.1;locus_tag=VMS06_RS05685;product=LysR family transcriptional regulator;protein_id=WP_023299771.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 229292 230152 . + . ID=gene-VMS06_RS05690;Name=VMS06_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05690 NZ_JAVXZI010000003.1 Protein Homology CDS 229292 230152 . + 0 ID=cds-WP_022647694.1;Parent=gene-VMS06_RS05690;Dbxref=GenBank:WP_022647694.1;Name=WP_022647694.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459927.1;locus_tag=VMS06_RS05690;product=pirin family protein;protein_id=WP_022647694.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 230173 230850 . + . ID=gene-VMS06_RS05695;Name=VMS06_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05695 NZ_JAVXZI010000003.1 Protein Homology CDS 230173 230850 . + 0 ID=cds-WP_003858068.1;Parent=gene-VMS06_RS05695;Dbxref=GenBank:WP_003858068.1;Name=WP_003858068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226229.1;locus_tag=VMS06_RS05695;product=isochorismatase family protein;protein_id=WP_003858068.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 230988 231075 . + . ID=gene-VMS06_RS05700;Name=VMS06_RS05700;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS05700 NZ_JAVXZI010000003.1 tRNAscan-SE tRNA 230988 231075 . + . ID=rna-VMS06_RS05700;Parent=gene-VMS06_RS05700;anticodon=(pos:231022..231024);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS05700;product=tRNA-Ser NZ_JAVXZI010000003.1 tRNAscan-SE exon 230988 231075 . + . ID=exon-VMS06_RS05700-1;Parent=rna-VMS06_RS05700;anticodon=(pos:231022..231024);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS05700;product=tRNA-Ser NZ_JAVXZI010000003.1 RefSeq gene 231290 232795 . - . ID=gene-VMS06_RS05705;Name=VMS06_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05705 NZ_JAVXZI010000003.1 Protein Homology CDS 231290 232795 . - 0 ID=cds-WP_022647693.1;Parent=gene-VMS06_RS05705;Dbxref=GenBank:WP_022647693.1;Name=WP_022647693.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693655.1;locus_tag=VMS06_RS05705;product=alanine/glycine:cation symporter family protein;protein_id=WP_022647693.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 233215 234006 . - . ID=gene-VMS06_RS05710;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=VMS06_RS05710 NZ_JAVXZI010000003.1 Protein Homology CDS 233215 234006 . - 0 ID=cds-WP_017384762.1;Parent=gene-VMS06_RS05710;Dbxref=GenBank:WP_017384762.1;Name=WP_017384762.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384762.1;locus_tag=VMS06_RS05710;product=phosphate starvation-inducible protein PhoH;protein_id=WP_017384762.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 234506 235789 . - . ID=gene-VMS06_RS05715;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=VMS06_RS05715 NZ_JAVXZI010000003.1 Protein Homology CDS 234506 235789 . - 0 ID=cds-WP_023305843.1;Parent=gene-VMS06_RS05715;Dbxref=GenBank:WP_023305843.1;Name=WP_023305843.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503508.1;locus_tag=VMS06_RS05715;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_023305843.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 235793 236920 . - . ID=gene-VMS06_RS05720;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=VMS06_RS05720 NZ_JAVXZI010000003.1 Protein Homology CDS 235793 236920 . - 0 ID=cds-WP_022647690.1;Parent=gene-VMS06_RS05720;Dbxref=GenBank:WP_022647690.1;Name=WP_022647690.1;Ontology_term=GO:0006826;gbkey=CDS;gene=efeO;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226224.1;locus_tag=VMS06_RS05720;product=iron uptake system protein EfeO;protein_id=WP_022647690.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 236962 237795 . - . ID=gene-VMS06_RS05725;Name=efeU;gbkey=Gene;gene=efeU;gene_biotype=protein_coding;locus_tag=VMS06_RS05725 NZ_JAVXZI010000003.1 Protein Homology CDS 236962 237795 . - 0 ID=cds-WP_032624499.1;Parent=gene-VMS06_RS05725;Dbxref=GenBank:WP_032624499.1;Name=WP_032624499.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;gene=efeU;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097186.1;locus_tag=VMS06_RS05725;product=iron uptake transporter permease EfeU;protein_id=WP_032624499.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 238047 239231 . + . ID=gene-VMS06_RS05730;Name=VMS06_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05730 NZ_JAVXZI010000003.1 Protein Homology CDS 238047 239231 . + 0 ID=cds-WP_323630620.1;Parent=gene-VMS06_RS05730;Dbxref=GenBank:WP_323630620.1;Name=WP_323630620.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014729164.1;locus_tag=VMS06_RS05730;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_323630620.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 239302 239721 . - . ID=gene-VMS06_RS05735;Name=VMS06_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05735 NZ_JAVXZI010000003.1 Protein Homology CDS 239302 239721 . - 0 ID=cds-WP_045307917.1;Parent=gene-VMS06_RS05735;Dbxref=GenBank:WP_045307917.1;Name=WP_045307917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016939.1;locus_tag=VMS06_RS05735;product=DUF3574 domain-containing protein;protein_id=WP_045307917.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 239791 241299 . - . ID=gene-VMS06_RS05740;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=VMS06_RS05740 NZ_JAVXZI010000003.1 Protein Homology CDS 239791 241299 . - 0 ID=cds-WP_022647686.1;Parent=gene-VMS06_RS05740;Dbxref=GenBank:WP_022647686.1;Name=WP_022647686.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460097.1;locus_tag=VMS06_RS05740;product=sodium/proline symporter PutP;protein_id=WP_022647686.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 241722 245684 . + . ID=gene-VMS06_RS05745;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=VMS06_RS05745 NZ_JAVXZI010000003.1 Protein Homology CDS 241722 245684 . + 0 ID=cds-WP_063147642.1;Parent=gene-VMS06_RS05745;Dbxref=GenBank:WP_063147642.1;Name=WP_063147642.1;Ontology_term=GO:0006355,GO:0055129,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415534.1;locus_tag=VMS06_RS05745;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_063147642.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 245786 246181 . + . ID=gene-VMS06_RS05750;Name=VMS06_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05750 NZ_JAVXZI010000003.1 Protein Homology CDS 245786 246181 . + 0 ID=cds-WP_022647684.1;Parent=gene-VMS06_RS05750;Dbxref=GenBank:WP_022647684.1;Name=WP_022647684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499817.1;locus_tag=VMS06_RS05750;product=lysozyme inhibitor LprI family protein;protein_id=WP_022647684.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 246178 246816 . - . ID=gene-VMS06_RS05755;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=VMS06_RS05755 NZ_JAVXZI010000003.1 Protein Homology CDS 246178 246816 . - 0 ID=cds-WP_063147643.1;Parent=gene-VMS06_RS05755;Dbxref=GenBank:WP_063147643.1;Name=WP_063147643.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309286.1;locus_tag=VMS06_RS05755;product=HTH-type transcriptional regulator RutR;protein_id=WP_063147643.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 247062 248153 . + . ID=gene-VMS06_RS05760;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=VMS06_RS05760 NZ_JAVXZI010000003.1 Protein Homology CDS 247062 248153 . + 0 ID=cds-WP_063147644.1;Parent=gene-VMS06_RS05760;Dbxref=GenBank:WP_063147644.1;Name=WP_063147644.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309285.4;locus_tag=VMS06_RS05760;product=pyrimidine utilization protein A;protein_id=WP_063147644.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 248153 248842 . + . ID=gene-VMS06_RS05765;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=VMS06_RS05765 NZ_JAVXZI010000003.1 Protein Homology CDS 248153 248842 . + 0 ID=cds-WP_022647681.1;Parent=gene-VMS06_RS05765;Dbxref=GenBank:WP_022647681.1;Name=WP_022647681.1;Ontology_term=GO:0016811;gbkey=CDS;gene=rutB;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001697026.1;locus_tag=VMS06_RS05765;product=pyrimidine utilization protein B;protein_id=WP_022647681.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 248854 249240 . + . ID=gene-VMS06_RS05770;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=VMS06_RS05770 NZ_JAVXZI010000003.1 Protein Homology CDS 248854 249240 . + 0 ID=cds-WP_015570870.1;Parent=gene-VMS06_RS05770;Dbxref=GenBank:WP_015570870.1;Name=WP_015570870.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001126780.1;locus_tag=VMS06_RS05770;product=pyrimidine utilization protein C;protein_id=WP_015570870.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 249248 250048 . + . ID=gene-VMS06_RS05775;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=VMS06_RS05775 NZ_JAVXZI010000003.1 Protein Homology CDS 249248 250048 . + 0 ID=cds-WP_063147645.1;Parent=gene-VMS06_RS05775;Dbxref=GenBank:WP_063147645.1;Name=WP_063147645.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309282.1;locus_tag=VMS06_RS05775;product=pyrimidine utilization protein D;protein_id=WP_063147645.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 250058 250648 . + . ID=gene-VMS06_RS05780;Name=VMS06_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05780 NZ_JAVXZI010000003.1 Protein Homology CDS 250058 250648 . + 0 ID=cds-WP_022647679.1;Parent=gene-VMS06_RS05780;Dbxref=GenBank:WP_022647679.1;Name=WP_022647679.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831385.1;locus_tag=VMS06_RS05780;product=malonic semialdehyde reductase;protein_id=WP_022647679.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 250658 251152 . + . ID=gene-VMS06_RS05785;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=VMS06_RS05785 NZ_JAVXZI010000003.1 Protein Homology CDS 250658 251152 . + 0 ID=cds-WP_058676850.1;Parent=gene-VMS06_RS05785;Dbxref=GenBank:WP_058676850.1;Name=WP_058676850.1;Ontology_term=GO:0008752;gbkey=CDS;gene=rutF;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415527.4;locus_tag=VMS06_RS05785;product=NADH-dependent FMN reductase RutF;protein_id=WP_058676850.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 251174 252490 . + . ID=gene-VMS06_RS05790;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=VMS06_RS05790 NZ_JAVXZI010000003.1 Protein Homology CDS 251174 252490 . + 0 ID=cds-WP_063147646.1;Parent=gene-VMS06_RS05790;Dbxref=GenBank:WP_063147646.1;Name=WP_063147646.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010429495.1;locus_tag=VMS06_RS05790;product=pyrimidine utilization transport protein G;protein_id=WP_063147646.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 252593 253513 . - . ID=gene-VMS06_RS05795;Name=VMS06_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05795 NZ_JAVXZI010000003.1 Protein Homology CDS 252593 253513 . - 0 ID=cds-WP_063147647.1;Parent=gene-VMS06_RS05795;Dbxref=GenBank:WP_063147647.1;Name=WP_063147647.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384777.1;locus_tag=VMS06_RS05795;product=DMT family transporter;protein_id=WP_063147647.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 253630 253800 . - . ID=gene-VMS06_RS05800;Name=VMS06_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05800 NZ_JAVXZI010000003.1 Protein Homology CDS 253630 253800 . - 0 ID=cds-WP_001273664.1;Parent=gene-VMS06_RS05800;Dbxref=GenBank:WP_001273664.1;Name=WP_001273664.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097201.1;locus_tag=VMS06_RS05800;product=con-10 family general stress protein;protein_id=WP_001273664.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 254192 254788 . + . ID=gene-VMS06_RS05805;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=VMS06_RS05805 NZ_JAVXZI010000003.1 Protein Homology CDS 254192 254788 . + 0 ID=cds-WP_022647675.1;Parent=gene-VMS06_RS05805;Dbxref=GenBank:WP_022647675.1;Name=WP_022647675.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226204.1;locus_tag=VMS06_RS05805;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_022647675.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 254807 255034 . + . ID=gene-VMS06_RS05810;Name=VMS06_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05810 NZ_JAVXZI010000003.1 Protein Homology CDS 254807 255034 . + 0 ID=cds-WP_022647674.1;Parent=gene-VMS06_RS05810;Dbxref=GenBank:WP_022647674.1;Name=WP_022647674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=VMS06_RS05810;product=YccJ family protein;protein_id=WP_022647674.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 255066 256307 . - . ID=gene-VMS06_RS05815;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=VMS06_RS05815 NZ_JAVXZI010000003.1 Protein Homology CDS 255066 256307 . - 0 ID=cds-WP_045622221.1;Parent=gene-VMS06_RS05815;Dbxref=GenBank:WP_045622221.1;Name=WP_045622221.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309185.1;locus_tag=VMS06_RS05815;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_045622221.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 256413 256913 . - . ID=gene-VMS06_RS05820;Name=VMS06_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05820 NZ_JAVXZI010000003.1 Protein Homology CDS 256413 256913 . - 0 ID=cds-WP_045308873.1;Parent=gene-VMS06_RS05820;Dbxref=GenBank:WP_045308873.1;Name=WP_045308873.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858113.1;locus_tag=VMS06_RS05820;product=DedA family protein;protein_id=WP_045308873.1;transl_table=11 NZ_JAVXZI010000003.1 cmsearch riboswitch 257072 257241 . + . ID=id-NZ_JAVXZI010000003.1:257072..257241;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVXZI010000003.1 RefSeq gene 257302 258303 . + . ID=gene-VMS06_RS05825;Name=VMS06_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05825 NZ_JAVXZI010000003.1 Protein Homology CDS 257302 258303 . + 0 ID=cds-WP_003858115.1;Parent=gene-VMS06_RS05825;Dbxref=GenBank:WP_003858115.1;Name=WP_003858115.1;Ontology_term=GO:0015693,GO:0000287,GO:0005524,GO:0015095;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858115.1;locus_tag=VMS06_RS05825;product=magnesium transporter;protein_id=WP_003858115.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 258346 258433 . - . ID=gene-VMS06_RS05830;Name=VMS06_RS05830;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS05830 NZ_JAVXZI010000003.1 tRNAscan-SE tRNA 258346 258433 . - . ID=rna-VMS06_RS05830;Parent=gene-VMS06_RS05830;anticodon=(pos:complement(258397..258399));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS05830;product=tRNA-Ser NZ_JAVXZI010000003.1 tRNAscan-SE exon 258346 258433 . - . ID=exon-VMS06_RS05830-1;Parent=rna-VMS06_RS05830;anticodon=(pos:complement(258397..258399));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS05830;product=tRNA-Ser NZ_JAVXZI010000003.1 RefSeq gene 258711 259562 . + . ID=gene-VMS06_RS05835;Name=VMS06_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05835 NZ_JAVXZI010000003.1 GeneMarkS-2+ CDS 258711 259562 . + 0 ID=cds-WP_023299756.1;Parent=gene-VMS06_RS05835;Dbxref=GenBank:WP_023299756.1;Name=WP_023299756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS05835;product=hypothetical protein;protein_id=WP_023299756.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 259580 260107 . + . ID=gene-VMS06_RS05840;Name=VMS06_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05840 NZ_JAVXZI010000003.1 Protein Homology CDS 259580 260107 . + 0 ID=cds-WP_023305829.1;Parent=gene-VMS06_RS05840;Dbxref=GenBank:WP_023305829.1;Name=WP_023305829.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570883.1;locus_tag=VMS06_RS05840;product=helix-turn-helix domain-containing protein;protein_id=WP_023305829.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 260139 261752 . - . ID=gene-VMS06_RS05845;Name=VMS06_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05845 NZ_JAVXZI010000003.1 Protein Homology CDS 260139 261752 . - 0 ID=cds-WP_063147648.1;Parent=gene-VMS06_RS05845;Dbxref=GenBank:WP_063147648.1;Name=WP_063147648.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384783.1;locus_tag=VMS06_RS05845;product=mechanosensitive ion channel family protein;protein_id=WP_063147648.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 261926 262933 . + . ID=gene-VMS06_RS05850;Name=VMS06_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05850 NZ_JAVXZI010000003.1 Protein Homology CDS 261926 262933 . + 0 ID=cds-WP_046618412.1;Parent=gene-VMS06_RS05850;Dbxref=GenBank:WP_046618412.1;Name=WP_046618412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858120.1;locus_tag=VMS06_RS05850;product=ABC transporter substrate-binding protein;protein_id=WP_046618412.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 262930 263961 . + . ID=gene-VMS06_RS05855;Name=VMS06_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05855 NZ_JAVXZI010000003.1 Protein Homology CDS 262930 263961 . + 0 ID=cds-WP_038415793.1;Parent=gene-VMS06_RS05855;Dbxref=GenBank:WP_038415793.1;Name=WP_038415793.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570886.1;locus_tag=VMS06_RS05855;product=FecCD family ABC transporter permease;protein_id=WP_038415793.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 263958 264794 . + . ID=gene-VMS06_RS05860;Name=VMS06_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05860 NZ_JAVXZI010000003.1 Protein Homology CDS 263958 264794 . + 0 ID=cds-WP_226856320.1;Parent=gene-VMS06_RS05860;Dbxref=GenBank:WP_226856320.1;Name=WP_226856320.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097242.1;locus_tag=VMS06_RS05860;product=ABC transporter ATP-binding protein;protein_id=WP_226856320.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 264781 264868 . - . ID=gene-VMS06_RS05865;Name=VMS06_RS05865;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS05865 NZ_JAVXZI010000003.1 tRNAscan-SE tRNA 264781 264868 . - . ID=rna-VMS06_RS05865;Parent=gene-VMS06_RS05865;anticodon=(pos:complement(264832..264834));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS05865;product=tRNA-Ser NZ_JAVXZI010000003.1 tRNAscan-SE exon 264781 264868 . - . ID=exon-VMS06_RS05865-1;Parent=rna-VMS06_RS05865;anticodon=(pos:complement(264832..264834));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS05865;product=tRNA-Ser NZ_JAVXZI010000003.1 RefSeq gene 265013 266641 . - . ID=gene-VMS06_RS05870;Name=VMS06_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05870 NZ_JAVXZI010000003.1 Protein Homology CDS 265013 266641 . - 0 ID=cds-WP_045623328.1;Parent=gene-VMS06_RS05870;Dbxref=GenBank:WP_045623328.1;Name=WP_045623328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010429388.1;locus_tag=VMS06_RS05870;product=ABC transporter substrate-binding protein;protein_id=WP_045623328.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 266912 267571 . + . ID=gene-VMS06_RS05875;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=VMS06_RS05875 NZ_JAVXZI010000003.1 Protein Homology CDS 266912 267571 . + 0 ID=cds-WP_003858127.1;Parent=gene-VMS06_RS05875;Dbxref=GenBank:WP_003858127.1;Name=WP_003858127.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=VMS06_RS05875;product=FtsH protease modulator YccA;protein_id=WP_003858127.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 267660 267989 . + . ID=gene-VMS06_RS05880;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=VMS06_RS05880 NZ_JAVXZI010000003.1 Protein Homology CDS 267660 267989 . + 0 ID=cds-WP_003858129.1;Parent=gene-VMS06_RS05880;Dbxref=GenBank:WP_003858129.1;Name=WP_003858129.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309080.2;locus_tag=VMS06_RS05880;product=sulfurtransferase TusE;protein_id=WP_003858129.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 267986 268267 . - . ID=gene-VMS06_RS05885;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=VMS06_RS05885 NZ_JAVXZI010000003.1 Protein Homology CDS 267986 268267 . - 0 ID=cds-WP_003858131.1;Parent=gene-VMS06_RS05885;Dbxref=GenBank:WP_003858131.1;Name=WP_003858131.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004849561.1;locus_tag=VMS06_RS05885;product=acylphosphatase;protein_id=WP_003858131.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 268361 269551 . + . ID=gene-VMS06_RS05890;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=VMS06_RS05890 NZ_JAVXZI010000003.1 Protein Homology CDS 268361 269551 . + 0 ID=cds-WP_022647663.1;Parent=gene-VMS06_RS05890;Dbxref=GenBank:WP_022647663.1;Name=WP_022647663.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415487.4;locus_tag=VMS06_RS05890;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_022647663.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 269612 269929 . + . ID=gene-VMS06_RS05895;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=VMS06_RS05895 NZ_JAVXZI010000003.1 Protein Homology CDS 269612 269929 . + 0 ID=cds-WP_003858136.1;Parent=gene-VMS06_RS05895;Dbxref=GenBank:WP_003858136.1;Name=WP_003858136.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123508.1;locus_tag=VMS06_RS05895;product=heat shock protein HspQ;protein_id=WP_003858136.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 269962 270375 . - . ID=gene-VMS06_RS05900;Name=VMS06_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05900 NZ_JAVXZI010000003.1 Protein Homology CDS 269962 270375 . - 0 ID=cds-WP_023299748.1;Parent=gene-VMS06_RS05900;Dbxref=GenBank:WP_023299748.1;Name=WP_023299748.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309076.1;locus_tag=VMS06_RS05900;product=CoA-binding protein;protein_id=WP_023299748.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 270547 271209 . + . ID=gene-VMS06_RS05905;Name=csgI;gbkey=Gene;gene=csgI;gene_biotype=protein_coding;gene_synonym=yccT;locus_tag=VMS06_RS05905 NZ_JAVXZI010000003.1 Protein Homology CDS 270547 271209 . + 0 ID=cds-WP_045308867.1;Parent=gene-VMS06_RS05905;Dbxref=GenBank:WP_045308867.1;Name=WP_045308867.1;gbkey=CDS;gene=csgI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001661108.1;locus_tag=VMS06_RS05905;product=curli synthesis inhibitor;protein_id=WP_045308867.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 271290 271748 . + . ID=gene-VMS06_RS05910;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=VMS06_RS05910 NZ_JAVXZI010000003.1 Protein Homology CDS 271290 271748 . + 0 ID=cds-WP_003858146.1;Parent=gene-VMS06_RS05910;Dbxref=GenBank:WP_003858146.1;Name=WP_003858146.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460050.1;locus_tag=VMS06_RS05910;product=methylglyoxal synthase;protein_id=WP_003858146.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 271802 273856 . - . ID=gene-VMS06_RS05915;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=VMS06_RS05915 NZ_JAVXZI010000003.1 Protein Homology CDS 271802 273856 . - 0 ID=cds-WP_063147649.1;Parent=gene-VMS06_RS05915;Dbxref=GenBank:WP_063147649.1;Name=WP_063147649.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415482.1;locus_tag=VMS06_RS05915;product=DNA helicase IV;protein_id=WP_063147649.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 273979 274425 . + . ID=gene-VMS06_RS05920;Name=VMS06_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05920 NZ_JAVXZI010000003.1 Protein Homology CDS 273979 274425 . + 0 ID=cds-WP_022647660.1;Parent=gene-VMS06_RS05920;Dbxref=GenBank:WP_022647660.1;Name=WP_022647660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415481.1;locus_tag=VMS06_RS05920;product=YccF domain-containing protein;protein_id=WP_022647660.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 274444 276606 . + . ID=gene-VMS06_RS05925;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=VMS06_RS05925 NZ_JAVXZI010000003.1 Protein Homology CDS 274444 276606 . + 0 ID=cds-WP_063147650.1;Parent=gene-VMS06_RS05925;Dbxref=GenBank:WP_063147650.1;Name=WP_063147650.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499925.1;locus_tag=VMS06_RS05925;product=YccS family putative transporter;protein_id=WP_063147650.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 276563 277189 . - . ID=gene-VMS06_RS05930;Name=VMS06_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05930 NZ_JAVXZI010000003.1 Protein Homology CDS 276563 277189 . - 0 ID=cds-WP_023315767.1;Parent=gene-VMS06_RS05930;Dbxref=GenBank:WP_023315767.1;Name=WP_023315767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499926.1;locus_tag=VMS06_RS05930;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_023315767.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 277407 277916 . + . ID=gene-VMS06_RS05935;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=VMS06_RS05935 NZ_JAVXZI010000003.1 Protein Homology CDS 277407 277916 . + 0 ID=cds-WP_032610196.1;Parent=gene-VMS06_RS05935;Dbxref=GenBank:WP_032610196.1;Name=WP_032610196.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000288734.1;locus_tag=VMS06_RS05935;product=SOS-induced cell division inhibitor SulA;protein_id=WP_032610196.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 278273 279325 . + . ID=gene-VMS06_RS05940;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=VMS06_RS05940 NZ_JAVXZI010000003.1 Protein Homology CDS 278273 279325 . + 0 ID=cds-WP_017694761.1;Parent=gene-VMS06_RS05940;Dbxref=GenBank:WP_017694761.1;Name=WP_017694761.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460044.1;locus_tag=VMS06_RS05940;product=porin OmpA;protein_id=WP_017694761.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 279391 279843 . - . ID=gene-VMS06_RS05945;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=VMS06_RS05945 NZ_JAVXZI010000003.1 Protein Homology CDS 279391 279843 . - 0 ID=cds-WP_063147651.1;Parent=gene-VMS06_RS05945;Dbxref=GenBank:WP_063147651.1;Name=WP_063147651.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460043.1;locus_tag=VMS06_RS05945;product=macrodomain Ter protein MatP;protein_id=WP_063147651.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 280030 281790 . + . ID=gene-VMS06_RS05950;Name=VMS06_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05950 NZ_JAVXZI010000003.1 Protein Homology CDS 280030 281790 . + 0 ID=cds-WP_023305819.1;Parent=gene-VMS06_RS05950;Dbxref=GenBank:WP_023305819.1;Name=WP_023305819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384808.1;locus_tag=VMS06_RS05950;product=AAA family ATPase;protein_id=WP_023305819.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 281859 282377 . + . ID=gene-VMS06_RS05955;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=VMS06_RS05955 NZ_JAVXZI010000003.1 Protein Homology CDS 281859 282377 . + 0 ID=cds-WP_000227926.1;Parent=gene-VMS06_RS05955;Dbxref=GenBank:WP_000227926.1;Name=WP_000227926.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=VMS06_RS05955;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_000227926.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 282449 282616 . - . ID=gene-VMS06_RS05960;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=VMS06_RS05960 NZ_JAVXZI010000003.1 Protein Homology CDS 282449 282616 . - 0 ID=cds-WP_003858162.1;Parent=gene-VMS06_RS05960;Dbxref=GenBank:WP_003858162.1;Name=WP_003858162.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=VMS06_RS05960;product=ribosome modulation factor;protein_id=WP_003858162.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 282871 283437 . - . ID=gene-VMS06_RS05965;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=VMS06_RS05965 NZ_JAVXZI010000003.1 Protein Homology CDS 282871 283437 . - 0 ID=cds-WP_022647654.1;Parent=gene-VMS06_RS05965;Dbxref=GenBank:WP_022647654.1;Name=WP_022647654.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460039.1;locus_tag=VMS06_RS05965;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_022647654.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 283434 285074 . - . ID=gene-VMS06_RS05970;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=VMS06_RS05970 NZ_JAVXZI010000003.1 Protein Homology CDS 283434 285074 . - 0 ID=cds-WP_022647653.1;Parent=gene-VMS06_RS05970;Dbxref=GenBank:WP_022647653.1;Name=WP_022647653.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=VMS06_RS05970;product=intermembrane transport protein PqiB;protein_id=WP_022647653.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 285079 286332 . - . ID=gene-VMS06_RS05975;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=VMS06_RS05975 NZ_JAVXZI010000003.1 Protein Homology CDS 285079 286332 . - 0 ID=cds-WP_022647652.1;Parent=gene-VMS06_RS05975;Dbxref=GenBank:WP_022647652.1;Name=WP_022647652.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693685.1;locus_tag=VMS06_RS05975;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_022647652.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 286346 288253 . - . ID=gene-VMS06_RS05980;Name=VMS06_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05980 NZ_JAVXZI010000003.1 Protein Homology CDS 286346 288253 . - 0 ID=cds-WP_063147652.1;Parent=gene-VMS06_RS05980;Dbxref=GenBank:WP_063147652.1;Name=WP_063147652.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=VMS06_RS05980;product=ABC transporter ATP-binding protein;protein_id=WP_063147652.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 288266 290374 . - . ID=gene-VMS06_RS05985;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=VMS06_RS05985 NZ_JAVXZI010000003.1 Protein Homology CDS 288266 290374 . - 0 ID=cds-WP_032671569.1;Parent=gene-VMS06_RS05985;Dbxref=GenBank:WP_032671569.1;Name=WP_032671569.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016857.1;locus_tag=VMS06_RS05985;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_032671569.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 290473 291582 . + . ID=gene-VMS06_RS05990;Name=VMS06_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS05990 NZ_JAVXZI010000003.1 Protein Homology CDS 290473 291582 . + 0 ID=cds-WP_032624523.1;Parent=gene-VMS06_RS05990;Dbxref=GenBank:WP_032624523.1;Name=WP_032624523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831309.1;locus_tag=VMS06_RS05990;product=YcbX family protein;protein_id=WP_032624523.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 291579 292121 . - . ID=gene-VMS06_RS05995;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=VMS06_RS05995 NZ_JAVXZI010000003.1 Protein Homology CDS 291579 292121 . - 0 ID=cds-WP_023299740.1;Parent=gene-VMS06_RS05995;Dbxref=GenBank:WP_023299740.1;Name=WP_023299740.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460033.1;locus_tag=VMS06_RS05995;product=cell division protein ZapC;protein_id=WP_023299740.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 292288 293298 . - . ID=gene-VMS06_RS06000;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=VMS06_RS06000 NZ_JAVXZI010000003.1 Protein Homology CDS 292288 293298 . - 0 ID=cds-WP_015570907.1;Parent=gene-VMS06_RS06000;Dbxref=GenBank:WP_015570907.1;Name=WP_015570907.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309056.1;locus_tag=VMS06_RS06000;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_015570907.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 293548 294123 . + . ID=gene-VMS06_RS06005;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=VMS06_RS06005 NZ_JAVXZI010000003.1 Protein Homology CDS 293548 294123 . + 0 ID=cds-WP_022647647.1;Parent=gene-VMS06_RS06005;Dbxref=GenBank:WP_022647647.1;Name=WP_022647647.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884801.1;locus_tag=VMS06_RS06005;product=NADPH-dependent FMN reductase;protein_id=WP_022647647.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 294116 295078 . + . ID=gene-VMS06_RS06010;Name=VMS06_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06010 NZ_JAVXZI010000003.1 Protein Homology CDS 294116 295078 . + 0 ID=cds-WP_022647646.1;Parent=gene-VMS06_RS06010;Dbxref=GenBank:WP_022647646.1;Name=WP_022647646.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858181.1;locus_tag=VMS06_RS06010;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_022647646.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 295075 296220 . + . ID=gene-VMS06_RS06015;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=VMS06_RS06015 NZ_JAVXZI010000003.1 Protein Homology CDS 295075 296220 . + 0 ID=cds-WP_038415787.1;Parent=gene-VMS06_RS06015;Dbxref=GenBank:WP_038415787.1;Name=WP_038415787.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706856.1;locus_tag=VMS06_RS06015;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_038415787.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 296230 297021 . + . ID=gene-VMS06_RS06020;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=VMS06_RS06020 NZ_JAVXZI010000003.1 Protein Homology CDS 296230 297021 . + 0 ID=cds-WP_063147653.1;Parent=gene-VMS06_RS06020;Dbxref=GenBank:WP_063147653.1;Name=WP_063147653.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883238.1;locus_tag=VMS06_RS06020;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_063147653.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 297018 297788 . + . ID=gene-VMS06_RS06025;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=VMS06_RS06025 NZ_JAVXZI010000003.1 Protein Homology CDS 297018 297788 . + 0 ID=cds-WP_022647644.1;Parent=gene-VMS06_RS06025;Dbxref=GenBank:WP_022647644.1;Name=WP_022647644.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858186.1;locus_tag=VMS06_RS06025;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_022647644.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 297878 300490 . - . ID=gene-VMS06_RS06030;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=VMS06_RS06030 NZ_JAVXZI010000003.1 Protein Homology CDS 297878 300490 . - 0 ID=cds-WP_063147654.1;Parent=gene-VMS06_RS06030;Dbxref=GenBank:WP_063147654.1;Name=WP_063147654.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=VMS06_RS06030;product=aminopeptidase N;protein_id=WP_063147654.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 300744 301946 . + . ID=gene-VMS06_RS06035;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=VMS06_RS06035 NZ_JAVXZI010000003.1 Protein Homology CDS 300744 301946 . + 0 ID=cds-WP_023299736.1;Parent=gene-VMS06_RS06035;Dbxref=GenBank:WP_023299736.1;Name=WP_023299736.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415451.1;locus_tag=VMS06_RS06035;product=nicotinate phosphoribosyltransferase;protein_id=WP_023299736.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 302115 303515 . + . ID=gene-VMS06_RS06040;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=VMS06_RS06040 NZ_JAVXZI010000003.1 Protein Homology CDS 302115 303515 . + 0 ID=cds-WP_003858191.1;Parent=gene-VMS06_RS06040;Dbxref=GenBank:WP_003858191.1;Name=WP_003858191.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=VMS06_RS06040;product=asparagine--tRNA ligase;protein_id=WP_003858191.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 304122 305180 . + . ID=gene-VMS06_RS06045;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=VMS06_RS06045 NZ_JAVXZI010000003.1 Protein Homology CDS 304122 305180 . + 0 ID=cds-WP_022647640.1;Parent=gene-VMS06_RS06045;Dbxref=GenBank:WP_022647640.1;Name=WP_022647640.1;gbkey=CDS;gene=ompF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006174505.1;locus_tag=VMS06_RS06045;product=porin OmpF;protein_id=WP_022647640.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 305365 306555 . + . ID=gene-VMS06_RS06050;Name=VMS06_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06050 NZ_JAVXZI010000003.1 Protein Homology CDS 305365 306555 . + 0 ID=cds-WP_063843807.1;Parent=gene-VMS06_RS06050;Dbxref=GenBank:WP_063843807.1;Name=WP_063843807.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=VMS06_RS06050;product=amino acid aminotransferase;protein_id=WP_063843807.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 306608 307255 . - . ID=gene-VMS06_RS06055;Name=VMS06_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06055 NZ_JAVXZI010000003.1 Protein Homology CDS 306608 307255 . - 0 ID=cds-WP_063147656.1;Parent=gene-VMS06_RS06055;Dbxref=GenBank:WP_063147656.1;Name=WP_063147656.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035823.1;locus_tag=VMS06_RS06055;product=MBL fold metallo-hydrolase;protein_id=WP_063147656.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 307276 307827 . - . ID=gene-VMS06_RS06060;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=VMS06_RS06060 NZ_JAVXZI010000003.1 Protein Homology CDS 307276 307827 . - 0 ID=cds-WP_003858202.1;Parent=gene-VMS06_RS06060;Dbxref=GenBank:WP_003858202.1;Name=WP_003858202.1;Ontology_term=GO:0006508,GO:0009254,GO:0071555,GO:0004175,GO:0008237,GO:0046872;gbkey=CDS;gene=mepK;go_function=endopeptidase activity|0004175||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan turnover|0009254||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=VMS06_RS06060;product=peptidoglycan L%2CD-endopeptidase MepK;protein_id=WP_003858202.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 308003 309826 . - . ID=gene-VMS06_RS06065;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=VMS06_RS06065 NZ_JAVXZI010000003.1 Protein Homology CDS 308003 309826 . - 0 ID=cds-WP_063137584.1;Parent=gene-VMS06_RS06065;Dbxref=GenBank:WP_063137584.1;Name=WP_063137584.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459970.1;locus_tag=VMS06_RS06065;product=L%2CD-transpeptidase;protein_id=WP_063137584.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 310006 314454 . - . ID=gene-VMS06_RS06070;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=VMS06_RS06070 NZ_JAVXZI010000003.1 Protein Homology CDS 310006 314454 . - 0 ID=cds-WP_063147657.1;Parent=gene-VMS06_RS06070;Dbxref=GenBank:WP_063147657.1;Name=WP_063147657.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226132.1;locus_tag=VMS06_RS06070;product=chromosome partition protein MukB;protein_id=WP_063147657.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 314454 315158 . - . ID=gene-VMS06_RS06075;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=VMS06_RS06075 NZ_JAVXZI010000003.1 Protein Homology CDS 314454 315158 . - 0 ID=cds-WP_003858208.1;Parent=gene-VMS06_RS06075;Dbxref=GenBank:WP_003858208.1;Name=WP_003858208.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309033.1;locus_tag=VMS06_RS06075;product=chromosome partition protein MukE;protein_id=WP_003858208.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 315139 316461 . - . ID=gene-VMS06_RS06080;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=VMS06_RS06080 NZ_JAVXZI010000003.1 Protein Homology CDS 315139 316461 . - 0 ID=cds-WP_022647635.1;Parent=gene-VMS06_RS06080;Dbxref=GenBank:WP_022647635.1;Name=WP_022647635.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=VMS06_RS06080;product=chromosome partition protein MukF;protein_id=WP_022647635.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 316465 317244 . - . ID=gene-VMS06_RS06085;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=VMS06_RS06085 NZ_JAVXZI010000003.1 Protein Homology CDS 316465 317244 . - 0 ID=cds-WP_006809373.1;Parent=gene-VMS06_RS06085;Dbxref=GenBank:WP_006809373.1;Name=WP_006809373.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858212.1;locus_tag=VMS06_RS06085;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_006809373.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 317365 318144 . + . ID=gene-VMS06_RS06090;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=VMS06_RS06090 NZ_JAVXZI010000003.1 Protein Homology CDS 317365 318144 . + 0 ID=cds-WP_063137586.1;Parent=gene-VMS06_RS06090;Dbxref=GenBank:WP_063137586.1;Name=WP_063137586.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309030.1;locus_tag=VMS06_RS06090;product=envelope biogenesis factor ElyC;protein_id=WP_063137586.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 318121 319014 . - . ID=gene-VMS06_RS06095;Name=VMS06_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06095 NZ_JAVXZI010000003.1 Protein Homology CDS 318121 319014 . - 0 ID=cds-WP_023299729.1;Parent=gene-VMS06_RS06095;Dbxref=GenBank:WP_023299729.1;Name=WP_023299729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309029.1;locus_tag=VMS06_RS06095;product=YcbJ family phosphotransferase;protein_id=WP_023299729.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 319145 319891 . - . ID=gene-VMS06_RS06100;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=VMS06_RS06100 NZ_JAVXZI010000003.1 Protein Homology CDS 319145 319891 . - 0 ID=cds-WP_045308855.1;Parent=gene-VMS06_RS06100;Dbxref=GenBank:WP_045308855.1;Name=WP_045308855.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415438.1;locus_tag=VMS06_RS06100;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_045308855.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 319888 320070 . - . ID=gene-VMS06_RS06105;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=VMS06_RS06105 NZ_JAVXZI010000003.1 Protein Homology CDS 319888 320070 . - 0 ID=cds-WP_003858220.1;Parent=gene-VMS06_RS06105;Dbxref=GenBank:WP_003858220.1;Name=WP_003858220.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007664678.1;locus_tag=VMS06_RS06105;product=protein YcaR;protein_id=WP_003858220.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 320116 321345 . - . ID=gene-VMS06_RS06110;Name=VMS06_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06110 NZ_JAVXZI010000003.1 Protein Homology CDS 320116 321345 . - 0 ID=cds-WP_063147658.1;Parent=gene-VMS06_RS06110;Dbxref=GenBank:WP_063147658.1;Name=WP_063147658.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570965.1;locus_tag=VMS06_RS06110;product=winged helix-turn-helix domain-containing protein;protein_id=WP_063147658.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 321389 322366 . - . ID=gene-VMS06_RS06115;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=VMS06_RS06115 NZ_JAVXZI010000003.1 Protein Homology CDS 321389 322366 . - 0 ID=cds-WP_063147659.1;Parent=gene-VMS06_RS06115;Dbxref=GenBank:WP_063147659.1;Name=WP_063147659.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459960.1;locus_tag=VMS06_RS06115;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_063147659.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 322363 324111 . - . ID=gene-VMS06_RS06120;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=VMS06_RS06120 NZ_JAVXZI010000003.1 Protein Homology CDS 322363 324111 . - 0 ID=cds-WP_023299725.1;Parent=gene-VMS06_RS06120;Dbxref=GenBank:WP_023299725.1;Name=WP_023299725.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309024.1;locus_tag=VMS06_RS06120;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_023299725.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 324148 326412 . - . ID=gene-VMS06_RS06125;Name=VMS06_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06125 NZ_JAVXZI010000003.1 Protein Homology CDS 324148 326412 . - 0 ID=cds-WP_063147660.1;Parent=gene-VMS06_RS06125;Dbxref=GenBank:WP_063147660.1;Name=WP_063147660.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384827.1;locus_tag=VMS06_RS06125;product=ComEC family protein;protein_id=WP_063147660.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 326625 326912 . - . ID=gene-VMS06_RS06130;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=VMS06_RS06130 NZ_JAVXZI010000003.1 Protein Homology CDS 326625 326912 . - 0 ID=cds-WP_003858233.1;Parent=gene-VMS06_RS06130;Dbxref=GenBank:WP_003858233.1;Name=WP_003858233.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858233.1;locus_tag=VMS06_RS06130;product=integration host factor subunit beta;protein_id=WP_003858233.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 327083 328756 . - . ID=gene-VMS06_RS06135;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=VMS06_RS06135 NZ_JAVXZI010000003.1 Protein Homology CDS 327083 328756 . - 0 ID=cds-WP_003858235.1;Parent=gene-VMS06_RS06135;Dbxref=GenBank:WP_003858235.1;Name=WP_003858235.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=VMS06_RS06135;product=30S ribosomal protein S1;protein_id=WP_003858235.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 328868 329551 . - . ID=gene-VMS06_RS06140;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=VMS06_RS06140 NZ_JAVXZI010000003.1 Protein Homology CDS 328868 329551 . - 0 ID=cds-WP_015570968.1;Parent=gene-VMS06_RS06140;Dbxref=GenBank:WP_015570968.1;Name=WP_015570968.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=VMS06_RS06140;product=(d)CMP kinase;protein_id=WP_015570968.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 329737 331020 . - . ID=gene-VMS06_RS06145;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=VMS06_RS06145 NZ_JAVXZI010000003.1 Protein Homology CDS 329737 331020 . - 0 ID=cds-WP_038415776.1;Parent=gene-VMS06_RS06145;Dbxref=GenBank:WP_038415776.1;Name=WP_038415776.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226116.1;locus_tag=VMS06_RS06145;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_038415776.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 331089 332177 . - . ID=gene-VMS06_RS06150;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=VMS06_RS06150 NZ_JAVXZI010000003.1 Protein Homology CDS 331089 332177 . - 0 ID=cds-WP_022647627.1;Parent=gene-VMS06_RS06150;Dbxref=GenBank:WP_022647627.1;Name=WP_022647627.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459952.1;locus_tag=VMS06_RS06150;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_022647627.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 332340 333032 . - . ID=gene-VMS06_RS06155;Name=VMS06_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06155 NZ_JAVXZI010000003.1 Protein Homology CDS 332340 333032 . - 0 ID=cds-WP_323630621.1;Parent=gene-VMS06_RS06155;Dbxref=GenBank:WP_323630621.1;Name=WP_323630621.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415426.1;locus_tag=VMS06_RS06155;product=DUF421 domain-containing protein;protein_id=WP_323630621.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 333160 334920 . + . ID=gene-VMS06_RS06160;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=VMS06_RS06160 NZ_JAVXZI010000003.1 Protein Homology CDS 333160 334920 . + 0 ID=cds-WP_022647625.1;Parent=gene-VMS06_RS06160;Dbxref=GenBank:WP_022647625.1;Name=WP_022647625.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226113.1;locus_tag=VMS06_RS06160;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_022647625.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 335326 336183 . + . ID=gene-VMS06_RS06165;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=VMS06_RS06165 NZ_JAVXZI010000003.1 Protein Homology CDS 335326 336183 . + 0 ID=cds-WP_017384832.1;Parent=gene-VMS06_RS06165;Dbxref=GenBank:WP_017384832.1;Name=WP_017384832.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226112.1;locus_tag=VMS06_RS06165;product=formate transporter FocA;protein_id=WP_017384832.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 336235 338517 . + . ID=gene-VMS06_RS06170;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=VMS06_RS06170 NZ_JAVXZI010000003.1 Protein Homology CDS 336235 338517 . + 0 ID=cds-WP_022647624.1;Parent=gene-VMS06_RS06170;Dbxref=GenBank:WP_022647624.1;Name=WP_022647624.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459948.1;locus_tag=VMS06_RS06170;product=formate C-acetyltransferase;protein_id=WP_022647624.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 338721 339461 . + . ID=gene-VMS06_RS06175;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=VMS06_RS06175 NZ_JAVXZI010000003.1 Protein Homology CDS 338721 339461 . + 0 ID=cds-WP_003858250.1;Parent=gene-VMS06_RS06175;Dbxref=GenBank:WP_003858250.1;Name=WP_003858250.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309012.1;locus_tag=VMS06_RS06175;product=pyruvate formate lyase 1-activating protein;protein_id=WP_003858250.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 339498 340019 . - . ID=gene-VMS06_RS06180;Name=VMS06_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06180 NZ_JAVXZI010000003.1 Protein Homology CDS 339498 340019 . - 0 ID=cds-WP_063147661.1;Parent=gene-VMS06_RS06180;Dbxref=GenBank:WP_063147661.1;Name=WP_063147661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693702.1;locus_tag=VMS06_RS06180;product=anti-virulence regulator CigR family protein;protein_id=WP_063147661.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 340143 341291 . - . ID=gene-VMS06_RS06185;Name=VMS06_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06185 NZ_JAVXZI010000003.1 Protein Homology CDS 340143 341291 . - 0 ID=cds-WP_022647622.1;Parent=gene-VMS06_RS06185;Dbxref=GenBank:WP_022647622.1;Name=WP_022647622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226109.1;locus_tag=VMS06_RS06185;product=MFS transporter;protein_id=WP_022647622.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq gene 341566 342429 . - . ID=gene-VMS06_RS06190;Name=VMS06_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06190 NZ_JAVXZI010000003.1 Protein Homology CDS 341566 342429 . - 0 ID=cds-WP_023299719.1;Parent=gene-VMS06_RS06190;Dbxref=GenBank:WP_023299719.1;Name=WP_023299719.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459942.1;locus_tag=VMS06_RS06190;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_023299719.1;transl_table=11 NZ_JAVXZI010000003.1 RefSeq pseudogene 342431 342511 . - . ID=gene-VMS06_RS06195;Name=VMS06_RS06195;end_range=342511,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS06195;partial=true;pseudo=true NZ_JAVXZI010000003.1 Protein Homology CDS 342431 342511 . - 0 ID=cds-VMS06_RS06195;Parent=gene-VMS06_RS06195;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=342511,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=VMS06_RS06195;partial=true;product=dimethyl sulfoxide reductase subunit B;pseudo=true;transl_table=11 ##sequence-region NZ_JAVXZI010000004.1 1 260366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000004.1 RefSeq region 1 260366 . + . ID=NZ_JAVXZI010000004.1:1..260366;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000004.1 RefSeq gene 193 741 . + . ID=gene-VMS06_RS06200;Name=VMS06_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06200 NZ_JAVXZI010000004.1 GeneMarkS-2+ CDS 193 741 . + 0 ID=cds-WP_323630623.1;Parent=gene-VMS06_RS06200;Dbxref=GenBank:WP_323630623.1;Name=WP_323630623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS06200;product=hypothetical protein;protein_id=WP_323630623.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 1037 2689 . - . ID=gene-VMS06_RS06205;Name=VMS06_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06205 NZ_JAVXZI010000004.1 Protein Homology CDS 1037 2689 . - 0 ID=cds-WP_074136375.1;Parent=gene-VMS06_RS06205;Dbxref=GenBank:WP_074136375.1;Name=WP_074136375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001298048.1;locus_tag=VMS06_RS06205;product=DUF262 domain-containing protein;protein_id=WP_074136375.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 3451 4320 . - . ID=gene-VMS06_RS06210;Name=VMS06_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06210 NZ_JAVXZI010000004.1 Protein Homology CDS 3451 4320 . - 0 ID=cds-WP_063148079.1;Parent=gene-VMS06_RS06210;Dbxref=GenBank:WP_063148079.1;Name=WP_063148079.1;Ontology_term=GO:0009307,GO:0015666;gbkey=CDS;go_function=restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882366.1;locus_tag=VMS06_RS06210;product=phosphorothioated DNA-binding restriction endonuclease;protein_id=WP_063148079.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 4622 5089 . + . ID=gene-VMS06_RS06215;Name=VMS06_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06215 NZ_JAVXZI010000004.1 Protein Homology CDS 4622 5089 . + 0 ID=cds-WP_074136376.1;Parent=gene-VMS06_RS06215;Dbxref=GenBank:WP_074136376.1;Name=WP_074136376.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830480.1;locus_tag=VMS06_RS06215;product=SymE family type I addiction module toxin;protein_id=WP_074136376.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 5253 5783 . + . ID=gene-VMS06_RS06220;Name=VMS06_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06220 NZ_JAVXZI010000004.1 Protein Homology CDS 5253 5783 . + 0 ID=cds-WP_063148080.1;Parent=gene-VMS06_RS06220;Dbxref=GenBank:WP_063148080.1;Name=WP_063148080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930687.1;locus_tag=VMS06_RS06220;product=DUF2778 domain-containing protein;protein_id=WP_063148080.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 5758 6021 . + . ID=gene-VMS06_RS06225;Name=VMS06_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06225 NZ_JAVXZI010000004.1 Protein Homology CDS 5758 6021 . + 0 ID=cds-WP_063148081.1;Parent=gene-VMS06_RS06225;Dbxref=GenBank:WP_063148081.1;Name=WP_063148081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371226.1;locus_tag=VMS06_RS06225;product=hypothetical protein;protein_id=WP_063148081.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 6097 7101 . - . ID=gene-VMS06_RS06230;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=VMS06_RS06230 NZ_JAVXZI010000004.1 Protein Homology CDS 6097 7101 . - 0 ID=cds-WP_063148082.1;Parent=gene-VMS06_RS06230;Dbxref=GenBank:WP_063148082.1;Name=WP_063148082.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006174180.1;locus_tag=VMS06_RS06230;product=tryptophan--tRNA ligase;protein_id=WP_063148082.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 7300 7725 . + . ID=gene-VMS06_RS06235;Name=fosA;gbkey=Gene;gene=fosA;gene_biotype=protein_coding;locus_tag=VMS06_RS06235 NZ_JAVXZI010000004.1 Protein Homology CDS 7300 7725 . + 0 ID=cds-WP_063148083.1;Parent=gene-VMS06_RS06235;Dbxref=GenBank:WP_063148083.1;Name=WP_063148083.1;gbkey=CDS;gene=fosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_025205684.1;locus_tag=VMS06_RS06235;product=FosA/FosA2 family fosfomycin resistance glutathione transferase;protein_id=WP_063148083.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 7711 8718 . - . ID=gene-VMS06_RS06240;Name=VMS06_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06240 NZ_JAVXZI010000004.1 Protein Homology CDS 7711 8718 . - 0 ID=cds-WP_063148084.1;Parent=gene-VMS06_RS06240;Dbxref=GenBank:WP_063148084.1;Name=WP_063148084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015584288.1;locus_tag=VMS06_RS06240;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_063148084.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 8904 9992 . + . ID=gene-VMS06_RS06245;Name=VMS06_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06245 NZ_JAVXZI010000004.1 Protein Homology CDS 8904 9992 . + 0 ID=cds-WP_048965576.1;Parent=gene-VMS06_RS06245;Dbxref=GenBank:WP_048965576.1;Name=WP_048965576.1;Ontology_term=GO:0000272,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885340.1;locus_tag=VMS06_RS06245;product=cellulase family glycosylhydrolase;protein_id=WP_048965576.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 10038 11432 . + . ID=gene-VMS06_RS06250;Name=VMS06_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06250 NZ_JAVXZI010000004.1 Protein Homology CDS 10038 11432 . + 0 ID=cds-WP_063148085.1;Parent=gene-VMS06_RS06250;Dbxref=GenBank:WP_063148085.1;Name=WP_063148085.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015584290.1;locus_tag=VMS06_RS06250;product=MFS transporter;protein_id=WP_063148085.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 11474 12721 . - . ID=gene-VMS06_RS06255;Name=VMS06_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06255 NZ_JAVXZI010000004.1 GeneMarkS-2+ CDS 11474 12721 . - 0 ID=cds-WP_063148086.1;Parent=gene-VMS06_RS06255;Dbxref=GenBank:WP_063148086.1;Name=WP_063148086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS06255;product=hypothetical protein;protein_id=WP_063148086.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 12847 13242 . - . ID=gene-VMS06_RS06260;Name=VMS06_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06260 NZ_JAVXZI010000004.1 Protein Homology CDS 12847 13242 . - 0 ID=cds-WP_063148087.1;Parent=gene-VMS06_RS06260;Dbxref=GenBank:WP_063148087.1;Name=WP_063148087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885338.1;locus_tag=VMS06_RS06260;product=VOC family protein;protein_id=WP_063148087.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 13325 14095 . + . ID=gene-VMS06_RS06265;Name=VMS06_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06265 NZ_JAVXZI010000004.1 Protein Homology CDS 13325 14095 . + 0 ID=cds-WP_063148088.1;Parent=gene-VMS06_RS06265;Dbxref=GenBank:WP_063148088.1;Name=WP_063148088.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885337.1;locus_tag=VMS06_RS06265;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_063148088.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 14159 14764 . + . ID=gene-VMS06_RS06270;Name=VMS06_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06270 NZ_JAVXZI010000004.1 Protein Homology CDS 14159 14764 . + 0 ID=cds-WP_022646928.1;Parent=gene-VMS06_RS06270;Dbxref=GenBank:WP_022646928.1;Name=WP_022646928.1;Ontology_term=GO:0006508,GO:0004176;gbkey=CDS;go_function=ATP-dependent peptidase activity|0004176||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501342.1;locus_tag=VMS06_RS06270;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_022646928.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 14899 16020 . + . ID=gene-VMS06_RS06275;Name=VMS06_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06275 NZ_JAVXZI010000004.1 Protein Homology CDS 14899 16020 . + 0 ID=cds-WP_045307858.1;Parent=gene-VMS06_RS06275;Dbxref=GenBank:WP_045307858.1;Name=WP_045307858.1;Ontology_term=GO:0043687,GO:0008198,GO:0016706;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224890.1;locus_tag=VMS06_RS06275;product=ribosomal protein uL16 3-hydroxylase;protein_id=WP_045307858.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 16059 16244 . - . ID=gene-VMS06_RS06280;Name=VMS06_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06280 NZ_JAVXZI010000004.1 Protein Homology CDS 16059 16244 . - 0 ID=cds-WP_010427252.1;Parent=gene-VMS06_RS06280;Dbxref=GenBank:WP_010427252.1;Name=WP_010427252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863066.1;locus_tag=VMS06_RS06280;product=hypothetical protein;protein_id=WP_010427252.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 16464 16697 . + . ID=gene-VMS06_RS06285;Name=VMS06_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06285 NZ_JAVXZI010000004.1 Protein Homology CDS 16464 16697 . + 0 ID=cds-WP_003863067.1;Parent=gene-VMS06_RS06285;Dbxref=GenBank:WP_003863067.1;Name=WP_003863067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863067.1;locus_tag=VMS06_RS06285;product=DUF2171 domain-containing protein;protein_id=WP_003863067.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 16836 17789 . + . ID=gene-VMS06_RS06290;Name=VMS06_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06290 NZ_JAVXZI010000004.1 Protein Homology CDS 16836 17789 . + 0 ID=cds-WP_063148089.1;Parent=gene-VMS06_RS06290;Dbxref=GenBank:WP_063148089.1;Name=WP_063148089.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006174161.1;locus_tag=VMS06_RS06290;product=helix-turn-helix domain-containing protein;protein_id=WP_063148089.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 17911 20019 . + . ID=gene-VMS06_RS06295;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=VMS06_RS06295 NZ_JAVXZI010000004.1 Protein Homology CDS 17911 20019 . + 0 ID=cds-WP_323630632.1;Parent=gene-VMS06_RS06295;Dbxref=GenBank:WP_323630632.1;Name=WP_323630632.1;Ontology_term=GO:0015344,GO:0038023;gbkey=CDS;gene=foxA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459359.1;locus_tag=VMS06_RS06295;product=ferrioxamine B receptor FoxA;protein_id=WP_323630632.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 20122 21537 . - . ID=gene-VMS06_RS06300;Name=VMS06_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06300 NZ_JAVXZI010000004.1 Protein Homology CDS 20122 21537 . - 0 ID=cds-WP_063148095.1;Parent=gene-VMS06_RS06300;Dbxref=GenBank:WP_063148095.1;Name=WP_063148095.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863072.1;locus_tag=VMS06_RS06300;product=aminotransferase-like domain-containing protein;protein_id=WP_063148095.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 21714 21875 . + . ID=gene-VMS06_RS06305;Name=VMS06_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06305 NZ_JAVXZI010000004.1 Protein Homology CDS 21714 21875 . + 0 ID=cds-WP_003863073.1;Parent=gene-VMS06_RS06305;Dbxref=GenBank:WP_003863073.1;Name=WP_003863073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572572.1;locus_tag=VMS06_RS06305;product=DUF1127 domain-containing protein;protein_id=WP_003863073.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 21961 23349 . - . ID=gene-VMS06_RS06310;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=VMS06_RS06310 NZ_JAVXZI010000004.1 Protein Homology CDS 21961 23349 . - 0 ID=cds-WP_063148090.1;Parent=gene-VMS06_RS06310;Dbxref=GenBank:WP_063148090.1;Name=WP_063148090.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095423.1;locus_tag=VMS06_RS06310;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_063148090.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 23451 23930 . + . ID=gene-VMS06_RS06315;Name=VMS06_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06315 NZ_JAVXZI010000004.1 Protein Homology CDS 23451 23930 . + 0 ID=cds-WP_045621753.1;Parent=gene-VMS06_RS06315;Dbxref=GenBank:WP_045621753.1;Name=WP_045621753.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427243.1;locus_tag=VMS06_RS06315;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_045621753.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 24174 24497 . + . ID=gene-VMS06_RS06320;Name=VMS06_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06320 NZ_JAVXZI010000004.1 Protein Homology CDS 24174 24497 . + 0 ID=cds-WP_038415232.1;Parent=gene-VMS06_RS06320;Dbxref=GenBank:WP_038415232.1;Name=WP_038415232.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014068727.1;locus_tag=VMS06_RS06320;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_038415232.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 24490 24885 . + . ID=gene-VMS06_RS06325;Name=VMS06_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06325 NZ_JAVXZI010000004.1 Protein Homology CDS 24490 24885 . + 0 ID=cds-WP_022646936.1;Parent=gene-VMS06_RS06325;Dbxref=GenBank:WP_022646936.1;Name=WP_022646936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427232.1;locus_tag=VMS06_RS06325;product=amino acid-binding ACT protein;protein_id=WP_022646936.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 24860 25555 . + . ID=gene-VMS06_RS06330;Name=VMS06_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06330 NZ_JAVXZI010000004.1 Protein Homology CDS 24860 25555 . + 0 ID=cds-WP_063148091.1;Parent=gene-VMS06_RS06330;Dbxref=GenBank:WP_063148091.1;Name=WP_063148091.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095431.1;locus_tag=VMS06_RS06330;product=ArsR/SmtB family transcription factor;protein_id=WP_063148091.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 26142 26612 . + . ID=gene-VMS06_RS06335;Name=VMS06_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06335 NZ_JAVXZI010000004.1 Protein Homology CDS 26142 26612 . + 0 ID=cds-WP_022646938.1;Parent=gene-VMS06_RS06335;Dbxref=GenBank:WP_022646938.1;Name=WP_022646938.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882398.1;locus_tag=VMS06_RS06335;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_022646938.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 26609 27676 . + . ID=gene-VMS06_RS06340;Name=VMS06_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06340 NZ_JAVXZI010000004.1 Protein Homology CDS 26609 27676 . + 0 ID=cds-WP_088581776.1;Parent=gene-VMS06_RS06340;Dbxref=GenBank:WP_088581776.1;Name=WP_088581776.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224907.1;locus_tag=VMS06_RS06340;product=HlyD family secretion protein;protein_id=WP_088581776.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 27666 28742 . + . ID=gene-VMS06_RS06345;Name=VMS06_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06345 NZ_JAVXZI010000004.1 Protein Homology CDS 27666 28742 . + 0 ID=cds-WP_022646940.1;Parent=gene-VMS06_RS06345;Dbxref=GenBank:WP_022646940.1;Name=WP_022646940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383864.1;locus_tag=VMS06_RS06345;product=DUF2955 domain-containing protein;protein_id=WP_022646940.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 28739 30010 . - . ID=gene-VMS06_RS06350;Name=VMS06_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06350 NZ_JAVXZI010000004.1 Protein Homology CDS 28739 30010 . - 0 ID=cds-WP_022646941.1;Parent=gene-VMS06_RS06350;Dbxref=GenBank:WP_022646941.1;Name=WP_022646941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694571.1;locus_tag=VMS06_RS06350;product=DUF445 domain-containing protein;protein_id=WP_022646941.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 30014 30667 . - . ID=gene-VMS06_RS06355;Name=VMS06_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06355 NZ_JAVXZI010000004.1 Protein Homology CDS 30014 30667 . - 0 ID=cds-WP_058645753.1;Parent=gene-VMS06_RS06355;Dbxref=GenBank:WP_058645753.1;Name=WP_058645753.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383862.1;locus_tag=VMS06_RS06355;product=LysE family translocator;protein_id=WP_058645753.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 30716 31459 . - . ID=gene-VMS06_RS06360;Name=VMS06_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06360 NZ_JAVXZI010000004.1 Protein Homology CDS 30716 31459 . - 0 ID=cds-WP_063148272.1;Parent=gene-VMS06_RS06360;Dbxref=GenBank:WP_063148272.1;Name=WP_063148272.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830525.1;locus_tag=VMS06_RS06360;product=helix-turn-helix domain-containing protein;protein_id=WP_063148272.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 31610 32980 . + . ID=gene-VMS06_RS06365;Name=VMS06_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06365 NZ_JAVXZI010000004.1 Protein Homology CDS 31610 32980 . + 0 ID=cds-WP_063148271.1;Parent=gene-VMS06_RS06365;Dbxref=GenBank:WP_063148271.1;Name=WP_063148271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224918.1;locus_tag=VMS06_RS06365;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_063148271.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 33161 33706 . - . ID=gene-VMS06_RS06370;Name=VMS06_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06370 NZ_JAVXZI010000004.1 Protein Homology CDS 33161 33706 . - 0 ID=cds-WP_023299248.1;Parent=gene-VMS06_RS06370;Dbxref=GenBank:WP_023299248.1;Name=WP_023299248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224919.1;locus_tag=VMS06_RS06370;product=YfaZ family outer membrane protein;protein_id=WP_023299248.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 34116 35474 . + . ID=gene-VMS06_RS06375;Name=VMS06_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06375 NZ_JAVXZI010000004.1 Protein Homology CDS 34116 35474 . + 0 ID=cds-WP_063148270.1;Parent=gene-VMS06_RS06375;Dbxref=GenBank:WP_063148270.1;Name=WP_063148270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000823236.1;locus_tag=VMS06_RS06375;product=esterase-like activity of phytase family protein;protein_id=WP_063148270.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 35559 37406 . - . ID=gene-VMS06_RS06380;Name=VMS06_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06380 NZ_JAVXZI010000004.1 Protein Homology CDS 35559 37406 . - 0 ID=cds-WP_063148269.1;Parent=gene-VMS06_RS06380;Dbxref=GenBank:WP_063148269.1;Name=WP_063148269.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155615.1;locus_tag=VMS06_RS06380;product=3'-5' exonuclease;protein_id=WP_063148269.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 37593 38546 . - . ID=gene-VMS06_RS06385;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=VMS06_RS06385 NZ_JAVXZI010000004.1 Protein Homology CDS 37593 38546 . - 0 ID=cds-WP_038415244.1;Parent=gene-VMS06_RS06385;Dbxref=GenBank:WP_038415244.1;Name=WP_038415244.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463389.1;locus_tag=VMS06_RS06385;product=GTPase;protein_id=WP_038415244.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 38557 38760 . - . ID=gene-VMS06_RS06390;Name=VMS06_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06390 NZ_JAVXZI010000004.1 Protein Homology CDS 38557 38760 . - 0 ID=cds-WP_003856610.1;Parent=gene-VMS06_RS06390;Dbxref=GenBank:WP_003856610.1;Name=WP_003856610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=VMS06_RS06390;product=YbdD/YjiX family protein;protein_id=WP_003856610.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 38857 41010 . - . ID=gene-VMS06_RS06395;Name=btsT;gbkey=Gene;gene=btsT;gene_biotype=protein_coding;locus_tag=VMS06_RS06395 NZ_JAVXZI010000004.1 Protein Homology CDS 38857 41010 . - 0 ID=cds-WP_063148268.1;Parent=gene-VMS06_RS06395;Dbxref=GenBank:WP_063148268.1;Name=WP_063148268.1;gbkey=CDS;gene=btsT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313340.2;locus_tag=VMS06_RS06395;product=pyruvate/proton symporter BtsT;protein_id=WP_063148268.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 41230 41487 . - . ID=gene-VMS06_RS06400;Name=VMS06_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06400 NZ_JAVXZI010000004.1 Protein Homology CDS 41230 41487 . - 0 ID=cds-WP_022646951.1;Parent=gene-VMS06_RS06400;Dbxref=GenBank:WP_022646951.1;Name=WP_022646951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694564.1;locus_tag=VMS06_RS06400;product=HTH domain-containing protein;protein_id=WP_022646951.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 41608 42117 . - . ID=gene-VMS06_RS06405;Name=VMS06_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06405 NZ_JAVXZI010000004.1 Protein Homology CDS 41608 42117 . - 0 ID=cds-WP_003856606.1;Parent=gene-VMS06_RS06405;Dbxref=GenBank:WP_003856606.1;Name=WP_003856606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572588.1;locus_tag=VMS06_RS06405;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_003856606.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 42135 43697 . - . ID=gene-VMS06_RS06410;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=VMS06_RS06410 NZ_JAVXZI010000004.1 Protein Homology CDS 42135 43697 . - 0 ID=cds-WP_045621221.1;Parent=gene-VMS06_RS06410;Dbxref=GenBank:WP_045621221.1;Name=WP_045621221.1;Ontology_term=GO:0010124,GO:0016712,GO:0050660;gbkey=CDS;gene=hpaB;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C reduced flavin or flavoprotein as one donor%2C and incorporation of one atom of oxygen|0016712||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=VMS06_RS06410;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_045621221.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 43893 44783 . - . ID=gene-VMS06_RS06415;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=VMS06_RS06415 NZ_JAVXZI010000004.1 Protein Homology CDS 43893 44783 . - 0 ID=cds-WP_063148267.1;Parent=gene-VMS06_RS06415;Dbxref=GenBank:WP_063148267.1;Name=WP_063148267.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224927.1;locus_tag=VMS06_RS06415;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_063148267.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 44755 46101 . - . ID=gene-VMS06_RS06420;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=VMS06_RS06420 NZ_JAVXZI010000004.1 Protein Homology CDS 44755 46101 . - 0 ID=cds-WP_032625355.1;Parent=gene-VMS06_RS06420;Dbxref=GenBank:WP_032625355.1;Name=WP_032625355.1;Ontology_term=GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572591.1;locus_tag=VMS06_RS06420;product=4-hydroxyphenylacetate permease;protein_id=WP_032625355.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 46123 46920 . - . ID=gene-VMS06_RS06425;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=VMS06_RS06425 NZ_JAVXZI010000004.1 Protein Homology CDS 46123 46920 . - 0 ID=cds-WP_063148266.1;Parent=gene-VMS06_RS06425;Dbxref=GenBank:WP_063148266.1;Name=WP_063148266.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224929.1;locus_tag=VMS06_RS06425;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_063148266.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 46931 47734 . - . ID=gene-VMS06_RS06430;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=VMS06_RS06430 NZ_JAVXZI010000004.1 Protein Homology CDS 46931 47734 . - 0 ID=cds-WP_063148265.1;Parent=gene-VMS06_RS06430;Dbxref=GenBank:WP_063148265.1;Name=WP_063148265.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710089.2;locus_tag=VMS06_RS06430;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_063148265.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 47834 48214 . - . ID=gene-VMS06_RS06435;Name=VMS06_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06435 NZ_JAVXZI010000004.1 Protein Homology CDS 47834 48214 . - 0 ID=cds-WP_063148264.1;Parent=gene-VMS06_RS06435;Dbxref=GenBank:WP_063148264.1;Name=WP_063148264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460077.1;locus_tag=VMS06_RS06435;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_063148264.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 48224 49075 . - . ID=gene-VMS06_RS06440;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=VMS06_RS06440 NZ_JAVXZI010000004.1 Protein Homology CDS 48224 49075 . - 0 ID=cds-WP_063148263.1;Parent=gene-VMS06_RS06440;Dbxref=GenBank:WP_063148263.1;Name=WP_063148263.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460076.1;locus_tag=VMS06_RS06440;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_063148263.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 49078 50544 . - . ID=gene-VMS06_RS06445;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=VMS06_RS06445 NZ_JAVXZI010000004.1 Protein Homology CDS 49078 50544 . - 0 ID=cds-WP_022646959.1;Parent=gene-VMS06_RS06445;Dbxref=GenBank:WP_022646959.1;Name=WP_022646959.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460075.1;locus_tag=VMS06_RS06445;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_022646959.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 50541 51818 . - . ID=gene-VMS06_RS06450;Name=hpaG;gbkey=Gene;gene=hpaG;gene_biotype=protein_coding;locus_tag=VMS06_RS06450 NZ_JAVXZI010000004.1 Protein Homology CDS 50541 51818 . - 0 ID=cds-WP_063148262.1;Parent=gene-VMS06_RS06450;Dbxref=GenBank:WP_063148262.1;Name=WP_063148262.1;Ontology_term=GO:1901023,GO:0008704,GO:0018800;gbkey=CDS;gene=hpaG;go_function=5-carboxymethyl-2-hydroxymuconate delta-isomerase activity|0008704||IEA,5-oxopent-3-ene-1%2C2%2C5-tricarboxylate decarboxylase activity|0018800||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710093.2;locus_tag=VMS06_RS06450;product=4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase;protein_id=WP_063148262.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 52087 52527 . + . ID=gene-VMS06_RS06455;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=VMS06_RS06455 NZ_JAVXZI010000004.1 Protein Homology CDS 52087 52527 . + 0 ID=cds-WP_006810239.1;Parent=gene-VMS06_RS06455;Dbxref=GenBank:WP_006810239.1;Name=WP_006810239.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856591.1;locus_tag=VMS06_RS06455;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_006810239.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 52611 54275 . + . ID=gene-VMS06_RS06460;Name=tsr;gbkey=Gene;gene=tsr;gene_biotype=protein_coding;locus_tag=VMS06_RS06460 NZ_JAVXZI010000004.1 Protein Homology CDS 52611 54275 . + 0 ID=cds-WP_063148261.1;Parent=gene-VMS06_RS06460;Dbxref=GenBank:WP_063148261.1;Name=WP_063148261.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tsr;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463392.1;locus_tag=VMS06_RS06460;product=methyl-accepting chemotaxis protein;protein_id=WP_063148261.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 54457 54966 . - . ID=gene-VMS06_RS06465;Name=VMS06_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06465 NZ_JAVXZI010000004.1 Protein Homology CDS 54457 54966 . - 0 ID=cds-WP_063148260.1;Parent=gene-VMS06_RS06465;Dbxref=GenBank:WP_063148260.1;Name=WP_063148260.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856587.1;locus_tag=VMS06_RS06465;product=GNAT family N-acetyltransferase;protein_id=WP_063148260.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 54966 57257 . - . ID=gene-VMS06_RS06470;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=VMS06_RS06470 NZ_JAVXZI010000004.1 Protein Homology CDS 54966 57257 . - 0 ID=cds-WP_063148259.1;Parent=gene-VMS06_RS06470;Dbxref=GenBank:WP_063148259.1;Name=WP_063148259.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224963.1;locus_tag=VMS06_RS06470;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_063148259.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 57529 58011 . - . ID=gene-VMS06_RS06475;Name=VMS06_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06475 NZ_JAVXZI010000004.1 Protein Homology CDS 57529 58011 . - 0 ID=cds-WP_032625373.1;Parent=gene-VMS06_RS06475;Dbxref=GenBank:WP_032625373.1;Name=WP_032625373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882431.1;locus_tag=VMS06_RS06475;product=YjjA family protein;protein_id=WP_032625373.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 58096 58833 . - . ID=gene-VMS06_RS06480;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=VMS06_RS06480 NZ_JAVXZI010000004.1 Protein Homology CDS 58096 58833 . - 0 ID=cds-WP_003856580.1;Parent=gene-VMS06_RS06480;Dbxref=GenBank:WP_003856580.1;Name=WP_003856580.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463402.1;locus_tag=VMS06_RS06480;product=replicative helicase loader DnaC;protein_id=WP_003856580.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 58830 59375 . - . ID=gene-VMS06_RS06485;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=VMS06_RS06485 NZ_JAVXZI010000004.1 Protein Homology CDS 58830 59375 . - 0 ID=cds-WP_023299265.1;Parent=gene-VMS06_RS06485;Dbxref=GenBank:WP_023299265.1;Name=WP_023299265.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856579.1;locus_tag=VMS06_RS06485;product=primosomal protein DnaT;protein_id=WP_023299265.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 59500 59928 . - . ID=gene-VMS06_RS06490;Name=VMS06_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06490 NZ_JAVXZI010000004.1 Protein Homology CDS 59500 59928 . - 0 ID=cds-WP_063148258.1;Parent=gene-VMS06_RS06490;Dbxref=GenBank:WP_063148258.1;Name=WP_063148258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386492.1;locus_tag=VMS06_RS06490;product=organic hydroperoxide resistance protein;protein_id=WP_063148258.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 60013 60465 . - . ID=gene-VMS06_RS06495;Name=VMS06_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06495 NZ_JAVXZI010000004.1 Protein Homology CDS 60013 60465 . - 0 ID=cds-WP_022646966.1;Parent=gene-VMS06_RS06495;Dbxref=GenBank:WP_022646966.1;Name=WP_022646966.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572604.1;locus_tag=VMS06_RS06495;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_022646966.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 60510 60983 . - . ID=gene-VMS06_RS06500;Name=VMS06_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06500 NZ_JAVXZI010000004.1 Protein Homology CDS 60510 60983 . - 0 ID=cds-WP_032621429.1;Parent=gene-VMS06_RS06500;Dbxref=GenBank:WP_032621429.1;Name=WP_032621429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463404.1;locus_tag=VMS06_RS06500;product=threonine/serine exporter;protein_id=WP_032621429.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 60974 61750 . - . ID=gene-VMS06_RS06505;Name=VMS06_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06505 NZ_JAVXZI010000004.1 Protein Homology CDS 60974 61750 . - 0 ID=cds-WP_032625377.1;Parent=gene-VMS06_RS06505;Dbxref=GenBank:WP_032625377.1;Name=WP_032625377.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224968.1;locus_tag=VMS06_RS06505;product=threonine/serine exporter family protein;protein_id=WP_032625377.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 62140 62877 . + . ID=gene-VMS06_RS06510;Name=VMS06_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06510 NZ_JAVXZI010000004.1 Protein Homology CDS 62140 62877 . + 0 ID=cds-WP_022646969.1;Parent=gene-VMS06_RS06510;Dbxref=GenBank:WP_022646969.1;Name=WP_022646969.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383841.1;locus_tag=VMS06_RS06510;product=helix-turn-helix transcriptional regulator;protein_id=WP_022646969.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 62874 63509 . + . ID=gene-VMS06_RS06515;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=VMS06_RS06515 NZ_JAVXZI010000004.1 Protein Homology CDS 62874 63509 . + 0 ID=cds-WP_032625381.1;Parent=gene-VMS06_RS06515;Dbxref=GenBank:WP_032625381.1;Name=WP_032625381.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856573.1;locus_tag=VMS06_RS06515;product=DNA-binding transcriptional activator BglJ;protein_id=WP_032625381.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 63547 64005 . - . ID=gene-VMS06_RS06520;Name=VMS06_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06520 NZ_JAVXZI010000004.1 Protein Homology CDS 63547 64005 . - 0 ID=cds-WP_063148257.1;Parent=gene-VMS06_RS06520;Dbxref=GenBank:WP_063148257.1;Name=WP_063148257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224974.1;locus_tag=VMS06_RS06520;product=YbaK/EbsC family protein;protein_id=WP_063148257.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 64334 65680 . + . ID=gene-VMS06_RS06525;Name=VMS06_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06525 NZ_JAVXZI010000004.1 Protein Homology CDS 64334 65680 . + 0 ID=cds-WP_006810218.1;Parent=gene-VMS06_RS06525;Dbxref=GenBank:WP_006810218.1;Name=WP_006810218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224975.1;locus_tag=VMS06_RS06525;product=PTS cellobiose transporter subunit IIC;protein_id=WP_006810218.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 65758 66546 . - . ID=gene-VMS06_RS06530;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=VMS06_RS06530 NZ_JAVXZI010000004.1 Protein Homology CDS 65758 66546 . - 0 ID=cds-WP_323630626.1;Parent=gene-VMS06_RS06530;Dbxref=GenBank:WP_323630626.1;Name=WP_323630626.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003829996.1;locus_tag=VMS06_RS06530;product=siderophore-iron reductase FhuF;protein_id=WP_323630626.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 66642 67706 . - . ID=gene-VMS06_RS06535;Name=VMS06_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06535 NZ_JAVXZI010000004.1 Protein Homology CDS 66642 67706 . - 0 ID=cds-WP_063148256.1;Parent=gene-VMS06_RS06535;Dbxref=GenBank:WP_063148256.1;Name=WP_063148256.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694554.1;locus_tag=VMS06_RS06535;product=GGDEF domain-containing protein;protein_id=WP_063148256.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 67923 68192 . + . ID=gene-VMS06_RS06540;Name=VMS06_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06540 NZ_JAVXZI010000004.1 Protein Homology CDS 67923 68192 . + 0 ID=cds-WP_006810214.1;Parent=gene-VMS06_RS06540;Dbxref=GenBank:WP_006810214.1;Name=WP_006810214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810214.1;locus_tag=VMS06_RS06540;product=DUF1435 domain-containing protein;protein_id=WP_006810214.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 68235 68321 . - . ID=gene-VMS06_RS06545;Name=VMS06_RS06545;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS06545 NZ_JAVXZI010000004.1 tRNAscan-SE tRNA 68235 68321 . - . ID=rna-VMS06_RS06545;Parent=gene-VMS06_RS06545;anticodon=(pos:complement(68285..68287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS06545;product=tRNA-Leu NZ_JAVXZI010000004.1 tRNAscan-SE exon 68235 68321 . - . ID=exon-VMS06_RS06545-1;Parent=rna-VMS06_RS06545;anticodon=(pos:complement(68285..68287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS06545;product=tRNA-Leu NZ_JAVXZI010000004.1 RefSeq gene 68354 68439 . - . ID=gene-VMS06_RS06550;Name=VMS06_RS06550;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS06550 NZ_JAVXZI010000004.1 tRNAscan-SE tRNA 68354 68439 . - . ID=rna-VMS06_RS06550;Parent=gene-VMS06_RS06550;anticodon=(pos:complement(68403..68405));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS06550;product=tRNA-Leu NZ_JAVXZI010000004.1 tRNAscan-SE exon 68354 68439 . - . ID=exon-VMS06_RS06550-1;Parent=rna-VMS06_RS06550;anticodon=(pos:complement(68403..68405));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS06550;product=tRNA-Leu NZ_JAVXZI010000004.1 RefSeq gene 68468 68554 . - . ID=gene-VMS06_RS06555;Name=VMS06_RS06555;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS06555 NZ_JAVXZI010000004.1 tRNAscan-SE tRNA 68468 68554 . - . ID=rna-VMS06_RS06555;Parent=gene-VMS06_RS06555;anticodon=(pos:complement(68518..68520));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS06555;product=tRNA-Leu NZ_JAVXZI010000004.1 tRNAscan-SE exon 68468 68554 . - . ID=exon-VMS06_RS06555-1;Parent=rna-VMS06_RS06555;anticodon=(pos:complement(68518..68520));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS06555;product=tRNA-Leu NZ_JAVXZI010000004.1 RefSeq gene 68699 69727 . - . ID=gene-VMS06_RS06560;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=VMS06_RS06560 NZ_JAVXZI010000004.1 Protein Homology CDS 68699 69727 . - 0 ID=cds-WP_032625390.1;Parent=gene-VMS06_RS06560;Dbxref=GenBank:WP_032625390.1;Name=WP_032625390.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463412.1;locus_tag=VMS06_RS06560;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_032625390.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 69830 70243 . + . ID=gene-VMS06_RS06565;Name=VMS06_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06565 NZ_JAVXZI010000004.1 Protein Homology CDS 69830 70243 . + 0 ID=cds-WP_048965864.1;Parent=gene-VMS06_RS06565;Dbxref=GenBank:WP_048965864.1;Name=WP_048965864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383837.1;locus_tag=VMS06_RS06565;product=DNA polymerase III subunit psi;protein_id=WP_048965864.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 70212 70655 . + . ID=gene-VMS06_RS06570;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=VMS06_RS06570 NZ_JAVXZI010000004.1 Protein Homology CDS 70212 70655 . + 0 ID=cds-WP_032625392.1;Parent=gene-VMS06_RS06570;Dbxref=GenBank:WP_032625392.1;Name=WP_032625392.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856565.1;locus_tag=VMS06_RS06570;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_032625392.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 70675 71352 . + . ID=gene-VMS06_RS06575;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=VMS06_RS06575 NZ_JAVXZI010000004.1 Protein Homology CDS 70675 71352 . + 0 ID=cds-WP_022646980.1;Parent=gene-VMS06_RS06575;Dbxref=GenBank:WP_022646980.1;Name=WP_022646980.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095482.1;locus_tag=VMS06_RS06575;product=pyrimidine 5'-nucleotidase;protein_id=WP_022646980.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 71445 73034 . + . ID=gene-VMS06_RS06580;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=VMS06_RS06580 NZ_JAVXZI010000004.1 Protein Homology CDS 71445 73034 . + 0 ID=cds-WP_046619833.1;Parent=gene-VMS06_RS06580;Dbxref=GenBank:WP_046619833.1;Name=WP_046619833.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=VMS06_RS06580;product=peptide chain release factor 3;protein_id=WP_046619833.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 73339 73956 . + . ID=gene-VMS06_RS06585;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=VMS06_RS06585 NZ_JAVXZI010000004.1 Protein Homology CDS 73339 73956 . + 0 ID=cds-WP_022646982.1;Parent=gene-VMS06_RS06585;Dbxref=GenBank:WP_022646982.1;Name=WP_022646982.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463417.1;locus_tag=VMS06_RS06585;product=molecular chaperone OsmY;protein_id=WP_022646982.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 74082 74243 . + . ID=gene-VMS06_RS06590;Name=VMS06_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06590 NZ_JAVXZI010000004.1 Protein Homology CDS 74082 74243 . + 0 ID=cds-WP_003856556.1;Parent=gene-VMS06_RS06590;Dbxref=GenBank:WP_003856556.1;Name=WP_003856556.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=VMS06_RS06590;product=DUF1328 domain-containing protein;protein_id=WP_003856556.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 74366 75418 . + . ID=gene-VMS06_RS06595;Name=VMS06_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06595 NZ_JAVXZI010000004.1 Protein Homology CDS 74366 75418 . + 0 ID=cds-WP_023299272.1;Parent=gene-VMS06_RS06595;Dbxref=GenBank:WP_023299272.1;Name=WP_023299272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463419.1;locus_tag=VMS06_RS06595;product=patatin-like phospholipase family protein;protein_id=WP_023299272.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 75415 76197 . + . ID=gene-VMS06_RS06600;Name=VMS06_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06600 NZ_JAVXZI010000004.1 Protein Homology CDS 75415 76197 . + 0 ID=cds-WP_063146394.1;Parent=gene-VMS06_RS06600;Dbxref=GenBank:WP_063146394.1;Name=WP_063146394.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006174058.1;locus_tag=VMS06_RS06600;product=TatD family hydrolase;protein_id=WP_063146394.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 76192 77052 . - . ID=gene-VMS06_RS06605;Name=VMS06_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06605 NZ_JAVXZI010000004.1 Protein Homology CDS 76192 77052 . - 0 ID=cds-WP_046619840.1;Parent=gene-VMS06_RS06605;Dbxref=GenBank:WP_046619840.1;Name=WP_046619840.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502072.1;locus_tag=VMS06_RS06605;product=YjjW family glycine radical enzyme activase;protein_id=WP_046619840.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 77027 78562 . - . ID=gene-VMS06_RS06610;Name=VMS06_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06610 NZ_JAVXZI010000004.1 Protein Homology CDS 77027 78562 . - 0 ID=cds-WP_063843837.1;Parent=gene-VMS06_RS06610;Dbxref=GenBank:WP_063843837.1;Name=WP_063843837.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856545.1;locus_tag=VMS06_RS06610;product=YjjI family glycine radical enzyme;protein_id=WP_063843837.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 78826 79605 . + . ID=gene-VMS06_RS06615;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=VMS06_RS06615 NZ_JAVXZI010000004.1 Protein Homology CDS 78826 79605 . + 0 ID=cds-WP_003856543.1;Parent=gene-VMS06_RS06615;Dbxref=GenBank:WP_003856543.1;Name=WP_003856543.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=VMS06_RS06615;product=deoxyribose-phosphate aldolase;protein_id=WP_003856543.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 79706 81028 . + . ID=gene-VMS06_RS06620;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=VMS06_RS06620 NZ_JAVXZI010000004.1 Protein Homology CDS 79706 81028 . + 0 ID=cds-WP_023299277.1;Parent=gene-VMS06_RS06620;Dbxref=GenBank:WP_023299277.1;Name=WP_023299277.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123902.1;locus_tag=VMS06_RS06620;product=thymidine phosphorylase;protein_id=WP_023299277.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 81082 82305 . + . ID=gene-VMS06_RS06625;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=VMS06_RS06625 NZ_JAVXZI010000004.1 Protein Homology CDS 81082 82305 . + 0 ID=cds-WP_063148254.1;Parent=gene-VMS06_RS06625;Dbxref=GenBank:WP_063148254.1;Name=WP_063148254.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224992.1;locus_tag=VMS06_RS06625;product=phosphopentomutase;protein_id=WP_063148254.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 82431 83150 . + . ID=gene-VMS06_RS06630;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=VMS06_RS06630 NZ_JAVXZI010000004.1 Protein Homology CDS 82431 83150 . + 0 ID=cds-WP_003856538.1;Parent=gene-VMS06_RS06630;Dbxref=GenBank:WP_003856538.1;Name=WP_003856538.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463426.1;locus_tag=VMS06_RS06630;product=purine-nucleoside phosphorylase;protein_id=WP_003856538.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 83236 84252 . - . ID=gene-VMS06_RS06635;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=VMS06_RS06635 NZ_JAVXZI010000004.1 Protein Homology CDS 83236 84252 . - 0 ID=cds-WP_022646990.1;Parent=gene-VMS06_RS06635;Dbxref=GenBank:WP_022646990.1;Name=WP_022646990.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418803.1;locus_tag=VMS06_RS06635;product=lipoate--protein ligase;protein_id=WP_022646990.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 84292 84936 . - . ID=gene-VMS06_RS06640;Name=VMS06_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06640 NZ_JAVXZI010000004.1 Protein Homology CDS 84292 84936 . - 0 ID=cds-WP_015572615.1;Parent=gene-VMS06_RS06640;Dbxref=GenBank:WP_015572615.1;Name=WP_015572615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418804.1;locus_tag=VMS06_RS06640;product=YtjB family periplasmic protein;protein_id=WP_015572615.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 85054 86022 . + . ID=gene-VMS06_RS06645;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=VMS06_RS06645 NZ_JAVXZI010000004.1 Protein Homology CDS 85054 86022 . + 0 ID=cds-WP_003856524.1;Parent=gene-VMS06_RS06645;Dbxref=GenBank:WP_003856524.1;Name=WP_003856524.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313373.1;locus_tag=VMS06_RS06645;product=phosphoserine phosphatase;protein_id=WP_003856524.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 86098 87483 . + . ID=gene-VMS06_RS06650;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=VMS06_RS06650 NZ_JAVXZI010000004.1 Protein Homology CDS 86098 87483 . + 0 ID=cds-WP_003856523.1;Parent=gene-VMS06_RS06650;Dbxref=GenBank:WP_003856523.1;Name=WP_003856523.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=VMS06_RS06650;product=DNA repair protein RadA;protein_id=WP_003856523.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 87519 88751 . + . ID=gene-VMS06_RS06655;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=VMS06_RS06655 NZ_JAVXZI010000004.1 Protein Homology CDS 87519 88751 . + 0 ID=cds-WP_063148253.1;Parent=gene-VMS06_RS06655;Dbxref=GenBank:WP_063148253.1;Name=WP_063148253.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463436.5;locus_tag=VMS06_RS06655;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_063148253.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 88863 89864 . - . ID=gene-VMS06_RS06660;Name=VMS06_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06660 NZ_JAVXZI010000004.1 Protein Homology CDS 88863 89864 . - 0 ID=cds-WP_045308048.1;Parent=gene-VMS06_RS06660;Dbxref=GenBank:WP_045308048.1;Name=WP_045308048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810193.1;locus_tag=VMS06_RS06660;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_045308048.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 89972 90871 . + . ID=gene-VMS06_RS06665;Name=VMS06_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06665 NZ_JAVXZI010000004.1 Protein Homology CDS 89972 90871 . + 0 ID=cds-WP_022646992.1;Parent=gene-VMS06_RS06665;Dbxref=GenBank:WP_022646992.1;Name=WP_022646992.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502062.1;locus_tag=VMS06_RS06665;product=LysR family transcriptional regulator;protein_id=WP_022646992.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 90998 92665 . - . ID=gene-VMS06_RS06670;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=VMS06_RS06670 NZ_JAVXZI010000004.1 Protein Homology CDS 90998 92665 . - 0 ID=cds-WP_014882470.1;Parent=gene-VMS06_RS06670;Dbxref=GenBank:WP_014882470.1;Name=WP_014882470.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=VMS06_RS06670;product=energy-dependent translational throttle protein EttA;protein_id=WP_014882470.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 92892 94829 . + . ID=gene-VMS06_RS06675;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=VMS06_RS06675 NZ_JAVXZI010000004.1 Protein Homology CDS 92892 94829 . + 0 ID=cds-WP_063843839.1;Parent=gene-VMS06_RS06675;Dbxref=GenBank:WP_063843839.1;Name=WP_063843839.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418809.4;locus_tag=VMS06_RS06675;product=murein transglycosylase;protein_id=WP_063843839.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 94885 95214 . + . ID=gene-VMS06_RS06680;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=VMS06_RS06680 NZ_JAVXZI010000004.1 Protein Homology CDS 94885 95214 . + 0 ID=cds-WP_003856511.1;Parent=gene-VMS06_RS06680;Dbxref=GenBank:WP_003856511.1;Name=WP_003856511.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856511.1;locus_tag=VMS06_RS06680;product=trp operon repressor;protein_id=WP_003856511.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 95242 95757 . - . ID=gene-VMS06_RS06685;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=VMS06_RS06685 NZ_JAVXZI010000004.1 Protein Homology CDS 95242 95757 . - 0 ID=cds-WP_022646994.1;Parent=gene-VMS06_RS06685;Dbxref=GenBank:WP_022646994.1;Name=WP_022646994.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225002.1;locus_tag=VMS06_RS06685;product=inosine/xanthosine triphosphatase;protein_id=WP_022646994.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 95806 96453 . + . ID=gene-VMS06_RS06690;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=VMS06_RS06690 NZ_JAVXZI010000004.1 Protein Homology CDS 95806 96453 . + 0 ID=cds-WP_006810187.1;Parent=gene-VMS06_RS06690;Dbxref=GenBank:WP_006810187.1;Name=WP_006810187.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463441.1;locus_tag=VMS06_RS06690;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_006810187.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 96450 97319 . - . ID=gene-VMS06_RS06695;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=VMS06_RS06695 NZ_JAVXZI010000004.1 Protein Homology CDS 96450 97319 . - 0 ID=cds-WP_022646995.1;Parent=gene-VMS06_RS06695;Dbxref=GenBank:WP_022646995.1;Name=WP_022646995.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313381.1;locus_tag=VMS06_RS06695;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_022646995.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 97534 98004 . + . ID=gene-VMS06_RS06700;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=VMS06_RS06700 NZ_JAVXZI010000004.1 Protein Homology CDS 97534 98004 . + 0 ID=cds-WP_003856503.1;Parent=gene-VMS06_RS06700;Dbxref=GenBank:WP_003856503.1;Name=WP_003856503.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383825.1;locus_tag=VMS06_RS06700;product=protein CreA;protein_id=WP_003856503.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 98053 98769 . - . ID=gene-VMS06_RS06705;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=VMS06_RS06705 NZ_JAVXZI010000004.1 Protein Homology CDS 98053 98769 . - 0 ID=cds-WP_003856501.1;Parent=gene-VMS06_RS06705;Dbxref=GenBank:WP_003856501.1;Name=WP_003856501.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=VMS06_RS06705;product=two-component system response regulator ArcA;protein_id=WP_003856501.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 98865 99005 . + . ID=gene-VMS06_RS06710;Name=yjjY;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=VMS06_RS06710 NZ_JAVXZI010000004.1 Protein Homology CDS 98865 99005 . + 0 ID=cds-WP_001541509.1;Parent=gene-VMS06_RS06710;Dbxref=GenBank:WP_001541509.1;Name=WP_001541509.1;gbkey=CDS;gene=yjjY;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418819.1;locus_tag=VMS06_RS06710;product=YjjY family protein;protein_id=WP_001541509.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 99405 100091 . + . ID=gene-VMS06_RS06715;Name=VMS06_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06715 NZ_JAVXZI010000004.1 Protein Homology CDS 99405 100091 . + 0 ID=cds-WP_063148251.1;Parent=gene-VMS06_RS06715;Dbxref=GenBank:WP_063148251.1;Name=WP_063148251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418820.1;locus_tag=VMS06_RS06715;product=tRNA/rRNA methyltransferase;protein_id=WP_063148251.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 100303 100371 . + . ID=gene-VMS06_RS06720;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=VMS06_RS06720 NZ_JAVXZI010000004.1 Protein Homology CDS 100303 100371 . + 0 ID=cds-WP_015572623.1;Parent=gene-VMS06_RS06720;Dbxref=GenBank:WP_015572623.1;Name=WP_015572623.1;gbkey=CDS;gene=thrL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414542.1;locus_tag=VMS06_RS06720;product=thr operon leader peptide;protein_id=WP_015572623.1;transl_table=11 NZ_JAVXZI010000004.1 cmsearch sequence_feature 100310 100427 . + . ID=id-NZ_JAVXZI010000004.1:100310..100427;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVXZI010000004.1 RefSeq gene 100452 102914 . + . ID=gene-VMS06_RS06725;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=VMS06_RS06725 NZ_JAVXZI010000004.1 Protein Homology CDS 100452 102914 . + 0 ID=cds-WP_022646997.1;Parent=gene-VMS06_RS06725;Dbxref=GenBank:WP_022646997.1;Name=WP_022646997.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=VMS06_RS06725;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_022646997.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 102916 103845 . + . ID=gene-VMS06_RS06730;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=VMS06_RS06730 NZ_JAVXZI010000004.1 Protein Homology CDS 102916 103845 . + 0 ID=cds-WP_023299286.1;Parent=gene-VMS06_RS06730;Dbxref=GenBank:WP_023299286.1;Name=WP_023299286.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225013.1;locus_tag=VMS06_RS06730;product=homoserine kinase;protein_id=WP_023299286.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 103849 105135 . + . ID=gene-VMS06_RS06735;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=VMS06_RS06735 NZ_JAVXZI010000004.1 Protein Homology CDS 103849 105135 . + 0 ID=cds-WP_003856490.1;Parent=gene-VMS06_RS06735;Dbxref=GenBank:WP_003856490.1;Name=WP_003856490.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856490.1;locus_tag=VMS06_RS06735;product=threonine synthase;protein_id=WP_003856490.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 105384 105671 . + . ID=gene-VMS06_RS06740;Name=VMS06_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06740 NZ_JAVXZI010000004.1 Protein Homology CDS 105384 105671 . + 0 ID=cds-WP_022646999.1;Parent=gene-VMS06_RS06740;Dbxref=GenBank:WP_022646999.1;Name=WP_022646999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572627.1;locus_tag=VMS06_RS06740;product=DUF2502 domain-containing protein;protein_id=WP_022646999.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 105703 106476 . - . ID=gene-VMS06_RS06745;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=VMS06_RS06745 NZ_JAVXZI010000004.1 Protein Homology CDS 105703 106476 . - 0 ID=cds-WP_063148250.1;Parent=gene-VMS06_RS06745;Dbxref=GenBank:WP_063148250.1;Name=WP_063148250.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124060.1;locus_tag=VMS06_RS06745;product=peroxide stress protein YaaA;protein_id=WP_063148250.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 106543 107976 . - . ID=gene-VMS06_RS06750;Name=VMS06_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06750 NZ_JAVXZI010000004.1 Protein Homology CDS 106543 107976 . - 0 ID=cds-WP_023299289.1;Parent=gene-VMS06_RS06750;Dbxref=GenBank:WP_023299289.1;Name=WP_023299289.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882539.1;locus_tag=VMS06_RS06750;product=alanine/glycine:cation symporter family protein;protein_id=WP_023299289.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 108239 109192 . + . ID=gene-VMS06_RS06755;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=VMS06_RS06755 NZ_JAVXZI010000004.1 Protein Homology CDS 108239 109192 . + 0 ID=cds-WP_003856481.1;Parent=gene-VMS06_RS06755;Dbxref=GenBank:WP_003856481.1;Name=WP_003856481.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459012.1;locus_tag=VMS06_RS06755;product=transaldolase;protein_id=WP_003856481.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 109303 109890 . + . ID=gene-VMS06_RS06760;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=VMS06_RS06760 NZ_JAVXZI010000004.1 Protein Homology CDS 109303 109890 . + 0 ID=cds-WP_003856479.1;Parent=gene-VMS06_RS06760;Dbxref=GenBank:WP_003856479.1;Name=WP_003856479.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225019.1;locus_tag=VMS06_RS06760;product=molybdopterin adenylyltransferase;protein_id=WP_003856479.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 110013 111335 . + . ID=gene-VMS06_RS06765;Name=VMS06_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06765 NZ_JAVXZI010000004.1 Protein Homology CDS 110013 111335 . + 0 ID=cds-WP_023305417.1;Parent=gene-VMS06_RS06765;Dbxref=GenBank:WP_023305417.1;Name=WP_023305417.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502043.1;locus_tag=VMS06_RS06765;product=MFS transporter;protein_id=WP_023305417.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 111312 111878 . - . ID=gene-VMS06_RS06770;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=VMS06_RS06770 NZ_JAVXZI010000004.1 Protein Homology CDS 111312 111878 . - 0 ID=cds-WP_022647004.1;Parent=gene-VMS06_RS06770;Dbxref=GenBank:WP_022647004.1;Name=WP_022647004.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308037.1;locus_tag=VMS06_RS06770;product=acetate uptake transporter;protein_id=WP_022647004.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 112175 114088 . + . ID=gene-VMS06_RS06775;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=VMS06_RS06775 NZ_JAVXZI010000004.1 Protein Homology CDS 112175 114088 . + 0 ID=cds-WP_006810169.1;Parent=gene-VMS06_RS06775;Dbxref=GenBank:WP_006810169.1;Name=WP_006810169.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=VMS06_RS06775;product=molecular chaperone DnaK;protein_id=WP_006810169.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 114176 115321 . + . ID=gene-VMS06_RS06780;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=VMS06_RS06780 NZ_JAVXZI010000004.1 Protein Homology CDS 114176 115321 . + 0 ID=cds-WP_008502040.1;Parent=gene-VMS06_RS06780;Dbxref=GenBank:WP_008502040.1;Name=WP_008502040.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225025.1;locus_tag=VMS06_RS06780;product=molecular chaperone DnaJ;protein_id=WP_008502040.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 115495 116670 . + . ID=gene-VMS06_RS06785;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=VMS06_RS06785 NZ_JAVXZI010000004.1 Protein Homology CDS 115495 116670 . + 0 ID=cds-WP_032625424.1;Parent=gene-VMS06_RS06785;Dbxref=GenBank:WP_032625424.1;Name=WP_032625424.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383817.1;locus_tag=VMS06_RS06785;product=Na+/H+ antiporter NhaA;protein_id=WP_032625424.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 116729 117628 . + . ID=gene-VMS06_RS06790;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=VMS06_RS06790 NZ_JAVXZI010000004.1 Protein Homology CDS 116729 117628 . + 0 ID=cds-WP_003856462.1;Parent=gene-VMS06_RS06790;Dbxref=GenBank:WP_003856462.1;Name=WP_003856462.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882493.1;locus_tag=VMS06_RS06790;product=transcriptional activator NhaR;protein_id=WP_003856462.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 117687 117950 . - . ID=gene-VMS06_RS06795;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=VMS06_RS06795 NZ_JAVXZI010000004.1 Protein Homology CDS 117687 117950 . - 0 ID=cds-WP_003856458.1;Parent=gene-VMS06_RS06795;Dbxref=GenBank:WP_003856458.1;Name=WP_003856458.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=VMS06_RS06795;product=30S ribosomal protein S20;protein_id=WP_003856458.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq pseudogene 118052 118269 . + . ID=gene-VMS06_RS22860;Name=VMS06_RS22860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22860;pseudo=true NZ_JAVXZI010000004.1 Protein Homology CDS 118052 118269 . + 0 ID=cds-VMS06_RS22860;Parent=gene-VMS06_RS22860;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001303784.1;locus_tag=VMS06_RS22860;product=DUF2575 domain-containing protein;pseudo=true;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 118277 119203 . + . ID=gene-VMS06_RS06800;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=VMS06_RS06800 NZ_JAVXZI010000004.1 Protein Homology CDS 118277 119203 . + 0 ID=cds-WP_023299293.1;Parent=gene-VMS06_RS06800;Dbxref=GenBank:WP_023299293.1;Name=WP_023299293.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856456.1;locus_tag=VMS06_RS06800;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_023299293.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 119249 122065 . + . ID=gene-VMS06_RS06805;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=VMS06_RS06805 NZ_JAVXZI010000004.1 Protein Homology CDS 119249 122065 . + 0 ID=cds-WP_063148248.1;Parent=gene-VMS06_RS06805;Dbxref=GenBank:WP_063148248.1;Name=WP_063148248.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=VMS06_RS06805;product=isoleucine--tRNA ligase;protein_id=WP_063148248.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 122065 122565 . + . ID=gene-VMS06_RS06810;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=VMS06_RS06810 NZ_JAVXZI010000004.1 Protein Homology CDS 122065 122565 . + 0 ID=cds-WP_063148247.1;Parent=gene-VMS06_RS06810;Dbxref=GenBank:WP_063148247.1;Name=WP_063148247.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459052.1;locus_tag=VMS06_RS06810;product=signal peptidase II;protein_id=WP_063148247.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 122682 123131 . + . ID=gene-VMS06_RS06815;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=VMS06_RS06815 NZ_JAVXZI010000004.1 Protein Homology CDS 122682 123131 . + 0 ID=cds-WP_022647009.1;Parent=gene-VMS06_RS06815;Dbxref=GenBank:WP_022647009.1;Name=WP_022647009.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225033.1;locus_tag=VMS06_RS06815;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_022647009.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 123133 124083 . + . ID=gene-VMS06_RS06820;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=VMS06_RS06820 NZ_JAVXZI010000004.1 Protein Homology CDS 123133 124083 . + 0 ID=cds-WP_022647010.1;Parent=gene-VMS06_RS06820;Dbxref=GenBank:WP_022647010.1;Name=WP_022647010.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=VMS06_RS06820;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_022647010.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 124289 125110 . + . ID=gene-VMS06_RS06825;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=VMS06_RS06825 NZ_JAVXZI010000004.1 Protein Homology CDS 124289 125110 . + 0 ID=cds-WP_022647011.1;Parent=gene-VMS06_RS06825;Dbxref=GenBank:WP_022647011.1;Name=WP_022647011.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308061.1;locus_tag=VMS06_RS06825;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_022647011.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 125566 126714 . + . ID=gene-VMS06_RS06830;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=VMS06_RS06830 NZ_JAVXZI010000004.1 Protein Homology CDS 125566 126714 . + 0 ID=cds-WP_023299297.1;Parent=gene-VMS06_RS06830;Dbxref=GenBank:WP_023299297.1;Name=WP_023299297.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308062.1;locus_tag=VMS06_RS06830;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_023299297.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 126733 129957 . + . ID=gene-VMS06_RS06835;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=VMS06_RS06835 NZ_JAVXZI010000004.1 Protein Homology CDS 126733 129957 . + 0 ID=cds-WP_022647013.1;Parent=gene-VMS06_RS06835;Dbxref=GenBank:WP_022647013.1;Name=WP_022647013.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225053.1;locus_tag=VMS06_RS06835;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_022647013.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 130140 130373 . + . ID=gene-VMS06_RS06840;Name=VMS06_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06840 NZ_JAVXZI010000004.1 Protein Homology CDS 130140 130373 . + 0 ID=cds-WP_003856439.1;Parent=gene-VMS06_RS06840;Dbxref=GenBank:WP_003856439.1;Name=WP_003856439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502027.1;locus_tag=VMS06_RS06840;product=YgdI/YgdR family lipoprotein;protein_id=WP_003856439.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 130423 132756 . - . ID=gene-VMS06_RS06845;Name=VMS06_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06845 NZ_JAVXZI010000004.1 Protein Homology CDS 130423 132756 . - 0 ID=cds-WP_420536421.1;Parent=gene-VMS06_RS06845;Dbxref=GenBank:WP_420536421.1;Name=WP_420536421.1;Ontology_term=GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694534.1;locus_tag=VMS06_RS06845;product=autotransporter family protein;protein_id=WP_420536421.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 133829 134359 . + . ID=gene-VMS06_RS06850;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=VMS06_RS06850 NZ_JAVXZI010000004.1 Protein Homology CDS 133829 134359 . + 0 ID=cds-WP_063148244.1;Parent=gene-VMS06_RS06850;Dbxref=GenBank:WP_063148244.1;Name=WP_063148244.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706002.1;locus_tag=VMS06_RS06850;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_063148244.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 134352 136217 . + . ID=gene-VMS06_RS06855;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=VMS06_RS06855 NZ_JAVXZI010000004.1 Protein Homology CDS 134352 136217 . + 0 ID=cds-WP_063148243.1;Parent=gene-VMS06_RS06855;Dbxref=GenBank:WP_063148243.1;Name=WP_063148243.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225056.1;locus_tag=VMS06_RS06855;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_063148243.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 136332 136811 . + . ID=gene-VMS06_RS06860;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=VMS06_RS06860 NZ_JAVXZI010000004.1 Protein Homology CDS 136332 136811 . + 0 ID=cds-WP_003856431.1;Parent=gene-VMS06_RS06860;Dbxref=GenBank:WP_003856431.1;Name=WP_003856431.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=VMS06_RS06860;product=type 3 dihydrofolate reductase;protein_id=WP_003856431.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 136851 137699 . - . ID=gene-VMS06_RS06865;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=VMS06_RS06865 NZ_JAVXZI010000004.1 Protein Homology CDS 136851 137699 . - 0 ID=cds-WP_022647017.1;Parent=gene-VMS06_RS06865;Dbxref=GenBank:WP_022647017.1;Name=WP_022647017.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308081.1;locus_tag=VMS06_RS06865;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_022647017.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 137704 138081 . - . ID=gene-VMS06_RS06870;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=VMS06_RS06870 NZ_JAVXZI010000004.1 Protein Homology CDS 137704 138081 . - 0 ID=cds-WP_003856425.1;Parent=gene-VMS06_RS06870;Dbxref=GenBank:WP_003856425.1;Name=WP_003856425.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459094.1;locus_tag=VMS06_RS06870;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_003856425.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 138085 138906 . - . ID=gene-VMS06_RS06875;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=VMS06_RS06875 NZ_JAVXZI010000004.1 Protein Homology CDS 138085 138906 . - 0 ID=cds-WP_003856423.1;Parent=gene-VMS06_RS06875;Dbxref=GenBank:WP_003856423.1;Name=WP_003856423.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225060.1;locus_tag=VMS06_RS06875;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_003856423.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 138903 139889 . - . ID=gene-VMS06_RS06880;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=VMS06_RS06880 NZ_JAVXZI010000004.1 Protein Homology CDS 138903 139889 . - 0 ID=cds-WP_063148242.1;Parent=gene-VMS06_RS06880;Dbxref=GenBank:WP_063148242.1;Name=WP_063148242.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830618.1;locus_tag=VMS06_RS06880;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_063148242.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 139889 141175 . - . ID=gene-VMS06_RS06885;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=VMS06_RS06885 NZ_JAVXZI010000004.1 Protein Homology CDS 139889 141175 . - 0 ID=cds-WP_003856417.1;Parent=gene-VMS06_RS06885;Dbxref=GenBank:WP_003856417.1;Name=WP_003856417.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308085.1;locus_tag=VMS06_RS06885;product=peptidylprolyl isomerase SurA;protein_id=WP_003856417.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 141229 143580 . - . ID=gene-VMS06_RS06890;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=VMS06_RS06890 NZ_JAVXZI010000004.1 Protein Homology CDS 141229 143580 . - 0 ID=cds-WP_023299304.1;Parent=gene-VMS06_RS06890;Dbxref=GenBank:WP_023299304.1;Name=WP_023299304.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459098.1;locus_tag=VMS06_RS06890;product=LPS assembly protein LptD;protein_id=WP_023299304.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 143820 144635 . + . ID=gene-VMS06_RS06895;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=VMS06_RS06895 NZ_JAVXZI010000004.1 Protein Homology CDS 143820 144635 . + 0 ID=cds-WP_023299305.1;Parent=gene-VMS06_RS06895;Dbxref=GenBank:WP_023299305.1;Name=WP_023299305.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459099.1;locus_tag=VMS06_RS06895;product=co-chaperone DjlA;protein_id=WP_023299305.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 144667 145326 . - . ID=gene-VMS06_RS06900;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=VMS06_RS06900 NZ_JAVXZI010000004.1 Protein Homology CDS 144667 145326 . - 0 ID=cds-WP_058677767.1;Parent=gene-VMS06_RS06900;Dbxref=GenBank:WP_058677767.1;Name=WP_058677767.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225070.1;locus_tag=VMS06_RS06900;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_058677767.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 145339 148245 . - . ID=gene-VMS06_RS06905;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=VMS06_RS06905 NZ_JAVXZI010000004.1 Protein Homology CDS 145339 148245 . - 0 ID=cds-WP_023299306.1;Parent=gene-VMS06_RS06905;Dbxref=GenBank:WP_023299306.1;Name=WP_023299306.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=VMS06_RS06905;product=RNA polymerase-associated protein RapA;protein_id=WP_023299306.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 148373 150730 . - . ID=gene-VMS06_RS06910;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=VMS06_RS06910 NZ_JAVXZI010000004.1 Protein Homology CDS 148373 150730 . - 0 ID=cds-WP_063137942.1;Parent=gene-VMS06_RS06910;Dbxref=GenBank:WP_063137942.1;Name=WP_063137942.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006173898.1;locus_tag=VMS06_RS06910;product=DNA polymerase II;protein_id=WP_063137942.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 150886 151581 . - . ID=gene-VMS06_RS06915;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=VMS06_RS06915 NZ_JAVXZI010000004.1 Protein Homology CDS 150886 151581 . - 0 ID=cds-WP_022647024.1;Parent=gene-VMS06_RS06915;Dbxref=GenBank:WP_022647024.1;Name=WP_022647024.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414603.1;locus_tag=VMS06_RS06915;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_022647024.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 151668 153170 . - . ID=gene-VMS06_RS06920;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=VMS06_RS06920 NZ_JAVXZI010000004.1 Protein Homology CDS 151668 153170 . - 0 ID=cds-WP_015572656.1;Parent=gene-VMS06_RS06920;Dbxref=GenBank:WP_015572656.1;Name=WP_015572656.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225074.1;locus_tag=VMS06_RS06920;product=L-arabinose isomerase;protein_id=WP_015572656.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 153181 154890 . - . ID=gene-VMS06_RS06925;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=VMS06_RS06925 NZ_JAVXZI010000004.1 Protein Homology CDS 153181 154890 . - 0 ID=cds-WP_063148240.1;Parent=gene-VMS06_RS06925;Dbxref=GenBank:WP_063148240.1;Name=WP_063148240.1;Ontology_term=GO:0019568,GO:0005524,GO:0008741;gbkey=CDS;gene=araB;go_function=ATP binding|0005524||IEA,ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459108.1;locus_tag=VMS06_RS06925;product=ribulokinase;protein_id=WP_063148240.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 155226 156071 . + . ID=gene-VMS06_RS06930;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=VMS06_RS06930 NZ_JAVXZI010000004.1 Protein Homology CDS 155226 156071 . + 0 ID=cds-WP_323630629.1;Parent=gene-VMS06_RS06930;Dbxref=GenBank:WP_323630629.1;Name=WP_323630629.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225077.1;locus_tag=VMS06_RS06930;product=arabinose operon transcriptional regulator AraC;protein_id=WP_323630629.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 156190 156957 . + . ID=gene-VMS06_RS06935;Name=VMS06_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06935 NZ_JAVXZI010000004.1 Protein Homology CDS 156190 156957 . + 0 ID=cds-WP_017383796.1;Parent=gene-VMS06_RS06935;Dbxref=GenBank:WP_017383796.1;Name=WP_017383796.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016021.1;locus_tag=VMS06_RS06935;product=DedA family protein;protein_id=WP_017383796.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 157438 158139 . - . ID=gene-VMS06_RS06940;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=VMS06_RS06940 NZ_JAVXZI010000004.1 Protein Homology CDS 157438 158139 . - 0 ID=cds-WP_032625461.1;Parent=gene-VMS06_RS06940;Dbxref=GenBank:WP_032625461.1;Name=WP_032625461.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810131.1;locus_tag=VMS06_RS06940;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_032625461.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 158123 159733 . - . ID=gene-VMS06_RS06945;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=VMS06_RS06945 NZ_JAVXZI010000004.1 Protein Homology CDS 158123 159733 . - 0 ID=cds-WP_063148355.1;Parent=gene-VMS06_RS06945;Dbxref=GenBank:WP_063148355.1;Name=WP_063148355.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706020.1;locus_tag=VMS06_RS06945;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_063148355.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 159709 160692 . - . ID=gene-VMS06_RS06950;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=VMS06_RS06950 NZ_JAVXZI010000004.1 Protein Homology CDS 159709 160692 . - 0 ID=cds-WP_023299313.1;Parent=gene-VMS06_RS06950;Dbxref=GenBank:WP_023299313.1;Name=WP_023299313.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459113.1;locus_tag=VMS06_RS06950;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_023299313.1;transl_table=11 NZ_JAVXZI010000004.1 cmsearch riboswitch 160724 160824 . - . ID=id-NZ_JAVXZI010000004.1:160724..160824;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVXZI010000004.1 RefSeq gene 160861 162516 . - . ID=gene-VMS06_RS06955;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=VMS06_RS06955 NZ_JAVXZI010000004.1 Protein Homology CDS 160861 162516 . - 0 ID=cds-WP_063148356.1;Parent=gene-VMS06_RS06955;Dbxref=GenBank:WP_063148356.1;Name=WP_063148356.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459114.1;locus_tag=VMS06_RS06955;product=HTH-type transcriptional regulator SgrR;protein_id=WP_063148356.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 162605 162757 . + . ID=gene-VMS06_RS06960;Name=sgrT;gbkey=Gene;gene=sgrT;gene_biotype=protein_coding;locus_tag=VMS06_RS06960 NZ_JAVXZI010000004.1 Protein Homology CDS 162605 162757 . + 0 ID=cds-WP_003856388.1;Parent=gene-VMS06_RS06960;Dbxref=GenBank:WP_003856388.1;Name=WP_003856388.1;Ontology_term=GO:0046325;gbkey=CDS;gene=sgrT;go_process=negative regulation of D-glucose import across plasma membrane|0046325||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427011.1;locus_tag=VMS06_RS06960;product=glucose uptake inhibitor SgrT;protein_id=WP_003856388.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 162878 164056 . + . ID=gene-VMS06_RS06965;Name=VMS06_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06965 NZ_JAVXZI010000004.1 Protein Homology CDS 162878 164056 . + 0 ID=cds-WP_058645797.1;Parent=gene-VMS06_RS06965;Dbxref=GenBank:WP_058645797.1;Name=WP_058645797.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225085.1;locus_tag=VMS06_RS06965;product=sugar efflux transporter;protein_id=WP_058645797.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 164274 164426 . + . ID=gene-VMS06_RS06970;Name=VMS06_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS06970 NZ_JAVXZI010000004.1 Protein Homology CDS 164274 164426 . + 0 ID=cds-WP_010427008.1;Parent=gene-VMS06_RS06970;Dbxref=GenBank:WP_010427008.1;Name=WP_010427008.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427008.1;locus_tag=VMS06_RS06970;product=Hok/Gef family protein;protein_id=WP_010427008.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 164517 165122 . - . ID=gene-VMS06_RS06975;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=VMS06_RS06975 NZ_JAVXZI010000004.1 Protein Homology CDS 164517 165122 . - 0 ID=cds-WP_023299315.1;Parent=gene-VMS06_RS06975;Dbxref=GenBank:WP_023299315.1;Name=WP_023299315.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012125770.1;locus_tag=VMS06_RS06975;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_023299315.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 165133 166533 . - . ID=gene-VMS06_RS06980;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=VMS06_RS06980 NZ_JAVXZI010000004.1 Protein Homology CDS 165133 166533 . - 0 ID=cds-WP_023299316.1;Parent=gene-VMS06_RS06980;Dbxref=GenBank:WP_023299316.1;Name=WP_023299316.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414614.1;locus_tag=VMS06_RS06980;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_023299316.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 166536 167627 . - . ID=gene-VMS06_RS06985;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=VMS06_RS06985 NZ_JAVXZI010000004.1 Protein Homology CDS 166536 167627 . - 0 ID=cds-WP_022647034.1;Parent=gene-VMS06_RS06985;Dbxref=GenBank:WP_022647034.1;Name=WP_022647034.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=VMS06_RS06985;product=3-isopropylmalate dehydrogenase;protein_id=WP_022647034.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 167627 169198 . - . ID=gene-VMS06_RS06990;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=VMS06_RS06990 NZ_JAVXZI010000004.1 Protein Homology CDS 167627 169198 . - 0 ID=cds-WP_022647035.1;Parent=gene-VMS06_RS06990;Dbxref=GenBank:WP_022647035.1;Name=WP_022647035.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=VMS06_RS06990;product=2-isopropylmalate synthase;protein_id=WP_022647035.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 169290 169376 . - . ID=gene-VMS06_RS22865;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=VMS06_RS22865 NZ_JAVXZI010000004.1 Protein Homology CDS 169290 169376 . - 0 ID=cds-WP_057979999.1;Parent=gene-VMS06_RS22865;Dbxref=GenBank:WP_057979999.1;Name=WP_057979999.1;Ontology_term=GO:0009098;gbkey=CDS;gene=leuL;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: protein motif:HMM:NF019666.7;locus_tag=VMS06_RS22865;product=leu operon leader peptide;protein_id=WP_057979999.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 170003 170947 . + . ID=gene-VMS06_RS06995;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=VMS06_RS06995 NZ_JAVXZI010000004.1 Protein Homology CDS 170003 170947 . + 0 ID=cds-WP_323630630.1;Parent=gene-VMS06_RS06995;Dbxref=GenBank:WP_323630630.1;Name=WP_323630630.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383788.1;locus_tag=VMS06_RS06995;product=transcriptional regulator LeuO;protein_id=WP_323630630.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 171324 173048 . + . ID=gene-VMS06_RS07000;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=VMS06_RS07000 NZ_JAVXZI010000004.1 Protein Homology CDS 171324 173048 . + 0 ID=cds-WP_023299318.1;Parent=gene-VMS06_RS07000;Dbxref=GenBank:WP_023299318.1;Name=WP_023299318.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=VMS06_RS07000;product=acetolactate synthase 3 large subunit;protein_id=WP_023299318.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 173050 173544 . + . ID=gene-VMS06_RS07005;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=VMS06_RS07005 NZ_JAVXZI010000004.1 Protein Homology CDS 173050 173544 . + 0 ID=cds-WP_001252742.1;Parent=gene-VMS06_RS07005;Dbxref=GenBank:WP_001252742.1;Name=WP_001252742.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001252742.1;locus_tag=VMS06_RS07005;product=acetolactate synthase small subunit;protein_id=WP_001252742.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 173721 174725 . + . ID=gene-VMS06_RS07010;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=VMS06_RS07010 NZ_JAVXZI010000004.1 Protein Homology CDS 173721 174725 . + 0 ID=cds-WP_003856369.1;Parent=gene-VMS06_RS07010;Dbxref=GenBank:WP_003856369.1;Name=WP_003856369.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856369.1;locus_tag=VMS06_RS07010;product=catabolite repressor/activator;protein_id=WP_003856369.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 175317 175775 . + . ID=gene-VMS06_RS07015;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=VMS06_RS07015 NZ_JAVXZI010000004.1 Protein Homology CDS 175317 175775 . + 0 ID=cds-WP_014830641.1;Parent=gene-VMS06_RS07015;Dbxref=GenBank:WP_014830641.1;Name=WP_014830641.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=VMS06_RS07015;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_014830641.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 175778 176719 . + . ID=gene-VMS06_RS07020;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=VMS06_RS07020 NZ_JAVXZI010000004.1 Protein Homology CDS 175778 176719 . + 0 ID=cds-WP_003856366.1;Parent=gene-VMS06_RS07020;Dbxref=GenBank:WP_003856366.1;Name=WP_003856366.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=VMS06_RS07020;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_003856366.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 176716 177081 . + . ID=gene-VMS06_RS07025;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=VMS06_RS07025 NZ_JAVXZI010000004.1 Protein Homology CDS 176716 177081 . + 0 ID=cds-WP_003856363.1;Parent=gene-VMS06_RS07025;Dbxref=GenBank:WP_003856363.1;Name=WP_003856363.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=VMS06_RS07025;product=cell division protein FtsL;protein_id=WP_003856363.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 177097 178863 . + . ID=gene-VMS06_RS07030;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=VMS06_RS07030 NZ_JAVXZI010000004.1 Protein Homology CDS 177097 178863 . + 0 ID=cds-WP_022647040.1;Parent=gene-VMS06_RS07030;Dbxref=GenBank:WP_022647040.1;Name=WP_022647040.1;gbkey=CDS;gene=ftsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=VMS06_RS07030;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_022647040.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 178850 180337 . + . ID=gene-VMS06_RS07035;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=VMS06_RS07035 NZ_JAVXZI010000004.1 Protein Homology CDS 178850 180337 . + 0 ID=cds-WP_063148357.1;Parent=gene-VMS06_RS07035;Dbxref=GenBank:WP_063148357.1;Name=WP_063148357.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414627.1;locus_tag=VMS06_RS07035;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_063148357.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 180334 181692 . + . ID=gene-VMS06_RS07040;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=VMS06_RS07040 NZ_JAVXZI010000004.1 Protein Homology CDS 180334 181692 . + 0 ID=cds-WP_063148358.1;Parent=gene-VMS06_RS07040;Dbxref=GenBank:WP_063148358.1;Name=WP_063148358.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414628.1;locus_tag=VMS06_RS07040;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_063148358.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 181686 182768 . + . ID=gene-VMS06_RS07045;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=VMS06_RS07045 NZ_JAVXZI010000004.1 Protein Homology CDS 181686 182768 . + 0 ID=cds-WP_003856353.1;Parent=gene-VMS06_RS07045;Dbxref=GenBank:WP_003856353.1;Name=WP_003856353.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=VMS06_RS07045;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_003856353.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 182771 184087 . + . ID=gene-VMS06_RS07050;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=VMS06_RS07050 NZ_JAVXZI010000004.1 Protein Homology CDS 182771 184087 . + 0 ID=cds-WP_063148359.1;Parent=gene-VMS06_RS07050;Dbxref=GenBank:WP_063148359.1;Name=WP_063148359.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=VMS06_RS07050;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_063148359.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 184087 185331 . + . ID=gene-VMS06_RS07055;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=VMS06_RS07055 NZ_JAVXZI010000004.1 Protein Homology CDS 184087 185331 . + 0 ID=cds-WP_022647044.1;Parent=gene-VMS06_RS07055;Dbxref=GenBank:WP_022647044.1;Name=WP_022647044.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459132.1;locus_tag=VMS06_RS07055;product=cell division protein FtsW;protein_id=WP_022647044.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 185328 186392 . + . ID=gene-VMS06_RS07060;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=VMS06_RS07060 NZ_JAVXZI010000004.1 Protein Homology CDS 185328 186392 . + 0 ID=cds-WP_063148361.1;Parent=gene-VMS06_RS07060;Dbxref=GenBank:WP_063148361.1;Name=WP_063148361.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810114.1;locus_tag=VMS06_RS07060;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_063148361.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 186452 187927 . + . ID=gene-VMS06_RS07065;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=VMS06_RS07065 NZ_JAVXZI010000004.1 Protein Homology CDS 186452 187927 . + 0 ID=cds-WP_022647046.1;Parent=gene-VMS06_RS07065;Dbxref=GenBank:WP_022647046.1;Name=WP_022647046.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=VMS06_RS07065;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_022647046.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 187920 188840 . + . ID=gene-VMS06_RS07070;Name=VMS06_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07070 NZ_JAVXZI010000004.1 Protein Homology CDS 187920 188840 . + 0 ID=cds-WP_023330111.1;Parent=gene-VMS06_RS07070;Dbxref=GenBank:WP_023330111.1;Name=WP_023330111.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225113.1;locus_tag=VMS06_RS07070;product=D-alanine--D-alanine ligase;protein_id=WP_023330111.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 188842 189684 . + . ID=gene-VMS06_RS07075;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=VMS06_RS07075 NZ_JAVXZI010000004.1 Protein Homology CDS 188842 189684 . + 0 ID=cds-WP_003856342.1;Parent=gene-VMS06_RS07075;Dbxref=GenBank:WP_003856342.1;Name=WP_003856342.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459136.1;locus_tag=VMS06_RS07075;product=cell division protein FtsQ;protein_id=WP_003856342.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 189681 190937 . + . ID=gene-VMS06_RS07080;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=VMS06_RS07080 NZ_JAVXZI010000004.1 Protein Homology CDS 189681 190937 . + 0 ID=cds-WP_003856340.1;Parent=gene-VMS06_RS07080;Dbxref=GenBank:WP_003856340.1;Name=WP_003856340.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459137.1;locus_tag=VMS06_RS07080;product=cell division protein FtsA;protein_id=WP_003856340.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 191001 192152 . + . ID=gene-VMS06_RS07085;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=VMS06_RS07085 NZ_JAVXZI010000004.1 Protein Homology CDS 191001 192152 . + 0 ID=cds-WP_022647048.1;Parent=gene-VMS06_RS07085;Dbxref=GenBank:WP_022647048.1;Name=WP_022647048.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=VMS06_RS07085;product=cell division protein FtsZ;protein_id=WP_022647048.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 192254 193171 . + . ID=gene-VMS06_RS07090;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=VMS06_RS07090 NZ_JAVXZI010000004.1 Protein Homology CDS 192254 193171 . + 0 ID=cds-WP_003856337.1;Parent=gene-VMS06_RS07090;Dbxref=GenBank:WP_003856337.1;Name=WP_003856337.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=VMS06_RS07090;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_003856337.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 193452 193955 . + . ID=gene-VMS06_RS07095;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=VMS06_RS07095 NZ_JAVXZI010000004.1 Protein Homology CDS 193452 193955 . + 0 ID=cds-WP_032677334.1;Parent=gene-VMS06_RS07095;Dbxref=GenBank:WP_032677334.1;Name=WP_032677334.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002888635.1;locus_tag=VMS06_RS07095;product=secA translation cis-regulator SecM;protein_id=WP_032677334.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 194014 196719 . + . ID=gene-VMS06_RS07100;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=VMS06_RS07100 NZ_JAVXZI010000004.1 Protein Homology CDS 194014 196719 . + 0 ID=cds-WP_022647050.1;Parent=gene-VMS06_RS07100;Dbxref=GenBank:WP_022647050.1;Name=WP_022647050.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704405.1;locus_tag=VMS06_RS07100;product=preprotein translocase subunit SecA;protein_id=WP_022647050.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 196777 197169 . + . ID=gene-VMS06_RS07105;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=VMS06_RS07105 NZ_JAVXZI010000004.1 Protein Homology CDS 196777 197169 . + 0 ID=cds-WP_032621758.1;Parent=gene-VMS06_RS07105;Dbxref=GenBank:WP_032621758.1;Name=WP_032621758.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856333.1;locus_tag=VMS06_RS07105;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_032621758.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 197204 197398 . - . ID=gene-VMS06_RS07110;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=VMS06_RS07110 NZ_JAVXZI010000004.1 Protein Homology CDS 197204 197398 . - 0 ID=cds-WP_003856332.1;Parent=gene-VMS06_RS07110;Dbxref=GenBank:WP_003856332.1;Name=WP_003856332.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856332.1;locus_tag=VMS06_RS07110;product=DNA gyrase inhibitor YacG;protein_id=WP_003856332.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 197408 198151 . - . ID=gene-VMS06_RS07115;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=VMS06_RS07115 NZ_JAVXZI010000004.1 Protein Homology CDS 197408 198151 . - 0 ID=cds-WP_022647052.1;Parent=gene-VMS06_RS07115;Dbxref=GenBank:WP_022647052.1;Name=WP_022647052.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459144.1;locus_tag=VMS06_RS07115;product=cell division protein ZapD;protein_id=WP_022647052.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 198151 198771 . - . ID=gene-VMS06_RS07120;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=VMS06_RS07120 NZ_JAVXZI010000004.1 Protein Homology CDS 198151 198771 . - 0 ID=cds-WP_022647053.1;Parent=gene-VMS06_RS07120;Dbxref=GenBank:WP_022647053.1;Name=WP_022647053.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308134.1;locus_tag=VMS06_RS07120;product=dephospho-CoA kinase;protein_id=WP_022647053.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 199000 200043 . + . ID=gene-VMS06_RS07125;Name=VMS06_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07125 NZ_JAVXZI010000004.1 Protein Homology CDS 199000 200043 . + 0 ID=cds-WP_022647054.1;Parent=gene-VMS06_RS07125;Dbxref=GenBank:WP_022647054.1;Name=WP_022647054.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=VMS06_RS07125;product=GMP reductase;protein_id=WP_022647054.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 200077 201261 . - . ID=gene-VMS06_RS07130;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=VMS06_RS07130 NZ_JAVXZI010000004.1 Protein Homology CDS 200077 201261 . - 0 ID=cds-WP_063148362.1;Parent=gene-VMS06_RS07130;Dbxref=GenBank:WP_063148362.1;Name=WP_063148362.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856326.1;locus_tag=VMS06_RS07130;product=protein transport protein HofC;protein_id=WP_063148362.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 201251 202630 . - . ID=gene-VMS06_RS07135;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=VMS06_RS07135 NZ_JAVXZI010000004.1 Protein Homology CDS 201251 202630 . - 0 ID=cds-WP_022647056.1;Parent=gene-VMS06_RS07135;Dbxref=GenBank:WP_022647056.1;Name=WP_022647056.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856325.1;locus_tag=VMS06_RS07135;product=type II secretion system protein GspE;protein_id=WP_022647056.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 202643 203080 . - . ID=gene-VMS06_RS07140;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=VMS06_RS07140 NZ_JAVXZI010000004.1 Protein Homology CDS 202643 203080 . - 0 ID=cds-WP_023299332.1;Parent=gene-VMS06_RS07140;Dbxref=GenBank:WP_023299332.1;Name=WP_023299332.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810100.1;locus_tag=VMS06_RS07140;product=prepilin peptidase-dependent pilin;protein_id=WP_023299332.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 203255 204148 . - . ID=gene-VMS06_RS07145;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=VMS06_RS07145 NZ_JAVXZI010000004.1 Protein Homology CDS 203255 204148 . - 0 ID=cds-WP_063148363.1;Parent=gene-VMS06_RS07145;Dbxref=GenBank:WP_063148363.1;Name=WP_063148363.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225130.1;locus_tag=VMS06_RS07145;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_063148363.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 204236 204799 . + . ID=gene-VMS06_RS07150;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=VMS06_RS07150 NZ_JAVXZI010000004.1 Protein Homology CDS 204236 204799 . + 0 ID=cds-WP_059593988.1;Parent=gene-VMS06_RS07150;Dbxref=GenBank:WP_059593988.1;Name=WP_059593988.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459151.1;locus_tag=VMS06_RS07150;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_059593988.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 204796 205650 . + . ID=gene-VMS06_RS07155;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=VMS06_RS07155 NZ_JAVXZI010000004.1 Protein Homology CDS 204796 205650 . + 0 ID=cds-WP_023299333.1;Parent=gene-VMS06_RS07155;Dbxref=GenBank:WP_023299333.1;Name=WP_023299333.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459152.1;locus_tag=VMS06_RS07155;product=beta-lactamase regulator AmpE;protein_id=WP_023299333.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 205669 206619 . - . ID=gene-VMS06_RS07160;Name=VMS06_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07160 NZ_JAVXZI010000004.1 Protein Homology CDS 205669 206619 . - 0 ID=cds-WP_063148365.1;Parent=gene-VMS06_RS07160;Dbxref=GenBank:WP_063148365.1;Name=WP_063148365.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014068918.1;locus_tag=VMS06_RS07160;product=glycoside hydrolase family 43 protein;protein_id=WP_063148365.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 206630 208027 . - . ID=gene-VMS06_RS07165;Name=VMS06_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07165 NZ_JAVXZI010000004.1 Protein Homology CDS 206630 208027 . - 0 ID=cds-WP_022647062.1;Parent=gene-VMS06_RS07165;Dbxref=GenBank:WP_022647062.1;Name=WP_022647062.1;Ontology_term=GO:0006812,GO:0008643,GO:0015486,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=glycoside-pentoside-hexuronide:cation symporter activity|0015486||IEA;go_process=monoatomic cation transport|0006812||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168649.1;locus_tag=VMS06_RS07165;product=glycoside-pentoside-hexuronide (GPH):cation symporter;protein_id=WP_022647062.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 208192 209562 . - . ID=gene-VMS06_RS07170;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=VMS06_RS07170 NZ_JAVXZI010000004.1 Protein Homology CDS 208192 209562 . - 0 ID=cds-WP_023299335.1;Parent=gene-VMS06_RS07170;Dbxref=GenBank:WP_023299335.1;Name=WP_023299335.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000399007.1;locus_tag=VMS06_RS07170;product=aromatic amino acid transporter AroP;protein_id=WP_023299335.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 210100 210864 . + . ID=gene-VMS06_RS07175;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=VMS06_RS07175 NZ_JAVXZI010000004.1 Protein Homology CDS 210100 210864 . + 0 ID=cds-WP_006173806.1;Parent=gene-VMS06_RS07175;Dbxref=GenBank:WP_006173806.1;Name=WP_006173806.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308144.1;locus_tag=VMS06_RS07175;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_006173806.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 210988 213651 . + . ID=gene-VMS06_RS07180;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=VMS06_RS07180 NZ_JAVXZI010000004.1 Protein Homology CDS 210988 213651 . + 0 ID=cds-WP_022647064.1;Parent=gene-VMS06_RS07180;Dbxref=GenBank:WP_022647064.1;Name=WP_022647064.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=VMS06_RS07180;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_022647064.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 213666 215561 . + . ID=gene-VMS06_RS07185;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=VMS06_RS07185 NZ_JAVXZI010000004.1 Protein Homology CDS 213666 215561 . + 0 ID=cds-WP_022647065.1;Parent=gene-VMS06_RS07185;Dbxref=GenBank:WP_022647065.1;Name=WP_022647065.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225139.1;locus_tag=VMS06_RS07185;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_022647065.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 215737 217161 . + . ID=gene-VMS06_RS07190;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=VMS06_RS07190 NZ_JAVXZI010000004.1 Protein Homology CDS 215737 217161 . + 0 ID=cds-WP_003856313.1;Parent=gene-VMS06_RS07190;Dbxref=GenBank:WP_003856313.1;Name=WP_003856313.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=VMS06_RS07190;product=dihydrolipoyl dehydrogenase;protein_id=WP_003856313.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 217214 218005 . - . ID=gene-VMS06_RS07195;Name=VMS06_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07195 NZ_JAVXZI010000004.1 Protein Homology CDS 217214 218005 . - 0 ID=cds-WP_032625516.1;Parent=gene-VMS06_RS07195;Dbxref=GenBank:WP_032625516.1;Name=WP_032625516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008786213.1;locus_tag=VMS06_RS07195;product=DUF2950 family protein;protein_id=WP_032625516.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 218016 219533 . - . ID=gene-VMS06_RS07200;Name=VMS06_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07200 NZ_JAVXZI010000004.1 Protein Homology CDS 218016 219533 . - 0 ID=cds-WP_063148366.1;Parent=gene-VMS06_RS07200;Dbxref=GenBank:WP_063148366.1;Name=WP_063148366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018676.1;locus_tag=VMS06_RS07200;product=DUF3300 domain-containing protein;protein_id=WP_063148366.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 219921 222518 . + . ID=gene-VMS06_RS07205;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=VMS06_RS07205 NZ_JAVXZI010000004.1 Protein Homology CDS 219921 222518 . + 0 ID=cds-WP_022647068.1;Parent=gene-VMS06_RS07205;Dbxref=GenBank:WP_022647068.1;Name=WP_022647068.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459163.1;locus_tag=VMS06_RS07205;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_022647068.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 222701 223063 . + . ID=gene-VMS06_RS07210;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=VMS06_RS07210 NZ_JAVXZI010000004.1 Protein Homology CDS 222701 223063 . + 0 ID=cds-WP_022647069.1;Parent=gene-VMS06_RS07210;Dbxref=GenBank:WP_022647069.1;Name=WP_022647069.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414661.2;locus_tag=VMS06_RS07210;product=protein YacL;protein_id=WP_022647069.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 223095 223889 . - . ID=gene-VMS06_RS07215;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=VMS06_RS07215 NZ_JAVXZI010000004.1 Protein Homology CDS 223095 223889 . - 0 ID=cds-WP_022647070.1;Parent=gene-VMS06_RS07215;Dbxref=GenBank:WP_022647070.1;Name=WP_022647070.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225147.1;locus_tag=VMS06_RS07215;product=adenosylmethionine decarboxylase;protein_id=WP_022647070.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 223890 224759 . - . ID=gene-VMS06_RS07220;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=VMS06_RS07220 NZ_JAVXZI010000004.1 Protein Homology CDS 223890 224759 . - 0 ID=cds-WP_063148368.1;Parent=gene-VMS06_RS07220;Dbxref=GenBank:WP_063148368.1;Name=WP_063148368.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572694.1;locus_tag=VMS06_RS07220;product=polyamine aminopropyltransferase;protein_id=WP_063148368.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 224861 225208 . - . ID=gene-VMS06_RS07225;Name=VMS06_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07225 NZ_JAVXZI010000004.1 Protein Homology CDS 224861 225208 . - 0 ID=cds-WP_003856306.1;Parent=gene-VMS06_RS07225;Dbxref=GenBank:WP_003856306.1;Name=WP_003856306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=VMS06_RS07225;product=YacC family pilotin-like protein;protein_id=WP_003856306.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 225354 226913 . + . ID=gene-VMS06_RS07230;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=VMS06_RS07230 NZ_JAVXZI010000004.1 Protein Homology CDS 225354 226913 . + 0 ID=cds-WP_063148369.1;Parent=gene-VMS06_RS07230;Dbxref=GenBank:WP_063148369.1;Name=WP_063148369.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383764.1;locus_tag=VMS06_RS07230;product=multicopper oxidase CueO;protein_id=WP_063148369.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 227000 229390 . - . ID=gene-VMS06_RS07235;Name=VMS06_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07235 NZ_JAVXZI010000004.1 Protein Homology CDS 227000 229390 . - 0 ID=cds-WP_063148370.1;Parent=gene-VMS06_RS07235;Dbxref=GenBank:WP_063148370.1;Name=WP_063148370.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225158.1;locus_tag=VMS06_RS07235;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_063148370.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 229597 230133 . + . ID=gene-VMS06_RS07240;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=VMS06_RS07240 NZ_JAVXZI010000004.1 Protein Homology CDS 229597 230133 . + 0 ID=cds-WP_003856303.1;Parent=gene-VMS06_RS07240;Dbxref=GenBank:WP_003856303.1;Name=WP_003856303.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=VMS06_RS07240;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_003856303.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 230198 230860 . - . ID=gene-VMS06_RS07245;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=VMS06_RS07245 NZ_JAVXZI010000004.1 Protein Homology CDS 230198 230860 . - 0 ID=cds-WP_003856301.1;Parent=gene-VMS06_RS07245;Dbxref=GenBank:WP_003856301.1;Name=WP_003856301.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=VMS06_RS07245;product=carbonate dehydratase;protein_id=WP_003856301.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 230968 231894 . + . ID=gene-VMS06_RS07250;Name=VMS06_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07250 NZ_JAVXZI010000004.1 Protein Homology CDS 230968 231894 . + 0 ID=cds-WP_003856300.1;Parent=gene-VMS06_RS07250;Dbxref=GenBank:WP_003856300.1;Name=WP_003856300.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414669.1;locus_tag=VMS06_RS07250;product=ABC transporter ATP-binding protein;protein_id=WP_003856300.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 231891 232661 . + . ID=gene-VMS06_RS07255;Name=VMS06_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07255 NZ_JAVXZI010000004.1 Protein Homology CDS 231891 232661 . + 0 ID=cds-WP_022647074.1;Parent=gene-VMS06_RS07255;Dbxref=GenBank:WP_022647074.1;Name=WP_022647074.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=VMS06_RS07255;product=ABC transporter permease;protein_id=WP_022647074.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 232767 233207 . + . ID=gene-VMS06_RS07260;Name=VMS06_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07260 NZ_JAVXZI010000004.1 Protein Homology CDS 232767 233207 . + 0 ID=cds-WP_022647075.1;Parent=gene-VMS06_RS07260;Dbxref=GenBank:WP_022647075.1;Name=WP_022647075.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006173772.1;locus_tag=VMS06_RS07260;product=PTS sugar transporter subunit IIA;protein_id=WP_022647075.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 233271 234518 . + . ID=gene-VMS06_RS07265;Name=VMS06_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07265 NZ_JAVXZI010000004.1 Protein Homology CDS 233271 234518 . + 0 ID=cds-WP_063148371.1;Parent=gene-VMS06_RS07265;Dbxref=GenBank:WP_063148371.1;Name=WP_063148371.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856293.1;locus_tag=VMS06_RS07265;product=polysaccharide deacetylase family protein;protein_id=WP_063148371.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 234522 235607 . - . ID=gene-VMS06_RS07270;Name=VMS06_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07270 NZ_JAVXZI010000004.1 Protein Homology CDS 234522 235607 . - 0 ID=cds-WP_050483641.1;Parent=gene-VMS06_RS07270;Dbxref=GenBank:WP_050483641.1;Name=WP_050483641.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.7;locus_tag=VMS06_RS07270;product=fimbrial protein;protein_id=WP_050483641.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 235628 236230 . - . ID=gene-VMS06_RS07275;Name=VMS06_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07275 NZ_JAVXZI010000004.1 Protein Homology CDS 235628 236230 . - 0 ID=cds-WP_022647078.1;Parent=gene-VMS06_RS07275;Dbxref=GenBank:WP_022647078.1;Name=WP_022647078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882592.1;locus_tag=VMS06_RS07275;product=fimbrial-like protein;protein_id=WP_022647078.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 236245 236808 . - . ID=gene-VMS06_RS07280;Name=VMS06_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07280 NZ_JAVXZI010000004.1 Protein Homology CDS 236245 236808 . - 0 ID=cds-WP_023299346.1;Parent=gene-VMS06_RS07280;Dbxref=GenBank:WP_023299346.1;Name=WP_023299346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016504756.1;locus_tag=VMS06_RS07280;product=fimbrial protein;protein_id=WP_023299346.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 236835 237404 . - . ID=gene-VMS06_RS07285;Name=VMS06_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07285 NZ_JAVXZI010000004.1 Protein Homology CDS 236835 237404 . - 0 ID=cds-WP_032625598.1;Parent=gene-VMS06_RS07285;Dbxref=GenBank:WP_032625598.1;Name=WP_032625598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572703.1;locus_tag=VMS06_RS07285;product=fimbrial protein;protein_id=WP_032625598.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 237443 240037 . - . ID=gene-VMS06_RS07290;Name=VMS06_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07290 NZ_JAVXZI010000004.1 Protein Homology CDS 237443 240037 . - 0 ID=cds-WP_063843930.1;Parent=gene-VMS06_RS07290;Dbxref=GenBank:WP_063843930.1;Name=WP_063843930.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017441536.1;locus_tag=VMS06_RS07290;product=outer membrane usher protein;protein_id=WP_063843930.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 240119 240862 . - . ID=gene-VMS06_RS07295;Name=VMS06_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07295 NZ_JAVXZI010000004.1 Protein Homology CDS 240119 240862 . - 0 ID=cds-WP_063843929.1;Parent=gene-VMS06_RS07295;Dbxref=GenBank:WP_063843929.1;Name=WP_063843929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006173753.1;locus_tag=VMS06_RS07295;product=fimbrial chaperone;protein_id=WP_063843929.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 240948 241559 . - . ID=gene-VMS06_RS07300;Name=VMS06_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07300 NZ_JAVXZI010000004.1 Protein Homology CDS 240948 241559 . - 0 ID=cds-WP_022647083.1;Parent=gene-VMS06_RS07300;Dbxref=GenBank:WP_022647083.1;Name=WP_022647083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694495.1;locus_tag=VMS06_RS07300;product=fimbrial protein;protein_id=WP_022647083.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 241884 242264 . - . ID=gene-VMS06_RS07305;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=VMS06_RS07305 NZ_JAVXZI010000004.1 Protein Homology CDS 241884 242264 . - 0 ID=cds-WP_022647084.1;Parent=gene-VMS06_RS07305;Dbxref=GenBank:WP_022647084.1;Name=WP_022647084.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=VMS06_RS07305;product=aspartate 1-decarboxylase;protein_id=WP_022647084.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 242296 243147 . - . ID=gene-VMS06_RS07310;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=VMS06_RS07310 NZ_JAVXZI010000004.1 Protein Homology CDS 242296 243147 . - 0 ID=cds-WP_063148374.1;Parent=gene-VMS06_RS07310;Dbxref=GenBank:WP_063148374.1;Name=WP_063148374.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856282.1;locus_tag=VMS06_RS07310;product=pantoate--beta-alanine ligase;protein_id=WP_063148374.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 243159 243950 . - . ID=gene-VMS06_RS07315;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=VMS06_RS07315 NZ_JAVXZI010000004.1 Protein Homology CDS 243159 243950 . - 0 ID=cds-WP_022647086.1;Parent=gene-VMS06_RS07315;Dbxref=GenBank:WP_022647086.1;Name=WP_022647086.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=VMS06_RS07315;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_022647086.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 244074 244553 . - . ID=gene-VMS06_RS07320;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=VMS06_RS07320 NZ_JAVXZI010000004.1 Protein Homology CDS 244074 244553 . - 0 ID=cds-WP_063148375.1;Parent=gene-VMS06_RS07320;Dbxref=GenBank:WP_063148375.1;Name=WP_063148375.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225169.1;locus_tag=VMS06_RS07320;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_063148375.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 244550 245947 . - . ID=gene-VMS06_RS07325;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=VMS06_RS07325 NZ_JAVXZI010000004.1 Protein Homology CDS 244550 245947 . - 0 ID=cds-WP_071892880.1;Parent=gene-VMS06_RS07325;Dbxref=GenBank:WP_071892880.1;Name=WP_071892880.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=VMS06_RS07325;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_071892880.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 245990 246880 . - . ID=gene-VMS06_RS07330;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=VMS06_RS07330 NZ_JAVXZI010000004.1 Protein Homology CDS 245990 246880 . - 0 ID=cds-WP_022647088.1;Parent=gene-VMS06_RS07330;Dbxref=GenBank:WP_022647088.1;Name=WP_022647088.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006173740.1;locus_tag=VMS06_RS07330;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_022647088.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 246940 247395 . - . ID=gene-VMS06_RS07335;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=VMS06_RS07335 NZ_JAVXZI010000004.1 Protein Homology CDS 246940 247395 . - 0 ID=cds-WP_001155232.1;Parent=gene-VMS06_RS07335;Dbxref=GenBank:WP_001155232.1;Name=WP_001155232.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=VMS06_RS07335;product=RNA polymerase-binding protein DksA;protein_id=WP_001155232.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 247572 248276 . - . ID=gene-VMS06_RS07340;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=VMS06_RS07340 NZ_JAVXZI010000004.1 Protein Homology CDS 247572 248276 . - 0 ID=cds-WP_023299353.1;Parent=gene-VMS06_RS07340;Dbxref=GenBank:WP_023299353.1;Name=WP_023299353.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459192.1;locus_tag=VMS06_RS07340;product=DNA/RNA nuclease SfsA;protein_id=WP_023299353.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 248266 248820 . - . ID=gene-VMS06_RS07345;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=VMS06_RS07345 NZ_JAVXZI010000004.1 Protein Homology CDS 248266 248820 . - 0 ID=cds-WP_063148376.1;Parent=gene-VMS06_RS07345;Dbxref=GenBank:WP_063148376.1;Name=WP_063148376.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006173664.1;locus_tag=VMS06_RS07345;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_063148376.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 248894 251323 . + . ID=gene-VMS06_RS07350;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=VMS06_RS07350 NZ_JAVXZI010000004.1 Protein Homology CDS 248894 251323 . + 0 ID=cds-WP_045623152.1;Parent=gene-VMS06_RS07350;Dbxref=GenBank:WP_045623152.1;Name=WP_045623152.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414690.4;locus_tag=VMS06_RS07350;product=ATP-dependent helicase HrpB;protein_id=WP_045623152.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 251521 254046 . + . ID=gene-VMS06_RS07355;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=VMS06_RS07355 NZ_JAVXZI010000004.1 Protein Homology CDS 251521 254046 . + 0 ID=cds-WP_058645852.1;Parent=gene-VMS06_RS07355;Dbxref=GenBank:WP_058645852.1;Name=WP_058645852.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501930.1;locus_tag=VMS06_RS07355;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_058645852.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq pseudogene 254284 256495 . + . ID=gene-VMS06_RS07360;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=pseudogene;locus_tag=VMS06_RS07360;pseudo=true NZ_JAVXZI010000004.1 Protein Homology CDS 254284 256495 . + 0 ID=cds-VMS06_RS07360;Parent=gene-VMS06_RS07360;Note=frameshifted;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204430.1;locus_tag=VMS06_RS07360;product=ferrichrome porin FhuA;pseudo=true;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 256546 257343 . + . ID=gene-VMS06_RS07365;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=VMS06_RS07365 NZ_JAVXZI010000004.1 Protein Homology CDS 256546 257343 . + 0 ID=cds-WP_022647093.1;Parent=gene-VMS06_RS07365;Dbxref=GenBank:WP_022647093.1;Name=WP_022647093.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856242.1;locus_tag=VMS06_RS07365;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_022647093.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 257343 258233 . + . ID=gene-VMS06_RS07370;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=VMS06_RS07370 NZ_JAVXZI010000004.1 Protein Homology CDS 257343 258233 . + 0 ID=cds-WP_063148378.1;Parent=gene-VMS06_RS07370;Dbxref=GenBank:WP_063148378.1;Name=WP_063148378.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501927.1;locus_tag=VMS06_RS07370;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_063148378.1;transl_table=11 NZ_JAVXZI010000004.1 RefSeq gene 258230 260212 . + . ID=gene-VMS06_RS07375;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=VMS06_RS07375 NZ_JAVXZI010000004.1 Protein Homology CDS 258230 260212 . + 0 ID=cds-WP_032625558.1;Parent=gene-VMS06_RS07375;Dbxref=GenBank:WP_032625558.1;Name=WP_032625558.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308184.1;locus_tag=VMS06_RS07375;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_032625558.1;transl_table=11 ##sequence-region NZ_JAVXZI010000005.1 1 237493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000005.1 RefSeq region 1 237493 . + . ID=NZ_JAVXZI010000005.1:1..237493;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000005.1 RefSeq gene 431 859 . + . ID=gene-VMS06_RS07380;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=VMS06_RS07380 NZ_JAVXZI010000005.1 Protein Homology CDS 431 859 . + 0 ID=cds-WP_003860434.1;Parent=gene-VMS06_RS07380;Dbxref=GenBank:WP_003860434.1;Name=WP_003860434.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=VMS06_RS07380;product=50S ribosomal protein L13;protein_id=WP_003860434.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 875 1267 . + . ID=gene-VMS06_RS07385;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=VMS06_RS07385 NZ_JAVXZI010000005.1 Protein Homology CDS 875 1267 . + 0 ID=cds-WP_003860436.1;Parent=gene-VMS06_RS07385;Dbxref=GenBank:WP_003860436.1;Name=WP_003860436.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=VMS06_RS07385;product=30S ribosomal protein S9;protein_id=WP_003860436.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 1575 2213 . + . ID=gene-VMS06_RS07390;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=VMS06_RS07390 NZ_JAVXZI010000005.1 Protein Homology CDS 1575 2213 . + 0 ID=cds-WP_003860438.1;Parent=gene-VMS06_RS07390;Dbxref=GenBank:WP_003860438.1;Name=WP_003860438.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=VMS06_RS07390;product=stringent starvation protein SspA;protein_id=WP_003860438.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 2219 2716 . + . ID=gene-VMS06_RS07395;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=VMS06_RS07395 NZ_JAVXZI010000005.1 Protein Homology CDS 2219 2716 . + 0 ID=cds-WP_032622090.1;Parent=gene-VMS06_RS07395;Dbxref=GenBank:WP_032622090.1;Name=WP_032622090.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229067.1;locus_tag=VMS06_RS07395;product=ClpXP protease specificity-enhancing factor;protein_id=WP_032622090.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 2986 3726 . + . ID=gene-VMS06_RS07400;Name=VMS06_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07400 NZ_JAVXZI010000005.1 Protein Homology CDS 2986 3726 . + 0 ID=cds-WP_022649551.1;Parent=gene-VMS06_RS07400;Dbxref=GenBank:WP_022649551.1;Name=WP_022649551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018280.7;locus_tag=VMS06_RS07400;product=DUF1120 domain-containing protein;protein_id=WP_022649551.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 3776 4522 . + . ID=gene-VMS06_RS07405;Name=VMS06_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07405 NZ_JAVXZI010000005.1 Protein Homology CDS 3776 4522 . + 0 ID=cds-WP_022649550.1;Parent=gene-VMS06_RS07405;Dbxref=GenBank:WP_022649550.1;Name=WP_022649550.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018280.7;locus_tag=VMS06_RS07405;product=DUF1120 domain-containing protein;protein_id=WP_022649550.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 4670 5341 . + . ID=gene-VMS06_RS07410;Name=VMS06_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07410 NZ_JAVXZI010000005.1 Protein Homology CDS 4670 5341 . + 0 ID=cds-WP_022649549.1;Parent=gene-VMS06_RS07410;Dbxref=GenBank:WP_022649549.1;Name=WP_022649549.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004854613.1;locus_tag=VMS06_RS07410;product=fimbria/pilus chaperone family protein;protein_id=WP_022649549.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 5366 7753 . + . ID=gene-VMS06_RS07415;Name=VMS06_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07415 NZ_JAVXZI010000005.1 Protein Homology CDS 5366 7753 . + 0 ID=cds-WP_045308046.1;Parent=gene-VMS06_RS07415;Dbxref=GenBank:WP_045308046.1;Name=WP_045308046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115863.1;locus_tag=VMS06_RS07415;product=fimbrial biogenesis usher protein;protein_id=WP_045308046.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 7750 8280 . + . ID=gene-VMS06_RS07420;Name=VMS06_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07420 NZ_JAVXZI010000005.1 GeneMarkS-2+ CDS 7750 8280 . + 0 ID=cds-WP_032626444.1;Parent=gene-VMS06_RS07420;Dbxref=GenBank:WP_032626444.1;Name=WP_032626444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS07420;product=DUF1120 domain-containing protein;protein_id=WP_032626444.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 8277 8981 . + . ID=gene-VMS06_RS07425;Name=VMS06_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07425 NZ_JAVXZI010000005.1 Protein Homology CDS 8277 8981 . + 0 ID=cds-WP_022649546.1;Parent=gene-VMS06_RS07425;Dbxref=GenBank:WP_022649546.1;Name=WP_022649546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651880.1;locus_tag=VMS06_RS07425;product=DUF1120 domain-containing protein;protein_id=WP_022649546.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 9131 10411 . - . ID=gene-VMS06_RS07430;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=VMS06_RS07430 NZ_JAVXZI010000005.1 Protein Homology CDS 9131 10411 . - 0 ID=cds-WP_063147841.1;Parent=gene-VMS06_RS07430;Dbxref=GenBank:WP_063147841.1;Name=WP_063147841.1;gbkey=CDS;gene=codA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462244.1;locus_tag=VMS06_RS07430;product=cytosine/isoguanine deaminase;protein_id=WP_063147841.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 10401 11651 . - . ID=gene-VMS06_RS07435;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=VMS06_RS07435 NZ_JAVXZI010000005.1 Protein Homology CDS 10401 11651 . - 0 ID=cds-WP_038416800.1;Parent=gene-VMS06_RS07435;Dbxref=GenBank:WP_038416800.1;Name=WP_038416800.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154697.1;locus_tag=VMS06_RS07435;product=cytosine permease;protein_id=WP_038416800.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 11839 13257 . - . ID=gene-VMS06_RS07440;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=VMS06_RS07440 NZ_JAVXZI010000005.1 Protein Homology CDS 11839 13257 . - 0 ID=cds-WP_023298729.1;Parent=gene-VMS06_RS07440;Dbxref=GenBank:WP_023298729.1;Name=WP_023298729.1;gbkey=CDS;gene=gltD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=VMS06_RS07440;product=glutamate synthase subunit GltD;protein_id=WP_023298729.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 13267 17727 . - . ID=gene-VMS06_RS07445;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=VMS06_RS07445 NZ_JAVXZI010000005.1 Protein Homology CDS 13267 17727 . - 0 ID=cds-WP_022649542.1;Parent=gene-VMS06_RS07445;Dbxref=GenBank:WP_022649542.1;Name=WP_022649542.1;Ontology_term=GO:0008152,GO:0097054,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA,L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=VMS06_RS07445;product=glutamate synthase large subunit;protein_id=WP_022649542.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 18415 19356 . + . ID=gene-VMS06_RS07450;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=VMS06_RS07450 NZ_JAVXZI010000005.1 Protein Homology CDS 18415 19356 . + 0 ID=cds-WP_100148649.1;Parent=gene-VMS06_RS07450;Dbxref=GenBank:WP_100148649.1;Name=WP_100148649.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312117.1;locus_tag=VMS06_RS07450;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_100148649.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 19336 20838 . - . ID=gene-VMS06_RS07455;Name=VMS06_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07455 NZ_JAVXZI010000005.1 Protein Homology CDS 19336 20838 . - 0 ID=cds-WP_063147843.1;Parent=gene-VMS06_RS07455;Dbxref=GenBank:WP_063147843.1;Name=WP_063147843.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418684.1;locus_tag=VMS06_RS07455;product=helicase HerA-like C-terminal domain-containing protein;protein_id=WP_063147843.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 20976 22616 . + . ID=gene-VMS06_RS07460;Name=VMS06_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07460 NZ_JAVXZI010000005.1 Protein Homology CDS 20976 22616 . + 0 ID=cds-WP_063147844.1;Parent=gene-VMS06_RS07460;Dbxref=GenBank:WP_063147844.1;Name=WP_063147844.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502819.1;locus_tag=VMS06_RS07460;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_063147844.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 22660 23679 . - . ID=gene-VMS06_RS07465;Name=ahr;gbkey=Gene;gene=ahr;gene_biotype=protein_coding;locus_tag=VMS06_RS07465 NZ_JAVXZI010000005.1 Protein Homology CDS 22660 23679 . - 0 ID=cds-WP_022649538.1;Parent=gene-VMS06_RS07465;Dbxref=GenBank:WP_022649538.1;Name=WP_022649538.1;Ontology_term=GO:0006631,GO:0008106,GO:0016616;gbkey=CDS;gene=ahr;go_function=alcohol dehydrogenase (NADP+) activity|0008106||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463346.1;locus_tag=VMS06_RS07465;product=NADPH-dependent aldehyde reductase Ahr;protein_id=WP_022649538.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 23763 24266 . - . ID=gene-VMS06_RS07470;Name=VMS06_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07470 NZ_JAVXZI010000005.1 Protein Homology CDS 23763 24266 . - 0 ID=cds-WP_003861887.1;Parent=gene-VMS06_RS07470;Dbxref=GenBank:WP_003861887.1;Name=WP_003861887.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436090.1;locus_tag=VMS06_RS07470;product=GNAT family N-acetyltransferase;protein_id=WP_003861887.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 24390 27245 . - . ID=gene-VMS06_RS07475;Name=VMS06_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07475 NZ_JAVXZI010000005.1 Protein Homology CDS 24390 27245 . - 0 ID=cds-WP_063147845.1;Parent=gene-VMS06_RS07475;Dbxref=GenBank:WP_063147845.1;Name=WP_063147845.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=VMS06_RS07475;product=valine--tRNA ligase;protein_id=WP_063147845.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 27245 27688 . - . ID=gene-VMS06_RS07480;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=VMS06_RS07480 NZ_JAVXZI010000005.1 Protein Homology CDS 27245 27688 . - 0 ID=cds-WP_003861884.1;Parent=gene-VMS06_RS07480;Dbxref=GenBank:WP_003861884.1;Name=WP_003861884.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=VMS06_RS07480;product=DNA polymerase III subunit chi;protein_id=WP_003861884.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 27807 29318 . - . ID=gene-VMS06_RS07485;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=VMS06_RS07485 NZ_JAVXZI010000005.1 Protein Homology CDS 27807 29318 . - 0 ID=cds-WP_003861882.1;Parent=gene-VMS06_RS07485;Dbxref=GenBank:WP_003861882.1;Name=WP_003861882.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=VMS06_RS07485;product=leucyl aminopeptidase;protein_id=WP_003861882.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 29584 30684 . + . ID=gene-VMS06_RS07490;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=VMS06_RS07490 NZ_JAVXZI010000005.1 Protein Homology CDS 29584 30684 . + 0 ID=cds-WP_000584142.1;Parent=gene-VMS06_RS07490;Dbxref=GenBank:WP_000584142.1;Name=WP_000584142.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463339.1;locus_tag=VMS06_RS07490;product=LPS export ABC transporter permease LptF;protein_id=WP_000584142.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 30684 31766 . + . ID=gene-VMS06_RS07495;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=VMS06_RS07495 NZ_JAVXZI010000005.1 Protein Homology CDS 30684 31766 . + 0 ID=cds-WP_022649534.1;Parent=gene-VMS06_RS07495;Dbxref=GenBank:WP_022649534.1;Name=WP_022649534.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313266.2;locus_tag=VMS06_RS07495;product=LPS export ABC transporter permease LptG;protein_id=WP_022649534.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 31904 34237 . + . ID=gene-VMS06_RS07500;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=VMS06_RS07500 NZ_JAVXZI010000005.1 Protein Homology CDS 31904 34237 . + 0 ID=cds-WP_032626426.1;Parent=gene-VMS06_RS07500;Dbxref=GenBank:WP_032626426.1;Name=WP_032626426.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883524.1;locus_tag=VMS06_RS07500;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_032626426.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 34470 35123 . + . ID=gene-VMS06_RS07505;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=VMS06_RS07505 NZ_JAVXZI010000005.1 Protein Homology CDS 34470 35123 . + 0 ID=cds-WP_038416794.1;Parent=gene-VMS06_RS07505;Dbxref=GenBank:WP_038416794.1;Name=WP_038416794.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312115.2;locus_tag=VMS06_RS07505;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_038416794.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 35120 35845 . + . ID=gene-VMS06_RS07510;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=VMS06_RS07510 NZ_JAVXZI010000005.1 Protein Homology CDS 35120 35845 . + 0 ID=cds-WP_063843658.1;Parent=gene-VMS06_RS07510;Dbxref=GenBank:WP_063843658.1;Name=WP_063843658.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501440.1;locus_tag=VMS06_RS07510;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_063843658.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 35885 36157 . - . ID=gene-VMS06_RS07515;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=VMS06_RS07515 NZ_JAVXZI010000005.1 Protein Homology CDS 35885 36157 . - 0 ID=cds-WP_003861872.1;Parent=gene-VMS06_RS07515;Dbxref=GenBank:WP_003861872.1;Name=WP_003861872.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=VMS06_RS07515;product=PTS phosphocarrier protein NPr;protein_id=WP_003861872.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 36154 37008 . - . ID=gene-VMS06_RS07520;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=VMS06_RS07520 NZ_JAVXZI010000005.1 Protein Homology CDS 36154 37008 . - 0 ID=cds-WP_003861870.1;Parent=gene-VMS06_RS07520;Dbxref=GenBank:WP_003861870.1;Name=WP_003861870.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462233.1;locus_tag=VMS06_RS07520;product=RNase adapter RapZ;protein_id=WP_003861870.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 37054 37545 . - . ID=gene-VMS06_RS07525;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=VMS06_RS07525 NZ_JAVXZI010000005.1 Protein Homology CDS 37054 37545 . - 0 ID=cds-WP_003861869.1;Parent=gene-VMS06_RS07525;Dbxref=GenBank:WP_003861869.1;Name=WP_003861869.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462232.1;locus_tag=VMS06_RS07525;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_003861869.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 37628 37915 . - . ID=gene-VMS06_RS07530;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=VMS06_RS07530 NZ_JAVXZI010000005.1 Protein Homology CDS 37628 37915 . - 0 ID=cds-WP_014171818.1;Parent=gene-VMS06_RS07530;Dbxref=GenBank:WP_014171818.1;Name=WP_014171818.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462231.1;locus_tag=VMS06_RS07530;product=ribosome hibernation promoting factor;protein_id=WP_014171818.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 37938 39371 . - . ID=gene-VMS06_RS07535;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=VMS06_RS07535 NZ_JAVXZI010000005.1 Protein Homology CDS 37938 39371 . - 0 ID=cds-WP_022649530.1;Parent=gene-VMS06_RS07535;Dbxref=GenBank:WP_022649530.1;Name=WP_022649530.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229051.1;locus_tag=VMS06_RS07535;product=RNA polymerase factor sigma-54;protein_id=WP_022649530.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 39419 40144 . - . ID=gene-VMS06_RS07540;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=VMS06_RS07540 NZ_JAVXZI010000005.1 Protein Homology CDS 39419 40144 . - 0 ID=cds-WP_003861862.1;Parent=gene-VMS06_RS07540;Dbxref=GenBank:WP_003861862.1;Name=WP_003861862.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=VMS06_RS07540;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_003861862.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 40151 40705 . - . ID=gene-VMS06_RS07545;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=VMS06_RS07545 NZ_JAVXZI010000005.1 Protein Homology CDS 40151 40705 . - 0 ID=cds-WP_006812136.1;Parent=gene-VMS06_RS07545;Dbxref=GenBank:WP_006812136.1;Name=WP_006812136.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462228.1;locus_tag=VMS06_RS07545;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_006812136.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 40674 41249 . - . ID=gene-VMS06_RS07550;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=VMS06_RS07550 NZ_JAVXZI010000005.1 Protein Homology CDS 40674 41249 . - 0 ID=cds-WP_022649529.1;Parent=gene-VMS06_RS07550;Dbxref=GenBank:WP_022649529.1;Name=WP_022649529.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462227.1;locus_tag=VMS06_RS07550;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_022649529.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 41246 41812 . - . ID=gene-VMS06_RS07555;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=VMS06_RS07555 NZ_JAVXZI010000005.1 Protein Homology CDS 41246 41812 . - 0 ID=cds-WP_045622106.1;Parent=gene-VMS06_RS07555;Dbxref=GenBank:WP_045622106.1;Name=WP_045622106.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708997.1;locus_tag=VMS06_RS07555;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_045622106.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 41827 42813 . - . ID=gene-VMS06_RS07560;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=VMS06_RS07560 NZ_JAVXZI010000005.1 Protein Homology CDS 41827 42813 . - 0 ID=cds-WP_003861853.1;Parent=gene-VMS06_RS07560;Dbxref=GenBank:WP_003861853.1;Name=WP_003861853.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462225.1;locus_tag=VMS06_RS07560;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_003861853.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 42827 43804 . - . ID=gene-VMS06_RS07565;Name=VMS06_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07565 NZ_JAVXZI010000005.1 Protein Homology CDS 42827 43804 . - 0 ID=cds-WP_003861852.1;Parent=gene-VMS06_RS07565;Dbxref=GenBank:WP_003861852.1;Name=WP_003861852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462224.1;locus_tag=VMS06_RS07565;product=calcium/sodium antiporter;protein_id=WP_003861852.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 44032 44844 . + . ID=gene-VMS06_RS07570;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=VMS06_RS07570 NZ_JAVXZI010000005.1 Protein Homology CDS 44032 44844 . + 0 ID=cds-WP_022649527.1;Parent=gene-VMS06_RS07570;Dbxref=GenBank:WP_022649527.1;Name=WP_022649527.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883529.1;locus_tag=VMS06_RS07570;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_022649527.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 44852 45634 . + . ID=gene-VMS06_RS07575;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=VMS06_RS07575 NZ_JAVXZI010000005.1 Protein Homology CDS 44852 45634 . + 0 ID=cds-WP_003861848.1;Parent=gene-VMS06_RS07575;Dbxref=GenBank:WP_003861848.1;Name=WP_003861848.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=VMS06_RS07575;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_003861848.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 45639 46187 . + . ID=gene-VMS06_RS07580;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=VMS06_RS07580 NZ_JAVXZI010000005.1 Protein Homology CDS 45639 46187 . + 0 ID=cds-WP_022649526.1;Parent=gene-VMS06_RS07580;Dbxref=GenBank:WP_022649526.1;Name=WP_022649526.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812131.1;locus_tag=VMS06_RS07580;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_022649526.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 46206 46841 . + . ID=gene-VMS06_RS07585;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=VMS06_RS07585 NZ_JAVXZI010000005.1 Protein Homology CDS 46206 46841 . + 0 ID=cds-WP_006812130.1;Parent=gene-VMS06_RS07585;Dbxref=GenBank:WP_006812130.1;Name=WP_006812130.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462220.1;locus_tag=VMS06_RS07585;product=phospholipid-binding protein MlaC;protein_id=WP_006812130.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 46841 47134 . + . ID=gene-VMS06_RS07590;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=VMS06_RS07590 NZ_JAVXZI010000005.1 Protein Homology CDS 46841 47134 . + 0 ID=cds-WP_022649525.1;Parent=gene-VMS06_RS07590;Dbxref=GenBank:WP_022649525.1;Name=WP_022649525.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812129.1;locus_tag=VMS06_RS07590;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_022649525.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 47261 47515 . + . ID=gene-VMS06_RS07595;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=VMS06_RS07595 NZ_JAVXZI010000005.1 Protein Homology CDS 47261 47515 . + 0 ID=cds-WP_003861840.1;Parent=gene-VMS06_RS07595;Dbxref=GenBank:WP_003861840.1;Name=WP_003861840.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229039.1;locus_tag=VMS06_RS07595;product=BolA family iron metabolism protein IbaG;protein_id=WP_003861840.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 47566 48825 . + . ID=gene-VMS06_RS07600;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=VMS06_RS07600 NZ_JAVXZI010000005.1 Protein Homology CDS 47566 48825 . + 0 ID=cds-WP_006812128.1;Parent=gene-VMS06_RS07600;Dbxref=GenBank:WP_006812128.1;Name=WP_006812128.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868122.1;locus_tag=VMS06_RS07600;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_006812128.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 48889 49176 . - . ID=gene-VMS06_RS07605;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=VMS06_RS07605 NZ_JAVXZI010000005.1 Protein Homology CDS 48889 49176 . - 0 ID=cds-WP_022649524.1;Parent=gene-VMS06_RS07605;Dbxref=GenBank:WP_022649524.1;Name=WP_022649524.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861835.1;locus_tag=VMS06_RS07605;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_022649524.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 49406 50377 . - . ID=gene-VMS06_RS07610;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=VMS06_RS07610 NZ_JAVXZI010000005.1 Protein Homology CDS 49406 50377 . - 0 ID=cds-WP_006812126.1;Parent=gene-VMS06_RS07610;Dbxref=GenBank:WP_006812126.1;Name=WP_006812126.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417654.1;locus_tag=VMS06_RS07610;product=octaprenyl diphosphate synthase;protein_id=WP_006812126.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 50635 50946 . + . ID=gene-VMS06_RS07615;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=VMS06_RS07615 NZ_JAVXZI010000005.1 Protein Homology CDS 50635 50946 . + 0 ID=cds-WP_003025032.1;Parent=gene-VMS06_RS07615;Dbxref=GenBank:WP_003025032.1;Name=WP_003025032.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=VMS06_RS07615;product=50S ribosomal protein L21;protein_id=WP_003025032.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 50966 51223 . + . ID=gene-VMS06_RS07620;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=VMS06_RS07620 NZ_JAVXZI010000005.1 Protein Homology CDS 50966 51223 . + 0 ID=cds-WP_003861831.1;Parent=gene-VMS06_RS07620;Dbxref=GenBank:WP_003861831.1;Name=WP_003861831.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=VMS06_RS07620;product=50S ribosomal protein L27;protein_id=WP_003861831.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 51319 52284 . + . ID=gene-VMS06_RS07625;Name=VMS06_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07625 NZ_JAVXZI010000005.1 Protein Homology CDS 51319 52284 . + 0 ID=cds-WP_003861826.1;Parent=gene-VMS06_RS07625;Dbxref=GenBank:WP_003861826.1;Name=WP_003861826.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=VMS06_RS07625;product=DMT family transporter;protein_id=WP_003861826.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 52300 53475 . + . ID=gene-VMS06_RS07630;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=VMS06_RS07630 NZ_JAVXZI010000005.1 Protein Homology CDS 52300 53475 . + 0 ID=cds-WP_003861823.1;Parent=gene-VMS06_RS07630;Dbxref=GenBank:WP_003861823.1;Name=WP_003861823.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812124.1;locus_tag=VMS06_RS07630;product=Obg family GTPase CgtA;protein_id=WP_003861823.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 53508 54551 . - . ID=gene-VMS06_RS07635;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=VMS06_RS07635 NZ_JAVXZI010000005.1 Protein Homology CDS 53508 54551 . - 0 ID=cds-WP_058677035.1;Parent=gene-VMS06_RS07635;Dbxref=GenBank:WP_058677035.1;Name=WP_058677035.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812123.1;locus_tag=VMS06_RS07635;product=two-component system sensor histidine kinase PmrB;protein_id=WP_058677035.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 54548 55210 . - . ID=gene-VMS06_RS07640;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=VMS06_RS07640 NZ_JAVXZI010000005.1 Protein Homology CDS 54548 55210 . - 0 ID=cds-WP_063147846.1;Parent=gene-VMS06_RS07640;Dbxref=GenBank:WP_063147846.1;Name=WP_063147846.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960599.1;locus_tag=VMS06_RS07640;product=two-component system response regulator PmrA;protein_id=WP_063147846.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 55213 56646 . - . ID=gene-VMS06_RS07645;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=VMS06_RS07645 NZ_JAVXZI010000005.1 Protein Homology CDS 55213 56646 . - 0 ID=cds-WP_003861817.1;Parent=gene-VMS06_RS07645;Dbxref=GenBank:WP_003861817.1;Name=WP_003861817.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=VMS06_RS07645;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_003861817.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 56875 57351 . + . ID=gene-VMS06_RS07650;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=VMS06_RS07650 NZ_JAVXZI010000005.1 Protein Homology CDS 56875 57351 . + 0 ID=cds-WP_023298719.1;Parent=gene-VMS06_RS07650;Dbxref=GenBank:WP_023298719.1;Name=WP_023298719.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=VMS06_RS07650;product=transcription elongation factor GreA;protein_id=WP_023298719.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 57503 57796 . - . ID=gene-VMS06_RS07655;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=VMS06_RS07655 NZ_JAVXZI010000005.1 Protein Homology CDS 57503 57796 . - 0 ID=cds-WP_003861814.1;Parent=gene-VMS06_RS07655;Dbxref=GenBank:WP_003861814.1;Name=WP_003861814.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=VMS06_RS07655;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_003861814.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 57924 58550 . + . ID=gene-VMS06_RS07660;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=VMS06_RS07660 NZ_JAVXZI010000005.1 Protein Homology CDS 57924 58550 . + 0 ID=cds-WP_003861812.1;Parent=gene-VMS06_RS07660;Dbxref=GenBank:WP_003861812.1;Name=WP_003861812.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462208.1;locus_tag=VMS06_RS07660;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_003861812.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 58653 60587 . + . ID=gene-VMS06_RS07665;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=VMS06_RS07665 NZ_JAVXZI010000005.1 Protein Homology CDS 58653 60587 . + 0 ID=cds-WP_003861810.1;Parent=gene-VMS06_RS07665;Dbxref=GenBank:WP_003861810.1;Name=WP_003861810.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=VMS06_RS07665;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_003861810.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 60686 61534 . + . ID=gene-VMS06_RS07670;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=VMS06_RS07670 NZ_JAVXZI010000005.1 Protein Homology CDS 60686 61534 . + 0 ID=cds-WP_022649520.1;Parent=gene-VMS06_RS07670;Dbxref=GenBank:WP_022649520.1;Name=WP_022649520.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312083.2;locus_tag=VMS06_RS07670;product=dihydropteroate synthase;protein_id=WP_022649520.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 61527 62864 . + . ID=gene-VMS06_RS07675;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=VMS06_RS07675 NZ_JAVXZI010000005.1 Protein Homology CDS 61527 62864 . + 0 ID=cds-WP_003861804.1;Parent=gene-VMS06_RS07675;Dbxref=GenBank:WP_003861804.1;Name=WP_003861804.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861804.1;locus_tag=VMS06_RS07675;product=phosphoglucosamine mutase;protein_id=WP_003861804.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 63087 63419 . + . ID=gene-VMS06_RS07680;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=VMS06_RS07680 NZ_JAVXZI010000005.1 Protein Homology CDS 63087 63419 . + 0 ID=cds-WP_003861803.1;Parent=gene-VMS06_RS07680;Dbxref=GenBank:WP_003861803.1;Name=WP_003861803.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462204.1;locus_tag=VMS06_RS07680;product=preprotein translocase subunit SecG;protein_id=WP_003861803.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 63429 63515 . + . ID=gene-VMS06_RS07685;Name=VMS06_RS07685;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS07685 NZ_JAVXZI010000005.1 tRNAscan-SE tRNA 63429 63515 . + . ID=rna-VMS06_RS07685;Parent=gene-VMS06_RS07685;anticodon=(pos:63463..63465);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS07685;product=tRNA-Leu NZ_JAVXZI010000005.1 tRNAscan-SE exon 63429 63515 . + . ID=exon-VMS06_RS07685-1;Parent=rna-VMS06_RS07685;anticodon=(pos:63463..63465);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS07685;product=tRNA-Leu NZ_JAVXZI010000005.1 RefSeq gene 63703 65049 . - . ID=gene-VMS06_RS07690;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=VMS06_RS07690 NZ_JAVXZI010000005.1 Protein Homology CDS 63703 65049 . - 0 ID=cds-WP_022649518.1;Parent=gene-VMS06_RS07690;Dbxref=GenBank:WP_022649518.1;Name=WP_022649518.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960591.1;locus_tag=VMS06_RS07690;product=argininosuccinate synthase;protein_id=WP_022649518.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 65337 65413 . + . ID=gene-VMS06_RS07695;Name=VMS06_RS07695;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS07695 NZ_JAVXZI010000005.1 tRNAscan-SE tRNA 65337 65413 . + . ID=rna-VMS06_RS07695;Parent=gene-VMS06_RS07695;anticodon=(pos:65371..65373);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS07695;product=tRNA-Met NZ_JAVXZI010000005.1 tRNAscan-SE exon 65337 65413 . + . ID=exon-VMS06_RS07695-1;Parent=rna-VMS06_RS07695;anticodon=(pos:65371..65373);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS07695;product=tRNA-Met NZ_JAVXZI010000005.1 RefSeq gene 65621 66073 . + . ID=gene-VMS06_RS07700;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=VMS06_RS07700 NZ_JAVXZI010000005.1 Protein Homology CDS 65621 66073 . + 0 ID=cds-WP_014833432.1;Parent=gene-VMS06_RS07700;Dbxref=GenBank:WP_014833432.1;Name=WP_014833432.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=VMS06_RS07700;product=ribosome maturation factor RimP;protein_id=WP_014833432.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 66102 67604 . + . ID=gene-VMS06_RS07705;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=VMS06_RS07705 NZ_JAVXZI010000005.1 Protein Homology CDS 66102 67604 . + 0 ID=cds-WP_003861798.1;Parent=gene-VMS06_RS07705;Dbxref=GenBank:WP_003861798.1;Name=WP_003861798.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=VMS06_RS07705;product=transcription termination factor NusA;protein_id=WP_003861798.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 67629 70316 . + . ID=gene-VMS06_RS07710;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=VMS06_RS07710 NZ_JAVXZI010000005.1 Protein Homology CDS 67629 70316 . + 0 ID=cds-WP_022649517.1;Parent=gene-VMS06_RS07710;Dbxref=GenBank:WP_022649517.1;Name=WP_022649517.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098916.1;locus_tag=VMS06_RS07710;product=translation initiation factor IF-2;protein_id=WP_022649517.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 70423 70827 . + . ID=gene-VMS06_RS07715;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=VMS06_RS07715 NZ_JAVXZI010000005.1 Protein Homology CDS 70423 70827 . + 0 ID=cds-WP_003861793.1;Parent=gene-VMS06_RS07715;Dbxref=GenBank:WP_003861793.1;Name=WP_003861793.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=VMS06_RS07715;product=30S ribosome-binding factor RbfA;protein_id=WP_003861793.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 70827 71777 . + . ID=gene-VMS06_RS07720;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=VMS06_RS07720 NZ_JAVXZI010000005.1 Protein Homology CDS 70827 71777 . + 0 ID=cds-WP_023298718.1;Parent=gene-VMS06_RS07720;Dbxref=GenBank:WP_023298718.1;Name=WP_023298718.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171782.1;locus_tag=VMS06_RS07720;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_023298718.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 71932 72201 . + . ID=gene-VMS06_RS07725;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=VMS06_RS07725 NZ_JAVXZI010000005.1 Protein Homology CDS 71932 72201 . + 0 ID=cds-WP_003861789.1;Parent=gene-VMS06_RS07725;Dbxref=GenBank:WP_003861789.1;Name=WP_003861789.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=VMS06_RS07725;product=30S ribosomal protein S15;protein_id=WP_003861789.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 72444 74582 . + . ID=gene-VMS06_RS07730;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=VMS06_RS07730 NZ_JAVXZI010000005.1 Protein Homology CDS 72444 74582 . + 0 ID=cds-WP_022649515.1;Parent=gene-VMS06_RS07730;Dbxref=GenBank:WP_022649515.1;Name=WP_022649515.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651902.1;locus_tag=VMS06_RS07730;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_022649515.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 74693 75577 . + . ID=gene-VMS06_RS07735;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=VMS06_RS07735 NZ_JAVXZI010000005.1 Protein Homology CDS 74693 75577 . + 0 ID=cds-WP_003861782.1;Parent=gene-VMS06_RS07735;Dbxref=GenBank:WP_003861782.1;Name=WP_003861782.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=VMS06_RS07735;product=lipoprotein NlpI;protein_id=WP_003861782.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 75685 75765 . + . ID=gene-VMS06_RS07740;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=VMS06_RS07740 NZ_JAVXZI010000005.1 Protein Homology CDS 75685 75765 . + 0 ID=cds-WP_097397692.1;Parent=gene-VMS06_RS07740;Dbxref=GenBank:WP_097397692.1;Name=WP_097397692.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=VMS06_RS07740;product=protein YrbN;protein_id=WP_097397692.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 75758 77653 . + . ID=gene-VMS06_RS07745;Name=VMS06_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07745 NZ_JAVXZI010000005.1 Protein Homology CDS 75758 77653 . + 0 ID=cds-WP_022649514.1;Parent=gene-VMS06_RS07745;Dbxref=GenBank:WP_022649514.1;Name=WP_022649514.1;Ontology_term=GO:0000027,GO:0003724,GO:0005524;gbkey=CDS;go_function=RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098911.1;locus_tag=VMS06_RS07745;product=DEAD/DEAH family ATP-dependent RNA helicase;protein_id=WP_022649514.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 77796 79040 . + . ID=gene-VMS06_RS07750;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=VMS06_RS07750 NZ_JAVXZI010000005.1 Protein Homology CDS 77796 79040 . + 0 ID=cds-WP_022649513.1;Parent=gene-VMS06_RS07750;Dbxref=GenBank:WP_022649513.1;Name=WP_022649513.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462192.1;locus_tag=VMS06_RS07750;product=tryptophan permease;protein_id=WP_022649513.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 79125 80132 . - . ID=gene-VMS06_RS07755;Name=VMS06_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07755 NZ_JAVXZI010000005.1 Protein Homology CDS 79125 80132 . - 0 ID=cds-WP_022649512.1;Parent=gene-VMS06_RS07755;Dbxref=GenBank:WP_022649512.1;Name=WP_022649512.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229005.1;locus_tag=VMS06_RS07755;product=luciferase-like monooxygenase;protein_id=WP_022649512.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 80210 81088 . - . ID=gene-VMS06_RS07760;Name=VMS06_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07760 NZ_JAVXZI010000005.1 Protein Homology CDS 80210 81088 . - 0 ID=cds-WP_063147847.1;Parent=gene-VMS06_RS07760;Dbxref=GenBank:WP_063147847.1;Name=WP_063147847.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883542.1;locus_tag=VMS06_RS07760;product=U32 family peptidase;protein_id=WP_063147847.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 81096 82091 . - . ID=gene-VMS06_RS07765;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=VMS06_RS07765 NZ_JAVXZI010000005.1 Protein Homology CDS 81096 82091 . - 0 ID=cds-WP_003861773.1;Parent=gene-VMS06_RS07765;Dbxref=GenBank:WP_003861773.1;Name=WP_003861773.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=VMS06_RS07765;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_003861773.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 82313 82837 . + . ID=gene-VMS06_RS07770;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=VMS06_RS07770 NZ_JAVXZI010000005.1 Protein Homology CDS 82313 82837 . + 0 ID=cds-WP_003861771.1;Parent=gene-VMS06_RS07770;Dbxref=GenBank:WP_003861771.1;Name=WP_003861771.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312065.1;locus_tag=VMS06_RS07770;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_003861771.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 82831 83334 . + . ID=gene-VMS06_RS07775;Name=VMS06_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07775 NZ_JAVXZI010000005.1 Protein Homology CDS 82831 83334 . + 0 ID=cds-WP_022649509.1;Parent=gene-VMS06_RS07775;Dbxref=GenBank:WP_022649509.1;Name=WP_022649509.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462185.1;locus_tag=VMS06_RS07775;product=GNAT family N-acetyltransferase;protein_id=WP_022649509.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 83321 83650 . - . ID=gene-VMS06_RS07780;Name=VMS06_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07780 NZ_JAVXZI010000005.1 Protein Homology CDS 83321 83650 . - 0 ID=cds-WP_003861768.1;Parent=gene-VMS06_RS07780;Dbxref=GenBank:WP_003861768.1;Name=WP_003861768.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861768.1;locus_tag=VMS06_RS07780;product=GIY-YIG nuclease family protein;protein_id=WP_003861768.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 83665 84099 . + . ID=gene-VMS06_RS07785;Name=VMS06_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07785 NZ_JAVXZI010000005.1 Protein Homology CDS 83665 84099 . + 0 ID=cds-WP_022649508.1;Parent=gene-VMS06_RS07785;Dbxref=GenBank:WP_022649508.1;Name=WP_022649508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417623.1;locus_tag=VMS06_RS07785;product=YhbP family protein;protein_id=WP_022649508.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 84079 84597 . - . ID=gene-VMS06_RS07790;Name=VMS06_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07790 NZ_JAVXZI010000005.1 Protein Homology CDS 84079 84597 . - 0 ID=cds-WP_015571965.1;Parent=gene-VMS06_RS07790;Dbxref=GenBank:WP_015571965.1;Name=WP_015571965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417622.2;locus_tag=VMS06_RS07790;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_015571965.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 84726 85370 . + . ID=gene-VMS06_RS07795;Name=VMS06_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07795 NZ_JAVXZI010000005.1 Protein Homology CDS 84726 85370 . + 0 ID=cds-WP_022649507.1;Parent=gene-VMS06_RS07795;Dbxref=GenBank:WP_022649507.1;Name=WP_022649507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178743.1;locus_tag=VMS06_RS07795;product=NAD(P)H-binding protein;protein_id=WP_022649507.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 85411 86448 . + . ID=gene-VMS06_RS07800;Name=VMS06_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07800 NZ_JAVXZI010000005.1 Protein Homology CDS 85411 86448 . + 0 ID=cds-WP_023307055.1;Parent=gene-VMS06_RS07800;Dbxref=GenBank:WP_023307055.1;Name=WP_023307055.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960572.1;locus_tag=VMS06_RS07800;product=permease;protein_id=WP_023307055.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 86499 87074 . - . ID=gene-VMS06_RS07805;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=VMS06_RS07805 NZ_JAVXZI010000005.1 Protein Homology CDS 86499 87074 . - 0 ID=cds-WP_022649505.1;Parent=gene-VMS06_RS07805;Dbxref=GenBank:WP_022649505.1;Name=WP_022649505.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462180.1;locus_tag=VMS06_RS07805;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_022649505.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 87084 87674 . - . ID=gene-VMS06_RS07810;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=VMS06_RS07810 NZ_JAVXZI010000005.1 Protein Homology CDS 87084 87674 . - 0 ID=cds-WP_003861754.1;Parent=gene-VMS06_RS07810;Dbxref=GenBank:WP_003861754.1;Name=WP_003861754.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=VMS06_RS07810;product=DnaA initiator-associating protein DiaA;protein_id=WP_003861754.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 87696 88091 . - . ID=gene-VMS06_RS07815;Name=VMS06_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07815 NZ_JAVXZI010000005.1 Protein Homology CDS 87696 88091 . - 0 ID=cds-WP_022649504.1;Parent=gene-VMS06_RS07815;Dbxref=GenBank:WP_022649504.1;Name=WP_022649504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960569.1;locus_tag=VMS06_RS07815;product=YraN family protein;protein_id=WP_022649504.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 88049 90187 . - . ID=gene-VMS06_RS07820;Name=VMS06_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07820 NZ_JAVXZI010000005.1 Protein Homology CDS 88049 90187 . - 0 ID=cds-WP_058677042.1;Parent=gene-VMS06_RS07820;Dbxref=GenBank:WP_058677042.1;Name=WP_058677042.1;Ontology_term=GO:0008360,GO:0009252,GO:0004553,GO:0019899,GO:0030234;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,enzyme binding|0019899||IEA,enzyme regulator activity|0030234||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693925.1;locus_tag=VMS06_RS07820;product=penicillin-binding protein activator;protein_id=WP_058677042.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 90249 91112 . + . ID=gene-VMS06_RS07825;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=VMS06_RS07825 NZ_JAVXZI010000005.1 Protein Homology CDS 90249 91112 . + 0 ID=cds-WP_063147848.1;Parent=gene-VMS06_RS07825;Dbxref=GenBank:WP_063147848.1;Name=WP_063147848.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462176.1;locus_tag=VMS06_RS07825;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_063147848.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 91180 93069 . - . ID=gene-VMS06_RS07830;Name=VMS06_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07830 NZ_JAVXZI010000005.1 Protein Homology CDS 91180 93069 . - 0 ID=cds-WP_063147849.1;Parent=gene-VMS06_RS07830;Dbxref=GenBank:WP_063147849.1;Name=WP_063147849.1;Ontology_term=GO:0016052,GO:0004557;gbkey=CDS;go_function=alpha-galactosidase activity|0004557||IEA;go_process=carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861746.1;locus_tag=VMS06_RS07830;product=alpha-galactosidase;protein_id=WP_063147849.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 93086 94258 . - . ID=gene-VMS06_RS07835;Name=VMS06_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07835 NZ_JAVXZI010000005.1 Protein Homology CDS 93086 94258 . - 0 ID=cds-WP_063147850.1;Parent=gene-VMS06_RS07835;Dbxref=GenBank:WP_063147850.1;Name=WP_063147850.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861744.1;locus_tag=VMS06_RS07835;product=MalY/PatB family protein;protein_id=WP_063147850.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 94271 95842 . - . ID=gene-VMS06_RS07840;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=VMS06_RS07840 NZ_JAVXZI010000005.1 Protein Homology CDS 94271 95842 . - 0 ID=cds-WP_063147851.1;Parent=gene-VMS06_RS07840;Dbxref=GenBank:WP_063147851.1;Name=WP_063147851.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=malX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000192271.1;locus_tag=VMS06_RS07840;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_063147851.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 95959 96831 . - . ID=gene-VMS06_RS07845;Name=kbaY;gbkey=Gene;gene=kbaY;gene_biotype=protein_coding;locus_tag=VMS06_RS07845 NZ_JAVXZI010000005.1 Protein Homology CDS 95959 96831 . - 0 ID=cds-WP_003861740.1;Parent=gene-VMS06_RS07845;Dbxref=GenBank:WP_003861740.1;Name=WP_003861740.1;gbkey=CDS;gene=kbaY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861740.1;locus_tag=VMS06_RS07845;product=tagatose-bisphosphate aldolase subunit KbaY;protein_id=WP_003861740.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 96844 97989 . - . ID=gene-VMS06_RS07850;Name=VMS06_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07850 NZ_JAVXZI010000005.1 Protein Homology CDS 96844 97989 . - 0 ID=cds-WP_063147852.1;Parent=gene-VMS06_RS07850;Dbxref=GenBank:WP_063147852.1;Name=WP_063147852.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571960.1;locus_tag=VMS06_RS07850;product=SIS domain-containing protein;protein_id=WP_063147852.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 98236 99369 . - . ID=gene-VMS06_RS07855;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=VMS06_RS07855 NZ_JAVXZI010000005.1 Protein Homology CDS 98236 99369 . - 0 ID=cds-WP_063147853.1;Parent=gene-VMS06_RS07855;Dbxref=GenBank:WP_063147853.1;Name=WP_063147853.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098892.1;locus_tag=VMS06_RS07855;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_063147853.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 99366 99800 . - . ID=gene-VMS06_RS07860;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=VMS06_RS07860 NZ_JAVXZI010000005.1 Protein Homology CDS 99366 99800 . - 0 ID=cds-WP_032626392.1;Parent=gene-VMS06_RS07860;Dbxref=GenBank:WP_032626392.1;Name=WP_032626392.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312041.1;locus_tag=VMS06_RS07860;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_032626392.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 99817 100695 . - . ID=gene-VMS06_RS07865;Name=agaE;gbkey=Gene;gene=agaE;gene_biotype=protein_coding;locus_tag=VMS06_RS07865 NZ_JAVXZI010000005.1 Protein Homology CDS 99817 100695 . - 0 ID=cds-WP_022649494.1;Parent=gene-VMS06_RS07865;Dbxref=GenBank:WP_022649494.1;Name=WP_022649494.1;gbkey=CDS;gene=agaE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079236.1;locus_tag=VMS06_RS07865;product=PTS N-acetylgalactosamine transporter subunit IID;protein_id=WP_022649494.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 100685 101464 . - . ID=gene-VMS06_RS07870;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=VMS06_RS07870 NZ_JAVXZI010000005.1 Protein Homology CDS 100685 101464 . - 0 ID=cds-WP_003861730.1;Parent=gene-VMS06_RS07870;Dbxref=GenBank:WP_003861730.1;Name=WP_003861730.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312039.1;locus_tag=VMS06_RS07870;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_003861730.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 101475 101948 . - . ID=gene-VMS06_RS07875;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=VMS06_RS07875 NZ_JAVXZI010000005.1 Protein Homology CDS 101475 101948 . - 0 ID=cds-WP_003861728.1;Parent=gene-VMS06_RS07875;Dbxref=GenBank:WP_003861728.1;Name=WP_003861728.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312038.2;locus_tag=VMS06_RS07875;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_003861728.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 101968 103275 . - . ID=gene-VMS06_RS07880;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=VMS06_RS07880 NZ_JAVXZI010000005.1 Protein Homology CDS 101968 103275 . - 0 ID=cds-WP_063147854.1;Parent=gene-VMS06_RS07880;Dbxref=GenBank:WP_063147854.1;Name=WP_063147854.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098887.1;locus_tag=VMS06_RS07880;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_063147854.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 103515 104318 . + . ID=gene-VMS06_RS07885;Name=VMS06_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07885 NZ_JAVXZI010000005.1 Protein Homology CDS 103515 104318 . + 0 ID=cds-WP_063147855.1;Parent=gene-VMS06_RS07885;Dbxref=GenBank:WP_063147855.1;Name=WP_063147855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693937.1;locus_tag=VMS06_RS07885;product=DeoR family transcriptional regulator;protein_id=WP_063147855.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 104426 105997 . - . ID=gene-VMS06_RS07890;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=VMS06_RS07890 NZ_JAVXZI010000005.1 Protein Homology CDS 104426 105997 . - 0 ID=cds-WP_023307046.1;Parent=gene-VMS06_RS07890;Dbxref=GenBank:WP_023307046.1;Name=WP_023307046.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228976.1;locus_tag=VMS06_RS07890;product=galactarate dehydratase;protein_id=WP_023307046.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 106364 107134 . + . ID=gene-VMS06_RS07895;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=VMS06_RS07895 NZ_JAVXZI010000005.1 Protein Homology CDS 106364 107134 . + 0 ID=cds-WP_032676532.1;Parent=gene-VMS06_RS07895;Dbxref=GenBank:WP_032676532.1;Name=WP_032676532.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417595.1;locus_tag=VMS06_RS07895;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_032676532.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 107156 108046 . + . ID=gene-VMS06_RS07900;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=VMS06_RS07900 NZ_JAVXZI010000005.1 Protein Homology CDS 107156 108046 . + 0 ID=cds-WP_022649490.1;Parent=gene-VMS06_RS07900;Dbxref=GenBank:WP_022649490.1;Name=WP_022649490.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=VMS06_RS07900;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_022649490.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 108103 109248 . + . ID=gene-VMS06_RS07905;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=VMS06_RS07905 NZ_JAVXZI010000005.1 Protein Homology CDS 108103 109248 . + 0 ID=cds-WP_022649489.1;Parent=gene-VMS06_RS07905;Dbxref=GenBank:WP_022649489.1;Name=WP_022649489.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131728.1;locus_tag=VMS06_RS07905;product=glycerate 2-kinase;protein_id=WP_022649489.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 109281 109657 . + . ID=gene-VMS06_RS07910;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=VMS06_RS07910 NZ_JAVXZI010000005.1 cmsearch RNase_P_RNA 109281 109657 . + . ID=rna-VMS06_RS07910;Parent=gene-VMS06_RS07910;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS07910;product=RNase P RNA component class A NZ_JAVXZI010000005.1 cmsearch exon 109281 109657 . + . ID=exon-VMS06_RS07910-1;Parent=rna-VMS06_RS07910;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS07910;product=RNase P RNA component class A NZ_JAVXZI010000005.1 RefSeq gene 110330 111250 . + . ID=gene-VMS06_RS07915;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=VMS06_RS07915 NZ_JAVXZI010000005.1 Protein Homology CDS 110330 111250 . + 0 ID=cds-WP_023298702.1;Parent=gene-VMS06_RS07915;Dbxref=GenBank:WP_023298702.1;Name=WP_023298702.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178710.1;locus_tag=VMS06_RS07915;product=transcriptional regulator TdcA;protein_id=WP_023298702.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 111347 112336 . + . ID=gene-VMS06_RS07920;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=VMS06_RS07920 NZ_JAVXZI010000005.1 Protein Homology CDS 111347 112336 . + 0 ID=cds-WP_023298701.1;Parent=gene-VMS06_RS07920;Dbxref=GenBank:WP_023298701.1;Name=WP_023298701.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=threonine deaminase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312024.1;locus_tag=VMS06_RS07920;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_023298701.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 112346 113677 . + . ID=gene-VMS06_RS07925;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=VMS06_RS07925 NZ_JAVXZI010000005.1 Protein Homology CDS 112346 113677 . + 0 ID=cds-WP_022649486.1;Parent=gene-VMS06_RS07925;Dbxref=GenBank:WP_022649486.1;Name=WP_022649486.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462157.1;locus_tag=VMS06_RS07925;product=threonine/serine transporter TdcC;protein_id=WP_022649486.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 113708 114916 . + . ID=gene-VMS06_RS07930;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=VMS06_RS07930 NZ_JAVXZI010000005.1 Protein Homology CDS 113708 114916 . + 0 ID=cds-WP_063147857.1;Parent=gene-VMS06_RS07930;Dbxref=GenBank:WP_063147857.1;Name=WP_063147857.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417585.2;locus_tag=VMS06_RS07930;product=propionate kinase;protein_id=WP_063147857.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 114932 117226 . + . ID=gene-VMS06_RS07935;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=VMS06_RS07935 NZ_JAVXZI010000005.1 Protein Homology CDS 114932 117226 . + 0 ID=cds-WP_022649484.1;Parent=gene-VMS06_RS07935;Dbxref=GenBank:WP_022649484.1;Name=WP_022649484.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312021.1;locus_tag=VMS06_RS07935;product=formate C-acetyltransferase;protein_id=WP_022649484.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 117501 118832 . + . ID=gene-VMS06_RS07940;Name=VMS06_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07940 NZ_JAVXZI010000005.1 Protein Homology CDS 117501 118832 . + 0 ID=cds-WP_048965982.1;Parent=gene-VMS06_RS07940;Dbxref=GenBank:WP_048965982.1;Name=WP_048965982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462153.1;locus_tag=VMS06_RS07940;product=SLC5/6 family protein;protein_id=WP_048965982.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 118853 120154 . + . ID=gene-VMS06_RS07945;Name=VMS06_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07945 NZ_JAVXZI010000005.1 Protein Homology CDS 118853 120154 . + 0 ID=cds-WP_022649482.1;Parent=gene-VMS06_RS07945;Dbxref=GenBank:WP_022649482.1;Name=WP_022649482.1;Ontology_term=GO:0051539,GO:0080146;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,L-cysteine desulfhydrase activity|0080146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098874.1;locus_tag=VMS06_RS07945;product=L-cysteine desulfidase family protein;protein_id=WP_022649482.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 120248 120949 . - . ID=gene-VMS06_RS07950;Name=VMS06_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07950 NZ_JAVXZI010000005.1 Protein Homology CDS 120248 120949 . - 0 ID=cds-WP_063147858.1;Parent=gene-VMS06_RS07950;Dbxref=GenBank:WP_063147858.1;Name=WP_063147858.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417577.1;locus_tag=VMS06_RS07950;product=pirin family protein;protein_id=WP_063147858.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 121054 121956 . + . ID=gene-VMS06_RS07955;Name=yhaJ;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=VMS06_RS07955 NZ_JAVXZI010000005.1 Protein Homology CDS 121054 121956 . + 0 ID=cds-WP_022649480.1;Parent=gene-VMS06_RS07955;Dbxref=GenBank:WP_022649480.1;Name=WP_022649480.1;gbkey=CDS;gene=yhaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862655.1;locus_tag=VMS06_RS07955;product=DNA-binding transcriptional regulator YhaJ;protein_id=WP_022649480.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 122004 122369 . - . ID=gene-VMS06_RS07960;Name=VMS06_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07960 NZ_JAVXZI010000005.1 Protein Homology CDS 122004 122369 . - 0 ID=cds-WP_022649479.1;Parent=gene-VMS06_RS07960;Dbxref=GenBank:WP_022649479.1;Name=WP_022649479.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000384149.1;locus_tag=VMS06_RS07960;product=DUF805 domain-containing protein;protein_id=WP_022649479.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 122476 123462 . - . ID=gene-VMS06_RS07965;Name=VMS06_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07965 NZ_JAVXZI010000005.1 Protein Homology CDS 122476 123462 . - 0 ID=cds-WP_003862653.1;Parent=gene-VMS06_RS07965;Dbxref=GenBank:WP_003862653.1;Name=WP_003862653.1;Ontology_term=GO:0004364,GO:0016491;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708909.2;locus_tag=VMS06_RS07965;product=glutathione S-transferase family protein;protein_id=WP_003862653.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 123535 123927 . - . ID=gene-VMS06_RS07970;Name=VMS06_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07970 NZ_JAVXZI010000005.1 Protein Homology CDS 123535 123927 . - 0 ID=cds-WP_032626373.1;Parent=gene-VMS06_RS07970;Dbxref=GenBank:WP_032626373.1;Name=WP_032626373.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=VMS06_RS07970;product=DoxX family protein;protein_id=WP_032626373.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 124181 124477 . - . ID=gene-VMS06_RS07975;Name=VMS06_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07975 NZ_JAVXZI010000005.1 Protein Homology CDS 124181 124477 . - 0 ID=cds-WP_022649477.1;Parent=gene-VMS06_RS07975;Dbxref=GenBank:WP_022649477.1;Name=WP_022649477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435892.1;locus_tag=VMS06_RS07975;product=YqjK-like family protein;protein_id=WP_022649477.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 124474 124872 . - . ID=gene-VMS06_RS07980;Name=VMS06_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07980 NZ_JAVXZI010000005.1 Protein Homology CDS 124474 124872 . - 0 ID=cds-WP_003862647.1;Parent=gene-VMS06_RS07980;Dbxref=GenBank:WP_003862647.1;Name=WP_003862647.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178687.1;locus_tag=VMS06_RS07980;product=phage holin family protein;protein_id=WP_003862647.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 124875 125180 . - . ID=gene-VMS06_RS07985;Name=VMS06_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07985 NZ_JAVXZI010000005.1 Protein Homology CDS 124875 125180 . - 0 ID=cds-WP_008503141.1;Parent=gene-VMS06_RS07985;Dbxref=GenBank:WP_008503141.1;Name=WP_008503141.1;Ontology_term=GO:0043022,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312007.1;locus_tag=VMS06_RS07985;product=ElaB/YgaM/YqjD family protein;protein_id=WP_008503141.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 125210 125578 . - . ID=gene-VMS06_RS07990;Name=VMS06_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS07990 NZ_JAVXZI010000005.1 Protein Homology CDS 125210 125578 . - 0 ID=cds-WP_017382428.1;Parent=gene-VMS06_RS07990;Dbxref=GenBank:WP_017382428.1;Name=WP_017382428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462142.1;locus_tag=VMS06_RS07990;product=DUF1090 domain-containing protein;protein_id=WP_017382428.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 125722 126105 . - . ID=gene-VMS06_RS07995;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=VMS06_RS07995 NZ_JAVXZI010000005.1 Protein Homology CDS 125722 126105 . - 0 ID=cds-WP_022649476.1;Parent=gene-VMS06_RS07995;Dbxref=GenBank:WP_022649476.1;Name=WP_022649476.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812072.1;locus_tag=VMS06_RS07995;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_022649476.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 126108 126770 . - . ID=gene-VMS06_RS08000;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=VMS06_RS08000 NZ_JAVXZI010000005.1 Protein Homology CDS 126108 126770 . - 0 ID=cds-WP_022649475.1;Parent=gene-VMS06_RS08000;Dbxref=GenBank:WP_022649475.1;Name=WP_022649475.1;gbkey=CDS;gene=yqjA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312004.1;locus_tag=VMS06_RS08000;product=DedA family general envelope maintenance protein YqjA;protein_id=WP_022649475.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 127112 127888 . - . ID=gene-VMS06_RS08005;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=VMS06_RS08005 NZ_JAVXZI010000005.1 Protein Homology CDS 127112 127888 . - 0 ID=cds-WP_063147859.1;Parent=gene-VMS06_RS08005;Dbxref=GenBank:WP_063147859.1;Name=WP_063147859.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862635.1;locus_tag=VMS06_RS08005;product=transcriptional regulator ExuR;protein_id=WP_063147859.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 128085 129383 . - . ID=gene-VMS06_RS08010;Name=VMS06_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08010 NZ_JAVXZI010000005.1 Protein Homology CDS 128085 129383 . - 0 ID=cds-WP_022649474.1;Parent=gene-VMS06_RS08010;Dbxref=GenBank:WP_022649474.1;Name=WP_022649474.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228954.1;locus_tag=VMS06_RS08010;product=MFS transporter;protein_id=WP_022649474.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 129859 131271 . + . ID=gene-VMS06_RS08015;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=VMS06_RS08015 NZ_JAVXZI010000005.1 Protein Homology CDS 129859 131271 . + 0 ID=cds-WP_063137981.1;Parent=gene-VMS06_RS08015;Dbxref=GenBank:WP_063137981.1;Name=WP_063137981.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=VMS06_RS08015;product=glucuronate isomerase;protein_id=WP_063137981.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 131289 132776 . + . ID=gene-VMS06_RS08020;Name=VMS06_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08020 NZ_JAVXZI010000005.1 Protein Homology CDS 131289 132776 . + 0 ID=cds-WP_063147860.1;Parent=gene-VMS06_RS08020;Dbxref=GenBank:WP_063147860.1;Name=WP_063147860.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=VMS06_RS08020;product=UxaA family hydrolase;protein_id=WP_063147860.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 132916 134157 . - . ID=gene-VMS06_RS08025;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=VMS06_RS08025 NZ_JAVXZI010000005.1 Protein Homology CDS 132916 134157 . - 0 ID=cds-WP_022649471.1;Parent=gene-VMS06_RS08025;Dbxref=GenBank:WP_022649471.1;Name=WP_022649471.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098858.1;locus_tag=VMS06_RS08025;product=serine/threonine transporter SstT;protein_id=WP_022649471.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 134433 135398 . - . ID=gene-VMS06_RS08030;Name=VMS06_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08030 NZ_JAVXZI010000005.1 Protein Homology CDS 134433 135398 . - 0 ID=cds-WP_022649470.1;Parent=gene-VMS06_RS08030;Dbxref=GenBank:WP_022649470.1;Name=WP_022649470.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098857.1;locus_tag=VMS06_RS08030;product=TerC family protein;protein_id=WP_022649470.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 135651 136649 . - . ID=gene-VMS06_RS08035;Name=VMS06_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08035 NZ_JAVXZI010000005.1 Protein Homology CDS 135651 136649 . - 0 ID=cds-WP_022649469.1;Parent=gene-VMS06_RS08035;Dbxref=GenBank:WP_022649469.1;Name=WP_022649469.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435866.1;locus_tag=VMS06_RS08035;product=Gfo/Idh/MocA family protein;protein_id=WP_022649469.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 136720 137223 . - . ID=gene-VMS06_RS08040;Name=VMS06_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08040 NZ_JAVXZI010000005.1 Protein Homology CDS 136720 137223 . - 0 ID=cds-WP_063147861.1;Parent=gene-VMS06_RS08040;Dbxref=GenBank:WP_063147861.1;Name=WP_063147861.1;Ontology_term=GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862622.1;locus_tag=VMS06_RS08040;product=M48 metallopeptidase family protein;protein_id=WP_063147861.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 137307 138443 . + . ID=gene-VMS06_RS08045;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=VMS06_RS08045 NZ_JAVXZI010000005.1 Protein Homology CDS 137307 138443 . + 0 ID=cds-WP_023298689.1;Parent=gene-VMS06_RS08045;Dbxref=GenBank:WP_023298689.1;Name=WP_023298689.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311993.2;locus_tag=VMS06_RS08045;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_023298689.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 138576 140597 . - . ID=gene-VMS06_RS08050;Name=VMS06_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08050 NZ_JAVXZI010000005.1 Protein Homology CDS 138576 140597 . - 0 ID=cds-WP_063147862.1;Parent=gene-VMS06_RS08050;Dbxref=GenBank:WP_063147862.1;Name=WP_063147862.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885316.1;locus_tag=VMS06_RS08050;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_063147862.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 140885 142471 . - . ID=gene-VMS06_RS08055;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=VMS06_RS08055 NZ_JAVXZI010000005.1 Protein Homology CDS 140885 142471 . - 0 ID=cds-WP_063137977.1;Parent=gene-VMS06_RS08055;Dbxref=GenBank:WP_063137977.1;Name=WP_063137977.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228942.1;locus_tag=VMS06_RS08055;product=autoinducer-2 kinase;protein_id=WP_063137977.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 142505 143476 . - . ID=gene-VMS06_RS08060;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=VMS06_RS08060 NZ_JAVXZI010000005.1 Protein Homology CDS 142505 143476 . - 0 ID=cds-WP_022649464.1;Parent=gene-VMS06_RS08060;Dbxref=GenBank:WP_022649464.1;Name=WP_022649464.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228941.1;locus_tag=VMS06_RS08060;product=transcriptional regulator LsrR;protein_id=WP_022649464.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 143692 145179 . + . ID=gene-VMS06_RS08065;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=VMS06_RS08065 NZ_JAVXZI010000005.1 Protein Homology CDS 143692 145179 . + 0 ID=cds-WP_063147863.1;Parent=gene-VMS06_RS08065;Dbxref=GenBank:WP_063147863.1;Name=WP_063147863.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883582.1;locus_tag=VMS06_RS08065;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_063147863.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 145176 146207 . + . ID=gene-VMS06_RS08070;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=VMS06_RS08070 NZ_JAVXZI010000005.1 Protein Homology CDS 145176 146207 . + 0 ID=cds-WP_063147864.1;Parent=gene-VMS06_RS08070;Dbxref=GenBank:WP_063147864.1;Name=WP_063147864.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228939.1;locus_tag=VMS06_RS08070;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_063147864.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 146208 147185 . + . ID=gene-VMS06_RS08075;Name=lsrD;gbkey=Gene;gene=lsrD;gene_biotype=protein_coding;locus_tag=VMS06_RS08075 NZ_JAVXZI010000005.1 Protein Homology CDS 146208 147185 . + 0 ID=cds-WP_063843660.1;Parent=gene-VMS06_RS08075;Dbxref=GenBank:WP_063843660.1;Name=WP_063843660.1;gbkey=CDS;gene=lsrD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571930.1;locus_tag=VMS06_RS08075;product=autoinducer 2 ABC transporter permease LsrD;protein_id=WP_063843660.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 147187 148188 . + . ID=gene-VMS06_RS08080;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=VMS06_RS08080 NZ_JAVXZI010000005.1 Protein Homology CDS 147187 148188 . + 0 ID=cds-WP_045308011.1;Parent=gene-VMS06_RS08080;Dbxref=GenBank:WP_045308011.1;Name=WP_045308011.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228937.1;locus_tag=VMS06_RS08080;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_045308011.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 148200 149087 . + . ID=gene-VMS06_RS08085;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=VMS06_RS08085 NZ_JAVXZI010000005.1 Protein Homology CDS 148200 149087 . + 0 ID=cds-WP_022649459.1;Parent=gene-VMS06_RS08085;Dbxref=GenBank:WP_022649459.1;Name=WP_022649459.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228936.1;locus_tag=VMS06_RS08085;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_022649459.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 149084 149377 . + . ID=gene-VMS06_RS08090;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=VMS06_RS08090 NZ_JAVXZI010000005.1 Protein Homology CDS 149084 149377 . + 0 ID=cds-WP_022649458.1;Parent=gene-VMS06_RS08090;Dbxref=GenBank:WP_022649458.1;Name=WP_022649458.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812054.1;locus_tag=VMS06_RS08090;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_022649458.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 149516 150895 . - . ID=gene-VMS06_RS08095;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=VMS06_RS08095 NZ_JAVXZI010000005.1 Protein Homology CDS 149516 150895 . - 0 ID=cds-WP_022649457.1;Parent=gene-VMS06_RS08095;Dbxref=GenBank:WP_022649457.1;Name=WP_022649457.1;Ontology_term=GO:0009447,GO:0030170,GO:0033094;gbkey=CDS;gene=ygjG;go_function=pyridoxal phosphate binding|0030170||IEA,putrescine--2-oxoglutarate transaminase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417544.5;locus_tag=VMS06_RS08095;product=putrescine aminotransferase;protein_id=WP_022649457.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 151318 152838 . + . ID=gene-VMS06_RS08100;Name=VMS06_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08100 NZ_JAVXZI010000005.1 Protein Homology CDS 151318 152838 . + 0 ID=cds-WP_063147866.1;Parent=gene-VMS06_RS08100;Dbxref=GenBank:WP_063147866.1;Name=WP_063147866.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311981.2;locus_tag=VMS06_RS08100;product=methyl-accepting chemotaxis protein;protein_id=WP_063147866.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 153078 154637 . + . ID=gene-VMS06_RS08105;Name=VMS06_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08105 NZ_JAVXZI010000005.1 Protein Homology CDS 153078 154637 . + 0 ID=cds-WP_063147867.1;Parent=gene-VMS06_RS08105;Dbxref=GenBank:WP_063147867.1;Name=WP_063147867.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862597.1;locus_tag=VMS06_RS08105;product=methyl-accepting chemotaxis protein;protein_id=WP_063147867.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 154634 155128 . - . ID=gene-VMS06_RS08110;Name=VMS06_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08110 NZ_JAVXZI010000005.1 Protein Homology CDS 154634 155128 . - 0 ID=cds-WP_017382401.1;Parent=gene-VMS06_RS08110;Dbxref=GenBank:WP_017382401.1;Name=WP_017382401.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812047.1;locus_tag=VMS06_RS08110;product=PadR family transcriptional regulator;protein_id=WP_017382401.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 155274 156038 . + . ID=gene-VMS06_RS08115;Name=VMS06_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08115 NZ_JAVXZI010000005.1 Protein Homology CDS 155274 156038 . + 0 ID=cds-WP_032626343.1;Parent=gene-VMS06_RS08115;Dbxref=GenBank:WP_032626343.1;Name=WP_032626343.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571916.1;locus_tag=VMS06_RS08115;product=siderophore-interacting protein;protein_id=WP_032626343.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 156039 157208 . - . ID=gene-VMS06_RS08120;Name=VMS06_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08120 NZ_JAVXZI010000005.1 Protein Homology CDS 156039 157208 . - 0 ID=cds-WP_063147868.1;Parent=gene-VMS06_RS08120;Dbxref=GenBank:WP_063147868.1;Name=WP_063147868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692643.1;locus_tag=VMS06_RS08120;product=coiled-coil domain-containing protein;protein_id=WP_063147868.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq pseudogene 157687 157815 . + . ID=gene-VMS06_RS08125;Name=VMS06_RS08125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS08125;partial=true;pseudo=true;start_range=.,157687 NZ_JAVXZI010000005.1 Protein Homology CDS 157687 157815 . + 0 ID=cds-VMS06_RS08125;Parent=gene-VMS06_RS08125;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013098813.1;locus_tag=VMS06_RS08125;partial=true;product=outer membrane protein;pseudo=true;start_range=.,157687;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 158091 158801 . - . ID=gene-VMS06_RS08130;Name=VMS06_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08130 NZ_JAVXZI010000005.1 Protein Homology CDS 158091 158801 . - 0 ID=cds-WP_045308005.1;Parent=gene-VMS06_RS08130;Dbxref=GenBank:WP_045308005.1;Name=WP_045308005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370025.1;locus_tag=VMS06_RS08130;product=hypothetical protein;protein_id=WP_045308005.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 158873 159127 . + . ID=gene-VMS06_RS08135;Name=VMS06_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08135 NZ_JAVXZI010000005.1 Protein Homology CDS 158873 159127 . + 0 ID=cds-WP_022649451.1;Parent=gene-VMS06_RS08135;Dbxref=GenBank:WP_022649451.1;Name=WP_022649451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370026.1;locus_tag=VMS06_RS08135;product=hypothetical protein;protein_id=WP_022649451.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 159481 160278 . - . ID=gene-VMS06_RS08140;Name=VMS06_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08140 NZ_JAVXZI010000005.1 GeneMarkS-2+ CDS 159481 160278 . - 0 ID=cds-WP_323630636.1;Parent=gene-VMS06_RS08140;Dbxref=GenBank:WP_323630636.1;Name=WP_323630636.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS08140;product=hypothetical protein;protein_id=WP_323630636.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 160275 161294 . - . ID=gene-VMS06_RS08145;Name=VMS06_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08145 NZ_JAVXZI010000005.1 Protein Homology CDS 160275 161294 . - 0 ID=cds-WP_200480809.1;Parent=gene-VMS06_RS08145;Dbxref=GenBank:WP_200480809.1;Name=WP_200480809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017894106.1;locus_tag=VMS06_RS08145;product=phage integrase;protein_id=WP_200480809.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 161296 161877 . - . ID=gene-VMS06_RS08150;Name=VMS06_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08150 NZ_JAVXZI010000005.1 Protein Homology CDS 161296 161877 . - 0 ID=cds-WP_063436778.1;Parent=gene-VMS06_RS08150;Dbxref=GenBank:WP_063436778.1;Name=WP_063436778.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514631.1;locus_tag=VMS06_RS08150;product=phage repressor protein CI;protein_id=WP_063436778.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 162021 162242 . + . ID=gene-VMS06_RS08155;Name=VMS06_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08155 NZ_JAVXZI010000005.1 Protein Homology CDS 162021 162242 . + 0 ID=cds-WP_023136170.1;Parent=gene-VMS06_RS08155;Dbxref=GenBank:WP_023136170.1;Name=WP_023136170.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010836041.1;locus_tag=VMS06_RS08155;product=helix-turn-helix transcriptional regulator;protein_id=WP_023136170.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 162273 162776 . + . ID=gene-VMS06_RS08160;Name=VMS06_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08160 NZ_JAVXZI010000005.1 Protein Homology CDS 162273 162776 . + 0 ID=cds-WP_323630637.1;Parent=gene-VMS06_RS08160;Dbxref=GenBank:WP_323630637.1;Name=WP_323630637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000460876.1;locus_tag=VMS06_RS08160;product=phage regulatory CII family protein;protein_id=WP_323630637.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 162786 162980 . + . ID=gene-VMS06_RS08165;Name=VMS06_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08165 NZ_JAVXZI010000005.1 Protein Homology CDS 162786 162980 . + 0 ID=cds-WP_271040614.1;Parent=gene-VMS06_RS08165;Dbxref=GenBank:WP_271040614.1;Name=WP_271040614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000643374.1;locus_tag=VMS06_RS08165;product=phage filamentation protein Fil family protein;protein_id=WP_271040614.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 162970 163398 . + . ID=gene-VMS06_RS08170;Name=VMS06_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08170 NZ_JAVXZI010000005.1 Protein Homology CDS 162970 163398 . + 0 ID=cds-WP_323630638.1;Parent=gene-VMS06_RS08170;Dbxref=GenBank:WP_323630638.1;Name=WP_323630638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018324.1;locus_tag=VMS06_RS08170;product=hypothetical protein;protein_id=WP_323630638.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 163398 163799 . + . ID=gene-VMS06_RS08175;Name=VMS06_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08175 NZ_JAVXZI010000005.1 Protein Homology CDS 163398 163799 . + 0 ID=cds-WP_271040616.1;Parent=gene-VMS06_RS08175;Dbxref=GenBank:WP_271040616.1;Name=WP_271040616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738709.1;locus_tag=VMS06_RS08175;product=hypothetical protein;protein_id=WP_271040616.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 163866 164099 . + . ID=gene-VMS06_RS08180;Name=VMS06_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08180 NZ_JAVXZI010000005.1 Protein Homology CDS 163866 164099 . + 0 ID=cds-WP_013097407.1;Parent=gene-VMS06_RS08180;Dbxref=GenBank:WP_013097407.1;Name=WP_013097407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738711.1;locus_tag=VMS06_RS08180;product=DUF2732 family protein;protein_id=WP_013097407.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 164090 164332 . + . ID=gene-VMS06_RS08185;Name=VMS06_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08185 NZ_JAVXZI010000005.1 GeneMarkS-2+ CDS 164090 164332 . + 0 ID=cds-WP_323630639.1;Parent=gene-VMS06_RS08185;Dbxref=GenBank:WP_323630639.1;Name=WP_323630639.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS08185;product=hypothetical protein;protein_id=WP_323630639.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 164329 165201 . + . ID=gene-VMS06_RS08190;Name=VMS06_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08190 NZ_JAVXZI010000005.1 Protein Homology CDS 164329 165201 . + 0 ID=cds-WP_323630640.1;Parent=gene-VMS06_RS08190;Dbxref=GenBank:WP_323630640.1;Name=WP_323630640.1;Ontology_term=GO:0032775,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=obsolete DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097406.1;locus_tag=VMS06_RS08190;product=DNA adenine methylase;protein_id=WP_323630640.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 165198 165410 . + . ID=gene-VMS06_RS08195;Name=VMS06_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08195 NZ_JAVXZI010000005.1 GeneMarkS-2+ CDS 165198 165410 . + 0 ID=cds-WP_323630641.1;Parent=gene-VMS06_RS08195;Dbxref=GenBank:WP_323630641.1;Name=WP_323630641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS08195;product=hypothetical protein;protein_id=WP_323630641.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 165412 167427 . + . ID=gene-VMS06_RS08200;Name=VMS06_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08200 NZ_JAVXZI010000005.1 Protein Homology CDS 165412 167427 . + 0 ID=cds-WP_323630646.1;Parent=gene-VMS06_RS08200;Dbxref=GenBank:WP_323630646.1;Name=WP_323630646.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097404.1;locus_tag=VMS06_RS08200;product=replication endonuclease;protein_id=WP_323630646.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 167549 167755 . + . ID=gene-VMS06_RS08205;Name=VMS06_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08205 NZ_JAVXZI010000005.1 Protein Homology CDS 167549 167755 . + 0 ID=cds-WP_058692165.1;Parent=gene-VMS06_RS08205;Dbxref=GenBank:WP_058692165.1;Name=WP_058692165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000353144.1;locus_tag=VMS06_RS08205;product=hypothetical protein;protein_id=WP_058692165.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 167729 168052 . - . ID=gene-VMS06_RS08210;Name=VMS06_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08210 NZ_JAVXZI010000005.1 Protein Homology CDS 167729 168052 . - 0 ID=cds-WP_045626029.1;Parent=gene-VMS06_RS08210;Dbxref=GenBank:WP_045626029.1;Name=WP_045626029.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001552031.1;locus_tag=VMS06_RS08210;product=Ogr/Delta-like zinc finger protein;protein_id=WP_045626029.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 168049 169101 . - . ID=gene-VMS06_RS08215;Name=VMS06_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08215 NZ_JAVXZI010000005.1 Protein Homology CDS 168049 169101 . - 0 ID=cds-WP_063412015.1;Parent=gene-VMS06_RS08215;Dbxref=GenBank:WP_063412015.1;Name=WP_063412015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000038863.1;locus_tag=VMS06_RS08215;product=phage portal protein;protein_id=WP_063412015.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 169098 170873 . - . ID=gene-VMS06_RS08220;Name=VMS06_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08220 NZ_JAVXZI010000005.1 Protein Homology CDS 169098 170873 . - 0 ID=cds-WP_063945467.1;Parent=gene-VMS06_RS08220;Dbxref=GenBank:WP_063945467.1;Name=WP_063945467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001151939.1;locus_tag=VMS06_RS08220;product=terminase large subunit domain-containing protein;protein_id=WP_063945467.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 171046 171843 . + . ID=gene-VMS06_RS08225;Name=VMS06_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08225 NZ_JAVXZI010000005.1 Protein Homology CDS 171046 171843 . + 0 ID=cds-WP_058691963.1;Parent=gene-VMS06_RS08225;Dbxref=GenBank:WP_058691963.1;Name=WP_058691963.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000018795.1;locus_tag=VMS06_RS08225;product=GPO family capsid scaffolding protein;protein_id=WP_058691963.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 171903 172925 . + . ID=gene-VMS06_RS08230;Name=VMS06_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08230 NZ_JAVXZI010000005.1 Protein Homology CDS 171903 172925 . + 0 ID=cds-WP_039268761.1;Parent=gene-VMS06_RS08230;Dbxref=GenBank:WP_039268761.1;Name=WP_039268761.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000550496.1;locus_tag=VMS06_RS08230;product=phage major capsid protein%2C P2 family;protein_id=WP_039268761.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 172928 173629 . + . ID=gene-VMS06_RS08235;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=VMS06_RS08235 NZ_JAVXZI010000005.1 Protein Homology CDS 172928 173629 . + 0 ID=cds-WP_058691962.1;Parent=gene-VMS06_RS08235;Dbxref=GenBank:WP_058691962.1;Name=WP_058691962.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218529.1;locus_tag=VMS06_RS08235;product=phage terminase small subunit;protein_id=WP_058691962.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 173728 174180 . + . ID=gene-VMS06_RS08240;Name=VMS06_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08240 NZ_JAVXZI010000005.1 Protein Homology CDS 173728 174180 . + 0 ID=cds-WP_072204240.1;Parent=gene-VMS06_RS08240;Dbxref=GenBank:WP_072204240.1;Name=WP_072204240.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738723.1;locus_tag=VMS06_RS08240;product=head completion/stabilization protein;protein_id=WP_072204240.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 174177 174683 . + . ID=gene-VMS06_RS08245;Name=VMS06_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08245 NZ_JAVXZI010000005.1 Protein Homology CDS 174177 174683 . + 0 ID=cds-WP_058691960.1;Parent=gene-VMS06_RS08245;Dbxref=GenBank:WP_058691960.1;Name=WP_058691960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097395.1;locus_tag=VMS06_RS08245;product=phage tail protein;protein_id=WP_058691960.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 174680 175387 . + . ID=gene-VMS06_RS08250;Name=VMS06_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08250 NZ_JAVXZI010000005.1 Protein Homology CDS 174680 175387 . + 0 ID=cds-WP_063945469.1;Parent=gene-VMS06_RS08250;Dbxref=GenBank:WP_063945469.1;Name=WP_063945469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560077.1;locus_tag=VMS06_RS08250;product=hypothetical protein;protein_id=WP_063945469.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 175384 176511 . + . ID=gene-VMS06_RS08255;Name=VMS06_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08255 NZ_JAVXZI010000005.1 Protein Homology CDS 175384 176511 . + 0 ID=cds-WP_323630642.1;Parent=gene-VMS06_RS08255;Dbxref=GenBank:WP_323630642.1;Name=WP_323630642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748631.1;locus_tag=VMS06_RS08255;product=DUF2586 domain-containing protein;protein_id=WP_323630642.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 176508 176963 . + . ID=gene-VMS06_RS08260;Name=VMS06_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08260 NZ_JAVXZI010000005.1 Protein Homology CDS 176508 176963 . + 0 ID=cds-WP_032657750.1;Parent=gene-VMS06_RS08260;Dbxref=GenBank:WP_032657750.1;Name=WP_032657750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000044254.1;locus_tag=VMS06_RS08260;product=phage protein;protein_id=WP_032657750.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 176973 177260 . + . ID=gene-VMS06_RS08265;Name=VMS06_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08265 NZ_JAVXZI010000005.1 Protein Homology CDS 176973 177260 . + 0 ID=cds-WP_058691957.1;Parent=gene-VMS06_RS08265;Dbxref=GenBank:WP_058691957.1;Name=WP_058691957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015386841.1;locus_tag=VMS06_RS08265;product=phage holin family protein;protein_id=WP_058691957.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 177257 177598 . + . ID=gene-VMS06_RS08270;Name=VMS06_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08270 NZ_JAVXZI010000005.1 Protein Homology CDS 177257 177598 . + 0 ID=cds-WP_058691958.1;Parent=gene-VMS06_RS08270;Dbxref=GenBank:WP_058691958.1;Name=WP_058691958.1;Ontology_term=GO:0071554,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=cell wall organization or biogenesis|0071554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007710822.1;locus_tag=VMS06_RS08270;product=M15 family metallopeptidase;protein_id=WP_058691958.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 177598 177966 . + . ID=gene-VMS06_RS08275;Name=VMS06_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08275 NZ_JAVXZI010000005.1 Protein Homology CDS 177598 177966 . + 0 ID=cds-WP_045891403.1;Parent=gene-VMS06_RS08275;Dbxref=GenBank:WP_045891403.1;Name=WP_045891403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097389.1;locus_tag=VMS06_RS08275;product=hypothetical protein;protein_id=WP_045891403.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 178086 178346 . + . ID=gene-VMS06_RS08280;Name=VMS06_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08280 NZ_JAVXZI010000005.1 Protein Homology CDS 178086 178346 . + 0 ID=cds-WP_058691973.1;Parent=gene-VMS06_RS08280;Dbxref=GenBank:WP_058691973.1;Name=WP_058691973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097388.1;locus_tag=VMS06_RS08280;product=putative phage tail assembly chaperone;protein_id=WP_058691973.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 178394 178537 . + . ID=gene-VMS06_RS22870;Name=VMS06_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22870 NZ_JAVXZI010000005.1 Protein Homology CDS 178394 178537 . + 0 ID=cds-WP_370883309.1;Parent=gene-VMS06_RS22870;Dbxref=GenBank:WP_370883309.1;Name=WP_370883309.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046438.3;locus_tag=VMS06_RS22870;product=DUF6890 family protein;protein_id=WP_370883309.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 178534 180885 . + . ID=gene-VMS06_RS08285;Name=VMS06_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08285 NZ_JAVXZI010000005.1 Protein Homology CDS 178534 180885 . + 0 ID=cds-WP_323630643.1;Parent=gene-VMS06_RS08285;Dbxref=GenBank:WP_323630643.1;Name=WP_323630643.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013575833.1;locus_tag=VMS06_RS08285;product=phage tail tape measure protein;protein_id=WP_323630643.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 180882 181211 . + . ID=gene-VMS06_RS08290;Name=VMS06_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08290 NZ_JAVXZI010000005.1 Protein Homology CDS 180882 181211 . + 0 ID=cds-WP_039268773.1;Parent=gene-VMS06_RS08290;Dbxref=GenBank:WP_039268773.1;Name=WP_039268773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001289823.1;locus_tag=VMS06_RS08290;product=DUF2590 family protein;protein_id=WP_039268773.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 181208 182392 . + . ID=gene-VMS06_RS08295;Name=VMS06_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08295 NZ_JAVXZI010000005.1 Protein Homology CDS 181208 182392 . + 0 ID=cds-WP_058692053.1;Parent=gene-VMS06_RS08295;Dbxref=GenBank:WP_058692053.1;Name=WP_058692053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016507090.1;locus_tag=VMS06_RS08295;product=baseplate J/gp47 family protein;protein_id=WP_058692053.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 182385 182972 . + . ID=gene-VMS06_RS08300;Name=VMS06_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08300 NZ_JAVXZI010000005.1 Protein Homology CDS 182385 182972 . + 0 ID=cds-WP_058692054.1;Parent=gene-VMS06_RS08300;Dbxref=GenBank:WP_058692054.1;Name=WP_058692054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006772868.1;locus_tag=VMS06_RS08300;product=hypothetical protein;protein_id=WP_058692054.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 182982 185408 . + . ID=gene-VMS06_RS08305;Name=VMS06_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08305 NZ_JAVXZI010000005.1 Protein Homology CDS 182982 185408 . + 0 ID=cds-WP_080398029.1;Parent=gene-VMS06_RS08305;Dbxref=GenBank:WP_080398029.1;Name=WP_080398029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104690.1;locus_tag=VMS06_RS08305;product=phage tail-collar fiber domain-containing protein;protein_id=WP_080398029.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 185408 185989 . + . ID=gene-VMS06_RS08310;Name=VMS06_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08310 NZ_JAVXZI010000005.1 Protein Homology CDS 185408 185989 . + 0 ID=cds-WP_058692055.1;Parent=gene-VMS06_RS08310;Dbxref=GenBank:WP_058692055.1;Name=WP_058692055.1;Ontology_term=GO:0098004;gbkey=CDS;go_process=virus tail fiber assembly|0098004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000885624.1;locus_tag=VMS06_RS08310;product=tail fiber assembly protein;protein_id=WP_058692055.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 185979 186704 . + . ID=gene-VMS06_RS08315;Name=VMS06_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08315 NZ_JAVXZI010000005.1 Protein Homology CDS 185979 186704 . + 0 ID=cds-WP_058692056.1;Parent=gene-VMS06_RS08315;Dbxref=GenBank:WP_058692056.1;Name=WP_058692056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000267957.1;locus_tag=VMS06_RS08315;product=hypothetical protein;protein_id=WP_058692056.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 186676 187224 . + . ID=gene-VMS06_RS08320;Name=VMS06_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08320 NZ_JAVXZI010000005.1 Protein Homology CDS 186676 187224 . + 0 ID=cds-WP_045891393.1;Parent=gene-VMS06_RS08320;Dbxref=GenBank:WP_045891393.1;Name=WP_045891393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200792.1;locus_tag=VMS06_RS08320;product=baseplate complex protein;protein_id=WP_045891393.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 187227 188903 . + . ID=gene-VMS06_RS08325;Name=VMS06_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08325 NZ_JAVXZI010000005.1 Protein Homology CDS 187227 188903 . + 0 ID=cds-WP_323630644.1;Parent=gene-VMS06_RS08325;Dbxref=GenBank:WP_323630644.1;Name=WP_323630644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097379.1;locus_tag=VMS06_RS08325;product=hypothetical protein;protein_id=WP_323630644.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 188942 189307 . + . ID=gene-VMS06_RS08330;Name=VMS06_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08330 NZ_JAVXZI010000005.1 GeneMarkS-2+ CDS 188942 189307 . + 0 ID=cds-WP_154606632.1;Parent=gene-VMS06_RS08330;Dbxref=GenBank:WP_154606632.1;Name=WP_154606632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS08330;product=hypothetical protein;protein_id=WP_154606632.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 189478 190050 . - . ID=gene-VMS06_RS08335;Name=VMS06_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08335 NZ_JAVXZI010000005.1 Protein Homology CDS 189478 190050 . - 0 ID=cds-WP_058692058.1;Parent=gene-VMS06_RS08335;Dbxref=GenBank:WP_058692058.1;Name=WP_058692058.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process from L-serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015461285.1;locus_tag=VMS06_RS08335;product=serine acetyltransferase;protein_id=WP_058692058.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 190270 190345 . - . ID=gene-VMS06_RS08340;Name=VMS06_RS08340;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS08340 NZ_JAVXZI010000005.1 tRNAscan-SE tRNA 190270 190345 . - . ID=rna-VMS06_RS08340;Parent=gene-VMS06_RS08340;anticodon=(pos:complement(190310..190312));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS08340;product=tRNA-Ile NZ_JAVXZI010000005.1 tRNAscan-SE exon 190270 190345 . - . ID=exon-VMS06_RS08340-1;Parent=rna-VMS06_RS08340;anticodon=(pos:complement(190310..190312));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS08340;product=tRNA-Ile NZ_JAVXZI010000005.1 RefSeq gene 190470 190976 . + . ID=gene-VMS06_RS08345;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=VMS06_RS08345 NZ_JAVXZI010000005.1 Protein Homology CDS 190470 190976 . + 0 ID=cds-WP_023298636.1;Parent=gene-VMS06_RS08345;Dbxref=GenBank:WP_023298636.1;Name=WP_023298636.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384024.1;locus_tag=VMS06_RS08345;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_023298636.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 191079 192923 . - . ID=gene-VMS06_RS08350;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=VMS06_RS08350 NZ_JAVXZI010000005.1 Protein Homology CDS 191079 192923 . - 0 ID=cds-WP_006812010.1;Parent=gene-VMS06_RS08350;Dbxref=GenBank:WP_006812010.1;Name=WP_006812010.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228906.1;locus_tag=VMS06_RS08350;product=RNA polymerase sigma factor RpoD;protein_id=WP_006812010.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 193077 194822 . - . ID=gene-VMS06_RS08355;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=VMS06_RS08355 NZ_JAVXZI010000005.1 Protein Homology CDS 193077 194822 . - 0 ID=cds-WP_003862574.1;Parent=gene-VMS06_RS08355;Dbxref=GenBank:WP_003862574.1;Name=WP_003862574.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228905.1;locus_tag=VMS06_RS08355;product=DNA primase;protein_id=WP_003862574.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 194938 195153 . - . ID=gene-VMS06_RS08360;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=VMS06_RS08360 NZ_JAVXZI010000005.1 Protein Homology CDS 194938 195153 . - 0 ID=cds-WP_001144069.1;Parent=gene-VMS06_RS08360;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=VMS06_RS08360;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 195390 196403 . + . ID=gene-VMS06_RS08365;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=VMS06_RS08365 NZ_JAVXZI010000005.1 Protein Homology CDS 195390 196403 . + 0 ID=cds-WP_048966111.1;Parent=gene-VMS06_RS08365;Dbxref=GenBank:WP_048966111.1;Name=WP_048966111.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=VMS06_RS08365;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_048966111.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 196491 197108 . - . ID=gene-VMS06_RS08370;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=VMS06_RS08370 NZ_JAVXZI010000005.1 Protein Homology CDS 196491 197108 . - 0 ID=cds-WP_023298635.1;Parent=gene-VMS06_RS08370;Dbxref=GenBank:WP_023298635.1;Name=WP_023298635.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883619.1;locus_tag=VMS06_RS08370;product=urease accessory protein UreG;protein_id=WP_023298635.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 197118 197792 . - . ID=gene-VMS06_RS08375;Name=VMS06_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08375 NZ_JAVXZI010000005.1 Protein Homology CDS 197118 197792 . - 0 ID=cds-WP_046620811.1;Parent=gene-VMS06_RS08375;Dbxref=GenBank:WP_046620811.1;Name=WP_046620811.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145405.1;locus_tag=VMS06_RS08375;product=urease accessory protein UreF;protein_id=WP_046620811.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 197792 198331 . - . ID=gene-VMS06_RS08380;Name=VMS06_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08380 NZ_JAVXZI010000005.1 Protein Homology CDS 197792 198331 . - 0 ID=cds-WP_003862561.1;Parent=gene-VMS06_RS08380;Dbxref=GenBank:WP_003862561.1;Name=WP_003862561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571909.1;locus_tag=VMS06_RS08380;product=HupE/UreJ family protein;protein_id=WP_003862561.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 198341 198805 . - . ID=gene-VMS06_RS08385;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=VMS06_RS08385 NZ_JAVXZI010000005.1 Protein Homology CDS 198341 198805 . - 0 ID=cds-WP_045308003.1;Parent=gene-VMS06_RS08385;Dbxref=GenBank:WP_045308003.1;Name=WP_045308003.1;Ontology_term=GO:0006457,GO:0019627,GO:0065003,GO:0016151;gbkey=CDS;gene=ureE;go_function=nickel cation binding|0016151||IEA;go_process=protein folding|0006457||IEA,urea metabolic process|0019627||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862559.1;locus_tag=VMS06_RS08385;product=urease accessory protein UreE;protein_id=WP_045308003.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 198815 200518 . - . ID=gene-VMS06_RS08390;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=VMS06_RS08390 NZ_JAVXZI010000005.1 Protein Homology CDS 198815 200518 . - 0 ID=cds-WP_023298631.1;Parent=gene-VMS06_RS08390;Dbxref=GenBank:WP_023298631.1;Name=WP_023298631.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228898.1;locus_tag=VMS06_RS08390;product=urease subunit alpha;protein_id=WP_023298631.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 200511 200825 . - . ID=gene-VMS06_RS08395;Name=VMS06_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08395 NZ_JAVXZI010000005.1 Protein Homology CDS 200511 200825 . - 0 ID=cds-WP_022649443.1;Parent=gene-VMS06_RS08395;Dbxref=GenBank:WP_022649443.1;Name=WP_022649443.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571906.1;locus_tag=VMS06_RS08395;product=urease subunit beta;protein_id=WP_022649443.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 200836 201138 . - . ID=gene-VMS06_RS08400;Name=VMS06_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08400 NZ_JAVXZI010000005.1 Protein Homology CDS 200836 201138 . - 0 ID=cds-WP_003862556.1;Parent=gene-VMS06_RS08400;Dbxref=GenBank:WP_003862556.1;Name=WP_003862556.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228896.1;locus_tag=VMS06_RS08400;product=urease subunit gamma;protein_id=WP_003862556.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 201149 201976 . - . ID=gene-VMS06_RS08405;Name=VMS06_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08405 NZ_JAVXZI010000005.1 Protein Homology CDS 201149 201976 . - 0 ID=cds-WP_063147899.1;Parent=gene-VMS06_RS08405;Dbxref=GenBank:WP_063147899.1;Name=WP_063147899.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071806.1;locus_tag=VMS06_RS08405;product=urease accessory protein UreD;protein_id=WP_063147899.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 202132 203598 . - . ID=gene-VMS06_RS08410;Name=VMS06_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08410 NZ_JAVXZI010000005.1 Protein Homology CDS 202132 203598 . - 0 ID=cds-WP_063841076.1;Parent=gene-VMS06_RS08410;Dbxref=GenBank:WP_063841076.1;Name=WP_063841076.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862552.1;locus_tag=VMS06_RS08410;product=MFS transporter;protein_id=WP_063841076.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 203690 204304 . - . ID=gene-VMS06_RS08415;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=VMS06_RS08415 NZ_JAVXZI010000005.1 Protein Homology CDS 203690 204304 . - 0 ID=cds-WP_022649440.1;Parent=gene-VMS06_RS08415;Dbxref=GenBank:WP_022649440.1;Name=WP_022649440.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272785.1;locus_tag=VMS06_RS08415;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_022649440.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 204412 204780 . + . ID=gene-VMS06_RS08420;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=VMS06_RS08420 NZ_JAVXZI010000005.1 Protein Homology CDS 204412 204780 . + 0 ID=cds-WP_046620800.1;Parent=gene-VMS06_RS08420;Dbxref=GenBank:WP_046620800.1;Name=WP_046620800.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000355782.1;locus_tag=VMS06_RS08420;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_046620800.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 204887 205708 . + . ID=gene-VMS06_RS08425;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=VMS06_RS08425 NZ_JAVXZI010000005.1 Protein Homology CDS 204887 205708 . + 0 ID=cds-WP_003862545.1;Parent=gene-VMS06_RS08425;Dbxref=GenBank:WP_003862545.1;Name=WP_003862545.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=VMS06_RS08425;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_003862545.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 205722 206963 . - . ID=gene-VMS06_RS08430;Name=VMS06_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08430 NZ_JAVXZI010000005.1 Protein Homology CDS 205722 206963 . - 0 ID=cds-WP_063147897.1;Parent=gene-VMS06_RS08430;Dbxref=GenBank:WP_063147897.1;Name=WP_063147897.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862543.1;locus_tag=VMS06_RS08430;product=multifunctional CCA addition/repair protein;protein_id=WP_063147897.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 207024 207644 . - . ID=gene-VMS06_RS08435;Name=VMS06_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08435 NZ_JAVXZI010000005.1 Protein Homology CDS 207024 207644 . - 0 ID=cds-WP_001303390.1;Parent=gene-VMS06_RS08435;Dbxref=GenBank:WP_001303390.1;Name=WP_001303390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462118.1;locus_tag=VMS06_RS08435;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_001303390.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 207882 209183 . + . ID=gene-VMS06_RS08440;Name=VMS06_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08440 NZ_JAVXZI010000005.1 Protein Homology CDS 207882 209183 . + 0 ID=cds-WP_063147896.1;Parent=gene-VMS06_RS08440;Dbxref=GenBank:WP_063147896.1;Name=WP_063147896.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001603778.1;locus_tag=VMS06_RS08440;product=CYTH domain-containing protein;protein_id=WP_063147896.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 209205 212060 . + . ID=gene-VMS06_RS08445;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=VMS06_RS08445 NZ_JAVXZI010000005.1 Protein Homology CDS 209205 212060 . + 0 ID=cds-WP_323630645.1;Parent=gene-VMS06_RS08445;Dbxref=GenBank:WP_323630645.1;Name=WP_323630645.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862541.1;locus_tag=VMS06_RS08445;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_323630645.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 212101 213531 . + . ID=gene-VMS06_RS08450;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=VMS06_RS08450 NZ_JAVXZI010000005.1 Protein Homology CDS 212101 213531 . + 0 ID=cds-WP_023298624.1;Parent=gene-VMS06_RS08450;Dbxref=GenBank:WP_023298624.1;Name=WP_023298624.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455299.1;locus_tag=VMS06_RS08450;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_023298624.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 213646 213942 . - . ID=gene-VMS06_RS08455;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=VMS06_RS08455 NZ_JAVXZI010000005.1 Protein Homology CDS 213646 213942 . - 0 ID=cds-WP_000566823.1;Parent=gene-VMS06_RS08455;Dbxref=GenBank:WP_000566823.1;Name=WP_000566823.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370074.1;locus_tag=VMS06_RS08455;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_000566823.1;transl_table=11 NZ_JAVXZI010000005.1 cmsearch riboswitch 214063 214213 . + . ID=id-NZ_JAVXZI010000005.1:214063..214213;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVXZI010000005.1 RefSeq gene 214319 214972 . + . ID=gene-VMS06_RS08460;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=VMS06_RS08460 NZ_JAVXZI010000005.1 Protein Homology CDS 214319 214972 . + 0 ID=cds-WP_003862538.1;Parent=gene-VMS06_RS08460;Dbxref=GenBank:WP_003862538.1;Name=WP_003862538.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228881.1;locus_tag=VMS06_RS08460;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_003862538.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 215017 216078 . - . ID=gene-VMS06_RS08465;Name=VMS06_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08465 NZ_JAVXZI010000005.1 Protein Homology CDS 215017 216078 . - 0 ID=cds-WP_063147895.1;Parent=gene-VMS06_RS08465;Dbxref=GenBank:WP_063147895.1;Name=WP_063147895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384036.1;locus_tag=VMS06_RS08465;product=type 1 fimbrial protein;protein_id=WP_063147895.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 216062 216823 . - . ID=gene-VMS06_RS08470;Name=VMS06_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08470 NZ_JAVXZI010000005.1 Protein Homology CDS 216062 216823 . - 0 ID=cds-WP_063147894.1;Parent=gene-VMS06_RS08470;Dbxref=GenBank:WP_063147894.1;Name=WP_063147894.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571895.1;locus_tag=VMS06_RS08470;product=fimbrial biogenesis chaperone;protein_id=WP_063147894.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 216833 219277 . - . ID=gene-VMS06_RS08475;Name=VMS06_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08475 NZ_JAVXZI010000005.1 Protein Homology CDS 216833 219277 . - 0 ID=cds-WP_063147893.1;Parent=gene-VMS06_RS08475;Dbxref=GenBank:WP_063147893.1;Name=WP_063147893.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384037.1;locus_tag=VMS06_RS08475;product=fimbria/pilus outer membrane usher protein;protein_id=WP_063147893.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 219354 219914 . - . ID=gene-VMS06_RS08480;Name=VMS06_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08480 NZ_JAVXZI010000005.1 Protein Homology CDS 219354 219914 . - 0 ID=cds-WP_022649431.1;Parent=gene-VMS06_RS08480;Dbxref=GenBank:WP_022649431.1;Name=WP_022649431.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571893.1;locus_tag=VMS06_RS08480;product=fimbrial protein;protein_id=WP_022649431.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 220181 220954 . - . ID=gene-VMS06_RS08485;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=VMS06_RS08485 NZ_JAVXZI010000005.1 Protein Homology CDS 220181 220954 . - 0 ID=cds-WP_023306970.1;Parent=gene-VMS06_RS08485;Dbxref=GenBank:WP_023306970.1;Name=WP_023306970.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311955.1;locus_tag=VMS06_RS08485;product=zinc transporter ZupT;protein_id=WP_023306970.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 221085 221873 . + . ID=gene-VMS06_RS08490;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=VMS06_RS08490 NZ_JAVXZI010000005.1 Protein Homology CDS 221085 221873 . + 0 ID=cds-WP_045307992.1;Parent=gene-VMS06_RS08490;Dbxref=GenBank:WP_045307992.1;Name=WP_045307992.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001356237.1;locus_tag=VMS06_RS08490;product=4%2C5-DOPA-extradiol-dioxygenase;protein_id=WP_045307992.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 221955 223115 . - . ID=gene-VMS06_RS08495;Name=VMS06_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08495 NZ_JAVXZI010000005.1 Protein Homology CDS 221955 223115 . - 0 ID=cds-WP_022649428.1;Parent=gene-VMS06_RS08495;Dbxref=GenBank:WP_022649428.1;Name=WP_022649428.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123077.1;locus_tag=VMS06_RS08495;product=glutathionylspermidine synthase family protein;protein_id=WP_022649428.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 223118 223783 . - . ID=gene-VMS06_RS08500;Name=VMS06_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08500 NZ_JAVXZI010000005.1 Protein Homology CDS 223118 223783 . - 0 ID=cds-WP_045307990.1;Parent=gene-VMS06_RS08500;Dbxref=GenBank:WP_045307990.1;Name=WP_045307990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462102.1;locus_tag=VMS06_RS08500;product=DUF1190 family protein;protein_id=WP_045307990.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 223974 225452 . - . ID=gene-VMS06_RS08505;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=VMS06_RS08505 NZ_JAVXZI010000005.1 Protein Homology CDS 223974 225452 . - 0 ID=cds-WP_063147892.1;Parent=gene-VMS06_RS08505;Dbxref=GenBank:WP_063147892.1;Name=WP_063147892.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077697.1;locus_tag=VMS06_RS08505;product=outer membrane channel protein TolC;protein_id=WP_063147892.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 225656 226288 . + . ID=gene-VMS06_RS08510;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=VMS06_RS08510 NZ_JAVXZI010000005.1 Protein Homology CDS 225656 226288 . + 0 ID=cds-WP_063147891.1;Parent=gene-VMS06_RS08510;Dbxref=GenBank:WP_063147891.1;Name=WP_063147891.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001231945.1;locus_tag=VMS06_RS08510;product=ADP-ribose diphosphatase;protein_id=WP_063147891.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 226285 226707 . + . ID=gene-VMS06_RS08515;Name=VMS06_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08515 NZ_JAVXZI010000005.1 Protein Homology CDS 226285 226707 . + 0 ID=cds-WP_003862516.1;Parent=gene-VMS06_RS08515;Dbxref=GenBank:WP_003862516.1;Name=WP_003862516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443308.1;locus_tag=VMS06_RS08515;product=DUF1249 family protein;protein_id=WP_003862516.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 226735 227562 . + . ID=gene-VMS06_RS08520;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=VMS06_RS08520 NZ_JAVXZI010000005.1 Protein Homology CDS 226735 227562 . + 0 ID=cds-WP_022649424.1;Parent=gene-VMS06_RS08520;Dbxref=GenBank:WP_022649424.1;Name=WP_022649424.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228873.1;locus_tag=VMS06_RS08520;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_022649424.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 227562 228143 . + . ID=gene-VMS06_RS08525;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=VMS06_RS08525 NZ_JAVXZI010000005.1 Protein Homology CDS 227562 228143 . + 0 ID=cds-WP_023306967.1;Parent=gene-VMS06_RS08525;Dbxref=GenBank:WP_023306967.1;Name=WP_023306967.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571888.1;locus_tag=VMS06_RS08525;product=esterase YqiA;protein_id=WP_023306967.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 228172 230064 . + . ID=gene-VMS06_RS08530;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=VMS06_RS08530 NZ_JAVXZI010000005.1 Protein Homology CDS 228172 230064 . + 0 ID=cds-WP_023306966.1;Parent=gene-VMS06_RS08530;Dbxref=GenBank:WP_023306966.1;Name=WP_023306966.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811978.1;locus_tag=VMS06_RS08530;product=DNA topoisomerase IV subunit B;protein_id=WP_023306966.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 230191 232320 . - . ID=gene-VMS06_RS08535;Name=VMS06_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08535 NZ_JAVXZI010000005.1 Protein Homology CDS 230191 232320 . - 0 ID=cds-WP_048966408.1;Parent=gene-VMS06_RS08535;Dbxref=GenBank:WP_048966408.1;Name=WP_048966408.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311944.1;locus_tag=VMS06_RS08535;product=TonB-dependent siderophore receptor;protein_id=WP_048966408.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 232705 233517 . + . ID=gene-VMS06_RS08540;Name=VMS06_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08540 NZ_JAVXZI010000005.1 Protein Homology CDS 232705 233517 . + 0 ID=cds-WP_023306964.1;Parent=gene-VMS06_RS08540;Dbxref=GenBank:WP_023306964.1;Name=WP_023306964.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384046.1;locus_tag=VMS06_RS08540;product=ABC transporter ATP-binding protein;protein_id=WP_023306964.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 233514 234497 . + . ID=gene-VMS06_RS08545;Name=VMS06_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08545 NZ_JAVXZI010000005.1 Protein Homology CDS 233514 234497 . + 0 ID=cds-WP_022649420.1;Parent=gene-VMS06_RS08545;Dbxref=GenBank:WP_022649420.1;Name=WP_022649420.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016234921.1;locus_tag=VMS06_RS08545;product=FecCD family ABC transporter permease;protein_id=WP_022649420.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 234494 235534 . + . ID=gene-VMS06_RS08550;Name=VMS06_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08550 NZ_JAVXZI010000005.1 Protein Homology CDS 234494 235534 . + 0 ID=cds-WP_038416737.1;Parent=gene-VMS06_RS08550;Dbxref=GenBank:WP_038416737.1;Name=WP_038416737.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502981.1;locus_tag=VMS06_RS08550;product=FecCD family ABC transporter permease;protein_id=WP_038416737.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 235544 236494 . + . ID=gene-VMS06_RS08555;Name=VMS06_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08555 NZ_JAVXZI010000005.1 Protein Homology CDS 235544 236494 . + 0 ID=cds-WP_063147890.1;Parent=gene-VMS06_RS08555;Dbxref=GenBank:WP_063147890.1;Name=WP_063147890.1;Ontology_term=GO:0015891,GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571884.1;locus_tag=VMS06_RS08555;product=iron-siderophore ABC transporter substrate-binding protein;protein_id=WP_063147890.1;transl_table=11 NZ_JAVXZI010000005.1 RefSeq gene 236491 237366 . + . ID=gene-VMS06_RS08560;Name=VMS06_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08560 NZ_JAVXZI010000005.1 Protein Homology CDS 236491 237366 . + 0 ID=cds-WP_015571883.1;Parent=gene-VMS06_RS08560;Dbxref=GenBank:WP_015571883.1;Name=WP_015571883.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571883.1;locus_tag=VMS06_RS08560;product=MurR/RpiR family transcriptional regulator;protein_id=WP_015571883.1;transl_table=11 ##sequence-region NZ_JAVXZI010000006.1 1 219291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000006.1 RefSeq region 1 219291 . + . ID=NZ_JAVXZI010000006.1:1..219291;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000006.1 RefSeq gene 1 3094 . - . ID=gene-VMS06_RS08565;Name=VMS06_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08565;partial=true;start_range=.,1 NZ_JAVXZI010000006.1 Protein Homology CDS 1 3094 . - 0 ID=cds-WP_323630647.1;Parent=gene-VMS06_RS08565;Dbxref=GenBank:WP_323630647.1;Name=WP_323630647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170525.1;locus_tag=VMS06_RS08565;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_323630647.1;start_range=.,1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 3098 3538 . - . ID=gene-VMS06_RS08570;Name=VMS06_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08570 NZ_JAVXZI010000006.1 Protein Homology CDS 3098 3538 . - 0 ID=cds-WP_045308288.1;Parent=gene-VMS06_RS08570;Dbxref=GenBank:WP_045308288.1;Name=WP_045308288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882307.1;locus_tag=VMS06_RS08570;product=DcrB-related protein;protein_id=WP_045308288.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 3615 4691 . - . ID=gene-VMS06_RS08575;Name=VMS06_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08575 NZ_JAVXZI010000006.1 Protein Homology CDS 3615 4691 . - 0 ID=cds-WP_063147836.1;Parent=gene-VMS06_RS08575;Dbxref=GenBank:WP_063147836.1;Name=WP_063147836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882306.1;locus_tag=VMS06_RS08575;product=hypothetical protein;protein_id=WP_063147836.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 4751 5248 . - . ID=gene-VMS06_RS08580;Name=VMS06_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08580 NZ_JAVXZI010000006.1 GeneMarkS-2+ CDS 4751 5248 . - 0 ID=cds-WP_323630648.1;Parent=gene-VMS06_RS08580;Dbxref=GenBank:WP_323630648.1;Name=WP_323630648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS08580;product=hypothetical protein;protein_id=WP_323630648.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 5324 5836 . - . ID=gene-VMS06_RS08585;Name=VMS06_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08585 NZ_JAVXZI010000006.1 Protein Homology CDS 5324 5836 . - 0 ID=cds-WP_046619505.1;Parent=gene-VMS06_RS08585;Dbxref=GenBank:WP_046619505.1;Name=WP_046619505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026230.1;locus_tag=VMS06_RS08585;product=hypothetical protein;protein_id=WP_046619505.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 5817 8357 . - . ID=gene-VMS06_RS08590;Name=VMS06_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08590 NZ_JAVXZI010000006.1 Protein Homology CDS 5817 8357 . - 0 ID=cds-WP_129008814.1;Parent=gene-VMS06_RS08590;Dbxref=GenBank:WP_129008814.1;Name=WP_129008814.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013026231.1;locus_tag=VMS06_RS08590;product=type VI secretion system Vgr family protein;protein_id=WP_129008814.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 8422 8859 . - . ID=gene-VMS06_RS08595;Name=VMS06_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08595 NZ_JAVXZI010000006.1 Protein Homology CDS 8422 8859 . - 0 ID=cds-WP_225303296.1;Parent=gene-VMS06_RS08595;Dbxref=GenBank:WP_225303296.1;Name=WP_225303296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810936.1;locus_tag=VMS06_RS08595;product=hypothetical protein;protein_id=WP_225303296.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 9224 10294 . - . ID=gene-VMS06_RS08600;Name=tri1;gbkey=Gene;gene=tri1;gene_biotype=protein_coding;locus_tag=VMS06_RS08600 NZ_JAVXZI010000006.1 Protein Homology CDS 9224 10294 . - 0 ID=cds-WP_063148487.1;Parent=gene-VMS06_RS08600;Dbxref=GenBank:WP_063148487.1;Name=WP_063148487.1;Ontology_term=GO:0003875;gbkey=CDS;gene=tri1;go_function=ADP-ribosylarginine hydrolase activity|0003875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883476.1;locus_tag=VMS06_RS08600;product=ADP-ribosylarginine hydrolase Tri1;protein_id=WP_063148487.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 10291 11625 . - . ID=gene-VMS06_RS08605;Name=VMS06_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08605 NZ_JAVXZI010000006.1 Protein Homology CDS 10291 11625 . - 0 ID=cds-WP_063148488.1;Parent=gene-VMS06_RS08605;Dbxref=GenBank:WP_063148488.1;Name=WP_063148488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170532.1;locus_tag=VMS06_RS08605;product=PAAR domain-containing protein;protein_id=WP_063148488.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 11628 12422 . - . ID=gene-VMS06_RS08610;Name=VMS06_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08610 NZ_JAVXZI010000006.1 Protein Homology CDS 11628 12422 . - 0 ID=cds-WP_063148490.1;Parent=gene-VMS06_RS08610;Dbxref=GenBank:WP_063148490.1;Name=WP_063148490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384286.1;locus_tag=VMS06_RS08610;product=DcrB-related protein;protein_id=WP_063148490.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 12434 14362 . - . ID=gene-VMS06_RS08615;Name=VMS06_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08615 NZ_JAVXZI010000006.1 Protein Homology CDS 12434 14362 . - 0 ID=cds-WP_129008816.1;Parent=gene-VMS06_RS08615;Dbxref=GenBank:WP_129008816.1;Name=WP_129008816.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096197.1;locus_tag=VMS06_RS08615;product=type VI secretion system Vgr family protein;protein_id=WP_129008816.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 14447 14863 . - . ID=gene-VMS06_RS08620;Name=VMS06_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08620 NZ_JAVXZI010000006.1 Protein Homology CDS 14447 14863 . - 0 ID=cds-WP_223862212.1;Parent=gene-VMS06_RS08620;Dbxref=GenBank:WP_223862212.1;Name=WP_223862212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810939.1;locus_tag=VMS06_RS08620;product=hypothetical protein;protein_id=WP_223862212.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 14916 15662 . - . ID=gene-VMS06_RS08625;Name=VMS06_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08625 NZ_JAVXZI010000006.1 Protein Homology CDS 14916 15662 . - 0 ID=cds-WP_063146375.1;Parent=gene-VMS06_RS08625;Dbxref=GenBank:WP_063146375.1;Name=WP_063146375.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570341.1;locus_tag=VMS06_RS08625;product=ankyrin repeat domain-containing protein;protein_id=WP_063146375.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 15674 17140 . - . ID=gene-VMS06_RS08630;Name=VMS06_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08630 NZ_JAVXZI010000006.1 Protein Homology CDS 15674 17140 . - 0 ID=cds-WP_063147834.1;Parent=gene-VMS06_RS08630;Dbxref=GenBank:WP_063147834.1;Name=WP_063147834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432872.1;locus_tag=VMS06_RS08630;product=Tle-like phospholipase domain-containing protein;protein_id=WP_063147834.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 17166 18599 . - . ID=gene-VMS06_RS08635;Name=VMS06_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08635 NZ_JAVXZI010000006.1 Protein Homology CDS 17166 18599 . - 0 ID=cds-WP_023306450.1;Parent=gene-VMS06_RS08635;Dbxref=GenBank:WP_023306450.1;Name=WP_023306450.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570340.1;locus_tag=VMS06_RS08635;product=serine/threonine protein kinase;protein_id=WP_023306450.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 18624 21239 . - . ID=gene-VMS06_RS08640;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=VMS06_RS08640 NZ_JAVXZI010000006.1 Protein Homology CDS 18624 21239 . - 0 ID=cds-WP_063843769.1;Parent=gene-VMS06_RS08640;Dbxref=GenBank:WP_063843769.1;Name=WP_063843769.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014729902.1;locus_tag=VMS06_RS08640;product=type VI secretion system ATPase TssH;protein_id=WP_063843769.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 21278 22321 . - . ID=gene-VMS06_RS08645;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=VMS06_RS08645 NZ_JAVXZI010000006.1 Protein Homology CDS 21278 22321 . - 0 ID=cds-WP_063147833.1;Parent=gene-VMS06_RS08645;Dbxref=GenBank:WP_063147833.1;Name=WP_063147833.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810944.1;locus_tag=VMS06_RS08645;product=type VI secretion system baseplate subunit TssG;protein_id=WP_063147833.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 22318 24189 . - . ID=gene-VMS06_RS08650;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=VMS06_RS08650 NZ_JAVXZI010000006.1 Protein Homology CDS 22318 24189 . - 0 ID=cds-WP_063146339.1;Parent=gene-VMS06_RS08650;Dbxref=GenBank:WP_063146339.1;Name=WP_063146339.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884222.1;locus_tag=VMS06_RS08650;product=type VI secretion system baseplate subunit TssF;protein_id=WP_063146339.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 24192 24755 . - . ID=gene-VMS06_RS08655;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=VMS06_RS08655 NZ_JAVXZI010000006.1 Protein Homology CDS 24192 24755 . - 0 ID=cds-WP_015570336.1;Parent=gene-VMS06_RS08655;Dbxref=GenBank:WP_015570336.1;Name=WP_015570336.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570336.1;locus_tag=VMS06_RS08655;product=type VI secretion system baseplate subunit TssE;protein_id=WP_015570336.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 24748 25560 . - . ID=gene-VMS06_RS08660;Name=VMS06_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08660 NZ_JAVXZI010000006.1 Protein Homology CDS 24748 25560 . - 0 ID=cds-WP_022648404.1;Parent=gene-VMS06_RS08660;Dbxref=GenBank:WP_022648404.1;Name=WP_022648404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384294.1;locus_tag=VMS06_RS08660;product=type VI secretion system accessory protein TagJ;protein_id=WP_022648404.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 25570 26562 . - . ID=gene-VMS06_RS08665;Name=VMS06_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08665 NZ_JAVXZI010000006.1 Protein Homology CDS 25570 26562 . - 0 ID=cds-WP_063147832.1;Parent=gene-VMS06_RS08665;Dbxref=GenBank:WP_063147832.1;Name=WP_063147832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096186.1;locus_tag=VMS06_RS08665;product=hypothetical protein;protein_id=WP_063147832.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 26579 27376 . - . ID=gene-VMS06_RS08670;Name=VMS06_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08670 NZ_JAVXZI010000006.1 Protein Homology CDS 26579 27376 . - 0 ID=cds-WP_003859969.1;Parent=gene-VMS06_RS08670;Dbxref=GenBank:WP_003859969.1;Name=WP_003859969.1;Ontology_term=GO:0006470,GO:0004722,GO:0046872;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA,metal ion binding|0046872||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884226.1;locus_tag=VMS06_RS08670;product=PP2C family protein-serine/threonine phosphatase;protein_id=WP_003859969.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 27373 29148 . - . ID=gene-VMS06_RS08675;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=VMS06_RS08675 NZ_JAVXZI010000006.1 Protein Homology CDS 27373 29148 . - 0 ID=cds-WP_032624080.1;Parent=gene-VMS06_RS08675;Dbxref=GenBank:WP_032624080.1;Name=WP_032624080.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tagH;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384296.1;locus_tag=VMS06_RS08675;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_032624080.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 29239 29661 . - . ID=gene-VMS06_RS08680;Name=VMS06_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08680 NZ_JAVXZI010000006.1 Protein Homology CDS 29239 29661 . - 0 ID=cds-WP_063147831.1;Parent=gene-VMS06_RS08680;Dbxref=GenBank:WP_063147831.1;Name=WP_063147831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570334.1;locus_tag=VMS06_RS08680;product=hypothetical protein;protein_id=WP_063147831.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 29666 30058 . - . ID=gene-VMS06_RS08685;Name=VMS06_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08685 NZ_JAVXZI010000006.1 GeneMarkS-2+ CDS 29666 30058 . - 0 ID=cds-WP_032628301.1;Parent=gene-VMS06_RS08685;Dbxref=GenBank:WP_032628301.1;Name=WP_032628301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS08685;product=hypothetical protein;protein_id=WP_032628301.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 30059 31075 . - . ID=gene-VMS06_RS08690;Name=VMS06_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08690 NZ_JAVXZI010000006.1 Protein Homology CDS 30059 31075 . - 0 ID=cds-WP_023306455.1;Parent=gene-VMS06_RS08690;Dbxref=GenBank:WP_023306455.1;Name=WP_023306455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810951.1;locus_tag=VMS06_RS08690;product=hypothetical protein;protein_id=WP_023306455.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 31205 31435 . - . ID=gene-VMS06_RS08695;Name=VMS06_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08695 NZ_JAVXZI010000006.1 GeneMarkS-2+ CDS 31205 31435 . - 0 ID=cds-WP_123906481.1;Parent=gene-VMS06_RS08695;Dbxref=GenBank:WP_123906481.1;Name=WP_123906481.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS08695;product=hypothetical protein;protein_id=WP_123906481.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 31676 32158 . - . ID=gene-VMS06_RS08700;Name=VMS06_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08700 NZ_JAVXZI010000006.1 Protein Homology CDS 31676 32158 . - 0 ID=cds-WP_014884229.1;Parent=gene-VMS06_RS08700;Dbxref=GenBank:WP_014884229.1;Name=WP_014884229.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366565.1;locus_tag=VMS06_RS08700;product=Hcp family type VI secretion system effector;protein_id=WP_014884229.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 32339 32788 . - . ID=gene-VMS06_RS08705;Name=VMS06_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08705 NZ_JAVXZI010000006.1 Protein Homology CDS 32339 32788 . - 0 ID=cds-WP_063147830.1;Parent=gene-VMS06_RS08705;Dbxref=GenBank:WP_063147830.1;Name=WP_063147830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432839.1;locus_tag=VMS06_RS08705;product=T6SS amidase immunity protein Tai4 family protein;protein_id=WP_063147830.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 32773 33267 . - . ID=gene-VMS06_RS08710;Name=VMS06_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08710 NZ_JAVXZI010000006.1 Protein Homology CDS 32773 33267 . - 0 ID=cds-WP_063147829.1;Parent=gene-VMS06_RS08710;Dbxref=GenBank:WP_063147829.1;Name=WP_063147829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432836.1;locus_tag=VMS06_RS08710;product=T6SS effector amidase Tae4 family protein;protein_id=WP_063147829.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 33271 33696 . - . ID=gene-VMS06_RS08715;Name=VMS06_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08715 NZ_JAVXZI010000006.1 Protein Homology CDS 33271 33696 . - 0 ID=cds-WP_038416233.1;Parent=gene-VMS06_RS08715;Dbxref=GenBank:WP_038416233.1;Name=WP_038416233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016495655.1;locus_tag=VMS06_RS08715;product=Rap1a/Tai family immunity protein;protein_id=WP_038416233.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 33776 35275 . - . ID=gene-VMS06_RS08720;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=VMS06_RS08720 NZ_JAVXZI010000006.1 Protein Homology CDS 33776 35275 . - 0 ID=cds-WP_006810956.1;Parent=gene-VMS06_RS08720;Dbxref=GenBank:WP_006810956.1;Name=WP_006810956.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832326.1;locus_tag=VMS06_RS08720;product=type VI secretion system contractile sheath large subunit;protein_id=WP_006810956.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 35279 35803 . - . ID=gene-VMS06_RS08725;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=VMS06_RS08725 NZ_JAVXZI010000006.1 Protein Homology CDS 35279 35803 . - 0 ID=cds-WP_022648413.1;Parent=gene-VMS06_RS08725;Dbxref=GenBank:WP_022648413.1;Name=WP_022648413.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884233.1;locus_tag=VMS06_RS08725;product=type VI secretion system contractile sheath small subunit;protein_id=WP_022648413.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 35879 36895 . - . ID=gene-VMS06_RS08730;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=VMS06_RS08730 NZ_JAVXZI010000006.1 Protein Homology CDS 35879 36895 . - 0 ID=cds-WP_063147828.1;Parent=gene-VMS06_RS08730;Dbxref=GenBank:WP_063147828.1;Name=WP_063147828.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859964.1;locus_tag=VMS06_RS08730;product=type VI secretion system protein TssA;protein_id=WP_063147828.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 36907 37623 . - . ID=gene-VMS06_RS08735;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=VMS06_RS08735 NZ_JAVXZI010000006.1 Protein Homology CDS 36907 37623 . - 0 ID=cds-WP_006810959.1;Parent=gene-VMS06_RS08735;Dbxref=GenBank:WP_006810959.1;Name=WP_006810959.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432823.1;locus_tag=VMS06_RS08735;product=type VI secretion system-associated protein TagF;protein_id=WP_006810959.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 37640 41260 . - . ID=gene-VMS06_RS08740;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=VMS06_RS08740 NZ_JAVXZI010000006.1 Protein Homology CDS 37640 41260 . - 0 ID=cds-WP_063147827.1;Parent=gene-VMS06_RS08740;Dbxref=GenBank:WP_063147827.1;Name=WP_063147827.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883456.1;locus_tag=VMS06_RS08740;product=type VI secretion system membrane subunit TssM;protein_id=WP_063147827.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 41263 42501 . - . ID=gene-VMS06_RS08745;Name=VMS06_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08745 NZ_JAVXZI010000006.1 Protein Homology CDS 41263 42501 . - 0 ID=cds-WP_003859963.1;Parent=gene-VMS06_RS08745;Dbxref=GenBank:WP_003859963.1;Name=WP_003859963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502648.1;locus_tag=VMS06_RS08745;product=DotU family type VI secretion system protein;protein_id=WP_003859963.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 42519 43862 . - . ID=gene-VMS06_RS08750;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=VMS06_RS08750 NZ_JAVXZI010000006.1 Protein Homology CDS 42519 43862 . - 0 ID=cds-WP_022648417.1;Parent=gene-VMS06_RS08750;Dbxref=GenBank:WP_022648417.1;Name=WP_022648417.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384304.1;locus_tag=VMS06_RS08750;product=type VI secretion system baseplate subunit TssK;protein_id=WP_022648417.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 43891 44394 . - . ID=gene-VMS06_RS08755;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=VMS06_RS08755 NZ_JAVXZI010000006.1 Protein Homology CDS 43891 44394 . - 0 ID=cds-WP_022648418.1;Parent=gene-VMS06_RS08755;Dbxref=GenBank:WP_022648418.1;Name=WP_022648418.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502650.1;locus_tag=VMS06_RS08755;product=type VI secretion system lipoprotein TssJ;protein_id=WP_022648418.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 44418 44912 . - . ID=gene-VMS06_RS08760;Name=VMS06_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08760 NZ_JAVXZI010000006.1 Protein Homology CDS 44418 44912 . - 0 ID=cds-WP_063147826.1;Parent=gene-VMS06_RS08760;Dbxref=GenBank:WP_063147826.1;Name=WP_063147826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170557.1;locus_tag=VMS06_RS08760;product=hypothetical protein;protein_id=WP_063147826.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 45842 46822 . + . ID=gene-VMS06_RS08765;Name=VMS06_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08765 NZ_JAVXZI010000006.1 Protein Homology CDS 45842 46822 . + 0 ID=cds-WP_063147825.1;Parent=gene-VMS06_RS08765;Dbxref=GenBank:WP_063147825.1;Name=WP_063147825.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850464.1;locus_tag=VMS06_RS08765;product=GlxA family transcriptional regulator;protein_id=WP_063147825.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 46901 47911 . + . ID=gene-VMS06_RS08770;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=VMS06_RS08770 NZ_JAVXZI010000006.1 Protein Homology CDS 46901 47911 . + 0 ID=cds-WP_023306461.1;Parent=gene-VMS06_RS08770;Dbxref=GenBank:WP_023306461.1;Name=WP_023306461.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384305.1;locus_tag=VMS06_RS08770;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_023306461.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 48125 49807 . + . ID=gene-VMS06_RS08775;Name=VMS06_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08775 NZ_JAVXZI010000006.1 Protein Homology CDS 48125 49807 . + 0 ID=cds-WP_045623225.1;Parent=gene-VMS06_RS08775;Dbxref=GenBank:WP_045623225.1;Name=WP_045623225.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810968.1;locus_tag=VMS06_RS08775;product=alpha%2Calpha-trehalase;protein_id=WP_045623225.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 49880 51982 . - . ID=gene-VMS06_RS08780;Name=VMS06_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08780 NZ_JAVXZI010000006.1 Protein Homology CDS 49880 51982 . - 0 ID=cds-WP_063147824.1;Parent=gene-VMS06_RS08780;Dbxref=GenBank:WP_063147824.1;Name=WP_063147824.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810969.1;locus_tag=VMS06_RS08780;product=TonB-dependent siderophore receptor;protein_id=WP_063147824.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 52143 52874 . + . ID=gene-VMS06_RS08785;Name=ycgR;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=VMS06_RS08785 NZ_JAVXZI010000006.1 Protein Homology CDS 52143 52874 . + 0 ID=cds-WP_022648423.1;Parent=gene-VMS06_RS08785;Dbxref=GenBank:WP_022648423.1;Name=WP_022648423.1;Ontology_term=GO:0071945,GO:0035438;gbkey=CDS;gene=ycgR;go_function=cyclic-di-GMP binding|0035438||IEA;go_process=regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed|0071945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810970.1;locus_tag=VMS06_RS08785;product=flagellar brake protein YcgR;protein_id=WP_022648423.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 52912 53523 . - . ID=gene-VMS06_RS08790;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=VMS06_RS08790 NZ_JAVXZI010000006.1 Protein Homology CDS 52912 53523 . - 0 ID=cds-WP_022648424.1;Parent=gene-VMS06_RS08790;Dbxref=GenBank:WP_022648424.1;Name=WP_022648424.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460755.1;locus_tag=VMS06_RS08790;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_022648424.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 53631 54545 . + . ID=gene-VMS06_RS08795;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=VMS06_RS08795 NZ_JAVXZI010000006.1 Protein Homology CDS 53631 54545 . + 0 ID=cds-WP_063147823.1;Parent=gene-VMS06_RS08795;Dbxref=GenBank:WP_063147823.1;Name=WP_063147823.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384311.1;locus_tag=VMS06_RS08795;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_063147823.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq pseudogene 54643 56310 . + . ID=gene-VMS06_RS08800;Name=VMS06_RS08800;end_range=56310,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS08800;partial=true;pseudo=true NZ_JAVXZI010000006.1 Protein Homology CDS 54643 56310 . + 0 ID=cds-VMS06_RS08800;Parent=gene-VMS06_RS08800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0051139,GO:0016020;end_range=56310,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF003714.0;locus_tag=VMS06_RS08800;partial=true;product=potassium/proton antiporter;pseudo=true;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 56471 57541 . - . ID=gene-VMS06_RS08805;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=VMS06_RS08805 NZ_JAVXZI010000006.1 Protein Homology CDS 56471 57541 . - 0 ID=cds-WP_022648427.1;Parent=gene-VMS06_RS08805;Dbxref=GenBank:WP_022648427.1;Name=WP_022648427.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309712.2;locus_tag=VMS06_RS08805;product=catabolic alanine racemase DadX;protein_id=WP_022648427.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 57551 58849 . - . ID=gene-VMS06_RS08810;Name=VMS06_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08810 NZ_JAVXZI010000006.1 Protein Homology CDS 57551 58849 . - 0 ID=cds-WP_063147822.1;Parent=gene-VMS06_RS08810;Dbxref=GenBank:WP_063147822.1;Name=WP_063147822.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460759.1;locus_tag=VMS06_RS08810;product=D-amino acid dehydrogenase;protein_id=WP_063147822.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 59171 60703 . + . ID=gene-VMS06_RS08815;Name=VMS06_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08815 NZ_JAVXZI010000006.1 Protein Homology CDS 59171 60703 . + 0 ID=cds-WP_048966754.1;Parent=gene-VMS06_RS08815;Dbxref=GenBank:WP_048966754.1;Name=WP_048966754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309710.1;locus_tag=VMS06_RS08815;product=SpoVR family protein;protein_id=WP_048966754.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 60816 61535 . - . ID=gene-VMS06_RS08820;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=VMS06_RS08820 NZ_JAVXZI010000006.1 Protein Homology CDS 60816 61535 . - 0 ID=cds-WP_003859951.1;Parent=gene-VMS06_RS08820;Dbxref=GenBank:WP_003859951.1;Name=WP_003859951.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309709.1;locus_tag=VMS06_RS08820;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_003859951.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 61738 63276 . + . ID=gene-VMS06_RS08825;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=VMS06_RS08825 NZ_JAVXZI010000006.1 Protein Homology CDS 61738 63276 . + 0 ID=cds-WP_023306467.1;Parent=gene-VMS06_RS08825;Dbxref=GenBank:WP_023306467.1;Name=WP_023306467.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432734.1;locus_tag=VMS06_RS08825;product=Na(+)/H(+) antiporter NhaB;protein_id=WP_023306467.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 63323 63853 . + . ID=gene-VMS06_RS08830;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=VMS06_RS08830 NZ_JAVXZI010000006.1 Protein Homology CDS 63323 63853 . + 0 ID=cds-WP_032622423.1;Parent=gene-VMS06_RS08830;Dbxref=GenBank:WP_032622423.1;Name=WP_032622423.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227625.1;locus_tag=VMS06_RS08830;product=disulfide bond formation protein DsbB;protein_id=WP_032622423.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 63953 64393 . - . ID=gene-VMS06_RS08835;Name=VMS06_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08835 NZ_JAVXZI010000006.1 Protein Homology CDS 63953 64393 . - 0 ID=cds-WP_022648432.1;Parent=gene-VMS06_RS08835;Dbxref=GenBank:WP_022648432.1;Name=WP_022648432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432728.1;locus_tag=VMS06_RS08835;product=YcgN family cysteine cluster protein;protein_id=WP_022648432.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 64487 65146 . - . ID=gene-VMS06_RS08840;Name=VMS06_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08840 NZ_JAVXZI010000006.1 Protein Homology CDS 64487 65146 . - 0 ID=cds-WP_022648433.1;Parent=gene-VMS06_RS08840;Dbxref=GenBank:WP_022648433.1;Name=WP_022648433.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859945.1;locus_tag=VMS06_RS08840;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_022648433.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 65194 65469 . - . ID=gene-VMS06_RS08845;Name=VMS06_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08845 NZ_JAVXZI010000006.1 Protein Homology CDS 65194 65469 . - 0 ID=cds-WP_006810982.1;Parent=gene-VMS06_RS08845;Dbxref=GenBank:WP_006810982.1;Name=WP_006810982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883434.1;locus_tag=VMS06_RS08845;product=YcgL domain-containing protein;protein_id=WP_006810982.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 65593 66300 . + . ID=gene-VMS06_RS08850;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=VMS06_RS08850 NZ_JAVXZI010000006.1 Protein Homology CDS 65593 66300 . + 0 ID=cds-WP_015570311.1;Parent=gene-VMS06_RS08850;Dbxref=GenBank:WP_015570311.1;Name=WP_015570311.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309697.1;locus_tag=VMS06_RS08850;product=septum site-determining protein MinC;protein_id=WP_015570311.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 66323 67135 . + . ID=gene-VMS06_RS08855;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=VMS06_RS08855 NZ_JAVXZI010000006.1 Protein Homology CDS 66323 67135 . + 0 ID=cds-WP_003859938.1;Parent=gene-VMS06_RS08855;Dbxref=GenBank:WP_003859938.1;Name=WP_003859938.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=VMS06_RS08855;product=septum site-determining protein MinD;protein_id=WP_003859938.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 67139 67405 . + . ID=gene-VMS06_RS08860;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=VMS06_RS08860 NZ_JAVXZI010000006.1 Protein Homology CDS 67139 67405 . + 0 ID=cds-WP_003859937.1;Parent=gene-VMS06_RS08860;Dbxref=GenBank:WP_003859937.1;Name=WP_003859937.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460772.1;locus_tag=VMS06_RS08860;product=cell division topological specificity factor MinE;protein_id=WP_003859937.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 67492 68607 . - . ID=gene-VMS06_RS08865;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=VMS06_RS08865 NZ_JAVXZI010000006.1 Protein Homology CDS 67492 68607 . - 0 ID=cds-WP_123059168.1;Parent=gene-VMS06_RS08865;Dbxref=GenBank:WP_123059168.1;Name=WP_123059168.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707318.2;locus_tag=VMS06_RS08865;product=ribonuclease D;protein_id=WP_123059168.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 68691 70376 . - . ID=gene-VMS06_RS08870;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=VMS06_RS08870 NZ_JAVXZI010000006.1 Protein Homology CDS 68691 70376 . - 0 ID=cds-WP_074136346.1;Parent=gene-VMS06_RS08870;Dbxref=GenBank:WP_074136346.1;Name=WP_074136346.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416319.1;locus_tag=VMS06_RS08870;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_074136346.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 70580 71161 . - . ID=gene-VMS06_RS08875;Name=VMS06_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08875 NZ_JAVXZI010000006.1 Protein Homology CDS 70580 71161 . - 0 ID=cds-WP_023300347.1;Parent=gene-VMS06_RS08875;Dbxref=GenBank:WP_023300347.1;Name=WP_023300347.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416320.1;locus_tag=VMS06_RS08875;product=Slp family lipoprotein;protein_id=WP_023300347.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 71199 71894 . - . ID=gene-VMS06_RS08880;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=VMS06_RS08880 NZ_JAVXZI010000006.1 Protein Homology CDS 71199 71894 . - 0 ID=cds-WP_023300348.1;Parent=gene-VMS06_RS08880;Dbxref=GenBank:WP_023300348.1;Name=WP_023300348.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227637.1;locus_tag=VMS06_RS08880;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_023300348.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 71961 73871 . - . ID=gene-VMS06_RS08885;Name=VMS06_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08885 NZ_JAVXZI010000006.1 Protein Homology CDS 71961 73871 . - 0 ID=cds-WP_023300349.1;Parent=gene-VMS06_RS08885;Dbxref=GenBank:WP_023300349.1;Name=WP_023300349.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227638.1;locus_tag=VMS06_RS08885;product=DNA repair helicase YoaA;protein_id=WP_023300349.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 74005 74349 . + . ID=gene-VMS06_RS08890;Name=VMS06_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08890 NZ_JAVXZI010000006.1 Protein Homology CDS 74005 74349 . + 0 ID=cds-WP_022648440.1;Parent=gene-VMS06_RS08890;Dbxref=GenBank:WP_022648440.1;Name=WP_022648440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227639.1;locus_tag=VMS06_RS08890;product=RidA family protein;protein_id=WP_022648440.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 74356 74535 . - . ID=gene-VMS06_RS08895;Name=VMS06_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08895 NZ_JAVXZI010000006.1 Protein Homology CDS 74356 74535 . - 0 ID=cds-WP_022648441.1;Parent=gene-VMS06_RS08895;Dbxref=GenBank:WP_022648441.1;Name=WP_022648441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460779.1;locus_tag=VMS06_RS08895;product=YoaH family protein;protein_id=WP_022648441.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 74597 75931 . + . ID=gene-VMS06_RS08900;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=VMS06_RS08900 NZ_JAVXZI010000006.1 Protein Homology CDS 74597 75931 . + 0 ID=cds-WP_063147820.1;Parent=gene-VMS06_RS08900;Dbxref=GenBank:WP_063147820.1;Name=WP_063147820.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693261.1;locus_tag=VMS06_RS08900;product=aminodeoxychorismate synthase component 1;protein_id=WP_063147820.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 75928 76506 . + . ID=gene-VMS06_RS08905;Name=VMS06_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08905 NZ_JAVXZI010000006.1 Protein Homology CDS 75928 76506 . + 0 ID=cds-WP_022648443.1;Parent=gene-VMS06_RS08905;Dbxref=GenBank:WP_022648443.1;Name=WP_022648443.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170594.1;locus_tag=VMS06_RS08905;product=CoA pyrophosphatase;protein_id=WP_022648443.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 76691 78055 . + . ID=gene-VMS06_RS08910;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=VMS06_RS08910 NZ_JAVXZI010000006.1 Protein Homology CDS 76691 78055 . + 0 ID=cds-WP_022648444.1;Parent=gene-VMS06_RS08910;Dbxref=GenBank:WP_022648444.1;Name=WP_022648444.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227643.1;locus_tag=VMS06_RS08910;product=L-serine ammonia-lyase;protein_id=WP_022648444.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 78186 79784 . + . ID=gene-VMS06_RS08915;Name=VMS06_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08915 NZ_JAVXZI010000006.1 Protein Homology CDS 78186 79784 . + 0 ID=cds-WP_023300353.1;Parent=gene-VMS06_RS08915;Dbxref=GenBank:WP_023300353.1;Name=WP_023300353.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859918.1;locus_tag=VMS06_RS08915;product=EAL domain-containing protein;protein_id=WP_023300353.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 79791 81350 . - . ID=gene-VMS06_RS08920;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=VMS06_RS08920 NZ_JAVXZI010000006.1 Protein Homology CDS 79791 81350 . - 0 ID=cds-WP_023300354.1;Parent=gene-VMS06_RS08920;Dbxref=GenBank:WP_023300354.1;Name=WP_023300354.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707306.1;locus_tag=VMS06_RS08920;product=CNNM family cation transport protein YoaE;protein_id=WP_023300354.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 81814 82776 . + . ID=gene-VMS06_RS08925;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=VMS06_RS08925 NZ_JAVXZI010000006.1 Protein Homology CDS 81814 82776 . + 0 ID=cds-WP_022651434.1;Parent=gene-VMS06_RS08925;Dbxref=GenBank:WP_022651434.1;Name=WP_022651434.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227647.1;locus_tag=VMS06_RS08925;product=PTS mannose transporter subunit IIAB;protein_id=WP_022651434.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 82824 83624 . + . ID=gene-VMS06_RS08930;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;locus_tag=VMS06_RS08930 NZ_JAVXZI010000006.1 Protein Homology CDS 82824 83624 . + 0 ID=cds-WP_022648448.1;Parent=gene-VMS06_RS08930;Dbxref=GenBank:WP_022648448.1;Name=WP_022648448.1;gbkey=CDS;gene=manY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=VMS06_RS08930;product=PTS mannose transporter subunit IIC;protein_id=WP_022648448.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 83637 84488 . + . ID=gene-VMS06_RS08935;Name=VMS06_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08935 NZ_JAVXZI010000006.1 Protein Homology CDS 83637 84488 . + 0 ID=cds-WP_006810994.1;Parent=gene-VMS06_RS08935;Dbxref=GenBank:WP_006810994.1;Name=WP_006810994.1;Ontology_term=GO:0009401,GO:0015761,GO:0022870,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-mannose phosphotransferase system transporter activity|0022870||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,mannose transmembrane transport|0015761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=VMS06_RS08935;product=PTS mannose transporter subunit IID;protein_id=WP_006810994.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 84543 85001 . + . ID=gene-VMS06_RS08940;Name=VMS06_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08940 NZ_JAVXZI010000006.1 Protein Homology CDS 84543 85001 . + 0 ID=cds-WP_063147819.1;Parent=gene-VMS06_RS08940;Dbxref=GenBank:WP_063147819.1;Name=WP_063147819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416334.1;locus_tag=VMS06_RS08940;product=DUF986 family protein;protein_id=WP_063147819.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 85402 85968 . + . ID=gene-VMS06_RS08945;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=VMS06_RS08945 NZ_JAVXZI010000006.1 Protein Homology CDS 85402 85968 . + 0 ID=cds-WP_032622454.1;Parent=gene-VMS06_RS08945;Dbxref=GenBank:WP_032622454.1;Name=WP_032622454.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416335.4;locus_tag=VMS06_RS08945;product=manganese efflux pump MntP;protein_id=WP_032622454.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 85965 86780 . - . ID=gene-VMS06_RS08950;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=VMS06_RS08950 NZ_JAVXZI010000006.1 Protein Homology CDS 85965 86780 . - 0 ID=cds-WP_023306472.1;Parent=gene-VMS06_RS08950;Dbxref=GenBank:WP_023306472.1;Name=WP_023306472.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170602.1;locus_tag=VMS06_RS08950;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_023306472.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 86820 88565 . - . ID=gene-VMS06_RS08955;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=VMS06_RS08955 NZ_JAVXZI010000006.1 Protein Homology CDS 86820 88565 . - 0 ID=cds-WP_023300357.1;Parent=gene-VMS06_RS08955;Dbxref=GenBank:WP_023300357.1;Name=WP_023300357.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859909.1;locus_tag=VMS06_RS08955;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_023300357.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 88782 88991 . - . ID=gene-VMS06_RS08960;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=VMS06_RS08960 NZ_JAVXZI010000006.1 Protein Homology CDS 88782 88991 . - 0 ID=cds-WP_001062678.1;Parent=gene-VMS06_RS08960;Dbxref=GenBank:WP_001062678.1;Name=WP_001062678.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=VMS06_RS08960;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq pseudogene 89004 89148 . - . ID=gene-VMS06_RS08965;Name=VMS06_RS08965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS08965;pseudo=true NZ_JAVXZI010000006.1 Protein Homology CDS 89004 89148 . - 0 ID=cds-VMS06_RS08965;Parent=gene-VMS06_RS08965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460794.1;locus_tag=VMS06_RS08965;product=DUF2627 domain-containing protein;pseudo=true;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 89818 90105 . - . ID=gene-VMS06_RS08970;Name=VMS06_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08970 NZ_JAVXZI010000006.1 Protein Homology CDS 89818 90105 . - 0 ID=cds-WP_023300358.1;Parent=gene-VMS06_RS08970;Dbxref=GenBank:WP_023300358.1;Name=WP_023300358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001667129.1;locus_tag=VMS06_RS08970;product=YebO family protein;protein_id=WP_023300358.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 90180 90323 . - . ID=gene-VMS06_RS08975;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=VMS06_RS08975 NZ_JAVXZI010000006.1 Protein Homology CDS 90180 90323 . - 0 ID=cds-WP_003859906.1;Parent=gene-VMS06_RS08975;Dbxref=GenBank:WP_003859906.1;Name=WP_003859906.1;Ontology_term=GO:0046677;gbkey=CDS;gene=mgrB;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884286.1;locus_tag=VMS06_RS08975;product=PhoP/PhoQ regulatory lipoprotein MgrB;protein_id=WP_003859906.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 90484 90723 . + . ID=gene-VMS06_RS08980;Name=VMS06_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08980 NZ_JAVXZI010000006.1 Protein Homology CDS 90484 90723 . + 0 ID=cds-WP_032624062.1;Parent=gene-VMS06_RS08980;Dbxref=GenBank:WP_032624062.1;Name=WP_032624062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016153403.1;locus_tag=VMS06_RS08980;product=YobH family protein;protein_id=WP_032624062.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 90787 91578 . - . ID=gene-VMS06_RS08985;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=VMS06_RS08985 NZ_JAVXZI010000006.1 Protein Homology CDS 90787 91578 . - 0 ID=cds-WP_022648455.1;Parent=gene-VMS06_RS08985;Dbxref=GenBank:WP_022648455.1;Name=WP_022648455.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227659.1;locus_tag=VMS06_RS08985;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_022648455.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 91757 93130 . + . ID=gene-VMS06_RS08990;Name=VMS06_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS08990 NZ_JAVXZI010000006.1 Protein Homology CDS 91757 93130 . + 0 ID=cds-WP_022648456.1;Parent=gene-VMS06_RS08990;Dbxref=GenBank:WP_022648456.1;Name=WP_022648456.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811003.1;locus_tag=VMS06_RS08990;product=MFS transporter;protein_id=WP_022648456.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 93181 94062 . - . ID=gene-VMS06_RS08995;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=VMS06_RS08995 NZ_JAVXZI010000006.1 Protein Homology CDS 93181 94062 . - 0 ID=cds-WP_003859899.1;Parent=gene-VMS06_RS08995;Dbxref=GenBank:WP_003859899.1;Name=WP_003859899.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=VMS06_RS08995;product=protease HtpX;protein_id=WP_003859899.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 94256 96304 . - . ID=gene-VMS06_RS09000;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=VMS06_RS09000 NZ_JAVXZI010000006.1 Protein Homology CDS 94256 96304 . - 0 ID=cds-WP_003859896.1;Parent=gene-VMS06_RS09000;Dbxref=GenBank:WP_003859896.1;Name=WP_003859896.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460801.1;locus_tag=VMS06_RS09000;product=carboxy terminal-processing peptidase;protein_id=WP_003859896.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 96324 97010 . - . ID=gene-VMS06_RS09005;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=VMS06_RS09005 NZ_JAVXZI010000006.1 Protein Homology CDS 96324 97010 . - 0 ID=cds-WP_063147818.1;Parent=gene-VMS06_RS09005;Dbxref=GenBank:WP_063147818.1;Name=WP_063147818.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460802.1;locus_tag=VMS06_RS09005;product=RNA chaperone ProQ;protein_id=WP_063147818.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 97107 97604 . - . ID=gene-VMS06_RS09010;Name=VMS06_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09010 NZ_JAVXZI010000006.1 Protein Homology CDS 97107 97604 . - 0 ID=cds-WP_023306473.1;Parent=gene-VMS06_RS09010;Dbxref=GenBank:WP_023306473.1;Name=WP_023306473.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707287.1;locus_tag=VMS06_RS09010;product=GAF domain-containing protein;protein_id=WP_023306473.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 97737 99020 . + . ID=gene-VMS06_RS09015;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=VMS06_RS09015 NZ_JAVXZI010000006.1 Protein Homology CDS 97737 99020 . + 0 ID=cds-WP_022648459.1;Parent=gene-VMS06_RS09015;Dbxref=GenBank:WP_022648459.1;Name=WP_022648459.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460804.1;locus_tag=VMS06_RS09015;product=membrane integrity lipid transport subunit YebS;protein_id=WP_022648459.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 98989 101622 . + . ID=gene-VMS06_RS09020;Name=VMS06_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09020 NZ_JAVXZI010000006.1 Protein Homology CDS 98989 101622 . + 0 ID=cds-WP_022648460.1;Parent=gene-VMS06_RS09020;Dbxref=GenBank:WP_022648460.1;Name=WP_022648460.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416348.2;locus_tag=VMS06_RS09020;product=PqiB family protein;protein_id=WP_022648460.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 101679 103142 . + . ID=gene-VMS06_RS09025;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=VMS06_RS09025 NZ_JAVXZI010000006.1 Protein Homology CDS 101679 103142 . + 0 ID=cds-WP_063147816.1;Parent=gene-VMS06_RS09025;Dbxref=GenBank:WP_063147816.1;Name=WP_063147816.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832382.1;locus_tag=VMS06_RS09025;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_063147816.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 103247 103486 . + . ID=gene-VMS06_RS09030;Name=VMS06_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09030 NZ_JAVXZI010000006.1 Protein Homology CDS 103247 103486 . + 0 ID=cds-WP_006811010.1;Parent=gene-VMS06_RS09030;Dbxref=GenBank:WP_006811010.1;Name=WP_006811010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705939.1;locus_tag=VMS06_RS09030;product=YebV family protein;protein_id=WP_006811010.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 103521 104165 . - . ID=gene-VMS06_RS09035;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=protein_coding;locus_tag=VMS06_RS09035 NZ_JAVXZI010000006.1 Protein Homology CDS 103521 104165 . - 0 ID=cds-WP_063147815.1;Parent=gene-VMS06_RS09035;Dbxref=GenBank:WP_063147815.1;Name=WP_063147815.1;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883411.1;locus_tag=VMS06_RS09035;product=protein-serine/threonine phosphatase;protein_id=WP_063147815.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 104333 105313 . + . ID=gene-VMS06_RS09040;Name=VMS06_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09040 NZ_JAVXZI010000006.1 Protein Homology CDS 104333 105313 . + 0 ID=cds-WP_063147814.1;Parent=gene-VMS06_RS09040;Dbxref=GenBank:WP_063147814.1;Name=WP_063147814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811012.1;locus_tag=VMS06_RS09040;product=VirK/YbjX family protein;protein_id=WP_063147814.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 105359 105556 . + . ID=gene-VMS06_RS09045;Name=VMS06_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09045 NZ_JAVXZI010000006.1 Protein Homology CDS 105359 105556 . + 0 ID=cds-WP_032609507.1;Parent=gene-VMS06_RS09045;Dbxref=GenBank:WP_032609507.1;Name=WP_032609507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000460990.1;locus_tag=VMS06_RS09045;product=hypothetical protein;protein_id=WP_032609507.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 105682 106020 . - . ID=gene-VMS06_RS09050;Name=VMS06_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09050 NZ_JAVXZI010000006.1 Protein Homology CDS 105682 106020 . - 0 ID=cds-WP_022648464.1;Parent=gene-VMS06_RS09050;Dbxref=GenBank:WP_022648464.1;Name=WP_022648464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500468.1;locus_tag=VMS06_RS09050;product=YebY family protein;protein_id=WP_022648464.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 106037 106906 . - . ID=gene-VMS06_RS09055;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=VMS06_RS09055 NZ_JAVXZI010000006.1 Protein Homology CDS 106037 106906 . - 0 ID=cds-WP_023300432.1;Parent=gene-VMS06_RS09055;Dbxref=GenBank:WP_023300432.1;Name=WP_023300432.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570291.1;locus_tag=VMS06_RS09055;product=copper homeostasis membrane protein CopD;protein_id=WP_023300432.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 106908 107279 . - . ID=gene-VMS06_RS09060;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=VMS06_RS09060 NZ_JAVXZI010000006.1 Protein Homology CDS 106908 107279 . - 0 ID=cds-WP_063147813.1;Parent=gene-VMS06_RS09060;Dbxref=GenBank:WP_063147813.1;Name=WP_063147813.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384342.1;locus_tag=VMS06_RS09060;product=CopC domain-containing protein YobA;protein_id=WP_063147813.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 107417 107647 . + . ID=gene-VMS06_RS09065;Name=VMS06_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09065 NZ_JAVXZI010000006.1 Protein Homology CDS 107417 107647 . + 0 ID=cds-WP_003859784.1;Parent=gene-VMS06_RS09065;Dbxref=GenBank:WP_003859784.1;Name=WP_003859784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120732.1;locus_tag=VMS06_RS09065;product=DNA polymerase III subunit theta;protein_id=WP_003859784.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 107759 108397 . + . ID=gene-VMS06_RS09070;Name=VMS06_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09070 NZ_JAVXZI010000006.1 Protein Homology CDS 107759 108397 . + 0 ID=cds-WP_045623249.1;Parent=gene-VMS06_RS09070;Dbxref=GenBank:WP_045623249.1;Name=WP_045623249.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859783.1;locus_tag=VMS06_RS09070;product=nitrilase-related carbon-nitrogen hydrolase;protein_id=WP_045623249.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 108422 109084 . + . ID=gene-VMS06_RS09075;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=VMS06_RS09075 NZ_JAVXZI010000006.1 Protein Homology CDS 108422 109084 . + 0 ID=cds-WP_022648468.1;Parent=gene-VMS06_RS09075;Dbxref=GenBank:WP_022648468.1;Name=WP_022648468.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170626.1;locus_tag=VMS06_RS09075;product=exodeoxyribonuclease X;protein_id=WP_022648468.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 109066 111141 . - . ID=gene-VMS06_RS09080;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=VMS06_RS09080 NZ_JAVXZI010000006.1 Protein Homology CDS 109066 111141 . - 0 ID=cds-WP_063147812.1;Parent=gene-VMS06_RS09080;Dbxref=GenBank:WP_063147812.1;Name=WP_063147812.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384343.1;locus_tag=VMS06_RS09080;product=oligopeptidase B;protein_id=WP_063147812.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 111217 111867 . - . ID=gene-VMS06_RS09085;Name=VMS06_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09085 NZ_JAVXZI010000006.1 Protein Homology CDS 111217 111867 . - 0 ID=cds-WP_022648470.1;Parent=gene-VMS06_RS09085;Dbxref=GenBank:WP_022648470.1;Name=WP_022648470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460837.1;locus_tag=VMS06_RS09085;product=tellurite resistance TerB family protein;protein_id=WP_022648470.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 112040 113218 . + . ID=gene-VMS06_RS09090;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=VMS06_RS09090 NZ_JAVXZI010000006.1 Protein Homology CDS 112040 113218 . + 0 ID=cds-WP_022648471.1;Parent=gene-VMS06_RS09090;Dbxref=GenBank:WP_022648471.1;Name=WP_022648471.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384345.1;locus_tag=VMS06_RS09090;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_022648471.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 113280 114674 . - . ID=gene-VMS06_RS09095;Name=VMS06_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09095 NZ_JAVXZI010000006.1 Protein Homology CDS 113280 114674 . - 0 ID=cds-WP_063147811.1;Parent=gene-VMS06_RS09095;Dbxref=GenBank:WP_063147811.1;Name=WP_063147811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811021.1;locus_tag=VMS06_RS09095;product=hypothetical protein;protein_id=WP_063147811.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 114674 114931 . - . ID=gene-VMS06_RS09100;Name=VMS06_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09100 NZ_JAVXZI010000006.1 Protein Homology CDS 114674 114931 . - 0 ID=cds-WP_063147810.1;Parent=gene-VMS06_RS09100;Dbxref=GenBank:WP_063147810.1;Name=WP_063147810.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155465.1;locus_tag=VMS06_RS09100;product=PAAR domain-containing protein;protein_id=WP_063147810.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 114944 115663 . - . ID=gene-VMS06_RS09105;Name=VMS06_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09105 NZ_JAVXZI010000006.1 Protein Homology CDS 114944 115663 . - 0 ID=cds-WP_063147809.1;Parent=gene-VMS06_RS09105;Dbxref=GenBank:WP_063147809.1;Name=WP_063147809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367257.1;locus_tag=VMS06_RS09105;product=T6SS immunity protein Tli3 family protein;protein_id=WP_063147809.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 115667 116374 . - . ID=gene-VMS06_RS09110;Name=VMS06_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09110 NZ_JAVXZI010000006.1 Protein Homology CDS 115667 116374 . - 0 ID=cds-WP_063147808.1;Parent=gene-VMS06_RS09110;Dbxref=GenBank:WP_063147808.1;Name=WP_063147808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367257.1;locus_tag=VMS06_RS09110;product=T6SS immunity protein Tli3 family protein;protein_id=WP_063147808.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 116384 118498 . - . ID=gene-VMS06_RS09115;Name=VMS06_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09115 NZ_JAVXZI010000006.1 Protein Homology CDS 116384 118498 . - 0 ID=cds-WP_063147807.1;Parent=gene-VMS06_RS09115;Dbxref=GenBank:WP_063147807.1;Name=WP_063147807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811023.1;locus_tag=VMS06_RS09115;product=T6SS effector phospholipase Tle3 domain-containing protein;protein_id=WP_063147807.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 118495 121008 . - . ID=gene-VMS06_RS09120;Name=VMS06_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09120 NZ_JAVXZI010000006.1 Protein Homology CDS 118495 121008 . - 0 ID=cds-WP_063147806.1;Parent=gene-VMS06_RS09120;Dbxref=GenBank:WP_063147806.1;Name=WP_063147806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811024.1;locus_tag=VMS06_RS09120;product=DUF2345 domain-containing protein;protein_id=WP_063147806.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 121347 121988 . - . ID=gene-VMS06_RS09125;Name=kdgA;gbkey=Gene;gene=kdgA;gene_biotype=protein_coding;gene_synonym=eda;locus_tag=VMS06_RS09125 NZ_JAVXZI010000006.1 Protein Homology CDS 121347 121988 . - 0 ID=cds-WP_023300441.1;Parent=gene-VMS06_RS09125;Dbxref=GenBank:WP_023300441.1;Name=WP_023300441.1;gbkey=CDS;gene=kdgA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=VMS06_RS09125;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_023300441.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 122028 123839 . - . ID=gene-VMS06_RS09130;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=VMS06_RS09130 NZ_JAVXZI010000006.1 Protein Homology CDS 122028 123839 . - 0 ID=cds-WP_063147805.1;Parent=gene-VMS06_RS09130;Dbxref=GenBank:WP_063147805.1;Name=WP_063147805.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460842.1;locus_tag=VMS06_RS09130;product=phosphogluconate dehydratase;protein_id=WP_063147805.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 124074 125549 . - . ID=gene-VMS06_RS09135;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=VMS06_RS09135 NZ_JAVXZI010000006.1 Protein Homology CDS 124074 125549 . - 0 ID=cds-WP_022648481.1;Parent=gene-VMS06_RS09135;Dbxref=GenBank:WP_022648481.1;Name=WP_022648481.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=VMS06_RS09135;product=glucose-6-phosphate dehydrogenase;protein_id=WP_022648481.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 125904 126773 . + . ID=gene-VMS06_RS09140;Name=VMS06_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09140 NZ_JAVXZI010000006.1 Protein Homology CDS 125904 126773 . + 0 ID=cds-WP_003859769.1;Parent=gene-VMS06_RS09140;Dbxref=GenBank:WP_003859769.1;Name=WP_003859769.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859769.1;locus_tag=VMS06_RS09140;product=MurR/RpiR family transcriptional regulator;protein_id=WP_003859769.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 126888 128330 . + . ID=gene-VMS06_RS09145;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=VMS06_RS09145 NZ_JAVXZI010000006.1 Protein Homology CDS 126888 128330 . + 0 ID=cds-WP_003859767.1;Parent=gene-VMS06_RS09145;Dbxref=GenBank:WP_003859767.1;Name=WP_003859767.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=VMS06_RS09145;product=pyruvate kinase;protein_id=WP_003859767.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 128374 129345 . - . ID=gene-VMS06_RS09150;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=VMS06_RS09150 NZ_JAVXZI010000006.1 Protein Homology CDS 128374 129345 . - 0 ID=cds-WP_022648482.1;Parent=gene-VMS06_RS09150;Dbxref=GenBank:WP_022648482.1;Name=WP_022648482.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460846.1;locus_tag=VMS06_RS09150;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_022648482.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 129465 130784 . - . ID=gene-VMS06_RS09155;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=VMS06_RS09155 NZ_JAVXZI010000006.1 Protein Homology CDS 129465 130784 . - 0 ID=cds-WP_022648483.1;Parent=gene-VMS06_RS09155;Dbxref=GenBank:WP_022648483.1;Name=WP_022648483.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460847.1;locus_tag=VMS06_RS09155;product=murein DD-endopeptidase MepM;protein_id=WP_022648483.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 130800 131744 . - . ID=gene-VMS06_RS09160;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=VMS06_RS09160 NZ_JAVXZI010000006.1 Protein Homology CDS 130800 131744 . - 0 ID=cds-WP_032622452.1;Parent=gene-VMS06_RS09160;Dbxref=GenBank:WP_032622452.1;Name=WP_032622452.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416371.4;locus_tag=VMS06_RS09160;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_032622452.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 131822 132577 . + . ID=gene-VMS06_RS09165;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=VMS06_RS09165 NZ_JAVXZI010000006.1 Protein Homology CDS 131822 132577 . + 0 ID=cds-WP_063147804.1;Parent=gene-VMS06_RS09165;Dbxref=GenBank:WP_063147804.1;Name=WP_063147804.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310595.1;locus_tag=VMS06_RS09165;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_063147804.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 132574 133359 . + . ID=gene-VMS06_RS09170;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=VMS06_RS09170 NZ_JAVXZI010000006.1 Protein Homology CDS 132574 133359 . + 0 ID=cds-WP_323630649.1;Parent=gene-VMS06_RS09170;Dbxref=GenBank:WP_323630649.1;Name=WP_323630649.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859755.1;locus_tag=VMS06_RS09170;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_323630649.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 133412 134422 . - . ID=gene-VMS06_RS09175;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=VMS06_RS09175 NZ_JAVXZI010000006.1 Protein Homology CDS 133412 134422 . - 0 ID=cds-WP_006811035.1;Parent=gene-VMS06_RS09175;Dbxref=GenBank:WP_006811035.1;Name=WP_006811035.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310597.1;locus_tag=VMS06_RS09175;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_006811035.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 134431 135045 . - . ID=gene-VMS06_RS09180;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=VMS06_RS09180 NZ_JAVXZI010000006.1 Protein Homology CDS 134431 135045 . - 0 ID=cds-WP_022648487.1;Parent=gene-VMS06_RS09180;Dbxref=GenBank:WP_022648487.1;Name=WP_022648487.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=VMS06_RS09180;product=Holliday junction branch migration protein RuvA;protein_id=WP_022648487.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 135126 135647 . - . ID=gene-VMS06_RS09185;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=VMS06_RS09185 NZ_JAVXZI010000006.1 Protein Homology CDS 135126 135647 . - 0 ID=cds-WP_014884319.1;Parent=gene-VMS06_RS09185;Dbxref=GenBank:WP_014884319.1;Name=WP_014884319.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=VMS06_RS09185;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_014884319.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 135682 136422 . - . ID=gene-VMS06_RS09190;Name=VMS06_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09190 NZ_JAVXZI010000006.1 Protein Homology CDS 135682 136422 . - 0 ID=cds-WP_003859747.1;Parent=gene-VMS06_RS09190;Dbxref=GenBank:WP_003859747.1;Name=WP_003859747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=VMS06_RS09190;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_003859747.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 136450 136893 . - . ID=gene-VMS06_RS09195;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=VMS06_RS09195 NZ_JAVXZI010000006.1 Protein Homology CDS 136450 136893 . - 0 ID=cds-WP_023300445.1;Parent=gene-VMS06_RS09195;Dbxref=GenBank:WP_023300445.1;Name=WP_023300445.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015741615.1;locus_tag=VMS06_RS09195;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_023300445.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 136895 138667 . - . ID=gene-VMS06_RS09200;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=VMS06_RS09200 NZ_JAVXZI010000006.1 Protein Homology CDS 136895 138667 . - 0 ID=cds-WP_023300446.1;Parent=gene-VMS06_RS09200;Dbxref=GenBank:WP_023300446.1;Name=WP_023300446.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120685.1;locus_tag=VMS06_RS09200;product=aspartate--tRNA ligase;protein_id=WP_023300446.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 138931 139497 . + . ID=gene-VMS06_RS09205;Name=VMS06_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09205 NZ_JAVXZI010000006.1 Protein Homology CDS 138931 139497 . + 0 ID=cds-WP_023300447.1;Parent=gene-VMS06_RS09205;Dbxref=GenBank:WP_023300447.1;Name=WP_023300447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227702.1;locus_tag=VMS06_RS09205;product=hydrolase;protein_id=WP_023300447.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 139494 140312 . + . ID=gene-VMS06_RS09210;Name=VMS06_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09210 NZ_JAVXZI010000006.1 Protein Homology CDS 139494 140312 . + 0 ID=cds-WP_063199258.1;Parent=gene-VMS06_RS09210;Dbxref=GenBank:WP_063199258.1;Name=WP_063199258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416382.1;locus_tag=VMS06_RS09210;product=DUF72 domain-containing protein;protein_id=WP_063199258.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 140364 140759 . + . ID=gene-VMS06_RS09215;Name=VMS06_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09215 NZ_JAVXZI010000006.1 Protein Homology CDS 140364 140759 . + 0 ID=cds-WP_003859737.1;Parent=gene-VMS06_RS09215;Dbxref=GenBank:WP_003859737.1;Name=WP_003859737.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460861.1;locus_tag=VMS06_RS09215;product=MAPEG family protein;protein_id=WP_003859737.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 140800 141543 . + . ID=gene-VMS06_RS09220;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=VMS06_RS09220 NZ_JAVXZI010000006.1 Protein Homology CDS 140800 141543 . + 0 ID=cds-WP_045345030.1;Parent=gene-VMS06_RS09220;Dbxref=GenBank:WP_045345030.1;Name=WP_045345030.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310607.1;locus_tag=VMS06_RS09220;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_045345030.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 141540 142511 . + . ID=gene-VMS06_RS09225;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=VMS06_RS09225 NZ_JAVXZI010000006.1 Protein Homology CDS 141540 142511 . + 0 ID=cds-WP_015570275.1;Parent=gene-VMS06_RS09225;Dbxref=GenBank:WP_015570275.1;Name=WP_015570275.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310608.1;locus_tag=VMS06_RS09225;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_015570275.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 142710 143453 . - . ID=gene-VMS06_RS09230;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=VMS06_RS09230 NZ_JAVXZI010000006.1 Protein Homology CDS 142710 143453 . - 0 ID=cds-WP_023300450.1;Parent=gene-VMS06_RS09230;Dbxref=GenBank:WP_023300450.1;Name=WP_023300450.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883388.1;locus_tag=VMS06_RS09230;product=copper homeostasis protein CutC;protein_id=WP_023300450.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 143532 144092 . - . ID=gene-VMS06_RS09235;Name=VMS06_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09235 NZ_JAVXZI010000006.1 Protein Homology CDS 143532 144092 . - 0 ID=cds-WP_015570274.1;Parent=gene-VMS06_RS09235;Dbxref=GenBank:WP_015570274.1;Name=WP_015570274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432549.1;locus_tag=VMS06_RS09235;product=VOC family protein;protein_id=WP_015570274.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 144331 146064 . + . ID=gene-VMS06_RS09240;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=VMS06_RS09240 NZ_JAVXZI010000006.1 Protein Homology CDS 144331 146064 . + 0 ID=cds-WP_048966691.1;Parent=gene-VMS06_RS09240;Dbxref=GenBank:WP_048966691.1;Name=WP_048966691.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=VMS06_RS09240;product=arginine--tRNA ligase;protein_id=WP_048966691.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 146110 146550 . - . ID=gene-VMS06_RS09245;Name=VMS06_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09245 NZ_JAVXZI010000006.1 Protein Homology CDS 146110 146550 . - 0 ID=cds-WP_063147777.1;Parent=gene-VMS06_RS09245;Dbxref=GenBank:WP_063147777.1;Name=WP_063147777.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023329.7;locus_tag=VMS06_RS09245;product=DUF3421 domain-containing protein;protein_id=WP_063147777.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 146596 146886 . - . ID=gene-VMS06_RS09250;Name=VMS06_RS09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09250 NZ_JAVXZI010000006.1 GeneMarkS-2+ CDS 146596 146886 . - 0 ID=cds-WP_022648496.1;Parent=gene-VMS06_RS09250;Dbxref=GenBank:WP_022648496.1;Name=WP_022648496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS09250;product=hypothetical protein;protein_id=WP_022648496.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 147131 148270 . - . ID=gene-VMS06_RS09255;Name=bglB;gbkey=Gene;gene=bglB;gene_biotype=protein_coding;locus_tag=VMS06_RS09255 NZ_JAVXZI010000006.1 Protein Homology CDS 147131 148270 . - 0 ID=cds-WP_063147840.1;Parent=gene-VMS06_RS09255;Dbxref=GenBank:WP_063147840.1;Name=WP_063147840.1;Ontology_term=GO:0009313,GO:0004556;gbkey=CDS;gene=bglB;go_function=alpha-amylase activity|0004556||IEA;go_process=oligosaccharide catabolic process|0009313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460868.1;locus_tag=VMS06_RS09255;product=beta-galactosidase BglB;protein_id=WP_063147840.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 148275 149858 . - . ID=gene-VMS06_RS09260;Name=VMS06_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09260 NZ_JAVXZI010000006.1 Protein Homology CDS 148275 149858 . - 0 ID=cds-WP_022648498.1;Parent=gene-VMS06_RS09260;Dbxref=GenBank:WP_022648498.1;Name=WP_022648498.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365975.1;locus_tag=VMS06_RS09260;product=MFS transporter;protein_id=WP_022648498.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 150120 150512 . - . ID=gene-VMS06_RS09265;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=VMS06_RS09265 NZ_JAVXZI010000006.1 Protein Homology CDS 150120 150512 . - 0 ID=cds-WP_063147776.1;Parent=gene-VMS06_RS09265;Dbxref=GenBank:WP_063147776.1;Name=WP_063147776.1;Ontology_term=GO:0044781;gbkey=CDS;gene=flhE;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416392.1;locus_tag=VMS06_RS09265;product=flagellar protein FlhE;protein_id=WP_063147776.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 150512 152590 . - . ID=gene-VMS06_RS09270;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=VMS06_RS09270 NZ_JAVXZI010000006.1 Protein Homology CDS 150512 152590 . - 0 ID=cds-WP_003859723.1;Parent=gene-VMS06_RS09270;Dbxref=GenBank:WP_003859723.1;Name=WP_003859723.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460870.1;locus_tag=VMS06_RS09270;product=flagellar biosynthesis protein FlhA;protein_id=WP_003859723.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 152583 153731 . - . ID=gene-VMS06_RS09275;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=VMS06_RS09275 NZ_JAVXZI010000006.1 Protein Homology CDS 152583 153731 . - 0 ID=cds-WP_022648500.1;Parent=gene-VMS06_RS09275;Dbxref=GenBank:WP_022648500.1;Name=WP_022648500.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460871.1;locus_tag=VMS06_RS09275;product=flagellar biosynthesis protein FlhB;protein_id=WP_022648500.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 153881 154525 . - . ID=gene-VMS06_RS09280;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=VMS06_RS09280 NZ_JAVXZI010000006.1 Protein Homology CDS 153881 154525 . - 0 ID=cds-WP_022648501.1;Parent=gene-VMS06_RS09280;Dbxref=GenBank:WP_022648501.1;Name=WP_022648501.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460872.1;locus_tag=VMS06_RS09280;product=protein phosphatase CheZ;protein_id=WP_022648501.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 154536 154925 . - . ID=gene-VMS06_RS09285;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=VMS06_RS09285 NZ_JAVXZI010000006.1 Protein Homology CDS 154536 154925 . - 0 ID=cds-WP_000763862.1;Parent=gene-VMS06_RS09285;Dbxref=GenBank:WP_000763862.1;Name=WP_000763862.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=VMS06_RS09285;product=chemotaxis response regulator CheY;protein_id=WP_000763862.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 154943 155992 . - . ID=gene-VMS06_RS09290;Name=VMS06_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09290 NZ_JAVXZI010000006.1 Protein Homology CDS 154943 155992 . - 0 ID=cds-WP_014884341.1;Parent=gene-VMS06_RS09290;Dbxref=GenBank:WP_014884341.1;Name=WP_014884341.1;Ontology_term=GO:0006482,GO:0006935,GO:0018277,GO:0000156,GO:0008984,GO:0050568,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,protein-glutamate methylesterase activity|0008984||IEA,protein-glutamine glutaminase activity|0050568||IEA;go_process=protein demethylation|0006482||IEA,chemotaxis|0006935||IEA,protein deamination|0018277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000036372.1;locus_tag=VMS06_RS09290;product=protein-glutamate methylesterase/protein-glutamine glutaminase;protein_id=WP_014884341.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 155989 156855 . - . ID=gene-VMS06_RS09295;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=VMS06_RS09295 NZ_JAVXZI010000006.1 Protein Homology CDS 155989 156855 . - 0 ID=cds-WP_017384409.1;Parent=gene-VMS06_RS09295;Dbxref=GenBank:WP_017384409.1;Name=WP_017384409.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460875.1;locus_tag=VMS06_RS09295;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_017384409.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 156875 158476 . - . ID=gene-VMS06_RS09300;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=VMS06_RS09300 NZ_JAVXZI010000006.1 Protein Homology CDS 156875 158476 . - 0 ID=cds-WP_063147775.1;Parent=gene-VMS06_RS09300;Dbxref=GenBank:WP_063147775.1;Name=WP_063147775.1;gbkey=CDS;gene=tap;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500428.1;locus_tag=VMS06_RS09300;product=methyl-accepting chemotaxis protein IV;protein_id=WP_063147775.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 158521 160188 . - . ID=gene-VMS06_RS09305;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;locus_tag=VMS06_RS09305 NZ_JAVXZI010000006.1 Protein Homology CDS 158521 160188 . - 0 ID=cds-WP_063147774.1;Parent=gene-VMS06_RS09305;Dbxref=GenBank:WP_063147774.1;Name=WP_063147774.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;gene=tar;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859710.1;locus_tag=VMS06_RS09305;product=methyl-accepting chemotaxis protein II;protein_id=WP_063147774.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 160275 161237 . - . ID=gene-VMS06_RS09310;Name=VMS06_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09310 NZ_JAVXZI010000006.1 Protein Homology CDS 160275 161237 . - 0 ID=cds-WP_063147773.1;Parent=gene-VMS06_RS09310;Dbxref=GenBank:WP_063147773.1;Name=WP_063147773.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859708.1;locus_tag=VMS06_RS09310;product=Csu type fimbrial protein;protein_id=WP_063147773.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 161234 163585 . - . ID=gene-VMS06_RS09315;Name=VMS06_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09315 NZ_JAVXZI010000006.1 Protein Homology CDS 161234 163585 . - 0 ID=cds-WP_063843761.1;Parent=gene-VMS06_RS09315;Dbxref=GenBank:WP_063843761.1;Name=WP_063843761.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570267.1;locus_tag=VMS06_RS09315;product=fimbria/pilus outer membrane usher protein;protein_id=WP_063843761.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 163545 164306 . - . ID=gene-VMS06_RS09320;Name=VMS06_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09320 NZ_JAVXZI010000006.1 Protein Homology CDS 163545 164306 . - 0 ID=cds-WP_023300459.1;Parent=gene-VMS06_RS09320;Dbxref=GenBank:WP_023300459.1;Name=WP_023300459.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570266.1;locus_tag=VMS06_RS09320;product=fimbrial biogenesis chaperone;protein_id=WP_023300459.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 164323 164892 . - . ID=gene-VMS06_RS09325;Name=VMS06_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09325 NZ_JAVXZI010000006.1 Protein Homology CDS 164323 164892 . - 0 ID=cds-WP_063843760.1;Parent=gene-VMS06_RS09325;Dbxref=GenBank:WP_063843760.1;Name=WP_063843760.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570265.1;locus_tag=VMS06_RS09325;product=Csu type fimbrial protein;protein_id=WP_063843760.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 164900 165472 . - . ID=gene-VMS06_RS09330;Name=VMS06_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09330 NZ_JAVXZI010000006.1 Protein Homology CDS 164900 165472 . - 0 ID=cds-WP_022648508.1;Parent=gene-VMS06_RS09330;Dbxref=GenBank:WP_022648508.1;Name=WP_022648508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693232.1;locus_tag=VMS06_RS09330;product=spore coat protein U domain-containing protein;protein_id=WP_022648508.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 165900 167159 . + . ID=gene-VMS06_RS09335;Name=VMS06_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09335 NZ_JAVXZI010000006.1 Protein Homology CDS 165900 167159 . + 0 ID=cds-WP_023300461.1;Parent=gene-VMS06_RS09335;Dbxref=GenBank:WP_023300461.1;Name=WP_023300461.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156812.1;locus_tag=VMS06_RS09335;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_023300461.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 167256 167759 . - . ID=gene-VMS06_RS09340;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=VMS06_RS09340 NZ_JAVXZI010000006.1 Protein Homology CDS 167256 167759 . - 0 ID=cds-WP_003859699.1;Parent=gene-VMS06_RS09340;Dbxref=GenBank:WP_003859699.1;Name=WP_003859699.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460877.1;locus_tag=VMS06_RS09340;product=chemotaxis protein CheW;protein_id=WP_003859699.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 167779 169788 . - . ID=gene-VMS06_RS09345;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=VMS06_RS09345 NZ_JAVXZI010000006.1 Protein Homology CDS 167779 169788 . - 0 ID=cds-WP_063147770.1;Parent=gene-VMS06_RS09345;Dbxref=GenBank:WP_063147770.1;Name=WP_063147770.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859698.1;locus_tag=VMS06_RS09345;product=chemotaxis protein CheA;protein_id=WP_063147770.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 169793 170722 . - . ID=gene-VMS06_RS09350;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=VMS06_RS09350 NZ_JAVXZI010000006.1 Protein Homology CDS 169793 170722 . - 0 ID=cds-WP_022648511.1;Parent=gene-VMS06_RS09350;Dbxref=GenBank:WP_022648511.1;Name=WP_022648511.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460879.1;locus_tag=VMS06_RS09350;product=flagellar motor protein MotB;protein_id=WP_022648511.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 170719 171606 . - . ID=gene-VMS06_RS09355;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=VMS06_RS09355 NZ_JAVXZI010000006.1 Protein Homology CDS 170719 171606 . - 0 ID=cds-WP_003859696.1;Parent=gene-VMS06_RS09355;Dbxref=GenBank:WP_003859696.1;Name=WP_003859696.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460880.1;locus_tag=VMS06_RS09355;product=flagellar motor stator protein MotA;protein_id=WP_003859696.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 171730 172308 . - . ID=gene-VMS06_RS09360;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=VMS06_RS09360 NZ_JAVXZI010000006.1 Protein Homology CDS 171730 172308 . - 0 ID=cds-WP_022648512.1;Parent=gene-VMS06_RS09360;Dbxref=GenBank:WP_022648512.1;Name=WP_022648512.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127694.1;locus_tag=VMS06_RS09360;product=flagellar transcriptional regulator FlhC;protein_id=WP_022648512.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 172311 172661 . - . ID=gene-VMS06_RS09365;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=VMS06_RS09365 NZ_JAVXZI010000006.1 Protein Homology CDS 172311 172661 . - 0 ID=cds-WP_074136341.1;Parent=gene-VMS06_RS09365;Dbxref=GenBank:WP_074136341.1;Name=WP_074136341.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310629.2;locus_tag=VMS06_RS09365;product=flagellar transcriptional regulator FlhD;protein_id=WP_074136341.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 173458 173886 . + . ID=gene-VMS06_RS09370;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=VMS06_RS09370 NZ_JAVXZI010000006.1 Protein Homology CDS 173458 173886 . + 0 ID=cds-WP_022648513.1;Parent=gene-VMS06_RS09370;Dbxref=GenBank:WP_022648513.1;Name=WP_022648513.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000122606.1;locus_tag=VMS06_RS09370;product=universal stress protein UspC;protein_id=WP_022648513.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 173902 175326 . - . ID=gene-VMS06_RS09375;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=VMS06_RS09375 NZ_JAVXZI010000006.1 Protein Homology CDS 173902 175326 . - 0 ID=cds-WP_022648514.1;Parent=gene-VMS06_RS09375;Dbxref=GenBank:WP_022648514.1;Name=WP_022648514.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460885.1;locus_tag=VMS06_RS09375;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_022648514.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 175301 176104 . - . ID=gene-VMS06_RS09380;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=VMS06_RS09380 NZ_JAVXZI010000006.1 Protein Homology CDS 175301 176104 . - 0 ID=cds-WP_022648515.1;Parent=gene-VMS06_RS09380;Dbxref=GenBank:WP_022648515.1;Name=WP_022648515.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884357.1;locus_tag=VMS06_RS09380;product=trehalose-phosphatase;protein_id=WP_022648515.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 176258 177238 . - . ID=gene-VMS06_RS09385;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=VMS06_RS09385 NZ_JAVXZI010000006.1 Protein Homology CDS 176258 177238 . - 0 ID=cds-WP_022648516.1;Parent=gene-VMS06_RS09385;Dbxref=GenBank:WP_022648516.1;Name=WP_022648516.1;gbkey=CDS;gene=araH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026162.2;locus_tag=VMS06_RS09385;product=arabinose ABC transporter permease AraH;protein_id=WP_022648516.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 177253 178767 . - . ID=gene-VMS06_RS09390;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=VMS06_RS09390 NZ_JAVXZI010000006.1 Protein Homology CDS 177253 178767 . - 0 ID=cds-WP_023300465.1;Parent=gene-VMS06_RS09390;Dbxref=GenBank:WP_023300465.1;Name=WP_023300465.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127704.1;locus_tag=VMS06_RS09390;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_023300465.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 178839 179828 . - . ID=gene-VMS06_RS09395;Name=araF;gbkey=Gene;gene=araF;gene_biotype=protein_coding;locus_tag=VMS06_RS09395 NZ_JAVXZI010000006.1 Protein Homology CDS 178839 179828 . - 0 ID=cds-WP_023300466.1;Parent=gene-VMS06_RS09395;Dbxref=GenBank:WP_023300466.1;Name=WP_023300466.1;gbkey=CDS;gene=araF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416414.1;locus_tag=VMS06_RS09395;product=arabinose ABC transporter substrate-binding protein AraF;protein_id=WP_023300466.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 180144 180701 . - . ID=gene-VMS06_RS09400;Name=VMS06_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09400 NZ_JAVXZI010000006.1 Protein Homology CDS 180144 180701 . - 0 ID=cds-WP_045308667.1;Parent=gene-VMS06_RS09400;Dbxref=GenBank:WP_045308667.1;Name=WP_045308667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460887.1;locus_tag=VMS06_RS09400;product=DJ-1/PfpI family protein;protein_id=WP_045308667.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 181206 181709 . + . ID=gene-VMS06_RS09405;Name=VMS06_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09405 NZ_JAVXZI010000006.1 Protein Homology CDS 181206 181709 . + 0 ID=cds-WP_022648520.1;Parent=gene-VMS06_RS09405;Dbxref=GenBank:WP_022648520.1;Name=WP_022648520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384424.1;locus_tag=VMS06_RS09405;product=non-heme ferritin-like protein;protein_id=WP_022648520.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 182287 183630 . + . ID=gene-VMS06_RS09410;Name=VMS06_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09410 NZ_JAVXZI010000006.1 Protein Homology CDS 182287 183630 . + 0 ID=cds-WP_063147768.1;Parent=gene-VMS06_RS09410;Dbxref=GenBank:WP_063147768.1;Name=WP_063147768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884362.1;locus_tag=VMS06_RS09410;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_063147768.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 183711 183962 . - . ID=gene-VMS06_RS09415;Name=VMS06_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09415 NZ_JAVXZI010000006.1 Protein Homology CDS 183711 183962 . - 0 ID=cds-WP_003859683.1;Parent=gene-VMS06_RS09415;Dbxref=GenBank:WP_003859683.1;Name=WP_003859683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416416.2;locus_tag=VMS06_RS09415;product=DUF2766 family protein;protein_id=WP_003859683.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 184069 184152 . - . ID=gene-VMS06_RS09420;Name=azuC;gbkey=Gene;gene=azuC;gene_biotype=protein_coding;locus_tag=VMS06_RS09420 NZ_JAVXZI010000006.1 Protein Homology CDS 184069 184152 . - 0 ID=cds-WP_003859682.1;Parent=gene-VMS06_RS09420;Dbxref=GenBank:WP_003859682.1;Name=WP_003859682.1;gbkey=CDS;gene=azuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791245.1;locus_tag=VMS06_RS09420;product=stress response protein AzuC;protein_id=WP_003859682.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 184367 185785 . + . ID=gene-VMS06_RS09425;Name=VMS06_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09425 NZ_JAVXZI010000006.1 Protein Homology CDS 184367 185785 . + 0 ID=cds-WP_046619382.1;Parent=gene-VMS06_RS09425;Dbxref=GenBank:WP_046619382.1;Name=WP_046619382.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384426.1;locus_tag=VMS06_RS09425;product=MFS transporter;protein_id=WP_046619382.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 185827 186465 . - . ID=gene-VMS06_RS09430;Name=VMS06_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09430 NZ_JAVXZI010000006.1 Protein Homology CDS 185827 186465 . - 0 ID=cds-WP_003859680.1;Parent=gene-VMS06_RS09430;Dbxref=GenBank:WP_003859680.1;Name=WP_003859680.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804227.1;locus_tag=VMS06_RS09430;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_003859680.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 186711 187049 . + . ID=gene-VMS06_RS09435;Name=yecR;gbkey=Gene;gene=yecR;gene_biotype=protein_coding;locus_tag=VMS06_RS09435 NZ_JAVXZI010000006.1 Protein Homology CDS 186711 187049 . + 0 ID=cds-WP_323630653.1;Parent=gene-VMS06_RS09435;Dbxref=GenBank:WP_323630653.1;Name=WP_323630653.1;gbkey=CDS;gene=yecR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832439.1;locus_tag=VMS06_RS09435;product=YecR family lipoprotein;protein_id=WP_323630653.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 187250 187747 . + . ID=gene-VMS06_RS09440;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=VMS06_RS09440 NZ_JAVXZI010000006.1 Protein Homology CDS 187250 187747 . + 0 ID=cds-WP_022648525.1;Parent=gene-VMS06_RS09440;Dbxref=GenBank:WP_022648525.1;Name=WP_022648525.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920608.1;locus_tag=VMS06_RS09440;product=non-heme ferritin;protein_id=WP_022648525.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 187784 188023 . - . ID=gene-VMS06_RS09445;Name=VMS06_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09445 NZ_JAVXZI010000006.1 Protein Homology CDS 187784 188023 . - 0 ID=cds-WP_032622412.1;Parent=gene-VMS06_RS09445;Dbxref=GenBank:WP_032622412.1;Name=WP_032622412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460892.1;locus_tag=VMS06_RS09445;product=YecH family metal-binding protein;protein_id=WP_032622412.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 188212 189423 . + . ID=gene-VMS06_RS09450;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=VMS06_RS09450 NZ_JAVXZI010000006.1 Protein Homology CDS 188212 189423 . + 0 ID=cds-WP_063147839.1;Parent=gene-VMS06_RS09450;Dbxref=GenBank:WP_063147839.1;Name=WP_063147839.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416420.1;locus_tag=VMS06_RS09450;product=tyrosine transporter TyrP;protein_id=WP_063147839.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 189452 190120 . - . ID=gene-VMS06_RS09455;Name=VMS06_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09455 NZ_JAVXZI010000006.1 Protein Homology CDS 189452 190120 . - 0 ID=cds-WP_063147766.1;Parent=gene-VMS06_RS09455;Dbxref=GenBank:WP_063147766.1;Name=WP_063147766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500399.1;locus_tag=VMS06_RS09455;product=YecA/YgfB family protein;protein_id=WP_063147766.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq pseudogene 190532 191653 . + . ID=gene-VMS06_RS09460;Name=VMS06_RS09460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS09460;pseudo=true NZ_JAVXZI010000006.1 Protein Homology CDS 190532 191653 . + 0 ID=cds-VMS06_RS09460;Parent=gene-VMS06_RS09460;Note=internal stop;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096034.1;locus_tag=VMS06_RS09460;product=branched-chain amino acid ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 191722 192636 . + . ID=gene-VMS06_RS09465;Name=VMS06_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09465 NZ_JAVXZI010000006.1 Protein Homology CDS 191722 192636 . + 0 ID=cds-WP_003859667.1;Parent=gene-VMS06_RS09465;Dbxref=GenBank:WP_003859667.1;Name=WP_003859667.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859667.1;locus_tag=VMS06_RS09465;product=ABC transporter permease subunit;protein_id=WP_003859667.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 192648 193922 . + . ID=gene-VMS06_RS09470;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=VMS06_RS09470 NZ_JAVXZI010000006.1 Protein Homology CDS 192648 193922 . + 0 ID=cds-WP_323630654.1;Parent=gene-VMS06_RS09470;Dbxref=GenBank:WP_323630654.1;Name=WP_323630654.1;Ontology_term=GO:0055085,GO:0015658,GO:0016020;gbkey=CDS;gene=livM;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883360.1;locus_tag=VMS06_RS09470;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_323630654.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 193919 194794 . + . ID=gene-VMS06_RS09475;Name=VMS06_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09475 NZ_JAVXZI010000006.1 Protein Homology CDS 193919 194794 . + 0 ID=cds-WP_023306508.1;Parent=gene-VMS06_RS09475;Dbxref=GenBank:WP_023306508.1;Name=WP_023306508.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384430.1;locus_tag=VMS06_RS09475;product=ATP-binding cassette domain-containing protein;protein_id=WP_023306508.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 194791 195507 . + . ID=gene-VMS06_RS09480;Name=VMS06_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09480 NZ_JAVXZI010000006.1 Protein Homology CDS 194791 195507 . + 0 ID=cds-WP_032622411.1;Parent=gene-VMS06_RS09480;Dbxref=GenBank:WP_032622411.1;Name=WP_032622411.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500393.1;locus_tag=VMS06_RS09480;product=ABC transporter ATP-binding protein;protein_id=WP_032622411.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 195671 196141 . + . ID=gene-VMS06_RS09485;Name=VMS06_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09485 NZ_JAVXZI010000006.1 Protein Homology CDS 195671 196141 . + 0 ID=cds-WP_023306510.1;Parent=gene-VMS06_RS09485;Dbxref=GenBank:WP_023306510.1;Name=WP_023306510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384432.1;locus_tag=VMS06_RS09485;product=hypothetical protein;protein_id=WP_023306510.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 196147 197073 . - . ID=gene-VMS06_RS09490;Name=VMS06_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09490 NZ_JAVXZI010000006.1 Protein Homology CDS 196147 197073 . - 0 ID=cds-WP_032624025.1;Parent=gene-VMS06_RS09490;Dbxref=GenBank:WP_032624025.1;Name=WP_032624025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384433.1;locus_tag=VMS06_RS09490;product=LysR substrate-binding domain-containing protein;protein_id=WP_032624025.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 197103 197426 . - . ID=gene-VMS06_RS09495;Name=VMS06_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09495 NZ_JAVXZI010000006.1 Protein Homology CDS 197103 197426 . - 0 ID=cds-WP_023306512.1;Parent=gene-VMS06_RS09495;Dbxref=GenBank:WP_023306512.1;Name=WP_023306512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859653.1;locus_tag=VMS06_RS09495;product=hypothetical protein;protein_id=WP_023306512.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 197429 197731 . - . ID=gene-VMS06_RS09500;Name=VMS06_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09500 NZ_JAVXZI010000006.1 Protein Homology CDS 197429 197731 . - 0 ID=cds-WP_223861941.1;Parent=gene-VMS06_RS09500;Dbxref=GenBank:WP_223861941.1;Name=WP_223861941.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025354.7;locus_tag=VMS06_RS09500;product=DUF4225 domain-containing protein;protein_id=WP_223861941.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq pseudogene 197669 197800 . + . ID=gene-VMS06_RS09505;Name=VMS06_RS09505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS09505;partial=true;pseudo=true;start_range=.,197669 NZ_JAVXZI010000006.1 Protein Homology CDS 197669 197800 . + 0 ID=cds-VMS06_RS09505;Parent=gene-VMS06_RS09505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082966.1;locus_tag=VMS06_RS09505;partial=true;product=integrase;pseudo=true;start_range=.,197669;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 197927 198013 . - . ID=gene-VMS06_RS09510;Name=VMS06_RS09510;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS09510 NZ_JAVXZI010000006.1 tRNAscan-SE tRNA 197927 198013 . - . ID=rna-VMS06_RS09510;Parent=gene-VMS06_RS09510;anticodon=(pos:complement(197977..197979));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS09510;product=tRNA-Leu NZ_JAVXZI010000006.1 tRNAscan-SE exon 197927 198013 . - . ID=exon-VMS06_RS09510-1;Parent=rna-VMS06_RS09510;anticodon=(pos:complement(197977..197979));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS09510;product=tRNA-Leu NZ_JAVXZI010000006.1 RefSeq gene 198025 198098 . - . ID=gene-VMS06_RS09515;Name=VMS06_RS09515;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS09515 NZ_JAVXZI010000006.1 tRNAscan-SE tRNA 198025 198098 . - . ID=rna-VMS06_RS09515;Parent=gene-VMS06_RS09515;anticodon=(pos:complement(198064..198066));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS09515;product=tRNA-Cys NZ_JAVXZI010000006.1 tRNAscan-SE exon 198025 198098 . - . ID=exon-VMS06_RS09515-1;Parent=rna-VMS06_RS09515;anticodon=(pos:complement(198064..198066));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS09515;product=tRNA-Cys NZ_JAVXZI010000006.1 RefSeq gene 198150 198225 . - . ID=gene-VMS06_RS09520;Name=VMS06_RS09520;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS09520 NZ_JAVXZI010000006.1 tRNAscan-SE tRNA 198150 198225 . - . ID=rna-VMS06_RS09520;Parent=gene-VMS06_RS09520;anticodon=(pos:complement(198190..198192));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS09520;product=tRNA-Gly NZ_JAVXZI010000006.1 tRNAscan-SE exon 198150 198225 . - . ID=exon-VMS06_RS09520-1;Parent=rna-VMS06_RS09520;anticodon=(pos:complement(198190..198192));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS09520;product=tRNA-Gly NZ_JAVXZI010000006.1 RefSeq gene 198389 198937 . - . ID=gene-VMS06_RS09525;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=VMS06_RS09525 NZ_JAVXZI010000006.1 Protein Homology CDS 198389 198937 . - 0 ID=cds-WP_003859652.1;Parent=gene-VMS06_RS09525;Dbxref=GenBank:WP_003859652.1;Name=WP_003859652.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=VMS06_RS09525;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_003859652.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 198994 200826 . - . ID=gene-VMS06_RS09530;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=VMS06_RS09530 NZ_JAVXZI010000006.1 Protein Homology CDS 198994 200826 . - 0 ID=cds-WP_023300478.1;Parent=gene-VMS06_RS09530;Dbxref=GenBank:WP_023300478.1;Name=WP_023300478.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=VMS06_RS09530;product=excinuclease ABC subunit UvrC;protein_id=WP_023300478.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 200823 201479 . - . ID=gene-VMS06_RS09535;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=VMS06_RS09535 NZ_JAVXZI010000006.1 Protein Homology CDS 200823 201479 . - 0 ID=cds-WP_017384478.1;Parent=gene-VMS06_RS09535;Dbxref=GenBank:WP_017384478.1;Name=WP_017384478.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310679.1;locus_tag=VMS06_RS09535;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_017384478.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 201878 201958 . + . ID=gene-VMS06_RS09540;Name=VMS06_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09540 NZ_JAVXZI010000006.1 Protein Homology CDS 201878 201958 . + 0 ID=cds-WP_418235935.1;Parent=gene-VMS06_RS09540;Dbxref=GenBank:WP_418235935.1;Name=WP_418235935.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049070.2;locus_tag=VMS06_RS09540;product=hypothetical protein;protein_id=WP_418235935.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 201945 202169 . + . ID=gene-VMS06_RS09545;Name=VMS06_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09545 NZ_JAVXZI010000006.1 Protein Homology CDS 201945 202169 . + 0 ID=cds-WP_003859644.1;Parent=gene-VMS06_RS09545;Dbxref=GenBank:WP_003859644.1;Name=WP_003859644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460902.1;locus_tag=VMS06_RS09545;product=DUF2594 family protein;protein_id=WP_003859644.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 202234 202956 . - . ID=gene-VMS06_RS09550;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=VMS06_RS09550 NZ_JAVXZI010000006.1 Protein Homology CDS 202234 202956 . - 0 ID=cds-WP_032622448.1;Parent=gene-VMS06_RS09550;Dbxref=GenBank:WP_032622448.1;Name=WP_032622448.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203458.1;locus_tag=VMS06_RS09550;product=quorum-sensing transcriptional regulator SdiA;protein_id=WP_032622448.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 203180 203932 . - . ID=gene-VMS06_RS09555;Name=tcyN;gbkey=Gene;gene=tcyN;gene_biotype=protein_coding;locus_tag=VMS06_RS09555 NZ_JAVXZI010000006.1 Protein Homology CDS 203180 203932 . - 0 ID=cds-WP_023306513.1;Parent=gene-VMS06_RS09555;Dbxref=GenBank:WP_023306513.1;Name=WP_023306513.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=tcyN;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=VMS06_RS09555;product=L-cystine ABC transporter ATP-binding protein TcyN;protein_id=WP_023306513.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 203929 204597 . - . ID=gene-VMS06_RS09560;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=VMS06_RS09560 NZ_JAVXZI010000006.1 Protein Homology CDS 203929 204597 . - 0 ID=cds-WP_022648540.1;Parent=gene-VMS06_RS09560;Dbxref=GenBank:WP_022648540.1;Name=WP_022648540.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460905.1;locus_tag=VMS06_RS09560;product=cystine ABC transporter permease;protein_id=WP_022648540.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 204619 205605 . - . ID=gene-VMS06_RS09565;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=VMS06_RS09565 NZ_JAVXZI010000006.1 Protein Homology CDS 204619 205605 . - 0 ID=cds-WP_063843759.1;Parent=gene-VMS06_RS09565;Dbxref=GenBank:WP_063843759.1;Name=WP_063843759.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416429.4;locus_tag=VMS06_RS09565;product=D-cysteine desulfhydrase;protein_id=WP_063843759.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 205709 206509 . - . ID=gene-VMS06_RS09570;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=VMS06_RS09570 NZ_JAVXZI010000006.1 Protein Homology CDS 205709 206509 . - 0 ID=cds-WP_023300481.1;Parent=gene-VMS06_RS09570;Dbxref=GenBank:WP_023300481.1;Name=WP_023300481.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated monoatomic ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416430.1;locus_tag=VMS06_RS09570;product=cystine ABC transporter substrate-binding protein;protein_id=WP_023300481.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 206596 207147 . - . ID=gene-VMS06_RS09575;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=VMS06_RS09575 NZ_JAVXZI010000006.1 Protein Homology CDS 206596 207147 . - 0 ID=cds-WP_022648543.1;Parent=gene-VMS06_RS09575;Dbxref=GenBank:WP_022648543.1;Name=WP_022648543.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460908.1;locus_tag=VMS06_RS09575;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_022648543.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 207202 207921 . - . ID=gene-VMS06_RS09580;Name=VMS06_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09580 NZ_JAVXZI010000006.1 Protein Homology CDS 207202 207921 . - 0 ID=cds-WP_003859623.1;Parent=gene-VMS06_RS09580;Dbxref=GenBank:WP_003859623.1;Name=WP_003859623.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460909.1;locus_tag=VMS06_RS09580;product=RNA polymerase sigma factor FliA;protein_id=WP_003859623.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 208085 209410 . - . ID=gene-VMS06_RS09585;Name=VMS06_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09585 NZ_JAVXZI010000006.1 Protein Homology CDS 208085 209410 . - 0 ID=cds-WP_023300483.1;Parent=gene-VMS06_RS09585;Dbxref=GenBank:WP_023300483.1;Name=WP_023300483.1;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884384.1;locus_tag=VMS06_RS09585;product=FliC/FljB family flagellin;protein_id=WP_023300483.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 209680 211092 . + . ID=gene-VMS06_RS09590;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=VMS06_RS09590 NZ_JAVXZI010000006.1 Protein Homology CDS 209680 211092 . + 0 ID=cds-WP_023300484.1;Parent=gene-VMS06_RS09590;Dbxref=GenBank:WP_023300484.1;Name=WP_023300484.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416434.1;locus_tag=VMS06_RS09590;product=flagellar filament capping protein FliD;protein_id=WP_023300484.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 211123 211533 . + . ID=gene-VMS06_RS09595;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=VMS06_RS09595 NZ_JAVXZI010000006.1 Protein Homology CDS 211123 211533 . + 0 ID=cds-WP_003859616.1;Parent=gene-VMS06_RS09595;Dbxref=GenBank:WP_003859616.1;Name=WP_003859616.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000270666.1;locus_tag=VMS06_RS09595;product=flagellar export chaperone FliS;protein_id=WP_003859616.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 211533 211904 . + . ID=gene-VMS06_RS09600;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=VMS06_RS09600 NZ_JAVXZI010000006.1 Protein Homology CDS 211533 211904 . + 0 ID=cds-WP_006811148.1;Parent=gene-VMS06_RS09600;Dbxref=GenBank:WP_006811148.1;Name=WP_006811148.1;Ontology_term=GO:0006605,GO:0044780,GO:1902209;gbkey=CDS;gene=fliT;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA,negative regulation of bacterial-type flagellum assembly|1902209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811148.1;locus_tag=VMS06_RS09600;product=flagella biosynthesis regulatory protein FliT;protein_id=WP_006811148.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 212003 213490 . + . ID=gene-VMS06_RS09605;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=VMS06_RS09605 NZ_JAVXZI010000006.1 Protein Homology CDS 212003 213490 . + 0 ID=cds-WP_063843758.1;Parent=gene-VMS06_RS09605;Dbxref=GenBank:WP_063843758.1;Name=WP_063843758.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310693.1;locus_tag=VMS06_RS09605;product=alpha-amylase;protein_id=WP_063843758.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 213998 214411 . - . ID=gene-VMS06_RS09610;Name=yedD;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=VMS06_RS09610 NZ_JAVXZI010000006.1 Protein Homology CDS 213998 214411 . - 0 ID=cds-WP_022648547.1;Parent=gene-VMS06_RS09610;Dbxref=GenBank:WP_022648547.1;Name=WP_022648547.1;gbkey=CDS;gene=yedD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432387.1;locus_tag=VMS06_RS09610;product=lipoprotein YedD;protein_id=WP_022648547.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 214644 214967 . - . ID=gene-VMS06_RS09615;Name=VMS06_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09615 NZ_JAVXZI010000006.1 Protein Homology CDS 214644 214967 . - 0 ID=cds-WP_063843757.1;Parent=gene-VMS06_RS09615;Dbxref=GenBank:WP_063843757.1;Name=WP_063843757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693216.1;locus_tag=VMS06_RS09615;product=hypothetical protein;protein_id=WP_063843757.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 214967 215206 . - . ID=gene-VMS06_RS09620;Name=VMS06_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09620 NZ_JAVXZI010000006.1 Protein Homology CDS 214967 215206 . - 0 ID=cds-WP_063843756.1;Parent=gene-VMS06_RS09620;Dbxref=GenBank:WP_063843756.1;Name=WP_063843756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808935.1;locus_tag=VMS06_RS09620;product=hypothetical protein;protein_id=WP_063843756.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 215319 215681 . + . ID=gene-VMS06_RS09625;Name=VMS06_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09625 NZ_JAVXZI010000006.1 Protein Homology CDS 215319 215681 . + 0 ID=cds-WP_045332015.1;Parent=gene-VMS06_RS09625;Dbxref=GenBank:WP_045332015.1;Name=WP_045332015.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706257.1;locus_tag=VMS06_RS09625;product=GtrA family protein;protein_id=WP_045332015.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 215678 216619 . + . ID=gene-VMS06_RS09630;Name=VMS06_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09630 NZ_JAVXZI010000006.1 Protein Homology CDS 215678 216619 . + 0 ID=cds-WP_032673203.1;Parent=gene-VMS06_RS09630;Dbxref=GenBank:WP_032673203.1;Name=WP_032673203.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882853.1;locus_tag=VMS06_RS09630;product=glycosyltransferase family 2 protein;protein_id=WP_032673203.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 216616 218097 . + . ID=gene-VMS06_RS09635;Name=VMS06_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09635 NZ_JAVXZI010000006.1 GeneMarkS-2+ CDS 216616 218097 . + 0 ID=cds-WP_063843755.1;Parent=gene-VMS06_RS09635;Dbxref=GenBank:WP_063843755.1;Name=WP_063843755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS09635;product=hypothetical protein;protein_id=WP_063843755.1;transl_table=11 NZ_JAVXZI010000006.1 RefSeq gene 218127 218981 . - . ID=gene-VMS06_RS09640;Name=VMS06_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09640 NZ_JAVXZI010000006.1 GeneMarkS-2+ CDS 218127 218981 . - 0 ID=cds-WP_420536422.1;Parent=gene-VMS06_RS09640;Dbxref=GenBank:WP_420536422.1;Name=WP_420536422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS09640;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_420536422.1;transl_table=11 ##sequence-region NZ_JAVXZI010000007.1 1 207455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000007.1 RefSeq region 1 207455 . + . ID=NZ_JAVXZI010000007.1:1..207455;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000007.1 RefSeq gene 249 938 . + . ID=gene-VMS06_RS09645;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=VMS06_RS09645 NZ_JAVXZI010000007.1 Protein Homology CDS 249 938 . + 0 ID=cds-WP_063147985.1;Parent=gene-VMS06_RS09645;Dbxref=GenBank:WP_063147985.1;Name=WP_063147985.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694344.1;locus_tag=VMS06_RS09645;product=enterobactin synthase subunit EntD;protein_id=WP_063147985.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 874 1713 . - . ID=gene-VMS06_RS09650;Name=VMS06_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09650 NZ_JAVXZI010000007.1 Protein Homology CDS 874 1713 . - 0 ID=cds-WP_022647370.1;Parent=gene-VMS06_RS09650;Dbxref=GenBank:WP_022647370.1;Name=WP_022647370.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571184.1;locus_tag=VMS06_RS09650;product=metal ABC transporter permease;protein_id=WP_022647370.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 1710 2558 . - . ID=gene-VMS06_RS09655;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=VMS06_RS09655 NZ_JAVXZI010000007.1 Protein Homology CDS 1710 2558 . - 0 ID=cds-WP_022647369.1;Parent=gene-VMS06_RS09655;Dbxref=GenBank:WP_022647369.1;Name=WP_022647369.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858817.1;locus_tag=VMS06_RS09655;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_022647369.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 2555 3361 . - . ID=gene-VMS06_RS09660;Name=sitB;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=VMS06_RS09660 NZ_JAVXZI010000007.1 Protein Homology CDS 2555 3361 . - 0 ID=cds-WP_063843853.1;Parent=gene-VMS06_RS09660;Dbxref=GenBank:WP_063843853.1;Name=WP_063843853.1;gbkey=CDS;gene=sitB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428383.1;locus_tag=VMS06_RS09660;product=iron/manganese ABC transporter ATP-binding protein SitB;protein_id=WP_063843853.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 3364 4275 . - . ID=gene-VMS06_RS09665;Name=sitA;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=VMS06_RS09665 NZ_JAVXZI010000007.1 Protein Homology CDS 3364 4275 . - 0 ID=cds-WP_063147983.1;Parent=gene-VMS06_RS09665;Dbxref=GenBank:WP_063147983.1;Name=WP_063147983.1;gbkey=CDS;gene=sitA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428381.1;locus_tag=VMS06_RS09665;product=iron/manganese ABC transporter substrate-binding protein SitA;protein_id=WP_063147983.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 4487 4771 . - . ID=gene-VMS06_RS09670;Name=nadS;gbkey=Gene;gene=nadS;gene_biotype=protein_coding;locus_tag=VMS06_RS09670 NZ_JAVXZI010000007.1 Protein Homology CDS 4487 4771 . - 0 ID=cds-WP_003858821.1;Parent=gene-VMS06_RS09670;Dbxref=GenBank:WP_003858821.1;Name=WP_003858821.1;gbkey=CDS;gene=nadS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858821.1;locus_tag=VMS06_RS09670;product=NadS family protein;protein_id=WP_003858821.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 4774 5160 . - . ID=gene-VMS06_RS09675;Name=VMS06_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09675 NZ_JAVXZI010000007.1 Protein Homology CDS 4774 5160 . - 0 ID=cds-WP_063147990.1;Parent=gene-VMS06_RS09675;Dbxref=GenBank:WP_063147990.1;Name=WP_063147990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015873600.1;locus_tag=VMS06_RS09675;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_063147990.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 5299 7332 . - . ID=gene-VMS06_RS09680;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=VMS06_RS09680 NZ_JAVXZI010000007.1 Protein Homology CDS 5299 7332 . - 0 ID=cds-WP_022647365.1;Parent=gene-VMS06_RS09680;Dbxref=GenBank:WP_022647365.1;Name=WP_022647365.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428379.1;locus_tag=VMS06_RS09680;product=choline BCCT transporter BetT;protein_id=WP_022647365.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 7461 8048 . + . ID=gene-VMS06_RS09685;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=VMS06_RS09685 NZ_JAVXZI010000007.1 Protein Homology CDS 7461 8048 . + 0 ID=cds-WP_023299544.1;Parent=gene-VMS06_RS09685;Dbxref=GenBank:WP_023299544.1;Name=WP_023299544.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414847.3;locus_tag=VMS06_RS09685;product=transcriptional regulator BetI;protein_id=WP_023299544.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 8062 9534 . + . ID=gene-VMS06_RS09690;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=VMS06_RS09690 NZ_JAVXZI010000007.1 Protein Homology CDS 8062 9534 . + 0 ID=cds-WP_063147982.1;Parent=gene-VMS06_RS09690;Dbxref=GenBank:WP_063147982.1;Name=WP_063147982.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414846.1;locus_tag=VMS06_RS09690;product=betaine-aldehyde dehydrogenase;protein_id=WP_063147982.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 9548 11212 . + . ID=gene-VMS06_RS09695;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=VMS06_RS09695 NZ_JAVXZI010000007.1 Protein Homology CDS 9548 11212 . + 0 ID=cds-WP_063147981.1;Parent=gene-VMS06_RS09695;Dbxref=GenBank:WP_063147981.1;Name=WP_063147981.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965712.1;locus_tag=VMS06_RS09695;product=choline dehydrogenase;protein_id=WP_063147981.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 11306 12004 . - . ID=gene-VMS06_RS09700;Name=VMS06_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09700 NZ_JAVXZI010000007.1 Protein Homology CDS 11306 12004 . - 0 ID=cds-WP_063147989.1;Parent=gene-VMS06_RS09700;Dbxref=GenBank:WP_063147989.1;Name=WP_063147989.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382534.1;locus_tag=VMS06_RS09700;product=GNAT family N-acetyltransferase;protein_id=WP_063147989.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 12112 12585 . - . ID=gene-VMS06_RS09705;Name=VMS06_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09705 NZ_JAVXZI010000007.1 Protein Homology CDS 12112 12585 . - 0 ID=cds-WP_022647360.1;Parent=gene-VMS06_RS09705;Dbxref=GenBank:WP_022647360.1;Name=WP_022647360.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809697.1;locus_tag=VMS06_RS09705;product=cold-shock protein;protein_id=WP_022647360.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 12716 13486 . - . ID=gene-VMS06_RS09710;Name=VMS06_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09710 NZ_JAVXZI010000007.1 Protein Homology CDS 12716 13486 . - 0 ID=cds-WP_022647359.1;Parent=gene-VMS06_RS09710;Dbxref=GenBank:WP_022647359.1;Name=WP_022647359.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase (NAD+) activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227341.1;locus_tag=VMS06_RS09710;product=(S)-acetoin forming diacetyl reductase;protein_id=WP_022647359.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 13507 15186 . - . ID=gene-VMS06_RS09715;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=VMS06_RS09715 NZ_JAVXZI010000007.1 Protein Homology CDS 13507 15186 . - 0 ID=cds-WP_063147980.1;Parent=gene-VMS06_RS09715;Dbxref=GenBank:WP_063147980.1;Name=WP_063147980.1;Ontology_term=GO:0034077,GO:0000287,GO:0003984,GO:0030976;gbkey=CDS;gene=alsS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=butanediol metabolic process|0034077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831010.1;locus_tag=VMS06_RS09715;product=acetolactate synthase AlsS;protein_id=WP_063147980.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 15200 15979 . - . ID=gene-VMS06_RS09720;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=VMS06_RS09720 NZ_JAVXZI010000007.1 Protein Homology CDS 15200 15979 . - 0 ID=cds-WP_088581799.1;Parent=gene-VMS06_RS09720;Dbxref=GenBank:WP_088581799.1;Name=WP_088581799.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882917.1;locus_tag=VMS06_RS09720;product=acetolactate decarboxylase;protein_id=WP_088581799.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 16085 16981 . + . ID=gene-VMS06_RS09725;Name=VMS06_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09725 NZ_JAVXZI010000007.1 Protein Homology CDS 16085 16981 . + 0 ID=cds-WP_063147979.1;Parent=gene-VMS06_RS09725;Dbxref=GenBank:WP_063147979.1;Name=WP_063147979.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882916.1;locus_tag=VMS06_RS09725;product=LysR family transcriptional regulator;protein_id=WP_063147979.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 17209 17421 . - . ID=gene-VMS06_RS09730;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=VMS06_RS09730 NZ_JAVXZI010000007.1 Protein Homology CDS 17209 17421 . - 0 ID=cds-WP_022647355.1;Parent=gene-VMS06_RS09730;Dbxref=GenBank:WP_022647355.1;Name=WP_022647355.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=VMS06_RS09730;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_022647355.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 18138 18245 . + . ID=gene-VMS06_RS22875;Name=VMS06_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22875 NZ_JAVXZI010000007.1 Protein Homology CDS 18138 18245 . + 0 ID=cds-WP_157843337.1;Parent=gene-VMS06_RS22875;Dbxref=GenBank:WP_157843337.1;Name=WP_157843337.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.7;locus_tag=VMS06_RS22875;product=ash family protein;protein_id=WP_157843337.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 18272 18727 . + . ID=gene-VMS06_RS09735;Name=VMS06_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09735 NZ_JAVXZI010000007.1 Protein Homology CDS 18272 18727 . + 0 ID=cds-WP_063147978.1;Parent=gene-VMS06_RS09735;Dbxref=GenBank:WP_063147978.1;Name=WP_063147978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499401.1;locus_tag=VMS06_RS09735;product=hypothetical protein;protein_id=WP_063147978.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 18928 19338 . + . ID=gene-VMS06_RS09740;Name=VMS06_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09740 NZ_JAVXZI010000007.1 Protein Homology CDS 18928 19338 . + 0 ID=cds-WP_023299534.1;Parent=gene-VMS06_RS09740;Dbxref=GenBank:WP_023299534.1;Name=WP_023299534.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804811.1;locus_tag=VMS06_RS09740;product=ASCH domain-containing protein;protein_id=WP_023299534.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 19559 19870 . + . ID=gene-VMS06_RS09745;Name=VMS06_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09745 NZ_JAVXZI010000007.1 Protein Homology CDS 19559 19870 . + 0 ID=cds-WP_063147977.1;Parent=gene-VMS06_RS09745;Dbxref=GenBank:WP_063147977.1;Name=WP_063147977.1;Ontology_term=GO:0090304,GO:0003723,GO:0004519,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA binding|0003723||IEA,endonuclease activity|0004519||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000558568.1;locus_tag=VMS06_RS09745;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_063147977.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 19867 20286 . + . ID=gene-VMS06_RS09750;Name=VMS06_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09750 NZ_JAVXZI010000007.1 Protein Homology CDS 19867 20286 . + 0 ID=cds-WP_063147976.1;Parent=gene-VMS06_RS09750;Dbxref=GenBank:WP_063147976.1;Name=WP_063147976.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809705.1;locus_tag=VMS06_RS09750;product=helix-turn-helix domain-containing protein;protein_id=WP_063147976.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 20554 21000 . - . ID=gene-VMS06_RS09755;Name=VMS06_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09755 NZ_JAVXZI010000007.1 Protein Homology CDS 20554 21000 . - 0 ID=cds-WP_063147975.1;Parent=gene-VMS06_RS09755;Dbxref=GenBank:WP_063147975.1;Name=WP_063147975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171103.1;locus_tag=VMS06_RS09755;product=hypothetical protein;protein_id=WP_063147975.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq pseudogene 21000 21611 . - . ID=gene-VMS06_RS09760;Name=VMS06_RS09760;end_range=21611,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS09760;partial=true;pseudo=true NZ_JAVXZI010000007.1 Protein Homology CDS 21000 21611 . - 0 ID=cds-VMS06_RS09760;Parent=gene-VMS06_RS09760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=21611,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303458.1;locus_tag=VMS06_RS09760;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 21703 22083 . - . ID=gene-VMS06_RS09765;Name=VMS06_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09765 NZ_JAVXZI010000007.1 Protein Homology CDS 21703 22083 . - 0 ID=cds-WP_045309197.1;Parent=gene-VMS06_RS09765;Dbxref=GenBank:WP_045309197.1;Name=WP_045309197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428345.1;locus_tag=VMS06_RS09765;product=hypothetical protein;protein_id=WP_045309197.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 22440 22844 . - . ID=gene-VMS06_RS09770;Name=VMS06_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09770 NZ_JAVXZI010000007.1 Protein Homology CDS 22440 22844 . - 0 ID=cds-WP_063147973.1;Parent=gene-VMS06_RS09770;Dbxref=GenBank:WP_063147973.1;Name=WP_063147973.1;Ontology_term=GO:0042546;gbkey=CDS;go_process=cell wall biogenesis|0042546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428344.1;locus_tag=VMS06_RS09770;product=SMI1/KNR4 family protein;protein_id=WP_063147973.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 23178 23600 . - . ID=gene-VMS06_RS09775;Name=VMS06_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09775 NZ_JAVXZI010000007.1 GeneMarkS-2+ CDS 23178 23600 . - 0 ID=cds-WP_250116668.1;Parent=gene-VMS06_RS09775;Dbxref=GenBank:WP_250116668.1;Name=WP_250116668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS09775;product=nuclease;protein_id=WP_250116668.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 23597 23764 . - . ID=gene-VMS06_RS09780;Name=VMS06_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09780 NZ_JAVXZI010000007.1 Protein Homology CDS 23597 23764 . - 0 ID=cds-WP_250116669.1;Parent=gene-VMS06_RS09780;Dbxref=GenBank:WP_250116669.1;Name=WP_250116669.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026973.6;locus_tag=VMS06_RS09780;product=hypothetical protein;protein_id=WP_250116669.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 24128 24430 . - . ID=gene-VMS06_RS09785;Name=VMS06_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09785 NZ_JAVXZI010000007.1 Protein Homology CDS 24128 24430 . - 0 ID=cds-WP_063147972.1;Parent=gene-VMS06_RS09785;Dbxref=GenBank:WP_063147972.1;Name=WP_063147972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428341.1;locus_tag=VMS06_RS09785;product=hypothetical protein;protein_id=WP_063147972.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 24438 28649 . - . ID=gene-VMS06_RS09790;Name=VMS06_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09790 NZ_JAVXZI010000007.1 Protein Homology CDS 24438 28649 . - 0 ID=cds-WP_226856326.1;Parent=gene-VMS06_RS09790;Dbxref=GenBank:WP_226856326.1;Name=WP_226856326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015344048.1;locus_tag=VMS06_RS09790;product=RHS repeat-associated core domain-containing protein;protein_id=WP_226856326.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 28667 29104 . - . ID=gene-VMS06_RS09795;Name=VMS06_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09795 NZ_JAVXZI010000007.1 Protein Homology CDS 28667 29104 . - 0 ID=cds-WP_038415594.1;Parent=gene-VMS06_RS09795;Dbxref=GenBank:WP_038415594.1;Name=WP_038415594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882888.1;locus_tag=VMS06_RS09795;product=DcrB-related protein;protein_id=WP_038415594.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 29222 30112 . - . ID=gene-VMS06_RS09800;Name=VMS06_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09800 NZ_JAVXZI010000007.1 Protein Homology CDS 29222 30112 . - 0 ID=cds-WP_063147971.1;Parent=gene-VMS06_RS09800;Dbxref=GenBank:WP_063147971.1;Name=WP_063147971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858865.1;locus_tag=VMS06_RS09800;product=oxidoreductase;protein_id=WP_063147971.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 30218 31339 . + . ID=gene-VMS06_RS09805;Name=VMS06_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09805 NZ_JAVXZI010000007.1 Protein Homology CDS 30218 31339 . + 0 ID=cds-WP_048965636.1;Parent=gene-VMS06_RS09805;Dbxref=GenBank:WP_048965636.1;Name=WP_048965636.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809711.1;locus_tag=VMS06_RS09805;product=YbdK family carboxylate-amine ligase;protein_id=WP_048965636.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 31269 34424 . - . ID=gene-VMS06_RS09810;Name=VMS06_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09810 NZ_JAVXZI010000007.1 Protein Homology CDS 31269 34424 . - 0 ID=cds-WP_023305632.1;Parent=gene-VMS06_RS09810;Dbxref=GenBank:WP_023305632.1;Name=WP_023305632.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382545.1;locus_tag=VMS06_RS09810;product=efflux RND transporter permease subunit;protein_id=WP_023305632.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 34434 35498 . - . ID=gene-VMS06_RS09815;Name=VMS06_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09815 NZ_JAVXZI010000007.1 Protein Homology CDS 34434 35498 . - 0 ID=cds-WP_063147970.1;Parent=gene-VMS06_RS09815;Dbxref=GenBank:WP_063147970.1;Name=WP_063147970.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571203.1;locus_tag=VMS06_RS09815;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_063147970.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 35610 38318 . - . ID=gene-VMS06_RS09820;Name=VMS06_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09820 NZ_JAVXZI010000007.1 Protein Homology CDS 35610 38318 . - 0 ID=cds-WP_048965784.1;Parent=gene-VMS06_RS09820;Dbxref=GenBank:WP_048965784.1;Name=WP_048965784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694367.1;locus_tag=VMS06_RS09820;product=cation-transporting P-type ATPase;protein_id=WP_048965784.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 38807 39055 . + . ID=gene-VMS06_RS09825;Name=VMS06_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09825 NZ_JAVXZI010000007.1 Protein Homology CDS 38807 39055 . + 0 ID=cds-WP_003858875.1;Parent=gene-VMS06_RS09825;Dbxref=GenBank:WP_003858875.1;Name=WP_003858875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428319.1;locus_tag=VMS06_RS09825;product=DUF1158 domain-containing protein;protein_id=WP_003858875.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 39041 40609 . - . ID=gene-VMS06_RS09830;Name=VMS06_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09830 NZ_JAVXZI010000007.1 Protein Homology CDS 39041 40609 . - 0 ID=cds-WP_063147969.1;Parent=gene-VMS06_RS09830;Dbxref=GenBank:WP_063147969.1;Name=WP_063147969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016481.1;locus_tag=VMS06_RS09830;product=alpha/beta hydrolase-fold protein;protein_id=WP_063147969.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 40732 42876 . + . ID=gene-VMS06_RS09835;Name=VMS06_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09835 NZ_JAVXZI010000007.1 Protein Homology CDS 40732 42876 . + 0 ID=cds-WP_063147968.1;Parent=gene-VMS06_RS09835;Dbxref=GenBank:WP_063147968.1;Name=WP_063147968.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130223.1;locus_tag=VMS06_RS09835;product=TonB-dependent siderophore receptor;protein_id=WP_063147968.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 42983 43324 . - . ID=gene-VMS06_RS09840;Name=VMS06_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09840 NZ_JAVXZI010000007.1 Protein Homology CDS 42983 43324 . - 0 ID=cds-WP_017694370.1;Parent=gene-VMS06_RS09840;Dbxref=GenBank:WP_017694370.1;Name=WP_017694370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225689.1;locus_tag=VMS06_RS09840;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_017694370.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 43357 44460 . - . ID=gene-VMS06_RS09845;Name=VMS06_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09845 NZ_JAVXZI010000007.1 Protein Homology CDS 43357 44460 . - 0 ID=cds-WP_063147967.1;Parent=gene-VMS06_RS09845;Dbxref=GenBank:WP_063147967.1;Name=WP_063147967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809718.1;locus_tag=VMS06_RS09845;product=RomA family MBL fold metallo-hydrolase;protein_id=WP_063147967.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 44653 45243 . + . ID=gene-VMS06_RS09850;Name=VMS06_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09850 NZ_JAVXZI010000007.1 Protein Homology CDS 44653 45243 . + 0 ID=cds-WP_023299509.1;Parent=gene-VMS06_RS09850;Dbxref=GenBank:WP_023299509.1;Name=WP_023299509.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882875.1;locus_tag=VMS06_RS09850;product=TetR/AcrR family transcriptional regulator;protein_id=WP_023299509.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 45233 45601 . + . ID=gene-VMS06_RS09855;Name=VMS06_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09855 NZ_JAVXZI010000007.1 Protein Homology CDS 45233 45601 . + 0 ID=cds-WP_022647330.1;Parent=gene-VMS06_RS09855;Dbxref=GenBank:WP_022647330.1;Name=WP_022647330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858883.1;locus_tag=VMS06_RS09855;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_022647330.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 45722 46375 . + . ID=gene-VMS06_RS09860;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=VMS06_RS09860 NZ_JAVXZI010000007.1 Protein Homology CDS 45722 46375 . + 0 ID=cds-WP_003858884.1;Parent=gene-VMS06_RS09860;Dbxref=GenBank:WP_003858884.1;Name=WP_003858884.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882873.1;locus_tag=VMS06_RS09860;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_003858884.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 46403 47005 . - . ID=gene-VMS06_RS09865;Name=VMS06_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09865 NZ_JAVXZI010000007.1 Protein Homology CDS 46403 47005 . - 0 ID=cds-WP_063147966.1;Parent=gene-VMS06_RS09865;Dbxref=GenBank:WP_063147966.1;Name=WP_063147966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499384.1;locus_tag=VMS06_RS09865;product=hypothetical protein;protein_id=WP_063147966.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 47159 48028 . - . ID=gene-VMS06_RS09870;Name=VMS06_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09870 NZ_JAVXZI010000007.1 Protein Homology CDS 47159 48028 . - 0 ID=cds-WP_022647328.1;Parent=gene-VMS06_RS09870;Dbxref=GenBank:WP_022647328.1;Name=WP_022647328.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168966.1;locus_tag=VMS06_RS09870;product=helix-turn-helix transcriptional regulator;protein_id=WP_022647328.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 48136 49572 . + . ID=gene-VMS06_RS09875;Name=VMS06_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09875 NZ_JAVXZI010000007.1 Protein Homology CDS 48136 49572 . + 0 ID=cds-WP_058646010.1;Parent=gene-VMS06_RS09875;Dbxref=GenBank:WP_058646010.1;Name=WP_058646010.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694372.1;locus_tag=VMS06_RS09875;product=MFS transporter;protein_id=WP_058646010.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 49640 50884 . + . ID=gene-VMS06_RS09880;Name=VMS06_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09880 NZ_JAVXZI010000007.1 Protein Homology CDS 49640 50884 . + 0 ID=cds-WP_023299505.1;Parent=gene-VMS06_RS09880;Dbxref=GenBank:WP_023299505.1;Name=WP_023299505.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858888.1;locus_tag=VMS06_RS09880;product=mechanosensitive ion channel family protein;protein_id=WP_023299505.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 50885 51856 . - . ID=gene-VMS06_RS09885;Name=VMS06_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09885 NZ_JAVXZI010000007.1 Protein Homology CDS 50885 51856 . - 0 ID=cds-WP_063147965.1;Parent=gene-VMS06_RS09885;Dbxref=GenBank:WP_063147965.1;Name=WP_063147965.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830961.1;locus_tag=VMS06_RS09885;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_063147965.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 51932 53074 . - . ID=gene-VMS06_RS09890;Name=VMS06_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09890 NZ_JAVXZI010000007.1 Protein Homology CDS 51932 53074 . - 0 ID=cds-WP_063147964.1;Parent=gene-VMS06_RS09890;Dbxref=GenBank:WP_063147964.1;Name=WP_063147964.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694373.1;locus_tag=VMS06_RS09890;product=Gfo/Idh/MocA family protein;protein_id=WP_063147964.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 53067 54092 . - . ID=gene-VMS06_RS09895;Name=VMS06_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09895 NZ_JAVXZI010000007.1 Protein Homology CDS 53067 54092 . - 0 ID=cds-WP_063147963.1;Parent=gene-VMS06_RS09895;Dbxref=GenBank:WP_063147963.1;Name=WP_063147963.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694374.1;locus_tag=VMS06_RS09895;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_063147963.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 54108 55343 . - . ID=gene-VMS06_RS09900;Name=VMS06_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09900 NZ_JAVXZI010000007.1 Protein Homology CDS 54108 55343 . - 0 ID=cds-WP_023299501.1;Parent=gene-VMS06_RS09900;Dbxref=GenBank:WP_023299501.1;Name=WP_023299501.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571216.1;locus_tag=VMS06_RS09900;product=MFS transporter;protein_id=WP_023299501.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 55660 57045 . - . ID=gene-VMS06_RS09905;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=VMS06_RS09905 NZ_JAVXZI010000007.1 Protein Homology CDS 55660 57045 . - 0 ID=cds-WP_022647321.1;Parent=gene-VMS06_RS09905;Dbxref=GenBank:WP_022647321.1;Name=WP_022647321.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069215.1;locus_tag=VMS06_RS09905;product=phenylalanine transporter;protein_id=WP_022647321.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 57148 59121 . - . ID=gene-VMS06_RS09910;Name=VMS06_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09910 NZ_JAVXZI010000007.1 Protein Homology CDS 57148 59121 . - 0 ID=cds-WP_063147962.1;Parent=gene-VMS06_RS09910;Dbxref=GenBank:WP_063147962.1;Name=WP_063147962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382560.1;locus_tag=VMS06_RS09910;product=PhoX family protein;protein_id=WP_063147962.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 59249 61432 . - . ID=gene-VMS06_RS09915;Name=VMS06_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09915 NZ_JAVXZI010000007.1 Protein Homology CDS 59249 61432 . - 0 ID=cds-WP_023299498.1;Parent=gene-VMS06_RS09915;Dbxref=GenBank:WP_023299498.1;Name=WP_023299498.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858897.1;locus_tag=VMS06_RS09915;product=TonB-dependent receptor;protein_id=WP_023299498.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 61633 61908 . - . ID=gene-VMS06_RS09920;Name=yahO;gbkey=Gene;gene=yahO;gene_biotype=protein_coding;locus_tag=VMS06_RS09920 NZ_JAVXZI010000007.1 Protein Homology CDS 61633 61908 . - 0 ID=cds-WP_022647318.1;Parent=gene-VMS06_RS09920;Dbxref=GenBank:WP_022647318.1;Name=WP_022647318.1;gbkey=CDS;gene=yahO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000848022.1;locus_tag=VMS06_RS09920;product=DUF1471 family periplasmic protein YahO;protein_id=WP_022647318.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 62058 62777 . - . ID=gene-VMS06_RS09925;Name=VMS06_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09925 NZ_JAVXZI010000007.1 Protein Homology CDS 62058 62777 . - 0 ID=cds-WP_023305620.1;Parent=gene-VMS06_RS09925;Dbxref=GenBank:WP_023305620.1;Name=WP_023305620.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017940.6;locus_tag=VMS06_RS09925;product=lipopolysaccharide core heptose(II) kinase RfaY;protein_id=WP_023305620.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 62788 63216 . - . ID=gene-VMS06_RS09930;Name=VMS06_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09930 NZ_JAVXZI010000007.1 Protein Homology CDS 62788 63216 . - 0 ID=cds-WP_045621279.1;Parent=gene-VMS06_RS09930;Dbxref=GenBank:WP_045621279.1;Name=WP_045621279.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366127.1;locus_tag=VMS06_RS09930;product=glycine zipper 2TM domain-containing protein;protein_id=WP_045621279.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 63525 63815 . + . ID=gene-VMS06_RS09935;Name=VMS06_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09935 NZ_JAVXZI010000007.1 Protein Homology CDS 63525 63815 . + 0 ID=cds-WP_022647314.1;Parent=gene-VMS06_RS09935;Dbxref=GenBank:WP_022647314.1;Name=WP_022647314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367134.1;locus_tag=VMS06_RS09935;product=hypothetical protein;protein_id=WP_022647314.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 63945 64021 . - . ID=gene-VMS06_RS09940;Name=VMS06_RS09940;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS09940 NZ_JAVXZI010000007.1 tRNAscan-SE tRNA 63945 64021 . - . ID=rna-VMS06_RS09940;Parent=gene-VMS06_RS09940;anticodon=(pos:complement(63985..63987));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS09940;product=tRNA-Arg NZ_JAVXZI010000007.1 tRNAscan-SE exon 63945 64021 . - . ID=exon-VMS06_RS09940-1;Parent=rna-VMS06_RS09940;anticodon=(pos:complement(63985..63987));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS09940;product=tRNA-Arg NZ_JAVXZI010000007.1 RefSeq gene 64325 64987 . + . ID=gene-VMS06_RS09945;Name=VMS06_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09945 NZ_JAVXZI010000007.1 Protein Homology CDS 64325 64987 . + 0 ID=cds-WP_032670951.1;Parent=gene-VMS06_RS09945;Dbxref=GenBank:WP_032670951.1;Name=WP_032670951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383241.1;locus_tag=VMS06_RS09945;product=EAL domain-containing protein;protein_id=WP_032670951.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 65012 65728 . + . ID=gene-VMS06_RS09950;Name=VMS06_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09950 NZ_JAVXZI010000007.1 Protein Homology CDS 65012 65728 . + 0 ID=cds-WP_023299489.1;Parent=gene-VMS06_RS09950;Dbxref=GenBank:WP_023299489.1;Name=WP_023299489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383240.1;locus_tag=VMS06_RS09950;product=helix-turn-helix domain-containing protein;protein_id=WP_023299489.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 66535 67167 . + . ID=gene-VMS06_RS09955;Name=fimZ;gbkey=Gene;gene=fimZ;gene_biotype=protein_coding;locus_tag=VMS06_RS09955 NZ_JAVXZI010000007.1 Protein Homology CDS 66535 67167 . + 0 ID=cds-WP_022647311.1;Parent=gene-VMS06_RS09955;Dbxref=GenBank:WP_022647311.1;Name=WP_022647311.1;gbkey=CDS;gene=fimZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459544.1;locus_tag=VMS06_RS09955;product=fimbria biosynthesis transcriptional regulator FimZ;protein_id=WP_022647311.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 67218 67739 . - . ID=gene-VMS06_RS09960;Name=sfmF;gbkey=Gene;gene=sfmF;gene_biotype=protein_coding;locus_tag=VMS06_RS09960 NZ_JAVXZI010000007.1 Protein Homology CDS 67218 67739 . - 0 ID=cds-WP_022647310.1;Parent=gene-VMS06_RS09960;Dbxref=GenBank:WP_022647310.1;Name=WP_022647310.1;gbkey=CDS;gene=sfmF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383239.1;locus_tag=VMS06_RS09960;product=fimbria assembly protein;protein_id=WP_022647310.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 67749 68756 . - . ID=gene-VMS06_RS09965;Name=fimH;gbkey=Gene;gene=fimH;gene_biotype=protein_coding;locus_tag=VMS06_RS09965 NZ_JAVXZI010000007.1 Protein Homology CDS 67749 68756 . - 0 ID=cds-WP_022647309.1;Parent=gene-VMS06_RS09965;Dbxref=GenBank:WP_022647309.1;Name=WP_022647309.1;Ontology_term=GO:0007155;gbkey=CDS;gene=fimH;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694376.1;locus_tag=VMS06_RS09965;product=type 1 fimbria D-mannose specific adhesin FimH;protein_id=WP_022647309.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 68749 71307 . - . ID=gene-VMS06_RS09970;Name=VMS06_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS09970 NZ_JAVXZI010000007.1 Protein Homology CDS 68749 71307 . - 0 ID=cds-WP_063147960.1;Parent=gene-VMS06_RS09970;Dbxref=GenBank:WP_063147960.1;Name=WP_063147960.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809813.1;locus_tag=VMS06_RS09970;product=fimbrial biogenesis usher protein;protein_id=WP_063147960.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 71322 72014 . - . ID=gene-VMS06_RS09975;Name=fimC;gbkey=Gene;gene=fimC;gene_biotype=protein_coding;locus_tag=VMS06_RS09975 NZ_JAVXZI010000007.1 Protein Homology CDS 71322 72014 . - 0 ID=cds-WP_022647307.1;Parent=gene-VMS06_RS09975;Dbxref=GenBank:WP_022647307.1;Name=WP_022647307.1;gbkey=CDS;gene=fimC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095932.1;locus_tag=VMS06_RS09975;product=type 1 fimbria chaperone FimC;protein_id=WP_022647307.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 72049 72591 . - . ID=gene-VMS06_RS09980;Name=fimI;gbkey=Gene;gene=fimI;gene_biotype=protein_coding;locus_tag=VMS06_RS09980 NZ_JAVXZI010000007.1 Protein Homology CDS 72049 72591 . - 0 ID=cds-WP_023305613.1;Parent=gene-VMS06_RS09980;Dbxref=GenBank:WP_023305613.1;Name=WP_023305613.1;gbkey=CDS;gene=fimI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885157.1;locus_tag=VMS06_RS09980;product=type 1 fimbrial protein subunit FimI;protein_id=WP_023305613.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 72661 73224 . - . ID=gene-VMS06_RS09985;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=VMS06_RS09985 NZ_JAVXZI010000007.1 Protein Homology CDS 72661 73224 . - 0 ID=cds-WP_022647305.1;Parent=gene-VMS06_RS09985;Dbxref=GenBank:WP_022647305.1;Name=WP_022647305.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858911.1;locus_tag=VMS06_RS09985;product=type 1 fimbrial major subunit FimA;protein_id=WP_022647305.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 73535 74401 . + . ID=gene-VMS06_RS09990;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=VMS06_RS09990 NZ_JAVXZI010000007.1 Protein Homology CDS 73535 74401 . + 0 ID=cds-WP_008499332.1;Parent=gene-VMS06_RS09990;Dbxref=GenBank:WP_008499332.1;Name=WP_008499332.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225533.1;locus_tag=VMS06_RS09990;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_008499332.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 74404 74616 . + . ID=gene-VMS06_RS09995;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=VMS06_RS09995 NZ_JAVXZI010000007.1 Protein Homology CDS 74404 74616 . + 0 ID=cds-WP_022647303.1;Parent=gene-VMS06_RS09995;Dbxref=GenBank:WP_022647303.1;Name=WP_022647303.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225532.1;locus_tag=VMS06_RS09995;product=ribosome-associated protein YbcJ;protein_id=WP_022647303.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 74898 76397 . + . ID=gene-VMS06_RS10000;Name=VMS06_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10000 NZ_JAVXZI010000007.1 Protein Homology CDS 74898 76397 . + 0 ID=cds-WP_003858916.1;Parent=gene-VMS06_RS10000;Dbxref=GenBank:WP_003858916.1;Name=WP_003858916.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016388.1;locus_tag=VMS06_RS10000;product=PTS transporter subunit EIIC;protein_id=WP_003858916.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 76481 77497 . + . ID=gene-VMS06_RS10005;Name=malI;gbkey=Gene;gene=malI;gene_biotype=protein_coding;locus_tag=VMS06_RS10005 NZ_JAVXZI010000007.1 Protein Homology CDS 76481 77497 . + 0 ID=cds-WP_023299483.1;Parent=gene-VMS06_RS10005;Dbxref=GenBank:WP_023299483.1;Name=WP_023299483.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=malI;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176983.1;locus_tag=VMS06_RS10005;product=Mal regulon transcriptional regulator MalI;protein_id=WP_023299483.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 77571 78095 . + . ID=gene-VMS06_RS10010;Name=VMS06_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10010 NZ_JAVXZI010000007.1 Protein Homology CDS 77571 78095 . + 0 ID=cds-WP_045307898.1;Parent=gene-VMS06_RS10010;Dbxref=GenBank:WP_045307898.1;Name=WP_045307898.1;Ontology_term=GO:0016787,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809821.1;locus_tag=VMS06_RS10010;product=metal-dependent hydrolase;protein_id=WP_045307898.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 78182 79567 . - . ID=gene-VMS06_RS10015;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=VMS06_RS10015 NZ_JAVXZI010000007.1 Protein Homology CDS 78182 79567 . - 0 ID=cds-WP_023305609.1;Parent=gene-VMS06_RS10015;Dbxref=GenBank:WP_023305609.1;Name=WP_023305609.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=VMS06_RS10015;product=cysteine--tRNA ligase;protein_id=WP_023305609.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 79743 80237 . + . ID=gene-VMS06_RS10020;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=VMS06_RS10020 NZ_JAVXZI010000007.1 Protein Homology CDS 79743 80237 . + 0 ID=cds-WP_000256009.1;Parent=gene-VMS06_RS10020;Dbxref=GenBank:WP_000256009.1;Name=WP_000256009.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=VMS06_RS10020;product=peptidylprolyl isomerase B;protein_id=WP_000256009.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 80241 80963 . + . ID=gene-VMS06_RS10025;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=VMS06_RS10025 NZ_JAVXZI010000007.1 Protein Homology CDS 80241 80963 . + 0 ID=cds-WP_038415557.1;Parent=gene-VMS06_RS10025;Dbxref=GenBank:WP_038415557.1;Name=WP_038415557.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225529.1;locus_tag=VMS06_RS10025;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_038415557.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 81082 81591 . + . ID=gene-VMS06_RS10030;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=VMS06_RS10030 NZ_JAVXZI010000007.1 Protein Homology CDS 81082 81591 . + 0 ID=cds-WP_023299481.1;Parent=gene-VMS06_RS10030;Dbxref=GenBank:WP_023299481.1;Name=WP_023299481.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308612.1;locus_tag=VMS06_RS10030;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_023299481.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 81588 82655 . + . ID=gene-VMS06_RS10035;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=VMS06_RS10035 NZ_JAVXZI010000007.1 Protein Homology CDS 81588 82655 . + 0 ID=cds-WP_063147959.1;Parent=gene-VMS06_RS10035;Dbxref=GenBank:WP_063147959.1;Name=WP_063147959.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125239.1;locus_tag=VMS06_RS10035;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_063147959.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 82739 83809 . + . ID=gene-VMS06_RS10040;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=VMS06_RS10040 NZ_JAVXZI010000007.1 Protein Homology CDS 82739 83809 . + 0 ID=cds-WP_063147958.1;Parent=gene-VMS06_RS10040;Dbxref=GenBank:WP_063147958.1;Name=WP_063147958.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830929.1;locus_tag=VMS06_RS10040;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_063147958.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 83897 85042 . - . ID=gene-VMS06_RS10045;Name=VMS06_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10045 NZ_JAVXZI010000007.1 Protein Homology CDS 83897 85042 . - 0 ID=cds-WP_022647296.1;Parent=gene-VMS06_RS10045;Dbxref=GenBank:WP_022647296.1;Name=WP_022647296.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459504.1;locus_tag=VMS06_RS10045;product=porin;protein_id=WP_022647296.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 85225 87639 . - . ID=gene-VMS06_RS10050;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=VMS06_RS10050 NZ_JAVXZI010000007.1 Protein Homology CDS 85225 87639 . - 0 ID=cds-WP_063147957.1;Parent=gene-VMS06_RS10050;Dbxref=GenBank:WP_063147957.1;Name=WP_063147957.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008783994.1;locus_tag=VMS06_RS10050;product=putative ABC transporter permease subunit YbbP;protein_id=WP_063147957.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 87636 88322 . - . ID=gene-VMS06_RS10055;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=VMS06_RS10055 NZ_JAVXZI010000007.1 Protein Homology CDS 87636 88322 . - 0 ID=cds-WP_023299477.1;Parent=gene-VMS06_RS10055;Dbxref=GenBank:WP_023299477.1;Name=WP_023299477.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415028.1;locus_tag=VMS06_RS10055;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_023299477.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 88293 88925 . + . ID=gene-VMS06_RS10060;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=VMS06_RS10060 NZ_JAVXZI010000007.1 Protein Homology CDS 88293 88925 . + 0 ID=cds-WP_003858933.1;Parent=gene-VMS06_RS10060;Dbxref=GenBank:WP_003858933.1;Name=WP_003858933.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858933.1;locus_tag=VMS06_RS10060;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_003858933.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 88906 89715 . + . ID=gene-VMS06_RS10065;Name=VMS06_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10065 NZ_JAVXZI010000007.1 Protein Homology CDS 88906 89715 . + 0 ID=cds-WP_096216772.1;Parent=gene-VMS06_RS10065;Dbxref=GenBank:WP_096216772.1;Name=WP_096216772.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176971.1;locus_tag=VMS06_RS10065;product=SDR family oxidoreductase;protein_id=WP_096216772.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 89774 90628 . + . ID=gene-VMS06_RS10070;Name=VMS06_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10070 NZ_JAVXZI010000007.1 Protein Homology CDS 89774 90628 . + 0 ID=cds-WP_022647291.1;Parent=gene-VMS06_RS10070;Dbxref=GenBank:WP_022647291.1;Name=WP_022647291.1;Ontology_term=GO:0006457,GO:0034599,GO:0005515,GO:0051082;gbkey=CDS;go_function=protein binding|0005515||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,cellular response to oxidative stress|0034599||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459499.1;locus_tag=VMS06_RS10070;product=co-chaperone YbbN;protein_id=WP_022647291.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 90678 91460 . - . ID=gene-VMS06_RS10075;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=VMS06_RS10075 NZ_JAVXZI010000007.1 Protein Homology CDS 90678 91460 . - 0 ID=cds-WP_022647290.1;Parent=gene-VMS06_RS10075;Dbxref=GenBank:WP_022647290.1;Name=WP_022647290.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499315.1;locus_tag=VMS06_RS10075;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_022647290.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 91453 92124 . - . ID=gene-VMS06_RS10080;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=VMS06_RS10080 NZ_JAVXZI010000007.1 Protein Homology CDS 91453 92124 . - 0 ID=cds-WP_063147956.1;Parent=gene-VMS06_RS10080;Dbxref=GenBank:WP_063147956.1;Name=WP_063147956.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571235.1;locus_tag=VMS06_RS10080;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_063147956.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 92267 93121 . + . ID=gene-VMS06_RS10085;Name=VMS06_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10085 NZ_JAVXZI010000007.1 Protein Homology CDS 92267 93121 . + 0 ID=cds-WP_022647288.1;Parent=gene-VMS06_RS10085;Dbxref=GenBank:WP_022647288.1;Name=WP_022647288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571236.1;locus_tag=VMS06_RS10085;product=hypothetical protein;protein_id=WP_022647288.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 93276 94190 . + . ID=gene-VMS06_RS10090;Name=VMS06_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10090 NZ_JAVXZI010000007.1 Protein Homology CDS 93276 94190 . + 0 ID=cds-WP_003858941.1;Parent=gene-VMS06_RS10090;Dbxref=GenBank:WP_003858941.1;Name=WP_003858941.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858941.1;locus_tag=VMS06_RS10090;product=SPFH domain-containing protein;protein_id=WP_003858941.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 94187 94639 . + . ID=gene-VMS06_RS10095;Name=VMS06_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10095 NZ_JAVXZI010000007.1 Protein Homology CDS 94187 94639 . + 0 ID=cds-WP_023305604.1;Parent=gene-VMS06_RS10095;Dbxref=GenBank:WP_023305604.1;Name=WP_023305604.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571238.1;locus_tag=VMS06_RS10095;product=NfeD family protein;protein_id=WP_023305604.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 94636 95046 . - . ID=gene-VMS06_RS10100;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=VMS06_RS10100 NZ_JAVXZI010000007.1 Protein Homology CDS 94636 95046 . - 0 ID=cds-WP_017383222.1;Parent=gene-VMS06_RS10100;Dbxref=GenBank:WP_017383222.1;Name=WP_017383222.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428217.1;locus_tag=VMS06_RS10100;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_017383222.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 95155 97653 . + . ID=gene-VMS06_RS10105;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=VMS06_RS10105 NZ_JAVXZI010000007.1 Protein Homology CDS 95155 97653 . + 0 ID=cds-WP_063843850.1;Parent=gene-VMS06_RS10105;Dbxref=GenBank:WP_063843850.1;Name=WP_063843850.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459493.1;locus_tag=VMS06_RS10105;product=copper-exporting P-type ATPase CopA;protein_id=WP_063843850.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 97757 98551 . + . ID=gene-VMS06_RS10110;Name=VMS06_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10110 NZ_JAVXZI010000007.1 Protein Homology CDS 97757 98551 . + 0 ID=cds-WP_023299471.1;Parent=gene-VMS06_RS10110;Dbxref=GenBank:WP_023299471.1;Name=WP_023299471.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428208.1;locus_tag=VMS06_RS10110;product=TraB/GumN family protein;protein_id=WP_023299471.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 98750 99229 . + . ID=gene-VMS06_RS10115;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=VMS06_RS10115 NZ_JAVXZI010000007.1 Protein Homology CDS 98750 99229 . + 0 ID=cds-WP_010428207.1;Parent=gene-VMS06_RS10115;Dbxref=GenBank:WP_010428207.1;Name=WP_010428207.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=VMS06_RS10115;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_010428207.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 99351 101003 . - . ID=gene-VMS06_RS10120;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=VMS06_RS10120 NZ_JAVXZI010000007.1 Protein Homology CDS 99351 101003 . - 0 ID=cds-WP_063147922.1;Parent=gene-VMS06_RS10120;Dbxref=GenBank:WP_063147922.1;Name=WP_063147922.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095904.1;locus_tag=VMS06_RS10120;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_063147922.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 101168 102388 . + . ID=gene-VMS06_RS10125;Name=VMS06_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10125 NZ_JAVXZI010000007.1 Protein Homology CDS 101168 102388 . + 0 ID=cds-WP_022647282.1;Parent=gene-VMS06_RS10125;Dbxref=GenBank:WP_022647282.1;Name=WP_022647282.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459488.1;locus_tag=VMS06_RS10125;product=MFS transporter;protein_id=WP_022647282.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 102621 104297 . + . ID=gene-VMS06_RS10130;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=VMS06_RS10130 NZ_JAVXZI010000007.1 Protein Homology CDS 102621 104297 . + 0 ID=cds-WP_022647281.1;Parent=gene-VMS06_RS10130;Dbxref=GenBank:WP_022647281.1;Name=WP_022647281.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225505.1;locus_tag=VMS06_RS10130;product=YbaL family putative K(+) efflux transporter;protein_id=WP_022647281.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 104404 105708 . - . ID=gene-VMS06_RS10135;Name=VMS06_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10135 NZ_JAVXZI010000007.1 Protein Homology CDS 104404 105708 . - 0 ID=cds-WP_022647280.1;Parent=gene-VMS06_RS10135;Dbxref=GenBank:WP_022647280.1;Name=WP_022647280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=VMS06_RS10135;product=inosine/guanosine kinase;protein_id=WP_022647280.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 105771 106733 . - . ID=gene-VMS06_RS10140;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=VMS06_RS10140 NZ_JAVXZI010000007.1 Protein Homology CDS 105771 106733 . - 0 ID=cds-WP_017383216.1;Parent=gene-VMS06_RS10140;Dbxref=GenBank:WP_017383216.1;Name=WP_017383216.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225503.1;locus_tag=VMS06_RS10140;product=ferrochelatase;protein_id=WP_017383216.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 106858 107502 . - . ID=gene-VMS06_RS10145;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=VMS06_RS10145 NZ_JAVXZI010000007.1 Protein Homology CDS 106858 107502 . - 0 ID=cds-WP_006809841.1;Parent=gene-VMS06_RS10145;Dbxref=GenBank:WP_006809841.1;Name=WP_006809841.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=VMS06_RS10145;product=adenylate kinase;protein_id=WP_006809841.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 107732 109606 . - . ID=gene-VMS06_RS10150;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=VMS06_RS10150 NZ_JAVXZI010000007.1 Protein Homology CDS 107732 109606 . - 0 ID=cds-WP_015571245.1;Parent=gene-VMS06_RS10150;Dbxref=GenBank:WP_015571245.1;Name=WP_015571245.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003903109.1;locus_tag=VMS06_RS10150;product=molecular chaperone HtpG;protein_id=WP_015571245.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 109717 110322 . - . ID=gene-VMS06_RS10155;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=VMS06_RS10155 NZ_JAVXZI010000007.1 Protein Homology CDS 109717 110322 . - 0 ID=cds-WP_006809843.1;Parent=gene-VMS06_RS10155;Dbxref=GenBank:WP_006809843.1;Name=WP_006809843.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225500.1;locus_tag=VMS06_RS10155;product=recombination mediator RecR;protein_id=WP_006809843.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 110322 110654 . - . ID=gene-VMS06_RS10160;Name=VMS06_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10160 NZ_JAVXZI010000007.1 Protein Homology CDS 110322 110654 . - 0 ID=cds-WP_003858972.1;Parent=gene-VMS06_RS10160;Dbxref=GenBank:WP_003858972.1;Name=WP_003858972.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386900.1;locus_tag=VMS06_RS10160;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_003858972.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 110708 112636 . - . ID=gene-VMS06_RS10165;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=VMS06_RS10165 NZ_JAVXZI010000007.1 Protein Homology CDS 110708 112636 . - 0 ID=cds-WP_023299467.1;Parent=gene-VMS06_RS10165;Dbxref=GenBank:WP_023299467.1;Name=WP_023299467.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308550.1;locus_tag=VMS06_RS10165;product=DNA polymerase III subunit gamma/tau;protein_id=WP_023299467.1;transl_table=11 NZ_JAVXZI010000007.1 cmsearch sequence_feature 111314 111378 . - . ID=id-VMS06_RS10165;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS10165 NZ_JAVXZI010000007.1 RefSeq gene 112725 113276 . - . ID=gene-VMS06_RS10170;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=VMS06_RS10170 NZ_JAVXZI010000007.1 Protein Homology CDS 112725 113276 . - 0 ID=cds-WP_000127359.1;Parent=gene-VMS06_RS10170;Dbxref=GenBank:WP_000127359.1;Name=WP_000127359.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=VMS06_RS10170;product=adenine phosphoribosyltransferase;protein_id=WP_000127359.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 113428 113805 . - . ID=gene-VMS06_RS10175;Name=VMS06_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10175 NZ_JAVXZI010000007.1 Protein Homology CDS 113428 113805 . - 0 ID=cds-WP_001189855.1;Parent=gene-VMS06_RS10175;Dbxref=GenBank:WP_001189855.1;Name=WP_001189855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095896.1;locus_tag=VMS06_RS10175;product=DUF454 family protein;protein_id=WP_001189855.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 113856 114383 . + . ID=gene-VMS06_RS10180;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=VMS06_RS10180 NZ_JAVXZI010000007.1 Protein Homology CDS 113856 114383 . + 0 ID=cds-WP_022647276.1;Parent=gene-VMS06_RS10180;Dbxref=GenBank:WP_022647276.1;Name=WP_022647276.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499295.1;locus_tag=VMS06_RS10180;product=primosomal replication protein N'';protein_id=WP_022647276.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 114396 114590 . + . ID=gene-VMS06_RS10185;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=VMS06_RS10185 NZ_JAVXZI010000007.1 Protein Homology CDS 114396 114590 . + 0 ID=cds-WP_022647275.1;Parent=gene-VMS06_RS10185;Dbxref=GenBank:WP_022647275.1;Name=WP_022647275.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885184.1;locus_tag=VMS06_RS10185;product=pleiotropic regulatory protein RsmS;protein_id=WP_022647275.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 114624 118001 . - . ID=gene-VMS06_RS10190;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=VMS06_RS10190 NZ_JAVXZI010000007.1 Protein Homology CDS 114624 118001 . - 0 ID=cds-WP_058676944.1;Parent=gene-VMS06_RS10190;Dbxref=GenBank:WP_058676944.1;Name=WP_058676944.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069161.1;locus_tag=VMS06_RS10190;product=mechanosensitive channel MscK;protein_id=WP_058676944.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 118115 118768 . - . ID=gene-VMS06_RS10195;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=VMS06_RS10195 NZ_JAVXZI010000007.1 Protein Homology CDS 118115 118768 . - 0 ID=cds-WP_032621623.1;Parent=gene-VMS06_RS10195;Dbxref=GenBank:WP_032621623.1;Name=WP_032621623.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571247.1;locus_tag=VMS06_RS10195;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_032621623.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 118910 120103 . + . ID=gene-VMS06_RS10200;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=VMS06_RS10200 NZ_JAVXZI010000007.1 Protein Homology CDS 118910 120103 . + 0 ID=cds-WP_022647272.1;Parent=gene-VMS06_RS10200;Dbxref=GenBank:WP_022647272.1;Name=WP_022647272.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308543.1;locus_tag=VMS06_RS10200;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_022647272.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 120126 123272 . + . ID=gene-VMS06_RS10205;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=VMS06_RS10205 NZ_JAVXZI010000007.1 Protein Homology CDS 120126 123272 . + 0 ID=cds-WP_023299464.1;Parent=gene-VMS06_RS10205;Dbxref=GenBank:WP_023299464.1;Name=WP_023299464.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001132469.1;locus_tag=VMS06_RS10205;product=multidrug efflux RND transporter permease subunit AcrB;protein_id=WP_023299464.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 123782 124156 . + . ID=gene-VMS06_RS10210;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=VMS06_RS10210 NZ_JAVXZI010000007.1 Protein Homology CDS 123782 124156 . + 0 ID=cds-WP_006809850.1;Parent=gene-VMS06_RS10210;Dbxref=GenBank:WP_006809850.1;Name=WP_006809850.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001741190.1;locus_tag=VMS06_RS10210;product=Hha toxicity modulator TomB;protein_id=WP_006809850.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 124185 124403 . + . ID=gene-VMS06_RS10215;Name=VMS06_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10215 NZ_JAVXZI010000007.1 Protein Homology CDS 124185 124403 . + 0 ID=cds-WP_015571250.1;Parent=gene-VMS06_RS10215;Dbxref=GenBank:WP_015571250.1;Name=WP_015571250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308540.1;locus_tag=VMS06_RS10215;product=HHA domain-containing protein;protein_id=WP_015571250.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 124611 125162 . + . ID=gene-VMS06_RS10220;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=VMS06_RS10220 NZ_JAVXZI010000007.1 Protein Homology CDS 124611 125162 . + 0 ID=cds-WP_023305596.1;Parent=gene-VMS06_RS10220;Dbxref=GenBank:WP_023305596.1;Name=WP_023305596.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149711.1;locus_tag=VMS06_RS10220;product=maltose O-acetyltransferase;protein_id=WP_023305596.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 125279 125746 . + . ID=gene-VMS06_RS10225;Name=VMS06_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10225 NZ_JAVXZI010000007.1 Protein Homology CDS 125279 125746 . + 0 ID=cds-WP_022647269.1;Parent=gene-VMS06_RS10225;Dbxref=GenBank:WP_022647269.1;Name=WP_022647269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571252.1;locus_tag=VMS06_RS10225;product=YlaC family protein;protein_id=WP_022647269.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 125718 127178 . - . ID=gene-VMS06_RS10230;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=VMS06_RS10230 NZ_JAVXZI010000007.1 Protein Homology CDS 125718 127178 . - 0 ID=cds-WP_023299463.1;Parent=gene-VMS06_RS10230;Dbxref=GenBank:WP_023299463.1;Name=WP_023299463.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694397.1;locus_tag=VMS06_RS10230;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_023299463.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 127281 127991 . + . ID=gene-VMS06_RS10235;Name=VMS06_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10235 NZ_JAVXZI010000007.1 Protein Homology CDS 127281 127991 . + 0 ID=cds-WP_046620525.1;Parent=gene-VMS06_RS10235;Dbxref=GenBank:WP_046620525.1;Name=WP_046620525.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499283.1;locus_tag=VMS06_RS10235;product=GNAT family N-acetyltransferase;protein_id=WP_046620525.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 127988 128128 . - . ID=gene-VMS06_RS10240;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=VMS06_RS10240 NZ_JAVXZI010000007.1 Protein Homology CDS 127988 128128 . - 0 ID=cds-WP_003859006.1;Parent=gene-VMS06_RS10240;Dbxref=GenBank:WP_003859006.1;Name=WP_003859006.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=VMS06_RS10240;product=type B 50S ribosomal protein L36;protein_id=WP_003859006.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 128131 128391 . - . ID=gene-VMS06_RS10245;Name=VMS06_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10245 NZ_JAVXZI010000007.1 Protein Homology CDS 128131 128391 . - 0 ID=cds-WP_015571255.1;Parent=gene-VMS06_RS10245;Dbxref=GenBank:WP_015571255.1;Name=WP_015571255.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133519.1;locus_tag=VMS06_RS10245;product=type B 50S ribosomal protein L31;protein_id=WP_015571255.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 128605 130164 . + . ID=gene-VMS06_RS10250;Name=VMS06_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10250 NZ_JAVXZI010000007.1 Protein Homology CDS 128605 130164 . + 0 ID=cds-WP_100148825.1;Parent=gene-VMS06_RS10250;Dbxref=GenBank:WP_100148825.1;Name=WP_100148825.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809854.1;locus_tag=VMS06_RS10250;product=EAL domain-containing protein;protein_id=WP_100148825.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 130216 133305 . - . ID=gene-VMS06_RS10255;Name=VMS06_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10255 NZ_JAVXZI010000007.1 Protein Homology CDS 130216 133305 . - 0 ID=cds-WP_063843847.1;Parent=gene-VMS06_RS10255;Dbxref=GenBank:WP_063843847.1;Name=WP_063843847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809857.1;locus_tag=VMS06_RS10255;product=beta-galactosidase;protein_id=WP_063843847.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 133409 134479 . - . ID=gene-VMS06_RS10260;Name=VMS06_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10260 NZ_JAVXZI010000007.1 Protein Homology CDS 133409 134479 . - 0 ID=cds-WP_045307885.1;Parent=gene-VMS06_RS10260;Dbxref=GenBank:WP_045307885.1;Name=WP_045307885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571260.1;locus_tag=VMS06_RS10260;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_045307885.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 134555 135166 . - . ID=gene-VMS06_RS10265;Name=yczE;gbkey=Gene;gene=yczE;gene_biotype=protein_coding;locus_tag=VMS06_RS10265 NZ_JAVXZI010000007.1 Protein Homology CDS 134555 135166 . - 0 ID=cds-WP_022647263.1;Parent=gene-VMS06_RS10265;Dbxref=GenBank:WP_022647263.1;Name=WP_022647263.1;gbkey=CDS;gene=yczE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373562.1;locus_tag=VMS06_RS10265;product=membrane protein YczE;protein_id=WP_022647263.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 135251 136672 . + . ID=gene-VMS06_RS10270;Name=yczR;gbkey=Gene;gene=yczR;gene_biotype=protein_coding;locus_tag=VMS06_RS10270 NZ_JAVXZI010000007.1 Protein Homology CDS 135251 136672 . + 0 ID=cds-WP_022647262.1;Parent=gene-VMS06_RS10270;Dbxref=GenBank:WP_022647262.1;Name=WP_022647262.1;gbkey=CDS;gene=yczR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882792.1;locus_tag=VMS06_RS10270;product=MocR-like transcription factor YczR;protein_id=WP_022647262.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 136743 136958 . - . ID=gene-VMS06_RS10275;Name=VMS06_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10275 NZ_JAVXZI010000007.1 Protein Homology CDS 136743 136958 . - 0 ID=cds-WP_006809861.1;Parent=gene-VMS06_RS10275;Dbxref=GenBank:WP_006809861.1;Name=WP_006809861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225462.1;locus_tag=VMS06_RS10275;product=hypothetical protein;protein_id=WP_006809861.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 136955 137206 . - . ID=gene-VMS06_RS10280;Name=VMS06_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10280 NZ_JAVXZI010000007.1 Protein Homology CDS 136955 137206 . - 0 ID=cds-WP_022647261.1;Parent=gene-VMS06_RS10280;Dbxref=GenBank:WP_022647261.1;Name=WP_022647261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428143.1;locus_tag=VMS06_RS10280;product=hypothetical protein;protein_id=WP_022647261.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 137455 137551 . - . ID=gene-VMS06_RS10285;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=VMS06_RS10285 NZ_JAVXZI010000007.1 cmsearch SRP_RNA 137455 137551 . - . ID=rna-VMS06_RS10285;Parent=gene-VMS06_RS10285;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS10285;product=signal recognition particle sRNA small type NZ_JAVXZI010000007.1 cmsearch exon 137455 137551 . - . ID=exon-VMS06_RS10285-1;Parent=rna-VMS06_RS10285;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS10285;product=signal recognition particle sRNA small type NZ_JAVXZI010000007.1 RefSeq gene 137722 138033 . + . ID=gene-VMS06_RS10290;Name=VMS06_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10290 NZ_JAVXZI010000007.1 Protein Homology CDS 137722 138033 . + 0 ID=cds-WP_022647260.1;Parent=gene-VMS06_RS10290;Dbxref=GenBank:WP_022647260.1;Name=WP_022647260.1;Ontology_term=GO:0006281,GO:0003677,GO:0003824,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099584.1;locus_tag=VMS06_RS10290;product=MGMT family protein;protein_id=WP_022647260.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 138071 138598 . - . ID=gene-VMS06_RS10295;Name=VMS06_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10295 NZ_JAVXZI010000007.1 Protein Homology CDS 138071 138598 . - 0 ID=cds-WP_022647259.1;Parent=gene-VMS06_RS10295;Dbxref=GenBank:WP_022647259.1;Name=WP_022647259.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859018.1;locus_tag=VMS06_RS10295;product=YbaY family lipoprotein;protein_id=WP_022647259.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 138802 139662 . + . ID=gene-VMS06_RS10300;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=VMS06_RS10300 NZ_JAVXZI010000007.1 Protein Homology CDS 138802 139662 . + 0 ID=cds-WP_022647258.1;Parent=gene-VMS06_RS10300;Dbxref=GenBank:WP_022647258.1;Name=WP_022647258.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012125475.1;locus_tag=VMS06_RS10300;product=acyl-CoA thioesterase II;protein_id=WP_022647258.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 139756 141042 . - . ID=gene-VMS06_RS10305;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=VMS06_RS10305 NZ_JAVXZI010000007.1 Protein Homology CDS 139756 141042 . - 0 ID=cds-WP_022647257.1;Parent=gene-VMS06_RS10305;Dbxref=GenBank:WP_022647257.1;Name=WP_022647257.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308532.1;locus_tag=VMS06_RS10305;product=ammonium transporter AmtB;protein_id=WP_022647257.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 141078 141416 . - . ID=gene-VMS06_RS10310;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=VMS06_RS10310 NZ_JAVXZI010000007.1 Protein Homology CDS 141078 141416 . - 0 ID=cds-WP_006809867.1;Parent=gene-VMS06_RS10310;Dbxref=GenBank:WP_006809867.1;Name=WP_006809867.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225455.1;locus_tag=VMS06_RS10310;product=P-II family nitrogen regulator;protein_id=WP_006809867.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 141628 143409 . - . ID=gene-VMS06_RS10315;Name=VMS06_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10315 NZ_JAVXZI010000007.1 Protein Homology CDS 141628 143409 . - 0 ID=cds-WP_022647256.1;Parent=gene-VMS06_RS10315;Dbxref=GenBank:WP_022647256.1;Name=WP_022647256.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308530.1;locus_tag=VMS06_RS10315;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_022647256.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 143402 145156 . - . ID=gene-VMS06_RS10320;Name=VMS06_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10320 NZ_JAVXZI010000007.1 Protein Homology CDS 143402 145156 . - 0 ID=cds-WP_063147919.1;Parent=gene-VMS06_RS10320;Dbxref=GenBank:WP_063147919.1;Name=WP_063147919.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308529.1;locus_tag=VMS06_RS10320;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_063147919.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 145187 145645 . - . ID=gene-VMS06_RS10325;Name=VMS06_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10325 NZ_JAVXZI010000007.1 Protein Homology CDS 145187 145645 . - 0 ID=cds-WP_022647254.1;Parent=gene-VMS06_RS10325;Dbxref=GenBank:WP_022647254.1;Name=WP_022647254.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459455.1;locus_tag=VMS06_RS10325;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_022647254.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 145761 146807 . + . ID=gene-VMS06_RS10330;Name=VMS06_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10330 NZ_JAVXZI010000007.1 Protein Homology CDS 145761 146807 . + 0 ID=cds-WP_063843846.1;Parent=gene-VMS06_RS10330;Dbxref=GenBank:WP_063843846.1;Name=WP_063843846.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859036.1;locus_tag=VMS06_RS10330;product=PLP-dependent cysteine synthase family protein;protein_id=WP_063843846.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 146848 147666 . - . ID=gene-VMS06_RS10335;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=VMS06_RS10335 NZ_JAVXZI010000007.1 Protein Homology CDS 146848 147666 . - 0 ID=cds-WP_023299454.1;Parent=gene-VMS06_RS10335;Dbxref=GenBank:WP_023299454.1;Name=WP_023299454.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459453.1;locus_tag=VMS06_RS10335;product=HMP-PP phosphatase;protein_id=WP_023299454.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 147768 149468 . + . ID=gene-VMS06_RS10340;Name=VMS06_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10340 NZ_JAVXZI010000007.1 Protein Homology CDS 147768 149468 . + 0 ID=cds-WP_063147917.1;Parent=gene-VMS06_RS10340;Dbxref=GenBank:WP_063147917.1;Name=WP_063147917.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383194.1;locus_tag=VMS06_RS10340;product=SgrR family transcriptional regulator;protein_id=WP_063147917.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 149535 150230 . + . ID=gene-VMS06_RS10345;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=VMS06_RS10345 NZ_JAVXZI010000007.1 Protein Homology CDS 149535 150230 . + 0 ID=cds-WP_022647250.1;Parent=gene-VMS06_RS10345;Dbxref=GenBank:WP_022647250.1;Name=WP_022647250.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308525.1;locus_tag=VMS06_RS10345;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_022647250.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 150293 150691 . - . ID=gene-VMS06_RS10350;Name=VMS06_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10350 NZ_JAVXZI010000007.1 Protein Homology CDS 150293 150691 . - 0 ID=cds-WP_017694410.1;Parent=gene-VMS06_RS10350;Dbxref=GenBank:WP_017694410.1;Name=WP_017694410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694410.1;locus_tag=VMS06_RS10350;product=YbgC/FadM family acyl-CoA thioesterase;protein_id=WP_017694410.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 150789 151169 . - . ID=gene-VMS06_RS10355;Name=VMS06_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10355 NZ_JAVXZI010000007.1 Protein Homology CDS 150789 151169 . - 0 ID=cds-WP_038415510.1;Parent=gene-VMS06_RS10355;Dbxref=GenBank:WP_038415510.1;Name=WP_038415510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125169.1;locus_tag=VMS06_RS10355;product=helix-hairpin-helix domain-containing protein;protein_id=WP_038415510.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 151318 153189 . - . ID=gene-VMS06_RS10360;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=VMS06_RS10360 NZ_JAVXZI010000007.1 Protein Homology CDS 151318 153189 . - 0 ID=cds-WP_323630657.1;Parent=gene-VMS06_RS10360;Dbxref=GenBank:WP_323630657.1;Name=WP_323630657.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008320735.1;locus_tag=VMS06_RS10360;product=peptidylprolyl isomerase;protein_id=WP_323630657.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 153402 153674 . - . ID=gene-VMS06_RS10365;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=VMS06_RS10365 NZ_JAVXZI010000007.1 Protein Homology CDS 153402 153674 . - 0 ID=cds-WP_002444653.1;Parent=gene-VMS06_RS10365;Dbxref=GenBank:WP_002444653.1;Name=WP_002444653.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=VMS06_RS10365;product=nucleoid-associated protein HU-beta;protein_id=WP_002444653.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 153885 156239 . - . ID=gene-VMS06_RS10370;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=VMS06_RS10370 NZ_JAVXZI010000007.1 Protein Homology CDS 153885 156239 . - 0 ID=cds-WP_006809878.1;Parent=gene-VMS06_RS10370;Dbxref=GenBank:WP_006809878.1;Name=WP_006809878.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=VMS06_RS10370;product=endopeptidase La;protein_id=WP_006809878.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 156424 157698 . - . ID=gene-VMS06_RS10375;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=VMS06_RS10375 NZ_JAVXZI010000007.1 Protein Homology CDS 156424 157698 . - 0 ID=cds-WP_006809879.1;Parent=gene-VMS06_RS10375;Dbxref=GenBank:WP_006809879.1;Name=WP_006809879.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=VMS06_RS10375;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_006809879.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 157826 158449 . - . ID=gene-VMS06_RS10380;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=VMS06_RS10380 NZ_JAVXZI010000007.1 Protein Homology CDS 157826 158449 . - 0 ID=cds-WP_006809880.1;Parent=gene-VMS06_RS10380;Dbxref=GenBank:WP_006809880.1;Name=WP_006809880.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=VMS06_RS10380;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_006809880.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 158710 160008 . - . ID=gene-VMS06_RS10385;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=VMS06_RS10385 NZ_JAVXZI010000007.1 Protein Homology CDS 158710 160008 . - 0 ID=cds-WP_063147916.1;Parent=gene-VMS06_RS10385;Dbxref=GenBank:WP_063147916.1;Name=WP_063147916.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=VMS06_RS10385;product=trigger factor;protein_id=WP_063147916.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 160340 160657 . - . ID=gene-VMS06_RS10390;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=VMS06_RS10390 NZ_JAVXZI010000007.1 Protein Homology CDS 160340 160657 . - 0 ID=cds-WP_003859051.1;Parent=gene-VMS06_RS10390;Dbxref=GenBank:WP_003859051.1;Name=WP_003859051.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414969.4;locus_tag=VMS06_RS10390;product=transcriptional regulator BolA;protein_id=WP_003859051.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 160961 161539 . + . ID=gene-VMS06_RS10395;Name=VMS06_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10395 NZ_JAVXZI010000007.1 Protein Homology CDS 160961 161539 . + 0 ID=cds-WP_022647246.1;Parent=gene-VMS06_RS10395;Dbxref=GenBank:WP_022647246.1;Name=WP_022647246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=VMS06_RS10395;product=lipoprotein;protein_id=WP_022647246.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 161585 163060 . + . ID=gene-VMS06_RS10400;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=VMS06_RS10400 NZ_JAVXZI010000007.1 Protein Homology CDS 161585 163060 . + 0 ID=cds-WP_063147915.1;Parent=gene-VMS06_RS10400;Dbxref=GenBank:WP_063147915.1;Name=WP_063147915.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225435.1;locus_tag=VMS06_RS10400;product=muropeptide MFS transporter AmpG;protein_id=WP_063147915.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 163539 164486 . + . ID=gene-VMS06_RS10405;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=VMS06_RS10405 NZ_JAVXZI010000007.1 Protein Homology CDS 163539 164486 . + 0 ID=cds-WP_006809886.1;Parent=gene-VMS06_RS10405;Dbxref=GenBank:WP_006809886.1;Name=WP_006809886.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=VMS06_RS10405;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_006809886.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 164503 166494 . + . ID=gene-VMS06_RS10410;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=VMS06_RS10410 NZ_JAVXZI010000007.1 Protein Homology CDS 164503 166494 . + 0 ID=cds-WP_006809887.1;Parent=gene-VMS06_RS10410;Dbxref=GenBank:WP_006809887.1;Name=WP_006809887.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=VMS06_RS10410;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_006809887.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 166484 167098 . + . ID=gene-VMS06_RS10415;Name=VMS06_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10415 NZ_JAVXZI010000007.1 Protein Homology CDS 166484 167098 . + 0 ID=cds-WP_022647243.1;Parent=gene-VMS06_RS10415;Dbxref=GenBank:WP_022647243.1;Name=WP_022647243.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=VMS06_RS10415;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_022647243.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 167098 167424 . + . ID=gene-VMS06_RS10420;Name=VMS06_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10420 NZ_JAVXZI010000007.1 Protein Homology CDS 167098 167424 . + 0 ID=cds-WP_006809888.1;Parent=gene-VMS06_RS10420;Dbxref=GenBank:WP_006809888.1;Name=WP_006809888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308510.1;locus_tag=VMS06_RS10420;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_006809888.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 167436 168323 . + . ID=gene-VMS06_RS10425;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=VMS06_RS10425 NZ_JAVXZI010000007.1 Protein Homology CDS 167436 168323 . + 0 ID=cds-WP_022647242.1;Parent=gene-VMS06_RS10425;Dbxref=GenBank:WP_022647242.1;Name=WP_022647242.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007705361.1;locus_tag=VMS06_RS10425;product=heme o synthase;protein_id=WP_022647242.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 168364 168792 . - . ID=gene-VMS06_RS10430;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=VMS06_RS10430 NZ_JAVXZI010000007.1 Protein Homology CDS 168364 168792 . - 0 ID=cds-WP_063147914.1;Parent=gene-VMS06_RS10430;Dbxref=GenBank:WP_063147914.1;Name=WP_063147914.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383187.1;locus_tag=VMS06_RS10430;product=L-fucose mutarotase;protein_id=WP_063147914.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 168785 170188 . - . ID=gene-VMS06_RS10435;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=VMS06_RS10435 NZ_JAVXZI010000007.1 Protein Homology CDS 168785 170188 . - 0 ID=cds-WP_063147913.1;Parent=gene-VMS06_RS10435;Dbxref=GenBank:WP_063147913.1;Name=WP_063147913.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176896.1;locus_tag=VMS06_RS10435;product=L-fuculokinase;protein_id=WP_063147913.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 170238 172016 . - . ID=gene-VMS06_RS10440;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=VMS06_RS10440 NZ_JAVXZI010000007.1 Protein Homology CDS 170238 172016 . - 0 ID=cds-WP_022647239.1;Parent=gene-VMS06_RS10440;Dbxref=GenBank:WP_022647239.1;Name=WP_022647239.1;Ontology_term=GO:0019317,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=fucose catabolic process|0019317||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228534.1;locus_tag=VMS06_RS10440;product=L-fucose isomerase;protein_id=WP_022647239.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 172424 173923 . + . ID=gene-VMS06_RS10445;Name=VMS06_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10445 NZ_JAVXZI010000007.1 Protein Homology CDS 172424 173923 . + 0 ID=cds-WP_022647238.1;Parent=gene-VMS06_RS10445;Dbxref=GenBank:WP_022647238.1;Name=WP_022647238.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020218798.1;locus_tag=VMS06_RS10445;product=sugar ABC transporter ATP-binding protein;protein_id=WP_022647238.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 173926 174909 . + . ID=gene-VMS06_RS10450;Name=VMS06_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10450 NZ_JAVXZI010000007.1 Protein Homology CDS 173926 174909 . + 0 ID=cds-WP_022647237.1;Parent=gene-VMS06_RS10450;Dbxref=GenBank:WP_022647237.1;Name=WP_022647237.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000156205.1;locus_tag=VMS06_RS10450;product=ABC transporter permease;protein_id=WP_022647237.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 174956 175906 . + . ID=gene-VMS06_RS10455;Name=VMS06_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10455 NZ_JAVXZI010000007.1 Protein Homology CDS 174956 175906 . + 0 ID=cds-WP_000858088.1;Parent=gene-VMS06_RS10455;Dbxref=GenBank:WP_000858088.1;Name=WP_000858088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857361.1;locus_tag=VMS06_RS10455;product=ABC transporter substrate-binding protein;protein_id=WP_000858088.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 175918 177507 . + . ID=gene-VMS06_RS10460;Name=VMS06_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10460 NZ_JAVXZI010000007.1 Protein Homology CDS 175918 177507 . + 0 ID=cds-WP_032624754.1;Parent=gene-VMS06_RS10460;Dbxref=GenBank:WP_032624754.1;Name=WP_032624754.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383182.1;locus_tag=VMS06_RS10460;product=FGGY-family carbohydrate kinase;protein_id=WP_032624754.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 177568 178563 . + . ID=gene-VMS06_RS10465;Name=VMS06_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10465 NZ_JAVXZI010000007.1 Protein Homology CDS 177568 178563 . + 0 ID=cds-WP_023299444.1;Parent=gene-VMS06_RS10465;Dbxref=GenBank:WP_023299444.1;Name=WP_023299444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571284.1;locus_tag=VMS06_RS10465;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_023299444.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 178591 179238 . + . ID=gene-VMS06_RS10470;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=VMS06_RS10470 NZ_JAVXZI010000007.1 Protein Homology CDS 178591 179238 . + 0 ID=cds-WP_017383181.1;Parent=gene-VMS06_RS10470;Dbxref=GenBank:WP_017383181.1;Name=WP_017383181.1;Ontology_term=GO:0006004,GO:0008270,GO:0008738;gbkey=CDS;gene=fucA;go_function=zinc ion binding|0008270||IEA,L-fuculose-phosphate aldolase activity|0008738||IEA;go_process=fucose metabolic process|0006004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176888.1;locus_tag=VMS06_RS10470;product=L-fuculose-phosphate aldolase;protein_id=WP_017383181.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 179353 180714 . + . ID=gene-VMS06_RS10475;Name=VMS06_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10475 NZ_JAVXZI010000007.1 Protein Homology CDS 179353 180714 . + 0 ID=cds-WP_022647234.1;Parent=gene-VMS06_RS10475;Dbxref=GenBank:WP_022647234.1;Name=WP_022647234.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503326.1;locus_tag=VMS06_RS10475;product=MFS transporter;protein_id=WP_022647234.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 180747 181238 . - . ID=gene-VMS06_RS10480;Name=VMS06_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10480 NZ_JAVXZI010000007.1 Protein Homology CDS 180747 181238 . - 0 ID=cds-WP_022647233.1;Parent=gene-VMS06_RS10480;Dbxref=GenBank:WP_022647233.1;Name=WP_022647233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965590.1;locus_tag=VMS06_RS10480;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_022647233.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 181364 182275 . + . ID=gene-VMS06_RS10485;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=VMS06_RS10485 NZ_JAVXZI010000007.1 Protein Homology CDS 181364 182275 . + 0 ID=cds-WP_046620560.1;Parent=gene-VMS06_RS10485;Dbxref=GenBank:WP_046620560.1;Name=WP_046620560.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414959.1;locus_tag=VMS06_RS10485;product=2-dehydropantoate 2-reductase;protein_id=WP_046620560.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 182238 182828 . + . ID=gene-VMS06_RS10490;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=VMS06_RS10490 NZ_JAVXZI010000007.1 Protein Homology CDS 182238 182828 . + 0 ID=cds-WP_022647231.1;Parent=gene-VMS06_RS10490;Dbxref=GenBank:WP_022647231.1;Name=WP_022647231.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414958.4;locus_tag=VMS06_RS10490;product=protein deglycase YajL;protein_id=WP_022647231.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 182916 184364 . - . ID=gene-VMS06_RS10495;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=VMS06_RS10495 NZ_JAVXZI010000007.1 Protein Homology CDS 182916 184364 . - 0 ID=cds-WP_022647230.1;Parent=gene-VMS06_RS10495;Dbxref=GenBank:WP_022647230.1;Name=WP_022647230.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=VMS06_RS10495;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_022647230.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 184550 184792 . + . ID=gene-VMS06_RS10500;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=VMS06_RS10500 NZ_JAVXZI010000007.1 Protein Homology CDS 184550 184792 . + 0 ID=cds-WP_003859094.1;Parent=gene-VMS06_RS10500;Dbxref=GenBank:WP_003859094.1;Name=WP_003859094.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308503.1;locus_tag=VMS06_RS10500;product=exodeoxyribonuclease VII small subunit;protein_id=WP_003859094.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 184793 185692 . + . ID=gene-VMS06_RS10505;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=VMS06_RS10505 NZ_JAVXZI010000007.1 Protein Homology CDS 184793 185692 . + 0 ID=cds-WP_022647229.1;Parent=gene-VMS06_RS10505;Dbxref=GenBank:WP_022647229.1;Name=WP_022647229.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225413.1;locus_tag=VMS06_RS10505;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_022647229.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 185717 187579 . + . ID=gene-VMS06_RS10510;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=VMS06_RS10510 NZ_JAVXZI010000007.1 Protein Homology CDS 185717 187579 . + 0 ID=cds-WP_022647228.1;Parent=gene-VMS06_RS10510;Dbxref=GenBank:WP_022647228.1;Name=WP_022647228.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414954.1;locus_tag=VMS06_RS10510;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_022647228.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 187642 188616 . + . ID=gene-VMS06_RS10515;Name=VMS06_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10515 NZ_JAVXZI010000007.1 Protein Homology CDS 187642 188616 . + 0 ID=cds-WP_022647227.1;Parent=gene-VMS06_RS10515;Dbxref=GenBank:WP_022647227.1;Name=WP_022647227.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459416.1;locus_tag=VMS06_RS10515;product=aldo/keto reductase;protein_id=WP_022647227.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 188686 189657 . - . ID=gene-VMS06_RS10520;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=VMS06_RS10520 NZ_JAVXZI010000007.1 Protein Homology CDS 188686 189657 . - 0 ID=cds-WP_022647226.1;Parent=gene-VMS06_RS10520;Dbxref=GenBank:WP_022647226.1;Name=WP_022647226.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885221.1;locus_tag=VMS06_RS10520;product=thiamine-phosphate kinase;protein_id=WP_022647226.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 189735 190154 . - . ID=gene-VMS06_RS10525;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=VMS06_RS10525 NZ_JAVXZI010000007.1 Protein Homology CDS 189735 190154 . - 0 ID=cds-WP_006809908.1;Parent=gene-VMS06_RS10525;Dbxref=GenBank:WP_006809908.1;Name=WP_006809908.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459413.1;locus_tag=VMS06_RS10525;product=transcription antitermination factor NusB;protein_id=WP_006809908.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 190176 190646 . - . ID=gene-VMS06_RS10530;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=VMS06_RS10530 NZ_JAVXZI010000007.1 Protein Homology CDS 190176 190646 . - 0 ID=cds-WP_003859098.1;Parent=gene-VMS06_RS10530;Dbxref=GenBank:WP_003859098.1;Name=WP_003859098.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=VMS06_RS10530;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_003859098.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 190734 191837 . - . ID=gene-VMS06_RS10535;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=VMS06_RS10535 NZ_JAVXZI010000007.1 Protein Homology CDS 190734 191837 . - 0 ID=cds-WP_022647225.1;Parent=gene-VMS06_RS10535;Dbxref=GenBank:WP_022647225.1;Name=WP_022647225.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308494.1;locus_tag=VMS06_RS10535;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_022647225.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 191842 192291 . - . ID=gene-VMS06_RS10540;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=VMS06_RS10540 NZ_JAVXZI010000007.1 Protein Homology CDS 191842 192291 . - 0 ID=cds-WP_003859099.1;Parent=gene-VMS06_RS10540;Dbxref=GenBank:WP_003859099.1;Name=WP_003859099.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=VMS06_RS10540;product=transcriptional regulator NrdR;protein_id=WP_003859099.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 192444 192983 . + . ID=gene-VMS06_RS10545;Name=VMS06_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10545 NZ_JAVXZI010000007.1 Protein Homology CDS 192444 192983 . + 0 ID=cds-WP_080460819.1;Parent=gene-VMS06_RS10545;Dbxref=GenBank:WP_080460819.1;Name=WP_080460819.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882756.1;locus_tag=VMS06_RS10545;product=SadB/YajI family lipoprotein;protein_id=WP_080460819.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 193252 194136 . + . ID=gene-VMS06_RS10550;Name=VMS06_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10550 NZ_JAVXZI010000007.1 Protein Homology CDS 193252 194136 . + 0 ID=cds-WP_032621817.1;Parent=gene-VMS06_RS10550;Dbxref=GenBank:WP_032621817.1;Name=WP_032621817.1;Ontology_term=GO:0015858,GO:0015471,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside-specific channel forming porin activity|0015471||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225403.1;locus_tag=VMS06_RS10550;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_032621817.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq pseudogene 194225 194335 . - . ID=gene-VMS06_RS10555;Name=VMS06_RS10555;end_range=194335,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS10555;partial=true;pseudo=true NZ_JAVXZI010000007.1 Protein Homology CDS 194225 194335 . - 0 ID=cds-VMS06_RS10555;Parent=gene-VMS06_RS10555;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=194335,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428064.1;locus_tag=VMS06_RS10555;partial=true;product=DNA-binding transcriptional regulator;pseudo=true;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 194406 195377 . - . ID=gene-VMS06_RS10560;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=VMS06_RS10560 NZ_JAVXZI010000007.1 Protein Homology CDS 194406 195377 . - 0 ID=cds-WP_003859105.1;Parent=gene-VMS06_RS10560;Dbxref=GenBank:WP_003859105.1;Name=WP_003859105.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225400.1;locus_tag=VMS06_RS10560;product=protein translocase subunit SecF;protein_id=WP_003859105.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 195388 197235 . - . ID=gene-VMS06_RS10565;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=VMS06_RS10565 NZ_JAVXZI010000007.1 Protein Homology CDS 195388 197235 . - 0 ID=cds-WP_032621613.1;Parent=gene-VMS06_RS10565;Dbxref=GenBank:WP_032621613.1;Name=WP_032621613.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=VMS06_RS10565;product=protein translocase subunit SecD;protein_id=WP_032621613.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 197263 197595 . - . ID=gene-VMS06_RS10570;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=VMS06_RS10570 NZ_JAVXZI010000007.1 Protein Homology CDS 197263 197595 . - 0 ID=cds-WP_003859109.1;Parent=gene-VMS06_RS10570;Dbxref=GenBank:WP_003859109.1;Name=WP_003859109.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=VMS06_RS10570;product=preprotein translocase subunit YajC;protein_id=WP_003859109.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 197618 198745 . - . ID=gene-VMS06_RS10575;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=VMS06_RS10575 NZ_JAVXZI010000007.1 Protein Homology CDS 197618 198745 . - 0 ID=cds-WP_003859110.1;Parent=gene-VMS06_RS10575;Dbxref=GenBank:WP_003859110.1;Name=WP_003859110.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=VMS06_RS10575;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_003859110.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 198799 199869 . - . ID=gene-VMS06_RS10580;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=VMS06_RS10580 NZ_JAVXZI010000007.1 Protein Homology CDS 198799 199869 . - 0 ID=cds-WP_063147910.1;Parent=gene-VMS06_RS10580;Dbxref=GenBank:WP_063147910.1;Name=WP_063147910.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308483.1;locus_tag=VMS06_RS10580;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_063147910.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 199962 200543 . + . ID=gene-VMS06_RS10585;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=VMS06_RS10585 NZ_JAVXZI010000007.1 Protein Homology CDS 199962 200543 . + 0 ID=cds-WP_022647220.1;Parent=gene-VMS06_RS10585;Dbxref=GenBank:WP_022647220.1;Name=WP_022647220.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414938.1;locus_tag=VMS06_RS10585;product=ACP phosphodiesterase;protein_id=WP_022647220.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 200671 201273 . + . ID=gene-VMS06_RS10590;Name=VMS06_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10590 NZ_JAVXZI010000007.1 Protein Homology CDS 200671 201273 . + 0 ID=cds-WP_003859113.1;Parent=gene-VMS06_RS10590;Dbxref=GenBank:WP_003859113.1;Name=WP_003859113.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225393.1;locus_tag=VMS06_RS10590;product=peroxiredoxin C;protein_id=WP_003859113.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 201322 202701 . - . ID=gene-VMS06_RS10595;Name=VMS06_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10595 NZ_JAVXZI010000007.1 Protein Homology CDS 201322 202701 . - 0 ID=cds-WP_063147909.1;Parent=gene-VMS06_RS10595;Dbxref=GenBank:WP_063147909.1;Name=WP_063147909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383163.1;locus_tag=VMS06_RS10595;product=DUF3999 domain-containing protein;protein_id=WP_063147909.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 202698 205307 . - . ID=gene-VMS06_RS10600;Name=VMS06_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10600 NZ_JAVXZI010000007.1 Protein Homology CDS 202698 205307 . - 0 ID=cds-WP_063147908.1;Parent=gene-VMS06_RS10600;Dbxref=GenBank:WP_063147908.1;Name=WP_063147908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809919.1;locus_tag=VMS06_RS10600;product=DUF2339 domain-containing protein;protein_id=WP_063147908.1;transl_table=11 NZ_JAVXZI010000007.1 RefSeq gene 205398 207215 . - . ID=gene-VMS06_RS10605;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=VMS06_RS10605 NZ_JAVXZI010000007.1 Protein Homology CDS 205398 207215 . - 0 ID=cds-WP_063147907.1;Parent=gene-VMS06_RS10605;Dbxref=GenBank:WP_063147907.1;Name=WP_063147907.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885232.1;locus_tag=VMS06_RS10605;product=maltodextrin glucosidase;protein_id=WP_063147907.1;transl_table=11 ##sequence-region NZ_JAVXZI010000008.1 1 194855 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000008.1 RefSeq region 1 194855 . + . ID=NZ_JAVXZI010000008.1:1..194855;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000008.1 RefSeq gene 1 105 . - . ID=gene-VMS06_RS10610;Name=VMS06_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10610;partial=true;start_range=.,1 NZ_JAVXZI010000008.1 Protein Homology CDS 1 105 . - 0 ID=cds-WP_168929095.1;Parent=gene-VMS06_RS10610;Dbxref=GenBank:WP_168929095.1;Name=WP_168929095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=VMS06_RS10610;partial=true;product=4Fe-4S binding protein;protein_id=WP_168929095.1;start_range=.,1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 116 2554 . - . ID=gene-VMS06_RS10615;Name=ynfE;gbkey=Gene;gene=ynfE;gene_biotype=protein_coding;locus_tag=VMS06_RS10615 NZ_JAVXZI010000008.1 Protein Homology CDS 116 2554 . - 0 ID=cds-WP_323630658.1;Parent=gene-VMS06_RS10615;Dbxref=GenBank:WP_323630658.1;Name=WP_323630658.1;gbkey=CDS;gene=ynfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570618.1;locus_tag=VMS06_RS10615;product=selenate/tellurate reductase subunit YnfE;protein_id=WP_323630658.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 2685 2990 . - . ID=gene-VMS06_RS10620;Name=VMS06_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10620 NZ_JAVXZI010000008.1 Protein Homology CDS 2685 2990 . - 0 ID=cds-WP_063147377.1;Parent=gene-VMS06_RS10620;Dbxref=GenBank:WP_063147377.1;Name=WP_063147377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831729.1;locus_tag=VMS06_RS10620;product=DUF1161 domain-containing protein;protein_id=WP_063147377.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 3093 3947 . - . ID=gene-VMS06_RS10625;Name=VMS06_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10625 NZ_JAVXZI010000008.1 Protein Homology CDS 3093 3947 . - 0 ID=cds-WP_023306114.1;Parent=gene-VMS06_RS10625;Dbxref=GenBank:WP_023306114.1;Name=WP_023306114.1;Ontology_term=GO:0006487,GO:0003830;gbkey=CDS;go_function=beta-1%2C4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity|0003830||IEA;go_process=protein N-linked glycosylation|0006487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857421.1;locus_tag=VMS06_RS10625;product=glycosyltransferase family 17 protein;protein_id=WP_023306114.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq pseudogene 4140 4849 . + . ID=gene-VMS06_RS10630;Name=VMS06_RS10630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS10630;pseudo=true NZ_JAVXZI010000008.1 Protein Homology CDS 4140 4849 . + 0 ID=cds-VMS06_RS10630;Parent=gene-VMS06_RS10630;Note=frameshifted;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384542.1;locus_tag=VMS06_RS10630;product=YnfC family lipoprotein;pseudo=true;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 4867 5427 . - . ID=gene-VMS06_RS10635;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=VMS06_RS10635 NZ_JAVXZI010000008.1 Protein Homology CDS 4867 5427 . - 0 ID=cds-WP_023300006.1;Parent=gene-VMS06_RS10635;Dbxref=GenBank:WP_023300006.1;Name=WP_023300006.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004387243.1;locus_tag=VMS06_RS10635;product=spermidine N1-acetyltransferase;protein_id=WP_023300006.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 5427 5765 . - . ID=gene-VMS06_RS10640;Name=VMS06_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10640 NZ_JAVXZI010000008.1 Protein Homology CDS 5427 5765 . - 0 ID=cds-WP_023300007.1;Parent=gene-VMS06_RS10640;Dbxref=GenBank:WP_023300007.1;Name=WP_023300007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857414.1;locus_tag=VMS06_RS10640;product=DUF1283 family protein;protein_id=WP_023300007.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 5916 6242 . + . ID=gene-VMS06_RS10645;Name=VMS06_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10645 NZ_JAVXZI010000008.1 Protein Homology CDS 5916 6242 . + 0 ID=cds-WP_063147375.1;Parent=gene-VMS06_RS10645;Dbxref=GenBank:WP_063147375.1;Name=WP_063147375.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477371.1;locus_tag=VMS06_RS10645;product=YnfA family protein;protein_id=WP_063147375.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 6354 7568 . + . ID=gene-VMS06_RS10650;Name=manD;gbkey=Gene;gene=manD;gene_biotype=protein_coding;locus_tag=VMS06_RS10650 NZ_JAVXZI010000008.1 Protein Homology CDS 6354 7568 . + 0 ID=cds-WP_023300009.1;Parent=gene-VMS06_RS10650;Dbxref=GenBank:WP_023300009.1;Name=WP_023300009.1;Ontology_term=GO:0016052,GO:0008927;gbkey=CDS;gene=manD;go_function=mannonate dehydratase activity|0008927||IEA;go_process=carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001625315.1;locus_tag=VMS06_RS10650;product=D-mannonate dehydratase ManD;protein_id=WP_023300009.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 7583 8602 . + . ID=gene-VMS06_RS10655;Name=VMS06_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10655 NZ_JAVXZI010000008.1 Protein Homology CDS 7583 8602 . + 0 ID=cds-WP_063147374.1;Parent=gene-VMS06_RS10655;Dbxref=GenBank:WP_063147374.1;Name=WP_063147374.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694077.1;locus_tag=VMS06_RS10655;product=Zn-dependent oxidoreductase;protein_id=WP_063147374.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 8676 10055 . + . ID=gene-VMS06_RS10660;Name=VMS06_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10660 NZ_JAVXZI010000008.1 Protein Homology CDS 8676 10055 . + 0 ID=cds-WP_063147373.1;Parent=gene-VMS06_RS10660;Dbxref=GenBank:WP_063147373.1;Name=WP_063147373.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808853.1;locus_tag=VMS06_RS10660;product=MFS transporter;protein_id=WP_063147373.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 10279 11742 . + . ID=gene-VMS06_RS10665;Name=VMS06_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10665 NZ_JAVXZI010000008.1 Protein Homology CDS 10279 11742 . + 0 ID=cds-WP_063147372.1;Parent=gene-VMS06_RS10665;Dbxref=GenBank:WP_063147372.1;Name=WP_063147372.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570612.1;locus_tag=VMS06_RS10665;product=mannitol dehydrogenase family protein;protein_id=WP_063147372.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 11787 11990 . - . ID=gene-VMS06_RS10670;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=VMS06_RS10670 NZ_JAVXZI010000008.1 Protein Homology CDS 11787 11990 . - 0 ID=cds-WP_003857405.1;Parent=gene-VMS06_RS10670;Dbxref=GenBank:WP_003857405.1;Name=WP_003857405.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460469.1;locus_tag=VMS06_RS10670;product=putative selenium delivery protein YdfZ;protein_id=WP_003857405.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 12278 12709 . + . ID=gene-VMS06_RS10675;Name=VMS06_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10675 NZ_JAVXZI010000008.1 Protein Homology CDS 12278 12709 . + 0 ID=cds-WP_023300013.1;Parent=gene-VMS06_RS10675;Dbxref=GenBank:WP_023300013.1;Name=WP_023300013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900334.1;locus_tag=VMS06_RS10675;product=universal stress protein;protein_id=WP_023300013.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 12745 13431 . - . ID=gene-VMS06_RS10680;Name=VMS06_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10680 NZ_JAVXZI010000008.1 Protein Homology CDS 12745 13431 . - 0 ID=cds-WP_003857403.1;Parent=gene-VMS06_RS10680;Dbxref=GenBank:WP_003857403.1;Name=WP_003857403.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226801.1;locus_tag=VMS06_RS10680;product=GntR family transcriptional regulator;protein_id=WP_003857403.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 13522 14268 . - . ID=gene-VMS06_RS10685;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=VMS06_RS10685 NZ_JAVXZI010000008.1 Protein Homology CDS 13522 14268 . - 0 ID=cds-WP_022647991.1;Parent=gene-VMS06_RS10685;Dbxref=GenBank:WP_022647991.1;Name=WP_022647991.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883682.1;locus_tag=VMS06_RS10685;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_022647991.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 14412 16445 . + . ID=gene-VMS06_RS10690;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=VMS06_RS10690 NZ_JAVXZI010000008.1 Protein Homology CDS 14412 16445 . + 0 ID=cds-WP_063147371.1;Parent=gene-VMS06_RS10690;Dbxref=GenBank:WP_063147371.1;Name=WP_063147371.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857400.1;locus_tag=VMS06_RS10690;product=peptidyl-dipeptidase Dcp;protein_id=WP_063147371.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 16743 16850 . - . ID=gene-VMS06_RS10695;Name=VMS06_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10695 NZ_JAVXZI010000008.1 Protein Homology CDS 16743 16850 . - 0 ID=cds-WP_022647993.1;Parent=gene-VMS06_RS10695;Dbxref=GenBank:WP_022647993.1;Name=WP_022647993.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041477.1;locus_tag=VMS06_RS10695;product=YnaM/YnfT family protein;protein_id=WP_022647993.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 17061 17288 . - . ID=gene-VMS06_RS10700;Name=VMS06_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10700 NZ_JAVXZI010000008.1 Protein Homology CDS 17061 17288 . - 0 ID=cds-WP_072049850.1;Parent=gene-VMS06_RS10700;Dbxref=GenBank:WP_072049850.1;Name=WP_072049850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434226.1;locus_tag=VMS06_RS10700;product=hypothetical protein;protein_id=WP_072049850.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 17438 17602 . + . ID=gene-VMS06_RS10705;Name=VMS06_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10705 NZ_JAVXZI010000008.1 Protein Homology CDS 17438 17602 . + 0 ID=cds-WP_213083702.1;Parent=gene-VMS06_RS10705;Dbxref=GenBank:WP_213083702.1;Name=WP_213083702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038384.1;locus_tag=VMS06_RS10705;product=YnfU family zinc-binding protein;protein_id=WP_213083702.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 17851 18069 . - . ID=gene-VMS06_RS10710;Name=VMS06_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10710 NZ_JAVXZI010000008.1 Protein Homology CDS 17851 18069 . - 0 ID=cds-WP_022647994.1;Parent=gene-VMS06_RS10710;Dbxref=GenBank:WP_022647994.1;Name=WP_022647994.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000203924.1;locus_tag=VMS06_RS10710;product=cold shock domain-containing protein;protein_id=WP_022647994.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 18437 19126 . - . ID=gene-VMS06_RS10715;Name=VMS06_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10715 NZ_JAVXZI010000008.1 Protein Homology CDS 18437 19126 . - 0 ID=cds-WP_038415993.1;Parent=gene-VMS06_RS10715;Dbxref=GenBank:WP_038415993.1;Name=WP_038415993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366264.1;locus_tag=VMS06_RS10715;product=SOS response-associated peptidase;protein_id=WP_038415993.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 19390 19629 . - . ID=gene-VMS06_RS10720;Name=VMS06_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10720 NZ_JAVXZI010000008.1 Protein Homology CDS 19390 19629 . - 0 ID=cds-WP_006808847.1;Parent=gene-VMS06_RS10720;Dbxref=GenBank:WP_006808847.1;Name=WP_006808847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000497460.1;locus_tag=VMS06_RS10720;product=DinI family protein;protein_id=WP_006808847.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 19956 20375 . + . ID=gene-VMS06_RS10725;Name=VMS06_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10725 NZ_JAVXZI010000008.1 Protein Homology CDS 19956 20375 . + 0 ID=cds-WP_022647996.1;Parent=gene-VMS06_RS10725;Dbxref=GenBank:WP_022647996.1;Name=WP_022647996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460949.1;locus_tag=VMS06_RS10725;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_022647996.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 20377 21645 . + . ID=gene-VMS06_RS10730;Name=VMS06_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10730 NZ_JAVXZI010000008.1 Protein Homology CDS 20377 21645 . + 0 ID=cds-WP_032622206.1;Parent=gene-VMS06_RS10730;Dbxref=GenBank:WP_032622206.1;Name=WP_032622206.1;Ontology_term=GO:0006974,GO:0009432,GO:0019985,GO:0042276,GO:0003684,GO:0003887;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA damage response|0006974||IEA,SOS response|0009432||IEA,translesion synthesis|0019985||IEA,error-prone translesion synthesis|0042276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102415.1;locus_tag=VMS06_RS10730;product=Y-family DNA polymerase;protein_id=WP_032622206.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq pseudogene 21725 21829 . - . ID=gene-VMS06_RS10735;Name=VMS06_RS10735;end_range=21829,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS10735;partial=true;pseudo=true NZ_JAVXZI010000008.1 Protein Homology CDS 21725 21829 . - 0 ID=cds-VMS06_RS10735;Parent=gene-VMS06_RS10735;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=21829,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227031.1;locus_tag=VMS06_RS10735;partial=true;product=ASCH domain-containing protein;pseudo=true;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 21947 22708 . + . ID=gene-VMS06_RS10740;Name=VMS06_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10740 NZ_JAVXZI010000008.1 Protein Homology CDS 21947 22708 . + 0 ID=cds-WP_023300017.1;Parent=gene-VMS06_RS10740;Dbxref=GenBank:WP_023300017.1;Name=WP_023300017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460520.1;locus_tag=VMS06_RS10740;product=OBAP family protein;protein_id=WP_023300017.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 22783 26091 . - . ID=gene-VMS06_RS10745;Name=VMS06_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10745 NZ_JAVXZI010000008.1 Protein Homology CDS 22783 26091 . - 0 ID=cds-WP_063138218.1;Parent=gene-VMS06_RS10745;Dbxref=GenBank:WP_063138218.1;Name=WP_063138218.1;Ontology_term=GO:0046903,GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;go_process=secretion|0046903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192563.1;locus_tag=VMS06_RS10745;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_063138218.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 26425 27390 . - . ID=gene-VMS06_RS10750;Name=VMS06_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10750 NZ_JAVXZI010000008.1 Protein Homology CDS 26425 27390 . - 0 ID=cds-WP_048966601.1;Parent=gene-VMS06_RS10750;Dbxref=GenBank:WP_048966601.1;Name=WP_048966601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015741994.1;locus_tag=VMS06_RS10750;product=magnesium and cobalt transport protein CorA;protein_id=WP_048966601.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 27512 28369 . - . ID=gene-VMS06_RS10755;Name=VMS06_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10755 NZ_JAVXZI010000008.1 Protein Homology CDS 27512 28369 . - 0 ID=cds-WP_038415997.1;Parent=gene-VMS06_RS10755;Dbxref=GenBank:WP_038415997.1;Name=WP_038415997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017372680.1;locus_tag=VMS06_RS10755;product=alpha/beta hydrolase family protein;protein_id=WP_038415997.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 28737 29102 . + . ID=gene-VMS06_RS10760;Name=VMS06_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10760 NZ_JAVXZI010000008.1 Protein Homology CDS 28737 29102 . + 0 ID=cds-WP_045621686.1;Parent=gene-VMS06_RS10760;Dbxref=GenBank:WP_045621686.1;Name=WP_045621686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694067.1;locus_tag=VMS06_RS10760;product=hypothetical protein;protein_id=WP_045621686.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 29113 31209 . + . ID=gene-VMS06_RS10765;Name=VMS06_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10765 NZ_JAVXZI010000008.1 Protein Homology CDS 29113 31209 . + 0 ID=cds-WP_022648004.1;Parent=gene-VMS06_RS10765;Dbxref=GenBank:WP_022648004.1;Name=WP_022648004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808844.1;locus_tag=VMS06_RS10765;product=pyrroloquinoline quinone-dependent dehydrogenase;protein_id=WP_022648004.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 31284 31874 . - . ID=gene-VMS06_RS10770;Name=VMS06_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10770 NZ_JAVXZI010000008.1 Protein Homology CDS 31284 31874 . - 0 ID=cds-WP_022648005.1;Parent=gene-VMS06_RS10770;Dbxref=GenBank:WP_022648005.1;Name=WP_022648005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694065.1;locus_tag=VMS06_RS10770;product=DUF4142 domain-containing protein;protein_id=WP_022648005.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 32124 32402 . + . ID=gene-VMS06_RS10775;Name=VMS06_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10775 NZ_JAVXZI010000008.1 Protein Homology CDS 32124 32402 . + 0 ID=cds-WP_063147370.1;Parent=gene-VMS06_RS10775;Dbxref=GenBank:WP_063147370.1;Name=WP_063147370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002892402.1;locus_tag=VMS06_RS10775;product=YdgH/BhsA/McbA family protein;protein_id=WP_063147370.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 32710 32883 . + . ID=gene-VMS06_RS10780;Name=VMS06_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10780 NZ_JAVXZI010000008.1 Protein Homology CDS 32710 32883 . + 0 ID=cds-WP_074136302.1;Parent=gene-VMS06_RS10780;Dbxref=GenBank:WP_074136302.1;Name=WP_074136302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694064.1;locus_tag=VMS06_RS10780;product=GnsA/GnsB family addiction module toxin;protein_id=WP_074136302.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 32971 33807 . - . ID=gene-VMS06_RS10785;Name=VMS06_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10785 NZ_JAVXZI010000008.1 Protein Homology CDS 32971 33807 . - 0 ID=cds-WP_022648007.1;Parent=gene-VMS06_RS10785;Dbxref=GenBank:WP_022648007.1;Name=WP_022648007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227809.1;locus_tag=VMS06_RS10785;product=alpha/beta fold hydrolase;protein_id=WP_022648007.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 34467 35456 . - . ID=gene-VMS06_RS10790;Name=VMS06_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10790 NZ_JAVXZI010000008.1 Protein Homology CDS 34467 35456 . - 0 ID=cds-WP_063147369.1;Parent=gene-VMS06_RS10790;Dbxref=GenBank:WP_063147369.1;Name=WP_063147369.1;Ontology_term=GO:0008720,GO:0070404;gbkey=CDS;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,NADH binding|0070404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762236.1;locus_tag=VMS06_RS10790;product=2-hydroxyacid dehydrogenase;protein_id=WP_063147369.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 35667 38306 . + . ID=gene-VMS06_RS10795;Name=VMS06_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10795 NZ_JAVXZI010000008.1 Protein Homology CDS 35667 38306 . + 0 ID=cds-WP_063147368.1;Parent=gene-VMS06_RS10795;Dbxref=GenBank:WP_063147368.1;Name=WP_063147368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000900941.1;locus_tag=VMS06_RS10795;product=YdbH family protein;protein_id=WP_063147368.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 38303 38494 . + . ID=gene-VMS06_RS10800;Name=VMS06_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10800 NZ_JAVXZI010000008.1 Protein Homology CDS 38303 38494 . + 0 ID=cds-WP_003857369.1;Parent=gene-VMS06_RS10800;Dbxref=GenBank:WP_003857369.1;Name=WP_003857369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502388.1;locus_tag=VMS06_RS10800;product=YnbE family lipoprotein;protein_id=WP_003857369.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 38502 38819 . + . ID=gene-VMS06_RS10805;Name=VMS06_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10805 NZ_JAVXZI010000008.1 Protein Homology CDS 38502 38819 . + 0 ID=cds-WP_022648010.1;Parent=gene-VMS06_RS10805;Dbxref=GenBank:WP_022648010.1;Name=WP_022648010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169919.1;locus_tag=VMS06_RS10805;product=YdbL family probable chaperone protein;protein_id=WP_022648010.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 38820 39728 . - . ID=gene-VMS06_RS10810;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=protein_coding;locus_tag=VMS06_RS10810 NZ_JAVXZI010000008.1 Protein Homology CDS 38820 39728 . - 0 ID=cds-WP_023300024.1;Parent=gene-VMS06_RS10810;Dbxref=GenBank:WP_023300024.1;Name=WP_023300024.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=feaR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570600.1;locus_tag=VMS06_RS10810;product=transcriptional regulator FeaR;protein_id=WP_023300024.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 39970 41469 . + . ID=gene-VMS06_RS10815;Name=VMS06_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10815 NZ_JAVXZI010000008.1 Protein Homology CDS 39970 41469 . + 0 ID=cds-WP_022648012.1;Parent=gene-VMS06_RS10815;Dbxref=GenBank:WP_022648012.1;Name=WP_022648012.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415903.4;locus_tag=VMS06_RS10815;product=aldehyde dehydrogenase family protein;protein_id=WP_022648012.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 41568 42674 . - . ID=gene-VMS06_RS10820;Name=VMS06_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10820 NZ_JAVXZI010000008.1 Protein Homology CDS 41568 42674 . - 0 ID=cds-WP_063843858.1;Parent=gene-VMS06_RS10820;Dbxref=GenBank:WP_063843858.1;Name=WP_063843858.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693486.1;locus_tag=VMS06_RS10820;product=GGDEF domain-containing protein;protein_id=WP_063843858.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq pseudogene 42727 44700 . - . ID=gene-VMS06_RS10825;Name=VMS06_RS10825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS10825;pseudo=true NZ_JAVXZI010000008.1 Protein Homology CDS 42727 44700 . - 0 ID=cds-VMS06_RS10825;Parent=gene-VMS06_RS10825;Note=internal stop;Ontology_term=GO:0008484,GO:0046872,GO:0046983;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693485.1;locus_tag=VMS06_RS10825;product=alkyl/aryl-sulfatase;pseudo=true;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 44867 47140 . - . ID=gene-VMS06_RS10830;Name=tynA;gbkey=Gene;gene=tynA;gene_biotype=protein_coding;locus_tag=VMS06_RS10830 NZ_JAVXZI010000008.1 Protein Homology CDS 44867 47140 . - 0 ID=cds-WP_063147366.1;Parent=gene-VMS06_RS10830;Dbxref=GenBank:WP_063147366.1;Name=WP_063147366.1;Ontology_term=GO:0009308,GO:0005507,GO:0008131,GO:0048038;gbkey=CDS;gene=tynA;go_function=copper ion binding|0005507||IEA,primary methylamine oxidase activity|0008131||IEA,quinone binding|0048038||IEA;go_process=amine metabolic process|0009308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415904.3;locus_tag=VMS06_RS10830;product=primary-amine oxidase;protein_id=WP_063147366.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 47300 47695 . - . ID=gene-VMS06_RS10835;Name=VMS06_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10835 NZ_JAVXZI010000008.1 Protein Homology CDS 47300 47695 . - 0 ID=cds-WP_063147365.1;Parent=gene-VMS06_RS10835;Dbxref=GenBank:WP_063147365.1;Name=WP_063147365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831753.1;locus_tag=VMS06_RS10835;product=hypothetical protein;protein_id=WP_063147365.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 47673 47966 . - . ID=gene-VMS06_RS10840;Name=VMS06_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10840 NZ_JAVXZI010000008.1 Protein Homology CDS 47673 47966 . - 0 ID=cds-WP_226856374.1;Parent=gene-VMS06_RS10840;Dbxref=GenBank:WP_226856374.1;Name=WP_226856374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831754.1;locus_tag=VMS06_RS10840;product=polymorphic toxin type 44 domain-containing protein;protein_id=WP_226856374.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 48080 48562 . - . ID=gene-VMS06_RS10845;Name=VMS06_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10845 NZ_JAVXZI010000008.1 Protein Homology CDS 48080 48562 . - 0 ID=cds-WP_022648017.1;Parent=gene-VMS06_RS10845;Dbxref=GenBank:WP_022648017.1;Name=WP_022648017.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096763.1;locus_tag=VMS06_RS10845;product=Hcp family type VI secretion system effector;protein_id=WP_022648017.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 48788 50827 . - . ID=gene-VMS06_RS10850;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;locus_tag=VMS06_RS10850 NZ_JAVXZI010000008.1 Protein Homology CDS 48788 50827 . - 0 ID=cds-WP_063147363.1;Parent=gene-VMS06_RS10850;Dbxref=GenBank:WP_063147363.1;Name=WP_063147363.1;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502382.1;locus_tag=VMS06_RS10850;product=phenylacetic acid degradation bifunctional protein PaaZ;protein_id=WP_063147363.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 51113 52042 . + . ID=gene-VMS06_RS10855;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=VMS06_RS10855 NZ_JAVXZI010000008.1 Protein Homology CDS 51113 52042 . + 0 ID=cds-WP_003857355.1;Parent=gene-VMS06_RS10855;Dbxref=GenBank:WP_003857355.1;Name=WP_003857355.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415906.1;locus_tag=VMS06_RS10855;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaA;protein_id=WP_003857355.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 52055 52342 . + . ID=gene-VMS06_RS10860;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=VMS06_RS10860 NZ_JAVXZI010000008.1 Protein Homology CDS 52055 52342 . + 0 ID=cds-WP_003857353.1;Parent=gene-VMS06_RS10860;Dbxref=GenBank:WP_003857353.1;Name=WP_003857353.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415907.1;locus_tag=VMS06_RS10860;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaB;protein_id=WP_003857353.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 52351 53097 . + . ID=gene-VMS06_RS10865;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=VMS06_RS10865 NZ_JAVXZI010000008.1 Protein Homology CDS 52351 53097 . + 0 ID=cds-WP_063147362.1;Parent=gene-VMS06_RS10865;Dbxref=GenBank:WP_063147362.1;Name=WP_063147362.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415908.1;locus_tag=VMS06_RS10865;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaC;protein_id=WP_063147362.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 53109 53606 . + . ID=gene-VMS06_RS10870;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;locus_tag=VMS06_RS10870 NZ_JAVXZI010000008.1 Protein Homology CDS 53109 53606 . + 0 ID=cds-WP_063138212.1;Parent=gene-VMS06_RS10870;Dbxref=GenBank:WP_063138212.1;Name=WP_063138212.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaD;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415909.4;locus_tag=VMS06_RS10870;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaD;protein_id=WP_063138212.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 53614 54684 . + . ID=gene-VMS06_RS10875;Name=paaE;gbkey=Gene;gene=paaE;gene_biotype=protein_coding;locus_tag=VMS06_RS10875 NZ_JAVXZI010000008.1 Protein Homology CDS 53614 54684 . + 0 ID=cds-WP_063147361.1;Parent=gene-VMS06_RS10875;Dbxref=GenBank:WP_063147361.1;Name=WP_063147361.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaE;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415910.1;locus_tag=VMS06_RS10875;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaE;protein_id=WP_063147361.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 54681 55448 . + . ID=gene-VMS06_RS10880;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=VMS06_RS10880 NZ_JAVXZI010000008.1 Protein Homology CDS 54681 55448 . + 0 ID=cds-WP_022648023.1;Parent=gene-VMS06_RS10880;Dbxref=GenBank:WP_022648023.1;Name=WP_022648023.1;gbkey=CDS;gene=paaF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415911.1;locus_tag=VMS06_RS10880;product=2%2C3-dehydroadipyl-CoA hydratase PaaF;protein_id=WP_022648023.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 55448 56236 . + . ID=gene-VMS06_RS10885;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=VMS06_RS10885 NZ_JAVXZI010000008.1 Protein Homology CDS 55448 56236 . + 0 ID=cds-WP_100148794.1;Parent=gene-VMS06_RS10885;Dbxref=GenBank:WP_100148794.1;Name=WP_100148794.1;Ontology_term=GO:0010124,GO:0016853;gbkey=CDS;gene=paaG;go_function=isomerase activity|0016853||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415912.1;locus_tag=VMS06_RS10885;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_100148794.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 56238 57662 . + . ID=gene-VMS06_RS10890;Name=paaH;gbkey=Gene;gene=paaH;gene_biotype=protein_coding;locus_tag=VMS06_RS10890 NZ_JAVXZI010000008.1 Protein Homology CDS 56238 57662 . + 0 ID=cds-WP_023300031.1;Parent=gene-VMS06_RS10890;Dbxref=GenBank:WP_023300031.1;Name=WP_023300031.1;Ontology_term=GO:0010124,GO:0008691;gbkey=CDS;gene=paaH;go_function=3-hydroxybutyryl-CoA dehydrogenase activity|0008691||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808820.1;locus_tag=VMS06_RS10890;product=3-hydroxyacyl-CoA dehydrogenase PaaH;protein_id=WP_023300031.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 57652 58074 . + . ID=gene-VMS06_RS10895;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=VMS06_RS10895 NZ_JAVXZI010000008.1 Protein Homology CDS 57652 58074 . + 0 ID=cds-WP_023300032.1;Parent=gene-VMS06_RS10895;Dbxref=GenBank:WP_023300032.1;Name=WP_023300032.1;Ontology_term=GO:0010124,GO:0016790;gbkey=CDS;gene=paaI;go_function=thiolester hydrolase activity|0016790||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415914.1;locus_tag=VMS06_RS10895;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_023300032.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 58074 59279 . + . ID=gene-VMS06_RS10900;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=VMS06_RS10900 NZ_JAVXZI010000008.1 Protein Homology CDS 58074 59279 . + 0 ID=cds-WP_022648027.1;Parent=gene-VMS06_RS10900;Dbxref=GenBank:WP_022648027.1;Name=WP_022648027.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415915.1;locus_tag=VMS06_RS10900;product=3-oxoadipyl-CoA thiolase;protein_id=WP_022648027.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 59306 60622 . + . ID=gene-VMS06_RS10905;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=VMS06_RS10905 NZ_JAVXZI010000008.1 Protein Homology CDS 59306 60622 . + 0 ID=cds-WP_023306139.1;Parent=gene-VMS06_RS10905;Dbxref=GenBank:WP_023306139.1;Name=WP_023306139.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaK;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070178.1;locus_tag=VMS06_RS10905;product=phenylacetate--CoA ligase PaaK;protein_id=WP_023306139.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 60745 61680 . + . ID=gene-VMS06_RS10910;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=protein_coding;locus_tag=VMS06_RS10910 NZ_JAVXZI010000008.1 Protein Homology CDS 60745 61680 . + 0 ID=cds-WP_032622213.1;Parent=gene-VMS06_RS10910;Dbxref=GenBank:WP_032622213.1;Name=WP_032622213.1;Ontology_term=GO:0006351;gbkey=CDS;gene=paaX;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693474.1;locus_tag=VMS06_RS10910;product=phenylacetic acid degradation operon negative regulatory protein PaaX;protein_id=WP_032622213.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 61690 62295 . + . ID=gene-VMS06_RS10915;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=protein_coding;locus_tag=VMS06_RS10915 NZ_JAVXZI010000008.1 Protein Homology CDS 61690 62295 . + 0 ID=cds-WP_023300036.1;Parent=gene-VMS06_RS10915;Dbxref=GenBank:WP_023300036.1;Name=WP_023300036.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaY;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810541.1;locus_tag=VMS06_RS10915;product=phenylacetic acid degradation protein PaaY;protein_id=WP_023300036.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 62475 64472 . + . ID=gene-VMS06_RS10920;Name=VMS06_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10920 NZ_JAVXZI010000008.1 Protein Homology CDS 62475 64472 . + 0 ID=cds-WP_063147360.1;Parent=gene-VMS06_RS10920;Dbxref=GenBank:WP_063147360.1;Name=WP_063147360.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119118.1;locus_tag=VMS06_RS10920;product=BCCT family transporter;protein_id=WP_063147360.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 64511 65146 . - . ID=gene-VMS06_RS10925;Name=VMS06_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10925 NZ_JAVXZI010000008.1 Protein Homology CDS 64511 65146 . - 0 ID=cds-WP_063147359.1;Parent=gene-VMS06_RS10925;Dbxref=GenBank:WP_063147359.1;Name=WP_063147359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384510.1;locus_tag=VMS06_RS10925;product=helix-turn-helix domain-containing protein;protein_id=WP_063147359.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 65350 67326 . + . ID=gene-VMS06_RS10930;Name=VMS06_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10930 NZ_JAVXZI010000008.1 Protein Homology CDS 65350 67326 . + 0 ID=cds-WP_022648033.1;Parent=gene-VMS06_RS10930;Dbxref=GenBank:WP_022648033.1;Name=WP_022648033.1;Ontology_term=GO:0008484,GO:0046872,GO:0046983;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078314.1;locus_tag=VMS06_RS10930;product=alkyl/aryl-sulfatase;protein_id=WP_022648033.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 67380 68132 . - . ID=gene-VMS06_RS10935;Name=VMS06_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10935 NZ_JAVXZI010000008.1 Protein Homology CDS 67380 68132 . - 0 ID=cds-WP_022648034.1;Parent=gene-VMS06_RS10935;Dbxref=GenBank:WP_022648034.1;Name=WP_022648034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810543.1;locus_tag=VMS06_RS10935;product=hypothetical protein;protein_id=WP_022648034.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 68134 68331 . - . ID=gene-VMS06_RS10940;Name=VMS06_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10940 NZ_JAVXZI010000008.1 Protein Homology CDS 68134 68331 . - 0 ID=cds-WP_022648035.1;Parent=gene-VMS06_RS10940;Dbxref=GenBank:WP_022648035.1;Name=WP_022648035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006175081.1;locus_tag=VMS06_RS10940;product=hypothetical protein;protein_id=WP_022648035.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 68590 69024 . + . ID=gene-VMS06_RS10945;Name=VMS06_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10945 NZ_JAVXZI010000008.1 Protein Homology CDS 68590 69024 . + 0 ID=cds-WP_022648036.1;Parent=gene-VMS06_RS10945;Dbxref=GenBank:WP_022648036.1;Name=WP_022648036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946719.1;locus_tag=VMS06_RS10945;product=nuclear transport factor 2 family protein;protein_id=WP_022648036.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 69021 69740 . + . ID=gene-VMS06_RS10950;Name=VMS06_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10950 NZ_JAVXZI010000008.1 Protein Homology CDS 69021 69740 . + 0 ID=cds-WP_063147358.1;Parent=gene-VMS06_RS10950;Dbxref=GenBank:WP_063147358.1;Name=WP_063147358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693470.1;locus_tag=VMS06_RS10950;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_063147358.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 69737 70996 . + . ID=gene-VMS06_RS10955;Name=VMS06_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10955 NZ_JAVXZI010000008.1 Protein Homology CDS 69737 70996 . + 0 ID=cds-WP_058646695.1;Parent=gene-VMS06_RS10955;Dbxref=GenBank:WP_058646695.1;Name=WP_058646695.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883745.1;locus_tag=VMS06_RS10955;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_058646695.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 70998 71720 . + . ID=gene-VMS06_RS10960;Name=VMS06_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10960 NZ_JAVXZI010000008.1 Protein Homology CDS 70998 71720 . + 0 ID=cds-WP_023306144.1;Parent=gene-VMS06_RS10960;Dbxref=GenBank:WP_023306144.1;Name=WP_023306144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224874.1;locus_tag=VMS06_RS10960;product=DUF1365 domain-containing protein;protein_id=WP_023306144.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 71717 72937 . + . ID=gene-VMS06_RS10965;Name=VMS06_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10965 NZ_JAVXZI010000008.1 Protein Homology CDS 71717 72937 . + 0 ID=cds-WP_063147357.1;Parent=gene-VMS06_RS10965;Dbxref=GenBank:WP_063147357.1;Name=WP_063147357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224873.1;locus_tag=VMS06_RS10965;product=SAM-dependent methyltransferase;protein_id=WP_063147357.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 72934 73419 . + . ID=gene-VMS06_RS10970;Name=VMS06_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10970 NZ_JAVXZI010000008.1 Protein Homology CDS 72934 73419 . + 0 ID=cds-WP_023300043.1;Parent=gene-VMS06_RS10970;Dbxref=GenBank:WP_023300043.1;Name=WP_023300043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810550.1;locus_tag=VMS06_RS10970;product=DUF2878 domain-containing protein;protein_id=WP_023300043.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 73416 73940 . + . ID=gene-VMS06_RS10975;Name=VMS06_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10975 NZ_JAVXZI010000008.1 Protein Homology CDS 73416 73940 . + 0 ID=cds-WP_023306146.1;Parent=gene-VMS06_RS10975;Dbxref=GenBank:WP_023306146.1;Name=WP_023306146.1;Ontology_term=GO:0009813,GO:0045430;gbkey=CDS;go_function=chalcone isomerase activity|0045430||IEA;go_process=flavonoid biosynthetic process|0009813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096715.1;locus_tag=VMS06_RS10975;product=chalcone isomerase family protein;protein_id=WP_023306146.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 73937 74470 . + . ID=gene-VMS06_RS10980;Name=VMS06_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10980 NZ_JAVXZI010000008.1 Protein Homology CDS 73937 74470 . + 0 ID=cds-WP_023300045.1;Parent=gene-VMS06_RS10980;Dbxref=GenBank:WP_023300045.1;Name=WP_023300045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857306.1;locus_tag=VMS06_RS10980;product=DUF3833 domain-containing protein;protein_id=WP_023300045.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 74467 74925 . - . ID=gene-VMS06_RS10985;Name=VMS06_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10985 NZ_JAVXZI010000008.1 Protein Homology CDS 74467 74925 . - 0 ID=cds-WP_022648044.1;Parent=gene-VMS06_RS10985;Dbxref=GenBank:WP_022648044.1;Name=WP_022648044.1;Ontology_term=GO:0055085,GO:0005215,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857305.1;locus_tag=VMS06_RS10985;product=DMT family transporter;protein_id=WP_022648044.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 74930 75364 . - . ID=gene-VMS06_RS10990;Name=VMS06_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10990 NZ_JAVXZI010000008.1 Protein Homology CDS 74930 75364 . - 0 ID=cds-WP_003857304.1;Parent=gene-VMS06_RS10990;Dbxref=GenBank:WP_003857304.1;Name=WP_003857304.1;Ontology_term=GO:0055085,GO:0005215,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541664.1;locus_tag=VMS06_RS10990;product=DMT family transporter;protein_id=WP_003857304.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 75463 76395 . + . ID=gene-VMS06_RS10995;Name=VMS06_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS10995 NZ_JAVXZI010000008.1 Protein Homology CDS 75463 76395 . + 0 ID=cds-WP_032624303.1;Parent=gene-VMS06_RS10995;Dbxref=GenBank:WP_032624303.1;Name=WP_032624303.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570582.1;locus_tag=VMS06_RS10995;product=LysR family transcriptional regulator;protein_id=WP_032624303.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 76399 77427 . - . ID=gene-VMS06_RS11000;Name=VMS06_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11000 NZ_JAVXZI010000008.1 Protein Homology CDS 76399 77427 . - 0 ID=cds-WP_003857302.1;Parent=gene-VMS06_RS11000;Dbxref=GenBank:WP_003857302.1;Name=WP_003857302.1;Ontology_term=GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006175106.1;locus_tag=VMS06_RS11000;product=methionine synthase;protein_id=WP_003857302.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 77454 78428 . - . ID=gene-VMS06_RS11005;Name=VMS06_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11005 NZ_JAVXZI010000008.1 Protein Homology CDS 77454 78428 . - 0 ID=cds-WP_063147385.1;Parent=gene-VMS06_RS11005;Dbxref=GenBank:WP_063147385.1;Name=WP_063147385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654753.1;locus_tag=VMS06_RS11005;product=DUF1852 domain-containing protein;protein_id=WP_063147385.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 78597 79136 . + . ID=gene-VMS06_RS11010;Name=VMS06_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11010 NZ_JAVXZI010000008.1 Protein Homology CDS 78597 79136 . + 0 ID=cds-WP_022648048.1;Parent=gene-VMS06_RS11010;Dbxref=GenBank:WP_022648048.1;Name=WP_022648048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=VMS06_RS11010;product=DUF2058 domain-containing protein;protein_id=WP_022648048.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 79144 79830 . - . ID=gene-VMS06_RS11015;Name=VMS06_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11015 NZ_JAVXZI010000008.1 Protein Homology CDS 79144 79830 . - 0 ID=cds-WP_063147356.1;Parent=gene-VMS06_RS11015;Dbxref=GenBank:WP_063147356.1;Name=WP_063147356.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570578.1;locus_tag=VMS06_RS11015;product=RluA family pseudouridine synthase;protein_id=WP_063147356.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 79920 80525 . - . ID=gene-VMS06_RS11020;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=VMS06_RS11020 NZ_JAVXZI010000008.1 Protein Homology CDS 79920 80525 . - 0 ID=cds-WP_022648050.1;Parent=gene-VMS06_RS11020;Dbxref=GenBank:WP_022648050.1;Name=WP_022648050.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460601.1;locus_tag=VMS06_RS11020;product=FMN-dependent NADH-azoreductase;protein_id=WP_022648050.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 80729 84631 . + . ID=gene-VMS06_RS11025;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=VMS06_RS11025 NZ_JAVXZI010000008.1 Protein Homology CDS 80729 84631 . + 0 ID=cds-WP_063147355.1;Parent=gene-VMS06_RS11025;Dbxref=GenBank:WP_063147355.1;Name=WP_063147355.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415931.4;locus_tag=VMS06_RS11025;product=ATP-dependent RNA helicase HrpA;protein_id=WP_063147355.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq pseudogene 84714 85154 . - . ID=gene-VMS06_RS11030;Name=VMS06_RS11030;end_range=85154,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS11030;partial=true;pseudo=true NZ_JAVXZI010000008.1 Protein Homology CDS 84714 85154 . - 0 ID=cds-VMS06_RS11030;Parent=gene-VMS06_RS11030;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;end_range=85154,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502311.1;locus_tag=VMS06_RS11030;partial=true;product=O-methyltransferase;pseudo=true;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 85216 86595 . - . ID=gene-VMS06_RS11035;Name=VMS06_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11035 NZ_JAVXZI010000008.1 Protein Homology CDS 85216 86595 . - 0 ID=cds-WP_063147354.1;Parent=gene-VMS06_RS11035;Dbxref=GenBank:WP_063147354.1;Name=WP_063147354.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857295.1;locus_tag=VMS06_RS11035;product=efflux transporter outer membrane subunit;protein_id=WP_063147354.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 86592 87674 . - . ID=gene-VMS06_RS11040;Name=VMS06_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11040 NZ_JAVXZI010000008.1 Protein Homology CDS 86592 87674 . - 0 ID=cds-WP_032624299.1;Parent=gene-VMS06_RS11040;Dbxref=GenBank:WP_032624299.1;Name=WP_032624299.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096702.1;locus_tag=VMS06_RS11040;product=HlyD family secretion protein;protein_id=WP_032624299.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 87697 89349 . - . ID=gene-VMS06_RS11045;Name=VMS06_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11045 NZ_JAVXZI010000008.1 Protein Homology CDS 87697 89349 . - 0 ID=cds-WP_023300055.1;Parent=gene-VMS06_RS11045;Dbxref=GenBank:WP_023300055.1;Name=WP_023300055.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502308.1;locus_tag=VMS06_RS11045;product=MFS transporter;protein_id=WP_023300055.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 89508 90827 . - . ID=gene-VMS06_RS11050;Name=VMS06_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11050 NZ_JAVXZI010000008.1 Protein Homology CDS 89508 90827 . - 0 ID=cds-WP_023300056.1;Parent=gene-VMS06_RS11050;Dbxref=GenBank:WP_023300056.1;Name=WP_023300056.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831832.1;locus_tag=VMS06_RS11050;product=MFS transporter;protein_id=WP_023300056.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 91219 92013 . + . ID=gene-VMS06_RS11055;Name=VMS06_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11055 NZ_JAVXZI010000008.1 Protein Homology CDS 91219 92013 . + 0 ID=cds-WP_022648057.1;Parent=gene-VMS06_RS11055;Dbxref=GenBank:WP_022648057.1;Name=WP_022648057.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384495.1;locus_tag=VMS06_RS11055;product=YdcF family protein;protein_id=WP_022648057.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 92213 93652 . + . ID=gene-VMS06_RS11060;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=VMS06_RS11060 NZ_JAVXZI010000008.1 Protein Homology CDS 92213 93652 . + 0 ID=cds-WP_323630659.1;Parent=gene-VMS06_RS11060;Dbxref=GenBank:WP_323630659.1;Name=WP_323630659.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310048.1;locus_tag=VMS06_RS11060;product=aldehyde dehydrogenase;protein_id=WP_323630659.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 94161 94691 . + . ID=gene-VMS06_RS11065;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=VMS06_RS11065 NZ_JAVXZI010000008.1 Protein Homology CDS 94161 94691 . + 0 ID=cds-WP_023300059.1;Parent=gene-VMS06_RS11065;Dbxref=GenBank:WP_023300059.1;Name=WP_023300059.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883764.1;locus_tag=VMS06_RS11065;product=cytochrome b561;protein_id=WP_023300059.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 94734 95801 . - . ID=gene-VMS06_RS11070;Name=VMS06_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11070 NZ_JAVXZI010000008.1 Protein Homology CDS 94734 95801 . - 0 ID=cds-WP_038416023.1;Parent=gene-VMS06_RS11070;Dbxref=GenBank:WP_038416023.1;Name=WP_038416023.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693457.1;locus_tag=VMS06_RS11070;product=oxidoreductase;protein_id=WP_038416023.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 95815 96558 . - . ID=gene-VMS06_RS11075;Name=VMS06_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11075 NZ_JAVXZI010000008.1 Protein Homology CDS 95815 96558 . - 0 ID=cds-WP_022648061.1;Parent=gene-VMS06_RS11075;Dbxref=GenBank:WP_022648061.1;Name=WP_022648061.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384492.1;locus_tag=VMS06_RS11075;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_022648061.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq pseudogene 97296 98626 . + . ID=gene-VMS06_RS11080;Name=VMS06_RS11080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS11080;pseudo=true NZ_JAVXZI010000008.1 Protein Homology CDS 97296 98626 . + 0 ID=cds-VMS06_RS11080;Parent=gene-VMS06_RS11080;Note=frameshifted;Ontology_term=GO:0055085,GO:0015562,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810572.1;locus_tag=VMS06_RS11080;product=TolC family outer membrane protein;pseudo=true;transl_table=11 NZ_JAVXZI010000008.1 RefSeq pseudogene 98747 104695 . + . ID=gene-VMS06_RS22880;Name=VMS06_RS22880;end_range=104695,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22880;partial=true;pseudo=true NZ_JAVXZI010000008.1 Protein Homology CDS 98747 104695 . + 0 ID=cds-VMS06_RS22880;Parent=gene-VMS06_RS22880;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=104695,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016248427.1;locus_tag=VMS06_RS22880;partial=true;product=Ig-like domain-containing protein;pseudo=true;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 104788 114954 . + . ID=gene-VMS06_RS22885;Name=VMS06_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22885 NZ_JAVXZI010000008.1 Protein Homology CDS 104788 114954 . + 0 ID=cds-WP_412524964.1;Parent=gene-VMS06_RS22885;Dbxref=GenBank:WP_412524964.1;Name=WP_412524964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016231611.1;locus_tag=VMS06_RS22885;product=Ig-like domain-containing protein;protein_id=WP_412524964.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 115131 117296 . + . ID=gene-VMS06_RS11090;Name=VMS06_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11090 NZ_JAVXZI010000008.1 Protein Homology CDS 115131 117296 . + 0 ID=cds-WP_022648065.1;Parent=gene-VMS06_RS11090;Dbxref=GenBank:WP_022648065.1;Name=WP_022648065.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810575.1;locus_tag=VMS06_RS11090;product=type I secretion system permease/ATPase;protein_id=WP_022648065.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 117293 118468 . + . ID=gene-VMS06_RS11095;Name=VMS06_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11095 NZ_JAVXZI010000008.1 Protein Homology CDS 117293 118468 . + 0 ID=cds-WP_022648066.1;Parent=gene-VMS06_RS11095;Dbxref=GenBank:WP_022648066.1;Name=WP_022648066.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384014.1;locus_tag=VMS06_RS11095;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_022648066.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 118502 119386 . - . ID=gene-VMS06_RS11100;Name=VMS06_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11100 NZ_JAVXZI010000008.1 Protein Homology CDS 118502 119386 . - 0 ID=cds-WP_023300064.1;Parent=gene-VMS06_RS11100;Dbxref=GenBank:WP_023300064.1;Name=WP_023300064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502296.1;locus_tag=VMS06_RS11100;product=hypothetical protein;protein_id=WP_023300064.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 119673 121130 . + . ID=gene-VMS06_RS11105;Name=VMS06_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11105 NZ_JAVXZI010000008.1 Protein Homology CDS 119673 121130 . + 0 ID=cds-WP_063147350.1;Parent=gene-VMS06_RS11105;Dbxref=GenBank:WP_063147350.1;Name=WP_063147350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384012.1;locus_tag=VMS06_RS11105;product=EAL domain-containing protein;protein_id=WP_063147350.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 121215 121493 . - . ID=gene-VMS06_RS11110;Name=VMS06_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11110 NZ_JAVXZI010000008.1 Protein Homology CDS 121215 121493 . - 0 ID=cds-WP_075208094.1;Parent=gene-VMS06_RS11110;Dbxref=GenBank:WP_075208094.1;Name=WP_075208094.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384011.1;locus_tag=VMS06_RS11110;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_075208094.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 121517 121816 . - . ID=gene-VMS06_RS11115;Name=VMS06_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11115 NZ_JAVXZI010000008.1 Protein Homology CDS 121517 121816 . - 0 ID=cds-WP_023306164.1;Parent=gene-VMS06_RS11115;Dbxref=GenBank:WP_023306164.1;Name=WP_023306164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857266.1;locus_tag=VMS06_RS11115;product=hypothetical protein;protein_id=WP_023306164.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 121929 122168 . - . ID=gene-VMS06_RS11120;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=VMS06_RS11120 NZ_JAVXZI010000008.1 Protein Homology CDS 121929 122168 . - 0 ID=cds-WP_003857265.1;Parent=gene-VMS06_RS11120;Dbxref=GenBank:WP_003857265.1;Name=WP_003857265.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857265.1;locus_tag=VMS06_RS11120;product=regulatory protein YcgZ;protein_id=WP_003857265.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 122361 122633 . - . ID=gene-VMS06_RS11125;Name=VMS06_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11125 NZ_JAVXZI010000008.1 Protein Homology CDS 122361 122633 . - 0 ID=cds-WP_003857263.1;Parent=gene-VMS06_RS11125;Dbxref=GenBank:WP_003857263.1;Name=WP_003857263.1;Ontology_term=GO:0043022,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883773.1;locus_tag=VMS06_RS11125;product=ElaB/YgaM/YqjD family protein;protein_id=WP_003857263.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 122820 123425 . - . ID=gene-VMS06_RS11130;Name=VMS06_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11130 NZ_JAVXZI010000008.1 Protein Homology CDS 122820 123425 . - 0 ID=cds-WP_063147349.1;Parent=gene-VMS06_RS11130;Dbxref=GenBank:WP_063147349.1;Name=WP_063147349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384009.1;locus_tag=VMS06_RS11130;product=hypothetical protein;protein_id=WP_063147349.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 123669 123944 . + . ID=gene-VMS06_RS11135;Name=VMS06_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11135 NZ_JAVXZI010000008.1 Protein Homology CDS 123669 123944 . + 0 ID=cds-WP_003857256.1;Parent=gene-VMS06_RS11135;Dbxref=GenBank:WP_003857256.1;Name=WP_003857256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460587.1;locus_tag=VMS06_RS11135;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_003857256.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 123977 125095 . + . ID=gene-VMS06_RS11140;Name=VMS06_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11140 NZ_JAVXZI010000008.1 Protein Homology CDS 123977 125095 . + 0 ID=cds-WP_017693450.1;Parent=gene-VMS06_RS11140;Dbxref=GenBank:WP_017693450.1;Name=WP_017693450.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460586.1;locus_tag=VMS06_RS11140;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_017693450.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 125255 126946 . + . ID=gene-VMS06_RS11145;Name=VMS06_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11145 NZ_JAVXZI010000008.1 Protein Homology CDS 125255 126946 . + 0 ID=cds-WP_063147348.1;Parent=gene-VMS06_RS11145;Dbxref=GenBank:WP_063147348.1;Name=WP_063147348.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857249.1;locus_tag=VMS06_RS11145;product=methyl-accepting chemotaxis protein;protein_id=WP_063147348.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 126988 127911 . - . ID=gene-VMS06_RS11150;Name=VMS06_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11150 NZ_JAVXZI010000008.1 Protein Homology CDS 126988 127911 . - 0 ID=cds-WP_022648073.1;Parent=gene-VMS06_RS11150;Dbxref=GenBank:WP_022648073.1;Name=WP_022648073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460584.1;locus_tag=VMS06_RS11150;product=LysR substrate-binding domain-containing protein;protein_id=WP_022648073.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 128139 129482 . + . ID=gene-VMS06_RS11155;Name=hglS;gbkey=Gene;gene=hglS;gene_biotype=protein_coding;gene_synonym=ydcJ;locus_tag=VMS06_RS11155 NZ_JAVXZI010000008.1 Protein Homology CDS 128139 129482 . + 0 ID=cds-WP_063147347.1;Parent=gene-VMS06_RS11155;Dbxref=GenBank:WP_063147347.1;Name=WP_063147347.1;Ontology_term=GO:0051213;gbkey=CDS;gene=hglS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227225.1;locus_tag=VMS06_RS11155;product=2-oxoadipate dioxygenase/decarboxylase HglS;protein_id=WP_063147347.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 129525 131030 . + . ID=gene-VMS06_RS11160;Name=VMS06_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11160 NZ_JAVXZI010000008.1 Protein Homology CDS 129525 131030 . + 0 ID=cds-WP_063147346.1;Parent=gene-VMS06_RS11160;Dbxref=GenBank:WP_063147346.1;Name=WP_063147346.1;Ontology_term=GO:0016298,GO:0052689;gbkey=CDS;go_function=lipase activity|0016298||IEA,carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693448.1;locus_tag=VMS06_RS11160;product=carboxylesterase/lipase family protein;protein_id=WP_063147346.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 131017 131859 . - . ID=gene-VMS06_RS11165;Name=VMS06_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11165 NZ_JAVXZI010000008.1 Protein Homology CDS 131017 131859 . - 0 ID=cds-WP_022648076.1;Parent=gene-VMS06_RS11165;Dbxref=GenBank:WP_022648076.1;Name=WP_022648076.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384003.1;locus_tag=VMS06_RS11165;product=LysR family transcriptional regulator;protein_id=WP_022648076.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 131973 133142 . + . ID=gene-VMS06_RS11170;Name=VMS06_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11170 NZ_JAVXZI010000008.1 Protein Homology CDS 131973 133142 . + 0 ID=cds-WP_023306171.1;Parent=gene-VMS06_RS11170;Dbxref=GenBank:WP_023306171.1;Name=WP_023306171.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016495958.1;locus_tag=VMS06_RS11170;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_023306171.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 133153 133926 . + . ID=gene-VMS06_RS11175;Name=VMS06_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11175 NZ_JAVXZI010000008.1 Protein Homology CDS 133153 133926 . + 0 ID=cds-WP_023300074.1;Parent=gene-VMS06_RS11175;Dbxref=GenBank:WP_023300074.1;Name=WP_023300074.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884183.1;locus_tag=VMS06_RS11175;product=ABC transporter substrate-binding protein;protein_id=WP_023300074.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 134008 134253 . - . ID=gene-VMS06_RS11180;Name=VMS06_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11180 NZ_JAVXZI010000008.1 GeneMarkS-2+ CDS 134008 134253 . - 0 ID=cds-WP_074136297.1;Parent=gene-VMS06_RS11180;Dbxref=GenBank:WP_074136297.1;Name=WP_074136297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS11180;product=hypothetical protein;protein_id=WP_074136297.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 134284 135939 . + . ID=gene-VMS06_RS11185;Name=VMS06_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11185 NZ_JAVXZI010000008.1 Protein Homology CDS 134284 135939 . + 0 ID=cds-WP_032622222.1;Parent=gene-VMS06_RS11185;Dbxref=GenBank:WP_032622222.1;Name=WP_032622222.1;Ontology_term=GO:0016051,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate biosynthetic process|0016051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541545.1;locus_tag=VMS06_RS11185;product=glucan biosynthesis protein D;protein_id=WP_032622222.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 136045 136584 . + . ID=gene-VMS06_RS11190;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=VMS06_RS11190 NZ_JAVXZI010000008.1 Protein Homology CDS 136045 136584 . + 0 ID=cds-WP_022648080.1;Parent=gene-VMS06_RS11190;Dbxref=GenBank:WP_022648080.1;Name=WP_022648080.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857233.1;locus_tag=VMS06_RS11190;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_022648080.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 136579 137559 . - . ID=gene-VMS06_RS11195;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=VMS06_RS11195 NZ_JAVXZI010000008.1 Protein Homology CDS 136579 137559 . - 0 ID=cds-WP_063147345.1;Parent=gene-VMS06_RS11195;Dbxref=GenBank:WP_063147345.1;Name=WP_063147345.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383999.1;locus_tag=VMS06_RS11195;product=YdcK family protein;protein_id=WP_063147345.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 137681 138676 . + . ID=gene-VMS06_RS11200;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=VMS06_RS11200 NZ_JAVXZI010000008.1 Protein Homology CDS 137681 138676 . + 0 ID=cds-WP_063147344.1;Parent=gene-VMS06_RS11200;Dbxref=GenBank:WP_063147344.1;Name=WP_063147344.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693446.1;locus_tag=VMS06_RS11200;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_063147344.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 138676 139269 . + . ID=gene-VMS06_RS11205;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=VMS06_RS11205 NZ_JAVXZI010000008.1 Protein Homology CDS 138676 139269 . + 0 ID=cds-WP_063147343.1;Parent=gene-VMS06_RS11205;Dbxref=GenBank:WP_063147343.1;Name=WP_063147343.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460567.1;locus_tag=VMS06_RS11205;product=tellurite resistance methyltransferase TehB;protein_id=WP_063147343.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 139266 140495 . - . ID=gene-VMS06_RS11210;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=VMS06_RS11210 NZ_JAVXZI010000008.1 Protein Homology CDS 139266 140495 . - 0 ID=cds-WP_023306176.1;Parent=gene-VMS06_RS11210;Dbxref=GenBank:WP_023306176.1;Name=WP_023306176.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570554.1;locus_tag=VMS06_RS11210;product=peptidase T;protein_id=WP_023306176.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 140607 142202 . + . ID=gene-VMS06_RS11215;Name=VMS06_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11215 NZ_JAVXZI010000008.1 Protein Homology CDS 140607 142202 . + 0 ID=cds-WP_022648085.1;Parent=gene-VMS06_RS11215;Dbxref=GenBank:WP_022648085.1;Name=WP_022648085.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383995.1;locus_tag=VMS06_RS11215;product=ABC transporter substrate-binding protein;protein_id=WP_022648085.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 142338 143012 . + . ID=gene-VMS06_RS11220;Name=VMS06_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11220 NZ_JAVXZI010000008.1 Protein Homology CDS 142338 143012 . + 0 ID=cds-WP_022648086.1;Parent=gene-VMS06_RS11220;Dbxref=GenBank:WP_022648086.1;Name=WP_022648086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006175214.1;locus_tag=VMS06_RS11220;product=DUF3313 domain-containing protein;protein_id=WP_022648086.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 143047 143943 . - . ID=gene-VMS06_RS11225;Name=VMS06_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11225 NZ_JAVXZI010000008.1 Protein Homology CDS 143047 143943 . - 0 ID=cds-WP_063147342.1;Parent=gene-VMS06_RS11225;Dbxref=GenBank:WP_063147342.1;Name=WP_063147342.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831885.1;locus_tag=VMS06_RS11225;product=DMT family transporter;protein_id=WP_063147342.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 144118 144990 . + . ID=gene-VMS06_RS11230;Name=VMS06_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11230 NZ_JAVXZI010000008.1 Protein Homology CDS 144118 144990 . + 0 ID=cds-WP_023300082.1;Parent=gene-VMS06_RS11230;Dbxref=GenBank:WP_023300082.1;Name=WP_023300082.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070254.1;locus_tag=VMS06_RS11230;product=helix-turn-helix domain-containing protein;protein_id=WP_023300082.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 144970 146136 . - . ID=gene-VMS06_RS11235;Name=VMS06_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11235 NZ_JAVXZI010000008.1 Protein Homology CDS 144970 146136 . - 0 ID=cds-WP_063147341.1;Parent=gene-VMS06_RS11235;Dbxref=GenBank:WP_063147341.1;Name=WP_063147341.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810607.1;locus_tag=VMS06_RS11235;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_063147341.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 146229 146756 . + . ID=gene-VMS06_RS11240;Name=VMS06_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11240 NZ_JAVXZI010000008.1 Protein Homology CDS 146229 146756 . + 0 ID=cds-WP_032624275.1;Parent=gene-VMS06_RS11240;Dbxref=GenBank:WP_032624275.1;Name=WP_032624275.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170026.1;locus_tag=VMS06_RS11240;product=helix-turn-helix domain-containing protein;protein_id=WP_032624275.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 146837 148801 . + . ID=gene-VMS06_RS11245;Name=VMS06_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11245 NZ_JAVXZI010000008.1 Protein Homology CDS 146837 148801 . + 0 ID=cds-WP_045622761.1;Parent=gene-VMS06_RS11245;Dbxref=GenBank:WP_045622761.1;Name=WP_045622761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810609.1;locus_tag=VMS06_RS11245;product=peptidase U32 family protein;protein_id=WP_045622761.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 148798 149031 . - . ID=gene-VMS06_RS11250;Name=VMS06_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11250 NZ_JAVXZI010000008.1 Protein Homology CDS 148798 149031 . - 0 ID=cds-WP_023300086.1;Parent=gene-VMS06_RS11250;Dbxref=GenBank:WP_023300086.1;Name=WP_023300086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857211.1;locus_tag=VMS06_RS11250;product=DUF2554 family protein;protein_id=WP_023300086.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 149274 149636 . + . ID=gene-VMS06_RS11255;Name=VMS06_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11255 NZ_JAVXZI010000008.1 Protein Homology CDS 149274 149636 . + 0 ID=cds-WP_063147340.1;Parent=gene-VMS06_RS11255;Dbxref=GenBank:WP_063147340.1;Name=WP_063147340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000721089.1;locus_tag=VMS06_RS11255;product=hypothetical protein;protein_id=WP_063147340.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 149785 150783 . - . ID=gene-VMS06_RS11260;Name=ftrA;gbkey=Gene;gene=ftrA;gene_biotype=protein_coding;locus_tag=VMS06_RS11260 NZ_JAVXZI010000008.1 Protein Homology CDS 149785 150783 . - 0 ID=cds-WP_032624271.1;Parent=gene-VMS06_RS11260;Dbxref=GenBank:WP_032624271.1;Name=WP_032624271.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ftrA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857207.1;locus_tag=VMS06_RS11260;product=transcriptional regulator FtrA;protein_id=WP_032624271.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 150857 151267 . + . ID=gene-VMS06_RS11265;Name=VMS06_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11265 NZ_JAVXZI010000008.1 Protein Homology CDS 150857 151267 . + 0 ID=cds-WP_023306182.1;Parent=gene-VMS06_RS11265;Dbxref=GenBank:WP_023306182.1;Name=WP_023306182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857206.1;locus_tag=VMS06_RS11265;product=rhodanese-like domain-containing protein;protein_id=WP_023306182.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 151424 152527 . + . ID=gene-VMS06_RS11270;Name=VMS06_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11270 NZ_JAVXZI010000008.1 Protein Homology CDS 151424 152527 . + 0 ID=cds-WP_063147339.1;Parent=gene-VMS06_RS11270;Dbxref=GenBank:WP_063147339.1;Name=WP_063147339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226837.1;locus_tag=VMS06_RS11270;product=cobalamin-independent methionine synthase II family protein;protein_id=WP_063147339.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 152725 153996 . + . ID=gene-VMS06_RS11275;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=VMS06_RS11275 NZ_JAVXZI010000008.1 Protein Homology CDS 152725 153996 . + 0 ID=cds-WP_063147338.1;Parent=gene-VMS06_RS11275;Dbxref=GenBank:WP_063147338.1;Name=WP_063147338.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007900121.1;locus_tag=VMS06_RS11275;product=urea ABC transporter substrate-binding protein;protein_id=WP_063147338.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 154019 155593 . + . ID=gene-VMS06_RS11280;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=VMS06_RS11280 NZ_JAVXZI010000008.1 Protein Homology CDS 154019 155593 . + 0 ID=cds-WP_063147337.1;Parent=gene-VMS06_RS11280;Dbxref=GenBank:WP_063147337.1;Name=WP_063147337.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226839.1;locus_tag=VMS06_RS11280;product=urea ABC transporter permease subunit UrtB;protein_id=WP_063147337.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 155593 156666 . + . ID=gene-VMS06_RS11285;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=VMS06_RS11285 NZ_JAVXZI010000008.1 Protein Homology CDS 155593 156666 . + 0 ID=cds-WP_063147336.1;Parent=gene-VMS06_RS11285;Dbxref=GenBank:WP_063147336.1;Name=WP_063147336.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857195.1;locus_tag=VMS06_RS11285;product=urea ABC transporter permease subunit UrtC;protein_id=WP_063147336.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 156666 157463 . + . ID=gene-VMS06_RS11290;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=VMS06_RS11290 NZ_JAVXZI010000008.1 Protein Homology CDS 156666 157463 . + 0 ID=cds-WP_015570541.1;Parent=gene-VMS06_RS11290;Dbxref=GenBank:WP_015570541.1;Name=WP_015570541.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226841.1;locus_tag=VMS06_RS11290;product=urea ABC transporter ATP-binding protein UrtD;protein_id=WP_015570541.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 157473 158171 . + . ID=gene-VMS06_RS11295;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=VMS06_RS11295 NZ_JAVXZI010000008.1 Protein Homology CDS 157473 158171 . + 0 ID=cds-WP_023300094.1;Parent=gene-VMS06_RS11295;Dbxref=GenBank:WP_023300094.1;Name=WP_023300094.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122752.1;locus_tag=VMS06_RS11295;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_023300094.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 158224 158862 . + . ID=gene-VMS06_RS11300;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=VMS06_RS11300 NZ_JAVXZI010000008.1 Protein Homology CDS 158224 158862 . + 0 ID=cds-WP_023306187.1;Parent=gene-VMS06_RS11300;Dbxref=GenBank:WP_023306187.1;Name=WP_023306187.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431084.1;locus_tag=VMS06_RS11300;product=metal-binding protein ZinT;protein_id=WP_023306187.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 158909 160126 . - . ID=gene-VMS06_RS11305;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=VMS06_RS11305 NZ_JAVXZI010000008.1 Protein Homology CDS 158909 160126 . - 0 ID=cds-WP_063843855.1;Parent=gene-VMS06_RS11305;Dbxref=GenBank:WP_063843855.1;Name=WP_063843855.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383985.1;locus_tag=VMS06_RS11305;product=efflux MFS transporter YdeE;protein_id=WP_063843855.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 160320 161219 . + . ID=gene-VMS06_RS11310;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=VMS06_RS11310 NZ_JAVXZI010000008.1 Protein Homology CDS 160320 161219 . + 0 ID=cds-WP_023300097.1;Parent=gene-VMS06_RS11310;Dbxref=GenBank:WP_023300097.1;Name=WP_023300097.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857187.1;locus_tag=VMS06_RS11310;product=O-acetylserine/cysteine exporter;protein_id=WP_023300097.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 161258 161473 . - . ID=gene-VMS06_RS11315;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=VMS06_RS11315 NZ_JAVXZI010000008.1 Protein Homology CDS 161258 161473 . - 0 ID=cds-WP_023300098.1;Parent=gene-VMS06_RS11315;Dbxref=GenBank:WP_023300098.1;Name=WP_023300098.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857184.1;locus_tag=VMS06_RS11315;product=multiple antibiotic resistance protein MarB;protein_id=WP_023300098.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 161506 161886 . - . ID=gene-VMS06_RS11320;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=VMS06_RS11320 NZ_JAVXZI010000008.1 Protein Homology CDS 161506 161886 . - 0 ID=cds-WP_001303241.1;Parent=gene-VMS06_RS11320;Dbxref=GenBank:WP_001303241.1;Name=WP_001303241.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502237.1;locus_tag=VMS06_RS11320;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_001303241.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 161907 162341 . - . ID=gene-VMS06_RS11325;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=VMS06_RS11325 NZ_JAVXZI010000008.1 Protein Homology CDS 161907 162341 . - 0 ID=cds-WP_020884159.1;Parent=gene-VMS06_RS11325;Dbxref=GenBank:WP_020884159.1;Name=WP_020884159.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460480.1;locus_tag=VMS06_RS11325;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_020884159.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 162598 163263 . + . ID=gene-VMS06_RS11330;Name=VMS06_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11330 NZ_JAVXZI010000008.1 Protein Homology CDS 162598 163263 . + 0 ID=cds-WP_022648105.1;Parent=gene-VMS06_RS11330;Dbxref=GenBank:WP_022648105.1;Name=WP_022648105.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460481.1;locus_tag=VMS06_RS11330;product=MarC family NAAT transporter;protein_id=WP_022648105.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 163440 164282 . + . ID=gene-VMS06_RS11335;Name=VMS06_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11335 NZ_JAVXZI010000008.1 Protein Homology CDS 163440 164282 . + 0 ID=cds-WP_063137743.1;Parent=gene-VMS06_RS11335;Dbxref=GenBank:WP_063137743.1;Name=WP_063137743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570536.1;locus_tag=VMS06_RS11335;product=lysozyme inhibitor LprI family protein;protein_id=WP_063137743.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 164331 165527 . - . ID=gene-VMS06_RS11340;Name=VMS06_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11340 NZ_JAVXZI010000008.1 Protein Homology CDS 164331 165527 . - 0 ID=cds-WP_022648106.1;Parent=gene-VMS06_RS11340;Dbxref=GenBank:WP_022648106.1;Name=WP_022648106.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170046.1;locus_tag=VMS06_RS11340;product=sugar transporter;protein_id=WP_022648106.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 165704 166492 . + . ID=gene-VMS06_RS11345;Name=VMS06_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11345 NZ_JAVXZI010000008.1 Protein Homology CDS 165704 166492 . + 0 ID=cds-WP_063147335.1;Parent=gene-VMS06_RS11345;Dbxref=GenBank:WP_063147335.1;Name=WP_063147335.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857176.1;locus_tag=VMS06_RS11345;product=PhzF family phenazine biosynthesis protein;protein_id=WP_063147335.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 166515 167327 . + . ID=gene-VMS06_RS11350;Name=VMS06_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11350 NZ_JAVXZI010000008.1 Protein Homology CDS 166515 167327 . + 0 ID=cds-WP_063147334.1;Parent=gene-VMS06_RS11350;Dbxref=GenBank:WP_063147334.1;Name=WP_063147334.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382365.1;locus_tag=VMS06_RS11350;product=PhzF family phenazine biosynthesis protein;protein_id=WP_063147334.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 167390 167872 . + . ID=gene-VMS06_RS11355;Name=VMS06_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11355 NZ_JAVXZI010000008.1 Protein Homology CDS 167390 167872 . + 0 ID=cds-WP_032622224.1;Parent=gene-VMS06_RS11355;Dbxref=GenBank:WP_032622224.1;Name=WP_032622224.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004214810.1;locus_tag=VMS06_RS11355;product=GNAT family N-acetyltransferase;protein_id=WP_032622224.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 167826 168704 . - . ID=gene-VMS06_RS11360;Name=ptrR;gbkey=Gene;gene=ptrR;gene_biotype=protein_coding;locus_tag=VMS06_RS11360 NZ_JAVXZI010000008.1 Protein Homology CDS 167826 168704 . - 0 ID=cds-WP_022648110.1;Parent=gene-VMS06_RS11360;Dbxref=GenBank:WP_022648110.1;Name=WP_022648110.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptrR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226864.1;locus_tag=VMS06_RS11360;product=putrescine utilization regulator PtrR;protein_id=WP_022648110.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 168804 170186 . + . ID=gene-VMS06_RS11365;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=VMS06_RS11365 NZ_JAVXZI010000008.1 Protein Homology CDS 168804 170186 . + 0 ID=cds-WP_063147333.1;Parent=gene-VMS06_RS11365;Dbxref=GenBank:WP_063147333.1;Name=WP_063147333.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096612.1;locus_tag=VMS06_RS11365;product=succinate-semialdehyde dehydrogenase;protein_id=WP_063147333.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 170314 171903 . + . ID=gene-VMS06_RS11370;Name=VMS06_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11370 NZ_JAVXZI010000008.1 Protein Homology CDS 170314 171903 . + 0 ID=cds-WP_045308108.1;Parent=gene-VMS06_RS11370;Dbxref=GenBank:WP_045308108.1;Name=WP_045308108.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857168.1;locus_tag=VMS06_RS11370;product=methyl-accepting chemotaxis protein;protein_id=WP_045308108.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 171966 172892 . + . ID=gene-VMS06_RS11375;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=VMS06_RS11375 NZ_JAVXZI010000008.1 Protein Homology CDS 171966 172892 . + 0 ID=cds-WP_063147331.1;Parent=gene-VMS06_RS11375;Dbxref=GenBank:WP_063147331.1;Name=WP_063147331.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226866.1;locus_tag=VMS06_RS11375;product=glutaminase B;protein_id=WP_063147331.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 172892 173254 . + . ID=gene-VMS06_RS11380;Name=VMS06_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11380 NZ_JAVXZI010000008.1 Protein Homology CDS 172892 173254 . + 0 ID=cds-WP_022648114.1;Parent=gene-VMS06_RS11380;Dbxref=GenBank:WP_022648114.1;Name=WP_022648114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570528.1;locus_tag=VMS06_RS11380;product=DUF4186 domain-containing protein;protein_id=WP_022648114.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 173313 174278 . + . ID=gene-VMS06_RS11385;Name=VMS06_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11385 NZ_JAVXZI010000008.1 Protein Homology CDS 173313 174278 . + 0 ID=cds-WP_063147330.1;Parent=gene-VMS06_RS11385;Dbxref=GenBank:WP_063147330.1;Name=WP_063147330.1;Ontology_term=GO:0007165,GO:0005515,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=protein binding|0005515||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857161.1;locus_tag=VMS06_RS11385;product=sensor domain-containing diguanylate cyclase;protein_id=WP_063147330.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 174361 174888 . + . ID=gene-VMS06_RS11390;Name=VMS06_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11390 NZ_JAVXZI010000008.1 Protein Homology CDS 174361 174888 . + 0 ID=cds-WP_032624259.1;Parent=gene-VMS06_RS11390;Dbxref=GenBank:WP_032624259.1;Name=WP_032624259.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382360.1;locus_tag=VMS06_RS11390;product=GNAT family N-acetyltransferase;protein_id=WP_032624259.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 175005 176456 . + . ID=gene-VMS06_RS11395;Name=VMS06_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11395 NZ_JAVXZI010000008.1 Protein Homology CDS 175005 176456 . + 0 ID=cds-WP_045308111.1;Parent=gene-VMS06_RS11395;Dbxref=GenBank:WP_045308111.1;Name=WP_045308111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310155.1;locus_tag=VMS06_RS11395;product=tagaturonate reductase;protein_id=WP_045308111.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 176658 177572 . + . ID=gene-VMS06_RS11400;Name=VMS06_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11400 NZ_JAVXZI010000008.1 Protein Homology CDS 176658 177572 . + 0 ID=cds-WP_063147329.1;Parent=gene-VMS06_RS11400;Dbxref=GenBank:WP_063147329.1;Name=WP_063147329.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416037.2;locus_tag=VMS06_RS11400;product=bestrophin family protein;protein_id=WP_063147329.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 177560 178108 . - . ID=gene-VMS06_RS11405;Name=VMS06_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11405 NZ_JAVXZI010000008.1 Protein Homology CDS 177560 178108 . - 0 ID=cds-WP_063147328.1;Parent=gene-VMS06_RS11405;Dbxref=GenBank:WP_063147328.1;Name=WP_063147328.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857153.1;locus_tag=VMS06_RS11405;product=GNAT family N-acetyltransferase;protein_id=WP_063147328.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 178553 178885 . + . ID=gene-VMS06_RS11410;Name=VMS06_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11410 NZ_JAVXZI010000008.1 GeneMarkS-2+ CDS 178553 178885 . + 0 ID=cds-WP_023300105.1;Parent=gene-VMS06_RS11410;Dbxref=GenBank:WP_023300105.1;Name=WP_023300105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS11410;product=hypothetical protein;protein_id=WP_023300105.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 179552 180544 . + . ID=gene-VMS06_RS11415;Name=VMS06_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11415 NZ_JAVXZI010000008.1 Protein Homology CDS 179552 180544 . + 0 ID=cds-WP_232944530.1;Parent=gene-VMS06_RS11415;Dbxref=GenBank:WP_232944530.1;Name=WP_232944530.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016237244.1;locus_tag=VMS06_RS11415;product=HlyD family secretion protein;protein_id=WP_232944530.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 180544 182751 . + . ID=gene-VMS06_RS11420;Name=VMS06_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11420 NZ_JAVXZI010000008.1 Protein Homology CDS 180544 182751 . + 0 ID=cds-WP_017382355.1;Parent=gene-VMS06_RS11420;Dbxref=GenBank:WP_017382355.1;Name=WP_017382355.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382355.1;locus_tag=VMS06_RS11420;product=peptidase domain-containing ABC transporter;protein_id=WP_017382355.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 182763 182990 . + . ID=gene-VMS06_RS11425;Name=VMS06_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11425 NZ_JAVXZI010000008.1 Protein Homology CDS 182763 182990 . + 0 ID=cds-WP_257393663.1;Parent=gene-VMS06_RS11425;Dbxref=GenBank:WP_257393663.1;Name=WP_257393663.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503211.1;locus_tag=VMS06_RS11425;product=GNAT family N-acetyltransferase;protein_id=WP_257393663.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 183136 184131 . + . ID=gene-VMS06_RS11430;Name=VMS06_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11430 NZ_JAVXZI010000008.1 Protein Homology CDS 183136 184131 . + 0 ID=cds-WP_063147327.1;Parent=gene-VMS06_RS11430;Dbxref=GenBank:WP_063147327.1;Name=WP_063147327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883844.1;locus_tag=VMS06_RS11430;product=alpha/beta fold hydrolase;protein_id=WP_063147327.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq pseudogene 184176 184914 . + . ID=gene-VMS06_RS11435;Name=VMS06_RS11435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS11435;pseudo=true NZ_JAVXZI010000008.1 Protein Homology CDS 184176 184914 . + 0 ID=cds-VMS06_RS11435;Parent=gene-VMS06_RS11435;Note=frameshifted;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227061.1;locus_tag=VMS06_RS11435;product=response regulator;pseudo=true;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 184911 186206 . + . ID=gene-VMS06_RS11440;Name=VMS06_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11440 NZ_JAVXZI010000008.1 Protein Homology CDS 184911 186206 . + 0 ID=cds-WP_032624255.1;Parent=gene-VMS06_RS11440;Dbxref=GenBank:WP_032624255.1;Name=WP_032624255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810646.1;locus_tag=VMS06_RS11440;product=ATP-binding protein;protein_id=WP_032624255.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 186342 187532 . + . ID=gene-VMS06_RS11445;Name=VMS06_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11445 NZ_JAVXZI010000008.1 Protein Homology CDS 186342 187532 . + 0 ID=cds-WP_063147326.1;Parent=gene-VMS06_RS11445;Dbxref=GenBank:WP_063147326.1;Name=WP_063147326.1;Ontology_term=GO:0017004,GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884140.1;locus_tag=VMS06_RS11445;product=cytochrome c biogenesis protein/redoxin;protein_id=WP_063147326.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 187539 188297 . - . ID=gene-VMS06_RS11450;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=VMS06_RS11450 NZ_JAVXZI010000008.1 Protein Homology CDS 187539 188297 . - 0 ID=cds-WP_032624253.1;Parent=gene-VMS06_RS11450;Dbxref=GenBank:WP_032624253.1;Name=WP_032624253.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382350.1;locus_tag=VMS06_RS11450;product=trans-aconitate 2-methyltransferase;protein_id=WP_032624253.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 188382 188966 . - . ID=gene-VMS06_RS11455;Name=VMS06_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11455 NZ_JAVXZI010000008.1 Protein Homology CDS 188382 188966 . - 0 ID=cds-WP_063147325.1;Parent=gene-VMS06_RS11455;Dbxref=GenBank:WP_063147325.1;Name=WP_063147325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431172.1;locus_tag=VMS06_RS11455;product=NUDIX hydrolase;protein_id=WP_063147325.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 189053 189811 . + . ID=gene-VMS06_RS11460;Name=VMS06_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11460 NZ_JAVXZI010000008.1 Protein Homology CDS 189053 189811 . + 0 ID=cds-WP_063147324.1;Parent=gene-VMS06_RS11460;Dbxref=GenBank:WP_063147324.1;Name=WP_063147324.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810648.1;locus_tag=VMS06_RS11460;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_063147324.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 189916 191208 . + . ID=gene-VMS06_RS11465;Name=VMS06_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11465 NZ_JAVXZI010000008.1 Protein Homology CDS 189916 191208 . + 0 ID=cds-WP_063147323.1;Parent=gene-VMS06_RS11465;Dbxref=GenBank:WP_063147323.1;Name=WP_063147323.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382348.1;locus_tag=VMS06_RS11465;product=glycoside hydrolase family 28 protein;protein_id=WP_063147323.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 191505 192452 . - . ID=gene-VMS06_RS11470;Name=VMS06_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11470 NZ_JAVXZI010000008.1 Protein Homology CDS 191505 192452 . - 0 ID=cds-WP_323630660.1;Parent=gene-VMS06_RS11470;Dbxref=GenBank:WP_323630660.1;Name=WP_323630660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245990.1;locus_tag=VMS06_RS11470;product=hypothetical protein;protein_id=WP_323630660.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 193269 193628 . - . ID=gene-VMS06_RS11475;Name=VMS06_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11475 NZ_JAVXZI010000008.1 GeneMarkS-2+ CDS 193269 193628 . - 0 ID=cds-WP_023337307.1;Parent=gene-VMS06_RS11475;Dbxref=GenBank:WP_023337307.1;Name=WP_023337307.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS11475;product=hypothetical protein;protein_id=WP_023337307.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 193646 194584 . - . ID=gene-VMS06_RS11480;Name=VMS06_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11480 NZ_JAVXZI010000008.1 GeneMarkS-2+ CDS 193646 194584 . - 0 ID=cds-WP_023337308.1;Parent=gene-VMS06_RS11480;Dbxref=GenBank:WP_023337308.1;Name=WP_023337308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS11480;product=hypothetical protein;protein_id=WP_023337308.1;transl_table=11 NZ_JAVXZI010000008.1 RefSeq gene 194650 194855 . - . ID=gene-VMS06_RS11485;Name=VMS06_RS11485;end_range=194855,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11485;partial=true NZ_JAVXZI010000008.1 GeneMarkS-2+ CDS 194650 194855 . - 2 ID=cds-WP_323630661.1;Parent=gene-VMS06_RS11485;Dbxref=GenBank:WP_323630661.1;Name=WP_323630661.1;end_range=194855,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS11485;partial=true;product=hypothetical protein;protein_id=WP_323630661.1;transl_table=11 ##sequence-region NZ_JAVXZI010000009.1 1 185203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000009.1 RefSeq region 1 185203 . + . ID=NZ_JAVXZI010000009.1:1..185203;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000009.1 RefSeq gene 133 2148 . - . ID=gene-VMS06_RS11490;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=VMS06_RS11490 NZ_JAVXZI010000009.1 Protein Homology CDS 133 2148 . - 0 ID=cds-WP_003858519.1;Parent=gene-VMS06_RS11490;Dbxref=GenBank:WP_003858519.1;Name=WP_003858519.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=VMS06_RS11490;product=excinuclease ABC subunit UvrB;protein_id=WP_003858519.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 2897 3619 . + . ID=gene-VMS06_RS11495;Name=VMS06_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11495 NZ_JAVXZI010000009.1 Protein Homology CDS 2897 3619 . + 0 ID=cds-WP_022647498.1;Parent=gene-VMS06_RS11495;Dbxref=GenBank:WP_022647498.1;Name=WP_022647498.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858522.1;locus_tag=VMS06_RS11495;product=ABC transporter ATP-binding protein;protein_id=WP_022647498.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 3582 4283 . - . ID=gene-VMS06_RS11500;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=VMS06_RS11500 NZ_JAVXZI010000009.1 Protein Homology CDS 3582 4283 . - 0 ID=cds-WP_072200992.1;Parent=gene-VMS06_RS11500;Dbxref=GenBank:WP_072200992.1;Name=WP_072200992.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831144.1;locus_tag=VMS06_RS11500;product=dethiobiotin synthase;protein_id=WP_072200992.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 4276 5031 . - . ID=gene-VMS06_RS11505;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=VMS06_RS11505 NZ_JAVXZI010000009.1 Protein Homology CDS 4276 5031 . - 0 ID=cds-WP_063147991.1;Parent=gene-VMS06_RS11505;Dbxref=GenBank:WP_063147991.1;Name=WP_063147991.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384940.1;locus_tag=VMS06_RS11505;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_063147991.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 5015 6172 . - . ID=gene-VMS06_RS11510;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=VMS06_RS11510 NZ_JAVXZI010000009.1 Protein Homology CDS 5015 6172 . - 0 ID=cds-WP_063147992.1;Parent=gene-VMS06_RS11510;Dbxref=GenBank:WP_063147992.1;Name=WP_063147992.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858526.1;locus_tag=VMS06_RS11510;product=8-amino-7-oxononanoate synthase;protein_id=WP_063147992.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 6169 7209 . - . ID=gene-VMS06_RS11515;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=VMS06_RS11515 NZ_JAVXZI010000009.1 Protein Homology CDS 6169 7209 . - 0 ID=cds-WP_017384942.1;Parent=gene-VMS06_RS11515;Dbxref=GenBank:WP_017384942.1;Name=WP_017384942.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=VMS06_RS11515;product=biotin synthase BioB;protein_id=WP_017384942.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 7296 8585 . + . ID=gene-VMS06_RS11520;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=VMS06_RS11520 NZ_JAVXZI010000009.1 Protein Homology CDS 7296 8585 . + 0 ID=cds-WP_058677404.1;Parent=gene-VMS06_RS11520;Dbxref=GenBank:WP_058677404.1;Name=WP_058677404.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384943.1;locus_tag=VMS06_RS11520;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_058677404.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 8633 9109 . + . ID=gene-VMS06_RS11525;Name=VMS06_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11525 NZ_JAVXZI010000009.1 Protein Homology CDS 8633 9109 . + 0 ID=cds-WP_003858531.1;Parent=gene-VMS06_RS11525;Dbxref=GenBank:WP_003858531.1;Name=WP_003858531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308878.1;locus_tag=VMS06_RS11525;product=kinase inhibitor;protein_id=WP_003858531.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 9195 10715 . - . ID=gene-VMS06_RS11530;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=VMS06_RS11530 NZ_JAVXZI010000009.1 Protein Homology CDS 9195 10715 . - 0 ID=cds-WP_032624627.1;Parent=gene-VMS06_RS11530;Dbxref=GenBank:WP_032624627.1;Name=WP_032624627.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428807.1;locus_tag=VMS06_RS11530;product=histidine ammonia-lyase;protein_id=WP_032624627.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 10712 12400 . - . ID=gene-VMS06_RS11535;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=VMS06_RS11535 NZ_JAVXZI010000009.1 Protein Homology CDS 10712 12400 . - 0 ID=cds-WP_003858533.1;Parent=gene-VMS06_RS11535;Dbxref=GenBank:WP_003858533.1;Name=WP_003858533.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694119.1;locus_tag=VMS06_RS11535;product=urocanate hydratase;protein_id=WP_003858533.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 12528 13262 . - . ID=gene-VMS06_RS11540;Name=VMS06_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11540 NZ_JAVXZI010000009.1 Protein Homology CDS 12528 13262 . - 0 ID=cds-WP_022647491.1;Parent=gene-VMS06_RS11540;Dbxref=GenBank:WP_022647491.1;Name=WP_022647491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097507.1;locus_tag=VMS06_RS11540;product=histidine utilization repressor;protein_id=WP_022647491.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 13282 14220 . - . ID=gene-VMS06_RS11545;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=VMS06_RS11545 NZ_JAVXZI010000009.1 Protein Homology CDS 13282 14220 . - 0 ID=cds-WP_022647490.1;Parent=gene-VMS06_RS11545;Dbxref=GenBank:WP_022647490.1;Name=WP_022647490.1;Ontology_term=GO:0006548,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858535.1;locus_tag=VMS06_RS11545;product=formimidoylglutamase;protein_id=WP_022647490.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 14217 15440 . - . ID=gene-VMS06_RS11550;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=VMS06_RS11550 NZ_JAVXZI010000009.1 Protein Homology CDS 14217 15440 . - 0 ID=cds-WP_063147994.1;Parent=gene-VMS06_RS11550;Dbxref=GenBank:WP_063147994.1;Name=WP_063147994.1;Ontology_term=GO:0006548,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858536.1;locus_tag=VMS06_RS11550;product=imidazolonepropionase;protein_id=WP_063147994.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 15664 16947 . + . ID=gene-VMS06_RS11555;Name=VMS06_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11555 NZ_JAVXZI010000009.1 Protein Homology CDS 15664 16947 . + 0 ID=cds-WP_063147995.1;Parent=gene-VMS06_RS11555;Dbxref=GenBank:WP_063147995.1;Name=WP_063147995.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831133.1;locus_tag=VMS06_RS11555;product=putative acyl-CoA thioester hydrolase;protein_id=WP_063147995.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 17051 18046 . - . ID=gene-VMS06_RS11560;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=VMS06_RS11560 NZ_JAVXZI010000009.1 Protein Homology CDS 17051 18046 . - 0 ID=cds-WP_023305719.1;Parent=gene-VMS06_RS11560;Dbxref=GenBank:WP_023305719.1;Name=WP_023305719.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415288.1;locus_tag=VMS06_RS11560;product=6-phosphogluconolactonase;protein_id=WP_023305719.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 18166 18984 . + . ID=gene-VMS06_RS11565;Name=VMS06_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11565 NZ_JAVXZI010000009.1 Protein Homology CDS 18166 18984 . + 0 ID=cds-WP_022647486.1;Parent=gene-VMS06_RS11565;Dbxref=GenBank:WP_022647486.1;Name=WP_022647486.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459763.1;locus_tag=VMS06_RS11565;product=pyridoxal phosphatase;protein_id=WP_022647486.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 18985 20043 . - . ID=gene-VMS06_RS11570;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=VMS06_RS11570 NZ_JAVXZI010000009.1 Protein Homology CDS 18985 20043 . - 0 ID=cds-WP_017384950.1;Parent=gene-VMS06_RS11570;Dbxref=GenBank:WP_017384950.1;Name=WP_017384950.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459762.1;locus_tag=VMS06_RS11570;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_017384950.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 20043 20735 . - . ID=gene-VMS06_RS11575;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=VMS06_RS11575 NZ_JAVXZI010000009.1 Protein Homology CDS 20043 20735 . - 0 ID=cds-WP_045309132.1;Parent=gene-VMS06_RS11575;Dbxref=GenBank:WP_045309132.1;Name=WP_045309132.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571097.1;locus_tag=VMS06_RS11575;product=molybdate ABC transporter permease subunit;protein_id=WP_045309132.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 20732 21508 . - . ID=gene-VMS06_RS11580;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=VMS06_RS11580 NZ_JAVXZI010000009.1 Protein Homology CDS 20732 21508 . - 0 ID=cds-WP_023299624.1;Parent=gene-VMS06_RS11580;Dbxref=GenBank:WP_023299624.1;Name=WP_023299624.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831129.1;locus_tag=VMS06_RS11580;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_023299624.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 21690 21839 . - . ID=gene-VMS06_RS11585;Name=VMS06_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11585 NZ_JAVXZI010000009.1 Protein Homology CDS 21690 21839 . - 0 ID=cds-WP_063147996.1;Parent=gene-VMS06_RS11585;Dbxref=GenBank:WP_063147996.1;Name=WP_063147996.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501118.1;locus_tag=VMS06_RS11585;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_063147996.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 21967 22755 . + . ID=gene-VMS06_RS11590;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=VMS06_RS11590 NZ_JAVXZI010000009.1 Protein Homology CDS 21967 22755 . + 0 ID=cds-WP_022647484.1;Parent=gene-VMS06_RS11590;Dbxref=GenBank:WP_022647484.1;Name=WP_022647484.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308816.1;locus_tag=VMS06_RS11590;product=molybdenum-dependent transcriptional regulator;protein_id=WP_022647484.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 22823 24295 . + . ID=gene-VMS06_RS11595;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=VMS06_RS11595 NZ_JAVXZI010000009.1 Protein Homology CDS 22823 24295 . + 0 ID=cds-WP_022647483.1;Parent=gene-VMS06_RS11595;Dbxref=GenBank:WP_022647483.1;Name=WP_022647483.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169200.1;locus_tag=VMS06_RS11595;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_022647483.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 24497 25513 . + . ID=gene-VMS06_RS11600;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=VMS06_RS11600 NZ_JAVXZI010000009.1 Protein Homology CDS 24497 25513 . + 0 ID=cds-WP_063147997.1;Parent=gene-VMS06_RS11600;Dbxref=GenBank:WP_063147997.1;Name=WP_063147997.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308814.3;locus_tag=VMS06_RS11600;product=UDP-glucose 4-epimerase GalE;protein_id=WP_063147997.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 25523 26569 . + . ID=gene-VMS06_RS11605;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=VMS06_RS11605 NZ_JAVXZI010000009.1 Protein Homology CDS 25523 26569 . + 0 ID=cds-WP_063147998.1;Parent=gene-VMS06_RS11605;Dbxref=GenBank:WP_063147998.1;Name=WP_063147998.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415279.1;locus_tag=VMS06_RS11605;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_063147998.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 26572 27720 . + . ID=gene-VMS06_RS11610;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=VMS06_RS11610 NZ_JAVXZI010000009.1 Protein Homology CDS 26572 27720 . + 0 ID=cds-WP_032621676.1;Parent=gene-VMS06_RS11610;Dbxref=GenBank:WP_032621676.1;Name=WP_032621676.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=VMS06_RS11610;product=galactokinase;protein_id=WP_032621676.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 27714 28757 . + . ID=gene-VMS06_RS11615;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=VMS06_RS11615 NZ_JAVXZI010000009.1 Protein Homology CDS 27714 28757 . + 0 ID=cds-WP_023299620.1;Parent=gene-VMS06_RS11615;Dbxref=GenBank:WP_023299620.1;Name=WP_023299620.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694129.1;locus_tag=VMS06_RS11615;product=galactose-1-epimerase;protein_id=WP_023299620.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 29031 29783 . + . ID=gene-VMS06_RS11620;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=VMS06_RS11620 NZ_JAVXZI010000009.1 Protein Homology CDS 29031 29783 . + 0 ID=cds-WP_003858562.1;Parent=gene-VMS06_RS11620;Dbxref=GenBank:WP_003858562.1;Name=WP_003858562.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=VMS06_RS11620;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_003858562.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 29845 30897 . - . ID=gene-VMS06_RS11625;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=VMS06_RS11625 NZ_JAVXZI010000009.1 Protein Homology CDS 29845 30897 . - 0 ID=cds-WP_022647478.1;Parent=gene-VMS06_RS11625;Dbxref=GenBank:WP_022647478.1;Name=WP_022647478.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=VMS06_RS11625;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_022647478.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 31202 31561 . + . ID=gene-VMS06_RS11630;Name=VMS06_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11630 NZ_JAVXZI010000009.1 Protein Homology CDS 31202 31561 . + 0 ID=cds-WP_022647477.1;Parent=gene-VMS06_RS11630;Dbxref=GenBank:WP_022647477.1;Name=WP_022647477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000784351.1;locus_tag=VMS06_RS11630;product=protein YbgS;protein_id=WP_022647477.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 31661 32599 . + . ID=gene-VMS06_RS11635;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=VMS06_RS11635 NZ_JAVXZI010000009.1 Protein Homology CDS 31661 32599 . + 0 ID=cds-WP_022647476.1;Parent=gene-VMS06_RS11635;Dbxref=GenBank:WP_022647476.1;Name=WP_022647476.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225888.1;locus_tag=VMS06_RS11635;product=CDF family zinc transporter ZitB;protein_id=WP_022647476.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 32596 33315 . - . ID=gene-VMS06_RS11640;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=VMS06_RS11640 NZ_JAVXZI010000009.1 Protein Homology CDS 32596 33315 . - 0 ID=cds-WP_045621771.1;Parent=gene-VMS06_RS11640;Dbxref=GenBank:WP_045621771.1;Name=WP_045621771.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308806.1;locus_tag=VMS06_RS11640;product=nicotinamide riboside transporter PnuC;protein_id=WP_045621771.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 33338 34381 . - . ID=gene-VMS06_RS11645;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=VMS06_RS11645 NZ_JAVXZI010000009.1 Protein Homology CDS 33338 34381 . - 0 ID=cds-WP_063147999.1;Parent=gene-VMS06_RS11645;Dbxref=GenBank:WP_063147999.1;Name=WP_063147999.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858573.1;locus_tag=VMS06_RS11645;product=quinolinate synthase NadA;protein_id=WP_063147999.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 34712 34787 . - . ID=gene-VMS06_RS11650;Name=VMS06_RS11650;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS11650 NZ_JAVXZI010000009.1 tRNAscan-SE tRNA 34712 34787 . - . ID=rna-VMS06_RS11650;Parent=gene-VMS06_RS11650;anticodon=(pos:complement(34752..34754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11650;product=tRNA-Lys NZ_JAVXZI010000009.1 tRNAscan-SE exon 34712 34787 . - . ID=exon-VMS06_RS11650-1;Parent=rna-VMS06_RS11650;anticodon=(pos:complement(34752..34754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11650;product=tRNA-Lys NZ_JAVXZI010000009.1 RefSeq gene 34819 34894 . - . ID=gene-VMS06_RS11655;Name=VMS06_RS11655;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS11655 NZ_JAVXZI010000009.1 tRNAscan-SE tRNA 34819 34894 . - . ID=rna-VMS06_RS11655;Parent=gene-VMS06_RS11655;anticodon=(pos:complement(34859..34861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11655;product=tRNA-Lys NZ_JAVXZI010000009.1 tRNAscan-SE exon 34819 34894 . - . ID=exon-VMS06_RS11655-1;Parent=rna-VMS06_RS11655;anticodon=(pos:complement(34859..34861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11655;product=tRNA-Lys NZ_JAVXZI010000009.1 RefSeq gene 34936 35011 . - . ID=gene-VMS06_RS11660;Name=VMS06_RS11660;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS11660 NZ_JAVXZI010000009.1 tRNAscan-SE tRNA 34936 35011 . - . ID=rna-VMS06_RS11660;Parent=gene-VMS06_RS11660;anticodon=(pos:complement(34976..34978));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11660;product=tRNA-Lys NZ_JAVXZI010000009.1 tRNAscan-SE exon 34936 35011 . - . ID=exon-VMS06_RS11660-1;Parent=rna-VMS06_RS11660;anticodon=(pos:complement(34976..34978));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11660;product=tRNA-Lys NZ_JAVXZI010000009.1 RefSeq gene 35015 35090 . - . ID=gene-VMS06_RS11665;Name=VMS06_RS11665;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS11665 NZ_JAVXZI010000009.1 tRNAscan-SE tRNA 35015 35090 . - . ID=rna-VMS06_RS11665;Parent=gene-VMS06_RS11665;anticodon=(pos:complement(35055..35057));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11665;product=tRNA-Val NZ_JAVXZI010000009.1 tRNAscan-SE exon 35015 35090 . - . ID=exon-VMS06_RS11665-1;Parent=rna-VMS06_RS11665;anticodon=(pos:complement(35055..35057));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11665;product=tRNA-Val NZ_JAVXZI010000009.1 RefSeq gene 35118 35193 . - . ID=gene-VMS06_RS11670;Name=VMS06_RS11670;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS11670 NZ_JAVXZI010000009.1 tRNAscan-SE tRNA 35118 35193 . - . ID=rna-VMS06_RS11670;Parent=gene-VMS06_RS11670;anticodon=(pos:complement(35158..35160));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11670;product=tRNA-Lys NZ_JAVXZI010000009.1 tRNAscan-SE exon 35118 35193 . - . ID=exon-VMS06_RS11670-1;Parent=rna-VMS06_RS11670;anticodon=(pos:complement(35158..35160));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11670;product=tRNA-Lys NZ_JAVXZI010000009.1 RefSeq gene 35355 36143 . - . ID=gene-VMS06_RS11675;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=VMS06_RS11675 NZ_JAVXZI010000009.1 Protein Homology CDS 35355 36143 . - 0 ID=cds-WP_003858574.1;Parent=gene-VMS06_RS11675;Dbxref=GenBank:WP_003858574.1;Name=WP_003858574.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858574.1;locus_tag=VMS06_RS11675;product=cell division protein CpoB;protein_id=WP_003858574.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 36153 36674 . - . ID=gene-VMS06_RS11680;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=VMS06_RS11680 NZ_JAVXZI010000009.1 Protein Homology CDS 36153 36674 . - 0 ID=cds-WP_003858578.1;Parent=gene-VMS06_RS11680;Dbxref=GenBank:WP_003858578.1;Name=WP_003858578.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225883.1;locus_tag=VMS06_RS11680;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_003858578.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 36709 38001 . - . ID=gene-VMS06_RS11685;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=VMS06_RS11685 NZ_JAVXZI010000009.1 Protein Homology CDS 36709 38001 . - 0 ID=cds-WP_022647472.1;Parent=gene-VMS06_RS11685;Dbxref=GenBank:WP_022647472.1;Name=WP_022647472.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=VMS06_RS11685;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_022647472.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 38131 39402 . - . ID=gene-VMS06_RS11690;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=VMS06_RS11690 NZ_JAVXZI010000009.1 Protein Homology CDS 38131 39402 . - 0 ID=cds-WP_063148000.1;Parent=gene-VMS06_RS11690;Dbxref=GenBank:WP_063148000.1;Name=WP_063148000.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022980.1;locus_tag=VMS06_RS11690;product=cell envelope integrity protein TolA;protein_id=WP_063148000.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 39431 39859 . - . ID=gene-VMS06_RS11695;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=VMS06_RS11695 NZ_JAVXZI010000009.1 Protein Homology CDS 39431 39859 . - 0 ID=cds-WP_003858589.1;Parent=gene-VMS06_RS11695;Dbxref=GenBank:WP_003858589.1;Name=WP_003858589.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=VMS06_RS11695;product=colicin uptake protein TolR;protein_id=WP_003858589.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 39863 40555 . - . ID=gene-VMS06_RS11700;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=VMS06_RS11700 NZ_JAVXZI010000009.1 Protein Homology CDS 39863 40555 . - 0 ID=cds-WP_022647470.1;Parent=gene-VMS06_RS11700;Dbxref=GenBank:WP_022647470.1;Name=WP_022647470.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308799.1;locus_tag=VMS06_RS11700;product=Tol-Pal system protein TolQ;protein_id=WP_022647470.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 40552 40956 . - . ID=gene-VMS06_RS11705;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=VMS06_RS11705 NZ_JAVXZI010000009.1 Protein Homology CDS 40552 40956 . - 0 ID=cds-WP_003858593.1;Parent=gene-VMS06_RS11705;Dbxref=GenBank:WP_003858593.1;Name=WP_003858593.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=VMS06_RS11705;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_003858593.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 41105 41395 . - . ID=gene-VMS06_RS11710;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=VMS06_RS11710 NZ_JAVXZI010000009.1 Protein Homology CDS 41105 41395 . - 0 ID=cds-WP_003858596.1;Parent=gene-VMS06_RS11710;Dbxref=GenBank:WP_003858596.1;Name=WP_003858596.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225877.1;locus_tag=VMS06_RS11710;product=cyd operon protein YbgE;protein_id=WP_003858596.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 41395 41508 . - . ID=gene-VMS06_RS11715;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=VMS06_RS11715 NZ_JAVXZI010000009.1 Protein Homology CDS 41395 41508 . - 0 ID=cds-WP_014169181.1;Parent=gene-VMS06_RS11715;Dbxref=GenBank:WP_014169181.1;Name=WP_014169181.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456153.1;locus_tag=VMS06_RS11715;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_014169181.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 41523 42662 . - . ID=gene-VMS06_RS11720;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=VMS06_RS11720 NZ_JAVXZI010000009.1 Protein Homology CDS 41523 42662 . - 0 ID=cds-WP_022647469.1;Parent=gene-VMS06_RS11720;Dbxref=GenBank:WP_022647469.1;Name=WP_022647469.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=VMS06_RS11720;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_022647469.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 42678 44246 . - . ID=gene-VMS06_RS11725;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=VMS06_RS11725 NZ_JAVXZI010000009.1 Protein Homology CDS 42678 44246 . - 0 ID=cds-WP_023299615.1;Parent=gene-VMS06_RS11725;Dbxref=GenBank:WP_023299615.1;Name=WP_023299615.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225874.1;locus_tag=VMS06_RS11725;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_023299615.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 44928 47564 . - . ID=gene-VMS06_RS11730;Name=mngB;gbkey=Gene;gene=mngB;gene_biotype=protein_coding;locus_tag=VMS06_RS11730 NZ_JAVXZI010000009.1 Protein Homology CDS 44928 47564 . - 0 ID=cds-WP_063148001.1;Parent=gene-VMS06_RS11730;Dbxref=GenBank:WP_063148001.1;Name=WP_063148001.1;Ontology_term=GO:0006013,GO:0004559;gbkey=CDS;gene=mngB;go_function=alpha-mannosidase activity|0004559||IEA;go_process=mannose metabolic process|0006013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858603.1;locus_tag=VMS06_RS11730;product=mannosylglycerate hydrolase;protein_id=WP_063148001.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 47588 49504 . - . ID=gene-VMS06_RS11735;Name=mngA;gbkey=Gene;gene=mngA;gene_biotype=protein_coding;locus_tag=VMS06_RS11735 NZ_JAVXZI010000009.1 Protein Homology CDS 47588 49504 . - 0 ID=cds-WP_063148002.1;Parent=gene-VMS06_RS11735;Dbxref=GenBank:WP_063148002.1;Name=WP_063148002.1;Ontology_term=GO:0009401,GO:0005351,GO:0022877,GO:0016020;gbkey=CDS;gene=mngA;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694136.1;locus_tag=VMS06_RS11735;product=PTS 2-O-a-mannosyl-D-glycerate transporter subunit IIABC;protein_id=WP_063148002.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 49676 50392 . + . ID=gene-VMS06_RS11740;Name=VMS06_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11740 NZ_JAVXZI010000009.1 Protein Homology CDS 49676 50392 . + 0 ID=cds-WP_063148003.1;Parent=gene-VMS06_RS11740;Dbxref=GenBank:WP_063148003.1;Name=WP_063148003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858607.1;locus_tag=VMS06_RS11740;product=GntR family transcriptional regulator;protein_id=WP_063148003.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 50479 51348 . - . ID=gene-VMS06_RS11745;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=VMS06_RS11745 NZ_JAVXZI010000009.1 Protein Homology CDS 50479 51348 . - 0 ID=cds-WP_006809578.1;Parent=gene-VMS06_RS11745;Dbxref=GenBank:WP_006809578.1;Name=WP_006809578.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=VMS06_RS11745;product=succinate--CoA ligase subunit alpha;protein_id=WP_006809578.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 51348 52514 . - . ID=gene-VMS06_RS11750;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=VMS06_RS11750 NZ_JAVXZI010000009.1 Protein Homology CDS 51348 52514 . - 0 ID=cds-WP_022647464.1;Parent=gene-VMS06_RS11750;Dbxref=GenBank:WP_022647464.1;Name=WP_022647464.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=VMS06_RS11750;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_022647464.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 52611 53837 . - . ID=gene-VMS06_RS11755;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=VMS06_RS11755 NZ_JAVXZI010000009.1 Protein Homology CDS 52611 53837 . - 0 ID=cds-WP_023299612.1;Parent=gene-VMS06_RS11755;Dbxref=GenBank:WP_023299612.1;Name=WP_023299612.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308779.1;locus_tag=VMS06_RS11755;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_023299612.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 53852 56659 . - . ID=gene-VMS06_RS11760;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=VMS06_RS11760 NZ_JAVXZI010000009.1 Protein Homology CDS 53852 56659 . - 0 ID=cds-WP_022647462.1;Parent=gene-VMS06_RS11760;Dbxref=GenBank:WP_022647462.1;Name=WP_022647462.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225869.1;locus_tag=VMS06_RS11760;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_022647462.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 56898 57614 . - . ID=gene-VMS06_RS11765;Name=VMS06_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11765 NZ_JAVXZI010000009.1 Protein Homology CDS 56898 57614 . - 0 ID=cds-WP_022647461.1;Parent=gene-VMS06_RS11765;Dbxref=GenBank:WP_022647461.1;Name=WP_022647461.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=VMS06_RS11765;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_022647461.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 57630 59396 . - . ID=gene-VMS06_RS11770;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=VMS06_RS11770 NZ_JAVXZI010000009.1 Protein Homology CDS 57630 59396 . - 0 ID=cds-WP_023299611.1;Parent=gene-VMS06_RS11770;Dbxref=GenBank:WP_023299611.1;Name=WP_023299611.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=VMS06_RS11770;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_023299611.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 59396 59743 . - . ID=gene-VMS06_RS11775;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=VMS06_RS11775 NZ_JAVXZI010000009.1 Protein Homology CDS 59396 59743 . - 0 ID=cds-WP_003858621.1;Parent=gene-VMS06_RS11775;Dbxref=GenBank:WP_003858621.1;Name=WP_003858621.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415250.1;locus_tag=VMS06_RS11775;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_003858621.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 59737 60141 . - . ID=gene-VMS06_RS11780;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=VMS06_RS11780 NZ_JAVXZI010000009.1 Protein Homology CDS 59737 60141 . - 0 ID=cds-WP_026080740.1;Parent=gene-VMS06_RS11780;Dbxref=GenBank:WP_026080740.1;Name=WP_026080740.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=VMS06_RS11780;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_026080740.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 60781 62064 . + . ID=gene-VMS06_RS11785;Name=VMS06_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11785 NZ_JAVXZI010000009.1 Protein Homology CDS 60781 62064 . + 0 ID=cds-WP_006809584.1;Parent=gene-VMS06_RS11785;Dbxref=GenBank:WP_006809584.1;Name=WP_006809584.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415248.1;locus_tag=VMS06_RS11785;product=citrate synthase;protein_id=WP_006809584.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 62149 62940 . - . ID=gene-VMS06_RS11790;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=VMS06_RS11790 NZ_JAVXZI010000009.1 Protein Homology CDS 62149 62940 . - 0 ID=cds-WP_063146880.1;Parent=gene-VMS06_RS11790;Dbxref=GenBank:WP_063146880.1;Name=WP_063146880.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571114.1;locus_tag=VMS06_RS11790;product=endonuclease VIII;protein_id=WP_063146880.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 62959 63699 . - . ID=gene-VMS06_RS11795;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=VMS06_RS11795 NZ_JAVXZI010000009.1 Protein Homology CDS 62959 63699 . - 0 ID=cds-WP_063148004.1;Parent=gene-VMS06_RS11795;Dbxref=GenBank:WP_063148004.1;Name=WP_063148004.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384972.1;locus_tag=VMS06_RS11795;product=5-oxoprolinase subunit PxpA;protein_id=WP_063148004.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 63686 64618 . - . ID=gene-VMS06_RS11800;Name=pxpC;gbkey=Gene;gene=pxpC;gene_biotype=protein_coding;locus_tag=VMS06_RS11800 NZ_JAVXZI010000009.1 Protein Homology CDS 63686 64618 . - 0 ID=cds-WP_022647458.1;Parent=gene-VMS06_RS11800;Dbxref=GenBank:WP_022647458.1;Name=WP_022647458.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpC;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308764.1;locus_tag=VMS06_RS11800;product=5-oxoprolinase subunit PxpC;protein_id=WP_022647458.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 64612 65268 . - . ID=gene-VMS06_RS11805;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=VMS06_RS11805 NZ_JAVXZI010000009.1 Protein Homology CDS 64612 65268 . - 0 ID=cds-WP_022647457.1;Parent=gene-VMS06_RS11805;Dbxref=GenBank:WP_022647457.1;Name=WP_022647457.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308763.1;locus_tag=VMS06_RS11805;product=5-oxoprolinase subunit PxpB;protein_id=WP_022647457.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 65283 66026 . - . ID=gene-VMS06_RS11810;Name=VMS06_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11810 NZ_JAVXZI010000009.1 Protein Homology CDS 65283 66026 . - 0 ID=cds-WP_003858635.1;Parent=gene-VMS06_RS11810;Dbxref=GenBank:WP_003858635.1;Name=WP_003858635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=VMS06_RS11810;product=type 2 GTP cyclohydrolase I;protein_id=WP_003858635.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 66037 67449 . - . ID=gene-VMS06_RS11815;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=VMS06_RS11815 NZ_JAVXZI010000009.1 Protein Homology CDS 66037 67449 . - 0 ID=cds-WP_063148005.1;Parent=gene-VMS06_RS11815;Dbxref=GenBank:WP_063148005.1;Name=WP_063148005.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694142.1;locus_tag=VMS06_RS11815;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_063148005.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 68048 68254 . - . ID=gene-VMS06_RS11820;Name=VMS06_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11820 NZ_JAVXZI010000009.1 Protein Homology CDS 68048 68254 . - 0 ID=cds-WP_014069366.1;Parent=gene-VMS06_RS11820;Dbxref=GenBank:WP_014069366.1;Name=WP_014069366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459693.1;locus_tag=VMS06_RS11820;product=YbfA family protein;protein_id=WP_014069366.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 68565 68654 . + . ID=gene-VMS06_RS11825;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=VMS06_RS11825 NZ_JAVXZI010000009.1 Protein Homology CDS 68565 68654 . + 0 ID=cds-WP_100148835.1;Parent=gene-VMS06_RS11825;Dbxref=GenBank:WP_100148835.1;Name=WP_100148835.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459692.1;locus_tag=VMS06_RS11825;product=K(+)-transporting ATPase subunit F;protein_id=WP_100148835.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 68654 70333 . + . ID=gene-VMS06_RS11830;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=VMS06_RS11830 NZ_JAVXZI010000009.1 Protein Homology CDS 68654 70333 . + 0 ID=cds-WP_063148007.1;Parent=gene-VMS06_RS11830;Dbxref=GenBank:WP_063148007.1;Name=WP_063148007.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858639.1;locus_tag=VMS06_RS11830;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_063148007.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 70352 72400 . + . ID=gene-VMS06_RS11835;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=VMS06_RS11835 NZ_JAVXZI010000009.1 Protein Homology CDS 70352 72400 . + 0 ID=cds-WP_063148008.1;Parent=gene-VMS06_RS11835;Dbxref=GenBank:WP_063148008.1;Name=WP_063148008.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415225.1;locus_tag=VMS06_RS11835;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_063148008.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 72413 72988 . + . ID=gene-VMS06_RS11840;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=VMS06_RS11840 NZ_JAVXZI010000009.1 Protein Homology CDS 72413 72988 . + 0 ID=cds-WP_022647452.1;Parent=gene-VMS06_RS11840;Dbxref=GenBank:WP_022647452.1;Name=WP_022647452.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858641.1;locus_tag=VMS06_RS11840;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_022647452.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 72989 75676 . + . ID=gene-VMS06_RS11845;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=VMS06_RS11845 NZ_JAVXZI010000009.1 Protein Homology CDS 72989 75676 . + 0 ID=cds-WP_063148009.1;Parent=gene-VMS06_RS11845;Dbxref=GenBank:WP_063148009.1;Name=WP_063148009.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225847.1;locus_tag=VMS06_RS11845;product=two-component system sensor histidine kinase KdpD;protein_id=WP_063148009.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 75673 76350 . + . ID=gene-VMS06_RS11850;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=VMS06_RS11850 NZ_JAVXZI010000009.1 Protein Homology CDS 75673 76350 . + 0 ID=cds-WP_022647450.1;Parent=gene-VMS06_RS11850;Dbxref=GenBank:WP_022647450.1;Name=WP_022647450.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415222.1;locus_tag=VMS06_RS11850;product=two-component system response regulator KdpE;protein_id=WP_022647450.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 76628 76732 . + . ID=gene-VMS06_RS11855;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=VMS06_RS11855 NZ_JAVXZI010000009.1 Protein Homology CDS 76628 76732 . + 0 ID=cds-WP_003858645.1;Parent=gene-VMS06_RS11855;Dbxref=GenBank:WP_003858645.1;Name=WP_003858645.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051176.1;locus_tag=VMS06_RS11855;product=leader peptide SpeFL;protein_id=WP_003858645.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 76988 79186 . + . ID=gene-VMS06_RS11860;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=VMS06_RS11860 NZ_JAVXZI010000009.1 Protein Homology CDS 76988 79186 . + 0 ID=cds-WP_063148010.1;Parent=gene-VMS06_RS11860;Dbxref=GenBank:WP_063148010.1;Name=WP_063148010.1;Ontology_term=GO:0006520,GO:0004586;gbkey=CDS;gene=speF;go_function=ornithine decarboxylase activity|0004586||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459686.1;locus_tag=VMS06_RS11860;product=ornithine decarboxylase SpeF;protein_id=WP_063148010.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 79183 80496 . + . ID=gene-VMS06_RS11865;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=VMS06_RS11865 NZ_JAVXZI010000009.1 Protein Homology CDS 79183 80496 . + 0 ID=cds-WP_022647448.1;Parent=gene-VMS06_RS11865;Dbxref=GenBank:WP_022647448.1;Name=WP_022647448.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369854.1;locus_tag=VMS06_RS11865;product=putrescine-ornithine antiporter;protein_id=WP_022647448.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 80607 82247 . - . ID=gene-VMS06_RS11870;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=VMS06_RS11870 NZ_JAVXZI010000009.1 Protein Homology CDS 80607 82247 . - 0 ID=cds-WP_045621787.1;Parent=gene-VMS06_RS11870;Dbxref=GenBank:WP_045621787.1;Name=WP_045621787.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415214.1;locus_tag=VMS06_RS11870;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_045621787.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 82272 82817 . - . ID=gene-VMS06_RS11875;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=VMS06_RS11875 NZ_JAVXZI010000009.1 Protein Homology CDS 82272 82817 . - 0 ID=cds-WP_003858650.1;Parent=gene-VMS06_RS11875;Dbxref=GenBank:WP_003858650.1;Name=WP_003858650.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415213.1;locus_tag=VMS06_RS11875;product=replication initiation negative regulator SeqA;protein_id=WP_003858650.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 83001 83774 . + . ID=gene-VMS06_RS11880;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=VMS06_RS11880 NZ_JAVXZI010000009.1 Protein Homology CDS 83001 83774 . + 0 ID=cds-WP_022647446.1;Parent=gene-VMS06_RS11880;Dbxref=GenBank:WP_022647446.1;Name=WP_022647446.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858651.1;locus_tag=VMS06_RS11880;product=esterase;protein_id=WP_022647446.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 83903 84190 . + . ID=gene-VMS06_RS11885;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=VMS06_RS11885 NZ_JAVXZI010000009.1 Protein Homology CDS 83903 84190 . + 0 ID=cds-WP_003858652.1;Parent=gene-VMS06_RS11885;Dbxref=GenBank:WP_003858652.1;Name=WP_003858652.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022842.1;locus_tag=VMS06_RS11885;product=LexA regulated protein;protein_id=WP_003858652.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 84346 84876 . + . ID=gene-VMS06_RS11890;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=VMS06_RS11890 NZ_JAVXZI010000009.1 Protein Homology CDS 84346 84876 . + 0 ID=cds-WP_003858653.1;Parent=gene-VMS06_RS11890;Dbxref=GenBank:WP_003858653.1;Name=WP_003858653.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459679.1;locus_tag=VMS06_RS11890;product=flavodoxin FldA;protein_id=WP_003858653.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 85168 85614 . + . ID=gene-VMS06_RS11895;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=VMS06_RS11895 NZ_JAVXZI010000009.1 Protein Homology CDS 85168 85614 . + 0 ID=cds-WP_003858655.1;Parent=gene-VMS06_RS11895;Dbxref=GenBank:WP_003858655.1;Name=WP_003858655.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308741.1;locus_tag=VMS06_RS11895;product=ferric iron uptake transcriptional regulator;protein_id=WP_003858655.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 85707 86033 . - . ID=gene-VMS06_RS11900;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=VMS06_RS11900 NZ_JAVXZI010000009.1 Protein Homology CDS 85707 86033 . - 0 ID=cds-WP_023299602.1;Parent=gene-VMS06_RS11900;Dbxref=GenBank:WP_023299602.1;Name=WP_023299602.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858658.1;locus_tag=VMS06_RS11900;product=ChiQ/YbfN family lipoprotein;protein_id=WP_023299602.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 86081 87478 . - . ID=gene-VMS06_RS11905;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=VMS06_RS11905 NZ_JAVXZI010000009.1 Protein Homology CDS 86081 87478 . - 0 ID=cds-WP_323630662.1;Parent=gene-VMS06_RS11905;Dbxref=GenBank:WP_323630662.1;Name=WP_323630662.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225836.1;locus_tag=VMS06_RS11905;product=chitoporin ChiP;protein_id=WP_323630662.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 87926 89593 . - . ID=gene-VMS06_RS11915;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=VMS06_RS11915 NZ_JAVXZI010000009.1 Protein Homology CDS 87926 89593 . - 0 ID=cds-WP_015571127.1;Parent=gene-VMS06_RS11915;Dbxref=GenBank:WP_015571127.1;Name=WP_015571127.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459671.1;locus_tag=VMS06_RS11915;product=glutamine--tRNA ligase;protein_id=WP_015571127.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 89763 91712 . - . ID=gene-VMS06_RS11920;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=VMS06_RS11920 NZ_JAVXZI010000009.1 Protein Homology CDS 89763 91712 . - 0 ID=cds-WP_022647444.1;Parent=gene-VMS06_RS11920;Dbxref=GenBank:WP_022647444.1;Name=WP_022647444.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459670.1;locus_tag=VMS06_RS11920;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_022647444.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 92038 92838 . + . ID=gene-VMS06_RS11925;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=VMS06_RS11925 NZ_JAVXZI010000009.1 Protein Homology CDS 92038 92838 . + 0 ID=cds-WP_003858663.1;Parent=gene-VMS06_RS11925;Dbxref=GenBank:WP_003858663.1;Name=WP_003858663.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=VMS06_RS11925;product=glucosamine-6-phosphate deaminase;protein_id=WP_003858663.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 92893 94041 . + . ID=gene-VMS06_RS11930;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=VMS06_RS11930 NZ_JAVXZI010000009.1 Protein Homology CDS 92893 94041 . + 0 ID=cds-WP_023299598.1;Parent=gene-VMS06_RS11930;Dbxref=GenBank:WP_023299598.1;Name=WP_023299598.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308734.1;locus_tag=VMS06_RS11930;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_023299598.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 94050 95270 . + . ID=gene-VMS06_RS11935;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=VMS06_RS11935 NZ_JAVXZI010000009.1 Protein Homology CDS 94050 95270 . + 0 ID=cds-WP_022647442.1;Parent=gene-VMS06_RS11935;Dbxref=GenBank:WP_022647442.1;Name=WP_022647442.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459667.1;locus_tag=VMS06_RS11935;product=DNA-binding transcriptional regulator NagC;protein_id=WP_022647442.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 95316 96068 . + . ID=gene-VMS06_RS11940;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=VMS06_RS11940 NZ_JAVXZI010000009.1 Protein Homology CDS 95316 96068 . + 0 ID=cds-WP_003858667.1;Parent=gene-VMS06_RS11940;Dbxref=GenBank:WP_003858667.1;Name=WP_003858667.1;gbkey=CDS;gene=nagD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373873.1;locus_tag=VMS06_RS11940;product=ribonucleotide monophosphatase NagD;protein_id=WP_003858667.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 96319 97983 . + . ID=gene-VMS06_RS11945;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=VMS06_RS11945 NZ_JAVXZI010000009.1 Protein Homology CDS 96319 97983 . + 0 ID=cds-WP_015571128.1;Parent=gene-VMS06_RS11945;Dbxref=GenBank:WP_015571128.1;Name=WP_015571128.1;Ontology_term=GO:0070981,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=VMS06_RS11945;product=asparagine synthase B;protein_id=WP_015571128.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 98209 98285 . + . ID=gene-VMS06_RS11950;Name=VMS06_RS11950;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS11950 NZ_JAVXZI010000009.1 tRNAscan-SE tRNA 98209 98285 . + . ID=rna-VMS06_RS11950;Parent=gene-VMS06_RS11950;anticodon=(pos:98243..98245);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11950;product=tRNA-Met NZ_JAVXZI010000009.1 tRNAscan-SE exon 98209 98285 . + . ID=exon-VMS06_RS11950-1;Parent=rna-VMS06_RS11950;anticodon=(pos:98243..98245);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11950;product=tRNA-Met NZ_JAVXZI010000009.1 RefSeq gene 98294 98378 . + . ID=gene-VMS06_RS11955;Name=VMS06_RS11955;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS11955 NZ_JAVXZI010000009.1 tRNAscan-SE tRNA 98294 98378 . + . ID=rna-VMS06_RS11955;Parent=gene-VMS06_RS11955;anticodon=(pos:98328..98330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11955;product=tRNA-Leu NZ_JAVXZI010000009.1 tRNAscan-SE exon 98294 98378 . + . ID=exon-VMS06_RS11955-1;Parent=rna-VMS06_RS11955;anticodon=(pos:98328..98330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11955;product=tRNA-Leu NZ_JAVXZI010000009.1 RefSeq gene 98402 98476 . + . ID=gene-VMS06_RS11960;Name=VMS06_RS11960;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS11960 NZ_JAVXZI010000009.1 tRNAscan-SE tRNA 98402 98476 . + . ID=rna-VMS06_RS11960;Parent=gene-VMS06_RS11960;anticodon=(pos:98434..98436);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11960;product=tRNA-Gln NZ_JAVXZI010000009.1 tRNAscan-SE exon 98402 98476 . + . ID=exon-VMS06_RS11960-1;Parent=rna-VMS06_RS11960;anticodon=(pos:98434..98436);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11960;product=tRNA-Gln NZ_JAVXZI010000009.1 RefSeq gene 98509 98583 . + . ID=gene-VMS06_RS11965;Name=VMS06_RS11965;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS11965 NZ_JAVXZI010000009.1 tRNAscan-SE tRNA 98509 98583 . + . ID=rna-VMS06_RS11965;Parent=gene-VMS06_RS11965;anticodon=(pos:98541..98543);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11965;product=tRNA-Gln NZ_JAVXZI010000009.1 tRNAscan-SE exon 98509 98583 . + . ID=exon-VMS06_RS11965-1;Parent=rna-VMS06_RS11965;anticodon=(pos:98541..98543);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11965;product=tRNA-Gln NZ_JAVXZI010000009.1 RefSeq gene 98601 98677 . + . ID=gene-VMS06_RS11970;Name=VMS06_RS11970;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS11970 NZ_JAVXZI010000009.1 tRNAscan-SE tRNA 98601 98677 . + . ID=rna-VMS06_RS11970;Parent=gene-VMS06_RS11970;anticodon=(pos:98635..98637);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11970;product=tRNA-Met NZ_JAVXZI010000009.1 tRNAscan-SE exon 98601 98677 . + . ID=exon-VMS06_RS11970-1;Parent=rna-VMS06_RS11970;anticodon=(pos:98635..98637);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11970;product=tRNA-Met NZ_JAVXZI010000009.1 RefSeq gene 98719 98793 . + . ID=gene-VMS06_RS11975;Name=VMS06_RS11975;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS11975 NZ_JAVXZI010000009.1 tRNAscan-SE tRNA 98719 98793 . + . ID=rna-VMS06_RS11975;Parent=gene-VMS06_RS11975;anticodon=(pos:98751..98753);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11975;product=tRNA-Gln NZ_JAVXZI010000009.1 tRNAscan-SE exon 98719 98793 . + . ID=exon-VMS06_RS11975-1;Parent=rna-VMS06_RS11975;anticodon=(pos:98751..98753);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11975;product=tRNA-Gln NZ_JAVXZI010000009.1 RefSeq gene 98828 98902 . + . ID=gene-VMS06_RS11980;Name=VMS06_RS11980;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS11980 NZ_JAVXZI010000009.1 tRNAscan-SE tRNA 98828 98902 . + . ID=rna-VMS06_RS11980;Parent=gene-VMS06_RS11980;anticodon=(pos:98860..98862);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11980;product=tRNA-Gln NZ_JAVXZI010000009.1 tRNAscan-SE exon 98828 98902 . + . ID=exon-VMS06_RS11980-1;Parent=rna-VMS06_RS11980;anticodon=(pos:98860..98862);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS11980;product=tRNA-Gln NZ_JAVXZI010000009.1 RefSeq gene 99011 100186 . - . ID=gene-VMS06_RS11985;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=VMS06_RS11985 NZ_JAVXZI010000009.1 Protein Homology CDS 99011 100186 . - 0 ID=cds-WP_063843864.1;Parent=gene-VMS06_RS11985;Dbxref=GenBank:WP_063843864.1;Name=WP_063843864.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459663.1;locus_tag=VMS06_RS11985;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_063843864.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 100322 101746 . + . ID=gene-VMS06_RS11990;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=VMS06_RS11990 NZ_JAVXZI010000009.1 Protein Homology CDS 100322 101746 . + 0 ID=cds-WP_003858672.1;Parent=gene-VMS06_RS11990;Dbxref=GenBank:WP_003858672.1;Name=WP_003858672.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225826.1;locus_tag=VMS06_RS11990;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_003858672.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 101910 102956 . + . ID=gene-VMS06_RS11995;Name=VMS06_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS11995 NZ_JAVXZI010000009.1 Protein Homology CDS 101910 102956 . + 0 ID=cds-WP_003858674.1;Parent=gene-VMS06_RS11995;Dbxref=GenBank:WP_003858674.1;Name=WP_003858674.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=VMS06_RS11995;product=PhoH family protein;protein_id=WP_003858674.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 102953 103420 . + . ID=gene-VMS06_RS12000;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=VMS06_RS12000 NZ_JAVXZI010000009.1 Protein Homology CDS 102953 103420 . + 0 ID=cds-WP_003858677.1;Parent=gene-VMS06_RS12000;Dbxref=GenBank:WP_003858677.1;Name=WP_003858677.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169133.1;locus_tag=VMS06_RS12000;product=rRNA maturation RNase YbeY;protein_id=WP_003858677.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 103505 104383 . + . ID=gene-VMS06_RS12005;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=VMS06_RS12005 NZ_JAVXZI010000009.1 Protein Homology CDS 103505 104383 . + 0 ID=cds-WP_003858679.1;Parent=gene-VMS06_RS12005;Dbxref=GenBank:WP_003858679.1;Name=WP_003858679.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308723.1;locus_tag=VMS06_RS12005;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_003858679.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 104389 105927 . + . ID=gene-VMS06_RS12010;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=VMS06_RS12010 NZ_JAVXZI010000009.1 Protein Homology CDS 104389 105927 . + 0 ID=cds-WP_022647439.1;Parent=gene-VMS06_RS12010;Dbxref=GenBank:WP_022647439.1;Name=WP_022647439.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459658.1;locus_tag=VMS06_RS12010;product=apolipoprotein N-acyltransferase;protein_id=WP_022647439.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 106311 107216 . + . ID=gene-VMS06_RS12015;Name=VMS06_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12015 NZ_JAVXZI010000009.1 Protein Homology CDS 106311 107216 . + 0 ID=cds-WP_022647438.1;Parent=gene-VMS06_RS12015;Dbxref=GenBank:WP_022647438.1;Name=WP_022647438.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225821.1;locus_tag=VMS06_RS12015;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_022647438.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 107372 108112 . + . ID=gene-VMS06_RS12020;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=VMS06_RS12020 NZ_JAVXZI010000009.1 Protein Homology CDS 107372 108112 . + 0 ID=cds-WP_015571133.1;Parent=gene-VMS06_RS12020;Dbxref=GenBank:WP_015571133.1;Name=WP_015571133.1;gbkey=CDS;gene=gltJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415187.1;locus_tag=VMS06_RS12020;product=glutamate/aspartate ABC transporter permease GltJ;protein_id=WP_015571133.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 108112 108786 . + . ID=gene-VMS06_RS12025;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=VMS06_RS12025 NZ_JAVXZI010000009.1 Protein Homology CDS 108112 108786 . + 0 ID=cds-WP_022647437.1;Parent=gene-VMS06_RS12025;Dbxref=GenBank:WP_022647437.1;Name=WP_022647437.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225819.1;locus_tag=VMS06_RS12025;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_022647437.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 108786 109511 . + . ID=gene-VMS06_RS12030;Name=VMS06_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12030 NZ_JAVXZI010000009.1 Protein Homology CDS 108786 109511 . + 0 ID=cds-WP_006809622.1;Parent=gene-VMS06_RS12030;Dbxref=GenBank:WP_006809622.1;Name=WP_006809622.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=VMS06_RS12030;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_006809622.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 109631 110572 . + . ID=gene-VMS06_RS12035;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=VMS06_RS12035 NZ_JAVXZI010000009.1 Protein Homology CDS 109631 110572 . + 0 ID=cds-WP_063148013.1;Parent=gene-VMS06_RS12035;Dbxref=GenBank:WP_063148013.1;Name=WP_063148013.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694311.1;locus_tag=VMS06_RS12035;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_063148013.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 110641 111123 . - . ID=gene-VMS06_RS12040;Name=VMS06_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12040 NZ_JAVXZI010000009.1 Protein Homology CDS 110641 111123 . - 0 ID=cds-WP_032621827.1;Parent=gene-VMS06_RS12040;Dbxref=GenBank:WP_032621827.1;Name=WP_032621827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459645.1;locus_tag=VMS06_RS12040;product=zinc ribbon-containing protein;protein_id=WP_032621827.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 111338 113920 . + . ID=gene-VMS06_RS12045;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=VMS06_RS12045 NZ_JAVXZI010000009.1 Protein Homology CDS 111338 113920 . + 0 ID=cds-WP_015571136.1;Parent=gene-VMS06_RS12045;Dbxref=GenBank:WP_015571136.1;Name=WP_015571136.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=VMS06_RS12045;product=leucine--tRNA ligase;protein_id=WP_015571136.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 113935 114504 . + . ID=gene-VMS06_RS12050;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=VMS06_RS12050 NZ_JAVXZI010000009.1 Protein Homology CDS 113935 114504 . + 0 ID=cds-WP_022647432.1;Parent=gene-VMS06_RS12050;Dbxref=GenBank:WP_022647432.1;Name=WP_022647432.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169123.1;locus_tag=VMS06_RS12050;product=LPS assembly lipoprotein LptE;protein_id=WP_022647432.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 114504 115535 . + . ID=gene-VMS06_RS12055;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=VMS06_RS12055 NZ_JAVXZI010000009.1 Protein Homology CDS 114504 115535 . + 0 ID=cds-WP_063148014.1;Parent=gene-VMS06_RS12055;Dbxref=GenBank:WP_063148014.1;Name=WP_063148014.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308705.1;locus_tag=VMS06_RS12055;product=DNA polymerase III subunit delta;protein_id=WP_063148014.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 115528 116193 . + . ID=gene-VMS06_RS12060;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=VMS06_RS12060 NZ_JAVXZI010000009.1 Protein Homology CDS 115528 116193 . + 0 ID=cds-WP_023299589.1;Parent=gene-VMS06_RS12060;Dbxref=GenBank:WP_023299589.1;Name=WP_023299589.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169121.1;locus_tag=VMS06_RS12060;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_023299589.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 116462 116779 . + . ID=gene-VMS06_RS12065;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=VMS06_RS12065 NZ_JAVXZI010000009.1 Protein Homology CDS 116462 116779 . + 0 ID=cds-WP_003858696.1;Parent=gene-VMS06_RS12065;Dbxref=GenBank:WP_003858696.1;Name=WP_003858696.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177142.1;locus_tag=VMS06_RS12065;product=ribosome silencing factor;protein_id=WP_003858696.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 116783 117250 . + . ID=gene-VMS06_RS12070;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=VMS06_RS12070 NZ_JAVXZI010000009.1 Protein Homology CDS 116783 117250 . + 0 ID=cds-WP_003858701.1;Parent=gene-VMS06_RS12070;Dbxref=GenBank:WP_003858701.1;Name=WP_003858701.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=VMS06_RS12070;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_003858701.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 117279 119180 . + . ID=gene-VMS06_RS12075;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=VMS06_RS12075 NZ_JAVXZI010000009.1 Protein Homology CDS 117279 119180 . + 0 ID=cds-WP_015571138.1;Parent=gene-VMS06_RS12075;Dbxref=GenBank:WP_015571138.1;Name=WP_015571138.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459632.1;locus_tag=VMS06_RS12075;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_015571138.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 119183 120295 . + . ID=gene-VMS06_RS12080;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=VMS06_RS12080 NZ_JAVXZI010000009.1 Protein Homology CDS 119183 120295 . + 0 ID=cds-WP_022647428.1;Parent=gene-VMS06_RS12080;Dbxref=GenBank:WP_022647428.1;Name=WP_022647428.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=VMS06_RS12080;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_022647428.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 120312 121418 . + . ID=gene-VMS06_RS12085;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=VMS06_RS12085 NZ_JAVXZI010000009.1 Protein Homology CDS 120312 121418 . + 0 ID=cds-WP_022647427.1;Parent=gene-VMS06_RS12085;Dbxref=GenBank:WP_022647427.1;Name=WP_022647427.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694312.1;locus_tag=VMS06_RS12085;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_022647427.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 121558 122769 . + . ID=gene-VMS06_RS12090;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=VMS06_RS12090 NZ_JAVXZI010000009.1 Protein Homology CDS 121558 122769 . + 0 ID=cds-WP_003858714.1;Parent=gene-VMS06_RS12090;Dbxref=GenBank:WP_003858714.1;Name=WP_003858714.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459629.1;locus_tag=VMS06_RS12090;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_003858714.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 122877 123140 . + . ID=gene-VMS06_RS12095;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=VMS06_RS12095 NZ_JAVXZI010000009.1 Protein Homology CDS 122877 123140 . + 0 ID=cds-WP_003858718.1;Parent=gene-VMS06_RS12095;Dbxref=GenBank:WP_003858718.1;Name=WP_003858718.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225802.1;locus_tag=VMS06_RS12095;product=DUF493 family protein YbeD;protein_id=WP_003858718.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 123235 123876 . + . ID=gene-VMS06_RS12100;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=VMS06_RS12100 NZ_JAVXZI010000009.1 Protein Homology CDS 123235 123876 . + 0 ID=cds-WP_023299587.1;Parent=gene-VMS06_RS12100;Dbxref=GenBank:WP_023299587.1;Name=WP_023299587.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415163.2;locus_tag=VMS06_RS12100;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_023299587.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 124168 125121 . + . ID=gene-VMS06_RS12105;Name=VMS06_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12105 NZ_JAVXZI010000009.1 Protein Homology CDS 124168 125121 . + 0 ID=cds-WP_022647425.1;Parent=gene-VMS06_RS12105;Dbxref=GenBank:WP_022647425.1;Name=WP_022647425.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069321.1;locus_tag=VMS06_RS12105;product=YbeF family transcriptional regulator;protein_id=WP_022647425.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 125328 126293 . + . ID=gene-VMS06_RS12110;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=VMS06_RS12110 NZ_JAVXZI010000009.1 Protein Homology CDS 125328 126293 . + 0 ID=cds-WP_006809637.1;Parent=gene-VMS06_RS12110;Dbxref=GenBank:WP_006809637.1;Name=WP_006809637.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=VMS06_RS12110;product=lipoyl synthase;protein_id=WP_006809637.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 126374 126577 . - . ID=gene-VMS06_RS12115;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=VMS06_RS12115 NZ_JAVXZI010000009.1 Protein Homology CDS 126374 126577 . - 0 ID=cds-WP_022647424.1;Parent=gene-VMS06_RS12115;Dbxref=GenBank:WP_022647424.1;Name=WP_022647424.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308692.1;locus_tag=VMS06_RS12115;product=twin-arginine translocase subunit TatE;protein_id=WP_022647424.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 126706 127494 . - . ID=gene-VMS06_RS12120;Name=VMS06_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12120 NZ_JAVXZI010000009.1 Protein Homology CDS 126706 127494 . - 0 ID=cds-WP_022647423.1;Parent=gene-VMS06_RS12120;Dbxref=GenBank:WP_022647423.1;Name=WP_022647423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097597.1;locus_tag=VMS06_RS12120;product=deaminated glutathione amidase;protein_id=WP_022647423.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 127562 127945 . + . ID=gene-VMS06_RS12125;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=VMS06_RS12125 NZ_JAVXZI010000009.1 Protein Homology CDS 127562 127945 . + 0 ID=cds-WP_017382474.1;Parent=gene-VMS06_RS12125;Dbxref=GenBank:WP_017382474.1;Name=WP_017382474.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308690.1;locus_tag=VMS06_RS12125;product=fluoride efflux transporter CrcB;protein_id=WP_017382474.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 128165 128374 . - . ID=gene-VMS06_RS12130;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=VMS06_RS12130 NZ_JAVXZI010000009.1 Protein Homology CDS 128165 128374 . - 0 ID=cds-WP_002439184.1;Parent=gene-VMS06_RS12130;Dbxref=GenBank:WP_002439184.1;Name=WP_002439184.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225795.1;locus_tag=VMS06_RS12130;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002439184.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 128565 129140 . - . ID=gene-VMS06_RS12135;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=VMS06_RS12135 NZ_JAVXZI010000009.1 Protein Homology CDS 128565 129140 . - 0 ID=cds-WP_032621658.1;Parent=gene-VMS06_RS12135;Dbxref=GenBank:WP_032621658.1;Name=WP_032621658.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120838.1;locus_tag=VMS06_RS12135;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_032621658.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 129302 132418 . - . ID=gene-VMS06_RS12140;Name=VMS06_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12140 NZ_JAVXZI010000009.1 Protein Homology CDS 129302 132418 . - 0 ID=cds-WP_063148015.1;Parent=gene-VMS06_RS12140;Dbxref=GenBank:WP_063148015.1;Name=WP_063148015.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809642.1;locus_tag=VMS06_RS12140;product=efflux RND transporter permease subunit;protein_id=WP_063148015.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 132415 133614 . - . ID=gene-VMS06_RS12145;Name=VMS06_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12145 NZ_JAVXZI010000009.1 Protein Homology CDS 132415 133614 . - 0 ID=cds-WP_323630663.1;Parent=gene-VMS06_RS12145;Dbxref=GenBank:WP_323630663.1;Name=WP_323630663.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694317.1;locus_tag=VMS06_RS12145;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_323630663.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 133611 134867 . - . ID=gene-VMS06_RS12150;Name=VMS06_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12150 NZ_JAVXZI010000009.1 Protein Homology CDS 133611 134867 . - 0 ID=cds-WP_063148017.1;Parent=gene-VMS06_RS12150;Dbxref=GenBank:WP_063148017.1;Name=WP_063148017.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694318.1;locus_tag=VMS06_RS12150;product=TolC family protein;protein_id=WP_063148017.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 134879 135172 . - . ID=gene-VMS06_RS12155;Name=VMS06_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12155 NZ_JAVXZI010000009.1 Protein Homology CDS 134879 135172 . - 0 ID=cds-WP_023299583.1;Parent=gene-VMS06_RS12155;Dbxref=GenBank:WP_023299583.1;Name=WP_023299583.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809645.1;locus_tag=VMS06_RS12155;product=copper-binding protein;protein_id=WP_023299583.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 135226 135627 . - . ID=gene-VMS06_RS12160;Name=VMS06_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12160 NZ_JAVXZI010000009.1 Protein Homology CDS 135226 135627 . - 0 ID=cds-WP_063148018.1;Parent=gene-VMS06_RS12160;Dbxref=GenBank:WP_063148018.1;Name=WP_063148018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382480.1;locus_tag=VMS06_RS12160;product=hypothetical protein;protein_id=WP_063148018.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 135970 137337 . + . ID=gene-VMS06_RS12165;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=VMS06_RS12165 NZ_JAVXZI010000009.1 Protein Homology CDS 135970 137337 . + 0 ID=cds-WP_063148019.1;Parent=gene-VMS06_RS12165;Dbxref=GenBank:WP_063148019.1;Name=WP_063148019.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382481.1;locus_tag=VMS06_RS12165;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_063148019.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 137432 138241 . + . ID=gene-VMS06_RS12170;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=VMS06_RS12170 NZ_JAVXZI010000009.1 Protein Homology CDS 137432 138241 . + 0 ID=cds-WP_032624674.1;Parent=gene-VMS06_RS12170;Dbxref=GenBank:WP_032624674.1;Name=WP_032624674.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809648.1;locus_tag=VMS06_RS12170;product=ribonuclease I;protein_id=WP_032624674.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 138235 138861 . - . ID=gene-VMS06_RS12175;Name=VMS06_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12175 NZ_JAVXZI010000009.1 Protein Homology CDS 138235 138861 . - 0 ID=cds-WP_063148020.1;Parent=gene-VMS06_RS12175;Dbxref=GenBank:WP_063148020.1;Name=WP_063148020.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858756.1;locus_tag=VMS06_RS12175;product=flavin reductase family protein;protein_id=WP_063148020.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 139124 139534 . + . ID=gene-VMS06_RS12180;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=VMS06_RS12180 NZ_JAVXZI010000009.1 Protein Homology CDS 139124 139534 . + 0 ID=cds-WP_323630664.1;Parent=gene-VMS06_RS12180;Dbxref=GenBank:WP_323630664.1;Name=WP_323630664.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459608.1;locus_tag=VMS06_RS12180;product=nucleoside diphosphate kinase regulator;protein_id=WP_323630664.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 139674 140912 . - . ID=gene-VMS06_RS12185;Name=VMS06_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12185 NZ_JAVXZI010000009.1 Protein Homology CDS 139674 140912 . - 0 ID=cds-WP_063148021.1;Parent=gene-VMS06_RS12185;Dbxref=GenBank:WP_063148021.1;Name=WP_063148021.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308674.1;locus_tag=VMS06_RS12185;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_063148021.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 141092 141520 . + . ID=gene-VMS06_RS12190;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=VMS06_RS12190 NZ_JAVXZI010000009.1 Protein Homology CDS 141092 141520 . + 0 ID=cds-WP_022647413.1;Parent=gene-VMS06_RS12190;Dbxref=GenBank:WP_022647413.1;Name=WP_022647413.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459606.1;locus_tag=VMS06_RS12190;product=universal stress protein UspG;protein_id=WP_022647413.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 141580 143145 . - . ID=gene-VMS06_RS12195;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=VMS06_RS12195 NZ_JAVXZI010000009.1 Protein Homology CDS 141580 143145 . - 0 ID=cds-WP_063148022.1;Parent=gene-VMS06_RS12195;Dbxref=GenBank:WP_063148022.1;Name=WP_063148022.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=VMS06_RS12195;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_063148022.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 143334 143897 . - . ID=gene-VMS06_RS12200;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=VMS06_RS12200 NZ_JAVXZI010000009.1 Protein Homology CDS 143334 143897 . - 0 ID=cds-WP_014882974.1;Parent=gene-VMS06_RS12200;Dbxref=GenBank:WP_014882974.1;Name=WP_014882974.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=VMS06_RS12200;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_014882974.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 144519 145439 . + . ID=gene-VMS06_RS12205;Name=citR;gbkey=Gene;gene=citR;gene_biotype=protein_coding;gene_synonym=ybdO;locus_tag=VMS06_RS12205 NZ_JAVXZI010000009.1 Protein Homology CDS 144519 145439 . + 0 ID=cds-WP_022647411.1;Parent=gene-VMS06_RS12205;Dbxref=GenBank:WP_022647411.1;Name=WP_022647411.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=citR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694326.1;locus_tag=VMS06_RS12205;product=DNA-binding transcriptional repressor CitR;protein_id=WP_022647411.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 145568 146791 . + . ID=gene-VMS06_RS12210;Name=VMS06_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12210 NZ_JAVXZI010000009.1 Protein Homology CDS 145568 146791 . + 0 ID=cds-WP_063148023.1;Parent=gene-VMS06_RS12210;Dbxref=GenBank:WP_063148023.1;Name=WP_063148023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382491.1;locus_tag=VMS06_RS12210;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_063148023.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 146776 147402 . + . ID=gene-VMS06_RS12215;Name=VMS06_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12215 NZ_JAVXZI010000009.1 Protein Homology CDS 146776 147402 . + 0 ID=cds-WP_323630665.1;Parent=gene-VMS06_RS12215;Dbxref=GenBank:WP_323630665.1;Name=WP_323630665.1;Ontology_term=GO:0071453,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to oxygen levels|0071453||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009651651.1;locus_tag=VMS06_RS12215;product=IbrB-like domain-containing protein;protein_id=WP_323630665.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 147403 148563 . - . ID=gene-VMS06_RS12220;Name=VMS06_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12220 NZ_JAVXZI010000009.1 Protein Homology CDS 147403 148563 . - 0 ID=cds-WP_063148024.1;Parent=gene-VMS06_RS12220;Dbxref=GenBank:WP_063148024.1;Name=WP_063148024.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000183907.1;locus_tag=VMS06_RS12220;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_063148024.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 148686 149300 . + . ID=gene-VMS06_RS12225;Name=VMS06_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12225 NZ_JAVXZI010000009.1 Protein Homology CDS 148686 149300 . + 0 ID=cds-WP_063148025.1;Parent=gene-VMS06_RS12225;Dbxref=GenBank:WP_063148025.1;Name=WP_063148025.1;Ontology_term=GO:0019509,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016544.1;locus_tag=VMS06_RS12225;product=methylthioribulose 1-phosphate dehydratase;protein_id=WP_063148025.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 149297 149986 . + . ID=gene-VMS06_RS12230;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=protein_coding;locus_tag=VMS06_RS12230 NZ_JAVXZI010000009.1 Protein Homology CDS 149297 149986 . + 0 ID=cds-WP_023305674.1;Parent=gene-VMS06_RS12230;Dbxref=GenBank:WP_023305674.1;Name=WP_023305674.1;Ontology_term=GO:0019509,GO:0000287,GO:0043874;gbkey=CDS;gene=mtnC;go_function=magnesium ion binding|0000287||IEA,acireductone synthase activity|0043874||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225782.1;locus_tag=VMS06_RS12230;product=acireductone synthase;protein_id=WP_023305674.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 149983 150525 . + . ID=gene-VMS06_RS12235;Name=VMS06_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12235 NZ_JAVXZI010000009.1 Protein Homology CDS 149983 150525 . + 0 ID=cds-WP_063148026.1;Parent=gene-VMS06_RS12235;Dbxref=GenBank:WP_063148026.1;Name=WP_063148026.1;Ontology_term=GO:0019509,GO:0005506,GO:0010308,GO:0010309,GO:0016151;gbkey=CDS;go_function=iron ion binding|0005506||IEA,acireductone dioxygenase (Ni2+-requiring) activity|0010308||IEA,acireductone dioxygenase [iron(II)-requiring] activity|0010309||IEA,nickel cation binding|0016151||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225781.1;locus_tag=VMS06_RS12235;product=1%2C2-dihydroxy-3-keto-5-methylthiopentene dioxygenase;protein_id=WP_063148026.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 150647 150871 . - . ID=gene-VMS06_RS12240;Name=VMS06_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12240 NZ_JAVXZI010000009.1 Protein Homology CDS 150647 150871 . - 0 ID=cds-WP_063148027.1;Parent=gene-VMS06_RS12240;Dbxref=GenBank:WP_063148027.1;Name=WP_063148027.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571165.1;locus_tag=VMS06_RS12240;product=helix-turn-helix transcriptional regulator;protein_id=WP_063148027.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 150978 151250 . + . ID=gene-VMS06_RS12245;Name=VMS06_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12245 NZ_JAVXZI010000009.1 Protein Homology CDS 150978 151250 . + 0 ID=cds-WP_046618920.1;Parent=gene-VMS06_RS12245;Dbxref=GenBank:WP_046618920.1;Name=WP_046618920.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382499.1;locus_tag=VMS06_RS12245;product=helix-turn-helix domain-containing protein;protein_id=WP_046618920.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 151312 151782 . - . ID=gene-VMS06_RS12250;Name=VMS06_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12250 NZ_JAVXZI010000009.1 Protein Homology CDS 151312 151782 . - 0 ID=cds-WP_045622238.1;Parent=gene-VMS06_RS12250;Dbxref=GenBank:WP_045622238.1;Name=WP_045622238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013367319.1;locus_tag=VMS06_RS12250;product=SRPBCC family protein;protein_id=WP_045622238.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 151826 152842 . - . ID=gene-VMS06_RS12255;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=VMS06_RS12255 NZ_JAVXZI010000009.1 Protein Homology CDS 151826 152842 . - 0 ID=cds-WP_063138048.1;Parent=gene-VMS06_RS12255;Dbxref=GenBank:WP_063138048.1;Name=WP_063138048.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809662.1;locus_tag=VMS06_RS12255;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_063138048.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 152945 154144 . + . ID=gene-VMS06_RS12260;Name=mtnK;gbkey=Gene;gene=mtnK;gene_biotype=protein_coding;locus_tag=VMS06_RS12260 NZ_JAVXZI010000009.1 Protein Homology CDS 152945 154144 . + 0 ID=cds-WP_323630666.1;Parent=gene-VMS06_RS12260;Dbxref=GenBank:WP_323630666.1;Name=WP_323630666.1;Ontology_term=GO:0071265,GO:0046522;gbkey=CDS;gene=mtnK;go_function=S-methyl-5-thioribose kinase activity|0046522||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225763.1;locus_tag=VMS06_RS12260;product=S-methyl-5-thioribose kinase;protein_id=WP_323630666.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 154232 155473 . - . ID=gene-VMS06_RS12265;Name=VMS06_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12265 NZ_JAVXZI010000009.1 Protein Homology CDS 154232 155473 . - 0 ID=cds-WP_074174043.1;Parent=gene-VMS06_RS12265;Dbxref=GenBank:WP_074174043.1;Name=WP_074174043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848703.1;locus_tag=VMS06_RS12265;product=LVIVD repeat-containing protein;protein_id=WP_074174043.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 155566 156630 . - . ID=gene-VMS06_RS12270;Name=VMS06_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12270 NZ_JAVXZI010000009.1 Protein Homology CDS 155566 156630 . - 0 ID=cds-WP_063148029.1;Parent=gene-VMS06_RS12270;Dbxref=GenBank:WP_063148029.1;Name=WP_063148029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225759.1;locus_tag=VMS06_RS12270;product=sugar ABC transporter substrate-binding protein;protein_id=WP_063148029.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 156650 157645 . - . ID=gene-VMS06_RS12275;Name=VMS06_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12275 NZ_JAVXZI010000009.1 Protein Homology CDS 156650 157645 . - 0 ID=cds-WP_063148030.1;Parent=gene-VMS06_RS12275;Dbxref=GenBank:WP_063148030.1;Name=WP_063148030.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177090.1;locus_tag=VMS06_RS12275;product=ABC transporter permease;protein_id=WP_063148030.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 157642 159144 . - . ID=gene-VMS06_RS12280;Name=VMS06_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12280 NZ_JAVXZI010000009.1 Protein Homology CDS 157642 159144 . - 0 ID=cds-WP_038415646.1;Parent=gene-VMS06_RS12280;Dbxref=GenBank:WP_038415646.1;Name=WP_038415646.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225757.1;locus_tag=VMS06_RS12280;product=sugar ABC transporter ATP-binding protein;protein_id=WP_038415646.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 159304 160392 . + . ID=gene-VMS06_RS12285;Name=VMS06_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12285 NZ_JAVXZI010000009.1 Protein Homology CDS 159304 160392 . + 0 ID=cds-WP_038415644.1;Parent=gene-VMS06_RS12285;Dbxref=GenBank:WP_038415644.1;Name=WP_038415644.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571169.1;locus_tag=VMS06_RS12285;product=oxidoreductase;protein_id=WP_038415644.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 160450 161193 . + . ID=gene-VMS06_RS12290;Name=VMS06_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12290 NZ_JAVXZI010000009.1 Protein Homology CDS 160450 161193 . + 0 ID=cds-WP_038415642.1;Parent=gene-VMS06_RS12290;Dbxref=GenBank:WP_038415642.1;Name=WP_038415642.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225755.1;locus_tag=VMS06_RS12290;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_038415642.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 161377 161679 . + . ID=gene-VMS06_RS12295;Name=VMS06_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12295 NZ_JAVXZI010000009.1 Protein Homology CDS 161377 161679 . + 0 ID=cds-WP_032624689.1;Parent=gene-VMS06_RS12295;Dbxref=GenBank:WP_032624689.1;Name=WP_032624689.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225754.1;locus_tag=VMS06_RS12295;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_032624689.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 161654 162058 . + . ID=gene-VMS06_RS12300;Name=VMS06_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12300 NZ_JAVXZI010000009.1 Protein Homology CDS 161654 162058 . + 0 ID=cds-WP_038415640.1;Parent=gene-VMS06_RS12300;Dbxref=GenBank:WP_038415640.1;Name=WP_038415640.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225753.1;locus_tag=VMS06_RS12300;product=helix-turn-helix domain-containing protein;protein_id=WP_038415640.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 162055 162252 . - . ID=gene-VMS06_RS12305;Name=VMS06_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12305 NZ_JAVXZI010000009.1 Protein Homology CDS 162055 162252 . - 0 ID=cds-WP_006809671.1;Parent=gene-VMS06_RS12305;Dbxref=GenBank:WP_006809671.1;Name=WP_006809671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225752.1;locus_tag=VMS06_RS12305;product=YbdD/YjiX family protein;protein_id=WP_006809671.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 162357 164462 . - . ID=gene-VMS06_RS12310;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=VMS06_RS12310 NZ_JAVXZI010000009.1 Protein Homology CDS 162357 164462 . - 0 ID=cds-WP_038415638.1;Parent=gene-VMS06_RS12310;Dbxref=GenBank:WP_038415638.1;Name=WP_038415638.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308664.1;locus_tag=VMS06_RS12310;product=pyruvate/proton symporter CstA;protein_id=WP_038415638.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 164731 165426 . + . ID=gene-VMS06_RS12315;Name=VMS06_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12315 NZ_JAVXZI010000009.1 Protein Homology CDS 164731 165426 . + 0 ID=cds-WP_063148034.1;Parent=gene-VMS06_RS12315;Dbxref=GenBank:WP_063148034.1;Name=WP_063148034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428444.1;locus_tag=VMS06_RS12315;product=nucleoside recognition domain-containing protein;protein_id=WP_063148034.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 165423 165887 . + . ID=gene-VMS06_RS12320;Name=VMS06_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12320 NZ_JAVXZI010000009.1 Protein Homology CDS 165423 165887 . + 0 ID=cds-WP_023305665.1;Parent=gene-VMS06_RS12320;Dbxref=GenBank:WP_023305665.1;Name=WP_023305665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169076.1;locus_tag=VMS06_RS12320;product=YjiG family protein;protein_id=WP_023305665.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 165901 167013 . + . ID=gene-VMS06_RS12325;Name=VMS06_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12325 NZ_JAVXZI010000009.1 Protein Homology CDS 165901 167013 . + 0 ID=cds-WP_063148035.1;Parent=gene-VMS06_RS12325;Dbxref=GenBank:WP_063148035.1;Name=WP_063148035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885023.1;locus_tag=VMS06_RS12325;product=M20 family metallopeptidase;protein_id=WP_063148035.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 167104 167517 . - . ID=gene-VMS06_RS12330;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=VMS06_RS12330 NZ_JAVXZI010000009.1 Protein Homology CDS 167104 167517 . - 0 ID=cds-WP_063148036.1;Parent=gene-VMS06_RS12330;Dbxref=GenBank:WP_063148036.1;Name=WP_063148036.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308663.1;locus_tag=VMS06_RS12330;product=proofreading thioesterase EntH;protein_id=WP_063148036.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 167517 168269 . - . ID=gene-VMS06_RS12335;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=VMS06_RS12335 NZ_JAVXZI010000009.1 Protein Homology CDS 167517 168269 . - 0 ID=cds-WP_023305663.1;Parent=gene-VMS06_RS12335;Dbxref=GenBank:WP_023305663.1;Name=WP_023305663.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097631.1;locus_tag=VMS06_RS12335;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_023305663.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 168269 169123 . - . ID=gene-VMS06_RS12340;Name=VMS06_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12340 NZ_JAVXZI010000009.1 Protein Homology CDS 168269 169123 . - 0 ID=cds-WP_022647383.1;Parent=gene-VMS06_RS12340;Dbxref=GenBank:WP_022647383.1;Name=WP_022647383.1;Ontology_term=GO:0008908,GO:0016879;gbkey=CDS;go_function=isochorismatase activity|0008908||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308661.1;locus_tag=VMS06_RS12340;product=isochorismatase;protein_id=WP_022647383.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 169134 170744 . - . ID=gene-VMS06_RS12345;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=VMS06_RS12345 NZ_JAVXZI010000009.1 Protein Homology CDS 169134 170744 . - 0 ID=cds-WP_063148037.1;Parent=gene-VMS06_RS12345;Dbxref=GenBank:WP_063148037.1;Name=WP_063148037.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500992.1;locus_tag=VMS06_RS12345;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_063148037.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 170754 171929 . - . ID=gene-VMS06_RS12350;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=VMS06_RS12350 NZ_JAVXZI010000009.1 Protein Homology CDS 170754 171929 . - 0 ID=cds-WP_063148038.1;Parent=gene-VMS06_RS12350;Dbxref=GenBank:WP_063148038.1;Name=WP_063148038.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308659.1;locus_tag=VMS06_RS12350;product=isochorismate synthase EntC;protein_id=WP_063148038.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 172118 173077 . + . ID=gene-VMS06_RS12355;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=VMS06_RS12355 NZ_JAVXZI010000009.1 Protein Homology CDS 172118 173077 . + 0 ID=cds-WP_063148039.1;Parent=gene-VMS06_RS12355;Dbxref=GenBank:WP_063148039.1;Name=WP_063148039.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694338.1;locus_tag=VMS06_RS12355;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_063148039.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 173155 174381 . - . ID=gene-VMS06_RS12360;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=VMS06_RS12360 NZ_JAVXZI010000009.1 Protein Homology CDS 173155 174381 . - 0 ID=cds-WP_023299557.1;Parent=gene-VMS06_RS12360;Dbxref=GenBank:WP_023299557.1;Name=WP_023299557.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571178.1;locus_tag=VMS06_RS12360;product=enterobactin transporter EntS;protein_id=WP_023299557.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 174490 175494 . + . ID=gene-VMS06_RS12365;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=VMS06_RS12365 NZ_JAVXZI010000009.1 Protein Homology CDS 174490 175494 . + 0 ID=cds-WP_032624697.1;Parent=gene-VMS06_RS12365;Dbxref=GenBank:WP_032624697.1;Name=WP_032624697.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885029.1;locus_tag=VMS06_RS12365;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_032624697.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 175494 176483 . + . ID=gene-VMS06_RS12370;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=VMS06_RS12370 NZ_JAVXZI010000009.1 Protein Homology CDS 175494 176483 . + 0 ID=cds-WP_074136373.1;Parent=gene-VMS06_RS12370;Dbxref=GenBank:WP_074136373.1;Name=WP_074136373.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459583.1;locus_tag=VMS06_RS12370;product=iron-enterobactin ABC transporter permease;protein_id=WP_074136373.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 176480 177280 . + . ID=gene-VMS06_RS12375;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=VMS06_RS12375 NZ_JAVXZI010000009.1 Protein Homology CDS 176480 177280 . + 0 ID=cds-WP_063148041.1;Parent=gene-VMS06_RS12375;Dbxref=GenBank:WP_063148041.1;Name=WP_063148041.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428401.1;locus_tag=VMS06_RS12375;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_063148041.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 177401 181258 . - . ID=gene-VMS06_RS12380;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=VMS06_RS12380 NZ_JAVXZI010000009.1 Protein Homology CDS 177401 181258 . - 0 ID=cds-WP_063148042.1;Parent=gene-VMS06_RS12380;Dbxref=GenBank:WP_063148042.1;Name=WP_063148042.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571181.1;locus_tag=VMS06_RS12380;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_063148042.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 181255 181467 . - . ID=gene-VMS06_RS12385;Name=VMS06_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12385 NZ_JAVXZI010000009.1 Protein Homology CDS 181255 181467 . - 0 ID=cds-WP_063148043.1;Parent=gene-VMS06_RS12385;Dbxref=GenBank:WP_063148043.1;Name=WP_063148043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809684.1;locus_tag=VMS06_RS12385;product=MbtH family protein;protein_id=WP_063148043.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 181478 182677 . - . ID=gene-VMS06_RS12390;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=VMS06_RS12390 NZ_JAVXZI010000009.1 Protein Homology CDS 181478 182677 . - 0 ID=cds-WP_063148044.1;Parent=gene-VMS06_RS12390;Dbxref=GenBank:WP_063148044.1;Name=WP_063148044.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694342.1;locus_tag=VMS06_RS12390;product=enterochelin esterase;protein_id=WP_063148044.1;transl_table=11 NZ_JAVXZI010000009.1 RefSeq gene 182824 185064 . + . ID=gene-VMS06_RS12395;Name=VMS06_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12395 NZ_JAVXZI010000009.1 Protein Homology CDS 182824 185064 . + 0 ID=cds-WP_023299551.1;Parent=gene-VMS06_RS12395;Dbxref=GenBank:WP_023299551.1;Name=WP_023299551.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737617.1;locus_tag=VMS06_RS12395;product=TonB-dependent siderophore receptor;protein_id=WP_023299551.1;transl_table=11 ##sequence-region NZ_JAVXZI010000010.1 1 183291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000010.1 RefSeq region 1 183291 . + . ID=NZ_JAVXZI010000010.1:1..183291;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000010.1 RefSeq gene 1 974 . + . ID=gene-VMS06_RS12400;Name=VMS06_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12400;partial=true;start_range=.,1 NZ_JAVXZI010000010.1 Protein Homology CDS 1 974 . + 2 ID=cds-WP_323630668.1;Parent=gene-VMS06_RS12400;Dbxref=GenBank:WP_323630668.1;Name=WP_323630668.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014605541.1;locus_tag=VMS06_RS12400;partial=true;product=RHS repeat domain-containing protein;protein_id=WP_323630668.1;start_range=.,1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 971 1450 . + . ID=gene-VMS06_RS12405;Name=VMS06_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12405 NZ_JAVXZI010000010.1 GeneMarkS-2+ CDS 971 1450 . + 0 ID=cds-WP_063147192.1;Parent=gene-VMS06_RS12405;Dbxref=GenBank:WP_063147192.1;Name=WP_063147192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS12405;product=hypothetical protein;protein_id=WP_063147192.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq pseudogene 1878 2126 . - . ID=gene-VMS06_RS12410;Name=VMS06_RS12410;end_range=2126,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS12410;partial=true;pseudo=true;start_range=.,1878 NZ_JAVXZI010000010.1 Protein Homology CDS 1878 2126 . - 0 ID=cds-VMS06_RS12410;Parent=gene-VMS06_RS12410;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=VMS06_RS12410;partial=true;product=DUF933 domain-containing protein;pseudo=true;start_range=.,1878;transl_table=11 NZ_JAVXZI010000010.1 RefSeq pseudogene 2125 3298 . + . ID=gene-VMS06_RS12415;Name=VMS06_RS12415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS12415;partial=true;pseudo=true;start_range=.,2125 NZ_JAVXZI010000010.1 Protein Homology CDS 2125 3298 . + 0 ID=cds-VMS06_RS12415;Parent=gene-VMS06_RS12415;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010246008.1;locus_tag=VMS06_RS12415;partial=true;product=RHS repeat domain-containing protein;pseudo=true;start_range=.,2125;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 3307 3750 . + . ID=gene-VMS06_RS12420;Name=VMS06_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12420 NZ_JAVXZI010000010.1 Protein Homology CDS 3307 3750 . + 0 ID=cds-WP_058646411.1;Parent=gene-VMS06_RS12420;Dbxref=GenBank:WP_058646411.1;Name=WP_058646411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832298.1;locus_tag=VMS06_RS12420;product=DUF6386 family protein;protein_id=WP_058646411.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 3883 4110 . + . ID=gene-VMS06_RS12425;Name=VMS06_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12425 NZ_JAVXZI010000010.1 Protein Homology CDS 3883 4110 . + 0 ID=cds-WP_023300301.1;Parent=gene-VMS06_RS12425;Dbxref=GenBank:WP_023300301.1;Name=WP_023300301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812592.1;locus_tag=VMS06_RS12425;product=hypothetical protein;protein_id=WP_023300301.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 4407 4736 . + . ID=gene-VMS06_RS12430;Name=VMS06_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12430 NZ_JAVXZI010000010.1 Protein Homology CDS 4407 4736 . + 0 ID=cds-WP_226856410.1;Parent=gene-VMS06_RS12430;Dbxref=GenBank:WP_226856410.1;Name=WP_226856410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884206.1;locus_tag=VMS06_RS12430;product=hypothetical protein;protein_id=WP_226856410.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq pseudogene 4837 5177 . + . ID=gene-VMS06_RS22890;Name=VMS06_RS22890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22890;pseudo=true NZ_JAVXZI010000010.1 Protein Homology CDS 4837 5177 . + 0 ID=cds-VMS06_RS22890;Parent=gene-VMS06_RS22890;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884201.1;locus_tag=VMS06_RS22890;product=YciI family protein;pseudo=true;transl_table=11 NZ_JAVXZI010000010.1 RefSeq pseudogene 5237 5392 . - . ID=gene-VMS06_RS12435;Name=VMS06_RS12435;end_range=5392,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS12435;partial=true;pseudo=true NZ_JAVXZI010000010.1 Protein Homology CDS 5237 5392 . - 0 ID=cds-VMS06_RS12435;Parent=gene-VMS06_RS12435;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=5392,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=VMS06_RS12435;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JAVXZI010000010.1 RefSeq pseudogene 5376 6502 . + . ID=gene-VMS06_RS12440;Name=VMS06_RS12440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS12440;partial=true;pseudo=true;start_range=.,5376 NZ_JAVXZI010000010.1 Protein Homology CDS 5376 6502 . + 0 ID=cds-VMS06_RS12440;Parent=gene-VMS06_RS12440;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693290.1;locus_tag=VMS06_RS12440;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,5376;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 6514 6996 . + . ID=gene-VMS06_RS12445;Name=VMS06_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12445 NZ_JAVXZI010000010.1 Protein Homology CDS 6514 6996 . + 0 ID=cds-WP_063147196.1;Parent=gene-VMS06_RS12445;Dbxref=GenBank:WP_063147196.1;Name=WP_063147196.1;Ontology_term=GO:0042546;gbkey=CDS;go_process=cell wall biogenesis|0042546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832293.1;locus_tag=VMS06_RS12445;product=SMI1/KNR4 family protein;protein_id=WP_063147196.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 7273 8367 . - . ID=gene-VMS06_RS12450;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=VMS06_RS12450 NZ_JAVXZI010000010.1 Protein Homology CDS 7273 8367 . - 0 ID=cds-WP_010432886.1;Parent=gene-VMS06_RS12450;Dbxref=GenBank:WP_010432886.1;Name=WP_010432886.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=VMS06_RS12450;product=redox-regulated ATPase YchF;protein_id=WP_010432886.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 8494 9078 . - . ID=gene-VMS06_RS12455;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=VMS06_RS12455 NZ_JAVXZI010000010.1 Protein Homology CDS 8494 9078 . - 0 ID=cds-WP_006810922.1;Parent=gene-VMS06_RS12455;Dbxref=GenBank:WP_006810922.1;Name=WP_006810922.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=VMS06_RS12455;product=aminoacyl-tRNA hydrolase;protein_id=WP_006810922.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 9353 9628 . + . ID=gene-VMS06_RS12460;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=VMS06_RS12460 NZ_JAVXZI010000010.1 Protein Homology CDS 9353 9628 . + 0 ID=cds-WP_022648382.1;Parent=gene-VMS06_RS12460;Dbxref=GenBank:WP_022648382.1;Name=WP_022648382.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016536782.1;locus_tag=VMS06_RS12460;product=stress-induced protein YchH;protein_id=WP_022648382.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 9749 10807 . + . ID=gene-VMS06_RS12465;Name=VMS06_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12465 NZ_JAVXZI010000010.1 Protein Homology CDS 9749 10807 . + 0 ID=cds-WP_017384262.1;Parent=gene-VMS06_RS12465;Dbxref=GenBank:WP_017384262.1;Name=WP_017384262.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432898.1;locus_tag=VMS06_RS12465;product=MerR family transcriptional regulator;protein_id=WP_017384262.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 10793 12472 . - . ID=gene-VMS06_RS12470;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=VMS06_RS12470 NZ_JAVXZI010000010.1 Protein Homology CDS 10793 12472 . - 0 ID=cds-WP_063147197.1;Parent=gene-VMS06_RS12470;Dbxref=GenBank:WP_063147197.1;Name=WP_063147197.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884198.1;locus_tag=VMS06_RS12470;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_063147197.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 12597 13544 . - . ID=gene-VMS06_RS12475;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=VMS06_RS12475 NZ_JAVXZI010000010.1 Protein Homology CDS 12597 13544 . - 0 ID=cds-WP_003856663.1;Parent=gene-VMS06_RS12475;Dbxref=GenBank:WP_003856663.1;Name=WP_003856663.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=VMS06_RS12475;product=ribose-phosphate diphosphokinase;protein_id=WP_003856663.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 13670 14539 . - . ID=gene-VMS06_RS12480;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=VMS06_RS12480 NZ_JAVXZI010000010.1 Protein Homology CDS 13670 14539 . - 0 ID=cds-WP_063147199.1;Parent=gene-VMS06_RS12480;Dbxref=GenBank:WP_063147199.1;Name=WP_063147199.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499510.1;locus_tag=VMS06_RS12480;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_063147199.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 14536 15147 . - . ID=gene-VMS06_RS12485;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=VMS06_RS12485 NZ_JAVXZI010000010.1 Protein Homology CDS 14536 15147 . - 0 ID=cds-WP_003856665.1;Parent=gene-VMS06_RS12485;Dbxref=GenBank:WP_003856665.1;Name=WP_003856665.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499511.1;locus_tag=VMS06_RS12485;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_003856665.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 15349 16605 . + . ID=gene-VMS06_RS12490;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=VMS06_RS12490 NZ_JAVXZI010000010.1 Protein Homology CDS 15349 16605 . + 0 ID=cds-WP_063147201.1;Parent=gene-VMS06_RS12490;Dbxref=GenBank:WP_063147201.1;Name=WP_063147201.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=VMS06_RS12490;product=glutamyl-tRNA reductase;protein_id=WP_063147201.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 16647 17729 . + . ID=gene-VMS06_RS12495;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=VMS06_RS12495 NZ_JAVXZI010000010.1 Protein Homology CDS 16647 17729 . + 0 ID=cds-WP_003856667.1;Parent=gene-VMS06_RS12495;Dbxref=GenBank:WP_003856667.1;Name=WP_003856667.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=VMS06_RS12495;product=peptide chain release factor 1;protein_id=WP_003856667.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 17729 18559 . + . ID=gene-VMS06_RS12500;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=VMS06_RS12500 NZ_JAVXZI010000010.1 Protein Homology CDS 17729 18559 . + 0 ID=cds-WP_063147203.1;Parent=gene-VMS06_RS12500;Dbxref=GenBank:WP_063147203.1;Name=WP_063147203.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384258.1;locus_tag=VMS06_RS12500;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_063147203.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 18556 18948 . + . ID=gene-VMS06_RS12505;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=VMS06_RS12505 NZ_JAVXZI010000010.1 Protein Homology CDS 18556 18948 . + 0 ID=cds-WP_022648377.1;Parent=gene-VMS06_RS12505;Dbxref=GenBank:WP_022648377.1;Name=WP_022648377.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803635.1;locus_tag=VMS06_RS12505;product=invasion regulator SirB2;protein_id=WP_022648377.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 18952 19761 . + . ID=gene-VMS06_RS12510;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=VMS06_RS12510 NZ_JAVXZI010000010.1 Protein Homology CDS 18952 19761 . + 0 ID=cds-WP_022648376.1;Parent=gene-VMS06_RS12510;Dbxref=GenBank:WP_022648376.1;Name=WP_022648376.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460729.1;locus_tag=VMS06_RS12510;product=invasion regulator SirB1;protein_id=WP_022648376.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 19798 20652 . + . ID=gene-VMS06_RS12515;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=VMS06_RS12515 NZ_JAVXZI010000010.1 Protein Homology CDS 19798 20652 . + 0 ID=cds-WP_022648375.1;Parent=gene-VMS06_RS12515;Dbxref=GenBank:WP_022648375.1;Name=WP_022648375.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460728.1;locus_tag=VMS06_RS12515;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_022648375.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 20759 21859 . - . ID=gene-VMS06_RS12520;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=VMS06_RS12520 NZ_JAVXZI010000010.1 Protein Homology CDS 20759 21859 . - 0 ID=cds-WP_003856672.1;Parent=gene-VMS06_RS12520;Dbxref=GenBank:WP_003856672.1;Name=WP_003856672.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227528.1;locus_tag=VMS06_RS12520;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_003856672.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 22128 22358 . + . ID=gene-VMS06_RS12525;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=VMS06_RS12525 NZ_JAVXZI010000010.1 Protein Homology CDS 22128 22358 . + 0 ID=cds-WP_003856674.1;Parent=gene-VMS06_RS12525;Dbxref=GenBank:WP_003856674.1;Name=WP_003856674.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=VMS06_RS12525;product=putative cation transport regulator ChaB;protein_id=WP_003856674.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 22536 23231 . + . ID=gene-VMS06_RS12530;Name=VMS06_RS12530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12530 NZ_JAVXZI010000010.1 Protein Homology CDS 22536 23231 . + 0 ID=cds-WP_017384255.1;Parent=gene-VMS06_RS12530;Dbxref=GenBank:WP_017384255.1;Name=WP_017384255.1;Ontology_term=GO:0006751,GO:0061928;gbkey=CDS;go_function=glutathione specific gamma-glutamylcyclotransferase activity|0061928||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415736.2;locus_tag=VMS06_RS12530;product=gamma-glutamylcyclotransferase;protein_id=WP_017384255.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 23262 23501 . - . ID=gene-VMS06_RS12535;Name=VMS06_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12535 NZ_JAVXZI010000010.1 Protein Homology CDS 23262 23501 . - 0 ID=cds-WP_015570352.1;Parent=gene-VMS06_RS12535;Dbxref=GenBank:WP_015570352.1;Name=WP_015570352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499520.1;locus_tag=VMS06_RS12535;product=hypothetical protein;protein_id=WP_015570352.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 23698 25482 . - . ID=gene-VMS06_RS12540;Name=VMS06_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12540 NZ_JAVXZI010000010.1 Protein Homology CDS 23698 25482 . - 0 ID=cds-WP_023306429.1;Parent=gene-VMS06_RS12540;Dbxref=GenBank:WP_023306429.1;Name=WP_023306429.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170487.1;locus_tag=VMS06_RS12540;product=methyl-accepting chemotaxis protein;protein_id=WP_023306429.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 25589 25942 . - . ID=gene-VMS06_RS12545;Name=VMS06_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12545 NZ_JAVXZI010000010.1 Protein Homology CDS 25589 25942 . - 0 ID=cds-WP_063147205.1;Parent=gene-VMS06_RS12545;Dbxref=GenBank:WP_063147205.1;Name=WP_063147205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309751.1;locus_tag=VMS06_RS12545;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_063147205.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 26016 27188 . + . ID=gene-VMS06_RS12550;Name=nasR;gbkey=Gene;gene=nasR;gene_biotype=protein_coding;locus_tag=VMS06_RS12550 NZ_JAVXZI010000010.1 Protein Homology CDS 26016 27188 . + 0 ID=cds-WP_058646421.1;Parent=gene-VMS06_RS12550;Dbxref=GenBank:WP_058646421.1;Name=WP_058646421.1;Note=NasR is a transcription antiterminator and transcriptional regulator for the nasFEDCBA operon;Ontology_term=GO:0031564,GO:0003723;gbkey=CDS;gene=nasR;go_function=RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856683.1;locus_tag=VMS06_RS12550;product=nitrate regulatory protein NasR;protein_id=WP_058646421.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 27416 28663 . + . ID=gene-VMS06_RS12555;Name=VMS06_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12555 NZ_JAVXZI010000010.1 Protein Homology CDS 27416 28663 . + 0 ID=cds-WP_022648370.1;Parent=gene-VMS06_RS12555;Dbxref=GenBank:WP_022648370.1;Name=WP_022648370.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882355.1;locus_tag=VMS06_RS12555;product=CmpA/NrtA family ABC transporter substrate-binding protein;protein_id=WP_022648370.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 28666 29544 . + . ID=gene-VMS06_RS12560;Name=ntrB;gbkey=Gene;gene=ntrB;gene_biotype=protein_coding;locus_tag=VMS06_RS12560 NZ_JAVXZI010000010.1 Protein Homology CDS 28666 29544 . + 0 ID=cds-WP_022648369.1;Parent=gene-VMS06_RS12560;Dbxref=GenBank:WP_022648369.1;Name=WP_022648369.1;Ontology_term=GO:0015706,GO:0015112,GO:0016020,GO:0055052;gbkey=CDS;gene=ntrB;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=nitrate transmembrane transporter activity|0015112||IEA;go_process=nitrate transmembrane transport|0015706||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010432943.1;locus_tag=VMS06_RS12560;product=nitrate ABC transporter permease;protein_id=WP_022648369.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 29554 30342 . + . ID=gene-VMS06_RS12565;Name=VMS06_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12565 NZ_JAVXZI010000010.1 Protein Homology CDS 29554 30342 . + 0 ID=cds-WP_042715167.1;Parent=gene-VMS06_RS12565;Dbxref=GenBank:WP_042715167.1;Name=WP_042715167.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227518.1;locus_tag=VMS06_RS12565;product=ABC transporter ATP-binding protein;protein_id=WP_042715167.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 30355 34341 . + . ID=gene-VMS06_RS12570;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=VMS06_RS12570 NZ_JAVXZI010000010.1 Protein Homology CDS 30355 34341 . + 0 ID=cds-WP_074136293.1;Parent=gene-VMS06_RS12570;Dbxref=GenBank:WP_074136293.1;Name=WP_074136293.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856690.1;locus_tag=VMS06_RS12570;product=nitrite reductase large subunit NirB;protein_id=WP_074136293.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 34338 36815 . + . ID=gene-VMS06_RS12575;Name=VMS06_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12575 NZ_JAVXZI010000010.1 Protein Homology CDS 34338 36815 . + 0 ID=cds-WP_063147207.1;Parent=gene-VMS06_RS12575;Dbxref=GenBank:WP_063147207.1;Name=WP_063147207.1;Ontology_term=GO:0042128,GO:0016491,GO:0043546,GO:0051539,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856692.1;locus_tag=VMS06_RS12575;product=nitrate reductase;protein_id=WP_063147207.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 36990 38408 . + . ID=gene-VMS06_RS12580;Name=VMS06_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12580 NZ_JAVXZI010000010.1 Protein Homology CDS 36990 38408 . + 0 ID=cds-WP_022648365.1;Parent=gene-VMS06_RS12580;Dbxref=GenBank:WP_022648365.1;Name=WP_022648365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693301.1;locus_tag=VMS06_RS12580;product=YchO/YchP family invasin;protein_id=WP_022648365.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 38410 39060 . - . ID=gene-VMS06_RS12585;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=VMS06_RS12585 NZ_JAVXZI010000010.1 Protein Homology CDS 38410 39060 . - 0 ID=cds-WP_003856701.1;Parent=gene-VMS06_RS12585;Dbxref=GenBank:WP_003856701.1;Name=WP_003856701.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309753.1;locus_tag=VMS06_RS12585;product=two-component system response regulator NarL;protein_id=WP_003856701.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 39053 40849 . - . ID=gene-VMS06_RS12590;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=VMS06_RS12590 NZ_JAVXZI010000010.1 Protein Homology CDS 39053 40849 . - 0 ID=cds-WP_063147209.1;Parent=gene-VMS06_RS12590;Dbxref=GenBank:WP_063147209.1;Name=WP_063147209.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460722.1;locus_tag=VMS06_RS12590;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_063147209.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 41159 42556 . + . ID=gene-VMS06_RS12595;Name=VMS06_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12595 NZ_JAVXZI010000010.1 Protein Homology CDS 41159 42556 . + 0 ID=cds-WP_063147211.1;Parent=gene-VMS06_RS12595;Dbxref=GenBank:WP_063147211.1;Name=WP_063147211.1;Ontology_term=GO:0015706,GO:0015707,GO:0015112,GO:0015113,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nitrate transmembrane transporter activity|0015112||IEA,nitrite transmembrane transporter activity|0015113||IEA;go_process=nitrate transmembrane transport|0015706||IEA,nitrite transport|0015707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882361.1;locus_tag=VMS06_RS12595;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_063147211.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 42938 46681 . + . ID=gene-VMS06_RS12600;Name=VMS06_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12600 NZ_JAVXZI010000010.1 Protein Homology CDS 42938 46681 . + 0 ID=cds-WP_046619563.1;Parent=gene-VMS06_RS12600;Dbxref=GenBank:WP_046619563.1;Name=WP_046619563.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460720.1;locus_tag=VMS06_RS12600;product=nitrate reductase subunit alpha;protein_id=WP_046619563.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 46678 48213 . + . ID=gene-VMS06_RS12605;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=VMS06_RS12605 NZ_JAVXZI010000010.1 Protein Homology CDS 46678 48213 . + 0 ID=cds-WP_032624103.1;Parent=gene-VMS06_RS12605;Dbxref=GenBank:WP_032624103.1;Name=WP_032624103.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882363.1;locus_tag=VMS06_RS12605;product=nitrate reductase subunit beta;protein_id=WP_032624103.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 48210 48920 . + . ID=gene-VMS06_RS12610;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=VMS06_RS12610 NZ_JAVXZI010000010.1 Protein Homology CDS 48210 48920 . + 0 ID=cds-WP_022648360.1;Parent=gene-VMS06_RS12610;Dbxref=GenBank:WP_022648360.1;Name=WP_022648360.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460718.1;locus_tag=VMS06_RS12610;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_022648360.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 48920 49597 . + . ID=gene-VMS06_RS12615;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=VMS06_RS12615 NZ_JAVXZI010000010.1 Protein Homology CDS 48920 49597 . + 0 ID=cds-WP_022648359.1;Parent=gene-VMS06_RS12615;Dbxref=GenBank:WP_022648359.1;Name=WP_022648359.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227506.1;locus_tag=VMS06_RS12615;product=respiratory nitrate reductase subunit gamma;protein_id=WP_022648359.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 49809 49893 . - . ID=gene-VMS06_RS12620;Name=VMS06_RS12620;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS12620 NZ_JAVXZI010000010.1 tRNAscan-SE tRNA 49809 49893 . - . ID=rna-VMS06_RS12620;Parent=gene-VMS06_RS12620;anticodon=(pos:complement(49857..49859));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS12620;product=tRNA-Tyr NZ_JAVXZI010000010.1 tRNAscan-SE exon 49809 49893 . - . ID=exon-VMS06_RS12620-1;Parent=rna-VMS06_RS12620;anticodon=(pos:complement(49857..49859));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS12620;product=tRNA-Tyr NZ_JAVXZI010000010.1 RefSeq gene 49928 50012 . - . ID=gene-VMS06_RS12625;Name=VMS06_RS12625;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS12625 NZ_JAVXZI010000010.1 tRNAscan-SE tRNA 49928 50012 . - . ID=rna-VMS06_RS12625;Parent=gene-VMS06_RS12625;anticodon=(pos:complement(49976..49978));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS12625;product=tRNA-Tyr NZ_JAVXZI010000010.1 tRNAscan-SE exon 49928 50012 . - . ID=exon-VMS06_RS12625-1;Parent=rna-VMS06_RS12625;anticodon=(pos:complement(49976..49978));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS12625;product=tRNA-Tyr NZ_JAVXZI010000010.1 RefSeq gene 50170 51012 . - . ID=gene-VMS06_RS12630;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=VMS06_RS12630 NZ_JAVXZI010000010.1 Protein Homology CDS 50170 51012 . - 0 ID=cds-WP_003856715.1;Parent=gene-VMS06_RS12630;Dbxref=GenBank:WP_003856715.1;Name=WP_003856715.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460715.1;locus_tag=VMS06_RS12630;product=formyltetrahydrofolate deformylase;protein_id=WP_003856715.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 51054 51518 . - . ID=gene-VMS06_RS12635;Name=VMS06_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12635 NZ_JAVXZI010000010.1 Protein Homology CDS 51054 51518 . - 0 ID=cds-WP_063147213.1;Parent=gene-VMS06_RS12635;Dbxref=GenBank:WP_063147213.1;Name=WP_063147213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384240.1;locus_tag=VMS06_RS12635;product=YchJ family protein;protein_id=WP_063147213.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 51632 52534 . + . ID=gene-VMS06_RS12640;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=VMS06_RS12640 NZ_JAVXZI010000010.1 Protein Homology CDS 51632 52534 . + 0 ID=cds-WP_022648357.1;Parent=gene-VMS06_RS12640;Dbxref=GenBank:WP_022648357.1;Name=WP_022648357.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=phosphatidylcholine lysophospholipase A1 activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810892.1;locus_tag=VMS06_RS12640;product=patatin-like phospholipase RssA;protein_id=WP_022648357.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 52624 53637 . + . ID=gene-VMS06_RS12645;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=VMS06_RS12645 NZ_JAVXZI010000010.1 Protein Homology CDS 52624 53637 . + 0 ID=cds-WP_003856721.1;Parent=gene-VMS06_RS12645;Dbxref=GenBank:WP_003856721.1;Name=WP_003856721.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460712.1;locus_tag=VMS06_RS12645;product=two-component system response regulator RssB;protein_id=WP_003856721.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 53837 54742 . + . ID=gene-VMS06_RS12650;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=VMS06_RS12650 NZ_JAVXZI010000010.1 Protein Homology CDS 53837 54742 . + 0 ID=cds-WP_022648355.1;Parent=gene-VMS06_RS12650;Dbxref=GenBank:WP_022648355.1;Name=WP_022648355.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856723.1;locus_tag=VMS06_RS12650;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_022648355.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 54944 55357 . - . ID=gene-VMS06_RS12655;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=VMS06_RS12655 NZ_JAVXZI010000010.1 Protein Homology CDS 54944 55357 . - 0 ID=cds-WP_003856724.1;Parent=gene-VMS06_RS12655;Dbxref=GenBank:WP_003856724.1;Name=WP_003856724.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460710.1;locus_tag=VMS06_RS12655;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_003856724.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 55908 56522 . + . ID=gene-VMS06_RS12660;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=VMS06_RS12660 NZ_JAVXZI010000010.1 Protein Homology CDS 55908 56522 . + 0 ID=cds-WP_032622434.1;Parent=gene-VMS06_RS12660;Dbxref=GenBank:WP_032622434.1;Name=WP_032622434.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884166.1;locus_tag=VMS06_RS12660;product=thymidine kinase;protein_id=WP_032622434.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 56592 59273 . - . ID=gene-VMS06_RS12665;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=VMS06_RS12665 NZ_JAVXZI010000010.1 Protein Homology CDS 56592 59273 . - 0 ID=cds-WP_063147215.1;Parent=gene-VMS06_RS12665;Dbxref=GenBank:WP_063147215.1;Name=WP_063147215.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460708.1;locus_tag=VMS06_RS12665;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_063147215.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 59754 60401 . + . ID=gene-VMS06_RS12670;Name=VMS06_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12670 NZ_JAVXZI010000010.1 Protein Homology CDS 59754 60401 . + 0 ID=cds-WP_017384236.1;Parent=gene-VMS06_RS12670;Dbxref=GenBank:WP_017384236.1;Name=WP_017384236.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460707.1;locus_tag=VMS06_RS12670;product=YchE family NAAT transporter;protein_id=WP_017384236.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 61171 62802 . + . ID=gene-VMS06_RS12675;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=VMS06_RS12675 NZ_JAVXZI010000010.1 Protein Homology CDS 61171 62802 . + 0 ID=cds-WP_023300277.1;Parent=gene-VMS06_RS12675;Dbxref=GenBank:WP_023300277.1;Name=WP_023300277.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001675662.1;locus_tag=VMS06_RS12675;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_023300277.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 62885 63805 . + . ID=gene-VMS06_RS12680;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=VMS06_RS12680 NZ_JAVXZI010000010.1 Protein Homology CDS 62885 63805 . + 0 ID=cds-WP_003856738.1;Parent=gene-VMS06_RS12680;Dbxref=GenBank:WP_003856738.1;Name=WP_003856738.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=VMS06_RS12680;product=oligopeptide ABC transporter permease OppB;protein_id=WP_003856738.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 63818 64726 . + . ID=gene-VMS06_RS12685;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=VMS06_RS12685 NZ_JAVXZI010000010.1 Protein Homology CDS 63818 64726 . + 0 ID=cds-WP_015570372.1;Parent=gene-VMS06_RS12685;Dbxref=GenBank:WP_015570372.1;Name=WP_015570372.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=VMS06_RS12685;product=oligopeptide ABC transporter permease OppC;protein_id=WP_015570372.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 64738 65751 . + . ID=gene-VMS06_RS12690;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=VMS06_RS12690 NZ_JAVXZI010000010.1 Protein Homology CDS 64738 65751 . + 0 ID=cds-WP_017384234.1;Parent=gene-VMS06_RS12690;Dbxref=GenBank:WP_017384234.1;Name=WP_017384234.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309773.1;locus_tag=VMS06_RS12690;product=ABC transporter ATP-binding protein;protein_id=WP_017384234.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 65748 66752 . + . ID=gene-VMS06_RS12695;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=VMS06_RS12695 NZ_JAVXZI010000010.1 Protein Homology CDS 65748 66752 . + 0 ID=cds-WP_022648351.1;Parent=gene-VMS06_RS12695;Dbxref=GenBank:WP_022648351.1;Name=WP_022648351.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227487.1;locus_tag=VMS06_RS12695;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_022648351.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 66799 67635 . + . ID=gene-VMS06_RS12700;Name=VMS06_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12700 NZ_JAVXZI010000010.1 Protein Homology CDS 66799 67635 . + 0 ID=cds-WP_003856745.1;Parent=gene-VMS06_RS12700;Dbxref=GenBank:WP_003856745.1;Name=WP_003856745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856745.1;locus_tag=VMS06_RS12700;product=ion transporter;protein_id=WP_003856745.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 67667 67996 . - . ID=gene-VMS06_RS12705;Name=VMS06_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12705 NZ_JAVXZI010000010.1 Protein Homology CDS 67667 67996 . - 0 ID=cds-WP_006810881.1;Parent=gene-VMS06_RS12705;Dbxref=GenBank:WP_006810881.1;Name=WP_006810881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227485.1;locus_tag=VMS06_RS12705;product=HI1450 family dsDNA-mimic protein;protein_id=WP_006810881.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 68030 69490 . - . ID=gene-VMS06_RS12710;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=VMS06_RS12710 NZ_JAVXZI010000010.1 Protein Homology CDS 68030 69490 . - 0 ID=cds-WP_022648349.1;Parent=gene-VMS06_RS12710;Dbxref=GenBank:WP_022648349.1;Name=WP_022648349.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=VMS06_RS12710;product=cardiolipin synthase;protein_id=WP_022648349.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 69634 69807 . + . ID=gene-VMS06_RS12715;Name=VMS06_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12715 NZ_JAVXZI010000010.1 Protein Homology CDS 69634 69807 . + 0 ID=cds-WP_017384232.1;Parent=gene-VMS06_RS12715;Dbxref=GenBank:WP_017384232.1;Name=WP_017384232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165316.1;locus_tag=VMS06_RS12715;product=YciY family protein;protein_id=WP_017384232.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 69926 70054 . + . ID=gene-VMS06_RS22895;Name=VMS06_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22895 NZ_JAVXZI010000010.1 Protein Homology CDS 69926 70054 . + 0 ID=cds-WP_209662595.1;Parent=gene-VMS06_RS22895;Dbxref=GenBank:WP_209662595.1;Name=WP_209662595.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033695.1;locus_tag=VMS06_RS22895;product=KPN_01571 family protein;protein_id=WP_209662595.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 70066 70476 . + . ID=gene-VMS06_RS12720;Name=VMS06_RS12720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12720 NZ_JAVXZI010000010.1 Protein Homology CDS 70066 70476 . + 0 ID=cds-WP_023300275.1;Parent=gene-VMS06_RS12720;Dbxref=GenBank:WP_023300275.1;Name=WP_023300275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384231.1;locus_tag=VMS06_RS12720;product=Exc2 family lipoprotein;protein_id=WP_023300275.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 70544 71179 . + . ID=gene-VMS06_RS12725;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=VMS06_RS12725 NZ_JAVXZI010000010.1 Protein Homology CDS 70544 71179 . + 0 ID=cds-WP_063147217.1;Parent=gene-VMS06_RS12725;Dbxref=GenBank:WP_063147217.1;Name=WP_063147217.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017676.1;locus_tag=VMS06_RS12725;product=leucine efflux protein LeuE;protein_id=WP_063147217.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 71213 71509 . - . ID=gene-VMS06_RS12730;Name=VMS06_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12730 NZ_JAVXZI010000010.1 Protein Homology CDS 71213 71509 . - 0 ID=cds-WP_003856755.1;Parent=gene-VMS06_RS12730;Dbxref=GenBank:WP_003856755.1;Name=WP_003856755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415767.2;locus_tag=VMS06_RS12730;product=YciI family protein;protein_id=WP_003856755.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 71731 72453 . + . ID=gene-VMS06_RS12735;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=VMS06_RS12735 NZ_JAVXZI010000010.1 Protein Homology CDS 71731 72453 . + 0 ID=cds-WP_063147219.1;Parent=gene-VMS06_RS12735;Dbxref=GenBank:WP_063147219.1;Name=WP_063147219.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856757.1;locus_tag=VMS06_RS12735;product=TonB system transport protein TonB;protein_id=WP_063147219.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 72492 72887 . - . ID=gene-VMS06_RS12740;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=VMS06_RS12740 NZ_JAVXZI010000010.1 Protein Homology CDS 72492 72887 . - 0 ID=cds-WP_022648341.1;Parent=gene-VMS06_RS12740;Dbxref=GenBank:WP_022648341.1;Name=WP_022648341.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502796.1;locus_tag=VMS06_RS12740;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_022648341.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 72986 75172 . - . ID=gene-VMS06_RS12745;Name=VMS06_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12745 NZ_JAVXZI010000010.1 Protein Homology CDS 72986 75172 . - 0 ID=cds-WP_023300271.1;Parent=gene-VMS06_RS12745;Dbxref=GenBank:WP_023300271.1;Name=WP_023300271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810874.1;locus_tag=VMS06_RS12745;product=TonB-dependent siderophore receptor;protein_id=WP_023300271.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 75353 75892 . - . ID=gene-VMS06_RS12750;Name=VMS06_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12750 NZ_JAVXZI010000010.1 Protein Homology CDS 75353 75892 . - 0 ID=cds-WP_003856762.1;Parent=gene-VMS06_RS12750;Dbxref=GenBank:WP_003856762.1;Name=WP_003856762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226445.1;locus_tag=VMS06_RS12750;product=septation protein A;protein_id=WP_003856762.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 75906 76649 . - . ID=gene-VMS06_RS12755;Name=VMS06_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12755 NZ_JAVXZI010000010.1 Protein Homology CDS 75906 76649 . - 0 ID=cds-WP_023300270.1;Parent=gene-VMS06_RS12755;Dbxref=GenBank:WP_023300270.1;Name=WP_023300270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460693.1;locus_tag=VMS06_RS12755;product=YciC family protein;protein_id=WP_023300270.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 76675 77079 . - . ID=gene-VMS06_RS12760;Name=VMS06_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12760 NZ_JAVXZI010000010.1 Protein Homology CDS 76675 77079 . - 0 ID=cds-WP_045621607.1;Parent=gene-VMS06_RS12760;Dbxref=GenBank:WP_045621607.1;Name=WP_045621607.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114958.1;locus_tag=VMS06_RS12760;product=YkgJ family cysteine cluster protein;protein_id=WP_045621607.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 77362 77994 . + . ID=gene-VMS06_RS12765;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=VMS06_RS12765 NZ_JAVXZI010000010.1 Protein Homology CDS 77362 77994 . + 0 ID=cds-WP_063147220.1;Parent=gene-VMS06_RS12765;Dbxref=GenBank:WP_063147220.1;Name=WP_063147220.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415772.1;locus_tag=VMS06_RS12765;product=outer membrane protein OmpW;protein_id=WP_063147220.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 77958 78245 . + . ID=gene-VMS06_RS22960;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=VMS06_RS22960 NZ_JAVXZI010000010.1 Protein Homology CDS 77958 78245 . + 0 ID=cds-WP_463726436.1;Parent=gene-VMS06_RS22960;Dbxref=GenBank:WP_463726436.1;Name=WP_463726436.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: protein motif:HMM:NF049533.2;locus_tag=VMS06_RS22960;product=cold shock small protein YmcF;protein_id=WP_463726436.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 78281 78514 . - . ID=gene-VMS06_RS12770;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=VMS06_RS12770 NZ_JAVXZI010000010.1 Protein Homology CDS 78281 78514 . - 0 ID=cds-WP_003856774.1;Parent=gene-VMS06_RS12770;Dbxref=GenBank:WP_003856774.1;Name=WP_003856774.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310696.1;locus_tag=VMS06_RS12770;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_003856774.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 78511 79722 . - . ID=gene-VMS06_RS12775;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=VMS06_RS12775 NZ_JAVXZI010000010.1 Protein Homology CDS 78511 79722 . - 0 ID=cds-WP_063147221.1;Parent=gene-VMS06_RS12775;Dbxref=GenBank:WP_063147221.1;Name=WP_063147221.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832234.1;locus_tag=VMS06_RS12775;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_063147221.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 79897 80706 . - . ID=gene-VMS06_RS12780;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=VMS06_RS12780 NZ_JAVXZI010000010.1 Protein Homology CDS 79897 80706 . - 0 ID=cds-WP_022648335.1;Parent=gene-VMS06_RS12780;Dbxref=GenBank:WP_022648335.1;Name=WP_022648335.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226459.1;locus_tag=VMS06_RS12780;product=tryptophan synthase subunit alpha;protein_id=WP_022648335.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 80706 81899 . - . ID=gene-VMS06_RS12785;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=VMS06_RS12785 NZ_JAVXZI010000010.1 Protein Homology CDS 80706 81899 . - 0 ID=cds-WP_022648334.1;Parent=gene-VMS06_RS12785;Dbxref=GenBank:WP_022648334.1;Name=WP_022648334.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226460.1;locus_tag=VMS06_RS12785;product=tryptophan synthase subunit beta;protein_id=WP_022648334.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 81910 83268 . - . ID=gene-VMS06_RS12790;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=VMS06_RS12790 NZ_JAVXZI010000010.1 Protein Homology CDS 81910 83268 . - 0 ID=cds-WP_032624116.1;Parent=gene-VMS06_RS12790;Dbxref=GenBank:WP_032624116.1;Name=WP_032624116.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309861.2;locus_tag=VMS06_RS12790;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_032624116.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 83272 84867 . - . ID=gene-VMS06_RS12795;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=VMS06_RS12795 NZ_JAVXZI010000010.1 Protein Homology CDS 83272 84867 . - 0 ID=cds-WP_022648332.1;Parent=gene-VMS06_RS12795;Dbxref=GenBank:WP_022648332.1;Name=WP_022648332.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=VMS06_RS12795;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_022648332.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 84867 86429 . - . ID=gene-VMS06_RS12800;Name=VMS06_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12800 NZ_JAVXZI010000010.1 Protein Homology CDS 84867 86429 . - 0 ID=cds-WP_063147222.1;Parent=gene-VMS06_RS12800;Dbxref=GenBank:WP_063147222.1;Name=WP_063147222.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226463.1;locus_tag=VMS06_RS12800;product=anthranilate synthase component 1;protein_id=WP_063147222.1;transl_table=11 NZ_JAVXZI010000010.1 cmsearch sequence_feature 86453 86547 . - . ID=id-NZ_JAVXZI010000010.1:86453..86547;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVXZI010000010.1 RefSeq gene 86524 86568 . - . ID=gene-VMS06_RS12805;Name=trpL;gbkey=Gene;gene=trpL;gene_biotype=protein_coding;locus_tag=VMS06_RS12805 NZ_JAVXZI010000010.1 Protein Homology CDS 86524 86568 . - 0 ID=cds-WP_071524153.1;Parent=gene-VMS06_RS12805;Dbxref=GenBank:WP_071524153.1;Name=WP_071524153.1;gbkey=CDS;gene=trpL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_448140.1;locus_tag=VMS06_RS12805;product=trp operon leader peptide;protein_id=WP_071524153.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 86708 87589 . + . ID=gene-VMS06_RS12810;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=VMS06_RS12810 NZ_JAVXZI010000010.1 Protein Homology CDS 86708 87589 . + 0 ID=cds-WP_032622438.1;Parent=gene-VMS06_RS12810;Dbxref=GenBank:WP_032622438.1;Name=WP_032622438.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309865.1;locus_tag=VMS06_RS12810;product=RNase RNM;protein_id=WP_032622438.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 87586 88206 . + . ID=gene-VMS06_RS12815;Name=VMS06_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12815 NZ_JAVXZI010000010.1 Protein Homology CDS 87586 88206 . + 0 ID=cds-WP_003856793.1;Parent=gene-VMS06_RS12815;Dbxref=GenBank:WP_003856793.1;Name=WP_003856793.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=VMS06_RS12815;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_003856793.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 88304 89179 . + . ID=gene-VMS06_RS12820;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=VMS06_RS12820 NZ_JAVXZI010000010.1 Protein Homology CDS 88304 89179 . + 0 ID=cds-WP_003856794.1;Parent=gene-VMS06_RS12820;Dbxref=GenBank:WP_003856794.1;Name=WP_003856794.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460678.1;locus_tag=VMS06_RS12820;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_003856794.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 89215 89805 . - . ID=gene-VMS06_RS12825;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=VMS06_RS12825 NZ_JAVXZI010000010.1 Protein Homology CDS 89215 89805 . - 0 ID=cds-WP_023300262.1;Parent=gene-VMS06_RS12825;Dbxref=GenBank:WP_023300262.1;Name=WP_023300262.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415786.1;locus_tag=VMS06_RS12825;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_023300262.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 89802 90563 . - . ID=gene-VMS06_RS12830;Name=VMS06_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12830 NZ_JAVXZI010000010.1 Protein Homology CDS 89802 90563 . - 0 ID=cds-WP_022648324.1;Parent=gene-VMS06_RS12830;Dbxref=GenBank:WP_022648324.1;Name=WP_022648324.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226470.1;locus_tag=VMS06_RS12830;product=YciK family oxidoreductase;protein_id=WP_022648324.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 90816 91862 . + . ID=gene-VMS06_RS12835;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=VMS06_RS12835 NZ_JAVXZI010000010.1 Protein Homology CDS 90816 91862 . + 0 ID=cds-WP_058646438.1;Parent=gene-VMS06_RS12835;Dbxref=GenBank:WP_058646438.1;Name=WP_058646438.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309871.1;locus_tag=VMS06_RS12835;product=protease SohB;protein_id=WP_058646438.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 91898 92149 . - . ID=gene-VMS06_RS12840;Name=VMS06_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12840 NZ_JAVXZI010000010.1 Protein Homology CDS 91898 92149 . - 0 ID=cds-WP_003856804.1;Parent=gene-VMS06_RS12840;Dbxref=GenBank:WP_003856804.1;Name=WP_003856804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226473.1;locus_tag=VMS06_RS12840;product=YciN family protein;protein_id=WP_003856804.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 92548 95145 . + . ID=gene-VMS06_RS12845;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=VMS06_RS12845 NZ_JAVXZI010000010.1 Protein Homology CDS 92548 95145 . + 0 ID=cds-WP_022648322.1;Parent=gene-VMS06_RS12845;Dbxref=GenBank:WP_022648322.1;Name=WP_022648322.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=VMS06_RS12845;product=type I DNA topoisomerase;protein_id=WP_022648322.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 95332 96306 . + . ID=gene-VMS06_RS12850;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=VMS06_RS12850 NZ_JAVXZI010000010.1 Protein Homology CDS 95332 96306 . + 0 ID=cds-WP_006810844.1;Parent=gene-VMS06_RS12850;Dbxref=GenBank:WP_006810844.1;Name=WP_006810844.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=VMS06_RS12850;product=HTH-type transcriptional regulator CysB;protein_id=WP_006810844.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 96643 96783 . + . ID=gene-VMS06_RS12855;Name=VMS06_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12855 NZ_JAVXZI010000010.1 Protein Homology CDS 96643 96783 . + 0 ID=cds-WP_096168876.1;Parent=gene-VMS06_RS12855;Dbxref=GenBank:WP_096168876.1;Name=WP_096168876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588449.3;locus_tag=VMS06_RS12855;product=YmiA family putative membrane protein;protein_id=WP_096168876.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 96792 96956 . + . ID=gene-VMS06_RS12860;Name=VMS06_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12860 NZ_JAVXZI010000010.1 GeneMarkS-2+ CDS 96792 96956 . + 0 ID=cds-WP_162181317.1;Parent=gene-VMS06_RS12860;Dbxref=GenBank:WP_162181317.1;Name=WP_162181317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS12860;product=hypothetical protein;protein_id=WP_162181317.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 97094 97192 . + . ID=gene-VMS06_RS12865;Name=ymiC;gbkey=Gene;gene=ymiC;gene_biotype=protein_coding;locus_tag=VMS06_RS12865 NZ_JAVXZI010000010.1 Protein Homology CDS 97094 97192 . + 0 ID=cds-WP_032103392.1;Parent=gene-VMS06_RS12865;Dbxref=GenBank:WP_032103392.1;Name=WP_032103392.1;gbkey=CDS;gene=ymiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_061709002.1;locus_tag=VMS06_RS12865;product=small membrane protein YmiC;protein_id=WP_032103392.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 97358 100033 . + . ID=gene-VMS06_RS12870;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=VMS06_RS12870 NZ_JAVXZI010000010.1 Protein Homology CDS 97358 100033 . + 0 ID=cds-WP_023306390.1;Parent=gene-VMS06_RS12870;Dbxref=GenBank:WP_023306390.1;Name=WP_023306390.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856812.1;locus_tag=VMS06_RS12870;product=aconitate hydratase AcnA;protein_id=WP_023306390.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 100071 100661 . - . ID=gene-VMS06_RS12875;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=VMS06_RS12875 NZ_JAVXZI010000010.1 Protein Homology CDS 100071 100661 . - 0 ID=cds-WP_013096372.1;Parent=gene-VMS06_RS12875;Dbxref=GenBank:WP_013096372.1;Name=WP_013096372.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132238.1;locus_tag=VMS06_RS12875;product=GTP cyclohydrolase II;protein_id=WP_013096372.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 100859 101626 . + . ID=gene-VMS06_RS12880;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=VMS06_RS12880 NZ_JAVXZI010000010.1 Protein Homology CDS 100859 101626 . + 0 ID=cds-WP_032622464.1;Parent=gene-VMS06_RS12880;Dbxref=GenBank:WP_032622464.1;Name=WP_032622464.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856815.1;locus_tag=VMS06_RS12880;product=phosphatidylglycerophosphatase B;protein_id=WP_032622464.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 101775 102083 . + . ID=gene-VMS06_RS12885;Name=VMS06_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12885 NZ_JAVXZI010000010.1 Protein Homology CDS 101775 102083 . + 0 ID=cds-WP_006810839.1;Parent=gene-VMS06_RS12885;Dbxref=GenBank:WP_006810839.1;Name=WP_006810839.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309879.1;locus_tag=VMS06_RS12885;product=LapA family protein;protein_id=WP_006810839.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 102090 103259 . + . ID=gene-VMS06_RS12890;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=VMS06_RS12890 NZ_JAVXZI010000010.1 Protein Homology CDS 102090 103259 . + 0 ID=cds-WP_003856819.1;Parent=gene-VMS06_RS12890;Dbxref=GenBank:WP_003856819.1;Name=WP_003856819.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=VMS06_RS12890;product=lipopolysaccharide assembly protein LapB;protein_id=WP_003856819.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 103444 104181 . + . ID=gene-VMS06_RS12895;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=VMS06_RS12895 NZ_JAVXZI010000010.1 Protein Homology CDS 103444 104181 . + 0 ID=cds-WP_032624129.1;Parent=gene-VMS06_RS12895;Dbxref=GenBank:WP_032624129.1;Name=WP_032624129.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415797.1;locus_tag=VMS06_RS12895;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_032624129.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 104181 104507 . + . ID=gene-VMS06_RS12900;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=VMS06_RS12900 NZ_JAVXZI010000010.1 Protein Homology CDS 104181 104507 . + 0 ID=cds-WP_063147223.1;Parent=gene-VMS06_RS12900;Dbxref=GenBank:WP_063147223.1;Name=WP_063147223.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415798.2;locus_tag=VMS06_RS12900;product=stress response translation initiation inhibitor YciH;protein_id=WP_063147223.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 104612 104830 . - . ID=gene-VMS06_RS12905;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=VMS06_RS12905 NZ_JAVXZI010000010.1 Protein Homology CDS 104612 104830 . - 0 ID=cds-WP_003856823.1;Parent=gene-VMS06_RS12905;Dbxref=GenBank:WP_003856823.1;Name=WP_003856823.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=VMS06_RS12905;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_003856823.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 105093 105845 . - . ID=gene-VMS06_RS12910;Name=yciT;gbkey=Gene;gene=yciT;gene_biotype=protein_coding;gene_synonym=deoT;locus_tag=VMS06_RS12910 NZ_JAVXZI010000010.1 Protein Homology CDS 105093 105845 . - 0 ID=cds-WP_022648316.1;Parent=gene-VMS06_RS12910;Dbxref=GenBank:WP_022648316.1;Name=WP_022648316.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yciT;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384211.1;locus_tag=VMS06_RS12910;product=DNA-binding transcriptional regulator YciT;protein_id=WP_022648316.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 105883 106065 . - . ID=gene-VMS06_RS12915;Name=VMS06_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12915 NZ_JAVXZI010000010.1 Protein Homology CDS 105883 106065 . - 0 ID=cds-WP_022648315.1;Parent=gene-VMS06_RS12915;Dbxref=GenBank:WP_022648315.1;Name=WP_022648315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892757.1;locus_tag=VMS06_RS12915;product=YciZ family protein;protein_id=WP_022648315.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 106257 107126 . + . ID=gene-VMS06_RS12920;Name=VMS06_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12920 NZ_JAVXZI010000010.1 Protein Homology CDS 106257 107126 . + 0 ID=cds-WP_047051533.1;Parent=gene-VMS06_RS12920;Dbxref=GenBank:WP_047051533.1;Name=WP_047051533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884079.1;locus_tag=VMS06_RS12920;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_047051533.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 107123 109111 . - . ID=gene-VMS06_RS12925;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=VMS06_RS12925 NZ_JAVXZI010000010.1 Protein Homology CDS 107123 109111 . - 0 ID=cds-WP_063147225.1;Parent=gene-VMS06_RS12925;Dbxref=GenBank:WP_063147225.1;Name=WP_063147225.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431729.1;locus_tag=VMS06_RS12925;product=cyclic di-GMP phosphodiesterase;protein_id=WP_063147225.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 109318 111252 . - . ID=gene-VMS06_RS12930;Name=VMS06_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12930 NZ_JAVXZI010000010.1 Protein Homology CDS 109318 111252 . - 0 ID=cds-WP_023300251.1;Parent=gene-VMS06_RS12930;Dbxref=GenBank:WP_023300251.1;Name=WP_023300251.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460661.1;locus_tag=VMS06_RS12930;product=exoribonuclease II;protein_id=WP_023300251.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 111341 112327 . - . ID=gene-VMS06_RS12935;Name=VMS06_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12935 NZ_JAVXZI010000010.1 Protein Homology CDS 111341 112327 . - 0 ID=cds-WP_063147227.1;Parent=gene-VMS06_RS12935;Dbxref=GenBank:WP_063147227.1;Name=WP_063147227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384206.1;locus_tag=VMS06_RS12935;product=hypothetical protein;protein_id=WP_063147227.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 112481 113269 . - . ID=gene-VMS06_RS12940;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=VMS06_RS12940 NZ_JAVXZI010000010.1 Protein Homology CDS 112481 113269 . - 0 ID=cds-WP_003856831.1;Parent=gene-VMS06_RS12940;Dbxref=GenBank:WP_003856831.1;Name=WP_003856831.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=VMS06_RS12940;product=enoyl-ACP reductase FabI;protein_id=WP_003856831.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 113551 113952 . - . ID=gene-VMS06_RS12945;Name=VMS06_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12945 NZ_JAVXZI010000010.1 Protein Homology CDS 113551 113952 . - 0 ID=cds-WP_063147229.1;Parent=gene-VMS06_RS12945;Dbxref=GenBank:WP_063147229.1;Name=WP_063147229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383079.1;locus_tag=VMS06_RS12945;product=RidA family protein;protein_id=WP_063147229.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 114084 114674 . + . ID=gene-VMS06_RS12950;Name=VMS06_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS12950 NZ_JAVXZI010000010.1 Protein Homology CDS 114084 114674 . + 0 ID=cds-WP_022648309.1;Parent=gene-VMS06_RS12950;Dbxref=GenBank:WP_022648309.1;Name=WP_022648309.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856836.1;locus_tag=VMS06_RS12950;product=TetR/AcrR family transcriptional regulator;protein_id=WP_022648309.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 114671 115477 . - . ID=gene-VMS06_RS12955;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=VMS06_RS12955 NZ_JAVXZI010000010.1 Protein Homology CDS 114671 115477 . - 0 ID=cds-WP_003856838.1;Parent=gene-VMS06_RS12955;Dbxref=GenBank:WP_003856838.1;Name=WP_003856838.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415806.1;locus_tag=VMS06_RS12955;product=putrescine export ABC transporter ATP-binding protein SapF;protein_id=WP_003856838.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 115479 116471 . - . ID=gene-VMS06_RS12960;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=VMS06_RS12960 NZ_JAVXZI010000010.1 Protein Homology CDS 115479 116471 . - 0 ID=cds-WP_003856840.1;Parent=gene-VMS06_RS12960;Dbxref=GenBank:WP_003856840.1;Name=WP_003856840.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460653.1;locus_tag=VMS06_RS12960;product=putrescine export ABC transporter ATP-binding protein SapD;protein_id=WP_003856840.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 116471 117361 . - . ID=gene-VMS06_RS12965;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=VMS06_RS12965 NZ_JAVXZI010000010.1 Protein Homology CDS 116471 117361 . - 0 ID=cds-WP_003856843.1;Parent=gene-VMS06_RS12965;Dbxref=GenBank:WP_003856843.1;Name=WP_003856843.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838220.1;locus_tag=VMS06_RS12965;product=putrescine export ABC transporter permease SapC;protein_id=WP_003856843.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 117348 118313 . - . ID=gene-VMS06_RS12970;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=VMS06_RS12970 NZ_JAVXZI010000010.1 Protein Homology CDS 117348 118313 . - 0 ID=cds-WP_022648308.1;Parent=gene-VMS06_RS12970;Dbxref=GenBank:WP_022648308.1;Name=WP_022648308.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=VMS06_RS12970;product=putrescine export ABC transporter permease SapB;protein_id=WP_022648308.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 118310 119950 . - . ID=gene-VMS06_RS12975;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=VMS06_RS12975 NZ_JAVXZI010000010.1 Protein Homology CDS 118310 119950 . - 0 ID=cds-WP_022648307.1;Parent=gene-VMS06_RS12975;Dbxref=GenBank:WP_022648307.1;Name=WP_022648307.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=VMS06_RS12975;product=ABC transporter substrate-binding protein SapA;protein_id=WP_022648307.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 120039 121031 . - . ID=gene-VMS06_RS12980;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=VMS06_RS12980 NZ_JAVXZI010000010.1 Protein Homology CDS 120039 121031 . - 0 ID=cds-WP_164972926.1;Parent=gene-VMS06_RS12980;Dbxref=GenBank:WP_164972926.1;Name=WP_164972926.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170346.1;locus_tag=VMS06_RS12980;product=phage shock protein operon transcriptional activator;protein_id=WP_164972926.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 121183 121851 . + . ID=gene-VMS06_RS12985;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=VMS06_RS12985 NZ_JAVXZI010000010.1 Protein Homology CDS 121183 121851 . + 0 ID=cds-WP_022651342.1;Parent=gene-VMS06_RS12985;Dbxref=GenBank:WP_022651342.1;Name=WP_022651342.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460648.1;locus_tag=VMS06_RS12985;product=phage shock protein PspA;protein_id=WP_022651342.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 121901 122125 . + . ID=gene-VMS06_RS12990;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=VMS06_RS12990 NZ_JAVXZI010000010.1 Protein Homology CDS 121901 122125 . + 0 ID=cds-WP_022648304.1;Parent=gene-VMS06_RS12990;Dbxref=GenBank:WP_022648304.1;Name=WP_022648304.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309909.1;locus_tag=VMS06_RS12990;product=envelope stress response membrane protein PspB;protein_id=WP_022648304.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 122125 122484 . + . ID=gene-VMS06_RS12995;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=VMS06_RS12995 NZ_JAVXZI010000010.1 Protein Homology CDS 122125 122484 . + 0 ID=cds-WP_032653788.1;Parent=gene-VMS06_RS12995;Dbxref=GenBank:WP_032653788.1;Name=WP_032653788.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309910.1;locus_tag=VMS06_RS12995;product=envelope stress response membrane protein PspC;protein_id=WP_032653788.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 122497 122721 . + . ID=gene-VMS06_RS13000;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=VMS06_RS13000 NZ_JAVXZI010000010.1 Protein Homology CDS 122497 122721 . + 0 ID=cds-WP_006810818.1;Parent=gene-VMS06_RS13000;Dbxref=GenBank:WP_006810818.1;Name=WP_006810818.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884060.1;locus_tag=VMS06_RS13000;product=phage shock protein PspD;protein_id=WP_006810818.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 122906 124603 . + . ID=gene-VMS06_RS13005;Name=VMS06_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13005 NZ_JAVXZI010000010.1 Protein Homology CDS 122906 124603 . + 0 ID=cds-WP_063147233.1;Parent=gene-VMS06_RS13005;Dbxref=GenBank:WP_063147233.1;Name=WP_063147233.1;Ontology_term=GO:0005975,GO:0016758;gbkey=CDS;go_function=hexosyltransferase activity|0016758||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810817.1;locus_tag=VMS06_RS13005;product=sugar phosphorylase;protein_id=WP_063147233.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 124617 125909 . + . ID=gene-VMS06_RS13010;Name=VMS06_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13010 NZ_JAVXZI010000010.1 Protein Homology CDS 124617 125909 . + 0 ID=cds-WP_063843818.1;Parent=gene-VMS06_RS13010;Dbxref=GenBank:WP_063843818.1;Name=WP_063843818.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000920903.1;locus_tag=VMS06_RS13010;product=ABC transporter substrate-binding protein;protein_id=WP_063843818.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 125931 126812 . + . ID=gene-VMS06_RS13015;Name=VMS06_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13015 NZ_JAVXZI010000010.1 Protein Homology CDS 125931 126812 . + 0 ID=cds-WP_022648300.1;Parent=gene-VMS06_RS13015;Dbxref=GenBank:WP_022648300.1;Name=WP_022648300.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415827.1;locus_tag=VMS06_RS13015;product=carbohydrate ABC transporter permease;protein_id=WP_022648300.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 126799 127641 . + . ID=gene-VMS06_RS13020;Name=VMS06_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13020 NZ_JAVXZI010000010.1 Protein Homology CDS 126799 127641 . + 0 ID=cds-WP_063843819.1;Parent=gene-VMS06_RS13020;Dbxref=GenBank:WP_063843819.1;Name=WP_063843819.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309918.1;locus_tag=VMS06_RS13020;product=carbohydrate ABC transporter permease;protein_id=WP_063843819.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 127670 128722 . + . ID=gene-VMS06_RS13025;Name=VMS06_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13025 NZ_JAVXZI010000010.1 Protein Homology CDS 127670 128722 . + 0 ID=cds-WP_015570403.1;Parent=gene-VMS06_RS13025;Dbxref=GenBank:WP_015570403.1;Name=WP_015570403.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415829.1;locus_tag=VMS06_RS13025;product=D-guloside 3-dehydrogenase;protein_id=WP_015570403.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 128740 129528 . + . ID=gene-VMS06_RS13030;Name=VMS06_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13030 NZ_JAVXZI010000010.1 Protein Homology CDS 128740 129528 . + 0 ID=cds-WP_063147237.1;Parent=gene-VMS06_RS13030;Dbxref=GenBank:WP_063147237.1;Name=WP_063147237.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415830.2;locus_tag=VMS06_RS13030;product=3-dehydro-D-guloside 4-epimerase;protein_id=WP_063147237.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 129540 130598 . + . ID=gene-VMS06_RS13035;Name=VMS06_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13035 NZ_JAVXZI010000010.1 Protein Homology CDS 129540 130598 . + 0 ID=cds-WP_100148811.1;Parent=gene-VMS06_RS13035;Dbxref=GenBank:WP_100148811.1;Name=WP_100148811.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006175596.1;locus_tag=VMS06_RS13035;product=D-glucoside 3-dehydrogenase;protein_id=WP_100148811.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 130592 132871 . + . ID=gene-VMS06_RS13040;Name=VMS06_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13040 NZ_JAVXZI010000010.1 Protein Homology CDS 130592 132871 . + 0 ID=cds-WP_063147239.1;Parent=gene-VMS06_RS13040;Dbxref=GenBank:WP_063147239.1;Name=WP_063147239.1;Ontology_term=GO:0005975,GO:0016787,GO:0030246;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856872.1;locus_tag=VMS06_RS13040;product=glycoside hydrolase family 65 protein;protein_id=WP_063147239.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 132861 133526 . + . ID=gene-VMS06_RS13045;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=protein_coding;locus_tag=VMS06_RS13045 NZ_JAVXZI010000010.1 Protein Homology CDS 132861 133526 . + 0 ID=cds-WP_323630669.1;Parent=gene-VMS06_RS13045;Dbxref=GenBank:WP_323630669.1;Name=WP_323630669.1;Ontology_term=GO:0005975,GO:0000287,GO:0008801;gbkey=CDS;gene=pgmB;go_function=magnesium ion binding|0000287||IEA,beta-phosphoglucomutase activity|0008801||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570406.1;locus_tag=VMS06_RS13045;product=beta-phosphoglucomutase;protein_id=WP_323630669.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 133540 134622 . + . ID=gene-VMS06_RS13050;Name=VMS06_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13050 NZ_JAVXZI010000010.1 Protein Homology CDS 133540 134622 . + 0 ID=cds-WP_022648294.1;Parent=gene-VMS06_RS13050;Dbxref=GenBank:WP_022648294.1;Name=WP_022648294.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001711780.1;locus_tag=VMS06_RS13050;product=ABC transporter ATP-binding protein;protein_id=WP_022648294.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 134689 135603 . + . ID=gene-VMS06_RS13055;Name=VMS06_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13055 NZ_JAVXZI010000010.1 Protein Homology CDS 134689 135603 . + 0 ID=cds-WP_023300241.1;Parent=gene-VMS06_RS13055;Dbxref=GenBank:WP_023300241.1;Name=WP_023300241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006175591.1;locus_tag=VMS06_RS13055;product=OmpG family monomeric porin;protein_id=WP_023300241.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 135637 136647 . - . ID=gene-VMS06_RS13060;Name=VMS06_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13060 NZ_JAVXZI010000010.1 Protein Homology CDS 135637 136647 . - 0 ID=cds-WP_022648292.1;Parent=gene-VMS06_RS13060;Dbxref=GenBank:WP_022648292.1;Name=WP_022648292.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006175590.1;locus_tag=VMS06_RS13060;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_022648292.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 136803 138200 . + . ID=gene-VMS06_RS13065;Name=VMS06_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13065 NZ_JAVXZI010000010.1 Protein Homology CDS 136803 138200 . + 0 ID=cds-WP_063147241.1;Parent=gene-VMS06_RS13065;Dbxref=GenBank:WP_063147241.1;Name=WP_063147241.1;Ontology_term=GO:0003924,GO:0005525,GO:0019003;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,GDP binding|0019003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=VMS06_RS13065;product=YcjX family GTP-binding protein;protein_id=WP_063147241.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 138197 139249 . + . ID=gene-VMS06_RS13070;Name=VMS06_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13070 NZ_JAVXZI010000010.1 Protein Homology CDS 138197 139249 . + 0 ID=cds-WP_063147243.1;Parent=gene-VMS06_RS13070;Dbxref=GenBank:WP_063147243.1;Name=WP_063147243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856885.1;locus_tag=VMS06_RS13070;product=YcjF family protein;protein_id=WP_063147243.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 139361 140902 . + . ID=gene-VMS06_RS13075;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=VMS06_RS13075 NZ_JAVXZI010000010.1 Protein Homology CDS 139361 140902 . + 0 ID=cds-WP_323630670.1;Parent=gene-VMS06_RS13075;Dbxref=GenBank:WP_323630670.1;Name=WP_323630670.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460641.1;locus_tag=VMS06_RS13075;product=transcriptional regulator TyrR;protein_id=WP_323630670.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 140937 141443 . - . ID=gene-VMS06_RS13080;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=VMS06_RS13080 NZ_JAVXZI010000010.1 Protein Homology CDS 140937 141443 . - 0 ID=cds-WP_003856889.1;Parent=gene-VMS06_RS13080;Dbxref=GenBank:WP_003856889.1;Name=WP_003856889.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309930.1;locus_tag=VMS06_RS13080;product=thiol peroxidase;protein_id=WP_003856889.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 141550 142515 . + . ID=gene-VMS06_RS13085;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=VMS06_RS13085 NZ_JAVXZI010000010.1 Protein Homology CDS 141550 142515 . + 0 ID=cds-WP_063147249.1;Parent=gene-VMS06_RS13085;Dbxref=GenBank:WP_063147249.1;Name=WP_063147249.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309931.2;locus_tag=VMS06_RS13085;product=L-Ala-D/L-Glu epimerase;protein_id=WP_063147249.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 142506 143219 . - . ID=gene-VMS06_RS13090;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=VMS06_RS13090 NZ_JAVXZI010000010.1 Protein Homology CDS 142506 143219 . - 0 ID=cds-WP_022648287.1;Parent=gene-VMS06_RS13090;Dbxref=GenBank:WP_022648287.1;Name=WP_022648287.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501258.1;locus_tag=VMS06_RS13090;product=murein tripeptide amidase MpaA;protein_id=WP_022648287.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 143403 145019 . + . ID=gene-VMS06_RS13095;Name=VMS06_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13095 NZ_JAVXZI010000010.1 Protein Homology CDS 143403 145019 . + 0 ID=cds-WP_063147251.1;Parent=gene-VMS06_RS13095;Dbxref=GenBank:WP_063147251.1;Name=WP_063147251.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415845.2;locus_tag=VMS06_RS13095;product=peptide ABC transporter substrate-binding protein;protein_id=WP_063147251.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 145632 146123 . + . ID=gene-VMS06_RS13100;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=VMS06_RS13100 NZ_JAVXZI010000010.1 Protein Homology CDS 145632 146123 . + 0 ID=cds-WP_023300236.1;Parent=gene-VMS06_RS13100;Dbxref=GenBank:WP_023300236.1;Name=WP_023300236.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226597.1;locus_tag=VMS06_RS13100;product=type VI secretion system contractile sheath small subunit;protein_id=WP_023300236.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 146158 147699 . + . ID=gene-VMS06_RS13105;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=VMS06_RS13105 NZ_JAVXZI010000010.1 Protein Homology CDS 146158 147699 . + 0 ID=cds-WP_072202206.1;Parent=gene-VMS06_RS13105;Dbxref=GenBank:WP_072202206.1;Name=WP_072202206.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178108.1;locus_tag=VMS06_RS13105;product=type VI secretion system contractile sheath large subunit;protein_id=WP_072202206.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 147715 149055 . + . ID=gene-VMS06_RS13110;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=VMS06_RS13110 NZ_JAVXZI010000010.1 Protein Homology CDS 147715 149055 . + 0 ID=cds-WP_022648283.1;Parent=gene-VMS06_RS13110;Dbxref=GenBank:WP_022648283.1;Name=WP_022648283.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810798.1;locus_tag=VMS06_RS13110;product=type VI secretion system baseplate subunit TssK;protein_id=WP_022648283.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 149052 149741 . + . ID=gene-VMS06_RS13115;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=VMS06_RS13115 NZ_JAVXZI010000010.1 Protein Homology CDS 149052 149741 . + 0 ID=cds-WP_063147252.1;Parent=gene-VMS06_RS13115;Dbxref=GenBank:WP_063147252.1;Name=WP_063147252.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323825.1;locus_tag=VMS06_RS13115;product=type VI secretion system protein TssL%2C short form;protein_id=WP_063147252.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 149738 151444 . + . ID=gene-VMS06_RS13120;Name=VMS06_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13120 NZ_JAVXZI010000010.1 Protein Homology CDS 149738 151444 . + 0 ID=cds-WP_038416146.1;Parent=gene-VMS06_RS13120;Dbxref=GenBank:WP_038416146.1;Name=WP_038416146.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570417.1;locus_tag=VMS06_RS13120;product=OmpA family protein;protein_id=WP_038416146.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 151450 151941 . + . ID=gene-VMS06_RS13125;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=VMS06_RS13125 NZ_JAVXZI010000010.1 Protein Homology CDS 151450 151941 . + 0 ID=cds-WP_009653685.1;Parent=gene-VMS06_RS13125;Dbxref=GenBank:WP_009653685.1;Name=WP_009653685.1;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=VMS06_RS13125;product=type VI secretion system effector Hcp;protein_id=WP_009653685.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 152114 154759 . + . ID=gene-VMS06_RS13130;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=VMS06_RS13130 NZ_JAVXZI010000010.1 Protein Homology CDS 152114 154759 . + 0 ID=cds-WP_063147254.1;Parent=gene-VMS06_RS13130;Dbxref=GenBank:WP_063147254.1;Name=WP_063147254.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016154475.1;locus_tag=VMS06_RS13130;product=type VI secretion system ATPase TssH;protein_id=WP_063147254.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 154756 157128 . + . ID=gene-VMS06_RS13135;Name=VMS06_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13135 NZ_JAVXZI010000010.1 Protein Homology CDS 154756 157128 . + 0 ID=cds-WP_063147255.1;Parent=gene-VMS06_RS13135;Dbxref=GenBank:WP_063147255.1;Name=WP_063147255.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382242.1;locus_tag=VMS06_RS13135;product=type VI secretion system Vgr family protein;protein_id=WP_063147255.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 157144 157410 . + . ID=gene-VMS06_RS13140;Name=VMS06_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13140 NZ_JAVXZI010000010.1 GeneMarkS-2+ CDS 157144 157410 . + 0 ID=cds-WP_022648278.1;Parent=gene-VMS06_RS13140;Dbxref=GenBank:WP_022648278.1;Name=WP_022648278.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS13140;product=PAAR domain-containing protein;protein_id=WP_022648278.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 157457 160225 . + . ID=gene-VMS06_RS13145;Name=VMS06_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13145 NZ_JAVXZI010000010.1 Protein Homology CDS 157457 160225 . + 0 ID=cds-WP_063147256.1;Parent=gene-VMS06_RS13145;Dbxref=GenBank:WP_063147256.1;Name=WP_063147256.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041559.1;locus_tag=VMS06_RS13145;product=T6SS effector BTH_I2691 family protein;protein_id=WP_063147256.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 160222 161181 . + . ID=gene-VMS06_RS13150;Name=VMS06_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13150 NZ_JAVXZI010000010.1 Protein Homology CDS 160222 161181 . + 0 ID=cds-WP_063147257.1;Parent=gene-VMS06_RS13150;Dbxref=GenBank:WP_063147257.1;Name=WP_063147257.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041560.1;locus_tag=VMS06_RS13150;product=putative type VI secretion system effector;protein_id=WP_063147257.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 161475 162437 . + . ID=gene-VMS06_RS13155;Name=VMS06_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13155 NZ_JAVXZI010000010.1 Protein Homology CDS 161475 162437 . + 0 ID=cds-WP_063147258.1;Parent=gene-VMS06_RS13155;Dbxref=GenBank:WP_063147258.1;Name=WP_063147258.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041560.1;locus_tag=VMS06_RS13155;product=putative type VI secretion system effector;protein_id=WP_063147258.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 162649 163554 . + . ID=gene-VMS06_RS13160;Name=VMS06_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13160 NZ_JAVXZI010000010.1 GeneMarkS-2+ CDS 162649 163554 . + 0 ID=cds-WP_063147259.1;Parent=gene-VMS06_RS13160;Dbxref=GenBank:WP_063147259.1;Name=WP_063147259.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS13160;product=DUF4123 domain-containing protein;protein_id=WP_063147259.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 163606 164781 . + . ID=gene-VMS06_RS13165;Name=VMS06_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13165 NZ_JAVXZI010000010.1 GeneMarkS-2+ CDS 163606 164781 . + 0 ID=cds-WP_063147260.1;Parent=gene-VMS06_RS13165;Dbxref=GenBank:WP_063147260.1;Name=WP_063147260.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS13165;product=hypothetical protein;protein_id=WP_063147260.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 164744 168199 . + . ID=gene-VMS06_RS13170;Name=VMS06_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13170 NZ_JAVXZI010000010.1 Protein Homology CDS 164744 168199 . + 0 ID=cds-WP_311017562.1;Parent=gene-VMS06_RS13170;Dbxref=GenBank:WP_311017562.1;Name=WP_311017562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008813069.1;locus_tag=VMS06_RS13170;product=ImcF-related family protein;protein_id=WP_311017562.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 168199 169800 . + . ID=gene-VMS06_RS13175;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=VMS06_RS13175 NZ_JAVXZI010000010.1 Protein Homology CDS 168199 169800 . + 0 ID=cds-WP_323630671.1;Parent=gene-VMS06_RS13175;Dbxref=GenBank:WP_323630671.1;Name=WP_323630671.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001536305.1;locus_tag=VMS06_RS13175;product=type VI secretion system protein TssA;protein_id=WP_323630671.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 169842 171596 . + . ID=gene-VMS06_RS13180;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=VMS06_RS13180 NZ_JAVXZI010000010.1 Protein Homology CDS 169842 171596 . + 0 ID=cds-WP_045622577.1;Parent=gene-VMS06_RS13180;Dbxref=GenBank:WP_045622577.1;Name=WP_045622577.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226617.1;locus_tag=VMS06_RS13180;product=type VI secretion system baseplate subunit TssF;protein_id=WP_045622577.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 171560 172645 . + . ID=gene-VMS06_RS13185;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=VMS06_RS13185 NZ_JAVXZI010000010.1 Protein Homology CDS 171560 172645 . + 0 ID=cds-WP_063145837.1;Parent=gene-VMS06_RS13185;Dbxref=GenBank:WP_063145837.1;Name=WP_063145837.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226618.1;locus_tag=VMS06_RS13185;product=type VI secretion system baseplate subunit TssG;protein_id=WP_063145837.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 172623 173168 . + . ID=gene-VMS06_RS13190;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=VMS06_RS13190 NZ_JAVXZI010000010.1 Protein Homology CDS 172623 173168 . + 0 ID=cds-WP_032624166.1;Parent=gene-VMS06_RS13190;Dbxref=GenBank:WP_032624166.1;Name=WP_032624166.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671405.1;locus_tag=VMS06_RS13190;product=type VI secretion system lipoprotein TssJ;protein_id=WP_032624166.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 173168 173623 . + . ID=gene-VMS06_RS13195;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=VMS06_RS13195 NZ_JAVXZI010000010.1 Protein Homology CDS 173168 173623 . + 0 ID=cds-WP_063147263.1;Parent=gene-VMS06_RS13195;Dbxref=GenBank:WP_063147263.1;Name=WP_063147263.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570427.1;locus_tag=VMS06_RS13195;product=type VI secretion system baseplate subunit TssE;protein_id=WP_063147263.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 173647 174975 . + . ID=gene-VMS06_RS13200;Name=VMS06_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13200 NZ_JAVXZI010000010.1 Protein Homology CDS 173647 174975 . + 0 ID=cds-WP_063843822.1;Parent=gene-VMS06_RS13200;Dbxref=GenBank:WP_063843822.1;Name=WP_063843822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382253.1;locus_tag=VMS06_RS13200;product=VasL domain-containing protein;protein_id=WP_063843822.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 175004 175492 . + . ID=gene-VMS06_RS13205;Name=VMS06_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13205 NZ_JAVXZI010000010.1 Protein Homology CDS 175004 175492 . + 0 ID=cds-WP_063147265.1;Parent=gene-VMS06_RS13205;Dbxref=GenBank:WP_063147265.1;Name=WP_063147265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570428.1;locus_tag=VMS06_RS13205;product=hypothetical protein;protein_id=WP_063147265.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 175809 176939 . + . ID=gene-VMS06_RS13210;Name=VMS06_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13210 NZ_JAVXZI010000010.1 Protein Homology CDS 175809 176939 . + 0 ID=cds-WP_080460780.1;Parent=gene-VMS06_RS13210;Dbxref=GenBank:WP_080460780.1;Name=WP_080460780.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810775.1;locus_tag=VMS06_RS13210;product=methyl-accepting chemotaxis protein;protein_id=WP_080460780.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 177030 178013 . + . ID=gene-VMS06_RS13215;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=VMS06_RS13215 NZ_JAVXZI010000010.1 Protein Homology CDS 177030 178013 . + 0 ID=cds-WP_032624170.1;Parent=gene-VMS06_RS13215;Dbxref=GenBank:WP_032624170.1;Name=WP_032624170.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460615.1;locus_tag=VMS06_RS13215;product=zinc transporter ZntB;protein_id=WP_032624170.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 178295 178441 . + . ID=gene-VMS06_RS13220;Name=ynaL;gbkey=Gene;gene=ynaL;gene_biotype=protein_coding;locus_tag=VMS06_RS13220 NZ_JAVXZI010000010.1 Protein Homology CDS 178295 178441 . + 0 ID=cds-WP_369875049.1;Parent=gene-VMS06_RS13220;Dbxref=GenBank:WP_369875049.1;Name=WP_369875049.1;gbkey=CDS;gene=ynaL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_072001208.1;locus_tag=VMS06_RS13220;product=proline-rich small protein YnaL;protein_id=WP_369875049.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 178499 179872 . + . ID=gene-VMS06_RS13225;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=VMS06_RS13225 NZ_JAVXZI010000010.1 Protein Homology CDS 178499 179872 . + 0 ID=cds-WP_038416131.1;Parent=gene-VMS06_RS13225;Dbxref=GenBank:WP_038416131.1;Name=WP_038416131.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415859.1;locus_tag=VMS06_RS13225;product=ATP-dependent RNA helicase DbpA;protein_id=WP_038416131.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 179915 180850 . - . ID=gene-VMS06_RS13230;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=VMS06_RS13230 NZ_JAVXZI010000010.1 Protein Homology CDS 179915 180850 . - 0 ID=cds-WP_001186974.1;Parent=gene-VMS06_RS13230;Dbxref=GenBank:WP_001186974.1;Name=WP_001186974.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309955.1;locus_tag=VMS06_RS13230;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_001186974.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq pseudogene 180899 181084 . - . ID=gene-VMS06_RS13235;Name=VMS06_RS13235;end_range=181084,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS13235;partial=true;pseudo=true NZ_JAVXZI010000010.1 Protein Homology CDS 180899 181084 . - 0 ID=cds-VMS06_RS13235;Parent=gene-VMS06_RS13235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=181084,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882483.1;locus_tag=VMS06_RS13235;partial=true;product=site-specific integrase;pseudo=true;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 181166 181297 . + . ID=gene-VMS06_RS13240;Name=VMS06_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13240 NZ_JAVXZI010000010.1 GeneMarkS-2+ CDS 181166 181297 . + 0 ID=cds-WP_255409922.1;Parent=gene-VMS06_RS13240;Dbxref=GenBank:WP_255409922.1;Name=WP_255409922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS13240;product=hypothetical protein;protein_id=WP_255409922.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 181502 181699 . + . ID=gene-VMS06_RS13245;Name=VMS06_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13245 NZ_JAVXZI010000010.1 Protein Homology CDS 181502 181699 . + 0 ID=cds-WP_022648260.1;Parent=gene-VMS06_RS13245;Dbxref=GenBank:WP_022648260.1;Name=WP_022648260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856931.1;locus_tag=VMS06_RS13245;product=hypothetical protein;protein_id=WP_022648260.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 181703 182125 . + . ID=gene-VMS06_RS13250;Name=VMS06_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13250 NZ_JAVXZI010000010.1 Protein Homology CDS 181703 182125 . + 0 ID=cds-WP_023300213.1;Parent=gene-VMS06_RS13250;Dbxref=GenBank:WP_023300213.1;Name=WP_023300213.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382259.1;locus_tag=VMS06_RS13250;product=GFA family protein;protein_id=WP_023300213.1;transl_table=11 NZ_JAVXZI010000010.1 RefSeq pseudogene 182159 183184 . - . ID=gene-VMS06_RS13255;Name=ompC;end_range=183184,.;gbkey=Gene;gene=ompC;gene_biotype=pseudogene;locus_tag=VMS06_RS13255;partial=true;pseudo=true NZ_JAVXZI010000010.1 Protein Homology CDS 182159 183184 . - 0 ID=cds-VMS06_RS13255;Parent=gene-VMS06_RS13255;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0034220,GO:0015288;end_range=183184,.;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415895.1;locus_tag=VMS06_RS13255;partial=true;product=porin OmpC;pseudo=true;transl_table=11 NZ_JAVXZI010000010.1 RefSeq gene 183236 183291 . + . ID=gene-VMS06_RS22900;Name=VMS06_RS22900;end_range=183291,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22900;partial=true NZ_JAVXZI010000010.1 Protein Homology CDS 183236 183291 . + 0 ID=cds-WP_136697432.1;Parent=gene-VMS06_RS22900;Dbxref=GenBank:WP_136697432.1;Name=WP_136697432.1;Ontology_term=GO:0006313;end_range=183291,.;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF015750.6;locus_tag=VMS06_RS22900;partial=true;product=IS1 family transposase;protein_id=WP_136697432.1;transl_table=11 ##sequence-region NZ_JAVXZI010000011.1 1 172840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000011.1 RefSeq region 1 172840 . + . ID=NZ_JAVXZI010000011.1:1..172840;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000011.1 RefSeq gene 268 1614 . - . ID=gene-VMS06_RS13260;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=VMS06_RS13260 NZ_JAVXZI010000011.1 Protein Homology CDS 268 1614 . - 0 ID=cds-WP_003861615.1;Parent=gene-VMS06_RS13260;Dbxref=GenBank:WP_003861615.1;Name=WP_003861615.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462404.1;locus_tag=VMS06_RS13260;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_003861615.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 1611 2330 . - . ID=gene-VMS06_RS13265;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=VMS06_RS13265 NZ_JAVXZI010000011.1 Protein Homology CDS 1611 2330 . - 0 ID=cds-WP_001157751.1;Parent=gene-VMS06_RS13265;Dbxref=GenBank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007374840.1;locus_tag=VMS06_RS13265;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 2559 3032 . + . ID=gene-VMS06_RS13270;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=VMS06_RS13270 NZ_JAVXZI010000011.1 Protein Homology CDS 2559 3032 . + 0 ID=cds-WP_022649631.1;Parent=gene-VMS06_RS13270;Dbxref=GenBank:WP_022649631.1;Name=WP_022649631.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=VMS06_RS13270;product=transcription elongation factor GreB;protein_id=WP_022649631.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 3120 5450 . + . ID=gene-VMS06_RS13275;Name=VMS06_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13275 NZ_JAVXZI010000011.1 Protein Homology CDS 3120 5450 . + 0 ID=cds-WP_046620723.1;Parent=gene-VMS06_RS13275;Dbxref=GenBank:WP_046620723.1;Name=WP_046620723.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229229.1;locus_tag=VMS06_RS13275;product=Tex family protein;protein_id=WP_046620723.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 5787 6014 . + . ID=gene-VMS06_RS13280;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=VMS06_RS13280 NZ_JAVXZI010000011.1 Protein Homology CDS 5787 6014 . + 0 ID=cds-WP_022649633.1;Parent=gene-VMS06_RS13280;Dbxref=GenBank:WP_022649633.1;Name=WP_022649633.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126281.1;locus_tag=VMS06_RS13280;product=ferrous iron transporter A;protein_id=WP_022649633.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 6045 8363 . + . ID=gene-VMS06_RS13285;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=VMS06_RS13285 NZ_JAVXZI010000011.1 Protein Homology CDS 6045 8363 . + 0 ID=cds-WP_063138079.1;Parent=gene-VMS06_RS13285;Dbxref=GenBank:WP_063138079.1;Name=WP_063138079.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229231.1;locus_tag=VMS06_RS13285;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_063138079.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 8375 8611 . + . ID=gene-VMS06_RS13290;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=VMS06_RS13290 NZ_JAVXZI010000011.1 Protein Homology CDS 8375 8611 . + 0 ID=cds-WP_063138080.1;Parent=gene-VMS06_RS13290;Dbxref=GenBank:WP_063138080.1;Name=WP_063138080.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312279.1;locus_tag=VMS06_RS13290;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_063138080.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 8586 9368 . - . ID=gene-VMS06_RS13295;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=VMS06_RS13295 NZ_JAVXZI010000011.1 Protein Homology CDS 8586 9368 . - 0 ID=cds-WP_063843865.1;Parent=gene-VMS06_RS13295;Dbxref=GenBank:WP_063843865.1;Name=WP_063843865.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855414.1;locus_tag=VMS06_RS13295;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_063843865.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 9405 10085 . + . ID=gene-VMS06_RS13300;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=VMS06_RS13300 NZ_JAVXZI010000011.1 Protein Homology CDS 9405 10085 . + 0 ID=cds-WP_063138082.1;Parent=gene-VMS06_RS13300;Dbxref=GenBank:WP_063138082.1;Name=WP_063138082.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958738.1;locus_tag=VMS06_RS13300;product=DNA utilization protein GntX;protein_id=WP_063138082.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 10147 10722 . + . ID=gene-VMS06_RS13305;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=VMS06_RS13305 NZ_JAVXZI010000011.1 Protein Homology CDS 10147 10722 . + 0 ID=cds-WP_003861601.1;Parent=gene-VMS06_RS13305;Dbxref=GenBank:WP_003861601.1;Name=WP_003861601.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=VMS06_RS13305;product=Fe-S biogenesis protein NfuA;protein_id=WP_003861601.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 11028 12344 . + . ID=gene-VMS06_RS13310;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=VMS06_RS13310 NZ_JAVXZI010000011.1 Protein Homology CDS 11028 12344 . + 0 ID=cds-WP_023298788.1;Parent=gene-VMS06_RS13310;Dbxref=GenBank:WP_023298788.1;Name=WP_023298788.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462415.1;locus_tag=VMS06_RS13310;product=gluconate transporter;protein_id=WP_023298788.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 12456 14534 . - . ID=gene-VMS06_RS13315;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=VMS06_RS13315 NZ_JAVXZI010000011.1 Protein Homology CDS 12456 14534 . - 0 ID=cds-WP_045622173.1;Parent=gene-VMS06_RS13315;Dbxref=GenBank:WP_045622173.1;Name=WP_045622173.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885547.1;locus_tag=VMS06_RS13315;product=4-alpha-glucanotransferase;protein_id=WP_045622173.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 14544 16937 . - . ID=gene-VMS06_RS13320;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=VMS06_RS13320 NZ_JAVXZI010000011.1 Protein Homology CDS 14544 16937 . - 0 ID=cds-WP_063148126.1;Parent=gene-VMS06_RS13320;Dbxref=GenBank:WP_063148126.1;Name=WP_063148126.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462417.1;locus_tag=VMS06_RS13320;product=maltodextrin phosphorylase;protein_id=WP_063148126.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 17510 20215 . + . ID=gene-VMS06_RS13325;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=VMS06_RS13325 NZ_JAVXZI010000011.1 Protein Homology CDS 17510 20215 . + 0 ID=cds-WP_022649640.1;Parent=gene-VMS06_RS13325;Dbxref=GenBank:WP_022649640.1;Name=WP_022649640.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=VMS06_RS13325;product=HTH-type transcriptional regulator MalT;protein_id=WP_022649640.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 20313 21071 . - . ID=gene-VMS06_RS13330;Name=VMS06_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13330 NZ_JAVXZI010000011.1 Protein Homology CDS 20313 21071 . - 0 ID=cds-WP_022649641.1;Parent=gene-VMS06_RS13330;Dbxref=GenBank:WP_022649641.1;Name=WP_022649641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=VMS06_RS13330;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_022649641.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 21088 21918 . - . ID=gene-VMS06_RS13335;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=VMS06_RS13335 NZ_JAVXZI010000011.1 Protein Homology CDS 21088 21918 . - 0 ID=cds-WP_022649642.1;Parent=gene-VMS06_RS13335;Dbxref=GenBank:WP_022649642.1;Name=WP_022649642.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462426.1;locus_tag=VMS06_RS13335;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_022649642.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 21966 22298 . - . ID=gene-VMS06_RS13340;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=VMS06_RS13340 NZ_JAVXZI010000011.1 Protein Homology CDS 21966 22298 . - 0 ID=cds-WP_022649643.1;Parent=gene-VMS06_RS13340;Dbxref=GenBank:WP_022649643.1;Name=WP_022649643.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503062.1;locus_tag=VMS06_RS13340;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_022649643.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 22549 24057 . + . ID=gene-VMS06_RS13345;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=VMS06_RS13345 NZ_JAVXZI010000011.1 Protein Homology CDS 22549 24057 . + 0 ID=cds-WP_023298790.1;Parent=gene-VMS06_RS13345;Dbxref=GenBank:WP_023298790.1;Name=WP_023298790.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229244.1;locus_tag=VMS06_RS13345;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_023298790.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 24149 26596 . - . ID=gene-VMS06_RS13350;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=VMS06_RS13350 NZ_JAVXZI010000011.1 Protein Homology CDS 24149 26596 . - 0 ID=cds-WP_023307123.1;Parent=gene-VMS06_RS13350;Dbxref=GenBank:WP_023307123.1;Name=WP_023307123.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436446.1;locus_tag=VMS06_RS13350;product=glycogen phosphorylase;protein_id=WP_023307123.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 26615 28048 . - . ID=gene-VMS06_RS13355;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=VMS06_RS13355 NZ_JAVXZI010000011.1 Protein Homology CDS 26615 28048 . - 0 ID=cds-WP_022649646.1;Parent=gene-VMS06_RS13355;Dbxref=GenBank:WP_022649646.1;Name=WP_022649646.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013099109.1;locus_tag=VMS06_RS13355;product=glycogen synthase GlgA;protein_id=WP_022649646.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 28048 29343 . - . ID=gene-VMS06_RS13360;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=VMS06_RS13360 NZ_JAVXZI010000011.1 Protein Homology CDS 28048 29343 . - 0 ID=cds-WP_003861582.1;Parent=gene-VMS06_RS13360;Dbxref=GenBank:WP_003861582.1;Name=WP_003861582.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229248.1;locus_tag=VMS06_RS13360;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_003861582.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 29361 31334 . - . ID=gene-VMS06_RS13365;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=VMS06_RS13365 NZ_JAVXZI010000011.1 Protein Homology CDS 29361 31334 . - 0 ID=cds-WP_063148123.1;Parent=gene-VMS06_RS13365;Dbxref=GenBank:WP_063148123.1;Name=WP_063148123.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417889.1;locus_tag=VMS06_RS13365;product=glycogen debranching protein GlgX;protein_id=WP_063148123.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 31331 33517 . - . ID=gene-VMS06_RS13370;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=VMS06_RS13370 NZ_JAVXZI010000011.1 Protein Homology CDS 31331 33517 . - 0 ID=cds-WP_023298793.1;Parent=gene-VMS06_RS13370;Dbxref=GenBank:WP_023298793.1;Name=WP_023298793.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417890.1;locus_tag=VMS06_RS13370;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_023298793.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 33757 34860 . - . ID=gene-VMS06_RS13375;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=VMS06_RS13375 NZ_JAVXZI010000011.1 Protein Homology CDS 33757 34860 . - 0 ID=cds-WP_022649649.1;Parent=gene-VMS06_RS13375;Dbxref=GenBank:WP_022649649.1;Name=WP_022649649.1;Ontology_term=GO:0009088,GO:0009089,GO:0009097,GO:0071265,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=L-threonine biosynthetic process|0009088||IEA,L-lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA,L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229251.1;locus_tag=VMS06_RS13375;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_022649649.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 35039 35632 . + . ID=gene-VMS06_RS13380;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=VMS06_RS13380 NZ_JAVXZI010000011.1 Protein Homology CDS 35039 35632 . + 0 ID=cds-WP_003861574.1;Parent=gene-VMS06_RS13380;Dbxref=GenBank:WP_003861574.1;Name=WP_003861574.1;gbkey=CDS;gene=yhgN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312306.1;locus_tag=VMS06_RS13380;product=NAAT family transporter YhgN;protein_id=WP_003861574.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 35738 37078 . - . ID=gene-VMS06_RS13385;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=VMS06_RS13385 NZ_JAVXZI010000011.1 Protein Homology CDS 35738 37078 . - 0 ID=cds-WP_017693851.1;Parent=gene-VMS06_RS13385;Dbxref=GenBank:WP_017693851.1;Name=WP_017693851.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229253.1;locus_tag=VMS06_RS13385;product=gluconate transporter;protein_id=WP_017693851.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 37082 37609 . - . ID=gene-VMS06_RS13390;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=VMS06_RS13390 NZ_JAVXZI010000011.1 Protein Homology CDS 37082 37609 . - 0 ID=cds-WP_003861569.1;Parent=gene-VMS06_RS13390;Dbxref=GenBank:WP_003861569.1;Name=WP_003861569.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861569.1;locus_tag=VMS06_RS13390;product=gluconokinase;protein_id=WP_003861569.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 37736 38731 . - . ID=gene-VMS06_RS13395;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=VMS06_RS13395 NZ_JAVXZI010000011.1 Protein Homology CDS 37736 38731 . - 0 ID=cds-WP_063148121.1;Parent=gene-VMS06_RS13395;Dbxref=GenBank:WP_063148121.1;Name=WP_063148121.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=VMS06_RS13395;product=gluconate operon transcriptional repressor GntR;protein_id=WP_063148121.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 38823 39518 . - . ID=gene-VMS06_RS13400;Name=VMS06_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13400 NZ_JAVXZI010000011.1 Protein Homology CDS 38823 39518 . - 0 ID=cds-WP_003861565.1;Parent=gene-VMS06_RS13400;Dbxref=GenBank:WP_003861565.1;Name=WP_003861565.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=VMS06_RS13400;product=pirin family protein;protein_id=WP_003861565.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 39642 40679 . - . ID=gene-VMS06_RS13405;Name=VMS06_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13405 NZ_JAVXZI010000011.1 Protein Homology CDS 39642 40679 . - 0 ID=cds-WP_022649651.1;Parent=gene-VMS06_RS13405;Dbxref=GenBank:WP_022649651.1;Name=WP_022649651.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417897.1;locus_tag=VMS06_RS13405;product=oxidoreductase;protein_id=WP_022649651.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 40937 41425 . + . ID=gene-VMS06_RS13410;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=VMS06_RS13410 NZ_JAVXZI010000011.1 Protein Homology CDS 40937 41425 . + 0 ID=cds-WP_023298796.1;Parent=gene-VMS06_RS13410;Dbxref=GenBank:WP_023298796.1;Name=WP_023298796.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=VMS06_RS13410;product=N-acetyltransferase;protein_id=WP_023298796.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 41526 43271 . - . ID=gene-VMS06_RS13415;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=VMS06_RS13415 NZ_JAVXZI010000011.1 Protein Homology CDS 41526 43271 . - 0 ID=cds-WP_072201895.1;Parent=gene-VMS06_RS13415;Dbxref=GenBank:WP_072201895.1;Name=WP_072201895.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione gamma-glutamate hydrolase|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229260.1;locus_tag=VMS06_RS13415;product=gamma-glutamyltransferase;protein_id=WP_072201895.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 43394 43765 . + . ID=gene-VMS06_RS13420;Name=VMS06_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13420 NZ_JAVXZI010000011.1 Protein Homology CDS 43394 43765 . + 0 ID=cds-WP_022649654.1;Parent=gene-VMS06_RS13420;Dbxref=GenBank:WP_022649654.1;Name=WP_022649654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861557.1;locus_tag=VMS06_RS13420;product=DUF2756 family protein;protein_id=WP_022649654.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 43755 44495 . - . ID=gene-VMS06_RS13425;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=VMS06_RS13425 NZ_JAVXZI010000011.1 Protein Homology CDS 43755 44495 . - 0 ID=cds-WP_063148120.1;Parent=gene-VMS06_RS13425;Dbxref=GenBank:WP_063148120.1;Name=WP_063148120.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861556.1;locus_tag=VMS06_RS13425;product=glycerophosphodiester phosphodiesterase;protein_id=WP_063148120.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 44492 45562 . - . ID=gene-VMS06_RS13430;Name=VMS06_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13430 NZ_JAVXZI010000011.1 Protein Homology CDS 44492 45562 . - 0 ID=cds-WP_003861554.1;Parent=gene-VMS06_RS13430;Dbxref=GenBank:WP_003861554.1;Name=WP_003861554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312323.2;locus_tag=VMS06_RS13430;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_003861554.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 45564 46409 . - . ID=gene-VMS06_RS13435;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=VMS06_RS13435 NZ_JAVXZI010000011.1 Protein Homology CDS 45564 46409 . - 0 ID=cds-WP_023298800.1;Parent=gene-VMS06_RS13435;Dbxref=GenBank:WP_023298800.1;Name=WP_023298800.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=VMS06_RS13435;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_023298800.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 46406 47293 . - . ID=gene-VMS06_RS13440;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=VMS06_RS13440 NZ_JAVXZI010000011.1 Protein Homology CDS 46406 47293 . - 0 ID=cds-WP_003861551.1;Parent=gene-VMS06_RS13440;Dbxref=GenBank:WP_003861551.1;Name=WP_003861551.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=VMS06_RS13440;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_003861551.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 47423 48739 . - . ID=gene-VMS06_RS13445;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=VMS06_RS13445 NZ_JAVXZI010000011.1 Protein Homology CDS 47423 48739 . - 0 ID=cds-WP_032626829.1;Parent=gene-VMS06_RS13445;Dbxref=GenBank:WP_032626829.1;Name=WP_032626829.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229266.1;locus_tag=VMS06_RS13445;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_032626829.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 48986 49699 . - . ID=gene-VMS06_RS13450;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=VMS06_RS13450 NZ_JAVXZI010000011.1 Protein Homology CDS 48986 49699 . - 0 ID=cds-WP_023298801.1;Parent=gene-VMS06_RS13450;Dbxref=GenBank:WP_023298801.1;Name=WP_023298801.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462461.1;locus_tag=VMS06_RS13450;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_023298801.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 49701 50468 . - . ID=gene-VMS06_RS13455;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=VMS06_RS13455 NZ_JAVXZI010000011.1 Protein Homology CDS 49701 50468 . - 0 ID=cds-WP_022649661.1;Parent=gene-VMS06_RS13455;Dbxref=GenBank:WP_022649661.1;Name=WP_022649661.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=VMS06_RS13455;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_022649661.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 50465 51742 . - . ID=gene-VMS06_RS13460;Name=VMS06_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13460 NZ_JAVXZI010000011.1 Protein Homology CDS 50465 51742 . - 0 ID=cds-WP_045622187.1;Parent=gene-VMS06_RS13460;Dbxref=GenBank:WP_045622187.1;Name=WP_045622187.1;Ontology_term=GO:0015658,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000803755.1;locus_tag=VMS06_RS13460;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_045622187.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 51739 52665 . - . ID=gene-VMS06_RS13465;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=VMS06_RS13465 NZ_JAVXZI010000011.1 Protein Homology CDS 51739 52665 . - 0 ID=cds-WP_022649662.1;Parent=gene-VMS06_RS13465;Dbxref=GenBank:WP_022649662.1;Name=WP_022649662.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=VMS06_RS13465;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_022649662.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 52712 53821 . - . ID=gene-VMS06_RS13470;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=VMS06_RS13470 NZ_JAVXZI010000011.1 Protein Homology CDS 52712 53821 . - 0 ID=cds-WP_063148119.1;Parent=gene-VMS06_RS13470;Dbxref=GenBank:WP_063148119.1;Name=WP_063148119.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417915.1;locus_tag=VMS06_RS13470;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_063148119.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 54246 54629 . + . ID=gene-VMS06_RS13475;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=VMS06_RS13475 NZ_JAVXZI010000011.1 Protein Homology CDS 54246 54629 . + 0 ID=cds-WP_022649664.1;Parent=gene-VMS06_RS13475;Dbxref=GenBank:WP_022649664.1;Name=WP_022649664.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312333.1;locus_tag=VMS06_RS13475;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_022649664.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 54830 55930 . - . ID=gene-VMS06_RS13480;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=VMS06_RS13480 NZ_JAVXZI010000011.1 Protein Homology CDS 54830 55930 . - 0 ID=cds-WP_015571474.1;Parent=gene-VMS06_RS13480;Dbxref=GenBank:WP_015571474.1;Name=WP_015571474.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026223.1;locus_tag=VMS06_RS13480;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_015571474.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 56128 57393 . - . ID=gene-VMS06_RS13485;Name=VMS06_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13485 NZ_JAVXZI010000011.1 Protein Homology CDS 56128 57393 . - 0 ID=cds-WP_063148118.1;Parent=gene-VMS06_RS13485;Dbxref=GenBank:WP_063148118.1;Name=WP_063148118.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884543.1;locus_tag=VMS06_RS13485;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_063148118.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 57530 58387 . - . ID=gene-VMS06_RS13490;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=VMS06_RS13490 NZ_JAVXZI010000011.1 Protein Homology CDS 57530 58387 . - 0 ID=cds-WP_000159624.1;Parent=gene-VMS06_RS13490;Dbxref=GenBank:WP_000159624.1;Name=WP_000159624.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=VMS06_RS13490;product=RNA polymerase sigma factor RpoH;protein_id=WP_000159624.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 58638 59693 . - . ID=gene-VMS06_RS13495;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=VMS06_RS13495 NZ_JAVXZI010000011.1 Protein Homology CDS 58638 59693 . - 0 ID=cds-WP_022649667.1;Parent=gene-VMS06_RS13495;Dbxref=GenBank:WP_022649667.1;Name=WP_022649667.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462470.1;locus_tag=VMS06_RS13495;product=permease-like cell division protein FtsX;protein_id=WP_022649667.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 59686 60351 . - . ID=gene-VMS06_RS13500;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=VMS06_RS13500 NZ_JAVXZI010000011.1 Protein Homology CDS 59686 60351 . - 0 ID=cds-WP_006812284.1;Parent=gene-VMS06_RS13500;Dbxref=GenBank:WP_006812284.1;Name=WP_006812284.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817617.1;locus_tag=VMS06_RS13500;product=cell division ATP-binding protein FtsE;protein_id=WP_006812284.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 60354 61814 . - . ID=gene-VMS06_RS13505;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=VMS06_RS13505 NZ_JAVXZI010000011.1 Protein Homology CDS 60354 61814 . - 0 ID=cds-WP_063148117.1;Parent=gene-VMS06_RS13505;Dbxref=GenBank:WP_063148117.1;Name=WP_063148117.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436503.1;locus_tag=VMS06_RS13505;product=signal recognition particle-docking protein FtsY;protein_id=WP_063148117.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 61941 62543 . + . ID=gene-VMS06_RS13510;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=VMS06_RS13510 NZ_JAVXZI010000011.1 Protein Homology CDS 61941 62543 . + 0 ID=cds-WP_022649669.1;Parent=gene-VMS06_RS13510;Dbxref=GenBank:WP_022649669.1;Name=WP_022649669.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571477.1;locus_tag=VMS06_RS13510;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_022649669.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 62527 62808 . + . ID=gene-VMS06_RS13515;Name=VMS06_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13515 NZ_JAVXZI010000011.1 Protein Homology CDS 62527 62808 . + 0 ID=cds-WP_046620682.1;Parent=gene-VMS06_RS13515;Dbxref=GenBank:WP_046620682.1;Name=WP_046620682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571478.1;locus_tag=VMS06_RS13515;product=DUF1145 family protein;protein_id=WP_046620682.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 62896 63255 . - . ID=gene-VMS06_RS13520;Name=VMS06_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13520 NZ_JAVXZI010000011.1 Protein Homology CDS 62896 63255 . - 0 ID=cds-WP_022649671.1;Parent=gene-VMS06_RS13520;Dbxref=GenBank:WP_022649671.1;Name=WP_022649671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003827560.1;locus_tag=VMS06_RS13520;product=DUF2500 domain-containing protein;protein_id=WP_022649671.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 63385 64011 . + . ID=gene-VMS06_RS13525;Name=VMS06_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13525 NZ_JAVXZI010000011.1 Protein Homology CDS 63385 64011 . + 0 ID=cds-WP_022649672.1;Parent=gene-VMS06_RS13525;Dbxref=GenBank:WP_022649672.1;Name=WP_022649672.1;Ontology_term=GO:0006629,GO:0016787,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462476.1;locus_tag=VMS06_RS13525;product=lysoplasmalogenase;protein_id=WP_022649672.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 64088 66259 . + . ID=gene-VMS06_RS13530;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=VMS06_RS13530 NZ_JAVXZI010000011.1 Protein Homology CDS 64088 66259 . + 0 ID=cds-WP_063148116.1;Parent=gene-VMS06_RS13530;Dbxref=GenBank:WP_063148116.1;Name=WP_063148116.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882107.1;locus_tag=VMS06_RS13530;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_063148116.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 66349 67635 . - . ID=gene-VMS06_RS13535;Name=VMS06_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13535 NZ_JAVXZI010000011.1 Protein Homology CDS 66349 67635 . - 0 ID=cds-WP_022649674.1;Parent=gene-VMS06_RS13535;Dbxref=GenBank:WP_022649674.1;Name=WP_022649674.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812291.1;locus_tag=VMS06_RS13535;product=TRAP transporter large permease;protein_id=WP_022649674.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 67646 68155 . - . ID=gene-VMS06_RS13540;Name=VMS06_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13540 NZ_JAVXZI010000011.1 Protein Homology CDS 67646 68155 . - 0 ID=cds-WP_023298808.1;Parent=gene-VMS06_RS13540;Dbxref=GenBank:WP_023298808.1;Name=WP_023298808.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013099148.1;locus_tag=VMS06_RS13540;product=TRAP transporter small permease;protein_id=WP_023298808.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 68168 69139 . - . ID=gene-VMS06_RS13545;Name=VMS06_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13545 NZ_JAVXZI010000011.1 Protein Homology CDS 68168 69139 . - 0 ID=cds-WP_022649675.1;Parent=gene-VMS06_RS13545;Dbxref=GenBank:WP_022649675.1;Name=WP_022649675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858957.1;locus_tag=VMS06_RS13545;product=TRAP transporter substrate-binding protein;protein_id=WP_022649675.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 69374 69616 . - . ID=gene-VMS06_RS13550;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=VMS06_RS13550 NZ_JAVXZI010000011.1 Protein Homology CDS 69374 69616 . - 0 ID=cds-WP_000130627.1;Parent=gene-VMS06_RS13550;Dbxref=GenBank:WP_000130627.1;Name=WP_000130627.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812292.1;locus_tag=VMS06_RS13550;product=sulfurtransferase TusA;protein_id=WP_000130627.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 69786 70451 . + . ID=gene-VMS06_RS13555;Name=VMS06_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13555 NZ_JAVXZI010000011.1 Protein Homology CDS 69786 70451 . + 0 ID=cds-WP_063148115.1;Parent=gene-VMS06_RS13555;Dbxref=GenBank:WP_063148115.1;Name=WP_063148115.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503072.1;locus_tag=VMS06_RS13555;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_063148115.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 70524 71081 . + . ID=gene-VMS06_RS13560;Name=VMS06_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13560 NZ_JAVXZI010000011.1 Protein Homology CDS 70524 71081 . + 0 ID=cds-WP_022649677.1;Parent=gene-VMS06_RS13560;Dbxref=GenBank:WP_022649677.1;Name=WP_022649677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001245295.1;locus_tag=VMS06_RS13560;product=DcrB family lipoprotein;protein_id=WP_022649677.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 71217 72266 . + . ID=gene-VMS06_RS13565;Name=VMS06_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13565 NZ_JAVXZI010000011.1 Protein Homology CDS 71217 72266 . + 0 ID=cds-WP_003861270.1;Parent=gene-VMS06_RS13565;Dbxref=GenBank:WP_003861270.1;Name=WP_003861270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709244.1;locus_tag=VMS06_RS13565;product=AI-2E family transporter;protein_id=WP_003861270.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 72392 73114 . + . ID=gene-VMS06_RS13570;Name=VMS06_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13570 NZ_JAVXZI010000011.1 Protein Homology CDS 72392 73114 . + 0 ID=cds-WP_063148114.1;Parent=gene-VMS06_RS13570;Dbxref=GenBank:WP_063148114.1;Name=WP_063148114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693839.1;locus_tag=VMS06_RS13570;product=beta-ketoacyl synthase chain length factor;protein_id=WP_063148114.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 73111 73926 . + . ID=gene-VMS06_RS13575;Name=VMS06_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13575 NZ_JAVXZI010000011.1 Protein Homology CDS 73111 73926 . + 0 ID=cds-WP_058677289.1;Parent=gene-VMS06_RS13575;Dbxref=GenBank:WP_058677289.1;Name=WP_058677289.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833606.1;locus_tag=VMS06_RS13575;product=lysophospholipid acyltransferase family protein;protein_id=WP_058677289.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 73907 74164 . + . ID=gene-VMS06_RS13580;Name=VMS06_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13580 NZ_JAVXZI010000011.1 Protein Homology CDS 73907 74164 . + 0 ID=cds-WP_003861263.1;Parent=gene-VMS06_RS13580;Dbxref=GenBank:WP_003861263.1;Name=WP_003861263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312355.1;locus_tag=VMS06_RS13580;product=phosphopantetheine-binding protein;protein_id=WP_003861263.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 74176 74427 . + . ID=gene-VMS06_RS13585;Name=VMS06_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13585 NZ_JAVXZI010000011.1 Protein Homology CDS 74176 74427 . + 0 ID=cds-WP_022649680.1;Parent=gene-VMS06_RS13585;Dbxref=GenBank:WP_022649680.1;Name=WP_022649680.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312356.1;locus_tag=VMS06_RS13585;product=acyl carrier protein;protein_id=WP_022649680.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 74399 74998 . + . ID=gene-VMS06_RS13590;Name=VMS06_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13590 NZ_JAVXZI010000011.1 Protein Homology CDS 74399 74998 . + 0 ID=cds-WP_058677288.1;Parent=gene-VMS06_RS13590;Dbxref=GenBank:WP_058677288.1;Name=WP_058677288.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693837.1;locus_tag=VMS06_RS13590;product=COG4648 family protein;protein_id=WP_058677288.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 74991 76337 . + . ID=gene-VMS06_RS13595;Name=VMS06_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13595 NZ_JAVXZI010000011.1 Protein Homology CDS 74991 76337 . + 0 ID=cds-WP_063148113.1;Parent=gene-VMS06_RS13595;Dbxref=GenBank:WP_063148113.1;Name=WP_063148113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815047.1;locus_tag=VMS06_RS13595;product=AMP-binding protein;protein_id=WP_063148113.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 76324 76674 . + . ID=gene-VMS06_RS13600;Name=VMS06_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13600 NZ_JAVXZI010000011.1 Protein Homology CDS 76324 76674 . + 0 ID=cds-WP_022649683.1;Parent=gene-VMS06_RS13600;Dbxref=GenBank:WP_022649683.1;Name=WP_022649683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812300.1;locus_tag=VMS06_RS13600;product=ApeI family dehydratase;protein_id=WP_022649683.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 76665 78356 . + . ID=gene-VMS06_RS13605;Name=VMS06_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13605 NZ_JAVXZI010000011.1 Protein Homology CDS 76665 78356 . + 0 ID=cds-WP_038416876.1;Parent=gene-VMS06_RS13605;Dbxref=GenBank:WP_038416876.1;Name=WP_038416876.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312360.1;locus_tag=VMS06_RS13605;product=glycosyltransferase family 2 protein;protein_id=WP_038416876.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 78360 78782 . + . ID=gene-VMS06_RS13610;Name=VMS06_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13610 NZ_JAVXZI010000011.1 Protein Homology CDS 78360 78782 . + 0 ID=cds-WP_006812302.1;Parent=gene-VMS06_RS13610;Dbxref=GenBank:WP_006812302.1;Name=WP_006812302.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312361.1;locus_tag=VMS06_RS13610;product=acyl-CoA thioesterase;protein_id=WP_006812302.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 78779 79384 . + . ID=gene-VMS06_RS13615;Name=VMS06_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13615 NZ_JAVXZI010000011.1 Protein Homology CDS 78779 79384 . + 0 ID=cds-WP_045622196.1;Parent=gene-VMS06_RS13615;Dbxref=GenBank:WP_045622196.1;Name=WP_045622196.1;Ontology_term=GO:0042953,GO:0044874,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=lipoprotein transport|0042953||IEA,lipoprotein localization to outer membrane|0044874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861249.1;locus_tag=VMS06_RS13615;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_045622196.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 79353 81674 . + . ID=gene-VMS06_RS13620;Name=VMS06_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13620 NZ_JAVXZI010000011.1 Protein Homology CDS 79353 81674 . + 0 ID=cds-WP_063148112.1;Parent=gene-VMS06_RS13620;Dbxref=GenBank:WP_063148112.1;Name=WP_063148112.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812304.1;locus_tag=VMS06_RS13620;product=MMPL family transporter;protein_id=WP_063148112.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 81671 82249 . + . ID=gene-VMS06_RS13625;Name=VMS06_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13625 NZ_JAVXZI010000011.1 Protein Homology CDS 81671 82249 . + 0 ID=cds-WP_022651978.1;Parent=gene-VMS06_RS13625;Dbxref=GenBank:WP_022651978.1;Name=WP_022651978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571491.1;locus_tag=VMS06_RS13625;product=DUF3261 domain-containing protein;protein_id=WP_022651978.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 82251 83417 . + . ID=gene-VMS06_RS13630;Name=VMS06_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13630 NZ_JAVXZI010000011.1 Protein Homology CDS 82251 83417 . + 0 ID=cds-WP_063148111.1;Parent=gene-VMS06_RS13630;Dbxref=GenBank:WP_063148111.1;Name=WP_063148111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861244.1;locus_tag=VMS06_RS13630;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_063148111.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 83417 83890 . + . ID=gene-VMS06_RS13635;Name=VMS06_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13635 NZ_JAVXZI010000011.1 Protein Homology CDS 83417 83890 . + 0 ID=cds-WP_063148131.1;Parent=gene-VMS06_RS13635;Dbxref=GenBank:WP_063148131.1;Name=WP_063148131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833617.1;locus_tag=VMS06_RS13635;product=hotdog family protein;protein_id=WP_063148131.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 83884 84615 . + . ID=gene-VMS06_RS13640;Name=VMS06_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13640 NZ_JAVXZI010000011.1 Protein Homology CDS 83884 84615 . + 0 ID=cds-WP_032626847.1;Parent=gene-VMS06_RS13640;Dbxref=GenBank:WP_032626847.1;Name=WP_032626847.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312367.1;locus_tag=VMS06_RS13640;product=3-ketoacyl-ACP reductase FabG2;protein_id=WP_032626847.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 84612 85841 . + . ID=gene-VMS06_RS13645;Name=VMS06_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13645 NZ_JAVXZI010000011.1 Protein Homology CDS 84612 85841 . + 0 ID=cds-WP_023298820.1;Parent=gene-VMS06_RS13645;Dbxref=GenBank:WP_023298820.1;Name=WP_023298820.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369662.1;locus_tag=VMS06_RS13645;product=beta-ketoacyl-ACP synthase;protein_id=WP_023298820.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 85844 86437 . + . ID=gene-VMS06_RS13650;Name=acpT;gbkey=Gene;gene=acpT;gene_biotype=protein_coding;locus_tag=VMS06_RS13650 NZ_JAVXZI010000011.1 Protein Homology CDS 85844 86437 . + 0 ID=cds-WP_022649693.1;Parent=gene-VMS06_RS13650;Dbxref=GenBank:WP_022649693.1;Name=WP_022649693.1;gbkey=CDS;gene=acpT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384106.1;locus_tag=VMS06_RS13650;product=4'-phosphopantetheinyl transferase AcpT;protein_id=WP_022649693.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 86497 87003 . - . ID=gene-VMS06_RS13655;Name=VMS06_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13655 NZ_JAVXZI010000011.1 Protein Homology CDS 86497 87003 . - 0 ID=cds-WP_323630673.1;Parent=gene-VMS06_RS13655;Dbxref=GenBank:WP_323630673.1;Name=WP_323630673.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019078109.1;locus_tag=VMS06_RS13655;product=phenolic acid decarboxylase;protein_id=WP_323630673.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 87103 87984 . + . ID=gene-VMS06_RS13660;Name=VMS06_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13660 NZ_JAVXZI010000011.1 Protein Homology CDS 87103 87984 . + 0 ID=cds-WP_023298821.1;Parent=gene-VMS06_RS13660;Dbxref=GenBank:WP_023298821.1;Name=WP_023298821.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384098.1;locus_tag=VMS06_RS13660;product=LysR family transcriptional regulator;protein_id=WP_023298821.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 88017 88811 . + . ID=gene-VMS06_RS13665;Name=VMS06_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13665 NZ_JAVXZI010000011.1 Protein Homology CDS 88017 88811 . + 0 ID=cds-WP_022649696.1;Parent=gene-VMS06_RS13665;Dbxref=GenBank:WP_022649696.1;Name=WP_022649696.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704834.1;locus_tag=VMS06_RS13665;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_022649696.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 88918 89580 . + . ID=gene-VMS06_RS13670;Name=VMS06_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13670 NZ_JAVXZI010000011.1 Protein Homology CDS 88918 89580 . + 0 ID=cds-WP_063201337.1;Parent=gene-VMS06_RS13670;Dbxref=GenBank:WP_063201337.1;Name=WP_063201337.1;Ontology_term=GO:0016311,GO:0016791,GO:0046872;gbkey=CDS;go_function=phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861228.1;locus_tag=VMS06_RS13670;product=HAD family hydrolase;protein_id=WP_063201337.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 89664 90689 . - . ID=gene-VMS06_RS13675;Name=VMS06_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13675 NZ_JAVXZI010000011.1 Protein Homology CDS 89664 90689 . - 0 ID=cds-WP_063148110.1;Parent=gene-VMS06_RS13675;Dbxref=GenBank:WP_063148110.1;Name=WP_063148110.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861227.1;locus_tag=VMS06_RS13675;product=TerC/Alx family metal homeostasis membrane protein;protein_id=WP_063148110.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 91018 92352 . + . ID=gene-VMS06_RS13680;Name=VMS06_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13680 NZ_JAVXZI010000011.1 Protein Homology CDS 91018 92352 . + 0 ID=cds-WP_045308786.1;Parent=gene-VMS06_RS13680;Dbxref=GenBank:WP_045308786.1;Name=WP_045308786.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172063.1;locus_tag=VMS06_RS13680;product=MFS transporter;protein_id=WP_045308786.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 92389 93126 . - . ID=gene-VMS06_RS13685;Name=VMS06_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13685 NZ_JAVXZI010000011.1 Protein Homology CDS 92389 93126 . - 0 ID=cds-WP_063148109.1;Parent=gene-VMS06_RS13685;Dbxref=GenBank:WP_063148109.1;Name=WP_063148109.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884507.1;locus_tag=VMS06_RS13685;product=IclR family transcriptional regulator;protein_id=WP_063148109.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 93296 93988 . + . ID=gene-VMS06_RS13690;Name=VMS06_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13690 NZ_JAVXZI010000011.1 Protein Homology CDS 93296 93988 . + 0 ID=cds-WP_022649701.1;Parent=gene-VMS06_RS13690;Dbxref=GenBank:WP_022649701.1;Name=WP_022649701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503113.1;locus_tag=VMS06_RS13690;product=RraA family protein;protein_id=WP_022649701.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 93988 94932 . + . ID=gene-VMS06_RS13695;Name=VMS06_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13695 NZ_JAVXZI010000011.1 Protein Homology CDS 93988 94932 . + 0 ID=cds-WP_045622202.1;Parent=gene-VMS06_RS13695;Dbxref=GenBank:WP_045622202.1;Name=WP_045622202.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812318.1;locus_tag=VMS06_RS13695;product=hydroxyacid dehydrogenase;protein_id=WP_045622202.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 95301 95735 . - . ID=gene-VMS06_RS13700;Name=pcoE;gbkey=Gene;gene=pcoE;gene_biotype=protein_coding;locus_tag=VMS06_RS13700 NZ_JAVXZI010000011.1 Protein Homology CDS 95301 95735 . - 0 ID=cds-WP_000723069.1;Parent=gene-VMS06_RS13700;Dbxref=GenBank:WP_000723069.1;Name=WP_000723069.1;gbkey=CDS;gene=pcoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000723069.1;locus_tag=VMS06_RS13700;product=copper resistance system metallochaperone PcoE;protein_id=WP_000723069.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 95953 97353 . - . ID=gene-VMS06_RS13705;Name=pcoS;gbkey=Gene;gene=pcoS;gene_biotype=protein_coding;locus_tag=VMS06_RS13705 NZ_JAVXZI010000011.1 Protein Homology CDS 95953 97353 . - 0 ID=cds-WP_001211180.1;Parent=gene-VMS06_RS13705;Dbxref=GenBank:WP_001211180.1;Name=WP_001211180.1;gbkey=CDS;gene=pcoS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001211179.1;locus_tag=VMS06_RS13705;product=copper resistance membrane spanning protein PcoS;protein_id=WP_001211180.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 97350 98030 . - . ID=gene-VMS06_RS13710;Name=pcoR;gbkey=Gene;gene=pcoR;gene_biotype=protein_coding;locus_tag=VMS06_RS13710 NZ_JAVXZI010000011.1 Protein Homology CDS 97350 98030 . - 0 ID=cds-WP_001188930.1;Parent=gene-VMS06_RS13710;Dbxref=GenBank:WP_001188930.1;Name=WP_001188930.1;gbkey=CDS;gene=pcoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239536.1;locus_tag=VMS06_RS13710;product=copper response regulator transcription factor PcoR;protein_id=WP_001188930.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 98085 98963 . - . ID=gene-VMS06_RS13715;Name=pcoD;gbkey=Gene;gene=pcoD;gene_biotype=protein_coding;locus_tag=VMS06_RS13715 NZ_JAVXZI010000011.1 Protein Homology CDS 98085 98963 . - 0 ID=cds-WP_229692861.1;Parent=gene-VMS06_RS13715;Dbxref=GenBank:WP_229692861.1;Name=WP_229692861.1;gbkey=CDS;gene=pcoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098940.1;locus_tag=VMS06_RS13715;product=copper resistance inner membrane protein PcoD;protein_id=WP_229692861.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 99019 99399 . - . ID=gene-VMS06_RS13720;Name=pcoC;gbkey=Gene;gene=pcoC;gene_biotype=protein_coding;locus_tag=VMS06_RS13720 NZ_JAVXZI010000011.1 Protein Homology CDS 99019 99399 . - 0 ID=cds-WP_000025662.1;Parent=gene-VMS06_RS13720;Dbxref=GenBank:WP_000025662.1;Name=WP_000025662.1;gbkey=CDS;gene=pcoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098941.1;locus_tag=VMS06_RS13720;product=copper resistance system metallochaperone PcoC;protein_id=WP_000025662.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 99439 100329 . - . ID=gene-VMS06_RS13725;Name=pcoB;gbkey=Gene;gene=pcoB;gene_biotype=protein_coding;locus_tag=VMS06_RS13725 NZ_JAVXZI010000011.1 Protein Homology CDS 99439 100329 . - 0 ID=cds-WP_001378118.1;Parent=gene-VMS06_RS13725;Dbxref=GenBank:WP_001378118.1;Name=WP_001378118.1;gbkey=CDS;gene=pcoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378118.1;locus_tag=VMS06_RS13725;product=copper resistance outer membrane transporter PcoB;protein_id=WP_001378118.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 100335 102152 . - . ID=gene-VMS06_RS13730;Name=pcoA;gbkey=Gene;gene=pcoA;gene_biotype=protein_coding;locus_tag=VMS06_RS13730 NZ_JAVXZI010000011.1 Protein Homology CDS 100335 102152 . - 0 ID=cds-WP_000925240.1;Parent=gene-VMS06_RS13730;Dbxref=GenBank:WP_000925240.1;Name=WP_000925240.1;gbkey=CDS;gene=pcoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480786.1;locus_tag=VMS06_RS13730;product=multicopper oxidase PcoA;protein_id=WP_000925240.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 102387 102836 . + . ID=gene-VMS06_RS13735;Name=VMS06_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13735 NZ_JAVXZI010000011.1 Protein Homology CDS 102387 102836 . + 0 ID=cds-WP_001023257.1;Parent=gene-VMS06_RS13735;Dbxref=GenBank:WP_001023257.1;Name=WP_001023257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388333.1;locus_tag=VMS06_RS13735;product=copper resistance protein;protein_id=WP_001023257.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 103125 103862 . + . ID=gene-VMS06_RS13740;Name=VMS06_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13740 NZ_JAVXZI010000011.1 Protein Homology CDS 103125 103862 . + 0 ID=cds-WP_000287501.1;Parent=gene-VMS06_RS13740;Dbxref=GenBank:WP_000287501.1;Name=WP_000287501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436617.1;locus_tag=VMS06_RS13740;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_000287501.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 103896 104093 . - . ID=gene-VMS06_RS13745;Name=VMS06_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13745 NZ_JAVXZI010000011.1 Protein Homology CDS 103896 104093 . - 0 ID=cds-WP_000843494.1;Parent=gene-VMS06_RS13745;Dbxref=GenBank:WP_000843494.1;Name=WP_000843494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843499.1;locus_tag=VMS06_RS13745;product=DUF2933 domain-containing protein;protein_id=WP_000843494.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 104134 106581 . - . ID=gene-VMS06_RS13750;Name=silP;gbkey=Gene;gene=silP;gene_biotype=protein_coding;locus_tag=VMS06_RS13750 NZ_JAVXZI010000011.1 Protein Homology CDS 104134 106581 . - 0 ID=cds-WP_001353604.1;Parent=gene-VMS06_RS13750;Dbxref=GenBank:WP_001353604.1;Name=WP_001353604.1;gbkey=CDS;gene=silP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322814.1;locus_tag=VMS06_RS13750;product=Ag(+)-translocating P-type ATPase SilP;protein_id=WP_001353604.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 106708 107148 . - . ID=gene-VMS06_RS13755;Name=VMS06_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13755 NZ_JAVXZI010000011.1 Protein Homology CDS 106708 107148 . - 0 ID=cds-WP_000758228.1;Parent=gene-VMS06_RS13755;Dbxref=GenBank:WP_000758228.1;Name=WP_000758228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436620.1;locus_tag=VMS06_RS13755;product=DUF411 domain-containing protein;protein_id=WP_000758228.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 107235 110381 . - . ID=gene-VMS06_RS13760;Name=silA;gbkey=Gene;gene=silA;gene_biotype=protein_coding;locus_tag=VMS06_RS13760 NZ_JAVXZI010000011.1 Protein Homology CDS 107235 110381 . - 0 ID=cds-WP_000574029.1;Parent=gene-VMS06_RS13760;Dbxref=GenBank:WP_000574029.1;Name=WP_000574029.1;gbkey=CDS;gene=silA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011711636.1;locus_tag=VMS06_RS13760;product=Cu(+)/Ag(+) efflux RND transporter permease subunit SilA;protein_id=WP_000574029.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 110392 111684 . - . ID=gene-VMS06_RS13765;Name=silB;gbkey=Gene;gene=silB;gene_biotype=protein_coding;locus_tag=VMS06_RS13765 NZ_JAVXZI010000011.1 Protein Homology CDS 110392 111684 . - 0 ID=cds-WP_000157620.1;Parent=gene-VMS06_RS13765;Dbxref=GenBank:WP_000157620.1;Name=WP_000157620.1;gbkey=CDS;gene=silB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146627.1;locus_tag=VMS06_RS13765;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB;protein_id=WP_000157620.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 111798 112151 . - . ID=gene-VMS06_RS13770;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=VMS06_RS13770 NZ_JAVXZI010000011.1 Protein Homology CDS 111798 112151 . - 0 ID=cds-WP_001246155.1;Parent=gene-VMS06_RS13770;Dbxref=GenBank:WP_001246155.1;Name=WP_001246155.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654303.1;locus_tag=VMS06_RS13770;product=cation efflux system protein CusF;protein_id=WP_001246155.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 112179 113564 . - . ID=gene-VMS06_RS13775;Name=silC;gbkey=Gene;gene=silC;gene_biotype=protein_coding;locus_tag=VMS06_RS13775 NZ_JAVXZI010000011.1 Protein Homology CDS 112179 113564 . - 0 ID=cds-WP_000475506.1;Parent=gene-VMS06_RS13775;Dbxref=GenBank:WP_000475506.1;Name=WP_000475506.1;gbkey=CDS;gene=silC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572989.1;locus_tag=VMS06_RS13775;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC;protein_id=WP_000475506.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 113754 114434 . + . ID=gene-VMS06_RS13780;Name=silR;gbkey=Gene;gene=silR;gene_biotype=protein_coding;locus_tag=VMS06_RS13780 NZ_JAVXZI010000011.1 Protein Homology CDS 113754 114434 . + 0 ID=cds-WP_000697968.1;Parent=gene-VMS06_RS13780;Dbxref=GenBank:WP_000697968.1;Name=WP_000697968.1;gbkey=CDS;gene=silR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572351.1;locus_tag=VMS06_RS13780;product=copper/silver response regulator transcription factor SilR;protein_id=WP_000697968.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 114427 115908 . + . ID=gene-VMS06_RS13785;Name=silS;gbkey=Gene;gene=silS;gene_biotype=protein_coding;locus_tag=VMS06_RS13785 NZ_JAVXZI010000011.1 Protein Homology CDS 114427 115908 . + 0 ID=cds-WP_000555736.1;Parent=gene-VMS06_RS13785;Dbxref=GenBank:WP_000555736.1;Name=WP_000555736.1;gbkey=CDS;gene=silS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005763473.1;locus_tag=VMS06_RS13785;product=copper/silver sensor histidine kinase SilS;protein_id=WP_000555736.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 116153 116584 . + . ID=gene-VMS06_RS13790;Name=silE;gbkey=Gene;gene=silE;gene_biotype=protein_coding;locus_tag=VMS06_RS13790 NZ_JAVXZI010000011.1 Protein Homology CDS 116153 116584 . + 0 ID=cds-WP_000790485.1;Parent=gene-VMS06_RS13790;Dbxref=GenBank:WP_000790485.1;Name=WP_000790485.1;Ontology_term=GO:0046872;gbkey=CDS;gene=silE;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178091.1;locus_tag=VMS06_RS13790;product=silver-binding protein SilE;protein_id=WP_000790485.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 116732 117082 . + . ID=gene-VMS06_RS13795;Name=copM;gbkey=Gene;gene=copM;gene_biotype=protein_coding;locus_tag=VMS06_RS13795 NZ_JAVXZI010000011.1 Protein Homology CDS 116732 117082 . + 0 ID=cds-WP_000647570.1;Parent=gene-VMS06_RS13795;Dbxref=GenBank:WP_000647570.1;Name=WP_000647570.1;Ontology_term=GO:0055070,GO:0016530;gbkey=CDS;gene=copM;go_function=metallochaperone activity|0016530||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647571.1;locus_tag=VMS06_RS13795;product=CopM family metallochaperone;protein_id=WP_000647570.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 117251 119077 . - . ID=gene-VMS06_RS13800;Name=VMS06_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13800 NZ_JAVXZI010000011.1 Protein Homology CDS 117251 119077 . - 0 ID=cds-WP_001239419.1;Parent=gene-VMS06_RS13800;Dbxref=GenBank:WP_001239419.1;Name=WP_001239419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849142.1;locus_tag=VMS06_RS13800;product=AAA family ATPase;protein_id=WP_001239419.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 119641 119940 . - . ID=gene-VMS06_RS13805;Name=VMS06_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13805 NZ_JAVXZI010000011.1 Protein Homology CDS 119641 119940 . - 0 ID=cds-WP_001097216.1;Parent=gene-VMS06_RS13805;Dbxref=GenBank:WP_001097216.1;Name=WP_001097216.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001097216.1;locus_tag=VMS06_RS13805;product=helix-turn-helix domain-containing protein;protein_id=WP_001097216.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 120293 121219 . - . ID=gene-VMS06_RS13810;Name=VMS06_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13810 NZ_JAVXZI010000011.1 Protein Homology CDS 120293 121219 . - 0 ID=cds-WP_000262423.1;Parent=gene-VMS06_RS13810;Dbxref=GenBank:WP_000262423.1;Name=WP_000262423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000262420.1;locus_tag=VMS06_RS13810;product=hypothetical protein;protein_id=WP_000262423.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 121231 122787 . - . ID=gene-VMS06_RS13815;Name=VMS06_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13815 NZ_JAVXZI010000011.1 Protein Homology CDS 121231 122787 . - 0 ID=cds-WP_001324699.1;Parent=gene-VMS06_RS13815;Dbxref=GenBank:WP_001324699.1;Name=WP_001324699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001324699.1;locus_tag=VMS06_RS13815;product=TnsD family Tn7-like transposition protein;protein_id=WP_001324699.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 122828 124276 . - . ID=gene-VMS06_RS13820;Name=VMS06_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13820 NZ_JAVXZI010000011.1 Protein Homology CDS 122828 124276 . - 0 ID=cds-WP_001049180.1;Parent=gene-VMS06_RS13820;Dbxref=GenBank:WP_001049180.1;Name=WP_001049180.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001049180.1;locus_tag=VMS06_RS13820;product=ATP-binding protein;protein_id=WP_001049180.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 124276 126399 . - . ID=gene-VMS06_RS13825;Name=VMS06_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13825 NZ_JAVXZI010000011.1 Protein Homology CDS 124276 126399 . - 0 ID=cds-WP_000351437.1;Parent=gene-VMS06_RS13825;Dbxref=GenBank:WP_000351437.1;Name=WP_000351437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000351432.1;locus_tag=VMS06_RS13825;product=transposase;protein_id=WP_000351437.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 126386 127228 . - . ID=gene-VMS06_RS13830;Name=VMS06_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13830 NZ_JAVXZI010000011.1 Protein Homology CDS 126386 127228 . - 0 ID=cds-WP_000090707.1;Parent=gene-VMS06_RS13830;Dbxref=GenBank:WP_000090707.1;Name=WP_000090707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246651.1;locus_tag=VMS06_RS13830;product=TnsA endonuclease N-terminal domain-containing protein;protein_id=WP_000090707.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 127371 128573 . - . ID=gene-VMS06_RS13835;Name=VMS06_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13835 NZ_JAVXZI010000011.1 Protein Homology CDS 127371 128573 . - 0 ID=cds-WP_063148108.1;Parent=gene-VMS06_RS13835;Dbxref=GenBank:WP_063148108.1;Name=WP_063148108.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013099192.1;locus_tag=VMS06_RS13835;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_063148108.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 128802 130301 . + . ID=gene-VMS06_RS13840;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=VMS06_RS13840 NZ_JAVXZI010000011.1 Protein Homology CDS 128802 130301 . + 0 ID=cds-WP_022649706.1;Parent=gene-VMS06_RS13840;Dbxref=GenBank:WP_022649706.1;Name=WP_022649706.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462490.1;locus_tag=VMS06_RS13840;product=inorganic phosphate transporter PitA;protein_id=WP_022649706.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 130356 130691 . - . ID=gene-VMS06_RS13845;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=VMS06_RS13845 NZ_JAVXZI010000011.1 Protein Homology CDS 130356 130691 . - 0 ID=cds-WP_003861224.1;Parent=gene-VMS06_RS13845;Dbxref=GenBank:WP_003861224.1;Name=WP_003861224.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=VMS06_RS13845;product=universal stress protein UspB;protein_id=WP_003861224.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 130975 131412 . + . ID=gene-VMS06_RS13850;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=VMS06_RS13850 NZ_JAVXZI010000011.1 Protein Homology CDS 130975 131412 . + 0 ID=cds-WP_003861223.1;Parent=gene-VMS06_RS13850;Dbxref=GenBank:WP_003861223.1;Name=WP_003861223.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229315.1;locus_tag=VMS06_RS13850;product=universal stress protein UspA;protein_id=WP_003861223.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 131505 132257 . - . ID=gene-VMS06_RS13855;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=VMS06_RS13855 NZ_JAVXZI010000011.1 Protein Homology CDS 131505 132257 . - 0 ID=cds-WP_063148107.1;Parent=gene-VMS06_RS13855;Dbxref=GenBank:WP_063148107.1;Name=WP_063148107.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000686600.1;locus_tag=VMS06_RS13855;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_063148107.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 132265 134307 . - . ID=gene-VMS06_RS13860;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=VMS06_RS13860 NZ_JAVXZI010000011.1 Protein Homology CDS 132265 134307 . - 0 ID=cds-WP_063148106.1;Parent=gene-VMS06_RS13860;Dbxref=GenBank:WP_063148106.1;Name=WP_063148106.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417955.1;locus_tag=VMS06_RS13860;product=oligopeptidase A;protein_id=WP_063148106.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 134516 135358 . + . ID=gene-VMS06_RS13865;Name=VMS06_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13865 NZ_JAVXZI010000011.1 Protein Homology CDS 134516 135358 . + 0 ID=cds-WP_022649709.1;Parent=gene-VMS06_RS13865;Dbxref=GenBank:WP_022649709.1;Name=WP_022649709.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229320.1;locus_tag=VMS06_RS13865;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_022649709.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 135430 136782 . + . ID=gene-VMS06_RS13870;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=VMS06_RS13870 NZ_JAVXZI010000011.1 Protein Homology CDS 135430 136782 . + 0 ID=cds-WP_022649710.1;Parent=gene-VMS06_RS13870;Dbxref=GenBank:WP_022649710.1;Name=WP_022649710.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=VMS06_RS13870;product=glutathione-disulfide reductase;protein_id=WP_022649710.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 136965 138614 . + . ID=gene-VMS06_RS13875;Name=VMS06_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13875 NZ_JAVXZI010000011.1 Protein Homology CDS 136965 138614 . + 0 ID=cds-WP_032626866.1;Parent=gene-VMS06_RS13875;Dbxref=GenBank:WP_032626866.1;Name=WP_032626866.1;Ontology_term=GO:0005993,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose catabolic process|0005993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462504.1;locus_tag=VMS06_RS13875;product=alpha%2Calpha-trehalase;protein_id=WP_032626866.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 138725 140311 . - . ID=gene-VMS06_RS13880;Name=VMS06_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13880 NZ_JAVXZI010000011.1 Protein Homology CDS 138725 140311 . - 0 ID=cds-WP_063148104.1;Parent=gene-VMS06_RS13880;Dbxref=GenBank:WP_063148104.1;Name=WP_063148104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808566.1;locus_tag=VMS06_RS13880;product=STY4199 family HEPN domain-containing protein;protein_id=WP_063148104.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 140458 140997 . + . ID=gene-VMS06_RS13885;Name=VMS06_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13885 NZ_JAVXZI010000011.1 Protein Homology CDS 140458 140997 . + 0 ID=cds-WP_063148103.1;Parent=gene-VMS06_RS13885;Dbxref=GenBank:WP_063148103.1;Name=WP_063148103.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384181.1;locus_tag=VMS06_RS13885;product=GNAT family N-acetyltransferase;protein_id=WP_063148103.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 141069 141407 . + . ID=gene-VMS06_RS13890;Name=VMS06_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13890 NZ_JAVXZI010000011.1 Protein Homology CDS 141069 141407 . + 0 ID=cds-WP_063148102.1;Parent=gene-VMS06_RS13890;Dbxref=GenBank:WP_063148102.1;Name=WP_063148102.1;Ontology_term=GO:0009253,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571514.1;locus_tag=VMS06_RS13890;product=lysozyme;protein_id=WP_063148102.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 141386 141988 . - . ID=gene-VMS06_RS13895;Name=VMS06_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13895 NZ_JAVXZI010000011.1 Protein Homology CDS 141386 141988 . - 0 ID=cds-WP_022649715.1;Parent=gene-VMS06_RS13895;Dbxref=GenBank:WP_022649715.1;Name=WP_022649715.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384182.1;locus_tag=VMS06_RS13895;product=response regulator transcription factor;protein_id=WP_022649715.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 142163 142921 . - . ID=gene-VMS06_RS13900;Name=VMS06_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13900 NZ_JAVXZI010000011.1 Protein Homology CDS 142163 142921 . - 0 ID=cds-WP_023298834.1;Parent=gene-VMS06_RS13900;Dbxref=GenBank:WP_023298834.1;Name=WP_023298834.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004134253.1;locus_tag=VMS06_RS13900;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_023298834.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 143041 143940 . + . ID=gene-VMS06_RS13905;Name=VMS06_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13905 NZ_JAVXZI010000011.1 Protein Homology CDS 143041 143940 . + 0 ID=cds-WP_032621978.1;Parent=gene-VMS06_RS13905;Dbxref=GenBank:WP_032621978.1;Name=WP_032621978.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178014.1;locus_tag=VMS06_RS13905;product=LysR family transcriptional regulator;protein_id=WP_032621978.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 143991 145016 . + . ID=gene-VMS06_RS13910;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=VMS06_RS13910 NZ_JAVXZI010000011.1 Protein Homology CDS 143991 145016 . + 0 ID=cds-WP_022649719.1;Parent=gene-VMS06_RS13910;Dbxref=GenBank:WP_022649719.1;Name=WP_022649719.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001517299.1;locus_tag=VMS06_RS13910;product=inner membrane protein YhjD;protein_id=WP_022649719.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 145277 146599 . + . ID=gene-VMS06_RS13915;Name=VMS06_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13915 NZ_JAVXZI010000011.1 Protein Homology CDS 145277 146599 . + 0 ID=cds-WP_022649720.1;Parent=gene-VMS06_RS13915;Dbxref=GenBank:WP_022649720.1;Name=WP_022649720.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462510.1;locus_tag=VMS06_RS13915;product=MFS transporter;protein_id=WP_022649720.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 146693 148735 . - . ID=gene-VMS06_RS13920;Name=VMS06_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13920 NZ_JAVXZI010000011.1 Protein Homology CDS 146693 148735 . - 0 ID=cds-WP_023298835.1;Parent=gene-VMS06_RS13920;Dbxref=GenBank:WP_023298835.1;Name=WP_023298835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426027.1;locus_tag=VMS06_RS13920;product=AsmA family protein;protein_id=WP_023298835.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 148801 149574 . - . ID=gene-VMS06_RS13925;Name=pdeH;gbkey=Gene;gene=pdeH;gene_biotype=protein_coding;locus_tag=VMS06_RS13925 NZ_JAVXZI010000011.1 Protein Homology CDS 148801 149574 . - 0 ID=cds-WP_015571521.1;Parent=gene-VMS06_RS13925;Dbxref=GenBank:WP_015571521.1;Name=WP_015571521.1;gbkey=CDS;gene=pdeH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384185.1;locus_tag=VMS06_RS13925;product=cyclic-guanylate-specific phosphodiesterase;protein_id=WP_015571521.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 149805 150734 . + . ID=gene-VMS06_RS13930;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=VMS06_RS13930 NZ_JAVXZI010000011.1 Protein Homology CDS 149805 150734 . + 0 ID=cds-WP_063148101.1;Parent=gene-VMS06_RS13930;Dbxref=GenBank:WP_063148101.1;Name=WP_063148101.1;Ontology_term=GO:0000166,GO:0005524,GO:0008673;gbkey=CDS;gene=kdgK;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,2-dehydro-3-deoxygluconokinase activity|0008673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312433.2;locus_tag=VMS06_RS13930;product=2-dehydro-3-deoxygluconokinase;protein_id=WP_063148101.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 151127 152617 . - . ID=gene-VMS06_RS13935;Name=VMS06_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS13935 NZ_JAVXZI010000011.1 Protein Homology CDS 151127 152617 . - 0 ID=cds-WP_022649723.1;Parent=gene-VMS06_RS13935;Dbxref=GenBank:WP_022649723.1;Name=WP_022649723.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312434.1;locus_tag=VMS06_RS13935;product=M16 family metallopeptidase;protein_id=WP_022649723.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 152839 154125 . - . ID=gene-VMS06_RS13940;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=VMS06_RS13940 NZ_JAVXZI010000011.1 Protein Homology CDS 152839 154125 . - 0 ID=cds-WP_022649724.1;Parent=gene-VMS06_RS13940;Dbxref=GenBank:WP_022649724.1;Name=WP_022649724.1;gbkey=CDS;gene=dctA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462515.1;locus_tag=VMS06_RS13940;product=C4-dicarboxylate transporter DctC;protein_id=WP_022649724.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 154285 156291 . - . ID=gene-VMS06_RS13945;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=VMS06_RS13945 NZ_JAVXZI010000011.1 Protein Homology CDS 154285 156291 . - 0 ID=cds-WP_023307153.1;Parent=gene-VMS06_RS13945;Dbxref=GenBank:WP_023307153.1;Name=WP_023307153.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384187.1;locus_tag=VMS06_RS13945;product=biofilm formation regulator HmsP;protein_id=WP_023307153.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 156412 159894 . - . ID=gene-VMS06_RS13950;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=VMS06_RS13950 NZ_JAVXZI010000011.1 Protein Homology CDS 156412 159894 . - 0 ID=cds-WP_063148100.1;Parent=gene-VMS06_RS13950;Dbxref=GenBank:WP_063148100.1;Name=WP_063148100.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026226.4;locus_tag=VMS06_RS13950;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_063148100.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 159876 160982 . - . ID=gene-VMS06_RS13955;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=VMS06_RS13955 NZ_JAVXZI010000011.1 Protein Homology CDS 159876 160982 . - 0 ID=cds-WP_063148099.1;Parent=gene-VMS06_RS13955;Dbxref=GenBank:WP_063148099.1;Name=WP_063148099.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693808.1;locus_tag=VMS06_RS13955;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_063148099.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 160989 163412 . - . ID=gene-VMS06_RS13960;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=VMS06_RS13960 NZ_JAVXZI010000011.1 Protein Homology CDS 160989 163412 . - 0 ID=cds-WP_074172185.1;Parent=gene-VMS06_RS13960;Dbxref=GenBank:WP_074172185.1;Name=WP_074172185.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417989.1;locus_tag=VMS06_RS13960;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_074172185.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq pseudogene 163423 166027 . - . ID=gene-VMS06_RS13965;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=pseudogene;locus_tag=VMS06_RS13965;pseudo=true NZ_JAVXZI010000011.1 Protein Homology CDS 163423 166027 . - 0 ID=cds-VMS06_RS13965;Parent=gene-VMS06_RS13965;Note=frameshifted;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417990.4;locus_tag=VMS06_RS13965;product=UDP-forming cellulose synthase catalytic subunit;pseudo=true;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 166024 166776 . - . ID=gene-VMS06_RS13970;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=VMS06_RS13970 NZ_JAVXZI010000011.1 Protein Homology CDS 166024 166776 . - 0 ID=cds-WP_023298843.1;Parent=gene-VMS06_RS13970;Dbxref=GenBank:WP_023298843.1;Name=WP_023298843.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808584.1;locus_tag=VMS06_RS13970;product=cellulose biosynthesis protein BcsQ;protein_id=WP_023298843.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 166788 166976 . - . ID=gene-VMS06_RS13975;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=VMS06_RS13975 NZ_JAVXZI010000011.1 Protein Homology CDS 166788 166976 . - 0 ID=cds-WP_022649731.1;Parent=gene-VMS06_RS13975;Dbxref=GenBank:WP_022649731.1;Name=WP_022649731.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861175.1;locus_tag=VMS06_RS13975;product=cellulose biosynthesis protein BcsR;protein_id=WP_022649731.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 167151 168713 . + . ID=gene-VMS06_RS13980;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=VMS06_RS13980 NZ_JAVXZI010000011.1 Protein Homology CDS 167151 168713 . + 0 ID=cds-WP_022649732.1;Parent=gene-VMS06_RS13980;Dbxref=GenBank:WP_022649732.1;Name=WP_022649732.1;Ontology_term=GO:0035438;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384192.1;locus_tag=VMS06_RS13980;product=cellulose biosynthesis c-di-GMP-binding protein BcsE;protein_id=WP_022649732.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 168710 168904 . + . ID=gene-VMS06_RS13985;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=VMS06_RS13985 NZ_JAVXZI010000011.1 Protein Homology CDS 168710 168904 . + 0 ID=cds-WP_022649733.1;Parent=gene-VMS06_RS13985;Dbxref=GenBank:WP_022649733.1;Name=WP_022649733.1;Ontology_term=GO:0052324;gbkey=CDS;gene=bcsF;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384193.1;locus_tag=VMS06_RS13985;product=cellulose biosynthesis protein BcsF;protein_id=WP_022649733.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 168897 170576 . + . ID=gene-VMS06_RS13990;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=VMS06_RS13990 NZ_JAVXZI010000011.1 Protein Homology CDS 168897 170576 . + 0 ID=cds-WP_023298844.1;Parent=gene-VMS06_RS13990;Dbxref=GenBank:WP_023298844.1;Name=WP_023298844.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462525.1;locus_tag=VMS06_RS13990;product=cellulose biosynthesis protein BcsG;protein_id=WP_023298844.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 170610 171572 . - . ID=gene-VMS06_RS13995;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=VMS06_RS13995 NZ_JAVXZI010000011.1 Protein Homology CDS 170610 171572 . - 0 ID=cds-WP_063148097.1;Parent=gene-VMS06_RS13995;Dbxref=GenBank:WP_063148097.1;Name=WP_063148097.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386161.1;locus_tag=VMS06_RS13995;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_063148097.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 171569 172597 . - . ID=gene-VMS06_RS14000;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=VMS06_RS14000 NZ_JAVXZI010000011.1 Protein Homology CDS 171569 172597 . - 0 ID=cds-WP_023307159.1;Parent=gene-VMS06_RS14000;Dbxref=GenBank:WP_023307159.1;Name=WP_023307159.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312926.1;locus_tag=VMS06_RS14000;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_023307159.1;transl_table=11 NZ_JAVXZI010000011.1 RefSeq gene 172732 172840 . - . ID=gene-VMS06_RS14005;Name=rrf;end_range=172840,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VMS06_RS14005;partial=true NZ_JAVXZI010000011.1 cmsearch rRNA 172732 172840 . - . ID=rna-VMS06_RS14005;Parent=gene-VMS06_RS14005;Dbxref=RFAM:RF00001;end_range=172840,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS14005;partial=true;product=5S ribosomal RNA NZ_JAVXZI010000011.1 cmsearch exon 172732 172840 . - . ID=exon-VMS06_RS14005-1;Parent=rna-VMS06_RS14005;Dbxref=RFAM:RF00001;end_range=172840,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS14005;partial=true;product=5S ribosomal RNA ##sequence-region NZ_JAVXZI010000012.1 1 163352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000012.1 RefSeq region 1 163352 . + . ID=NZ_JAVXZI010000012.1:1..163352;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000012.1 RefSeq gene 144 1052 . - . ID=gene-VMS06_RS14010;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=VMS06_RS14010 NZ_JAVXZI010000012.1 Protein Homology CDS 144 1052 . - 0 ID=cds-WP_023299636.1;Parent=gene-VMS06_RS14010;Dbxref=GenBank:WP_023299636.1;Name=WP_023299636.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459779.1;locus_tag=VMS06_RS14010;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_023299636.1;transl_table=11 NZ_JAVXZI010000012.1 cmsearch riboswitch 1279 1412 . + . ID=id-NZ_JAVXZI010000012.1:1279..1412;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVXZI010000012.1 RefSeq gene 1400 2389 . + . ID=gene-VMS06_RS14015;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=VMS06_RS14015 NZ_JAVXZI010000012.1 Protein Homology CDS 1400 2389 . + 0 ID=cds-WP_017384935.1;Parent=gene-VMS06_RS14015;Dbxref=GenBank:WP_017384935.1;Name=WP_017384935.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225937.1;locus_tag=VMS06_RS14015;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_017384935.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 2414 2926 . + . ID=gene-VMS06_RS14020;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=VMS06_RS14020 NZ_JAVXZI010000012.1 Protein Homology CDS 2414 2926 . + 0 ID=cds-WP_022647501.1;Parent=gene-VMS06_RS14020;Dbxref=GenBank:WP_022647501.1;Name=WP_022647501.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=VMS06_RS14020;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_022647501.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 2930 3415 . + . ID=gene-VMS06_RS14025;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=VMS06_RS14025 NZ_JAVXZI010000012.1 Protein Homology CDS 2930 3415 . + 0 ID=cds-WP_006809528.1;Parent=gene-VMS06_RS14025;Dbxref=GenBank:WP_006809528.1;Name=WP_006809528.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308888.1;locus_tag=VMS06_RS14025;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_006809528.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 3408 3653 . + . ID=gene-VMS06_RS14030;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=VMS06_RS14030 NZ_JAVXZI010000012.1 Protein Homology CDS 3408 3653 . + 0 ID=cds-WP_046618591.1;Parent=gene-VMS06_RS14030;Dbxref=GenBank:WP_046618591.1;Name=WP_046618591.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308889.1;locus_tag=VMS06_RS14030;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_046618591.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 3655 4107 . + . ID=gene-VMS06_RS14035;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=VMS06_RS14035 NZ_JAVXZI010000012.1 Protein Homology CDS 3655 4107 . + 0 ID=cds-WP_022647503.1;Parent=gene-VMS06_RS14035;Dbxref=GenBank:WP_022647503.1;Name=WP_022647503.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225941.1;locus_tag=VMS06_RS14035;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_022647503.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 4166 4873 . + . ID=gene-VMS06_RS14040;Name=VMS06_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14040 NZ_JAVXZI010000012.1 Protein Homology CDS 4166 4873 . + 0 ID=cds-WP_015571081.1;Parent=gene-VMS06_RS14040;Dbxref=GenBank:WP_015571081.1;Name=WP_015571081.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459785.1;locus_tag=VMS06_RS14040;product=Bax inhibitor-1/YccA family protein;protein_id=WP_015571081.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 5406 6368 . - . ID=gene-VMS06_RS14045;Name=VMS06_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14045 NZ_JAVXZI010000012.1 Protein Homology CDS 5406 6368 . - 0 ID=cds-WP_023299637.1;Parent=gene-VMS06_RS14045;Dbxref=GenBank:WP_023299637.1;Name=WP_023299637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459789.1;locus_tag=VMS06_RS14045;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_023299637.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 6368 7606 . - . ID=gene-VMS06_RS14050;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=VMS06_RS14050 NZ_JAVXZI010000012.1 Protein Homology CDS 6368 7606 . - 0 ID=cds-WP_022647504.1;Parent=gene-VMS06_RS14050;Dbxref=GenBank:WP_022647504.1;Name=WP_022647504.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858503.1;locus_tag=VMS06_RS14050;product=cardiolipin synthase ClsB;protein_id=WP_022647504.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 7603 8364 . - . ID=gene-VMS06_RS14055;Name=VMS06_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14055 NZ_JAVXZI010000012.1 Protein Homology CDS 7603 8364 . - 0 ID=cds-WP_022647505.1;Parent=gene-VMS06_RS14055;Dbxref=GenBank:WP_022647505.1;Name=WP_022647505.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308895.1;locus_tag=VMS06_RS14055;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_022647505.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 8498 8908 . + . ID=gene-VMS06_RS14060;Name=VMS06_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14060 NZ_JAVXZI010000012.1 Protein Homology CDS 8498 8908 . + 0 ID=cds-WP_003858499.1;Parent=gene-VMS06_RS14060;Dbxref=GenBank:WP_003858499.1;Name=WP_003858499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809522.1;locus_tag=VMS06_RS14060;product=YbhQ family protein;protein_id=WP_003858499.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 8870 9976 . - . ID=gene-VMS06_RS14065;Name=VMS06_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14065 NZ_JAVXZI010000012.1 Protein Homology CDS 8870 9976 . - 0 ID=cds-WP_038415714.1;Parent=gene-VMS06_RS14065;Dbxref=GenBank:WP_038415714.1;Name=WP_038415714.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858497.1;locus_tag=VMS06_RS14065;product=ABC transporter permease;protein_id=WP_038415714.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 10034 11167 . - . ID=gene-VMS06_RS14070;Name=VMS06_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14070 NZ_JAVXZI010000012.1 Protein Homology CDS 10034 11167 . - 0 ID=cds-WP_022647507.1;Parent=gene-VMS06_RS14070;Dbxref=GenBank:WP_022647507.1;Name=WP_022647507.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831157.1;locus_tag=VMS06_RS14070;product=ABC transporter permease;protein_id=WP_022647507.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 11157 12896 . - . ID=gene-VMS06_RS14075;Name=VMS06_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14075 NZ_JAVXZI010000012.1 Protein Homology CDS 11157 12896 . - 0 ID=cds-WP_063148399.1;Parent=gene-VMS06_RS14075;Dbxref=GenBank:WP_063148399.1;Name=WP_063148399.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883091.1;locus_tag=VMS06_RS14075;product=ATP-binding cassette domain-containing protein;protein_id=WP_063148399.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 12889 13884 . - . ID=gene-VMS06_RS14080;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=VMS06_RS14080 NZ_JAVXZI010000012.1 Protein Homology CDS 12889 13884 . - 0 ID=cds-WP_063148400.1;Parent=gene-VMS06_RS14080;Dbxref=GenBank:WP_063148400.1;Name=WP_063148400.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459796.1;locus_tag=VMS06_RS14080;product=secretion protein HlyD;protein_id=WP_063148400.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 13881 14558 . - . ID=gene-VMS06_RS14085;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=VMS06_RS14085 NZ_JAVXZI010000012.1 Protein Homology CDS 13881 14558 . - 0 ID=cds-WP_046618586.1;Parent=gene-VMS06_RS14085;Dbxref=GenBank:WP_046618586.1;Name=WP_046618586.1;Ontology_term=GO:2000142,GO:0003700;gbkey=CDS;gene=cecR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169235.1;locus_tag=VMS06_RS14085;product=transcriptional regulator CecR;protein_id=WP_046618586.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 14763 16145 . + . ID=gene-VMS06_RS14090;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=VMS06_RS14090 NZ_JAVXZI010000012.1 Protein Homology CDS 14763 16145 . + 0 ID=cds-WP_017693771.1;Parent=gene-VMS06_RS14090;Dbxref=GenBank:WP_017693771.1;Name=WP_017693771.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308902.1;locus_tag=VMS06_RS14090;product=ATP-dependent RNA helicase RhlE;protein_id=WP_017693771.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 16243 18420 . + . ID=gene-VMS06_RS14095;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=VMS06_RS14095 NZ_JAVXZI010000012.1 Protein Homology CDS 16243 18420 . + 0 ID=cds-WP_038415719.1;Parent=gene-VMS06_RS14095;Dbxref=GenBank:WP_038415719.1;Name=WP_038415719.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177279.1;locus_tag=VMS06_RS14095;product=ATP-dependent DNA helicase DinG;protein_id=WP_038415719.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 18407 18910 . - . ID=gene-VMS06_RS14100;Name=VMS06_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14100 NZ_JAVXZI010000012.1 Protein Homology CDS 18407 18910 . - 0 ID=cds-WP_023299643.1;Parent=gene-VMS06_RS14100;Dbxref=GenBank:WP_023299643.1;Name=WP_023299643.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501157.1;locus_tag=VMS06_RS14100;product=fimbrial protein;protein_id=WP_023299643.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 18916 19905 . - . ID=gene-VMS06_RS14105;Name=VMS06_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14105 NZ_JAVXZI010000012.1 Protein Homology CDS 18916 19905 . - 0 ID=cds-WP_022647513.1;Parent=gene-VMS06_RS14105;Dbxref=GenBank:WP_022647513.1;Name=WP_022647513.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858481.1;locus_tag=VMS06_RS14105;product=fimbrial protein;protein_id=WP_022647513.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 19928 22471 . - . ID=gene-VMS06_RS14110;Name=VMS06_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14110 NZ_JAVXZI010000012.1 Protein Homology CDS 19928 22471 . - 0 ID=cds-WP_323630674.1;Parent=gene-VMS06_RS14110;Dbxref=GenBank:WP_323630674.1;Name=WP_323630674.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169242.1;locus_tag=VMS06_RS14110;product=fimbria/pilus outer membrane usher protein;protein_id=WP_323630674.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 22494 23168 . - . ID=gene-VMS06_RS14115;Name=VMS06_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14115 NZ_JAVXZI010000012.1 Protein Homology CDS 22494 23168 . - 0 ID=cds-WP_022647515.1;Parent=gene-VMS06_RS14115;Dbxref=GenBank:WP_022647515.1;Name=WP_022647515.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693767.1;locus_tag=VMS06_RS14115;product=fimbrial biogenesis chaperone;protein_id=WP_022647515.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 23238 23774 . - . ID=gene-VMS06_RS14120;Name=VMS06_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14120 NZ_JAVXZI010000012.1 Protein Homology CDS 23238 23774 . - 0 ID=cds-WP_022647516.1;Parent=gene-VMS06_RS14120;Dbxref=GenBank:WP_022647516.1;Name=WP_022647516.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571068.1;locus_tag=VMS06_RS14120;product=fimbrial protein;protein_id=WP_022647516.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 24031 24993 . + . ID=gene-VMS06_RS14125;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=VMS06_RS14125 NZ_JAVXZI010000012.1 Protein Homology CDS 24031 24993 . + 0 ID=cds-WP_063148401.1;Parent=gene-VMS06_RS14125;Dbxref=GenBank:WP_063148401.1;Name=WP_063148401.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809509.1;locus_tag=VMS06_RS14125;product=DNA-binding protein YbiB;protein_id=WP_063148401.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 25110 25370 . - . ID=gene-VMS06_RS14130;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=VMS06_RS14130 NZ_JAVXZI010000012.1 Protein Homology CDS 25110 25370 . - 0 ID=cds-WP_003858474.1;Parent=gene-VMS06_RS14130;Dbxref=GenBank:WP_003858474.1;Name=WP_003858474.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459801.1;locus_tag=VMS06_RS14130;product=DUF1471 family protein YbiJ;protein_id=WP_003858474.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 25656 25922 . - . ID=gene-VMS06_RS14135;Name=VMS06_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14135 NZ_JAVXZI010000012.1 Protein Homology CDS 25656 25922 . - 0 ID=cds-WP_022647518.1;Parent=gene-VMS06_RS14135;Dbxref=GenBank:WP_022647518.1;Name=WP_022647518.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459802.1;locus_tag=VMS06_RS14135;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_022647518.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 26041 26304 . - . ID=gene-VMS06_RS14140;Name=mcbA;gbkey=Gene;gene=mcbA;gene_biotype=protein_coding;locus_tag=VMS06_RS14140 NZ_JAVXZI010000012.1 Protein Homology CDS 26041 26304 . - 0 ID=cds-WP_063148402.1;Parent=gene-VMS06_RS14140;Dbxref=GenBank:WP_063148402.1;Name=WP_063148402.1;gbkey=CDS;gene=mcbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501166.1;locus_tag=VMS06_RS14140;product=DUF1471 family periplasmic protein McbA;protein_id=WP_063148402.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 26547 27458 . + . ID=gene-VMS06_RS14145;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=VMS06_RS14145 NZ_JAVXZI010000012.1 Protein Homology CDS 26547 27458 . + 0 ID=cds-WP_063148404.1;Parent=gene-VMS06_RS14145;Dbxref=GenBank:WP_063148404.1;Name=WP_063148404.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384919.1;locus_tag=VMS06_RS14145;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_063148404.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 27502 29712 . - . ID=gene-VMS06_RS14150;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=protein_coding;locus_tag=VMS06_RS14150 NZ_JAVXZI010000012.1 Protein Homology CDS 27502 29712 . - 0 ID=cds-WP_022647521.1;Parent=gene-VMS06_RS14150;Dbxref=GenBank:WP_022647521.1;Name=WP_022647521.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415329.4;locus_tag=VMS06_RS14150;product=mechanosensitive channel protein;protein_id=WP_022647521.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 29833 30555 . - . ID=gene-VMS06_RS14155;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=VMS06_RS14155 NZ_JAVXZI010000012.1 Protein Homology CDS 29833 30555 . - 0 ID=cds-WP_022647522.1;Parent=gene-VMS06_RS14155;Dbxref=GenBank:WP_022647522.1;Name=WP_022647522.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=VMS06_RS14155;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_022647522.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 30552 31211 . - . ID=gene-VMS06_RS14160;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=VMS06_RS14160 NZ_JAVXZI010000012.1 Protein Homology CDS 30552 31211 . - 0 ID=cds-WP_010428919.1;Parent=gene-VMS06_RS14160;Dbxref=GenBank:WP_010428919.1;Name=WP_010428919.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=VMS06_RS14160;product=glutamine ABC transporter permease GlnP;protein_id=WP_010428919.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 31305 32048 . - . ID=gene-VMS06_RS14165;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=VMS06_RS14165 NZ_JAVXZI010000012.1 Protein Homology CDS 31305 32048 . - 0 ID=cds-WP_058646135.1;Parent=gene-VMS06_RS14165;Dbxref=GenBank:WP_058646135.1;Name=WP_058646135.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=VMS06_RS14165;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_058646135.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 32410 32913 . - . ID=gene-VMS06_RS14170;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=VMS06_RS14170 NZ_JAVXZI010000012.1 Protein Homology CDS 32410 32913 . - 0 ID=cds-WP_000100801.1;Parent=gene-VMS06_RS14170;Dbxref=GenBank:WP_000100801.1;Name=WP_000100801.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001730644.1;locus_tag=VMS06_RS14170;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_000100801.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 33212 34099 . - . ID=gene-VMS06_RS14175;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=VMS06_RS14175 NZ_JAVXZI010000012.1 Protein Homology CDS 33212 34099 . - 0 ID=cds-WP_023305742.1;Parent=gene-VMS06_RS14175;Dbxref=GenBank:WP_023305742.1;Name=WP_023305742.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123676.1;locus_tag=VMS06_RS14175;product=threonine/homoserine exporter RhtA;protein_id=WP_023305742.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 34456 34974 . + . ID=gene-VMS06_RS14180;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=VMS06_RS14180 NZ_JAVXZI010000012.1 Protein Homology CDS 34456 34974 . + 0 ID=cds-WP_003858450.1;Parent=gene-VMS06_RS14180;Dbxref=GenBank:WP_003858450.1;Name=WP_003858450.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459810.1;locus_tag=VMS06_RS14180;product=outer membrane protein OmpX;protein_id=WP_003858450.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 35091 36674 . - . ID=gene-VMS06_RS14185;Name=VMS06_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14185 NZ_JAVXZI010000012.1 Protein Homology CDS 35091 36674 . - 0 ID=cds-WP_063148405.1;Parent=gene-VMS06_RS14185;Dbxref=GenBank:WP_063148405.1;Name=WP_063148405.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123670.1;locus_tag=VMS06_RS14185;product=phosphoethanolamine transferase;protein_id=WP_063148405.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 36943 37071 . - . ID=gene-VMS06_RS14190;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=VMS06_RS14190 NZ_JAVXZI010000012.1 Protein Homology CDS 36943 37071 . - 0 ID=cds-WP_022647525.1;Parent=gene-VMS06_RS14190;Dbxref=GenBank:WP_022647525.1;Name=WP_022647525.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831181.1;locus_tag=VMS06_RS14190;product=manganase accumulation protein MntS;protein_id=WP_022647525.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 37254 37727 . + . ID=gene-VMS06_RS14195;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=VMS06_RS14195 NZ_JAVXZI010000012.1 Protein Homology CDS 37254 37727 . + 0 ID=cds-WP_022647526.1;Parent=gene-VMS06_RS14195;Dbxref=GenBank:WP_022647526.1;Name=WP_022647526.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501176.1;locus_tag=VMS06_RS14195;product=manganese-binding transcriptional regulator MntR;protein_id=WP_022647526.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 37724 38833 . + . ID=gene-VMS06_RS14200;Name=VMS06_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14200 NZ_JAVXZI010000012.1 Protein Homology CDS 37724 38833 . + 0 ID=cds-WP_045308536.1;Parent=gene-VMS06_RS14200;Dbxref=GenBank:WP_045308536.1;Name=WP_045308536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428942.1;locus_tag=VMS06_RS14200;product=anion transporter;protein_id=WP_045308536.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 38935 40029 . + . ID=gene-VMS06_RS14205;Name=VMS06_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14205 NZ_JAVXZI010000012.1 Protein Homology CDS 38935 40029 . + 0 ID=cds-WP_022647528.1;Parent=gene-VMS06_RS14205;Dbxref=GenBank:WP_022647528.1;Name=WP_022647528.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069464.1;locus_tag=VMS06_RS14205;product=HlyD family secretion protein;protein_id=WP_022647528.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 40026 41597 . + . ID=gene-VMS06_RS14210;Name=VMS06_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14210 NZ_JAVXZI010000012.1 Protein Homology CDS 40026 41597 . + 0 ID=cds-WP_063148406.1;Parent=gene-VMS06_RS14210;Dbxref=GenBank:WP_063148406.1;Name=WP_063148406.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456032.1;locus_tag=VMS06_RS14210;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_063148406.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 41597 43120 . + . ID=gene-VMS06_RS14215;Name=VMS06_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14215 NZ_JAVXZI010000012.1 Protein Homology CDS 41597 43120 . + 0 ID=cds-WP_023299652.1;Parent=gene-VMS06_RS14215;Dbxref=GenBank:WP_023299652.1;Name=WP_023299652.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693763.1;locus_tag=VMS06_RS14215;product=efflux transporter outer membrane subunit;protein_id=WP_023299652.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 43223 44263 . + . ID=gene-VMS06_RS14220;Name=VMS06_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14220 NZ_JAVXZI010000012.1 Protein Homology CDS 43223 44263 . + 0 ID=cds-WP_063148407.1;Parent=gene-VMS06_RS14220;Dbxref=GenBank:WP_063148407.1;Name=WP_063148407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428955.1;locus_tag=VMS06_RS14220;product=aldo/keto reductase;protein_id=WP_063148407.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 44425 45801 . + . ID=gene-VMS06_RS14225;Name=VMS06_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14225 NZ_JAVXZI010000012.1 Protein Homology CDS 44425 45801 . + 0 ID=cds-WP_063148408.1;Parent=gene-VMS06_RS14225;Dbxref=GenBank:WP_063148408.1;Name=WP_063148408.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169267.1;locus_tag=VMS06_RS14225;product=glycoside hydrolase family 1 protein;protein_id=WP_063148408.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 45853 47175 . + . ID=gene-VMS06_RS14230;Name=VMS06_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14230 NZ_JAVXZI010000012.1 Protein Homology CDS 45853 47175 . + 0 ID=cds-WP_063146188.1;Parent=gene-VMS06_RS14230;Dbxref=GenBank:WP_063146188.1;Name=WP_063146188.1;Ontology_term=GO:0009401,GO:0016773,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428960.1;locus_tag=VMS06_RS14230;product=PTS sugar transporter subunit IIC;protein_id=WP_063146188.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 47190 47906 . + . ID=gene-VMS06_RS14235;Name=VMS06_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14235 NZ_JAVXZI010000012.1 Protein Homology CDS 47190 47906 . + 0 ID=cds-WP_015571043.1;Parent=gene-VMS06_RS14235;Dbxref=GenBank:WP_015571043.1;Name=WP_015571043.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225982.1;locus_tag=VMS06_RS14235;product=GntR family transcriptional regulator;protein_id=WP_015571043.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 47948 48868 . - . ID=gene-VMS06_RS14240;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=VMS06_RS14240 NZ_JAVXZI010000012.1 Protein Homology CDS 47948 48868 . - 0 ID=cds-WP_003858435.1;Parent=gene-VMS06_RS14240;Dbxref=GenBank:WP_003858435.1;Name=WP_003858435.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308923.1;locus_tag=VMS06_RS14240;product=L%2CD-transpeptidase;protein_id=WP_003858435.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 49091 50686 . + . ID=gene-VMS06_RS14245;Name=VMS06_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14245 NZ_JAVXZI010000012.1 Protein Homology CDS 49091 50686 . + 0 ID=cds-WP_023299657.1;Parent=gene-VMS06_RS14245;Dbxref=GenBank:WP_023299657.1;Name=WP_023299657.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013366976.1;locus_tag=VMS06_RS14245;product=ABC-F family ATPase;protein_id=WP_023299657.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 50779 53142 . - . ID=gene-VMS06_RS14250;Name=VMS06_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14250 NZ_JAVXZI010000012.1 Protein Homology CDS 50779 53142 . - 0 ID=cds-WP_063148409.1;Parent=gene-VMS06_RS14250;Dbxref=GenBank:WP_063148409.1;Name=WP_063148409.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884900.1;locus_tag=VMS06_RS14250;product=glycoside hydrolase family 31 protein;protein_id=WP_063148409.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 53160 54461 . - . ID=gene-VMS06_RS14255;Name=VMS06_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14255 NZ_JAVXZI010000012.1 Protein Homology CDS 53160 54461 . - 0 ID=cds-WP_023299659.1;Parent=gene-VMS06_RS14255;Dbxref=GenBank:WP_023299659.1;Name=WP_023299659.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225987.1;locus_tag=VMS06_RS14255;product=MFS transporter;protein_id=WP_023299659.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 54747 55820 . + . ID=gene-VMS06_RS14260;Name=VMS06_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14260 NZ_JAVXZI010000012.1 Protein Homology CDS 54747 55820 . + 0 ID=cds-WP_032676354.1;Parent=gene-VMS06_RS14260;Dbxref=GenBank:WP_032676354.1;Name=WP_032676354.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884898.1;locus_tag=VMS06_RS14260;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_032676354.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 55817 57073 . - . ID=gene-VMS06_RS14265;Name=VMS06_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14265 NZ_JAVXZI010000012.1 Protein Homology CDS 55817 57073 . - 0 ID=cds-WP_063148410.1;Parent=gene-VMS06_RS14265;Dbxref=GenBank:WP_063148410.1;Name=WP_063148410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693750.1;locus_tag=VMS06_RS14265;product=DUF1479 domain-containing protein;protein_id=WP_063148410.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 57224 58039 . - . ID=gene-VMS06_RS14270;Name=VMS06_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14270 NZ_JAVXZI010000012.1 Protein Homology CDS 57224 58039 . - 0 ID=cds-WP_063148411.1;Parent=gene-VMS06_RS14270;Dbxref=GenBank:WP_063148411.1;Name=WP_063148411.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097443.1;locus_tag=VMS06_RS14270;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_063148411.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 58206 60638 . - . ID=gene-VMS06_RS14275;Name=VMS06_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14275 NZ_JAVXZI010000012.1 Protein Homology CDS 58206 60638 . - 0 ID=cds-WP_063148412.1;Parent=gene-VMS06_RS14275;Dbxref=GenBank:WP_063148412.1;Name=WP_063148412.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706700.1;locus_tag=VMS06_RS14275;product=formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme;protein_id=WP_063148412.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 60643 61542 . - . ID=gene-VMS06_RS14280;Name=VMS06_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14280 NZ_JAVXZI010000012.1 Protein Homology CDS 60643 61542 . - 0 ID=cds-WP_045621935.1;Parent=gene-VMS06_RS14280;Dbxref=GenBank:WP_045621935.1;Name=WP_045621935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415345.2;locus_tag=VMS06_RS14280;product=glycyl-radical enzyme activating protein;protein_id=WP_045621935.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 61670 62332 . + . ID=gene-VMS06_RS14285;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=VMS06_RS14285 NZ_JAVXZI010000012.1 Protein Homology CDS 61670 62332 . + 0 ID=cds-WP_048966437.1;Parent=gene-VMS06_RS14285;Dbxref=GenBank:WP_048966437.1;Name=WP_048966437.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415346.4;locus_tag=VMS06_RS14285;product=fructose-6-phosphate aldolase;protein_id=WP_048966437.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 62431 63183 . - . ID=gene-VMS06_RS14290;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=VMS06_RS14290 NZ_JAVXZI010000012.1 Protein Homology CDS 62431 63183 . - 0 ID=cds-WP_045308528.1;Parent=gene-VMS06_RS14290;Dbxref=GenBank:WP_045308528.1;Name=WP_045308528.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006174243.1;locus_tag=VMS06_RS14290;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_045308528.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 63185 64417 . - . ID=gene-VMS06_RS14295;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=VMS06_RS14295 NZ_JAVXZI010000012.1 Protein Homology CDS 63185 64417 . - 0 ID=cds-WP_063148413.1;Parent=gene-VMS06_RS14295;Dbxref=GenBank:WP_063148413.1;Name=WP_063148413.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069483.1;locus_tag=VMS06_RS14295;product=molybdopterin molybdotransferase MoeA;protein_id=WP_063148413.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 64607 65545 . + . ID=gene-VMS06_RS14300;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=VMS06_RS14300 NZ_JAVXZI010000012.1 Protein Homology CDS 64607 65545 . + 0 ID=cds-WP_023299667.1;Parent=gene-VMS06_RS14300;Dbxref=GenBank:WP_023299667.1;Name=WP_023299667.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459824.1;locus_tag=VMS06_RS14300;product=beta-aspartyl-peptidase;protein_id=WP_023299667.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 65557 67428 . + . ID=gene-VMS06_RS14305;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=VMS06_RS14305 NZ_JAVXZI010000012.1 Protein Homology CDS 65557 67428 . + 0 ID=cds-WP_063843884.1;Parent=gene-VMS06_RS14305;Dbxref=GenBank:WP_063843884.1;Name=WP_063843884.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459825.1;locus_tag=VMS06_RS14305;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_063843884.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 67452 68990 . + . ID=gene-VMS06_RS14310;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=VMS06_RS14310 NZ_JAVXZI010000012.1 Protein Homology CDS 67452 68990 . + 0 ID=cds-WP_032624586.1;Parent=gene-VMS06_RS14310;Dbxref=GenBank:WP_032624586.1;Name=WP_032624586.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123644.1;locus_tag=VMS06_RS14310;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_032624586.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 68996 69916 . + . ID=gene-VMS06_RS14315;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=VMS06_RS14315 NZ_JAVXZI010000012.1 Protein Homology CDS 68996 69916 . + 0 ID=cds-WP_006809475.1;Parent=gene-VMS06_RS14315;Dbxref=GenBank:WP_006809475.1;Name=WP_006809475.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459827.1;locus_tag=VMS06_RS14315;product=glutathione ABC transporter permease GsiC;protein_id=WP_006809475.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 69918 70829 . + . ID=gene-VMS06_RS14320;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=VMS06_RS14320 NZ_JAVXZI010000012.1 Protein Homology CDS 69918 70829 . + 0 ID=cds-WP_023299670.1;Parent=gene-VMS06_RS14320;Dbxref=GenBank:WP_023299670.1;Name=WP_023299670.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225999.1;locus_tag=VMS06_RS14320;product=glutathione ABC transporter permease GsiD;protein_id=WP_023299670.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 70949 72274 . - . ID=gene-VMS06_RS14325;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=VMS06_RS14325 NZ_JAVXZI010000012.1 Protein Homology CDS 70949 72274 . - 0 ID=cds-WP_063148415.1;Parent=gene-VMS06_RS14325;Dbxref=GenBank:WP_063148415.1;Name=WP_063148415.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308942.1;locus_tag=VMS06_RS14325;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_063148415.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 72492 72875 . + . ID=gene-VMS06_RS14330;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=VMS06_RS14330 NZ_JAVXZI010000012.1 Protein Homology CDS 72492 72875 . + 0 ID=cds-WP_022647550.1;Parent=gene-VMS06_RS14330;Dbxref=GenBank:WP_022647550.1;Name=WP_022647550.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097430.1;locus_tag=VMS06_RS14330;product=biofilm formation regulator BssR;protein_id=WP_022647550.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 72982 74100 . + . ID=gene-VMS06_RS14335;Name=VMS06_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14335 NZ_JAVXZI010000012.1 Protein Homology CDS 72982 74100 . + 0 ID=cds-WP_063148416.1;Parent=gene-VMS06_RS14335;Dbxref=GenBank:WP_063148416.1;Name=WP_063148416.1;Ontology_term=GO:0016901,GO:0070968;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA,pyrroloquinoline quinone binding|0070968||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384889.1;locus_tag=VMS06_RS14335;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_063148416.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 74101 74727 . - . ID=gene-VMS06_RS14340;Name=VMS06_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14340 NZ_JAVXZI010000012.1 Protein Homology CDS 74101 74727 . - 0 ID=cds-WP_022647552.1;Parent=gene-VMS06_RS14340;Dbxref=GenBank:WP_022647552.1;Name=WP_022647552.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459839.1;locus_tag=VMS06_RS14340;product=glutathione S-transferase family protein;protein_id=WP_022647552.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 74971 76176 . + . ID=gene-VMS06_RS14345;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=VMS06_RS14345 NZ_JAVXZI010000012.1 Protein Homology CDS 74971 76176 . + 0 ID=cds-WP_023299674.1;Parent=gene-VMS06_RS14345;Dbxref=GenBank:WP_023299674.1;Name=WP_023299674.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308946.1;locus_tag=VMS06_RS14345;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_023299674.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 76262 77020 . - . ID=gene-VMS06_RS14350;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=VMS06_RS14350 NZ_JAVXZI010000012.1 Protein Homology CDS 76262 77020 . - 0 ID=cds-WP_022647554.1;Parent=gene-VMS06_RS14350;Dbxref=GenBank:WP_022647554.1;Name=WP_022647554.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459841.1;locus_tag=VMS06_RS14350;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_022647554.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 77088 77696 . - . ID=gene-VMS06_RS14355;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=VMS06_RS14355 NZ_JAVXZI010000012.1 Protein Homology CDS 77088 77696 . - 0 ID=cds-WP_045308522.1;Parent=gene-VMS06_RS14355;Dbxref=GenBank:WP_045308522.1;Name=WP_045308522.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883142.1;locus_tag=VMS06_RS14355;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_045308522.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 77704 78432 . - . ID=gene-VMS06_RS14360;Name=VMS06_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14360 NZ_JAVXZI010000012.1 Protein Homology CDS 77704 78432 . - 0 ID=cds-WP_063148417.1;Parent=gene-VMS06_RS14360;Dbxref=GenBank:WP_063148417.1;Name=WP_063148417.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693740.1;locus_tag=VMS06_RS14360;product=phosphatase PAP2 family protein;protein_id=WP_063148417.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 78600 79832 . + . ID=gene-VMS06_RS14365;Name=VMS06_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14365 NZ_JAVXZI010000012.1 Protein Homology CDS 78600 79832 . + 0 ID=cds-WP_022647557.1;Parent=gene-VMS06_RS14365;Dbxref=GenBank:WP_022647557.1;Name=WP_022647557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169295.1;locus_tag=VMS06_RS14365;product=MFS transporter;protein_id=WP_022647557.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 80357 81169 . - . ID=gene-VMS06_RS14370;Name=VMS06_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14370 NZ_JAVXZI010000012.1 Protein Homology CDS 80357 81169 . - 0 ID=cds-WP_022647558.1;Parent=gene-VMS06_RS14370;Dbxref=GenBank:WP_022647558.1;Name=WP_022647558.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809464.1;locus_tag=VMS06_RS14370;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_022647558.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 81159 82373 . - . ID=gene-VMS06_RS14375;Name=VMS06_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14375 NZ_JAVXZI010000012.1 Protein Homology CDS 81159 82373 . - 0 ID=cds-WP_023299676.1;Parent=gene-VMS06_RS14375;Dbxref=GenBank:WP_023299676.1;Name=WP_023299676.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069499.1;locus_tag=VMS06_RS14375;product=MFS transporter;protein_id=WP_023299676.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 82456 83007 . + . ID=gene-VMS06_RS14380;Name=VMS06_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14380 NZ_JAVXZI010000012.1 Protein Homology CDS 82456 83007 . + 0 ID=cds-WP_063148398.1;Parent=gene-VMS06_RS14380;Dbxref=GenBank:WP_063148398.1;Name=WP_063148398.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571021.1;locus_tag=VMS06_RS14380;product=TetR/AcrR family transcriptional regulator;protein_id=WP_063148398.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 83035 83460 . - . ID=gene-VMS06_RS14385;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=VMS06_RS14385 NZ_JAVXZI010000012.1 Protein Homology CDS 83035 83460 . - 0 ID=cds-WP_063148397.1;Parent=gene-VMS06_RS14385;Dbxref=GenBank:WP_063148397.1;Name=WP_063148397.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858401.1;locus_tag=VMS06_RS14385;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_063148397.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 83473 84762 . - . ID=gene-VMS06_RS14390;Name=VMS06_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14390 NZ_JAVXZI010000012.1 Protein Homology CDS 83473 84762 . - 0 ID=cds-WP_023299679.1;Parent=gene-VMS06_RS14390;Dbxref=GenBank:WP_023299679.1;Name=WP_023299679.1;Ontology_term=GO:0046685,GO:0015105,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312401.1;locus_tag=VMS06_RS14390;product=arsenic transporter;protein_id=WP_023299679.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 84803 85123 . - . ID=gene-VMS06_RS14395;Name=VMS06_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14395 NZ_JAVXZI010000012.1 Protein Homology CDS 84803 85123 . - 0 ID=cds-WP_015571018.1;Parent=gene-VMS06_RS14395;Dbxref=GenBank:WP_015571018.1;Name=WP_015571018.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693734.1;locus_tag=VMS06_RS14395;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_015571018.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq pseudogene 85530 85831 . - . ID=gene-VMS06_RS14400;Name=VMS06_RS14400;end_range=85831,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS14400;partial=true;pseudo=true NZ_JAVXZI010000012.1 Protein Homology CDS 85530 85831 . - 0 ID=cds-VMS06_RS14400;Parent=gene-VMS06_RS14400;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=85831,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996732.1;locus_tag=VMS06_RS14400;partial=true;product=tlde1 domain-containing protein;pseudo=true;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 86029 86673 . + . ID=gene-VMS06_RS14405;Name=VMS06_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14405 NZ_JAVXZI010000012.1 Protein Homology CDS 86029 86673 . + 0 ID=cds-WP_046618550.1;Parent=gene-VMS06_RS14405;Dbxref=GenBank:WP_046618550.1;Name=WP_046618550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862579.1;locus_tag=VMS06_RS14405;product=hypothetical protein;protein_id=WP_046618550.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 87096 88781 . - . ID=gene-VMS06_RS14410;Name=VMS06_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14410 NZ_JAVXZI010000012.1 Protein Homology CDS 87096 88781 . - 0 ID=cds-WP_001024855.1;Parent=gene-VMS06_RS14410;Dbxref=GenBank:WP_001024855.1;Name=WP_001024855.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001024888.1;locus_tag=VMS06_RS14410;product=aspartate:alanine antiporter;protein_id=WP_001024855.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 89056 89430 . + . ID=gene-VMS06_RS14415;Name=VMS06_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14415 NZ_JAVXZI010000012.1 Protein Homology CDS 89056 89430 . + 0 ID=cds-WP_023299682.1;Parent=gene-VMS06_RS14415;Dbxref=GenBank:WP_023299682.1;Name=WP_023299682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384878.1;locus_tag=VMS06_RS14415;product=inner membrane protein YbjM;protein_id=WP_023299682.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 89461 89730 . - . ID=gene-VMS06_RS14420;Name=VMS06_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14420 NZ_JAVXZI010000012.1 Protein Homology CDS 89461 89730 . - 0 ID=cds-WP_014169305.1;Parent=gene-VMS06_RS14420;Dbxref=GenBank:WP_014169305.1;Name=WP_014169305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169305.1;locus_tag=VMS06_RS14420;product=GrxA family glutaredoxin;protein_id=WP_014169305.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 89916 90638 . + . ID=gene-VMS06_RS14425;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=VMS06_RS14425 NZ_JAVXZI010000012.1 Protein Homology CDS 89916 90638 . + 0 ID=cds-WP_063199592.1;Parent=gene-VMS06_RS14425;Dbxref=GenBank:WP_063199592.1;Name=WP_063199592.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308958.1;locus_tag=VMS06_RS14425;product=nitroreductase NfsA;protein_id=WP_063199592.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 90703 91605 . + . ID=gene-VMS06_RS14430;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=VMS06_RS14430 NZ_JAVXZI010000012.1 Protein Homology CDS 90703 91605 . + 0 ID=cds-WP_032621711.1;Parent=gene-VMS06_RS14430;Dbxref=GenBank:WP_032621711.1;Name=WP_032621711.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308959.1;locus_tag=VMS06_RS14430;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_032621711.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 91669 92145 . + . ID=gene-VMS06_RS14435;Name=VMS06_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14435 NZ_JAVXZI010000012.1 Protein Homology CDS 91669 92145 . + 0 ID=cds-WP_022647571.1;Parent=gene-VMS06_RS14435;Dbxref=GenBank:WP_022647571.1;Name=WP_022647571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069507.1;locus_tag=VMS06_RS14435;product=YbjN domain-containing protein;protein_id=WP_022647571.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 92496 93608 . + . ID=gene-VMS06_RS14440;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=VMS06_RS14440 NZ_JAVXZI010000012.1 Protein Homology CDS 92496 93608 . + 0 ID=cds-WP_022647572.1;Parent=gene-VMS06_RS14440;Dbxref=GenBank:WP_022647572.1;Name=WP_022647572.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226062.1;locus_tag=VMS06_RS14440;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_022647572.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 93752 94885 . + . ID=gene-VMS06_RS14445;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=VMS06_RS14445 NZ_JAVXZI010000012.1 Protein Homology CDS 93752 94885 . + 0 ID=cds-WP_063148396.1;Parent=gene-VMS06_RS14445;Dbxref=GenBank:WP_063148396.1;Name=WP_063148396.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=VMS06_RS14445;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_063148396.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 94895 95848 . + . ID=gene-VMS06_RS14450;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=VMS06_RS14450 NZ_JAVXZI010000012.1 Protein Homology CDS 94895 95848 . + 0 ID=cds-WP_022647573.1;Parent=gene-VMS06_RS14450;Dbxref=GenBank:WP_022647573.1;Name=WP_022647573.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459856.1;locus_tag=VMS06_RS14450;product=putrescine ABC transporter permease PotH;protein_id=WP_022647573.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 95845 96690 . + . ID=gene-VMS06_RS14455;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=VMS06_RS14455 NZ_JAVXZI010000012.1 Protein Homology CDS 95845 96690 . + 0 ID=cds-WP_022647574.1;Parent=gene-VMS06_RS14455;Dbxref=GenBank:WP_022647574.1;Name=WP_022647574.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459857.1;locus_tag=VMS06_RS14455;product=putrescine ABC transporter permease PotI;protein_id=WP_022647574.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 96733 97230 . + . ID=gene-VMS06_RS14460;Name=VMS06_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14460 NZ_JAVXZI010000012.1 Protein Homology CDS 96733 97230 . + 0 ID=cds-WP_100148782.1;Parent=gene-VMS06_RS14460;Dbxref=GenBank:WP_100148782.1;Name=WP_100148782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001444325.1;locus_tag=VMS06_RS14460;product=YbjO family protein;protein_id=WP_100148782.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 97271 98398 . + . ID=gene-VMS06_RS14465;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=VMS06_RS14465 NZ_JAVXZI010000012.1 Protein Homology CDS 97271 98398 . + 0 ID=cds-WP_032676348.1;Parent=gene-VMS06_RS14465;Dbxref=GenBank:WP_032676348.1;Name=WP_032676348.1;Ontology_term=GO:0000154,GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016773.1;locus_tag=VMS06_RS14465;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_032676348.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 98471 99178 . + . ID=gene-VMS06_RS14470;Name=VMS06_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14470 NZ_JAVXZI010000012.1 Protein Homology CDS 98471 99178 . + 0 ID=cds-WP_323630675.1;Parent=gene-VMS06_RS14470;Dbxref=GenBank:WP_323630675.1;Name=WP_323630675.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006174311.1;locus_tag=VMS06_RS14470;product=response regulator transcription factor;protein_id=WP_323630675.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 99162 100631 . + . ID=gene-VMS06_RS14475;Name=VMS06_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14475 NZ_JAVXZI010000012.1 Protein Homology CDS 99162 100631 . + 0 ID=cds-WP_046618484.1;Parent=gene-VMS06_RS14475;Dbxref=GenBank:WP_046618484.1;Name=WP_046618484.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226069.1;locus_tag=VMS06_RS14475;product=sensor histidine kinase;protein_id=WP_046618484.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 100707 101438 . - . ID=gene-VMS06_RS14480;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=VMS06_RS14480 NZ_JAVXZI010000012.1 Protein Homology CDS 100707 101438 . - 0 ID=cds-WP_015571008.1;Parent=gene-VMS06_RS14480;Dbxref=GenBank:WP_015571008.1;Name=WP_015571008.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226070.1;locus_tag=VMS06_RS14480;product=arginine ABC transporter substrate-binding protein ArtJ;protein_id=WP_015571008.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 101612 102280 . - . ID=gene-VMS06_RS14485;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=VMS06_RS14485 NZ_JAVXZI010000012.1 Protein Homology CDS 101612 102280 . - 0 ID=cds-WP_022647579.1;Parent=gene-VMS06_RS14485;Dbxref=GenBank:WP_022647579.1;Name=WP_022647579.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308971.1;locus_tag=VMS06_RS14485;product=arginine ABC transporter permease ArtM;protein_id=WP_022647579.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 102280 102996 . - . ID=gene-VMS06_RS14490;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=VMS06_RS14490 NZ_JAVXZI010000012.1 Protein Homology CDS 102280 102996 . - 0 ID=cds-WP_063148394.1;Parent=gene-VMS06_RS14490;Dbxref=GenBank:WP_063148394.1;Name=WP_063148394.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226072.1;locus_tag=VMS06_RS14490;product=arginine ABC transporter permease ArtQ;protein_id=WP_063148394.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 103003 103734 . - . ID=gene-VMS06_RS14495;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=VMS06_RS14495 NZ_JAVXZI010000012.1 Protein Homology CDS 103003 103734 . - 0 ID=cds-WP_006174322.1;Parent=gene-VMS06_RS14495;Dbxref=GenBank:WP_006174322.1;Name=WP_006174322.1;Ontology_term=GO:0015424,GO:0043190;gbkey=CDS;gene=artI;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type amino acid transporter activity|0015424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459866.1;locus_tag=VMS06_RS14495;product=arginine ABC transporter substrate-binding protein ArtI;protein_id=WP_006174322.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 103753 104481 . - . ID=gene-VMS06_RS14500;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=VMS06_RS14500 NZ_JAVXZI010000012.1 Protein Homology CDS 103753 104481 . - 0 ID=cds-WP_006809439.1;Parent=gene-VMS06_RS14500;Dbxref=GenBank:WP_006809439.1;Name=WP_006809439.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=VMS06_RS14500;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_006809439.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 104708 105226 . - . ID=gene-VMS06_RS14505;Name=VMS06_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14505 NZ_JAVXZI010000012.1 Protein Homology CDS 104708 105226 . - 0 ID=cds-WP_022647580.1;Parent=gene-VMS06_RS14505;Dbxref=GenBank:WP_022647580.1;Name=WP_022647580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415386.1;locus_tag=VMS06_RS14505;product=lipoprotein;protein_id=WP_022647580.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 105324 105647 . + . ID=gene-VMS06_RS14510;Name=VMS06_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14510 NZ_JAVXZI010000012.1 Protein Homology CDS 105324 105647 . + 0 ID=cds-WP_003858361.1;Parent=gene-VMS06_RS14510;Dbxref=GenBank:WP_003858361.1;Name=WP_003858361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111837.1;locus_tag=VMS06_RS14510;product=heavy metal-binding domain-containing protein;protein_id=WP_003858361.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 105644 106474 . + . ID=gene-VMS06_RS14515;Name=VMS06_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14515 NZ_JAVXZI010000012.1 Protein Homology CDS 105644 106474 . + 0 ID=cds-WP_023305777.1;Parent=gene-VMS06_RS14515;Dbxref=GenBank:WP_023305777.1;Name=WP_023305777.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745,GO:0042834,GO:0046872;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693727.1;locus_tag=VMS06_RS14515;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_023305777.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 106737 107360 . + . ID=gene-VMS06_RS14520;Name=VMS06_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14520 NZ_JAVXZI010000012.1 Protein Homology CDS 106737 107360 . + 0 ID=cds-WP_022647582.1;Parent=gene-VMS06_RS14520;Dbxref=GenBank:WP_022647582.1;Name=WP_022647582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883167.1;locus_tag=VMS06_RS14520;product=helix-turn-helix domain-containing protein;protein_id=WP_022647582.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 107364 107996 . - . ID=gene-VMS06_RS14525;Name=VMS06_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14525 NZ_JAVXZI010000012.1 Protein Homology CDS 107364 107996 . - 0 ID=cds-WP_045623349.1;Parent=gene-VMS06_RS14525;Dbxref=GenBank:WP_045623349.1;Name=WP_045623349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384869.1;locus_tag=VMS06_RS14525;product=hypothetical protein;protein_id=WP_045623349.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 107996 109558 . - . ID=gene-VMS06_RS14530;Name=VMS06_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14530 NZ_JAVXZI010000012.1 Protein Homology CDS 107996 109558 . - 0 ID=cds-WP_063148393.1;Parent=gene-VMS06_RS14530;Dbxref=GenBank:WP_063148393.1;Name=WP_063148393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384868.1;locus_tag=VMS06_RS14530;product=ExeA family protein;protein_id=WP_063148393.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 109859 110590 . + . ID=gene-VMS06_RS14535;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=VMS06_RS14535 NZ_JAVXZI010000012.1 Protein Homology CDS 109859 110590 . + 0 ID=cds-WP_032621712.1;Parent=gene-VMS06_RS14535;Dbxref=GenBank:WP_032621712.1;Name=WP_032621712.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspC;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384867.1;locus_tag=VMS06_RS14535;product=type II secretion system protein GspC;protein_id=WP_032621712.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 110604 112526 . + . ID=gene-VMS06_RS14540;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=VMS06_RS14540 NZ_JAVXZI010000012.1 Protein Homology CDS 110604 112526 . + 0 ID=cds-WP_023299693.1;Parent=gene-VMS06_RS14540;Dbxref=GenBank:WP_023299693.1;Name=WP_023299693.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384866.1;locus_tag=VMS06_RS14540;product=type II secretion system secretin GspD;protein_id=WP_023299693.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 112541 114019 . + . ID=gene-VMS06_RS14545;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=VMS06_RS14545 NZ_JAVXZI010000012.1 Protein Homology CDS 112541 114019 . + 0 ID=cds-WP_063148392.1;Parent=gene-VMS06_RS14545;Dbxref=GenBank:WP_063148392.1;Name=WP_063148392.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500020.1;locus_tag=VMS06_RS14545;product=type II secretion system ATPase GspE;protein_id=WP_063148392.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 114019 115227 . + . ID=gene-VMS06_RS14550;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=VMS06_RS14550 NZ_JAVXZI010000012.1 Protein Homology CDS 114019 115227 . + 0 ID=cds-WP_063148391.1;Parent=gene-VMS06_RS14550;Dbxref=GenBank:WP_063148391.1;Name=WP_063148391.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097350.1;locus_tag=VMS06_RS14550;product=type II secretion system inner membrane protein GspF;protein_id=WP_063148391.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 115231 115680 . + . ID=gene-VMS06_RS14555;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=VMS06_RS14555 NZ_JAVXZI010000012.1 Protein Homology CDS 115231 115680 . + 0 ID=cds-WP_023299696.1;Parent=gene-VMS06_RS14555;Dbxref=GenBank:WP_023299696.1;Name=WP_023299696.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809430.1;locus_tag=VMS06_RS14555;product=type II secretion system major pseudopilin GspG;protein_id=WP_023299696.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 115680 116165 . + . ID=gene-VMS06_RS14560;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=VMS06_RS14560 NZ_JAVXZI010000012.1 Protein Homology CDS 115680 116165 . + 0 ID=cds-WP_023299697.1;Parent=gene-VMS06_RS14560;Dbxref=GenBank:WP_023299697.1;Name=WP_023299697.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858349.1;locus_tag=VMS06_RS14560;product=type II secretion system minor pseudopilin GspH;protein_id=WP_023299697.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 116158 116538 . + . ID=gene-VMS06_RS14565;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=VMS06_RS14565 NZ_JAVXZI010000012.1 Protein Homology CDS 116158 116538 . + 0 ID=cds-WP_045308510.1;Parent=gene-VMS06_RS14565;Dbxref=GenBank:WP_045308510.1;Name=WP_045308510.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858348.1;locus_tag=VMS06_RS14565;product=type II secretion system minor pseudopilin GspI;protein_id=WP_045308510.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 116535 117188 . + . ID=gene-VMS06_RS14570;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=VMS06_RS14570 NZ_JAVXZI010000012.1 Protein Homology CDS 116535 117188 . + 0 ID=cds-WP_063148390.1;Parent=gene-VMS06_RS14570;Dbxref=GenBank:WP_063148390.1;Name=WP_063148390.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384860.1;locus_tag=VMS06_RS14570;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_063148390.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 117185 118195 . + . ID=gene-VMS06_RS14575;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=VMS06_RS14575 NZ_JAVXZI010000012.1 Protein Homology CDS 117185 118195 . + 0 ID=cds-WP_063148389.1;Parent=gene-VMS06_RS14575;Dbxref=GenBank:WP_063148389.1;Name=WP_063148389.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384859.1;locus_tag=VMS06_RS14575;product=type II secretion system minor pseudopilin GspK;protein_id=WP_063148389.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 118211 119344 . + . ID=gene-VMS06_RS14580;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=VMS06_RS14580 NZ_JAVXZI010000012.1 Protein Homology CDS 118211 119344 . + 0 ID=cds-WP_063148388.1;Parent=gene-VMS06_RS14580;Dbxref=GenBank:WP_063148388.1;Name=WP_063148388.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693717.1;locus_tag=VMS06_RS14580;product=type II secretion system protein GspL;protein_id=WP_063148388.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 119341 119826 . + . ID=gene-VMS06_RS14585;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=VMS06_RS14585 NZ_JAVXZI010000012.1 Protein Homology CDS 119341 119826 . + 0 ID=cds-WP_022647595.1;Parent=gene-VMS06_RS14585;Dbxref=GenBank:WP_022647595.1;Name=WP_022647595.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspM;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693716.1;locus_tag=VMS06_RS14585;product=type II secretion system protein GspM;protein_id=WP_022647595.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 119823 120620 . + . ID=gene-VMS06_RS14590;Name=VMS06_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14590 NZ_JAVXZI010000012.1 Protein Homology CDS 119823 120620 . + 0 ID=cds-WP_023299702.1;Parent=gene-VMS06_RS14590;Dbxref=GenBank:WP_023299702.1;Name=WP_023299702.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693715.1;locus_tag=VMS06_RS14590;product=prepilin peptidase;protein_id=WP_023299702.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 120874 123597 . + . ID=gene-VMS06_RS14595;Name=VMS06_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14595 NZ_JAVXZI010000012.1 Protein Homology CDS 120874 123597 . + 0 ID=cds-WP_038415759.1;Parent=gene-VMS06_RS14595;Dbxref=GenBank:WP_038415759.1;Name=WP_038415759.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570996.1;locus_tag=VMS06_RS14595;product=glycosyl hydrolase family 18 protein;protein_id=WP_038415759.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 123699 124139 . + . ID=gene-VMS06_RS14600;Name=iagB;gbkey=Gene;gene=iagB;gene_biotype=protein_coding;locus_tag=VMS06_RS14600 NZ_JAVXZI010000012.1 Protein Homology CDS 123699 124139 . + 0 ID=cds-WP_023299704.1;Parent=gene-VMS06_RS14600;Dbxref=GenBank:WP_023299704.1;Name=WP_023299704.1;gbkey=CDS;gene=iagB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883183.1;locus_tag=VMS06_RS14600;product=type III secretion system invasion protein IagB;protein_id=WP_023299704.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 124274 126100 . + . ID=gene-VMS06_RS14605;Name=VMS06_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14605 NZ_JAVXZI010000012.1 Protein Homology CDS 124274 126100 . + 0 ID=cds-WP_063148387.1;Parent=gene-VMS06_RS14605;Dbxref=GenBank:WP_063148387.1;Name=WP_063148387.1;Ontology_term=GO:0005975,GO:0004568;gbkey=CDS;go_function=chitinase activity|0004568||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693713.1;locus_tag=VMS06_RS14605;product=chitinase;protein_id=WP_063148387.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 126245 127258 . - . ID=gene-VMS06_RS14610;Name=VMS06_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14610 NZ_JAVXZI010000012.1 Protein Homology CDS 126245 127258 . - 0 ID=cds-WP_022647600.1;Parent=gene-VMS06_RS14610;Dbxref=GenBank:WP_022647600.1;Name=WP_022647600.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459909.1;locus_tag=VMS06_RS14610;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_022647600.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 127351 128787 . - . ID=gene-VMS06_RS14615;Name=VMS06_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14615 NZ_JAVXZI010000012.1 Protein Homology CDS 127351 128787 . - 0 ID=cds-WP_063148386.1;Parent=gene-VMS06_RS14615;Dbxref=GenBank:WP_063148386.1;Name=WP_063148386.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013097337.1;locus_tag=VMS06_RS14615;product=SDR family oxidoreductase;protein_id=WP_063148386.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 128798 129799 . - . ID=gene-VMS06_RS14620;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=VMS06_RS14620 NZ_JAVXZI010000012.1 Protein Homology CDS 128798 129799 . - 0 ID=cds-WP_063148385.1;Parent=gene-VMS06_RS14620;Dbxref=GenBank:WP_063148385.1;Name=WP_063148385.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415391.1;locus_tag=VMS06_RS14620;product=low-specificity L-threonine aldolase;protein_id=WP_063148385.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 129838 131556 . - . ID=gene-VMS06_RS14625;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=VMS06_RS14625 NZ_JAVXZI010000012.1 Protein Homology CDS 129838 131556 . - 0 ID=cds-WP_022647603.1;Parent=gene-VMS06_RS14625;Dbxref=GenBank:WP_022647603.1;Name=WP_022647603.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415392.1;locus_tag=VMS06_RS14625;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_022647603.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 131795 132763 . - . ID=gene-VMS06_RS14630;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=VMS06_RS14630 NZ_JAVXZI010000012.1 Protein Homology CDS 131795 132763 . - 0 ID=cds-WP_063148384.1;Parent=gene-VMS06_RS14630;Dbxref=GenBank:WP_063148384.1;Name=WP_063148384.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226083.1;locus_tag=VMS06_RS14630;product=NADH oxidoreductase;protein_id=WP_063148384.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 132774 134426 . - . ID=gene-VMS06_RS14635;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=VMS06_RS14635 NZ_JAVXZI010000012.1 Protein Homology CDS 132774 134426 . - 0 ID=cds-WP_023299708.1;Parent=gene-VMS06_RS14635;Dbxref=GenBank:WP_023299708.1;Name=WP_023299708.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=VMS06_RS14635;product=hydroxylamine reductase;protein_id=WP_023299708.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 134571 135470 . - . ID=gene-VMS06_RS14640;Name=VMS06_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14640 NZ_JAVXZI010000012.1 Protein Homology CDS 134571 135470 . - 0 ID=cds-WP_022647606.1;Parent=gene-VMS06_RS14640;Dbxref=GenBank:WP_022647606.1;Name=WP_022647606.1;Ontology_term=GO:1903401,GO:0015661;gbkey=CDS;go_function=L-lysine efflux transmembrane transporter activity|0015661||IEA;go_process=L-lysine transmembrane transport|1903401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459915.1;locus_tag=VMS06_RS14640;product=LysO family transporter;protein_id=WP_022647606.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 135649 136344 . - . ID=gene-VMS06_RS14645;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=VMS06_RS14645 NZ_JAVXZI010000012.1 Protein Homology CDS 135649 136344 . - 0 ID=cds-WP_026080729.1;Parent=gene-VMS06_RS14645;Dbxref=GenBank:WP_026080729.1;Name=WP_026080729.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226086.1;locus_tag=VMS06_RS14645;product=aquaporin Z;protein_id=WP_026080729.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 136636 138294 . + . ID=gene-VMS06_RS14650;Name=VMS06_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14650 NZ_JAVXZI010000012.1 Protein Homology CDS 136636 138294 . + 0 ID=cds-WP_023299709.1;Parent=gene-VMS06_RS14650;Dbxref=GenBank:WP_023299709.1;Name=WP_023299709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706761.1;locus_tag=VMS06_RS14650;product=ATP-dependent endonuclease;protein_id=WP_023299709.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 138291 139247 . - . ID=gene-VMS06_RS14655;Name=VMS06_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14655 NZ_JAVXZI010000012.1 Protein Homology CDS 138291 139247 . - 0 ID=cds-WP_038415768.1;Parent=gene-VMS06_RS14655;Dbxref=GenBank:WP_038415768.1;Name=WP_038415768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809411.1;locus_tag=VMS06_RS14655;product=VirK/YbjX family protein;protein_id=WP_038415768.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 139407 140522 . + . ID=gene-VMS06_RS14660;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=VMS06_RS14660 NZ_JAVXZI010000012.1 Protein Homology CDS 139407 140522 . + 0 ID=cds-WP_022647609.1;Parent=gene-VMS06_RS14660;Dbxref=GenBank:WP_022647609.1;Name=WP_022647609.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499995.1;locus_tag=VMS06_RS14660;product=macrolide transporter subunit MacA;protein_id=WP_022647609.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 140519 142459 . + . ID=gene-VMS06_RS14665;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=VMS06_RS14665 NZ_JAVXZI010000012.1 Protein Homology CDS 140519 142459 . + 0 ID=cds-WP_023305795.1;Parent=gene-VMS06_RS14665;Dbxref=GenBank:WP_023305795.1;Name=WP_023305795.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308992.1;locus_tag=VMS06_RS14665;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_023305795.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 142530 142751 . - . ID=gene-VMS06_RS14670;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=VMS06_RS14670 NZ_JAVXZI010000012.1 Protein Homology CDS 142530 142751 . - 0 ID=cds-WP_006174390.1;Parent=gene-VMS06_RS14670;Dbxref=GenBank:WP_006174390.1;Name=WP_006174390.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459920.1;locus_tag=VMS06_RS14670;product=cold shock-like protein CspD;protein_id=WP_006174390.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 143019 143339 . + . ID=gene-VMS06_RS14675;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=VMS06_RS14675 NZ_JAVXZI010000012.1 Protein Homology CDS 143019 143339 . + 0 ID=cds-WP_006174393.1;Parent=gene-VMS06_RS14675;Dbxref=GenBank:WP_006174393.1;Name=WP_006174393.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128368.1;locus_tag=VMS06_RS14675;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_006174393.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 143367 145646 . + . ID=gene-VMS06_RS14680;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=VMS06_RS14680 NZ_JAVXZI010000012.1 Protein Homology CDS 143367 145646 . + 0 ID=cds-WP_022647611.1;Parent=gene-VMS06_RS14680;Dbxref=GenBank:WP_022647611.1;Name=WP_022647611.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308995.1;locus_tag=VMS06_RS14680;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_022647611.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 145900 146349 . + . ID=gene-VMS06_RS14685;Name=VMS06_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14685 NZ_JAVXZI010000012.1 Protein Homology CDS 145900 146349 . + 0 ID=cds-WP_063148382.1;Parent=gene-VMS06_RS14685;Dbxref=GenBank:WP_063148382.1;Name=WP_063148382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883198.1;locus_tag=VMS06_RS14685;product=hypothetical protein;protein_id=WP_063148382.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 146421 146639 . - . ID=gene-VMS06_RS14690;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=VMS06_RS14690 NZ_JAVXZI010000012.1 Protein Homology CDS 146421 146639 . - 0 ID=cds-WP_002211347.1;Parent=gene-VMS06_RS14690;Dbxref=GenBank:WP_002211347.1;Name=WP_002211347.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=VMS06_RS14690;product=translation initiation factor IF-1;protein_id=WP_002211347.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 146924 147628 . - . ID=gene-VMS06_RS14695;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=VMS06_RS14695 NZ_JAVXZI010000012.1 Protein Homology CDS 146924 147628 . - 0 ID=cds-WP_023299713.1;Parent=gene-VMS06_RS14695;Dbxref=GenBank:WP_023299713.1;Name=WP_023299713.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169362.1;locus_tag=VMS06_RS14695;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_023299713.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 147674 149395 . - . ID=gene-VMS06_RS14700;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=VMS06_RS14700 NZ_JAVXZI010000012.1 Protein Homology CDS 147674 149395 . - 0 ID=cds-WP_048966912.1;Parent=gene-VMS06_RS14700;Dbxref=GenBank:WP_048966912.1;Name=WP_048966912.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459932.1;locus_tag=VMS06_RS14700;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_048966912.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 149395 151161 . - . ID=gene-VMS06_RS14705;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=VMS06_RS14705 NZ_JAVXZI010000012.1 Protein Homology CDS 149395 151161 . - 0 ID=cds-WP_063148381.1;Parent=gene-VMS06_RS14705;Dbxref=GenBank:WP_063148381.1;Name=WP_063148381.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459933.1;locus_tag=VMS06_RS14705;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_063148381.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 151276 152244 . - . ID=gene-VMS06_RS14710;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=VMS06_RS14710 NZ_JAVXZI010000012.1 Protein Homology CDS 151276 152244 . - 0 ID=cds-WP_022647616.1;Parent=gene-VMS06_RS14710;Dbxref=GenBank:WP_022647616.1;Name=WP_022647616.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226098.1;locus_tag=VMS06_RS14710;product=thioredoxin-disulfide reductase;protein_id=WP_022647616.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 152788 153282 . + . ID=gene-VMS06_RS14715;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=VMS06_RS14715 NZ_JAVXZI010000012.1 Protein Homology CDS 152788 153282 . + 0 ID=cds-WP_000228469.1;Parent=gene-VMS06_RS14715;Dbxref=GenBank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=VMS06_RS14715;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 153418 157101 . + . ID=gene-VMS06_RS14720;Name=VMS06_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14720 NZ_JAVXZI010000012.1 Protein Homology CDS 153418 157101 . + 0 ID=cds-WP_063148380.1;Parent=gene-VMS06_RS14720;Dbxref=GenBank:WP_063148380.1;Name=WP_063148380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001542260.1;locus_tag=VMS06_RS14720;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=WP_063148380.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 157229 157843 . + . ID=gene-VMS06_RS14725;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=VMS06_RS14725 NZ_JAVXZI010000012.1 Protein Homology CDS 157229 157843 . + 0 ID=cds-WP_022647618.1;Parent=gene-VMS06_RS14725;Dbxref=GenBank:WP_022647618.1;Name=WP_022647618.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016812.1;locus_tag=VMS06_RS14725;product=outer membrane lipoprotein periplasmic chaperone LolA;protein_id=WP_022647618.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 157853 159196 . + . ID=gene-VMS06_RS14730;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=VMS06_RS14730 NZ_JAVXZI010000012.1 Protein Homology CDS 157853 159196 . + 0 ID=cds-WP_032624539.1;Parent=gene-VMS06_RS14730;Dbxref=GenBank:WP_032624539.1;Name=WP_032624539.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=VMS06_RS14730;product=replication-associated recombination protein RarA;protein_id=WP_032624539.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 159289 160581 . + . ID=gene-VMS06_RS14735;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=VMS06_RS14735 NZ_JAVXZI010000012.1 Protein Homology CDS 159289 160581 . + 0 ID=cds-WP_003858266.1;Parent=gene-VMS06_RS14735;Dbxref=GenBank:WP_003858266.1;Name=WP_003858266.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=VMS06_RS14735;product=serine--tRNA ligase;protein_id=WP_003858266.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 160793 163237 . + . ID=gene-VMS06_RS14740;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=VMS06_RS14740 NZ_JAVXZI010000012.1 Protein Homology CDS 160793 163237 . + 0 ID=cds-WP_023299718.1;Parent=gene-VMS06_RS14740;Dbxref=GenBank:WP_023299718.1;Name=WP_023299718.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459940.1;locus_tag=VMS06_RS14740;product=dimethylsulfoxide reductase subunit A;protein_id=WP_023299718.1;transl_table=11 NZ_JAVXZI010000012.1 RefSeq gene 163248 163352 . + . ID=gene-VMS06_RS14745;Name=VMS06_RS14745;end_range=163352,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14745;partial=true NZ_JAVXZI010000012.1 Protein Homology CDS 163248 163352 . + 0 ID=cds-WP_168929095.1-2;Parent=gene-VMS06_RS14745;Dbxref=GenBank:WP_168929095.1;Name=WP_168929095.1;end_range=163352,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=VMS06_RS14745;partial=true;product=4Fe-4S binding protein;protein_id=WP_168929095.1;transl_table=11 ##sequence-region NZ_JAVXZI010000013.1 1 159071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000013.1 RefSeq region 1 159071 . + . ID=NZ_JAVXZI010000013.1:1..159071;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000013.1 RefSeq gene 175 1221 . - . ID=gene-VMS06_RS14750;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=VMS06_RS14750 NZ_JAVXZI010000013.1 Protein Homology CDS 175 1221 . - 0 ID=cds-WP_063148175.1;Parent=gene-VMS06_RS14750;Dbxref=GenBank:WP_063148175.1;Name=WP_063148175.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310438.1;locus_tag=VMS06_RS14750;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_063148175.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 1372 2205 . - . ID=gene-VMS06_RS14755;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=VMS06_RS14755 NZ_JAVXZI010000013.1 Protein Homology CDS 1372 2205 . - 0 ID=cds-WP_017384644.1;Parent=gene-VMS06_RS14755;Dbxref=GenBank:WP_017384644.1;Name=WP_017384644.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310437.1;locus_tag=VMS06_RS14755;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_017384644.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 2541 4919 . + . ID=gene-VMS06_RS14760;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=VMS06_RS14760 NZ_JAVXZI010000013.1 Protein Homology CDS 2541 4919 . + 0 ID=cds-WP_023305974.1;Parent=gene-VMS06_RS14760;Dbxref=GenBank:WP_023305974.1;Name=WP_023305974.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416217.1;locus_tag=VMS06_RS14760;product=phosphoenolpyruvate synthase;protein_id=WP_023305974.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 5154 6554 . + . ID=gene-VMS06_RS14765;Name=VMS06_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14765 NZ_JAVXZI010000013.1 Protein Homology CDS 5154 6554 . + 0 ID=cds-WP_038415905.1;Parent=gene-VMS06_RS14765;Dbxref=GenBank:WP_038415905.1;Name=WP_038415905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693580.1;locus_tag=VMS06_RS14765;product=MFS transporter;protein_id=WP_038415905.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 6558 8933 . + . ID=gene-VMS06_RS14770;Name=VMS06_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14770 NZ_JAVXZI010000013.1 Protein Homology CDS 6558 8933 . + 0 ID=cds-WP_063148174.1;Parent=gene-VMS06_RS14770;Dbxref=GenBank:WP_063148174.1;Name=WP_063148174.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384641.1;locus_tag=VMS06_RS14770;product=glycoside hydrolase family 3 N-terminal domain-containing protein;protein_id=WP_063148174.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 9292 9498 . + . ID=gene-VMS06_RS14775;Name=VMS06_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14775 NZ_JAVXZI010000013.1 GeneMarkS-2+ CDS 9292 9498 . + 0 ID=cds-WP_022647855.1;Parent=gene-VMS06_RS14775;Dbxref=GenBank:WP_022647855.1;Name=WP_022647855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS14775;product=hypothetical protein;protein_id=WP_022647855.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 9900 10007 . - . ID=gene-VMS06_RS14780;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=VMS06_RS14780 NZ_JAVXZI010000013.1 cmsearch antisense_RNA 9900 10007 . - . ID=rna-VMS06_RS14780;Parent=gene-VMS06_RS14780;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS14780;product=antisense sRNA RprA NZ_JAVXZI010000013.1 cmsearch exon 9900 10007 . - . ID=exon-VMS06_RS14780-1;Parent=rna-VMS06_RS14780;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS14780;product=antisense sRNA RprA NZ_JAVXZI010000013.1 RefSeq gene 10217 11332 . - . ID=gene-VMS06_RS14785;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=VMS06_RS14785 NZ_JAVXZI010000013.1 Protein Homology CDS 10217 11332 . - 0 ID=cds-WP_022647856.1;Parent=gene-VMS06_RS14785;Dbxref=GenBank:WP_022647856.1;Name=WP_022647856.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570721.1;locus_tag=VMS06_RS14785;product=AI-2E family transporter YdiK;protein_id=WP_022647856.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 11532 14588 . + . ID=gene-VMS06_RS14790;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=VMS06_RS14790 NZ_JAVXZI010000013.1 Protein Homology CDS 11532 14588 . + 0 ID=cds-WP_063148173.1;Parent=gene-VMS06_RS14790;Dbxref=GenBank:WP_063148173.1;Name=WP_063148173.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189481.1;locus_tag=VMS06_RS14790;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_063148173.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 14585 14995 . + . ID=gene-VMS06_RS14795;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=VMS06_RS14795 NZ_JAVXZI010000013.1 Protein Homology CDS 14585 14995 . + 0 ID=cds-WP_022647858.1;Parent=gene-VMS06_RS14795;Dbxref=GenBank:WP_022647858.1;Name=WP_022647858.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460331.1;locus_tag=VMS06_RS14795;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_022647858.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 15081 15275 . + . ID=gene-VMS06_RS14800;Name=VMS06_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14800 NZ_JAVXZI010000013.1 Protein Homology CDS 15081 15275 . + 0 ID=cds-WP_003857766.1;Parent=gene-VMS06_RS14800;Dbxref=GenBank:WP_003857766.1;Name=WP_003857766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069924.1;locus_tag=VMS06_RS14800;product=YdiH family protein;protein_id=WP_003857766.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 15322 15951 . - . ID=gene-VMS06_RS14805;Name=VMS06_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14805 NZ_JAVXZI010000013.1 Protein Homology CDS 15322 15951 . - 0 ID=cds-WP_063148172.1;Parent=gene-VMS06_RS14805;Dbxref=GenBank:WP_063148172.1;Name=WP_063148172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809051.1;locus_tag=VMS06_RS14805;product=helix-turn-helix domain-containing protein;protein_id=WP_063148172.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 16029 16688 . - . ID=gene-VMS06_RS14810;Name=VMS06_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14810 NZ_JAVXZI010000013.1 Protein Homology CDS 16029 16688 . - 0 ID=cds-WP_022647860.1;Parent=gene-VMS06_RS14810;Dbxref=GenBank:WP_022647860.1;Name=WP_022647860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857763.1;locus_tag=VMS06_RS14810;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_022647860.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 17043 17573 . + . ID=gene-VMS06_RS14815;Name=VMS06_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14815 NZ_JAVXZI010000013.1 Protein Homology CDS 17043 17573 . + 0 ID=cds-WP_022647861.1;Parent=gene-VMS06_RS14815;Dbxref=GenBank:WP_022647861.1;Name=WP_022647861.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809049.1;locus_tag=VMS06_RS14815;product=fimbrial protein;protein_id=WP_022647861.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 17631 18308 . + . ID=gene-VMS06_RS14820;Name=VMS06_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14820 NZ_JAVXZI010000013.1 Protein Homology CDS 17631 18308 . + 0 ID=cds-WP_058677984.1;Parent=gene-VMS06_RS14820;Dbxref=GenBank:WP_058677984.1;Name=WP_058677984.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693575.1;locus_tag=VMS06_RS14820;product=fimbrial biogenesis chaperone;protein_id=WP_058677984.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 18336 20879 . + . ID=gene-VMS06_RS14825;Name=VMS06_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14825 NZ_JAVXZI010000013.1 Protein Homology CDS 18336 20879 . + 0 ID=cds-WP_063148170.1;Parent=gene-VMS06_RS14825;Dbxref=GenBank:WP_063148170.1;Name=WP_063148170.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693574.1;locus_tag=VMS06_RS14825;product=fimbria/pilus outer membrane usher protein;protein_id=WP_063148170.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 20881 21828 . + . ID=gene-VMS06_RS14830;Name=VMS06_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14830 NZ_JAVXZI010000013.1 Protein Homology CDS 20881 21828 . + 0 ID=cds-WP_032676314.1;Parent=gene-VMS06_RS14830;Dbxref=GenBank:WP_032676314.1;Name=WP_032676314.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857755.1;locus_tag=VMS06_RS14830;product=fimbrial protein;protein_id=WP_032676314.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 21840 22352 . + . ID=gene-VMS06_RS14835;Name=VMS06_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14835 NZ_JAVXZI010000013.1 Protein Homology CDS 21840 22352 . + 0 ID=cds-WP_022647865.1;Parent=gene-VMS06_RS14835;Dbxref=GenBank:WP_022647865.1;Name=WP_022647865.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653715.1;locus_tag=VMS06_RS14835;product=fimbrial protein;protein_id=WP_022647865.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 22394 23047 . + . ID=gene-VMS06_RS14840;Name=VMS06_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14840 NZ_JAVXZI010000013.1 Protein Homology CDS 22394 23047 . + 0 ID=cds-WP_063148169.1;Parent=gene-VMS06_RS14840;Dbxref=GenBank:WP_063148169.1;Name=WP_063148169.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857752.1;locus_tag=VMS06_RS14840;product=helix-turn-helix transcriptional regulator;protein_id=WP_063148169.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 23100 25250 . - . ID=gene-VMS06_RS14845;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=VMS06_RS14845 NZ_JAVXZI010000013.1 Protein Homology CDS 23100 25250 . - 0 ID=cds-WP_063148168.1;Parent=gene-VMS06_RS14845;Dbxref=GenBank:WP_063148168.1;Name=WP_063148168.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180308.1;locus_tag=VMS06_RS14845;product=formate dehydrogenase subunit alpha;protein_id=WP_063148168.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 25444 25722 . - . ID=gene-VMS06_RS14850;Name=VMS06_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14850 NZ_JAVXZI010000013.1 Protein Homology CDS 25444 25722 . - 0 ID=cds-WP_022647868.1;Parent=gene-VMS06_RS14850;Dbxref=GenBank:WP_022647868.1;Name=WP_022647868.1;Ontology_term=GO:0071468,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010430215.1;locus_tag=VMS06_RS14850;product=biofilm/acid-resistance regulator YmgB/AriR;protein_id=WP_022647868.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 25752 26072 . - . ID=gene-VMS06_RS14855;Name=VMS06_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14855 NZ_JAVXZI010000013.1 Protein Homology CDS 25752 26072 . - 0 ID=cds-WP_063148167.1;Parent=gene-VMS06_RS14855;Dbxref=GenBank:WP_063148167.1;Name=WP_063148167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007780726.1;locus_tag=VMS06_RS14855;product=hypothetical protein;protein_id=WP_063148167.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 26077 26316 . - . ID=gene-VMS06_RS14860;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=VMS06_RS14860 NZ_JAVXZI010000013.1 Protein Homology CDS 26077 26316 . - 0 ID=cds-WP_046620268.1;Parent=gene-VMS06_RS14860;Dbxref=GenBank:WP_046620268.1;Name=WP_046620268.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096960.1;locus_tag=VMS06_RS14860;product=regulatory protein YcgZ;protein_id=WP_046620268.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 26656 27876 . + . ID=gene-VMS06_RS14865;Name=VMS06_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14865 NZ_JAVXZI010000013.1 Protein Homology CDS 26656 27876 . + 0 ID=cds-WP_323630676.1;Parent=gene-VMS06_RS14865;Dbxref=GenBank:WP_323630676.1;Name=WP_323630676.1;Ontology_term=GO:0007165,GO:0071111,GO:0071949;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA,FAD binding|0071949||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857746.1;locus_tag=VMS06_RS14865;product=diguanylate phosphodiesterase;protein_id=WP_323630676.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 28066 28794 . + . ID=gene-VMS06_RS14870;Name=VMS06_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14870 NZ_JAVXZI010000013.1 Protein Homology CDS 28066 28794 . + 0 ID=cds-WP_038415914.1;Parent=gene-VMS06_RS14870;Dbxref=GenBank:WP_038415914.1;Name=WP_038415914.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500632.1;locus_tag=VMS06_RS14870;product=MerR family transcriptional regulator;protein_id=WP_038415914.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 29116 29484 . + . ID=gene-VMS06_RS14875;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=VMS06_RS14875 NZ_JAVXZI010000013.1 Protein Homology CDS 29116 29484 . + 0 ID=cds-WP_022647873.1;Parent=gene-VMS06_RS14875;Dbxref=GenBank:WP_022647873.1;Name=WP_022647873.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460334.1;locus_tag=VMS06_RS14875;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_022647873.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 29493 30983 . + . ID=gene-VMS06_RS14880;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=VMS06_RS14880 NZ_JAVXZI010000013.1 Protein Homology CDS 29493 30983 . + 0 ID=cds-WP_003857739.1;Parent=gene-VMS06_RS14880;Dbxref=GenBank:WP_003857739.1;Name=WP_003857739.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416198.2;locus_tag=VMS06_RS14880;product=Fe-S cluster assembly protein SufB;protein_id=WP_003857739.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 30993 31739 . + . ID=gene-VMS06_RS14885;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=VMS06_RS14885 NZ_JAVXZI010000013.1 Protein Homology CDS 30993 31739 . + 0 ID=cds-WP_022647874.1;Parent=gene-VMS06_RS14885;Dbxref=GenBank:WP_022647874.1;Name=WP_022647874.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=VMS06_RS14885;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_022647874.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 31714 32985 . + . ID=gene-VMS06_RS14890;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=VMS06_RS14890 NZ_JAVXZI010000013.1 Protein Homology CDS 31714 32985 . + 0 ID=cds-WP_063148165.1;Parent=gene-VMS06_RS14890;Dbxref=GenBank:WP_063148165.1;Name=WP_063148165.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384627.1;locus_tag=VMS06_RS14890;product=Fe-S cluster assembly protein SufD;protein_id=WP_063148165.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 32982 34202 . + . ID=gene-VMS06_RS14895;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=VMS06_RS14895 NZ_JAVXZI010000013.1 Protein Homology CDS 32982 34202 . + 0 ID=cds-WP_045309080.1;Parent=gene-VMS06_RS14895;Dbxref=GenBank:WP_045309080.1;Name=WP_045309080.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310414.1;locus_tag=VMS06_RS14895;product=cysteine desulfurase SufS;protein_id=WP_045309080.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 34217 34633 . + . ID=gene-VMS06_RS14900;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=VMS06_RS14900 NZ_JAVXZI010000013.1 Protein Homology CDS 34217 34633 . + 0 ID=cds-WP_063148164.1;Parent=gene-VMS06_RS14900;Dbxref=GenBank:WP_063148164.1;Name=WP_063148164.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705132.1;locus_tag=VMS06_RS14900;product=cysteine desulfuration protein SufE;protein_id=WP_063148164.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 34731 35744 . + . ID=gene-VMS06_RS14905;Name=ldtE;gbkey=Gene;gene=ldtE;gene_biotype=protein_coding;locus_tag=VMS06_RS14905 NZ_JAVXZI010000013.1 Protein Homology CDS 34731 35744 . + 0 ID=cds-WP_038415919.1;Parent=gene-VMS06_RS14905;Dbxref=GenBank:WP_038415919.1;Name=WP_038415919.1;Ontology_term=GO:0009252,GO:0018104,GO:0016757,GO:0071972;gbkey=CDS;gene=ldtE;go_function=glycosyltransferase activity|0016757||IEA,peptidoglycan L%2CD-transpeptidase activity|0071972||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,peptidoglycan-protein cross-linking|0018104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169743.1;locus_tag=VMS06_RS14905;product=L%2CD-transpeptidase LdtE;protein_id=WP_038415919.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 35805 36041 . - . ID=gene-VMS06_RS14910;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=VMS06_RS14910 NZ_JAVXZI010000013.1 Protein Homology CDS 35805 36041 . - 0 ID=cds-WP_001082307.1;Parent=gene-VMS06_RS14910;Dbxref=GenBank:WP_001082307.1;Name=WP_001082307.1;gbkey=CDS;gene=lpp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460342.1;locus_tag=VMS06_RS14910;product=murein lipoprotein Lpp;protein_id=WP_001082307.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 36354 37775 . - . ID=gene-VMS06_RS14915;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=VMS06_RS14915 NZ_JAVXZI010000013.1 Protein Homology CDS 36354 37775 . - 0 ID=cds-WP_015570703.1;Parent=gene-VMS06_RS14915;Dbxref=GenBank:WP_015570703.1;Name=WP_015570703.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=VMS06_RS14915;product=pyruvate kinase PykF;protein_id=WP_015570703.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 37783 38064 . - . ID=gene-VMS06_RS22905;Name=ynhH;gbkey=Gene;gene=ynhH;gene_biotype=protein_coding;locus_tag=VMS06_RS22905 NZ_JAVXZI010000013.1 Protein Homology CDS 37783 38064 . - 0 ID=cds-WP_418517247.1;Parent=gene-VMS06_RS22905;Dbxref=GenBank:WP_418517247.1;Name=WP_418517247.1;gbkey=CDS;gene=ynhH;inference=COORDINATES: protein motif:HMM:NF049534.1;locus_tag=VMS06_RS22905;product=protein YnhH;protein_id=WP_418517247.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 38153 39298 . - . ID=gene-VMS06_RS14920;Name=VMS06_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14920 NZ_JAVXZI010000013.1 Protein Homology CDS 38153 39298 . - 0 ID=cds-WP_022647879.1;Parent=gene-VMS06_RS14920;Dbxref=GenBank:WP_022647879.1;Name=WP_022647879.1;Ontology_term=GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096949.1;locus_tag=VMS06_RS14920;product=trans-sulfuration enzyme family protein;protein_id=WP_022647879.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 39311 40681 . - . ID=gene-VMS06_RS14925;Name=VMS06_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14925 NZ_JAVXZI010000013.1 Protein Homology CDS 39311 40681 . - 0 ID=cds-WP_063148163.1;Parent=gene-VMS06_RS14925;Dbxref=GenBank:WP_063148163.1;Name=WP_063148163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384623.1;locus_tag=VMS06_RS14925;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_063148163.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 41081 42103 . + . ID=gene-VMS06_RS14930;Name=VMS06_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14930 NZ_JAVXZI010000013.1 Protein Homology CDS 41081 42103 . + 0 ID=cds-WP_063148162.1;Parent=gene-VMS06_RS14930;Dbxref=GenBank:WP_063148162.1;Name=WP_063148162.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010430248.1;locus_tag=VMS06_RS14930;product=methionine ABC transporter ATP-binding protein;protein_id=WP_063148162.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 42096 42764 . + . ID=gene-VMS06_RS14935;Name=VMS06_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14935 NZ_JAVXZI010000013.1 Protein Homology CDS 42096 42764 . + 0 ID=cds-WP_017384621.1;Parent=gene-VMS06_RS14935;Dbxref=GenBank:WP_017384621.1;Name=WP_017384621.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120223.1;locus_tag=VMS06_RS14935;product=methionine ABC transporter permease;protein_id=WP_017384621.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 42788 43600 . + . ID=gene-VMS06_RS14940;Name=VMS06_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14940 NZ_JAVXZI010000013.1 Protein Homology CDS 42788 43600 . + 0 ID=cds-WP_003857677.1;Parent=gene-VMS06_RS14940;Dbxref=GenBank:WP_003857677.1;Name=WP_003857677.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120221.1;locus_tag=VMS06_RS14940;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_003857677.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 43709 43918 . + . ID=gene-VMS06_RS14945;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=VMS06_RS14945 NZ_JAVXZI010000013.1 Protein Homology CDS 43709 43918 . + 0 ID=cds-WP_003857676.1;Parent=gene-VMS06_RS14945;Dbxref=GenBank:WP_003857676.1;Name=WP_003857676.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000528120.1;locus_tag=VMS06_RS14945;product=fumarate hydratase FumD;protein_id=WP_003857676.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 44037 44204 . + . ID=gene-VMS06_RS14950;Name=VMS06_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14950 NZ_JAVXZI010000013.1 Protein Homology CDS 44037 44204 . + 0 ID=cds-WP_022647883.1;Parent=gene-VMS06_RS14950;Dbxref=GenBank:WP_022647883.1;Name=WP_022647883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883542.1;locus_tag=VMS06_RS14950;product=hypothetical protein;protein_id=WP_022647883.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 44349 45755 . + . ID=gene-VMS06_RS14955;Name=VMS06_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14955 NZ_JAVXZI010000013.1 Protein Homology CDS 44349 45755 . + 0 ID=cds-WP_063148161.1;Parent=gene-VMS06_RS14955;Dbxref=GenBank:WP_063148161.1;Name=WP_063148161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000773789.1;locus_tag=VMS06_RS14955;product=DUF1996 domain-containing protein;protein_id=WP_063148161.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 45812 45952 . - . ID=gene-VMS06_RS14960;Name=VMS06_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14960 NZ_JAVXZI010000013.1 Protein Homology CDS 45812 45952 . - 0 ID=cds-WP_003857665.1;Parent=gene-VMS06_RS14960;Dbxref=GenBank:WP_003857665.1;Name=WP_003857665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227329.1;locus_tag=VMS06_RS14960;product=hypothetical protein;protein_id=WP_003857665.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 46078 46860 . + . ID=gene-VMS06_RS14965;Name=VMS06_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14965 NZ_JAVXZI010000013.1 Protein Homology CDS 46078 46860 . + 0 ID=cds-WP_048965526.1;Parent=gene-VMS06_RS14965;Dbxref=GenBank:WP_048965526.1;Name=WP_048965526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809022.1;locus_tag=VMS06_RS14965;product=MBL fold metallo-hydrolase;protein_id=WP_048965526.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 46933 47568 . + . ID=gene-VMS06_RS14970;Name=VMS06_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14970 NZ_JAVXZI010000013.1 Protein Homology CDS 46933 47568 . + 0 ID=cds-WP_022647889.1;Parent=gene-VMS06_RS14970;Dbxref=GenBank:WP_022647889.1;Name=WP_022647889.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227295.1;locus_tag=VMS06_RS14970;product=carbonic anhydrase;protein_id=WP_022647889.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 47597 49192 . - . ID=gene-VMS06_RS14975;Name=VMS06_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14975 NZ_JAVXZI010000013.1 Protein Homology CDS 47597 49192 . - 0 ID=cds-WP_063148160.1;Parent=gene-VMS06_RS14975;Dbxref=GenBank:WP_063148160.1;Name=WP_063148160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693557.1;locus_tag=VMS06_RS14975;product=FAD-NAD(P)-binding protein;protein_id=WP_063148160.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 49315 49391 . - . ID=gene-VMS06_RS14980;Name=VMS06_RS14980;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS14980 NZ_JAVXZI010000013.1 tRNAscan-SE tRNA 49315 49391 . - . ID=rna-VMS06_RS14980;Parent=gene-VMS06_RS14980;anticodon=(pos:complement(49355..49357));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS14980;product=tRNA-Val NZ_JAVXZI010000013.1 tRNAscan-SE exon 49315 49391 . - . ID=exon-VMS06_RS14980-1;Parent=rna-VMS06_RS14980;anticodon=(pos:complement(49355..49357));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS14980;product=tRNA-Val NZ_JAVXZI010000013.1 RefSeq gene 49396 49472 . - . ID=gene-VMS06_RS14985;Name=VMS06_RS14985;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS14985 NZ_JAVXZI010000013.1 tRNAscan-SE tRNA 49396 49472 . - . ID=rna-VMS06_RS14985;Parent=gene-VMS06_RS14985;anticodon=(pos:complement(49436..49438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS14985;product=tRNA-Val NZ_JAVXZI010000013.1 tRNAscan-SE exon 49396 49472 . - . ID=exon-VMS06_RS14985-1;Parent=rna-VMS06_RS14985;anticodon=(pos:complement(49436..49438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS14985;product=tRNA-Val NZ_JAVXZI010000013.1 RefSeq gene 49626 50999 . - . ID=gene-VMS06_RS14990;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=VMS06_RS14990 NZ_JAVXZI010000013.1 Protein Homology CDS 49626 50999 . - 0 ID=cds-WP_032622176.1;Parent=gene-VMS06_RS14990;Dbxref=GenBank:WP_032622176.1;Name=WP_032622176.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460388.2;locus_tag=VMS06_RS14990;product=MdtK family multidrug efflux MATE transporter;protein_id=WP_032622176.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 51225 51866 . + . ID=gene-VMS06_RS14995;Name=VMS06_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS14995 NZ_JAVXZI010000013.1 Protein Homology CDS 51225 51866 . + 0 ID=cds-WP_022647892.1;Parent=gene-VMS06_RS14995;Dbxref=GenBank:WP_022647892.1;Name=WP_022647892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384610.1;locus_tag=VMS06_RS14995;product=riboflavin synthase;protein_id=WP_022647892.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 51897 53045 . - . ID=gene-VMS06_RS15000;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=VMS06_RS15000 NZ_JAVXZI010000013.1 Protein Homology CDS 51897 53045 . - 0 ID=cds-WP_063843878.1;Parent=gene-VMS06_RS15000;Dbxref=GenBank:WP_063843878.1;Name=WP_063843878.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310397.1;locus_tag=VMS06_RS15000;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_063843878.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 53344 54543 . - . ID=gene-VMS06_RS15005;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=VMS06_RS15005 NZ_JAVXZI010000013.1 Protein Homology CDS 53344 54543 . - 0 ID=cds-WP_023299943.1;Parent=gene-VMS06_RS15005;Dbxref=GenBank:WP_023299943.1;Name=WP_023299943.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500599.1;locus_tag=VMS06_RS15005;product=purine nucleoside transporter PunC;protein_id=WP_023299943.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 54656 55567 . + . ID=gene-VMS06_RS15010;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=VMS06_RS15010 NZ_JAVXZI010000013.1 Protein Homology CDS 54656 55567 . + 0 ID=cds-WP_022647895.1;Parent=gene-VMS06_RS15010;Dbxref=GenBank:WP_022647895.1;Name=WP_022647895.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857638.1;locus_tag=VMS06_RS15010;product=DNA-binding transcriptional activator PunR;protein_id=WP_022647895.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 55585 56610 . - . ID=gene-VMS06_RS15015;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=VMS06_RS15015 NZ_JAVXZI010000013.1 Protein Homology CDS 55585 56610 . - 0 ID=cds-WP_006809011.1;Parent=gene-VMS06_RS15015;Dbxref=GenBank:WP_006809011.1;Name=WP_006809011.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=VMS06_RS15015;product=HTH-type transcriptional repressor PurR;protein_id=WP_006809011.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 56908 56997 . + . ID=gene-VMS06_RS15020;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=VMS06_RS15020 NZ_JAVXZI010000013.1 Protein Homology CDS 56908 56997 . + 0 ID=cds-WP_003857632.1;Parent=gene-VMS06_RS15020;Dbxref=GenBank:WP_003857632.1;Name=WP_003857632.1;gbkey=CDS;gene=cydH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165321.1;locus_tag=VMS06_RS15020;product=cytochrome bd-I oxidase subunit CydH;protein_id=WP_003857632.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 57158 58324 . + . ID=gene-VMS06_RS15025;Name=VMS06_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15025 NZ_JAVXZI010000013.1 Protein Homology CDS 57158 58324 . + 0 ID=cds-WP_063148157.1;Parent=gene-VMS06_RS15025;Dbxref=GenBank:WP_063148157.1;Name=WP_063148157.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384607.1;locus_tag=VMS06_RS15025;product=MFS transporter;protein_id=WP_063148157.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 58362 58943 . - . ID=gene-VMS06_RS15030;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=VMS06_RS15030 NZ_JAVXZI010000013.1 Protein Homology CDS 58362 58943 . - 0 ID=cds-WP_017693553.1;Parent=gene-VMS06_RS15030;Dbxref=GenBank:WP_017693553.1;Name=WP_017693553.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079002.1;locus_tag=VMS06_RS15030;product=superoxide dismutase [Fe];protein_id=WP_017693553.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 59066 59824 . - . ID=gene-VMS06_RS15035;Name=VMS06_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15035 NZ_JAVXZI010000013.1 Protein Homology CDS 59066 59824 . - 0 ID=cds-WP_058678002.1;Parent=gene-VMS06_RS15035;Dbxref=GenBank:WP_058678002.1;Name=WP_058678002.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127187.1;locus_tag=VMS06_RS15035;product=C40 family peptidase;protein_id=WP_058678002.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 60163 60510 . + . ID=gene-VMS06_RS15040;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=VMS06_RS15040 NZ_JAVXZI010000013.1 Protein Homology CDS 60163 60510 . + 0 ID=cds-WP_003832760.1;Parent=gene-VMS06_RS15040;Dbxref=GenBank:WP_003832760.1;Name=WP_003832760.1;gbkey=CDS;gene=grxD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460396.1;locus_tag=VMS06_RS15040;product=monothiol glutaredoxin 4;protein_id=WP_003832760.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 60589 61248 . - . ID=gene-VMS06_RS15045;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=VMS06_RS15045 NZ_JAVXZI010000013.1 Protein Homology CDS 60589 61248 . - 0 ID=cds-WP_003857625.1;Parent=gene-VMS06_RS15045;Dbxref=GenBank:WP_003857625.1;Name=WP_003857625.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384604.1;locus_tag=VMS06_RS15045;product=ribonuclease T;protein_id=WP_003857625.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 61345 61752 . - . ID=gene-VMS06_RS15050;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=VMS06_RS15050 NZ_JAVXZI010000013.1 Protein Homology CDS 61345 61752 . - 0 ID=cds-WP_022647898.1;Parent=gene-VMS06_RS15050;Dbxref=GenBank:WP_022647898.1;Name=WP_022647898.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=VMS06_RS15050;product=lactoylglutathione lyase;protein_id=WP_022647898.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 61852 62949 . - . ID=gene-VMS06_RS15055;Name=nemA;gbkey=Gene;gene=nemA;gene_biotype=protein_coding;locus_tag=VMS06_RS15055 NZ_JAVXZI010000013.1 Protein Homology CDS 61852 62949 . - 0 ID=cds-WP_023299948.1;Parent=gene-VMS06_RS15055;Dbxref=GenBank:WP_023299948.1;Name=WP_023299948.1;gbkey=CDS;gene=nemA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227270.1;locus_tag=VMS06_RS15055;product=alkene reductase;protein_id=WP_023299948.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 63003 63602 . - . ID=gene-VMS06_RS15060;Name=VMS06_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15060 NZ_JAVXZI010000013.1 Protein Homology CDS 63003 63602 . - 0 ID=cds-WP_022647900.1;Parent=gene-VMS06_RS15060;Dbxref=GenBank:WP_022647900.1;Name=WP_022647900.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831624.1;locus_tag=VMS06_RS15060;product=TetR/AcrR family transcriptional regulator;protein_id=WP_022647900.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 63644 65269 . - . ID=gene-VMS06_RS15065;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=VMS06_RS15065 NZ_JAVXZI010000013.1 Protein Homology CDS 63644 65269 . - 0 ID=cds-WP_063148155.1;Parent=gene-VMS06_RS15065;Dbxref=GenBank:WP_063148155.1;Name=WP_063148155.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570680.1;locus_tag=VMS06_RS15065;product=phosphoethanolamine transferase EptA;protein_id=WP_063148155.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 65418 65657 . + . ID=gene-VMS06_RS15070;Name=VMS06_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15070 NZ_JAVXZI010000013.1 Protein Homology CDS 65418 65657 . + 0 ID=cds-WP_023299951.1;Parent=gene-VMS06_RS15070;Dbxref=GenBank:WP_023299951.1;Name=WP_023299951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127182.1;locus_tag=VMS06_RS15070;product=DUF1289 domain-containing protein;protein_id=WP_023299951.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 65706 66602 . + . ID=gene-VMS06_RS15075;Name=VMS06_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15075 NZ_JAVXZI010000013.1 Protein Homology CDS 65706 66602 . + 0 ID=cds-WP_003857612.1;Parent=gene-VMS06_RS15075;Dbxref=GenBank:WP_003857612.1;Name=WP_003857612.1;Ontology_term=GO:0016491,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_025305.1;locus_tag=VMS06_RS15075;product=aldo/keto reductase;protein_id=WP_003857612.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 66684 67202 . + . ID=gene-VMS06_RS15080;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=VMS06_RS15080 NZ_JAVXZI010000013.1 Protein Homology CDS 66684 67202 . + 0 ID=cds-WP_022647904.1;Parent=gene-VMS06_RS15080;Dbxref=GenBank:WP_022647904.1;Name=WP_022647904.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570677.1;locus_tag=VMS06_RS15080;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_022647904.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 67181 69214 . - . ID=gene-VMS06_RS15085;Name=VMS06_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15085 NZ_JAVXZI010000013.1 Protein Homology CDS 67181 69214 . - 0 ID=cds-WP_063148176.1;Parent=gene-VMS06_RS15085;Dbxref=GenBank:WP_063148176.1;Name=WP_063148176.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000777625.1;locus_tag=VMS06_RS15085;product=FUSC family protein;protein_id=WP_063148176.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 69214 70074 . - . ID=gene-VMS06_RS15090;Name=VMS06_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15090 NZ_JAVXZI010000013.1 Protein Homology CDS 69214 70074 . - 0 ID=cds-WP_038417029.1;Parent=gene-VMS06_RS15090;Dbxref=GenBank:WP_038417029.1;Name=WP_038417029.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831630.1;locus_tag=VMS06_RS15090;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_038417029.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 70077 70313 . - . ID=gene-VMS06_RS15095;Name=VMS06_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15095 NZ_JAVXZI010000013.1 Protein Homology CDS 70077 70313 . - 0 ID=cds-WP_022647907.1;Parent=gene-VMS06_RS15095;Dbxref=GenBank:WP_022647907.1;Name=WP_022647907.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500581.1;locus_tag=VMS06_RS15095;product=DUF1656 domain-containing protein;protein_id=WP_022647907.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 70501 70941 . + . ID=gene-VMS06_RS15100;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=VMS06_RS15100 NZ_JAVXZI010000013.1 Protein Homology CDS 70501 70941 . + 0 ID=cds-WP_032623345.1;Parent=gene-VMS06_RS15100;Dbxref=GenBank:WP_032623345.1;Name=WP_032623345.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016496284.1;locus_tag=VMS06_RS15100;product=transcriptional regulator SlyA;protein_id=WP_032623345.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 70980 72341 . - . ID=gene-VMS06_RS15105;Name=VMS06_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15105 NZ_JAVXZI010000013.1 Protein Homology CDS 70980 72341 . - 0 ID=cds-WP_045308479.1;Parent=gene-VMS06_RS15105;Dbxref=GenBank:WP_045308479.1;Name=WP_045308479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884331.1;locus_tag=VMS06_RS15105;product=sensor domain-containing diguanylate cyclase;protein_id=WP_045308479.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 72538 73005 . - . ID=gene-VMS06_RS15110;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=VMS06_RS15110 NZ_JAVXZI010000013.1 Protein Homology CDS 72538 73005 . - 0 ID=cds-WP_022647910.1;Parent=gene-VMS06_RS15110;Dbxref=GenBank:WP_022647910.1;Name=WP_022647910.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460408.1;locus_tag=VMS06_RS15110;product=outer membrane lipoprotein SlyB;protein_id=WP_022647910.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 73261 74385 . + . ID=gene-VMS06_RS15115;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=VMS06_RS15115 NZ_JAVXZI010000013.1 Protein Homology CDS 73261 74385 . + 0 ID=cds-WP_032624364.1;Parent=gene-VMS06_RS15115;Dbxref=GenBank:WP_032624364.1;Name=WP_032624364.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227257.1;locus_tag=VMS06_RS15115;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_032624364.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 74479 74802 . + . ID=gene-VMS06_RS15120;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=VMS06_RS15120 NZ_JAVXZI010000013.1 Protein Homology CDS 74479 74802 . + 0 ID=cds-WP_022647912.1;Parent=gene-VMS06_RS15120;Dbxref=GenBank:WP_022647912.1;Name=WP_022647912.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003832783.1;locus_tag=VMS06_RS15120;product=C-type lysozyme inhibitor;protein_id=WP_022647912.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 74860 75516 . + . ID=gene-VMS06_RS15125;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=VMS06_RS15125 NZ_JAVXZI010000013.1 Protein Homology CDS 74860 75516 . + 0 ID=cds-WP_003857601.1;Parent=gene-VMS06_RS15125;Dbxref=GenBank:WP_003857601.1;Name=WP_003857601.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=VMS06_RS15125;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_003857601.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 75642 76916 . + . ID=gene-VMS06_RS15130;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=VMS06_RS15130 NZ_JAVXZI010000013.1 Protein Homology CDS 75642 76916 . + 0 ID=cds-WP_022647913.1;Parent=gene-VMS06_RS15130;Dbxref=GenBank:WP_022647913.1;Name=WP_022647913.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310373.1;locus_tag=VMS06_RS15130;product=tyrosine--tRNA ligase;protein_id=WP_022647913.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 76983 77843 . + . ID=gene-VMS06_RS15135;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=VMS06_RS15135 NZ_JAVXZI010000013.1 Protein Homology CDS 76983 77843 . + 0 ID=cds-WP_063148154.1;Parent=gene-VMS06_RS15135;Dbxref=GenBank:WP_063148154.1;Name=WP_063148154.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227253.1;locus_tag=VMS06_RS15135;product=pyridoxal kinase PdxY;protein_id=WP_063148154.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 77904 78509 . - . ID=gene-VMS06_RS15140;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=VMS06_RS15140 NZ_JAVXZI010000013.1 Protein Homology CDS 77904 78509 . - 0 ID=cds-WP_023299960.1;Parent=gene-VMS06_RS15140;Dbxref=GenBank:WP_023299960.1;Name=WP_023299960.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460414.1;locus_tag=VMS06_RS15140;product=glutathione transferase GstA;protein_id=WP_023299960.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 78615 80123 . - . ID=gene-VMS06_RS15145;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=VMS06_RS15145 NZ_JAVXZI010000013.1 Protein Homology CDS 78615 80123 . - 0 ID=cds-WP_023299961.1;Parent=gene-VMS06_RS15145;Dbxref=GenBank:WP_023299961.1;Name=WP_023299961.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227251.1;locus_tag=VMS06_RS15145;product=dipeptide/tripeptide permease DtpA;protein_id=WP_023299961.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 80732 81367 . - . ID=gene-VMS06_RS15150;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=VMS06_RS15150 NZ_JAVXZI010000013.1 Protein Homology CDS 80732 81367 . - 0 ID=cds-WP_015570668.1;Parent=gene-VMS06_RS15150;Dbxref=GenBank:WP_015570668.1;Name=WP_015570668.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570668.1;locus_tag=VMS06_RS15150;product=endonuclease III;protein_id=WP_015570668.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 81364 82050 . - . ID=gene-VMS06_RS15155;Name=VMS06_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15155 NZ_JAVXZI010000013.1 Protein Homology CDS 81364 82050 . - 0 ID=cds-WP_003857592.1;Parent=gene-VMS06_RS15155;Dbxref=GenBank:WP_003857592.1;Name=WP_003857592.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857592.1;locus_tag=VMS06_RS15155;product=electron transport complex subunit E;protein_id=WP_003857592.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 82053 82673 . - . ID=gene-VMS06_RS15160;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=VMS06_RS15160 NZ_JAVXZI010000013.1 Protein Homology CDS 82053 82673 . - 0 ID=cds-WP_063148153.1;Parent=gene-VMS06_RS15160;Dbxref=GenBank:WP_063148153.1;Name=WP_063148153.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460418.1;locus_tag=VMS06_RS15160;product=electron transport complex subunit RsxG;protein_id=WP_063148153.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 82684 83736 . - . ID=gene-VMS06_RS15165;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=VMS06_RS15165 NZ_JAVXZI010000013.1 Protein Homology CDS 82684 83736 . - 0 ID=cds-WP_063148152.1;Parent=gene-VMS06_RS15165;Dbxref=GenBank:WP_063148152.1;Name=WP_063148152.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227246.1;locus_tag=VMS06_RS15165;product=electron transport complex subunit RsxD;protein_id=WP_063148152.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 83737 85758 . - . ID=gene-VMS06_RS15170;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=VMS06_RS15170 NZ_JAVXZI010000013.1 Protein Homology CDS 83737 85758 . - 0 ID=cds-WP_023306013.1;Parent=gene-VMS06_RS15170;Dbxref=GenBank:WP_023306013.1;Name=WP_023306013.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831644.1;locus_tag=VMS06_RS15170;product=electron transport complex subunit RsxC;protein_id=WP_023306013.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 85751 86329 . - . ID=gene-VMS06_RS15175;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=VMS06_RS15175 NZ_JAVXZI010000013.1 Protein Homology CDS 85751 86329 . - 0 ID=cds-WP_015570664.1;Parent=gene-VMS06_RS15175;Dbxref=GenBank:WP_015570664.1;Name=WP_015570664.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384589.1;locus_tag=VMS06_RS15175;product=electron transport complex subunit RsxB;protein_id=WP_015570664.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 86329 86910 . - . ID=gene-VMS06_RS15180;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=VMS06_RS15180 NZ_JAVXZI010000013.1 Protein Homology CDS 86329 86910 . - 0 ID=cds-WP_022647920.1;Parent=gene-VMS06_RS15180;Dbxref=GenBank:WP_022647920.1;Name=WP_022647920.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=VMS06_RS15180;product=electron transport complex subunit RsxA;protein_id=WP_022647920.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 86987 87427 . - . ID=gene-VMS06_RS15185;Name=VMS06_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15185 NZ_JAVXZI010000013.1 Protein Homology CDS 86987 87427 . - 0 ID=cds-WP_015570663.1;Parent=gene-VMS06_RS15185;Dbxref=GenBank:WP_015570663.1;Name=WP_015570663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460423.1;locus_tag=VMS06_RS15185;product=DUF2569 domain-containing protein;protein_id=WP_015570663.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 87513 87728 . - . ID=gene-VMS06_RS15190;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=VMS06_RS15190 NZ_JAVXZI010000013.1 Protein Homology CDS 87513 87728 . - 0 ID=cds-WP_000217941.1;Parent=gene-VMS06_RS15190;Dbxref=GenBank:WP_000217941.1;Name=WP_000217941.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096896.1;locus_tag=VMS06_RS15190;product=transcription modulator YdgT;protein_id=WP_000217941.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 87958 88083 . - . ID=gene-VMS06_RS15195;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=VMS06_RS15195 NZ_JAVXZI010000013.1 Protein Homology CDS 87958 88083 . - 0 ID=cds-WP_151884424.1;Parent=gene-VMS06_RS15195;Dbxref=GenBank:WP_151884424.1;Name=WP_151884424.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310360.1;locus_tag=VMS06_RS15195;product=division septum protein Blr;protein_id=WP_151884424.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 88323 89363 . + . ID=gene-VMS06_RS15200;Name=VMS06_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15200 NZ_JAVXZI010000013.1 Protein Homology CDS 88323 89363 . + 0 ID=cds-WP_023306015.1;Parent=gene-VMS06_RS15200;Dbxref=GenBank:WP_023306015.1;Name=WP_023306015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310359.2;locus_tag=VMS06_RS15200;product=oxidoreductase;protein_id=WP_023306015.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 89420 90418 . - . ID=gene-VMS06_RS15205;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=VMS06_RS15205 NZ_JAVXZI010000013.1 Protein Homology CDS 89420 90418 . - 0 ID=cds-WP_022647922.1;Parent=gene-VMS06_RS15205;Dbxref=GenBank:WP_022647922.1;Name=WP_022647922.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857574.1;locus_tag=VMS06_RS15205;product=adenosine deaminase;protein_id=WP_022647922.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 90515 91687 . - . ID=gene-VMS06_RS15210;Name=VMS06_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15210 NZ_JAVXZI010000013.1 Protein Homology CDS 90515 91687 . - 0 ID=cds-WP_063148151.1;Parent=gene-VMS06_RS15210;Dbxref=GenBank:WP_063148151.1;Name=WP_063148151.1;Ontology_term=GO:0071265,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693545.1;locus_tag=VMS06_RS15210;product=MalY/PatB family protein;protein_id=WP_063148151.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 91737 93329 . - . ID=gene-VMS06_RS15215;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=VMS06_RS15215 NZ_JAVXZI010000013.1 Protein Homology CDS 91737 93329 . - 0 ID=cds-WP_023299967.1;Parent=gene-VMS06_RS15215;Dbxref=GenBank:WP_023299967.1;Name=WP_023299967.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=malX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226716.1;locus_tag=VMS06_RS15215;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_023299967.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 93509 94537 . + . ID=gene-VMS06_RS15220;Name=VMS06_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15220 NZ_JAVXZI010000013.1 Protein Homology CDS 93509 94537 . + 0 ID=cds-WP_023299968.1;Parent=gene-VMS06_RS15220;Dbxref=GenBank:WP_023299968.1;Name=WP_023299968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384586.1;locus_tag=VMS06_RS15220;product=Mal regulon transcriptional regulator MalI;protein_id=WP_023299968.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 94593 96119 . - . ID=gene-VMS06_RS15225;Name=VMS06_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15225 NZ_JAVXZI010000013.1 Protein Homology CDS 94593 96119 . - 0 ID=cds-WP_022647926.1;Parent=gene-VMS06_RS15225;Dbxref=GenBank:WP_022647926.1;Name=WP_022647926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000751747.1;locus_tag=VMS06_RS15225;product=YdgA family protein;protein_id=WP_022647926.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 96219 97394 . - . ID=gene-VMS06_RS15230;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=VMS06_RS15230 NZ_JAVXZI010000013.1 Protein Homology CDS 96219 97394 . - 0 ID=cds-WP_032624354.1;Parent=gene-VMS06_RS15230;Dbxref=GenBank:WP_032624354.1;Name=WP_032624354.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460428.1;locus_tag=VMS06_RS15230;product=mannose-6-phosphate isomerase;protein_id=WP_032624354.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 97594 99240 . + . ID=gene-VMS06_RS15235;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=VMS06_RS15235 NZ_JAVXZI010000013.1 Protein Homology CDS 97594 99240 . + 0 ID=cds-WP_022647928.1;Parent=gene-VMS06_RS15235;Dbxref=GenBank:WP_022647928.1;Name=WP_022647928.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000066594.1;locus_tag=VMS06_RS15235;product=class I fumarate hydratase FumA;protein_id=WP_022647928.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 99423 100817 . + . ID=gene-VMS06_RS15240;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=VMS06_RS15240 NZ_JAVXZI010000013.1 Protein Homology CDS 99423 100817 . + 0 ID=cds-WP_045308487.1;Parent=gene-VMS06_RS15240;Dbxref=GenBank:WP_045308487.1;Name=WP_045308487.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884315.1;locus_tag=VMS06_RS15240;product=class II fumarate hydratase;protein_id=WP_045308487.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 100818 101747 . - . ID=gene-VMS06_RS15245;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=VMS06_RS15245 NZ_JAVXZI010000013.1 Protein Homology CDS 100818 101747 . - 0 ID=cds-WP_022647930.1;Parent=gene-VMS06_RS15245;Dbxref=GenBank:WP_022647930.1;Name=WP_022647930.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570654.1;locus_tag=VMS06_RS15245;product=DNA replication terminus site-binding protein;protein_id=WP_022647930.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 101822 103120 . - . ID=gene-VMS06_RS15250;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=VMS06_RS15250 NZ_JAVXZI010000013.1 Protein Homology CDS 101822 103120 . - 0 ID=cds-WP_045622834.1;Parent=gene-VMS06_RS15250;Dbxref=GenBank:WP_045622834.1;Name=WP_045622834.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000732964.1;locus_tag=VMS06_RS15250;product=two-component system sensor histidine kinase RstB;protein_id=WP_045622834.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 103446 103865 . - . ID=gene-VMS06_RS15255;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=VMS06_RS15255 NZ_JAVXZI010000013.1 Protein Homology CDS 103446 103865 . - 0 ID=cds-WP_032671145.1;Parent=gene-VMS06_RS15255;Dbxref=GenBank:WP_032671145.1;Name=WP_032671145.1;gbkey=CDS;gene=iraM;inference=COORDINATES: protein motif:HMM:NF007393.0;locus_tag=VMS06_RS15255;product=anti-adapter protein IraM;protein_id=WP_032671145.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 104255 104971 . - . ID=gene-VMS06_RS15260;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=VMS06_RS15260 NZ_JAVXZI010000013.1 Protein Homology CDS 104255 104971 . - 0 ID=cds-WP_063148150.1;Parent=gene-VMS06_RS15260;Dbxref=GenBank:WP_063148150.1;Name=WP_063148150.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010430424.1;locus_tag=VMS06_RS15260;product=two-component system response regulator RstA;protein_id=WP_063148150.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 105099 105434 . + . ID=gene-VMS06_RS15265;Name=VMS06_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15265 NZ_JAVXZI010000013.1 Protein Homology CDS 105099 105434 . + 0 ID=cds-WP_022647934.1;Parent=gene-VMS06_RS15265;Dbxref=GenBank:WP_022647934.1;Name=WP_022647934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226726.1;locus_tag=VMS06_RS15265;product=GlpM family protein;protein_id=WP_022647934.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 105431 106153 . - . ID=gene-VMS06_RS15270;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=VMS06_RS15270 NZ_JAVXZI010000013.1 Protein Homology CDS 105431 106153 . - 0 ID=cds-WP_022647935.1;Parent=gene-VMS06_RS15270;Dbxref=GenBank:WP_022647935.1;Name=WP_022647935.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500548.1;locus_tag=VMS06_RS15270;product=dihydromonapterin reductase;protein_id=WP_022647935.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 106193 107575 . - . ID=gene-VMS06_RS15275;Name=VMS06_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15275 NZ_JAVXZI010000013.1 Protein Homology CDS 106193 107575 . - 0 ID=cds-WP_023306086.1;Parent=gene-VMS06_RS15275;Dbxref=GenBank:WP_023306086.1;Name=WP_023306086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310338.1;locus_tag=VMS06_RS15275;product=amino acid permease;protein_id=WP_023306086.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 107761 108705 . - . ID=gene-VMS06_RS15280;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=VMS06_RS15280 NZ_JAVXZI010000013.1 Protein Homology CDS 107761 108705 . - 0 ID=cds-WP_022647937.1;Parent=gene-VMS06_RS15280;Dbxref=GenBank:WP_022647937.1;Name=WP_022647937.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460438.1;locus_tag=VMS06_RS15280;product=DUF1471 family protein YdgH;protein_id=WP_022647937.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 109241 110770 . + . ID=gene-VMS06_RS15285;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=VMS06_RS15285 NZ_JAVXZI010000013.1 Protein Homology CDS 109241 110770 . + 0 ID=cds-WP_017384575.1;Parent=gene-VMS06_RS15285;Dbxref=GenBank:WP_017384575.1;Name=WP_017384575.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226733.1;locus_tag=VMS06_RS15285;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_017384575.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 110781 112169 . + . ID=gene-VMS06_RS15290;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=VMS06_RS15290 NZ_JAVXZI010000013.1 Protein Homology CDS 110781 112169 . + 0 ID=cds-WP_022647939.1;Parent=gene-VMS06_RS15290;Dbxref=GenBank:WP_022647939.1;Name=WP_022647939.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=VMS06_RS15290;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_022647939.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 112277 113389 . + . ID=gene-VMS06_RS15295;Name=VMS06_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15295 NZ_JAVXZI010000013.1 Protein Homology CDS 112277 113389 . + 0 ID=cds-WP_022647940.1;Parent=gene-VMS06_RS15295;Dbxref=GenBank:WP_022647940.1;Name=WP_022647940.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857538.1;locus_tag=VMS06_RS15295;product=mechanosensitive ion channel family protein;protein_id=WP_022647940.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 113428 114378 . - . ID=gene-VMS06_RS15300;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=VMS06_RS15300 NZ_JAVXZI010000013.1 Protein Homology CDS 113428 114378 . - 0 ID=cds-WP_003857535.1;Parent=gene-VMS06_RS15300;Dbxref=GenBank:WP_003857535.1;Name=WP_003857535.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309941.1;locus_tag=VMS06_RS15300;product=universal stress protein UspE;protein_id=WP_003857535.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 114516 115268 . - . ID=gene-VMS06_RS15305;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=VMS06_RS15305 NZ_JAVXZI010000013.1 Protein Homology CDS 114516 115268 . - 0 ID=cds-WP_000611906.1;Parent=gene-VMS06_RS15305;Dbxref=GenBank:WP_000611906.1;Name=WP_000611906.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=VMS06_RS15305;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_000611906.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 115452 115967 . - . ID=gene-VMS06_RS15310;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=VMS06_RS15310 NZ_JAVXZI010000013.1 Protein Homology CDS 115452 115967 . - 0 ID=cds-WP_063148149.1;Parent=gene-VMS06_RS15310;Dbxref=GenBank:WP_063148149.1;Name=WP_063148149.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415851.1;locus_tag=VMS06_RS15310;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_063148149.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 115977 117503 . - . ID=gene-VMS06_RS15315;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=VMS06_RS15315 NZ_JAVXZI010000013.1 Protein Homology CDS 115977 117503 . - 0 ID=cds-WP_045622841.1;Parent=gene-VMS06_RS15315;Dbxref=GenBank:WP_045622841.1;Name=WP_045622841.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415852.2;locus_tag=VMS06_RS15315;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_045622841.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 117550 118995 . - . ID=gene-VMS06_RS15320;Name=VMS06_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15320 NZ_JAVXZI010000013.1 Protein Homology CDS 117550 118995 . - 0 ID=cds-WP_063148148.1;Parent=gene-VMS06_RS15320;Dbxref=GenBank:WP_063148148.1;Name=WP_063148148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309948.1;locus_tag=VMS06_RS15320;product=M20 family metallopeptidase;protein_id=WP_063148148.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 118995 120305 . - . ID=gene-VMS06_RS15325;Name=VMS06_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15325 NZ_JAVXZI010000013.1 Protein Homology CDS 118995 120305 . - 0 ID=cds-WP_063148147.1;Parent=gene-VMS06_RS15325;Dbxref=GenBank:WP_063148147.1;Name=WP_063148147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857525.1;locus_tag=VMS06_RS15325;product=M20 family metallo-hydrolase;protein_id=WP_063148147.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 120481 121392 . + . ID=gene-VMS06_RS15330;Name=VMS06_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15330 NZ_JAVXZI010000013.1 Protein Homology CDS 120481 121392 . + 0 ID=cds-WP_046620072.1;Parent=gene-VMS06_RS15330;Dbxref=GenBank:WP_046620072.1;Name=WP_046620072.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010430458.1;locus_tag=VMS06_RS15330;product=LysR family transcriptional regulator;protein_id=WP_046620072.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 121743 122306 . + . ID=gene-VMS06_RS15335;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=VMS06_RS15335 NZ_JAVXZI010000013.1 Protein Homology CDS 121743 122306 . + 0 ID=cds-WP_023299979.1;Parent=gene-VMS06_RS15335;Dbxref=GenBank:WP_023299979.1;Name=WP_023299979.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006174994.1;locus_tag=VMS06_RS15335;product=DNA endonuclease SmrA;protein_id=WP_023299979.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 122316 123974 . - . ID=gene-VMS06_RS15340;Name=tcp;gbkey=Gene;gene=tcp;gene_biotype=protein_coding;locus_tag=VMS06_RS15340 NZ_JAVXZI010000013.1 Protein Homology CDS 122316 123974 . - 0 ID=cds-WP_063148146.1;Parent=gene-VMS06_RS15340;Dbxref=GenBank:WP_063148146.1;Name=WP_063148146.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888;gbkey=CDS;gene=tcp;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169836.1;locus_tag=VMS06_RS15340;product=methyl-accepting chemotaxis citrate transducer;protein_id=WP_063148146.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 124119 124985 . + . ID=gene-VMS06_RS15345;Name=VMS06_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15345 NZ_JAVXZI010000013.1 Protein Homology CDS 124119 124985 . + 0 ID=cds-WP_063148145.1;Parent=gene-VMS06_RS15345;Dbxref=GenBank:WP_063148145.1;Name=WP_063148145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884301.1;locus_tag=VMS06_RS15345;product=aldo/keto reductase family oxidoreductase;protein_id=WP_063148145.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 125032 125232 . - . ID=gene-VMS06_RS15350;Name=VMS06_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15350 NZ_JAVXZI010000013.1 Protein Homology CDS 125032 125232 . - 0 ID=cds-WP_023299982.1;Parent=gene-VMS06_RS15350;Dbxref=GenBank:WP_023299982.1;Name=WP_023299982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570638.1;locus_tag=VMS06_RS15350;product=hypothetical protein;protein_id=WP_023299982.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 125867 128296 . + . ID=gene-VMS06_RS15355;Name=VMS06_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15355 NZ_JAVXZI010000013.1 Protein Homology CDS 125867 128296 . + 0 ID=cds-WP_063148144.1;Parent=gene-VMS06_RS15355;Dbxref=GenBank:WP_063148144.1;Name=WP_063148144.1;Ontology_term=GO:0016614,GO:0048038,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161314.1;locus_tag=VMS06_RS15355;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_063148144.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 128383 130659 . - . ID=gene-VMS06_RS15360;Name=pqqF;gbkey=Gene;gene=pqqF;gene_biotype=protein_coding;locus_tag=VMS06_RS15360 NZ_JAVXZI010000013.1 Protein Homology CDS 128383 130659 . - 0 ID=cds-WP_063148143.1;Parent=gene-VMS06_RS15360;Dbxref=GenBank:WP_063148143.1;Name=WP_063148143.1;Ontology_term=GO:0006508,GO:0018189,GO:0004222,GO:0008270;gbkey=CDS;gene=pqqF;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384565.1;locus_tag=VMS06_RS15360;product=pyrroloquinoline quinone biosynthesis protein PqqF;protein_id=WP_063148143.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 130665 131807 . - . ID=gene-VMS06_RS15365;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=VMS06_RS15365 NZ_JAVXZI010000013.1 Protein Homology CDS 130665 131807 . - 0 ID=cds-WP_063145983.1;Parent=gene-VMS06_RS15365;Dbxref=GenBank:WP_063145983.1;Name=WP_063145983.1;Ontology_term=GO:0018149,GO:0018189,GO:0051539;gbkey=CDS;gene=pqqE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227067.1;locus_tag=VMS06_RS15365;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_063145983.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 131794 132072 . - . ID=gene-VMS06_RS15370;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=VMS06_RS15370 NZ_JAVXZI010000013.1 Protein Homology CDS 131794 132072 . - 0 ID=cds-WP_003857508.1;Parent=gene-VMS06_RS15370;Dbxref=GenBank:WP_003857508.1;Name=WP_003857508.1;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227066.1;locus_tag=VMS06_RS15370;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=WP_003857508.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 132075 132830 . - . ID=gene-VMS06_RS15375;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=VMS06_RS15375 NZ_JAVXZI010000013.1 Protein Homology CDS 132075 132830 . - 0 ID=cds-WP_023306095.1;Parent=gene-VMS06_RS15375;Dbxref=GenBank:WP_023306095.1;Name=WP_023306095.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227065.1;locus_tag=VMS06_RS15375;product=pyrroloquinoline-quinone synthase PqqC;protein_id=WP_023306095.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 132833 133750 . - . ID=gene-VMS06_RS15380;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=VMS06_RS15380 NZ_JAVXZI010000013.1 Protein Homology CDS 132833 133750 . - 0 ID=cds-WP_063148142.1;Parent=gene-VMS06_RS15380;Dbxref=GenBank:WP_063148142.1;Name=WP_063148142.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366528.1;locus_tag=VMS06_RS15380;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=WP_063148142.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 133806 133877 . - . ID=gene-VMS06_RS15385;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=VMS06_RS15385 NZ_JAVXZI010000013.1 Protein Homology CDS 133806 133877 . - 0 ID=cds-WP_002905689.1;Parent=gene-VMS06_RS15385;Dbxref=GenBank:WP_002905689.1;Name=WP_002905689.1;Ontology_term=GO:0018189,GO:0003824;gbkey=CDS;gene=pqqA;go_function=catalytic activity|0003824||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245082.1;locus_tag=VMS06_RS15385;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=WP_002905689.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 134016 135035 . - . ID=gene-VMS06_RS15390;Name=VMS06_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15390 NZ_JAVXZI010000013.1 Protein Homology CDS 134016 135035 . - 0 ID=cds-WP_063148141.1;Parent=gene-VMS06_RS15390;Dbxref=GenBank:WP_063148141.1;Name=WP_063148141.1;Ontology_term=GO:0006508,GO:0046872,GO:0070573;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metallodipeptidase activity|0070573||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227063.1;locus_tag=VMS06_RS15390;product=dipeptidase;protein_id=WP_063148141.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 135291 135737 . + . ID=gene-VMS06_RS15395;Name=VMS06_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15395 NZ_JAVXZI010000013.1 Protein Homology CDS 135291 135737 . + 0 ID=cds-WP_063148140.1;Parent=gene-VMS06_RS15395;Dbxref=GenBank:WP_063148140.1;Name=WP_063148140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384560.1;locus_tag=VMS06_RS15395;product=hypothetical protein;protein_id=WP_063148140.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 135805 136152 . - . ID=gene-VMS06_RS15400;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=VMS06_RS15400 NZ_JAVXZI010000013.1 Protein Homology CDS 135805 136152 . - 0 ID=cds-WP_038415976.1;Parent=gene-VMS06_RS15400;Dbxref=GenBank:WP_038415976.1;Name=WP_038415976.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=VMS06_RS15400;product=HNH nuclease YajD;protein_id=WP_038415976.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 136361 137395 . + . ID=gene-VMS06_RS15405;Name=VMS06_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15405 NZ_JAVXZI010000013.1 Protein Homology CDS 136361 137395 . + 0 ID=cds-WP_058678024.1;Parent=gene-VMS06_RS15405;Dbxref=GenBank:WP_058678024.1;Name=WP_058678024.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384559.1;locus_tag=VMS06_RS15405;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_058678024.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 137388 138335 . + . ID=gene-VMS06_RS15410;Name=VMS06_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15410 NZ_JAVXZI010000013.1 Protein Homology CDS 137388 138335 . + 0 ID=cds-WP_063148139.1;Parent=gene-VMS06_RS15410;Dbxref=GenBank:WP_063148139.1;Name=WP_063148139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384558.1;locus_tag=VMS06_RS15410;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_063148139.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 138332 139372 . - . ID=gene-VMS06_RS15415;Name=VMS06_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15415 NZ_JAVXZI010000013.1 Protein Homology CDS 138332 139372 . - 0 ID=cds-WP_003857467.1;Parent=gene-VMS06_RS15415;Dbxref=GenBank:WP_003857467.1;Name=WP_003857467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808892.1;locus_tag=VMS06_RS15415;product=AI-2E family transporter;protein_id=WP_003857467.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq pseudogene 139505 139675 . + . ID=gene-VMS06_RS22910;Name=VMS06_RS22910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22910;pseudo=true NZ_JAVXZI010000013.1 Protein Homology CDS 139505 139675 . + 0 ID=cds-VMS06_RS22910;Parent=gene-VMS06_RS22910;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001334396.1;locus_tag=VMS06_RS22910;product=protein YdgV;pseudo=true;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 139793 140155 . + . ID=gene-VMS06_RS15420;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=VMS06_RS15420 NZ_JAVXZI010000013.1 Protein Homology CDS 139793 140155 . + 0 ID=cds-WP_032624865.1;Parent=gene-VMS06_RS15420;Dbxref=GenBank:WP_032624865.1;Name=WP_032624865.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460442.1;locus_tag=VMS06_RS15420;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_032624865.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 140142 140471 . + . ID=gene-VMS06_RS15425;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=VMS06_RS15425 NZ_JAVXZI010000013.1 Protein Homology CDS 140142 140471 . + 0 ID=cds-WP_022647960.1;Parent=gene-VMS06_RS15425;Dbxref=GenBank:WP_022647960.1;Name=WP_022647960.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310332.1;locus_tag=VMS06_RS15425;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_022647960.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 140477 141298 . - . ID=gene-VMS06_RS15430;Name=VMS06_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15430 NZ_JAVXZI010000013.1 Protein Homology CDS 140477 141298 . - 0 ID=cds-WP_023299991.1;Parent=gene-VMS06_RS15430;Dbxref=GenBank:WP_023299991.1;Name=WP_023299991.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808888.1;locus_tag=VMS06_RS15430;product=trypsin-like serine peptidase;protein_id=WP_023299991.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 141401 141484 . - . ID=gene-VMS06_RS22915;Name=ydgU;gbkey=Gene;gene=ydgU;gene_biotype=protein_coding;locus_tag=VMS06_RS22915 NZ_JAVXZI010000013.1 Protein Homology CDS 141401 141484 . - 0 ID=cds-WP_100148715.1;Parent=gene-VMS06_RS22915;Dbxref=GenBank:WP_100148715.1;Name=WP_100148715.1;gbkey=CDS;gene=ydgU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_437890703.1;locus_tag=VMS06_RS22915;product=small membrane protein YdgU;protein_id=WP_100148715.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 141577 141882 . - . ID=gene-VMS06_RS15435;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=VMS06_RS15435 NZ_JAVXZI010000013.1 Protein Homology CDS 141577 141882 . - 0 ID=cds-WP_003857459.1;Parent=gene-VMS06_RS15435;Dbxref=GenBank:WP_003857459.1;Name=WP_003857459.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007865075.1;locus_tag=VMS06_RS15435;product=acid resistance repetitive basic protein Asr;protein_id=WP_003857459.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 142031 143515 . - . ID=gene-VMS06_RS15440;Name=VMS06_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15440 NZ_JAVXZI010000013.1 Protein Homology CDS 142031 143515 . - 0 ID=cds-WP_063148138.1;Parent=gene-VMS06_RS15440;Dbxref=GenBank:WP_063148138.1;Name=WP_063148138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010430546.1;locus_tag=VMS06_RS15440;product=carboxypeptidase M32;protein_id=WP_063148138.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 143590 144843 . - . ID=gene-VMS06_RS15445;Name=VMS06_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15445 NZ_JAVXZI010000013.1 Protein Homology CDS 143590 144843 . - 0 ID=cds-WP_022647964.1;Parent=gene-VMS06_RS15445;Dbxref=GenBank:WP_022647964.1;Name=WP_022647964.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384556.1;locus_tag=VMS06_RS15445;product=MFS transporter;protein_id=WP_022647964.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 144965 145870 . + . ID=gene-VMS06_RS15450;Name=VMS06_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15450 NZ_JAVXZI010000013.1 Protein Homology CDS 144965 145870 . + 0 ID=cds-WP_063148137.1;Parent=gene-VMS06_RS15450;Dbxref=GenBank:WP_063148137.1;Name=WP_063148137.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010430552.1;locus_tag=VMS06_RS15450;product=LysR family transcriptional regulator;protein_id=WP_063148137.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 145992 147212 . + . ID=gene-VMS06_RS15455;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=VMS06_RS15455 NZ_JAVXZI010000013.1 Protein Homology CDS 145992 147212 . + 0 ID=cds-WP_022647966.1;Parent=gene-VMS06_RS15455;Dbxref=GenBank:WP_022647966.1;Name=WP_022647966.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310327.1;locus_tag=VMS06_RS15455;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_022647966.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 147344 148039 . + . ID=gene-VMS06_RS15460;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=VMS06_RS15460 NZ_JAVXZI010000013.1 Protein Homology CDS 147344 148039 . + 0 ID=cds-WP_038415982.1;Parent=gene-VMS06_RS15460;Dbxref=GenBank:WP_038415982.1;Name=WP_038415982.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=VMS06_RS15460;product=dethiobiotin synthase;protein_id=WP_038415982.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 147974 149284 . - . ID=gene-VMS06_RS15465;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=VMS06_RS15465 NZ_JAVXZI010000013.1 Protein Homology CDS 147974 149284 . - 0 ID=cds-WP_063148136.1;Parent=gene-VMS06_RS15465;Dbxref=GenBank:WP_063148136.1;Name=WP_063148136.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006175015.1;locus_tag=VMS06_RS15465;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_063148136.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 149389 150537 . - . ID=gene-VMS06_RS15470;Name=osmV;gbkey=Gene;gene=osmV;gene_biotype=protein_coding;locus_tag=VMS06_RS15470 NZ_JAVXZI010000013.1 Protein Homology CDS 149389 150537 . - 0 ID=cds-WP_022647969.1;Parent=gene-VMS06_RS15470;Dbxref=GenBank:WP_022647969.1;Name=WP_022647969.1;gbkey=CDS;gene=osmV;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460451.1;locus_tag=VMS06_RS15470;product=osmoprotectant ABC transporter ATP-binding protein OsmV;protein_id=WP_022647969.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 150537 151184 . - . ID=gene-VMS06_RS15475;Name=osmW;gbkey=Gene;gene=osmW;gene_biotype=protein_coding;locus_tag=VMS06_RS15475 NZ_JAVXZI010000013.1 Protein Homology CDS 150537 151184 . - 0 ID=cds-WP_063148135.1;Parent=gene-VMS06_RS15475;Dbxref=GenBank:WP_063148135.1;Name=WP_063148135.1;gbkey=CDS;gene=osmW;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460452.1;locus_tag=VMS06_RS15475;product=osmoprotectant ABC transporter permease OsmW;protein_id=WP_063148135.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 151193 152092 . - . ID=gene-VMS06_RS15480;Name=osmX;gbkey=Gene;gene=osmX;gene_biotype=protein_coding;locus_tag=VMS06_RS15480 NZ_JAVXZI010000013.1 Protein Homology CDS 151193 152092 . - 0 ID=cds-WP_017694085.1;Parent=gene-VMS06_RS15480;Dbxref=GenBank:WP_017694085.1;Name=WP_017694085.1;gbkey=CDS;gene=osmX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857443.1;locus_tag=VMS06_RS15480;product=osmoprotectant ABC transporter substrate-binding protein OsmX;protein_id=WP_017694085.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 152111 152821 . - . ID=gene-VMS06_RS15485;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=VMS06_RS15485 NZ_JAVXZI010000013.1 Protein Homology CDS 152111 152821 . - 0 ID=cds-WP_022647971.1;Parent=gene-VMS06_RS15485;Dbxref=GenBank:WP_022647971.1;Name=WP_022647971.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884281.1;locus_tag=VMS06_RS15485;product=osmoprotectant ABC transporter permease OsmY;protein_id=WP_022647971.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 153083 153826 . - . ID=gene-VMS06_RS15490;Name=VMS06_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15490 NZ_JAVXZI010000013.1 Protein Homology CDS 153083 153826 . - 0 ID=cds-WP_045621656.1;Parent=gene-VMS06_RS15490;Dbxref=GenBank:WP_045621656.1;Name=WP_045621656.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883641.1;locus_tag=VMS06_RS15490;product=YoaK family protein;protein_id=WP_045621656.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 154126 155253 . - . ID=gene-VMS06_RS15495;Name=VMS06_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15495 NZ_JAVXZI010000013.1 Protein Homology CDS 154126 155253 . - 0 ID=cds-WP_323630677.1;Parent=gene-VMS06_RS15495;Dbxref=GenBank:WP_323630677.1;Name=WP_323630677.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219097.1;locus_tag=VMS06_RS15495;product=alpha/beta hydrolase;protein_id=WP_323630677.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 155368 156252 . + . ID=gene-VMS06_RS15500;Name=VMS06_RS15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15500 NZ_JAVXZI010000013.1 Protein Homology CDS 155368 156252 . + 0 ID=cds-WP_046620166.1;Parent=gene-VMS06_RS15500;Dbxref=GenBank:WP_046620166.1;Name=WP_046620166.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226526.1;locus_tag=VMS06_RS15500;product=LysR family transcriptional regulator;protein_id=WP_046620166.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 156339 156998 . + . ID=gene-VMS06_RS15505;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=VMS06_RS15505 NZ_JAVXZI010000013.1 Protein Homology CDS 156339 156998 . + 0 ID=cds-WP_063148134.1;Parent=gene-VMS06_RS15505;Dbxref=GenBank:WP_063148134.1;Name=WP_063148134.1;gbkey=CDS;gene=catA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570622.1;locus_tag=VMS06_RS15505;product=type A chloramphenicol O-acetyltransferase;protein_id=WP_063148134.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 157055 157366 . - . ID=gene-VMS06_RS15510;Name=VMS06_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15510 NZ_JAVXZI010000013.1 Protein Homology CDS 157055 157366 . - 0 ID=cds-WP_022647976.1;Parent=gene-VMS06_RS15510;Dbxref=GenBank:WP_022647976.1;Name=WP_022647976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857437.1;locus_tag=VMS06_RS15510;product=YebG family protein;protein_id=WP_022647976.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 157475 158089 . - . ID=gene-VMS06_RS15515;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=VMS06_RS15515 NZ_JAVXZI010000013.1 Protein Homology CDS 157475 158089 . - 0 ID=cds-WP_063148133.1;Parent=gene-VMS06_RS15515;Dbxref=GenBank:WP_063148133.1;Name=WP_063148133.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570619.1;locus_tag=VMS06_RS15515;product=Tat proofreading chaperone DmsD;protein_id=WP_063148133.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq gene 158135 158989 . - . ID=gene-VMS06_RS15520;Name=VMS06_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15520 NZ_JAVXZI010000013.1 Protein Homology CDS 158135 158989 . - 0 ID=cds-WP_063148132.1;Parent=gene-VMS06_RS15520;Dbxref=GenBank:WP_063148132.1;Name=WP_063148132.1;Ontology_term=GO:0009061,GO:0019645,GO:0009389,GO:0005886,GO:0009390;gbkey=CDS;go_component=plasma membrane|0005886||IEA,dimethyl sulfoxide reductase complex|0009390||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169878.1;locus_tag=VMS06_RS15520;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_063148132.1;transl_table=11 NZ_JAVXZI010000013.1 RefSeq pseudogene 158991 159071 . - . ID=gene-VMS06_RS15525;Name=VMS06_RS15525;end_range=159071,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS15525;partial=true;pseudo=true NZ_JAVXZI010000013.1 Protein Homology CDS 158991 159071 . - 0 ID=cds-VMS06_RS15525;Parent=gene-VMS06_RS15525;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=159071,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=VMS06_RS15525;partial=true;product=dimethyl sulfoxide reductase subunit B;pseudo=true;transl_table=11 ##sequence-region NZ_JAVXZI010000014.1 1 155753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000014.1 RefSeq region 1 155753 . + . ID=NZ_JAVXZI010000014.1:1..155753;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000014.1 RefSeq gene 276 983 . + . ID=gene-VMS06_RS15530;Name=VMS06_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15530 NZ_JAVXZI010000014.1 Protein Homology CDS 276 983 . + 0 ID=cds-WP_022649862.1;Parent=gene-VMS06_RS15530;Dbxref=GenBank:WP_022649862.1;Name=WP_022649862.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177536.1;locus_tag=VMS06_RS15530;product=FadR/GntR family transcriptional regulator;protein_id=WP_022649862.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 980 2413 . + . ID=gene-VMS06_RS15535;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=VMS06_RS15535 NZ_JAVXZI010000014.1 Protein Homology CDS 980 2413 . + 0 ID=cds-WP_022649863.1;Parent=gene-VMS06_RS15535;Dbxref=GenBank:WP_022649863.1;Name=WP_022649863.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000202073.1;locus_tag=VMS06_RS15535;product=multidrug transporter subunit MdtD;protein_id=WP_022649863.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 2379 3371 . - . ID=gene-VMS06_RS15540;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=VMS06_RS15540 NZ_JAVXZI010000014.1 Protein Homology CDS 2379 3371 . - 0 ID=cds-WP_072202236.1;Parent=gene-VMS06_RS15540;Dbxref=GenBank:WP_072202236.1;Name=WP_072202236.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462785.1;locus_tag=VMS06_RS15540;product=ribose operon transcriptional repressor RbsR;protein_id=WP_072202236.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 3375 4304 . - . ID=gene-VMS06_RS15545;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=VMS06_RS15545 NZ_JAVXZI010000014.1 Protein Homology CDS 3375 4304 . - 0 ID=cds-WP_022649865.1;Parent=gene-VMS06_RS15545;Dbxref=GenBank:WP_022649865.1;Name=WP_022649865.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882773.1;locus_tag=VMS06_RS15545;product=ribokinase;protein_id=WP_022649865.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 4413 5303 . - . ID=gene-VMS06_RS15550;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=VMS06_RS15550 NZ_JAVXZI010000014.1 Protein Homology CDS 4413 5303 . - 0 ID=cds-WP_003862397.1;Parent=gene-VMS06_RS15550;Dbxref=GenBank:WP_003862397.1;Name=WP_003862397.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312720.1;locus_tag=VMS06_RS15550;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_003862397.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 5331 6296 . - . ID=gene-VMS06_RS15555;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=VMS06_RS15555 NZ_JAVXZI010000014.1 Protein Homology CDS 5331 6296 . - 0 ID=cds-WP_022649866.1;Parent=gene-VMS06_RS15555;Dbxref=GenBank:WP_022649866.1;Name=WP_022649866.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=VMS06_RS15555;product=ribose ABC transporter permease;protein_id=WP_022649866.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 6301 7806 . - . ID=gene-VMS06_RS15560;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=VMS06_RS15560 NZ_JAVXZI010000014.1 Protein Homology CDS 6301 7806 . - 0 ID=cds-WP_022649867.1;Parent=gene-VMS06_RS15560;Dbxref=GenBank:WP_022649867.1;Name=WP_022649867.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418205.1;locus_tag=VMS06_RS15560;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_022649867.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 7814 8233 . - . ID=gene-VMS06_RS15565;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=VMS06_RS15565 NZ_JAVXZI010000014.1 Protein Homology CDS 7814 8233 . - 0 ID=cds-WP_063148212.1;Parent=gene-VMS06_RS15565;Dbxref=GenBank:WP_063148212.1;Name=WP_063148212.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709562.2;locus_tag=VMS06_RS15565;product=D-ribose pyranase;protein_id=WP_063148212.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 8431 10299 . - . ID=gene-VMS06_RS15570;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=VMS06_RS15570 NZ_JAVXZI010000014.1 Protein Homology CDS 8431 10299 . - 0 ID=cds-WP_006808744.1;Parent=gene-VMS06_RS15570;Dbxref=GenBank:WP_006808744.1;Name=WP_006808744.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=VMS06_RS15570;product=low affinity potassium transporter Kup;protein_id=WP_006808744.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 10522 12018 . + . ID=gene-VMS06_RS15575;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=VMS06_RS15575 NZ_JAVXZI010000014.1 Protein Homology CDS 10522 12018 . + 0 ID=cds-WP_022649869.1;Parent=gene-VMS06_RS15575;Dbxref=GenBank:WP_022649869.1;Name=WP_022649869.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462778.1;locus_tag=VMS06_RS15575;product=ATPase RavA;protein_id=WP_022649869.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 12012 13463 . + . ID=gene-VMS06_RS15580;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=VMS06_RS15580 NZ_JAVXZI010000014.1 Protein Homology CDS 12012 13463 . + 0 ID=cds-WP_063843889.1;Parent=gene-VMS06_RS15580;Dbxref=GenBank:WP_063843889.1;Name=WP_063843889.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312714.1;locus_tag=VMS06_RS15580;product=ATPase RavA stimulator ViaA;protein_id=WP_063843889.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 13464 14456 . - . ID=gene-VMS06_RS15585;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=VMS06_RS15585 NZ_JAVXZI010000014.1 Protein Homology CDS 13464 14456 . - 0 ID=cds-WP_063148210.1;Parent=gene-VMS06_RS15585;Dbxref=GenBank:WP_063148210.1;Name=WP_063148210.1;Ontology_term=GO:0070981,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224303.1;locus_tag=VMS06_RS15585;product=aspartate--ammonia ligase;protein_id=WP_063148210.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 14608 15066 . + . ID=gene-VMS06_RS15590;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=VMS06_RS15590 NZ_JAVXZI010000014.1 Protein Homology CDS 14608 15066 . + 0 ID=cds-WP_003862383.1;Parent=gene-VMS06_RS15590;Dbxref=GenBank:WP_003862383.1;Name=WP_003862383.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312712.1;locus_tag=VMS06_RS15590;product=transcriptional regulator AsnC;protein_id=WP_003862383.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 15157 15606 . + . ID=gene-VMS06_RS15595;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=VMS06_RS15595 NZ_JAVXZI010000014.1 Protein Homology CDS 15157 15606 . + 0 ID=cds-WP_032626719.1;Parent=gene-VMS06_RS15595;Dbxref=GenBank:WP_032626719.1;Name=WP_032626719.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862381.1;locus_tag=VMS06_RS15595;product=FMN-binding protein MioC;protein_id=WP_032626719.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 15981 17870 . + . ID=gene-VMS06_RS15600;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=VMS06_RS15600 NZ_JAVXZI010000014.1 Protein Homology CDS 15981 17870 . + 0 ID=cds-WP_022649871.1;Parent=gene-VMS06_RS15600;Dbxref=GenBank:WP_022649871.1;Name=WP_022649871.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=VMS06_RS15600;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_022649871.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 17978 18601 . + . ID=gene-VMS06_RS15605;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=VMS06_RS15605 NZ_JAVXZI010000014.1 Protein Homology CDS 17978 18601 . + 0 ID=cds-WP_022649872.1;Parent=gene-VMS06_RS15605;Dbxref=GenBank:WP_022649872.1;Name=WP_022649872.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882765.1;locus_tag=VMS06_RS15605;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_022649872.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 19218 19598 . + . ID=gene-VMS06_RS15610;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=VMS06_RS15610 NZ_JAVXZI010000014.1 Protein Homology CDS 19218 19598 . + 0 ID=cds-WP_003862375.1;Parent=gene-VMS06_RS15610;Dbxref=GenBank:WP_003862375.1;Name=WP_003862375.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229614.1;locus_tag=VMS06_RS15610;product=F0F1 ATP synthase subunit I;protein_id=WP_003862375.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 19607 20422 . + . ID=gene-VMS06_RS15615;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=VMS06_RS15615 NZ_JAVXZI010000014.1 Protein Homology CDS 19607 20422 . + 0 ID=cds-WP_022649873.1;Parent=gene-VMS06_RS15615;Dbxref=GenBank:WP_022649873.1;Name=WP_022649873.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=VMS06_RS15615;product=F0F1 ATP synthase subunit A;protein_id=WP_022649873.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 20472 20711 . + . ID=gene-VMS06_RS15620;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=VMS06_RS15620 NZ_JAVXZI010000014.1 Protein Homology CDS 20472 20711 . + 0 ID=cds-WP_000429386.1;Parent=gene-VMS06_RS15620;Dbxref=GenBank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=VMS06_RS15620;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 20760 21230 . + . ID=gene-VMS06_RS15625;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=VMS06_RS15625 NZ_JAVXZI010000014.1 Protein Homology CDS 20760 21230 . + 0 ID=cds-WP_003862370.1;Parent=gene-VMS06_RS15625;Dbxref=GenBank:WP_003862370.1;Name=WP_003862370.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=VMS06_RS15625;product=F0F1 ATP synthase subunit B;protein_id=WP_003862370.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 21245 21778 . + . ID=gene-VMS06_RS15630;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=VMS06_RS15630 NZ_JAVXZI010000014.1 Protein Homology CDS 21245 21778 . + 0 ID=cds-WP_003862369.1;Parent=gene-VMS06_RS15630;Dbxref=GenBank:WP_003862369.1;Name=WP_003862369.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=VMS06_RS15630;product=F0F1 ATP synthase subunit delta;protein_id=WP_003862369.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 21791 23332 . + . ID=gene-VMS06_RS15635;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=VMS06_RS15635 NZ_JAVXZI010000014.1 Protein Homology CDS 21791 23332 . + 0 ID=cds-WP_006808751.1;Parent=gene-VMS06_RS15635;Dbxref=GenBank:WP_006808751.1;Name=WP_006808751.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=VMS06_RS15635;product=F0F1 ATP synthase subunit alpha;protein_id=WP_006808751.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 23384 24247 . + . ID=gene-VMS06_RS15640;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=VMS06_RS15640 NZ_JAVXZI010000014.1 Protein Homology CDS 23384 24247 . + 0 ID=cds-WP_003862364.1;Parent=gene-VMS06_RS15640;Dbxref=GenBank:WP_003862364.1;Name=WP_003862364.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=VMS06_RS15640;product=F0F1 ATP synthase subunit gamma;protein_id=WP_003862364.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 24279 25661 . + . ID=gene-VMS06_RS15645;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=VMS06_RS15645 NZ_JAVXZI010000014.1 Protein Homology CDS 24279 25661 . + 0 ID=cds-WP_003862362.1;Parent=gene-VMS06_RS15645;Dbxref=GenBank:WP_003862362.1;Name=WP_003862362.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=VMS06_RS15645;product=F0F1 ATP synthase subunit beta;protein_id=WP_003862362.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 25682 26101 . + . ID=gene-VMS06_RS15650;Name=VMS06_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15650 NZ_JAVXZI010000014.1 Protein Homology CDS 25682 26101 . + 0 ID=cds-WP_006177560.1;Parent=gene-VMS06_RS15650;Dbxref=GenBank:WP_006177560.1;Name=WP_006177560.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=VMS06_RS15650;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_006177560.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 26240 27610 . + . ID=gene-VMS06_RS15655;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=VMS06_RS15655 NZ_JAVXZI010000014.1 Protein Homology CDS 26240 27610 . + 0 ID=cds-WP_022649874.1;Parent=gene-VMS06_RS15655;Dbxref=GenBank:WP_022649874.1;Name=WP_022649874.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312699.1;locus_tag=VMS06_RS15655;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_022649874.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 27857 29686 . + . ID=gene-VMS06_RS15660;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=VMS06_RS15660 NZ_JAVXZI010000014.1 Protein Homology CDS 27857 29686 . + 0 ID=cds-WP_022649875.1;Parent=gene-VMS06_RS15660;Dbxref=GenBank:WP_022649875.1;Name=WP_022649875.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=VMS06_RS15660;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_022649875.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 29964 31004 . + . ID=gene-VMS06_RS15665;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=VMS06_RS15665 NZ_JAVXZI010000014.1 Protein Homology CDS 29964 31004 . + 0 ID=cds-WP_022649876.1;Parent=gene-VMS06_RS15665;Dbxref=GenBank:WP_022649876.1;Name=WP_022649876.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462756.1;locus_tag=VMS06_RS15665;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_022649876.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 31132 32091 . + . ID=gene-VMS06_RS15670;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=VMS06_RS15670 NZ_JAVXZI010000014.1 Protein Homology CDS 31132 32091 . + 0 ID=cds-WP_022649877.1;Parent=gene-VMS06_RS15670;Dbxref=GenBank:WP_022649877.1;Name=WP_022649877.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=VMS06_RS15670;product=phosphate ABC transporter permease PstC;protein_id=WP_022649877.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 32091 32981 . + . ID=gene-VMS06_RS15675;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=VMS06_RS15675 NZ_JAVXZI010000014.1 Protein Homology CDS 32091 32981 . + 0 ID=cds-WP_022649878.1;Parent=gene-VMS06_RS15675;Dbxref=GenBank:WP_022649878.1;Name=WP_022649878.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462754.1;locus_tag=VMS06_RS15675;product=phosphate ABC transporter permease PstA;protein_id=WP_022649878.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 33029 33802 . + . ID=gene-VMS06_RS15680;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=VMS06_RS15680 NZ_JAVXZI010000014.1 Protein Homology CDS 33029 33802 . + 0 ID=cds-WP_003861154.1;Parent=gene-VMS06_RS15680;Dbxref=GenBank:WP_003861154.1;Name=WP_003861154.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=VMS06_RS15680;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_003861154.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 33829 34554 . + . ID=gene-VMS06_RS15685;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=VMS06_RS15685 NZ_JAVXZI010000014.1 Protein Homology CDS 33829 34554 . + 0 ID=cds-WP_003861153.1;Parent=gene-VMS06_RS15685;Dbxref=GenBank:WP_003861153.1;Name=WP_003861153.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462752.1;locus_tag=VMS06_RS15685;product=phosphate signaling complex protein PhoU;protein_id=WP_003861153.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 34640 35305 . - . ID=gene-VMS06_RS15690;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=VMS06_RS15690 NZ_JAVXZI010000014.1 Protein Homology CDS 34640 35305 . - 0 ID=cds-WP_022649879.1;Parent=gene-VMS06_RS15690;Dbxref=GenBank:WP_022649879.1;Name=WP_022649879.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861151.1;locus_tag=VMS06_RS15690;product=6-phosphogluconate phosphatase;protein_id=WP_022649879.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 35471 36808 . + . ID=gene-VMS06_RS15695;Name=adeP;gbkey=Gene;gene=adeP;gene_biotype=protein_coding;locus_tag=VMS06_RS15695 NZ_JAVXZI010000014.1 Protein Homology CDS 35471 36808 . + 0 ID=cds-WP_139152660.1;Parent=gene-VMS06_RS15695;Dbxref=GenBank:WP_139152660.1;Name=WP_139152660.1;gbkey=CDS;gene=adeP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312678.1;locus_tag=VMS06_RS15695;product=adenine permease AdeP;protein_id=WP_139152660.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 36900 37466 . - . ID=gene-VMS06_RS15700;Name=VMS06_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15700 NZ_JAVXZI010000014.1 Protein Homology CDS 36900 37466 . - 0 ID=cds-WP_022649881.1;Parent=gene-VMS06_RS15700;Dbxref=GenBank:WP_022649881.1;Name=WP_022649881.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229587.1;locus_tag=VMS06_RS15700;product=NADPH-dependent FMN reductase;protein_id=WP_022649881.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 37503 38249 . - . ID=gene-VMS06_RS15705;Name=VMS06_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15705 NZ_JAVXZI010000014.1 Protein Homology CDS 37503 38249 . - 0 ID=cds-WP_023298947.1;Parent=gene-VMS06_RS15705;Dbxref=GenBank:WP_023298947.1;Name=WP_023298947.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808759.1;locus_tag=VMS06_RS15705;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_023298947.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 38372 39343 . - . ID=gene-VMS06_RS15710;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=VMS06_RS15710 NZ_JAVXZI010000014.1 Protein Homology CDS 38372 39343 . - 0 ID=cds-WP_022649883.1;Parent=gene-VMS06_RS15710;Dbxref=GenBank:WP_022649883.1;Name=WP_022649883.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014881898.1;locus_tag=VMS06_RS15710;product=HTH-type transcriptional regulator YidZ;protein_id=WP_022649883.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 39312 40487 . - . ID=gene-VMS06_RS15715;Name=VMS06_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15715 NZ_JAVXZI010000014.1 Protein Homology CDS 39312 40487 . - 0 ID=cds-WP_032622027.1;Parent=gene-VMS06_RS15715;Dbxref=GenBank:WP_032622027.1;Name=WP_032622027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500175.1;locus_tag=VMS06_RS15715;product=MFS transporter;protein_id=WP_032622027.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 40599 41963 . - . ID=gene-VMS06_RS15720;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=VMS06_RS15720 NZ_JAVXZI010000014.1 Protein Homology CDS 40599 41963 . - 0 ID=cds-WP_063843888.1;Parent=gene-VMS06_RS15720;Dbxref=GenBank:WP_063843888.1;Name=WP_063843888.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709494.1;locus_tag=VMS06_RS15720;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_063843888.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 42036 43679 . - . ID=gene-VMS06_RS15725;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=VMS06_RS15725 NZ_JAVXZI010000014.1 Protein Homology CDS 42036 43679 . - 0 ID=cds-WP_023298949.1;Parent=gene-VMS06_RS15725;Dbxref=GenBank:WP_023298949.1;Name=WP_023298949.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=VMS06_RS15725;product=membrane protein insertase YidC;protein_id=WP_023298949.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 43682 43939 . - . ID=gene-VMS06_RS15730;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=VMS06_RS15730 NZ_JAVXZI010000014.1 Protein Homology CDS 43682 43939 . - 0 ID=cds-WP_001307474.1;Parent=gene-VMS06_RS15730;Dbxref=GenBank:WP_001307474.1;Name=WP_001307474.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=VMS06_RS15730;product=membrane protein insertion efficiency factor YidD;protein_id=WP_001307474.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 43903 44262 . - . ID=gene-VMS06_RS15735;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=VMS06_RS15735 NZ_JAVXZI010000014.1 Protein Homology CDS 43903 44262 . - 0 ID=cds-WP_006808764.1;Parent=gene-VMS06_RS15735;Dbxref=GenBank:WP_006808764.1;Name=WP_006808764.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=VMS06_RS15735;product=ribonuclease P protein component;protein_id=WP_006808764.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 44279 44419 . - . ID=gene-VMS06_RS15740;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=VMS06_RS15740 NZ_JAVXZI010000014.1 Protein Homology CDS 44279 44419 . - 0 ID=cds-WP_000831330.1;Parent=gene-VMS06_RS15740;Dbxref=GenBank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=VMS06_RS15740;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 45058 46452 . + . ID=gene-VMS06_RS15745;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=VMS06_RS15745 NZ_JAVXZI010000014.1 Protein Homology CDS 45058 46452 . + 0 ID=cds-WP_003861124.1;Parent=gene-VMS06_RS15745;Dbxref=GenBank:WP_003861124.1;Name=WP_003861124.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462738.1;locus_tag=VMS06_RS15745;product=chromosomal replication initiator protein DnaA;protein_id=WP_003861124.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 46457 47557 . + . ID=gene-VMS06_RS15750;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=VMS06_RS15750 NZ_JAVXZI010000014.1 Protein Homology CDS 46457 47557 . + 0 ID=cds-WP_003861122.1;Parent=gene-VMS06_RS15750;Dbxref=GenBank:WP_003861122.1;Name=WP_003861122.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=VMS06_RS15750;product=DNA polymerase III subunit beta;protein_id=WP_003861122.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 47557 48630 . + . ID=gene-VMS06_RS15755;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=VMS06_RS15755 NZ_JAVXZI010000014.1 Protein Homology CDS 47557 48630 . + 0 ID=cds-WP_022646527.1;Parent=gene-VMS06_RS15755;Dbxref=GenBank:WP_022646527.1;Name=WP_022646527.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=VMS06_RS15755;product=DNA replication/repair protein RecF;protein_id=WP_022646527.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 48659 51070 . + . ID=gene-VMS06_RS15760;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=VMS06_RS15760 NZ_JAVXZI010000014.1 Protein Homology CDS 48659 51070 . + 0 ID=cds-WP_023298951.1;Parent=gene-VMS06_RS15760;Dbxref=GenBank:WP_023298951.1;Name=WP_023298951.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=VMS06_RS15760;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_023298951.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 51299 52003 . + . ID=gene-VMS06_RS15765;Name=VMS06_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15765 NZ_JAVXZI010000014.1 Protein Homology CDS 51299 52003 . + 0 ID=cds-WP_022646529.1;Parent=gene-VMS06_RS15765;Dbxref=GenBank:WP_022646529.1;Name=WP_022646529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157456.1;locus_tag=VMS06_RS15765;product=hypothetical protein;protein_id=WP_022646529.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 52006 52407 . + . ID=gene-VMS06_RS15770;Name=VMS06_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15770 NZ_JAVXZI010000014.1 GeneMarkS-2+ CDS 52006 52407 . + 0 ID=cds-WP_048966201.1;Parent=gene-VMS06_RS15770;Dbxref=GenBank:WP_048966201.1;Name=WP_048966201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS15770;product=hypothetical protein;protein_id=WP_048966201.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 52404 53342 . - . ID=gene-VMS06_RS15775;Name=VMS06_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15775 NZ_JAVXZI010000014.1 Protein Homology CDS 52404 53342 . - 0 ID=cds-WP_063148208.1;Parent=gene-VMS06_RS15775;Dbxref=GenBank:WP_063148208.1;Name=WP_063148208.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830031.1;locus_tag=VMS06_RS15775;product=LysR family transcriptional regulator;protein_id=WP_063148208.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 53453 54478 . + . ID=gene-VMS06_RS15780;Name=VMS06_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15780 NZ_JAVXZI010000014.1 Protein Homology CDS 53453 54478 . + 0 ID=cds-WP_045620988.1;Parent=gene-VMS06_RS15780;Dbxref=GenBank:WP_045620988.1;Name=WP_045620988.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855699.1;locus_tag=VMS06_RS15780;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_045620988.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 54592 55404 . + . ID=gene-VMS06_RS15785;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=VMS06_RS15785 NZ_JAVXZI010000014.1 Protein Homology CDS 54592 55404 . + 0 ID=cds-WP_063148207.1;Parent=gene-VMS06_RS15785;Dbxref=GenBank:WP_063148207.1;Name=WP_063148207.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418152.1;locus_tag=VMS06_RS15785;product=sugar-phosphatase;protein_id=WP_063148207.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 55631 56320 . + . ID=gene-VMS06_RS15790;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=VMS06_RS15790 NZ_JAVXZI010000014.1 Protein Homology CDS 55631 56320 . + 0 ID=cds-WP_003861109.1;Parent=gene-VMS06_RS15790;Dbxref=GenBank:WP_003861109.1;Name=WP_003861109.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709505.1;locus_tag=VMS06_RS15790;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_003861109.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 56317 57195 . + . ID=gene-VMS06_RS15795;Name=VMS06_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15795 NZ_JAVXZI010000014.1 Protein Homology CDS 56317 57195 . + 0 ID=cds-WP_063148206.1;Parent=gene-VMS06_RS15795;Dbxref=GenBank:WP_063148206.1;Name=WP_063148206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229570.1;locus_tag=VMS06_RS15795;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_063148206.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 57179 57796 . + . ID=gene-VMS06_RS15800;Name=VMS06_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15800 NZ_JAVXZI010000014.1 Protein Homology CDS 57179 57796 . + 0 ID=cds-WP_063148205.1;Parent=gene-VMS06_RS15800;Dbxref=GenBank:WP_063148205.1;Name=WP_063148205.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026238.1;locus_tag=VMS06_RS15800;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_063148205.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 57793 58941 . + . ID=gene-VMS06_RS15805;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=VMS06_RS15805 NZ_JAVXZI010000014.1 Protein Homology CDS 57793 58941 . + 0 ID=cds-WP_017694024.1;Parent=gene-VMS06_RS15805;Dbxref=GenBank:WP_017694024.1;Name=WP_017694024.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=VMS06_RS15805;product=galactonate dehydratase;protein_id=WP_017694024.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 59121 60458 . + . ID=gene-VMS06_RS15810;Name=VMS06_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15810 NZ_JAVXZI010000014.1 Protein Homology CDS 59121 60458 . + 0 ID=cds-WP_161177384.1;Parent=gene-VMS06_RS15810;Dbxref=GenBank:WP_161177384.1;Name=WP_161177384.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709507.1;locus_tag=VMS06_RS15810;product=MFS transporter;protein_id=WP_161177384.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 60510 61739 . + . ID=gene-VMS06_RS15815;Name=VMS06_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15815 NZ_JAVXZI010000014.1 Protein Homology CDS 60510 61739 . + 0 ID=cds-WP_074136386.1;Parent=gene-VMS06_RS15815;Dbxref=GenBank:WP_074136386.1;Name=WP_074136386.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861097.1;locus_tag=VMS06_RS15815;product=YidR family protein;protein_id=WP_074136386.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 61736 62068 . - . ID=gene-VMS06_RS15820;Name=VMS06_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15820 NZ_JAVXZI010000014.1 Protein Homology CDS 61736 62068 . - 0 ID=cds-WP_032622035.1;Parent=gene-VMS06_RS15820;Dbxref=GenBank:WP_032622035.1;Name=WP_032622035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383693.1;locus_tag=VMS06_RS15820;product=YceK/YidQ family lipoprotein;protein_id=WP_032622035.1;transl_table=11 NZ_JAVXZI010000014.1 cmsearch sequence_feature 62316 62390 . + . ID=id-NZ_JAVXZI010000014.1:62316..62390;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JAVXZI010000014.1 RefSeq gene 62384 62794 . + . ID=gene-VMS06_RS15825;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=VMS06_RS15825 NZ_JAVXZI010000014.1 Protein Homology CDS 62384 62794 . + 0 ID=cds-WP_003861094.1;Parent=gene-VMS06_RS15825;Dbxref=GenBank:WP_003861094.1;Name=WP_003861094.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpA;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=VMS06_RS15825;product=small heat shock chaperone IbpA;protein_id=WP_003861094.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 62931 63359 . + . ID=gene-VMS06_RS15830;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=VMS06_RS15830 NZ_JAVXZI010000014.1 Protein Homology CDS 62931 63359 . + 0 ID=cds-WP_022646539.1;Parent=gene-VMS06_RS15830;Dbxref=GenBank:WP_022646539.1;Name=WP_022646539.1;Ontology_term=GO:0006950,GO:0051082;gbkey=CDS;gene=ibpB;go_function=unfolded protein binding|0051082||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462708.3;locus_tag=VMS06_RS15830;product=small heat shock chaperone IbpB;protein_id=WP_022646539.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 63532 65193 . + . ID=gene-VMS06_RS15835;Name=VMS06_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15835 NZ_JAVXZI010000014.1 Protein Homology CDS 63532 65193 . + 0 ID=cds-WP_022646540.1;Parent=gene-VMS06_RS15835;Dbxref=GenBank:WP_022646540.1;Name=WP_022646540.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462707.1;locus_tag=VMS06_RS15835;product=putative transporter;protein_id=WP_022646540.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 65173 65907 . - . ID=gene-VMS06_RS15840;Name=VMS06_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15840 NZ_JAVXZI010000014.1 Protein Homology CDS 65173 65907 . - 0 ID=cds-WP_063843887.1;Parent=gene-VMS06_RS15840;Dbxref=GenBank:WP_063843887.1;Name=WP_063843887.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861087.1;locus_tag=VMS06_RS15840;product=GntR family transcriptional regulator;protein_id=WP_063843887.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 66129 67751 . + . ID=gene-VMS06_RS15845;Name=VMS06_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15845 NZ_JAVXZI010000014.1 Protein Homology CDS 66129 67751 . + 0 ID=cds-WP_022646542.1;Parent=gene-VMS06_RS15845;Dbxref=GenBank:WP_022646542.1;Name=WP_022646542.1;Ontology_term=GO:0009401,GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229559.1;locus_tag=VMS06_RS15845;product=alpha-glucoside-specific PTS transporter subunit IIBC;protein_id=WP_022646542.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 67748 69070 . + . ID=gene-VMS06_RS15850;Name=VMS06_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15850 NZ_JAVXZI010000014.1 Protein Homology CDS 67748 69070 . + 0 ID=cds-WP_038414984.1;Parent=gene-VMS06_RS15850;Dbxref=GenBank:WP_038414984.1;Name=WP_038414984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229558.1;locus_tag=VMS06_RS15850;product=6-phospho-alpha-glucosidase;protein_id=WP_038414984.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 69163 69510 . + . ID=gene-VMS06_RS15855;Name=VMS06_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15855 NZ_JAVXZI010000014.1 Protein Homology CDS 69163 69510 . + 0 ID=cds-WP_063148202.1;Parent=gene-VMS06_RS15855;Dbxref=GenBank:WP_063148202.1;Name=WP_063148202.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462706.1;locus_tag=VMS06_RS15855;product=YidH family protein;protein_id=WP_063148202.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 69500 69847 . + . ID=gene-VMS06_RS15860;Name=VMS06_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15860 NZ_JAVXZI010000014.1 Protein Homology CDS 69500 69847 . + 0 ID=cds-WP_022646545.1;Parent=gene-VMS06_RS15860;Dbxref=GenBank:WP_022646545.1;Name=WP_022646545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570122.1;locus_tag=VMS06_RS15860;product=DUF202 domain-containing protein;protein_id=WP_022646545.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 69880 71166 . - . ID=gene-VMS06_RS15865;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=VMS06_RS15865 NZ_JAVXZI010000014.1 Protein Homology CDS 69880 71166 . - 0 ID=cds-WP_063148201.1;Parent=gene-VMS06_RS15865;Dbxref=GenBank:WP_063148201.1;Name=WP_063148201.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;gene=dsdA;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808793.1;locus_tag=VMS06_RS15865;product=D-serine ammonia-lyase;protein_id=WP_063148201.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq pseudogene 71264 72349 . + . ID=gene-VMS06_RS15870;Name=VMS06_RS15870;end_range=72349,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS15870;partial=true;pseudo=true NZ_JAVXZI010000014.1 Protein Homology CDS 71264 72349 . + 0 ID=cds-VMS06_RS15870;Parent=gene-VMS06_RS15870;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0000272,GO:0004553;end_range=72349,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014167981.1;locus_tag=VMS06_RS15870;partial=true;product=cellulase family glycosylhydrolase;pseudo=true;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 72255 73439 . - . ID=gene-VMS06_RS15875;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=VMS06_RS15875 NZ_JAVXZI010000014.1 Protein Homology CDS 72255 73439 . - 0 ID=cds-WP_023298963.1;Parent=gene-VMS06_RS15875;Dbxref=GenBank:WP_023298963.1;Name=WP_023298963.1;Ontology_term=GO:0042908,GO:0042910,GO:0016020;gbkey=CDS;gene=emrD;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462699.1;locus_tag=VMS06_RS15875;product=multidrug efflux MFS transporter EmrD;protein_id=WP_023298963.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq pseudogene 73615 74032 . - . ID=gene-VMS06_RS15880;Name=VMS06_RS15880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS15880;pseudo=true NZ_JAVXZI010000014.1 Protein Homology CDS 73615 74032 . - 0 ID=cds-VMS06_RS15880;Parent=gene-VMS06_RS15880;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229549.1;locus_tag=VMS06_RS15880;product=EamA family transporter;pseudo=true;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 74095 74541 . - . ID=gene-VMS06_RS15885;Name=VMS06_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15885 NZ_JAVXZI010000014.1 Protein Homology CDS 74095 74541 . - 0 ID=cds-WP_023298965.1;Parent=gene-VMS06_RS15885;Dbxref=GenBank:WP_023298965.1;Name=WP_023298965.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202251.1;locus_tag=VMS06_RS15885;product=GNAT family N-acetyltransferase;protein_id=WP_023298965.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 74606 74695 . - . ID=gene-VMS06_RS15890;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=VMS06_RS15890 NZ_JAVXZI010000014.1 Protein Homology CDS 74606 74695 . - 0 ID=cds-WP_022646551.1;Parent=gene-VMS06_RS15890;Dbxref=GenBank:WP_022646551.1;Name=WP_022646551.1;Ontology_term=GO:0009432,GO:0022611,GO:0015075,GO:0005886;gbkey=CDS;gene=tisB;go_component=plasma membrane|0005886||IEA;go_function=monoatomic ion transmembrane transporter activity|0015075||IEA;go_process=SOS response|0009432||IEA,dormancy process|0022611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453107.1;locus_tag=VMS06_RS15890;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_022646551.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 75182 75496 . + . ID=gene-VMS06_RS15895;Name=VMS06_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15895 NZ_JAVXZI010000014.1 Protein Homology CDS 75182 75496 . + 0 ID=cds-WP_022646552.1;Parent=gene-VMS06_RS15895;Dbxref=GenBank:WP_022646552.1;Name=WP_022646552.1;Ontology_term=GO:0003723,GO:0004519,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA binding|0003723||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014881928.1;locus_tag=VMS06_RS15895;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_022646552.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 75493 75912 . + . ID=gene-VMS06_RS15900;Name=VMS06_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15900 NZ_JAVXZI010000014.1 Protein Homology CDS 75493 75912 . + 0 ID=cds-WP_023305145.1;Parent=gene-VMS06_RS15900;Dbxref=GenBank:WP_023305145.1;Name=WP_023305145.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808800.1;locus_tag=VMS06_RS15900;product=helix-turn-helix domain-containing protein;protein_id=WP_023305145.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 76059 76157 . + . ID=gene-VMS06_RS15905;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=VMS06_RS15905 NZ_JAVXZI010000014.1 Protein Homology CDS 76059 76157 . + 0 ID=cds-WP_057979964.1;Parent=gene-VMS06_RS15905;Dbxref=GenBank:WP_057979964.1;Name=WP_057979964.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001337261.1;locus_tag=VMS06_RS15905;product=ilvB operon leader peptide IvbL;protein_id=WP_057979964.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 76264 77952 . + . ID=gene-VMS06_RS15910;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=VMS06_RS15910 NZ_JAVXZI010000014.1 Protein Homology CDS 76264 77952 . + 0 ID=cds-WP_063148199.1;Parent=gene-VMS06_RS15910;Dbxref=GenBank:WP_063148199.1;Name=WP_063148199.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312639.1;locus_tag=VMS06_RS15910;product=acetolactate synthase large subunit;protein_id=WP_063148199.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 77956 78243 . + . ID=gene-VMS06_RS15915;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=VMS06_RS15915 NZ_JAVXZI010000014.1 Protein Homology CDS 77956 78243 . + 0 ID=cds-WP_008500144.1;Parent=gene-VMS06_RS15915;Dbxref=GenBank:WP_008500144.1;Name=WP_008500144.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229544.1;locus_tag=VMS06_RS15915;product=acetolactate synthase small subunit;protein_id=WP_008500144.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 78369 78962 . + . ID=gene-VMS06_RS15920;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=VMS06_RS15920 NZ_JAVXZI010000014.1 Protein Homology CDS 78369 78962 . + 0 ID=cds-WP_022646555.1;Parent=gene-VMS06_RS15920;Dbxref=GenBank:WP_022646555.1;Name=WP_022646555.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229543.1;locus_tag=VMS06_RS15920;product=response regulator transcription factor UhpA;protein_id=WP_022646555.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 78959 80464 . + . ID=gene-VMS06_RS15925;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=VMS06_RS15925 NZ_JAVXZI010000014.1 Protein Homology CDS 78959 80464 . + 0 ID=cds-WP_048966212.1;Parent=gene-VMS06_RS15925;Dbxref=GenBank:WP_048966212.1;Name=WP_048966212.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694010.1;locus_tag=VMS06_RS15925;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_048966212.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 80457 81767 . + . ID=gene-VMS06_RS15930;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=VMS06_RS15930 NZ_JAVXZI010000014.1 Protein Homology CDS 80457 81767 . + 0 ID=cds-WP_063148198.1;Parent=gene-VMS06_RS15930;Dbxref=GenBank:WP_063148198.1;Name=WP_063148198.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177623.1;locus_tag=VMS06_RS15930;product=MFS transporter;protein_id=WP_063148198.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 81900 83291 . + . ID=gene-VMS06_RS15935;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=VMS06_RS15935 NZ_JAVXZI010000014.1 Protein Homology CDS 81900 83291 . + 0 ID=cds-WP_023298970.1;Parent=gene-VMS06_RS15935;Dbxref=GenBank:WP_023298970.1;Name=WP_023298970.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462686.1;locus_tag=VMS06_RS15935;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_023298970.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 83453 84457 . + . ID=gene-VMS06_RS15940;Name=VMS06_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15940 NZ_JAVXZI010000014.1 Protein Homology CDS 83453 84457 . + 0 ID=cds-WP_058677100.1;Parent=gene-VMS06_RS15940;Dbxref=GenBank:WP_058677100.1;Name=WP_058677100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094813.1;locus_tag=VMS06_RS15940;product=alpha/beta fold hydrolase;protein_id=WP_058677100.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 84609 85061 . + . ID=gene-VMS06_RS15945;Name=VMS06_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15945 NZ_JAVXZI010000014.1 Protein Homology CDS 84609 85061 . + 0 ID=cds-WP_014830062.1;Parent=gene-VMS06_RS15945;Dbxref=GenBank:WP_014830062.1;Name=WP_014830062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229539.1;locus_tag=VMS06_RS15945;product=DUF1198 domain-containing protein;protein_id=WP_014830062.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 85058 85978 . - . ID=gene-VMS06_RS15950;Name=VMS06_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15950 NZ_JAVXZI010000014.1 Protein Homology CDS 85058 85978 . - 0 ID=cds-WP_045308255.1;Parent=gene-VMS06_RS15950;Dbxref=GenBank:WP_045308255.1;Name=WP_045308255.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014167993.1;locus_tag=VMS06_RS15950;product=LysR family transcriptional regulator;protein_id=WP_045308255.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 86165 86776 . + . ID=gene-VMS06_RS15955;Name=VMS06_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15955 NZ_JAVXZI010000014.1 Protein Homology CDS 86165 86776 . + 0 ID=cds-WP_045308254.1;Parent=gene-VMS06_RS15955;Dbxref=GenBank:WP_045308254.1;Name=WP_045308254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442126.1;locus_tag=VMS06_RS15955;product=hypothetical protein;protein_id=WP_045308254.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 86787 87563 . + . ID=gene-VMS06_RS15960;Name=VMS06_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15960 NZ_JAVXZI010000014.1 Protein Homology CDS 86787 87563 . + 0 ID=cds-WP_045308253.1;Parent=gene-VMS06_RS15960;Dbxref=GenBank:WP_045308253.1;Name=WP_045308253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442125.1;locus_tag=VMS06_RS15960;product=AfsA-related hotdog domain-containing protein;protein_id=WP_045308253.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 87556 88389 . + . ID=gene-VMS06_RS15965;Name=VMS06_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15965 NZ_JAVXZI010000014.1 Protein Homology CDS 87556 88389 . + 0 ID=cds-WP_045308252.1;Parent=gene-VMS06_RS15965;Dbxref=GenBank:WP_045308252.1;Name=WP_045308252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019453202.1;locus_tag=VMS06_RS15965;product=hypothetical protein;protein_id=WP_045308252.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 88397 88621 . + . ID=gene-VMS06_RS15970;Name=VMS06_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15970 NZ_JAVXZI010000014.1 Protein Homology CDS 88397 88621 . + 0 ID=cds-WP_045308251.1;Parent=gene-VMS06_RS15970;Dbxref=GenBank:WP_045308251.1;Name=WP_045308251.1;Ontology_term=GO:0008152,GO:0016862;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029782.1;locus_tag=VMS06_RS15970;product=2-hydroxymuconate tautomerase;protein_id=WP_045308251.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 88625 89275 . + . ID=gene-VMS06_RS15975;Name=VMS06_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15975 NZ_JAVXZI010000014.1 Protein Homology CDS 88625 89275 . + 0 ID=cds-WP_063148197.1;Parent=gene-VMS06_RS15975;Dbxref=GenBank:WP_063148197.1;Name=WP_063148197.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029784.1;locus_tag=VMS06_RS15975;product=HAD family hydrolase;protein_id=WP_063148197.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 89297 90517 . + . ID=gene-VMS06_RS15980;Name=VMS06_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15980 NZ_JAVXZI010000014.1 Protein Homology CDS 89297 90517 . + 0 ID=cds-WP_063148196.1;Parent=gene-VMS06_RS15980;Dbxref=GenBank:WP_063148196.1;Name=WP_063148196.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808812.1;locus_tag=VMS06_RS15980;product=MFS transporter;protein_id=WP_063148196.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 90504 90917 . + . ID=gene-VMS06_RS15985;Name=VMS06_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15985 NZ_JAVXZI010000014.1 Protein Homology CDS 90504 90917 . + 0 ID=cds-WP_028014973.1;Parent=gene-VMS06_RS15985;Dbxref=GenBank:WP_028014973.1;Name=WP_028014973.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014167999.1;locus_tag=VMS06_RS15985;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_028014973.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 90914 92089 . + . ID=gene-VMS06_RS15990;Name=VMS06_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15990 NZ_JAVXZI010000014.1 Protein Homology CDS 90914 92089 . + 0 ID=cds-WP_045308247.1;Parent=gene-VMS06_RS15990;Dbxref=GenBank:WP_045308247.1;Name=WP_045308247.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178345.1;locus_tag=VMS06_RS15990;product=acetyl-CoA C-acetyltransferase;protein_id=WP_045308247.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 92152 93150 . - . ID=gene-VMS06_RS15995;Name=VMS06_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS15995 NZ_JAVXZI010000014.1 Protein Homology CDS 92152 93150 . - 0 ID=cds-WP_045308246.1;Parent=gene-VMS06_RS15995;Dbxref=GenBank:WP_045308246.1;Name=WP_045308246.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000857836.1;locus_tag=VMS06_RS15995;product=aldo/keto reductase;protein_id=WP_045308246.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 93357 94547 . + . ID=gene-VMS06_RS16000;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=VMS06_RS16000 NZ_JAVXZI010000014.1 Protein Homology CDS 93357 94547 . + 0 ID=cds-WP_023298972.1;Parent=gene-VMS06_RS16000;Dbxref=GenBank:WP_023298972.1;Name=WP_023298972.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134752.1;locus_tag=VMS06_RS16000;product=purine ribonucleoside efflux pump NepI;protein_id=WP_023298972.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 94660 95565 . - . ID=gene-VMS06_RS16005;Name=VMS06_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16005 NZ_JAVXZI010000014.1 Protein Homology CDS 94660 95565 . - 0 ID=cds-WP_023298973.1;Parent=gene-VMS06_RS16005;Dbxref=GenBank:WP_023298973.1;Name=WP_023298973.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014068294.1;locus_tag=VMS06_RS16005;product=EamA family transporter;protein_id=WP_023298973.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 95713 97092 . - . ID=gene-VMS06_RS16010;Name=VMS06_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16010 NZ_JAVXZI010000014.1 Protein Homology CDS 95713 97092 . - 0 ID=cds-WP_022646562.1;Parent=gene-VMS06_RS16010;Dbxref=GenBank:WP_022646562.1;Name=WP_022646562.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007897766.1;locus_tag=VMS06_RS16010;product=carbohydrate porin;protein_id=WP_022646562.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 97231 97533 . - . ID=gene-VMS06_RS16015;Name=VMS06_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16015 NZ_JAVXZI010000014.1 Protein Homology CDS 97231 97533 . - 0 ID=cds-WP_014168006.1;Parent=gene-VMS06_RS16015;Dbxref=GenBank:WP_014168006.1;Name=WP_014168006.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016740,GO:0016773,GO:0046872,GO:0051119,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=transferase activity|0016740||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,metal ion binding|0046872||IEA,sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500136.1;locus_tag=VMS06_RS16015;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_014168006.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 97539 98915 . - . ID=gene-VMS06_RS16020;Name=VMS06_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16020 NZ_JAVXZI010000014.1 Protein Homology CDS 97539 98915 . - 0 ID=cds-WP_063148195.1;Parent=gene-VMS06_RS16020;Dbxref=GenBank:WP_063148195.1;Name=WP_063148195.1;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694005.1;locus_tag=VMS06_RS16020;product=glycoside hydrolase family 1 protein;protein_id=WP_063148195.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 98933 100258 . - . ID=gene-VMS06_RS16025;Name=VMS06_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16025 NZ_JAVXZI010000014.1 Protein Homology CDS 98933 100258 . - 0 ID=cds-WP_022646565.1;Parent=gene-VMS06_RS16025;Dbxref=GenBank:WP_022646565.1;Name=WP_022646565.1;Ontology_term=GO:0009401,GO:0016773,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014068298.1;locus_tag=VMS06_RS16025;product=PTS sugar transporter subunit IIC;protein_id=WP_022646565.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 100270 100584 . - . ID=gene-VMS06_RS16030;Name=VMS06_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16030 NZ_JAVXZI010000014.1 Protein Homology CDS 100270 100584 . - 0 ID=cds-WP_003861034.1;Parent=gene-VMS06_RS16030;Dbxref=GenBank:WP_003861034.1;Name=WP_003861034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861034.1;locus_tag=VMS06_RS16030;product=PTS sugar transporter subunit IIB;protein_id=WP_003861034.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 100878 101828 . + . ID=gene-VMS06_RS16035;Name=VMS06_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16035 NZ_JAVXZI010000014.1 Protein Homology CDS 100878 101828 . + 0 ID=cds-WP_022646566.1;Parent=gene-VMS06_RS16035;Dbxref=GenBank:WP_022646566.1;Name=WP_022646566.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861033.1;locus_tag=VMS06_RS16035;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_022646566.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 101879 102175 . - . ID=gene-VMS06_RS16040;Name=VMS06_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16040 NZ_JAVXZI010000014.1 Protein Homology CDS 101879 102175 . - 0 ID=cds-WP_022646567.1;Parent=gene-VMS06_RS16040;Dbxref=GenBank:WP_022646567.1;Name=WP_022646567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570101.1;locus_tag=VMS06_RS16040;product=YicS family protein;protein_id=WP_022646567.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 102296 103660 . - . ID=gene-VMS06_RS16045;Name=VMS06_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16045 NZ_JAVXZI010000014.1 Protein Homology CDS 102296 103660 . - 0 ID=cds-WP_023298975.1;Parent=gene-VMS06_RS16045;Dbxref=GenBank:WP_023298975.1;Name=WP_023298975.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882718.1;locus_tag=VMS06_RS16045;product=efflux transporter outer membrane subunit;protein_id=WP_023298975.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 103660 106770 . - . ID=gene-VMS06_RS16050;Name=VMS06_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16050 NZ_JAVXZI010000014.1 Protein Homology CDS 103660 106770 . - 0 ID=cds-WP_063148194.1;Parent=gene-VMS06_RS16050;Dbxref=GenBank:WP_063148194.1;Name=WP_063148194.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830074.1;locus_tag=VMS06_RS16050;product=efflux RND transporter permease subunit;protein_id=WP_063148194.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 106770 107891 . - . ID=gene-VMS06_RS16055;Name=VMS06_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16055 NZ_JAVXZI010000014.1 Protein Homology CDS 106770 107891 . - 0 ID=cds-WP_038414997.1;Parent=gene-VMS06_RS16055;Dbxref=GenBank:WP_038414997.1;Name=WP_038414997.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882716.1;locus_tag=VMS06_RS16055;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_038414997.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 108038 108607 . - . ID=gene-VMS06_RS16060;Name=VMS06_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16060 NZ_JAVXZI010000014.1 Protein Homology CDS 108038 108607 . - 0 ID=cds-WP_058677105.1;Parent=gene-VMS06_RS16060;Dbxref=GenBank:WP_058677105.1;Name=WP_058677105.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000104919.1;locus_tag=VMS06_RS16060;product=TetR/AcrR family transcriptional regulator;protein_id=WP_058677105.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 108793 109212 . + . ID=gene-VMS06_RS16065;Name=VMS06_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16065 NZ_JAVXZI010000014.1 Protein Homology CDS 108793 109212 . + 0 ID=cds-WP_022646571.1;Parent=gene-VMS06_RS16065;Dbxref=GenBank:WP_022646571.1;Name=WP_022646571.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861020.1;locus_tag=VMS06_RS16065;product=GNAT family N-acetyltransferase;protein_id=WP_022646571.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 109209 109856 . - . ID=gene-VMS06_RS16070;Name=VMS06_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16070 NZ_JAVXZI010000014.1 Protein Homology CDS 109209 109856 . - 0 ID=cds-WP_032622106.1;Parent=gene-VMS06_RS16070;Dbxref=GenBank:WP_032622106.1;Name=WP_032622106.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812486.1;locus_tag=VMS06_RS16070;product=TetR/AcrR family transcriptional regulator;protein_id=WP_032622106.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 109935 111434 . + . ID=gene-VMS06_RS16075;Name=VMS06_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16075 NZ_JAVXZI010000014.1 Protein Homology CDS 109935 111434 . + 0 ID=cds-WP_032670895.1;Parent=gene-VMS06_RS16075;Dbxref=GenBank:WP_032670895.1;Name=WP_032670895.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570095.1;locus_tag=VMS06_RS16075;product=MDR family MFS transporter;protein_id=WP_032670895.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 111664 112464 . + . ID=gene-VMS06_RS16080;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=VMS06_RS16080 NZ_JAVXZI010000014.1 Protein Homology CDS 111664 112464 . + 0 ID=cds-WP_058677108.1;Parent=gene-VMS06_RS16080;Dbxref=GenBank:WP_058677108.1;Name=WP_058677108.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830078.1;locus_tag=VMS06_RS16080;product=lipoprotein NlpA;protein_id=WP_058677108.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 112483 113163 . - . ID=gene-VMS06_RS16085;Name=VMS06_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16085 NZ_JAVXZI010000014.1 Protein Homology CDS 112483 113163 . - 0 ID=cds-WP_063148192.1;Parent=gene-VMS06_RS16085;Dbxref=GenBank:WP_063148192.1;Name=WP_063148192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693995.1;locus_tag=VMS06_RS16085;product=EAL domain-containing protein;protein_id=WP_063148192.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 113240 113860 . - . ID=gene-VMS06_RS16090;Name=VMS06_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16090 NZ_JAVXZI010000014.1 Protein Homology CDS 113240 113860 . - 0 ID=cds-WP_015570093.1;Parent=gene-VMS06_RS16090;Dbxref=GenBank:WP_015570093.1;Name=WP_015570093.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812480.1;locus_tag=VMS06_RS16090;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_015570093.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 114430 115065 . + . ID=gene-VMS06_RS16095;Name=VMS06_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16095 NZ_JAVXZI010000014.1 Protein Homology CDS 114430 115065 . + 0 ID=cds-WP_032622107.1;Parent=gene-VMS06_RS16095;Dbxref=GenBank:WP_032622107.1;Name=WP_032622107.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383660.1;locus_tag=VMS06_RS16095;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_032622107.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 115072 116136 . - . ID=gene-VMS06_RS16100;Name=VMS06_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16100 NZ_JAVXZI010000014.1 Protein Homology CDS 115072 116136 . - 0 ID=cds-WP_063148191.1;Parent=gene-VMS06_RS16100;Dbxref=GenBank:WP_063148191.1;Name=WP_063148191.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693993.1;locus_tag=VMS06_RS16100;product=fimbrial protein;protein_id=WP_063148191.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 116152 118644 . - . ID=gene-VMS06_RS16105;Name=VMS06_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16105 NZ_JAVXZI010000014.1 Protein Homology CDS 116152 118644 . - 0 ID=cds-WP_063148190.1;Parent=gene-VMS06_RS16105;Dbxref=GenBank:WP_063148190.1;Name=WP_063148190.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000782716.1;locus_tag=VMS06_RS16105;product=fimbria/pilus outer membrane usher protein;protein_id=WP_063148190.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 118660 119352 . - . ID=gene-VMS06_RS16110;Name=VMS06_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16110 NZ_JAVXZI010000014.1 Protein Homology CDS 118660 119352 . - 0 ID=cds-WP_001223973.1;Parent=gene-VMS06_RS16110;Dbxref=GenBank:WP_001223973.1;Name=WP_001223973.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001223973.1;locus_tag=VMS06_RS16110;product=fimbrial biogenesis chaperone;protein_id=WP_001223973.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 119405 119989 . - . ID=gene-VMS06_RS16115;Name=VMS06_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16115 NZ_JAVXZI010000014.1 Protein Homology CDS 119405 119989 . - 0 ID=cds-WP_022646579.1;Parent=gene-VMS06_RS16115;Dbxref=GenBank:WP_022646579.1;Name=WP_022646579.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094838.1;locus_tag=VMS06_RS16115;product=fimbrial protein;protein_id=WP_022646579.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 120364 121176 . + . ID=gene-VMS06_RS16120;Name=VMS06_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16120 NZ_JAVXZI010000014.1 Protein Homology CDS 120364 121176 . + 0 ID=cds-WP_022646580.1;Parent=gene-VMS06_RS16120;Dbxref=GenBank:WP_022646580.1;Name=WP_022646580.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000876162.1;locus_tag=VMS06_RS16120;product=winged helix-turn-helix domain-containing protein;protein_id=WP_022646580.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 121180 121665 . + . ID=gene-VMS06_RS16125;Name=VMS06_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16125 NZ_JAVXZI010000014.1 Protein Homology CDS 121180 121665 . + 0 ID=cds-WP_023298987.1;Parent=gene-VMS06_RS16125;Dbxref=GenBank:WP_023298987.1;Name=WP_023298987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177661.1;locus_tag=VMS06_RS16125;product=hypothetical protein;protein_id=WP_023298987.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 121893 122516 . + . ID=gene-VMS06_RS16130;Name=VMS06_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16130 NZ_JAVXZI010000014.1 Protein Homology CDS 121893 122516 . + 0 ID=cds-WP_003860995.1;Parent=gene-VMS06_RS16130;Dbxref=GenBank:WP_003860995.1;Name=WP_003860995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812472.1;locus_tag=VMS06_RS16130;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_003860995.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 122562 123239 . + . ID=gene-VMS06_RS16135;Name=VMS06_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16135 NZ_JAVXZI010000014.1 Protein Homology CDS 122562 123239 . + 0 ID=cds-WP_022646582.1;Parent=gene-VMS06_RS16135;Dbxref=GenBank:WP_022646582.1;Name=WP_022646582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812471.1;locus_tag=VMS06_RS16135;product=EcpB family pilus assembly chaperone;protein_id=WP_022646582.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 123246 125840 . + . ID=gene-VMS06_RS16140;Name=VMS06_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16140 NZ_JAVXZI010000014.1 Protein Homology CDS 123246 125840 . + 0 ID=cds-WP_032622041.1;Parent=gene-VMS06_RS16140;Dbxref=GenBank:WP_032622041.1;Name=WP_032622041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094843.1;locus_tag=VMS06_RS16140;product=CS1-pili formation C-terminal domain-containing protein;protein_id=WP_032622041.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 125818 127416 . + . ID=gene-VMS06_RS16145;Name=VMS06_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16145 NZ_JAVXZI010000014.1 Protein Homology CDS 125818 127416 . + 0 ID=cds-WP_022646584.1;Parent=gene-VMS06_RS16145;Dbxref=GenBank:WP_022646584.1;Name=WP_022646584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717908.1;locus_tag=VMS06_RS16145;product=hypothetical protein;protein_id=WP_022646584.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 127423 128076 . + . ID=gene-VMS06_RS16150;Name=VMS06_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16150 NZ_JAVXZI010000014.1 Protein Homology CDS 127423 128076 . + 0 ID=cds-WP_006812468.1;Parent=gene-VMS06_RS16150;Dbxref=GenBank:WP_006812468.1;Name=WP_006812468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812468.1;locus_tag=VMS06_RS16150;product=hypothetical protein;protein_id=WP_006812468.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 128150 128344 . + . ID=gene-VMS06_RS16155;Name=VMS06_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16155 NZ_JAVXZI010000014.1 Protein Homology CDS 128150 128344 . + 0 ID=cds-WP_022646586.1;Parent=gene-VMS06_RS16155;Dbxref=GenBank:WP_022646586.1;Name=WP_022646586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177667.1;locus_tag=VMS06_RS16155;product=hypothetical protein;protein_id=WP_022646586.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 128368 128553 . + . ID=gene-VMS06_RS16160;Name=VMS06_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16160 NZ_JAVXZI010000014.1 Protein Homology CDS 128368 128553 . + 0 ID=cds-WP_001196016.1;Parent=gene-VMS06_RS16160;Dbxref=GenBank:WP_001196016.1;Name=WP_001196016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094847.1;locus_tag=VMS06_RS16160;product=hypothetical protein;protein_id=WP_001196016.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 128621 130717 . + . ID=gene-VMS06_RS16165;Name=VMS06_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16165 NZ_JAVXZI010000014.1 Protein Homology CDS 128621 130717 . + 0 ID=cds-WP_063148189.1;Parent=gene-VMS06_RS16165;Dbxref=GenBank:WP_063148189.1;Name=WP_063148189.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812467.1;locus_tag=VMS06_RS16165;product=peptidase domain-containing ABC transporter;protein_id=WP_063148189.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 130714 131463 . + . ID=gene-VMS06_RS16170;Name=VMS06_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16170 NZ_JAVXZI010000014.1 Protein Homology CDS 130714 131463 . + 0 ID=cds-WP_063148188.1;Parent=gene-VMS06_RS16170;Dbxref=GenBank:WP_063148188.1;Name=WP_063148188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694789.1;locus_tag=VMS06_RS16170;product=hypothetical protein;protein_id=WP_063148188.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 131470 132720 . + . ID=gene-VMS06_RS16175;Name=VMS06_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16175 NZ_JAVXZI010000014.1 Protein Homology CDS 131470 132720 . + 0 ID=cds-WP_023298992.1;Parent=gene-VMS06_RS16175;Dbxref=GenBank:WP_023298992.1;Name=WP_023298992.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177670.1;locus_tag=VMS06_RS16175;product=HlyD family secretion protein;protein_id=WP_023298992.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 132810 133589 . + . ID=gene-VMS06_RS16180;Name=VMS06_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16180 NZ_JAVXZI010000014.1 Protein Homology CDS 132810 133589 . + 0 ID=cds-WP_063148187.1;Parent=gene-VMS06_RS16180;Dbxref=GenBank:WP_063148187.1;Name=WP_063148187.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212457.1;locus_tag=VMS06_RS16180;product=MBL fold metallo-hydrolase;protein_id=WP_063148187.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 133615 134601 . + . ID=gene-VMS06_RS16185;Name=VMS06_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16185 NZ_JAVXZI010000014.1 Protein Homology CDS 133615 134601 . + 0 ID=cds-WP_063148186.1;Parent=gene-VMS06_RS16185;Dbxref=GenBank:WP_063148186.1;Name=WP_063148186.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830097.1;locus_tag=VMS06_RS16185;product=GlxA family transcriptional regulator;protein_id=WP_063148186.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 134725 135054 . + . ID=gene-VMS06_RS16190;Name=VMS06_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16190 NZ_JAVXZI010000014.1 GeneMarkS-2+ CDS 134725 135054 . + 0 ID=cds-WP_022646592.1;Parent=gene-VMS06_RS16190;Dbxref=GenBank:WP_022646592.1;Name=WP_022646592.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS16190;product=hypothetical protein;protein_id=WP_022646592.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 135032 135835 . - . ID=gene-VMS06_RS16195;Name=VMS06_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16195 NZ_JAVXZI010000014.1 Protein Homology CDS 135032 135835 . - 0 ID=cds-WP_022646593.1;Parent=gene-VMS06_RS16195;Dbxref=GenBank:WP_022646593.1;Name=WP_022646593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831716.1;locus_tag=VMS06_RS16195;product=DUF4225 domain-containing protein;protein_id=WP_022646593.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 136011 137099 . - . ID=gene-VMS06_RS16200;Name=VMS06_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16200 NZ_JAVXZI010000014.1 Protein Homology CDS 136011 137099 . - 0 ID=cds-WP_323630679.1;Parent=gene-VMS06_RS16200;Dbxref=GenBank:WP_323630679.1;Name=WP_323630679.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882706.1;locus_tag=VMS06_RS16200;product=AAA family ATPase;protein_id=WP_323630679.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 137245 138204 . - . ID=gene-VMS06_RS16205;Name=VMS06_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16205 NZ_JAVXZI010000014.1 Protein Homology CDS 137245 138204 . - 0 ID=cds-WP_022646596.1;Parent=gene-VMS06_RS16205;Dbxref=GenBank:WP_022646596.1;Name=WP_022646596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208729.1;locus_tag=VMS06_RS16205;product=YbgA family protein;protein_id=WP_022646596.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 138307 138717 . - . ID=gene-VMS06_RS16210;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=VMS06_RS16210 NZ_JAVXZI010000014.1 Protein Homology CDS 138307 138717 . - 0 ID=cds-WP_046621820.1;Parent=gene-VMS06_RS16210;Dbxref=GenBank:WP_046621820.1;Name=WP_046621820.1;Ontology_term=GO:0006144,GO:0033971;gbkey=CDS;gene=uraH;go_function=hydroxyisourate hydrolase activity|0033971||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750474.1;locus_tag=VMS06_RS16210;product=hydroxyisourate hydrolase;protein_id=WP_046621820.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 138817 139542 . - . ID=gene-VMS06_RS16215;Name=VMS06_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16215 NZ_JAVXZI010000014.1 Protein Homology CDS 138817 139542 . - 0 ID=cds-WP_022646597.1;Parent=gene-VMS06_RS16215;Dbxref=GenBank:WP_022646597.1;Name=WP_022646597.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224878.1;locus_tag=VMS06_RS16215;product=MerR family transcriptional regulator;protein_id=WP_022646597.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 139660 140184 . + . ID=gene-VMS06_RS16220;Name=VMS06_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16220 NZ_JAVXZI010000014.1 Protein Homology CDS 139660 140184 . + 0 ID=cds-WP_022646598.1;Parent=gene-VMS06_RS16220;Dbxref=GenBank:WP_022646598.1;Name=WP_022646598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860954.1;locus_tag=VMS06_RS16220;product=lipocalin family protein;protein_id=WP_022646598.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 140186 141193 . - . ID=gene-VMS06_RS16225;Name=VMS06_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16225 NZ_JAVXZI010000014.1 Protein Homology CDS 140186 141193 . - 0 ID=cds-WP_063148184.1;Parent=gene-VMS06_RS16225;Dbxref=GenBank:WP_063148184.1;Name=WP_063148184.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383645.1;locus_tag=VMS06_RS16225;product=fimbrial protein;protein_id=WP_063148184.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 141193 141711 . - . ID=gene-VMS06_RS16230;Name=VMS06_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16230 NZ_JAVXZI010000014.1 Protein Homology CDS 141193 141711 . - 0 ID=cds-WP_063148183.1;Parent=gene-VMS06_RS16230;Dbxref=GenBank:WP_063148183.1;Name=WP_063148183.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860952.1;locus_tag=VMS06_RS16230;product=fimbrial protein;protein_id=WP_063148183.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 141702 144227 . - . ID=gene-VMS06_RS16235;Name=VMS06_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16235 NZ_JAVXZI010000014.1 Protein Homology CDS 141702 144227 . - 0 ID=cds-WP_063148182.1;Parent=gene-VMS06_RS16235;Dbxref=GenBank:WP_063148182.1;Name=WP_063148182.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570070.1;locus_tag=VMS06_RS16235;product=fimbria/pilus outer membrane usher protein;protein_id=WP_063148182.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 144251 144928 . - . ID=gene-VMS06_RS16240;Name=VMS06_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16240 NZ_JAVXZI010000014.1 Protein Homology CDS 144251 144928 . - 0 ID=cds-WP_022646602.1;Parent=gene-VMS06_RS16240;Dbxref=GenBank:WP_022646602.1;Name=WP_022646602.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693983.1;locus_tag=VMS06_RS16240;product=fimbrial biogenesis chaperone;protein_id=WP_022646602.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 144982 145566 . - . ID=gene-VMS06_RS16245;Name=VMS06_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16245 NZ_JAVXZI010000014.1 Protein Homology CDS 144982 145566 . - 0 ID=cds-WP_063148181.1;Parent=gene-VMS06_RS16245;Dbxref=GenBank:WP_063148181.1;Name=WP_063148181.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860947.1;locus_tag=VMS06_RS16245;product=fimbrial protein;protein_id=WP_063148181.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 145619 146221 . - . ID=gene-VMS06_RS16250;Name=VMS06_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16250 NZ_JAVXZI010000014.1 Protein Homology CDS 145619 146221 . - 0 ID=cds-WP_063148180.1;Parent=gene-VMS06_RS16250;Dbxref=GenBank:WP_063148180.1;Name=WP_063148180.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570068.1;locus_tag=VMS06_RS16250;product=helix-turn-helix domain-containing protein;protein_id=WP_063148180.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 147056 147844 . + . ID=gene-VMS06_RS16255;Name=VMS06_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16255 NZ_JAVXZI010000014.1 Protein Homology CDS 147056 147844 . + 0 ID=cds-WP_063148179.1;Parent=gene-VMS06_RS16255;Dbxref=GenBank:WP_063148179.1;Name=WP_063148179.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383642.1;locus_tag=VMS06_RS16255;product=winged helix-turn-helix domain-containing protein;protein_id=WP_063148179.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 147846 148325 . + . ID=gene-VMS06_RS16260;Name=VMS06_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16260 NZ_JAVXZI010000014.1 Protein Homology CDS 147846 148325 . + 0 ID=cds-WP_022646606.1;Parent=gene-VMS06_RS16260;Dbxref=GenBank:WP_022646606.1;Name=WP_022646606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693981.1;locus_tag=VMS06_RS16260;product=hypothetical protein;protein_id=WP_022646606.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 148568 149449 . + . ID=gene-VMS06_RS16265;Name=VMS06_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16265 NZ_JAVXZI010000014.1 Protein Homology CDS 148568 149449 . + 0 ID=cds-WP_032622044.1;Parent=gene-VMS06_RS16265;Dbxref=GenBank:WP_032622044.1;Name=WP_032622044.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383640.1;locus_tag=VMS06_RS16265;product=GlxA family transcriptional regulator;protein_id=WP_032622044.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 149514 149813 . - . ID=gene-VMS06_RS16270;Name=VMS06_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16270 NZ_JAVXZI010000014.1 Protein Homology CDS 149514 149813 . - 0 ID=cds-WP_063148178.1;Parent=gene-VMS06_RS16270;Dbxref=GenBank:WP_063148178.1;Name=WP_063148178.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002218230.1;locus_tag=VMS06_RS16270;product=helix-turn-helix domain-containing protein;protein_id=WP_063148178.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 149937 150278 . - . ID=gene-VMS06_RS16275;Name=VMS06_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16275 NZ_JAVXZI010000014.1 Protein Homology CDS 149937 150278 . - 0 ID=cds-WP_022646609.1;Parent=gene-VMS06_RS16275;Dbxref=GenBank:WP_022646609.1;Name=WP_022646609.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687666.1;locus_tag=VMS06_RS16275;product=SymE family type I addiction module toxin;protein_id=WP_022646609.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 150415 150594 . + . ID=gene-VMS06_RS16280;Name=VMS06_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16280 NZ_JAVXZI010000014.1 Protein Homology CDS 150415 150594 . + 0 ID=cds-WP_071785192.1;Parent=gene-VMS06_RS16280;Dbxref=GenBank:WP_071785192.1;Name=WP_071785192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016157780.1;locus_tag=VMS06_RS16280;product=toxin-antitoxin system HicB family antitoxin;protein_id=WP_071785192.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 150595 151434 . - . ID=gene-VMS06_RS16285;Name=VMS06_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16285 NZ_JAVXZI010000014.1 Protein Homology CDS 150595 151434 . - 0 ID=cds-WP_032626610.1;Parent=gene-VMS06_RS16285;Dbxref=GenBank:WP_032626610.1;Name=WP_032626610.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022633.7;locus_tag=VMS06_RS16285;product=DUF2971 domain-containing protein;protein_id=WP_032626610.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 151470 151564 . - . ID=gene-VMS06_RS16290;Name=VMS06_RS16290;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS16290 NZ_JAVXZI010000014.1 tRNAscan-SE tRNA 151470 151564 . - . ID=rna-VMS06_RS16290;Parent=gene-VMS06_RS16290;anticodon=(pos:complement(151528..151530));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS16290;product=tRNA-Sec NZ_JAVXZI010000014.1 tRNAscan-SE exon 151470 151564 . - . ID=exon-VMS06_RS16290-1;Parent=rna-VMS06_RS16290;anticodon=(pos:complement(151528..151530));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS16290;product=tRNA-Sec NZ_JAVXZI010000014.1 RefSeq gene 151853 153244 . + . ID=gene-VMS06_RS16295;Name=VMS06_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16295 NZ_JAVXZI010000014.1 Protein Homology CDS 151853 153244 . + 0 ID=cds-WP_015570055.1;Parent=gene-VMS06_RS16295;Dbxref=GenBank:WP_015570055.1;Name=WP_015570055.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693975.1;locus_tag=VMS06_RS16295;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_015570055.1;transl_table=11 NZ_JAVXZI010000014.1 RefSeq gene 153257 155575 . + . ID=gene-VMS06_RS16300;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=VMS06_RS16300 NZ_JAVXZI010000014.1 Protein Homology CDS 153257 155575 . + 0 ID=cds-WP_063148177.1;Parent=gene-VMS06_RS16300;Dbxref=GenBank:WP_063148177.1;Name=WP_063148177.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462649.1;locus_tag=VMS06_RS16300;product=alpha-xylosidase;protein_id=WP_063148177.1;transl_table=11 ##sequence-region NZ_JAVXZI010000015.1 1 148244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000015.1 RefSeq region 1 148244 . + . ID=NZ_JAVXZI010000015.1:1..148244;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000015.1 RefSeq gene 109 1635 . - . ID=gene-VMS06_RS16305;Name=VMS06_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16305 NZ_JAVXZI010000015.1 Protein Homology CDS 109 1635 . - 0 ID=cds-WP_323630680.1;Parent=gene-VMS06_RS16305;Dbxref=GenBank:WP_323630680.1;Name=WP_323630680.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016724.7;locus_tag=VMS06_RS16305;product=DEAD/DEAH box helicase family protein;protein_id=WP_323630680.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 1645 3522 . - . ID=gene-VMS06_RS16310;Name=VMS06_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16310 NZ_JAVXZI010000015.1 Protein Homology CDS 1645 3522 . - 0 ID=cds-WP_063148077.1;Parent=gene-VMS06_RS16310;Dbxref=GenBank:WP_063148077.1;Name=WP_063148077.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF013704.7;locus_tag=VMS06_RS16310;product=DNA methyltransferase;protein_id=WP_063148077.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 4117 4201 . - . ID=gene-VMS06_RS16315;Name=VMS06_RS16315;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS16315 NZ_JAVXZI010000015.1 tRNAscan-SE tRNA 4117 4201 . - . ID=rna-VMS06_RS16315;Parent=gene-VMS06_RS16315;anticodon=(pos:complement(4165..4167));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS16315;product=tRNA-Leu NZ_JAVXZI010000015.1 tRNAscan-SE exon 4117 4201 . - . ID=exon-VMS06_RS16315-1;Parent=rna-VMS06_RS16315;anticodon=(pos:complement(4165..4167));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS16315;product=tRNA-Leu NZ_JAVXZI010000015.1 RefSeq gene 4307 5029 . - . ID=gene-VMS06_RS16320;Name=VMS06_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16320 NZ_JAVXZI010000015.1 Protein Homology CDS 4307 5029 . - 0 ID=cds-WP_063148076.1;Parent=gene-VMS06_RS16320;Dbxref=GenBank:WP_063148076.1;Name=WP_063148076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862944.1;locus_tag=VMS06_RS16320;product=hypothetical protein;protein_id=WP_063148076.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 5060 5818 . - . ID=gene-VMS06_RS16325;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=protein_coding;locus_tag=VMS06_RS16325 NZ_JAVXZI010000015.1 Protein Homology CDS 5060 5818 . - 0 ID=cds-WP_063148075.1;Parent=gene-VMS06_RS16325;Dbxref=GenBank:WP_063148075.1;Name=WP_063148075.1;Ontology_term=GO:0006400,GO:0004497,GO:0045301,GO:0046872;gbkey=CDS;gene=miaE;go_function=monooxygenase activity|0004497||IEA,tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA,metal ion binding|0046872||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810299.1;locus_tag=VMS06_RS16325;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;protein_id=WP_063148075.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 5865 6290 . - . ID=gene-VMS06_RS16330;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=VMS06_RS16330 NZ_JAVXZI010000015.1 Protein Homology CDS 5865 6290 . - 0 ID=cds-WP_032625251.1;Parent=gene-VMS06_RS16330;Dbxref=GenBank:WP_032625251.1;Name=WP_032625251.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463330.1;locus_tag=VMS06_RS16330;product=ribonuclease E inhibitor RraB;protein_id=WP_032625251.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 6390 6485 . + . ID=gene-VMS06_RS16335;Name=argL;gbkey=Gene;gene=argL;gene_biotype=protein_coding;locus_tag=VMS06_RS16335 NZ_JAVXZI010000015.1 Protein Homology CDS 6390 6485 . + 0 ID=cds-WP_213083700.1;Parent=gene-VMS06_RS16335;Dbxref=GenBank:WP_213083700.1;Name=WP_213083700.1;gbkey=CDS;gene=argL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051174.1;locus_tag=VMS06_RS16335;product=putative translational regulatory protein ArgL;protein_id=WP_213083700.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 6455 7459 . + . ID=gene-VMS06_RS16340;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=VMS06_RS16340 NZ_JAVXZI010000015.1 Protein Homology CDS 6455 7459 . + 0 ID=cds-WP_023299201.1;Parent=gene-VMS06_RS16340;Dbxref=GenBank:WP_023299201.1;Name=WP_023299201.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414807.1;locus_tag=VMS06_RS16340;product=ornithine carbamoyltransferase;protein_id=WP_023299201.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 7910 8671 . + . ID=gene-VMS06_RS16345;Name=xynR;gbkey=Gene;gene=xynR;gene_biotype=protein_coding;locus_tag=VMS06_RS16345 NZ_JAVXZI010000015.1 Protein Homology CDS 7910 8671 . + 0 ID=cds-WP_038415186.1;Parent=gene-VMS06_RS16345;Dbxref=GenBank:WP_038415186.1;Name=WP_038415186.1;gbkey=CDS;gene=xynR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004123850.1;locus_tag=VMS06_RS16345;product=DNA-binding transcriptional repressor XynR;protein_id=WP_038415186.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 8656 10266 . - . ID=gene-VMS06_RS16350;Name=VMS06_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16350 NZ_JAVXZI010000015.1 Protein Homology CDS 8656 10266 . - 0 ID=cds-WP_063843841.1;Parent=gene-VMS06_RS16350;Dbxref=GenBank:WP_063843841.1;Name=WP_063843841.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862929.1;locus_tag=VMS06_RS16350;product=glycoside hydrolase family 43 protein;protein_id=WP_063843841.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 10278 11660 . - . ID=gene-VMS06_RS16355;Name=VMS06_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16355 NZ_JAVXZI010000015.1 Protein Homology CDS 10278 11660 . - 0 ID=cds-WP_023299198.1;Parent=gene-VMS06_RS16355;Dbxref=GenBank:WP_023299198.1;Name=WP_023299198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414804.1;locus_tag=VMS06_RS16355;product=MFS transporter;protein_id=WP_023299198.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 11887 13854 . - . ID=gene-VMS06_RS16360;Name=yagF;gbkey=Gene;gene=yagF;gene_biotype=protein_coding;locus_tag=VMS06_RS16360 NZ_JAVXZI010000015.1 Protein Homology CDS 11887 13854 . - 0 ID=cds-WP_063148073.1;Parent=gene-VMS06_RS16360;Dbxref=GenBank:WP_063148073.1;Name=WP_063148073.1;gbkey=CDS;gene=yagF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414803.1;locus_tag=VMS06_RS16360;product=xylonate dehydratase YagF;protein_id=WP_063148073.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 13869 14777 . - . ID=gene-VMS06_RS16365;Name=yagE;gbkey=Gene;gene=yagE;gene_biotype=protein_coding;locus_tag=VMS06_RS16365 NZ_JAVXZI010000015.1 Protein Homology CDS 13869 14777 . - 0 ID=cds-WP_063148072.1;Parent=gene-VMS06_RS16365;Dbxref=GenBank:WP_063148072.1;Name=WP_063148072.1;gbkey=CDS;gene=yagE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414802.2;locus_tag=VMS06_RS16365;product=2-keto-3-deoxygluconate aldolase;protein_id=WP_063148072.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 15016 15468 . - . ID=gene-VMS06_RS16370;Name=VMS06_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16370 NZ_JAVXZI010000015.1 Protein Homology CDS 15016 15468 . - 0 ID=cds-WP_022646886.1;Parent=gene-VMS06_RS16370;Dbxref=GenBank:WP_022646886.1;Name=WP_022646886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427341.1;locus_tag=VMS06_RS16370;product=YhcH/YjgK/YiaL family protein;protein_id=WP_022646886.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 16144 17364 . + . ID=gene-VMS06_RS16375;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=VMS06_RS16375 NZ_JAVXZI010000015.1 Protein Homology CDS 16144 17364 . + 0 ID=cds-WP_023299194.1;Parent=gene-VMS06_RS16375;Dbxref=GenBank:WP_023299194.1;Name=WP_023299194.1;Ontology_term=GO:0006527,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463327.1;locus_tag=VMS06_RS16375;product=arginine deiminase;protein_id=WP_023299194.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 17375 18286 . + . ID=gene-VMS06_RS16380;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=VMS06_RS16380 NZ_JAVXZI010000015.1 Protein Homology CDS 17375 18286 . + 0 ID=cds-WP_022646884.1;Parent=gene-VMS06_RS16380;Dbxref=GenBank:WP_022646884.1;Name=WP_022646884.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810310.1;locus_tag=VMS06_RS16380;product=carbamate kinase;protein_id=WP_022646884.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 18416 19420 . + . ID=gene-VMS06_RS16385;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=VMS06_RS16385 NZ_JAVXZI010000015.1 Protein Homology CDS 18416 19420 . + 0 ID=cds-WP_063148071.1;Parent=gene-VMS06_RS16385;Dbxref=GenBank:WP_063148071.1;Name=WP_063148071.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463325.1;locus_tag=VMS06_RS16385;product=ornithine carbamoyltransferase;protein_id=WP_063148071.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 19467 20870 . + . ID=gene-VMS06_RS16390;Name=VMS06_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16390 NZ_JAVXZI010000015.1 Protein Homology CDS 19467 20870 . + 0 ID=cds-WP_022646882.1;Parent=gene-VMS06_RS16390;Dbxref=GenBank:WP_022646882.1;Name=WP_022646882.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000514417.1;locus_tag=VMS06_RS16390;product=YfcC family protein;protein_id=WP_022646882.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 20951 21430 . + . ID=gene-VMS06_RS16395;Name=VMS06_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16395 NZ_JAVXZI010000015.1 Protein Homology CDS 20951 21430 . + 0 ID=cds-WP_003863366.1;Parent=gene-VMS06_RS16395;Dbxref=GenBank:WP_003863366.1;Name=WP_003863366.1;Ontology_term=GO:1900079,GO:0003677,GO:0003700,GO:0034618;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,arginine binding|0034618||IEA;go_process=regulation of arginine biosynthetic process|1900079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863366.1;locus_tag=VMS06_RS16395;product=arginine repressor;protein_id=WP_003863366.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq pseudogene 21434 21551 . - . ID=gene-VMS06_RS16400;Name=VMS06_RS16400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS16400;pseudo=true NZ_JAVXZI010000015.1 Protein Homology CDS 21434 21551 . - 0 ID=cds-VMS06_RS16400;Parent=gene-VMS06_RS16400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_453732.1;locus_tag=VMS06_RS16400;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 21531 21635 . + . ID=gene-VMS06_RS16405;Name=VMS06_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16405 NZ_JAVXZI010000015.1 Protein Homology CDS 21531 21635 . + 0 ID=cds-WP_022646880.1;Parent=gene-VMS06_RS16405;Dbxref=GenBank:WP_022646880.1;Name=WP_022646880.1;Ontology_term=GO:0019856;gbkey=CDS;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886930.1;locus_tag=VMS06_RS16405;product=pyrBI operon leader peptide;protein_id=WP_022646880.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 21670 22602 . + . ID=gene-VMS06_RS16410;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=VMS06_RS16410 NZ_JAVXZI010000015.1 Protein Homology CDS 21670 22602 . + 0 ID=cds-WP_003863368.1;Parent=gene-VMS06_RS16410;Dbxref=GenBank:WP_003863368.1;Name=WP_003863368.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012015860.1;locus_tag=VMS06_RS16410;product=aspartate carbamoyltransferase;protein_id=WP_003863368.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 22615 23076 . + . ID=gene-VMS06_RS16415;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=VMS06_RS16415 NZ_JAVXZI010000015.1 Protein Homology CDS 22615 23076 . + 0 ID=cds-WP_003863370.1;Parent=gene-VMS06_RS16415;Dbxref=GenBank:WP_003863370.1;Name=WP_003863370.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=VMS06_RS16415;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_003863370.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 23150 23536 . + . ID=gene-VMS06_RS16420;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=VMS06_RS16420 NZ_JAVXZI010000015.1 Protein Homology CDS 23150 23536 . + 0 ID=cds-WP_003863373.1;Parent=gene-VMS06_RS16420;Dbxref=GenBank:WP_003863373.1;Name=WP_003863373.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418664.2;locus_tag=VMS06_RS16420;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_003863373.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 23673 25124 . + . ID=gene-VMS06_RS16425;Name=gbpA;gbkey=Gene;gene=gbpA;gene_biotype=protein_coding;locus_tag=VMS06_RS16425 NZ_JAVXZI010000015.1 Protein Homology CDS 23673 25124 . + 0 ID=cds-WP_063148070.1;Parent=gene-VMS06_RS16425;Dbxref=GenBank:WP_063148070.1;Name=WP_063148070.1;gbkey=CDS;gene=gbpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694635.1;locus_tag=VMS06_RS16425;product=N-acetylglucosamine-binding protein GbpA;protein_id=WP_063148070.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 25314 27698 . - . ID=gene-VMS06_RS16430;Name=VMS06_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16430 NZ_JAVXZI010000015.1 Protein Homology CDS 25314 27698 . - 0 ID=cds-WP_063148069.1;Parent=gene-VMS06_RS16430;Dbxref=GenBank:WP_063148069.1;Name=WP_063148069.1;Ontology_term=GO:0005975,GO:0004563;gbkey=CDS;go_function=beta-N-acetylhexosaminidase activity|0004563||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383906.1;locus_tag=VMS06_RS16430;product=beta-N-acetylhexosaminidase;protein_id=WP_063148069.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 27899 30607 . - . ID=gene-VMS06_RS16435;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=VMS06_RS16435 NZ_JAVXZI010000015.1 Protein Homology CDS 27899 30607 . - 0 ID=cds-WP_022646877.1;Parent=gene-VMS06_RS16435;Dbxref=GenBank:WP_022646877.1;Name=WP_022646877.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224801.1;locus_tag=VMS06_RS16435;product=magnesium-translocating P-type ATPase;protein_id=WP_022646877.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 30994 31941 . + . ID=gene-VMS06_RS16440;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=VMS06_RS16440 NZ_JAVXZI010000015.1 Protein Homology CDS 30994 31941 . + 0 ID=cds-WP_022646876.1;Parent=gene-VMS06_RS16440;Dbxref=GenBank:WP_022646876.1;Name=WP_022646876.1;Ontology_term=GO:0005991,GO:0006355,GO:0045892,GO:0003677;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA;go_process=trehalose metabolic process|0005991||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709960.1;locus_tag=VMS06_RS16440;product=trehalose operon repressor TreR;protein_id=WP_022646876.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 32069 33487 . + . ID=gene-VMS06_RS16445;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=VMS06_RS16445 NZ_JAVXZI010000015.1 Protein Homology CDS 32069 33487 . + 0 ID=cds-WP_022646875.1;Parent=gene-VMS06_RS16445;Dbxref=GenBank:WP_022646875.1;Name=WP_022646875.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=VMS06_RS16445;product=PTS trehalose transporter subunit IIBC;protein_id=WP_022646875.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 33539 35182 . + . ID=gene-VMS06_RS16450;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=VMS06_RS16450 NZ_JAVXZI010000015.1 Protein Homology CDS 33539 35182 . + 0 ID=cds-WP_063148068.1;Parent=gene-VMS06_RS16450;Dbxref=GenBank:WP_063148068.1;Name=WP_063148068.1;Ontology_term=GO:0005991,GO:0008788,GO:0005737;gbkey=CDS;gene=treC;go_component=cytoplasm|0005737||IEA;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882299.1;locus_tag=VMS06_RS16450;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_063148068.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 35556 37694 . + . ID=gene-VMS06_RS16455;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=VMS06_RS16455 NZ_JAVXZI010000015.1 Protein Homology CDS 35556 37694 . + 0 ID=cds-WP_023305323.1;Parent=gene-VMS06_RS16455;Dbxref=GenBank:WP_023305323.1;Name=WP_023305323.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463313.1;locus_tag=VMS06_RS16455;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_023305323.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 37800 38264 . + . ID=gene-VMS06_RS16460;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=VMS06_RS16460 NZ_JAVXZI010000015.1 Protein Homology CDS 37800 38264 . + 0 ID=cds-WP_022646867.1;Parent=gene-VMS06_RS16460;Dbxref=GenBank:WP_022646867.1;Name=WP_022646867.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313241.1;locus_tag=VMS06_RS16460;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_022646867.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 38297 40207 . - . ID=gene-VMS06_RS16465;Name=VMS06_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16465 NZ_JAVXZI010000015.1 Protein Homology CDS 38297 40207 . - 0 ID=cds-WP_023305322.1;Parent=gene-VMS06_RS16465;Dbxref=GenBank:WP_023305322.1;Name=WP_023305322.1;Ontology_term=GO:0006355,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427362.1;locus_tag=VMS06_RS16465;product=BglG family transcription antiterminator;protein_id=WP_023305322.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 40227 41363 . - . ID=gene-VMS06_RS16470;Name=VMS06_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16470 NZ_JAVXZI010000015.1 Protein Homology CDS 40227 41363 . - 0 ID=cds-WP_046621038.1;Parent=gene-VMS06_RS16470;Dbxref=GenBank:WP_046621038.1;Name=WP_046621038.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501403.1;locus_tag=VMS06_RS16470;product=lactonase family protein;protein_id=WP_046621038.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 41483 42223 . - . ID=gene-VMS06_RS16475;Name=dagF;gbkey=Gene;gene=dagF;gene_biotype=protein_coding;locus_tag=VMS06_RS16475 NZ_JAVXZI010000015.1 Protein Homology CDS 41483 42223 . - 0 ID=cds-WP_022646864.1;Parent=gene-VMS06_RS16475;Dbxref=GenBank:WP_022646864.1;Name=WP_022646864.1;Ontology_term=GO:0008675;gbkey=CDS;gene=dagF;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694646.1;locus_tag=VMS06_RS16475;product=2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_022646864.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 42220 43338 . - . ID=gene-VMS06_RS16480;Name=VMS06_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16480 NZ_JAVXZI010000015.1 Protein Homology CDS 42220 43338 . - 0 ID=cds-WP_058677081.1;Parent=gene-VMS06_RS16480;Dbxref=GenBank:WP_058677081.1;Name=WP_058677081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224784.1;locus_tag=VMS06_RS16480;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_058677081.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 43322 44455 . - . ID=gene-VMS06_RS16485;Name=VMS06_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16485 NZ_JAVXZI010000015.1 Protein Homology CDS 43322 44455 . - 0 ID=cds-WP_032625226.1;Parent=gene-VMS06_RS16485;Dbxref=GenBank:WP_032625226.1;Name=WP_032625226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830444.1;locus_tag=VMS06_RS16485;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_032625226.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 44498 45139 . - . ID=gene-VMS06_RS16490;Name=VMS06_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16490 NZ_JAVXZI010000015.1 Protein Homology CDS 44498 45139 . - 0 ID=cds-WP_003856081.1;Parent=gene-VMS06_RS16490;Dbxref=GenBank:WP_003856081.1;Name=WP_003856081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000392125.1;locus_tag=VMS06_RS16490;product=DUF4310 family protein;protein_id=WP_003856081.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 45153 45929 . - . ID=gene-VMS06_RS16495;Name=VMS06_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16495 NZ_JAVXZI010000015.1 Protein Homology CDS 45153 45929 . - 0 ID=cds-WP_006810337.1;Parent=gene-VMS06_RS16495;Dbxref=GenBank:WP_006810337.1;Name=WP_006810337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224781.1;locus_tag=VMS06_RS16495;product=DUF4311 domain-containing protein;protein_id=WP_006810337.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 45952 46251 . - . ID=gene-VMS06_RS16500;Name=VMS06_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16500 NZ_JAVXZI010000015.1 Protein Homology CDS 45952 46251 . - 0 ID=cds-WP_006810338.1;Parent=gene-VMS06_RS16500;Dbxref=GenBank:WP_006810338.1;Name=WP_006810338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134212.1;locus_tag=VMS06_RS16500;product=DUF4312 family protein;protein_id=WP_006810338.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 46254 46616 . - . ID=gene-VMS06_RS16505;Name=VMS06_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16505 NZ_JAVXZI010000015.1 Protein Homology CDS 46254 46616 . - 0 ID=cds-WP_006810339.1;Parent=gene-VMS06_RS16505;Dbxref=GenBank:WP_006810339.1;Name=WP_006810339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463302.1;locus_tag=VMS06_RS16505;product=SFCGS family glycine-rich protein;protein_id=WP_006810339.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 46627 46965 . - . ID=gene-VMS06_RS16510;Name=VMS06_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16510 NZ_JAVXZI010000015.1 Protein Homology CDS 46627 46965 . - 0 ID=cds-WP_026080657.1;Parent=gene-VMS06_RS16510;Dbxref=GenBank:WP_026080657.1;Name=WP_026080657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224778.1;locus_tag=VMS06_RS16510;product=PRD domain-containing protein;protein_id=WP_026080657.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 47276 47662 . - . ID=gene-VMS06_RS16515;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=VMS06_RS16515 NZ_JAVXZI010000015.1 Protein Homology CDS 47276 47662 . - 0 ID=cds-WP_022646861.1;Parent=gene-VMS06_RS16515;Dbxref=GenBank:WP_022646861.1;Name=WP_022646861.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463300.1;locus_tag=VMS06_RS16515;product=cytochrome b562;protein_id=WP_022646861.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 47705 49057 . - . ID=gene-VMS06_RS16520;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=VMS06_RS16520 NZ_JAVXZI010000015.1 Protein Homology CDS 47705 49057 . - 0 ID=cds-WP_023299182.1;Parent=gene-VMS06_RS16520;Dbxref=GenBank:WP_023299182.1;Name=WP_023299182.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=VMS06_RS16520;product=metalloprotease PmbA;protein_id=WP_023299182.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 49153 49704 . + . ID=gene-VMS06_RS16525;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=VMS06_RS16525 NZ_JAVXZI010000015.1 Protein Homology CDS 49153 49704 . + 0 ID=cds-WP_003856072.1;Parent=gene-VMS06_RS16525;Dbxref=GenBank:WP_003856072.1;Name=WP_003856072.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168373.1;locus_tag=VMS06_RS16525;product=ribosome biogenesis factor YjgA;protein_id=WP_003856072.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 49791 51164 . - . ID=gene-VMS06_RS16530;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=VMS06_RS16530 NZ_JAVXZI010000015.1 Protein Homology CDS 49791 51164 . - 0 ID=cds-WP_022646859.1;Parent=gene-VMS06_RS16530;Dbxref=GenBank:WP_022646859.1;Name=WP_022646859.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224770.1;locus_tag=VMS06_RS16530;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_022646859.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 51344 52342 . + . ID=gene-VMS06_RS16535;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=VMS06_RS16535 NZ_JAVXZI010000015.1 Protein Homology CDS 51344 52342 . + 0 ID=cds-WP_022646858.1;Parent=gene-VMS06_RS16535;Dbxref=GenBank:WP_022646858.1;Name=WP_022646858.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=VMS06_RS16535;product=class 1 fructose-bisphosphatase;protein_id=WP_022646858.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 52382 53950 . - . ID=gene-VMS06_RS16540;Name=VMS06_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16540 NZ_JAVXZI010000015.1 Protein Homology CDS 52382 53950 . - 0 ID=cds-WP_045307825.1;Parent=gene-VMS06_RS16540;Dbxref=GenBank:WP_045307825.1;Name=WP_045307825.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810342.1;locus_tag=VMS06_RS16540;product=methyl-accepting chemotaxis protein;protein_id=WP_045307825.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 54044 55045 . - . ID=gene-VMS06_RS16545;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=VMS06_RS16545 NZ_JAVXZI010000015.1 Protein Homology CDS 54044 55045 . - 0 ID=cds-WP_063148067.1;Parent=gene-VMS06_RS16545;Dbxref=GenBank:WP_063148067.1;Name=WP_063148067.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501419.1;locus_tag=VMS06_RS16545;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_063148067.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 55032 56057 . - . ID=gene-VMS06_RS16550;Name=ytfT;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=VMS06_RS16550 NZ_JAVXZI010000015.1 Protein Homology CDS 55032 56057 . - 0 ID=cds-WP_161496795.1;Parent=gene-VMS06_RS16550;Dbxref=GenBank:WP_161496795.1;Name=WP_161496795.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfT;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224767.1;locus_tag=VMS06_RS16550;product=galactofuranose ABC transporter%2C ATP-binding protein YtfT;protein_id=WP_161496795.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 56068 57570 . - . ID=gene-VMS06_RS16555;Name=ytfR;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;locus_tag=VMS06_RS16555 NZ_JAVXZI010000015.1 Protein Homology CDS 56068 57570 . - 0 ID=cds-WP_063148066.1;Parent=gene-VMS06_RS16555;Dbxref=GenBank:WP_063148066.1;Name=WP_063148066.1;Ontology_term=GO:0042875,GO:0103116;gbkey=CDS;gene=ytfR;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224766.1;locus_tag=VMS06_RS16555;product=galactofuranose ABC transporter%2C ATP-binding protein YtfR;protein_id=WP_063148066.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 57701 58657 . - . ID=gene-VMS06_RS16560;Name=ytfQ;gbkey=Gene;gene=ytfQ;gene_biotype=protein_coding;locus_tag=VMS06_RS16560 NZ_JAVXZI010000015.1 Protein Homology CDS 57701 58657 . - 0 ID=cds-WP_046621030.1;Parent=gene-VMS06_RS16560;Dbxref=GenBank:WP_046621030.1;Name=WP_046621030.1;gbkey=CDS;gene=ytfQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313232.1;locus_tag=VMS06_RS16560;product=galactofuranose ABC transporter substrate-binding protein YtfQ;protein_id=WP_046621030.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 58967 59497 . + . ID=gene-VMS06_RS16565;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=VMS06_RS16565 NZ_JAVXZI010000015.1 Protein Homology CDS 58967 59497 . + 0 ID=cds-WP_006810347.1;Parent=gene-VMS06_RS16565;Dbxref=GenBank:WP_006810347.1;Name=WP_006810347.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=VMS06_RS16565;product=inorganic diphosphatase;protein_id=WP_006810347.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 59639 59983 . - . ID=gene-VMS06_RS16570;Name=VMS06_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16570 NZ_JAVXZI010000015.1 Protein Homology CDS 59639 59983 . - 0 ID=cds-WP_022646852.1;Parent=gene-VMS06_RS16570;Dbxref=GenBank:WP_022646852.1;Name=WP_022646852.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907370.1;locus_tag=VMS06_RS16570;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_022646852.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 59986 63762 . - . ID=gene-VMS06_RS16575;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=VMS06_RS16575 NZ_JAVXZI010000015.1 Protein Homology CDS 59986 63762 . - 0 ID=cds-WP_063148065.1;Parent=gene-VMS06_RS16575;Dbxref=GenBank:WP_063148065.1;Name=WP_063148065.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418642.1;locus_tag=VMS06_RS16575;product=autotransporter assembly complex protein TamB;protein_id=WP_063148065.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 63759 65492 . - . ID=gene-VMS06_RS16580;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=VMS06_RS16580 NZ_JAVXZI010000015.1 Protein Homology CDS 63759 65492 . - 0 ID=cds-WP_063148064.1;Parent=gene-VMS06_RS16580;Dbxref=GenBank:WP_063148064.1;Name=WP_063148064.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463270.1;locus_tag=VMS06_RS16580;product=autotransporter assembly complex protein TamA;protein_id=WP_063148064.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 65717 66358 . + . ID=gene-VMS06_RS16585;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=VMS06_RS16585 NZ_JAVXZI010000015.1 Protein Homology CDS 65717 66358 . + 0 ID=cds-WP_063148063.1;Parent=gene-VMS06_RS16585;Dbxref=GenBank:WP_063148063.1;Name=WP_063148063.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856057.1;locus_tag=VMS06_RS16585;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_063148063.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 66609 67946 . + . ID=gene-VMS06_RS16590;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;gene_synonym=ytfL;locus_tag=VMS06_RS16590 NZ_JAVXZI010000015.1 Protein Homology CDS 66609 67946 . + 0 ID=cds-WP_022646849.1;Parent=gene-VMS06_RS16590;Dbxref=GenBank:WP_022646849.1;Name=WP_022646849.1;Ontology_term=GO:0050660;gbkey=CDS;gene=paeA;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383933.1;locus_tag=VMS06_RS16590;product=polyamine export protein PaeA;protein_id=WP_022646849.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 68023 68229 . - . ID=gene-VMS06_RS16595;Name=VMS06_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16595 NZ_JAVXZI010000015.1 Protein Homology CDS 68023 68229 . - 0 ID=cds-WP_003856054.1;Parent=gene-VMS06_RS16595;Dbxref=GenBank:WP_003856054.1;Name=WP_003856054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=VMS06_RS16595;product=DUF1107 domain-containing protein;protein_id=WP_003856054.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 68554 69111 . + . ID=gene-VMS06_RS16600;Name=VMS06_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16600 NZ_JAVXZI010000015.1 Protein Homology CDS 68554 69111 . + 0 ID=cds-WP_063148062.1;Parent=gene-VMS06_RS16600;Dbxref=GenBank:WP_063148062.1;Name=WP_063148062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830421.1;locus_tag=VMS06_RS16600;product=YtfJ family protein;protein_id=WP_063148062.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 69105 69845 . - . ID=gene-VMS06_RS16605;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=VMS06_RS16605 NZ_JAVXZI010000015.1 Protein Homology CDS 69105 69845 . - 0 ID=cds-WP_022646848.1;Parent=gene-VMS06_RS16605;Dbxref=GenBank:WP_022646848.1;Name=WP_022646848.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313219.1;locus_tag=VMS06_RS16605;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_022646848.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 70036 71979 . + . ID=gene-VMS06_RS16610;Name=VMS06_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16610 NZ_JAVXZI010000015.1 Protein Homology CDS 70036 71979 . + 0 ID=cds-WP_063948706.1;Parent=gene-VMS06_RS16610;Dbxref=GenBank:WP_063948706.1;Name=WP_063948706.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463264.1;locus_tag=VMS06_RS16610;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_063948706.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 72073 72459 . - . ID=gene-VMS06_RS16615;Name=VMS06_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16615 NZ_JAVXZI010000015.1 Protein Homology CDS 72073 72459 . - 0 ID=cds-WP_022646846.1;Parent=gene-VMS06_RS16615;Dbxref=GenBank:WP_022646846.1;Name=WP_022646846.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168344.1;locus_tag=VMS06_RS16615;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_022646846.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 72544 73392 . + . ID=gene-VMS06_RS16620;Name=VMS06_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16620 NZ_JAVXZI010000015.1 Protein Homology CDS 72544 73392 . + 0 ID=cds-WP_063148060.1;Parent=gene-VMS06_RS16620;Dbxref=GenBank:WP_063148060.1;Name=WP_063148060.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224750.1;locus_tag=VMS06_RS16620;product=SDR family oxidoreductase;protein_id=WP_063148060.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 73474 74298 . + . ID=gene-VMS06_RS16625;Name=VMS06_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16625 NZ_JAVXZI010000015.1 Protein Homology CDS 73474 74298 . + 0 ID=cds-WP_032621407.1;Parent=gene-VMS06_RS16625;Dbxref=GenBank:WP_032621407.1;Name=WP_032621407.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810364.1;locus_tag=VMS06_RS16625;product=AraC family transcriptional regulator;protein_id=WP_032621407.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 74374 75339 . + . ID=gene-VMS06_RS16630;Name=VMS06_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16630 NZ_JAVXZI010000015.1 Protein Homology CDS 74374 75339 . + 0 ID=cds-WP_063148059.1;Parent=gene-VMS06_RS16630;Dbxref=GenBank:WP_063148059.1;Name=WP_063148059.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694663.1;locus_tag=VMS06_RS16630;product=DMT family transporter;protein_id=WP_063148059.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 75420 77066 . - . ID=gene-VMS06_RS16635;Name=VMS06_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16635 NZ_JAVXZI010000015.1 Protein Homology CDS 75420 77066 . - 0 ID=cds-WP_022646842.1;Parent=gene-VMS06_RS16635;Dbxref=GenBank:WP_022646842.1;Name=WP_022646842.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006179006.1;locus_tag=VMS06_RS16635;product=methyl-accepting chemotaxis protein;protein_id=WP_022646842.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 77312 77974 . + . ID=gene-VMS06_RS16640;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=VMS06_RS16640 NZ_JAVXZI010000015.1 Protein Homology CDS 77312 77974 . + 0 ID=cds-WP_023299148.1;Parent=gene-VMS06_RS16640;Dbxref=GenBank:WP_023299148.1;Name=WP_023299148.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418630.1;locus_tag=VMS06_RS16640;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_023299148.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 78061 79470 . - . ID=gene-VMS06_RS16645;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=VMS06_RS16645 NZ_JAVXZI010000015.1 Protein Homology CDS 78061 79470 . - 0 ID=cds-WP_022646840.1;Parent=gene-VMS06_RS16645;Dbxref=GenBank:WP_022646840.1;Name=WP_022646840.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463259.1;locus_tag=VMS06_RS16645;product=D-serine/D-alanine/glycine transporter;protein_id=WP_022646840.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 79785 80405 . - . ID=gene-VMS06_RS16650;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=VMS06_RS16650 NZ_JAVXZI010000015.1 Protein Homology CDS 79785 80405 . - 0 ID=cds-WP_022646839.1;Parent=gene-VMS06_RS16650;Dbxref=GenBank:WP_022646839.1;Name=WP_022646839.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=VMS06_RS16650;product=BamJ family beta-barrel-assembly machinery protein;protein_id=WP_022646839.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 80637 81275 . + . ID=gene-VMS06_RS16655;Name=VMS06_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16655 NZ_JAVXZI010000015.1 Protein Homology CDS 80637 81275 . + 0 ID=cds-WP_022646838.1;Parent=gene-VMS06_RS16655;Dbxref=GenBank:WP_022646838.1;Name=WP_022646838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418627.4;locus_tag=VMS06_RS16655;product=OapA family protein;protein_id=WP_022646838.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 81322 82251 . - . ID=gene-VMS06_RS16660;Name=VMS06_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16660 NZ_JAVXZI010000015.1 Protein Homology CDS 81322 82251 . - 0 ID=cds-WP_023299146.1;Parent=gene-VMS06_RS16660;Dbxref=GenBank:WP_023299146.1;Name=WP_023299146.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178998.1;locus_tag=VMS06_RS16660;product=DMT family transporter;protein_id=WP_023299146.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 82404 82853 . - . ID=gene-VMS06_RS16665;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=VMS06_RS16665 NZ_JAVXZI010000015.1 Protein Homology CDS 82404 82853 . - 0 ID=cds-WP_006810372.1;Parent=gene-VMS06_RS16665;Dbxref=GenBank:WP_006810372.1;Name=WP_006810372.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=VMS06_RS16665;product=50S ribosomal protein L9;protein_id=WP_006810372.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 82895 83122 . - . ID=gene-VMS06_RS16670;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=VMS06_RS16670 NZ_JAVXZI010000015.1 Protein Homology CDS 82895 83122 . - 0 ID=cds-WP_000135199.1;Parent=gene-VMS06_RS16670;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=VMS06_RS16670;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 83127 83441 . - . ID=gene-VMS06_RS16675;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=VMS06_RS16675 NZ_JAVXZI010000015.1 Protein Homology CDS 83127 83441 . - 0 ID=cds-WP_022646836.1;Parent=gene-VMS06_RS16675;Dbxref=GenBank:WP_022646836.1;Name=WP_022646836.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=VMS06_RS16675;product=primosomal replication protein N;protein_id=WP_022646836.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 83448 83843 . - . ID=gene-VMS06_RS16680;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=VMS06_RS16680 NZ_JAVXZI010000015.1 Protein Homology CDS 83448 83843 . - 0 ID=cds-WP_003856034.1;Parent=gene-VMS06_RS16680;Dbxref=GenBank:WP_003856034.1;Name=WP_003856034.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=VMS06_RS16680;product=30S ribosomal protein S6;protein_id=WP_003856034.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 84184 84459 . + . ID=gene-VMS06_RS16685;Name=yjfY;gbkey=Gene;gene=yjfY;gene_biotype=protein_coding;locus_tag=VMS06_RS16685 NZ_JAVXZI010000015.1 Protein Homology CDS 84184 84459 . + 0 ID=cds-WP_023299144.1;Parent=gene-VMS06_RS16685;Dbxref=GenBank:WP_023299144.1;Name=WP_023299144.1;gbkey=CDS;gene=yjfY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882245.1;locus_tag=VMS06_RS16685;product=DUF1471 family protein YjfY;protein_id=WP_023299144.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 84593 85279 . - . ID=gene-VMS06_RS16690;Name=VMS06_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16690 NZ_JAVXZI010000015.1 Protein Homology CDS 84593 85279 . - 0 ID=cds-WP_022646834.1;Parent=gene-VMS06_RS16690;Dbxref=GenBank:WP_022646834.1;Name=WP_022646834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463249.1;locus_tag=VMS06_RS16690;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_022646834.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 85272 86132 . - . ID=gene-VMS06_RS16695;Name=VMS06_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16695 NZ_JAVXZI010000015.1 Protein Homology CDS 85272 86132 . - 0 ID=cds-WP_063146648.1;Parent=gene-VMS06_RS16695;Dbxref=GenBank:WP_063146648.1;Name=WP_063146648.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882934.1;locus_tag=VMS06_RS16695;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_063146648.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 86142 86792 . - . ID=gene-VMS06_RS16700;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=VMS06_RS16700 NZ_JAVXZI010000015.1 Protein Homology CDS 86142 86792 . - 0 ID=cds-WP_022646832.1;Parent=gene-VMS06_RS16700;Dbxref=GenBank:WP_022646832.1;Name=WP_022646832.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463247.1;locus_tag=VMS06_RS16700;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_022646832.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 86805 87272 . - . ID=gene-VMS06_RS16705;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=VMS06_RS16705 NZ_JAVXZI010000015.1 Protein Homology CDS 86805 87272 . - 0 ID=cds-WP_003856024.1;Parent=gene-VMS06_RS16705;Dbxref=GenBank:WP_003856024.1;Name=WP_003856024.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224735.1;locus_tag=VMS06_RS16705;product=PTS ascorbate transporter subunit IIA;protein_id=WP_003856024.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 87282 87587 . - . ID=gene-VMS06_RS16710;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=VMS06_RS16710 NZ_JAVXZI010000015.1 Protein Homology CDS 87282 87587 . - 0 ID=cds-WP_003856022.1;Parent=gene-VMS06_RS16710;Dbxref=GenBank:WP_003856022.1;Name=WP_003856022.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463245.1;locus_tag=VMS06_RS16710;product=PTS ascorbate transporter subunit IIB;protein_id=WP_003856022.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 87600 89000 . - . ID=gene-VMS06_RS16715;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=VMS06_RS16715 NZ_JAVXZI010000015.1 Protein Homology CDS 87600 89000 . - 0 ID=cds-WP_063148058.1;Parent=gene-VMS06_RS16715;Dbxref=GenBank:WP_063148058.1;Name=WP_063148058.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882935.1;locus_tag=VMS06_RS16715;product=PTS ascorbate transporter subunit IIC;protein_id=WP_063148058.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 89360 90424 . + . ID=gene-VMS06_RS16720;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=VMS06_RS16720 NZ_JAVXZI010000015.1 Protein Homology CDS 89360 90424 . + 0 ID=cds-WP_058647072.1;Parent=gene-VMS06_RS16720;Dbxref=GenBank:WP_058647072.1;Name=WP_058647072.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=VMS06_RS16720;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_058647072.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 90535 91290 . + . ID=gene-VMS06_RS16725;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=VMS06_RS16725 NZ_JAVXZI010000015.1 Protein Homology CDS 90535 91290 . + 0 ID=cds-WP_003856014.1;Parent=gene-VMS06_RS16725;Dbxref=GenBank:WP_003856014.1;Name=WP_003856014.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313194.1;locus_tag=VMS06_RS16725;product=HTH-type transcriptional regulator UlaR;protein_id=WP_003856014.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 91287 92009 . - . ID=gene-VMS06_RS16730;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=VMS06_RS16730 NZ_JAVXZI010000015.1 Protein Homology CDS 91287 92009 . - 0 ID=cds-WP_063148057.1;Parent=gene-VMS06_RS16730;Dbxref=GenBank:WP_063148057.1;Name=WP_063148057.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882937.1;locus_tag=VMS06_RS16730;product=esterase;protein_id=WP_063148057.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 92147 92476 . + . ID=gene-VMS06_RS16735;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=VMS06_RS16735 NZ_JAVXZI010000015.1 Protein Homology CDS 92147 92476 . + 0 ID=cds-WP_003856011.1;Parent=gene-VMS06_RS16735;Dbxref=GenBank:WP_003856011.1;Name=WP_003856011.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463240.1;locus_tag=VMS06_RS16735;product=biofilm peroxide resistance protein BsmA;protein_id=WP_003856011.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 92625 92900 . + . ID=gene-VMS06_RS16740;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=VMS06_RS16740 NZ_JAVXZI010000015.1 Protein Homology CDS 92625 92900 . + 0 ID=cds-WP_017694671.1;Parent=gene-VMS06_RS16740;Dbxref=GenBank:WP_017694671.1;Name=WP_017694671.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810381.1;locus_tag=VMS06_RS16740;product=DUF1471 family protease activator YjfN;protein_id=WP_017694671.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 93071 95002 . + . ID=gene-VMS06_RS16745;Name=VMS06_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16745 NZ_JAVXZI010000015.1 Protein Homology CDS 93071 95002 . + 0 ID=cds-WP_023299139.1;Parent=gene-VMS06_RS16745;Dbxref=GenBank:WP_023299139.1;Name=WP_023299139.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810382.1;locus_tag=VMS06_RS16745;product=methyl-accepting chemotaxis protein;protein_id=WP_023299139.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 94999 96621 . - . ID=gene-VMS06_RS16750;Name=VMS06_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16750 NZ_JAVXZI010000015.1 Protein Homology CDS 94999 96621 . - 0 ID=cds-WP_063148055.1;Parent=gene-VMS06_RS16750;Dbxref=GenBank:WP_063148055.1;Name=WP_063148055.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882234.1;locus_tag=VMS06_RS16750;product=isovaleryl-CoA dehydrogenase;protein_id=WP_063148055.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 96817 98091 . + . ID=gene-VMS06_RS16755;Name=VMS06_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16755 NZ_JAVXZI010000015.1 Protein Homology CDS 96817 98091 . + 0 ID=cds-WP_063148054.1;Parent=gene-VMS06_RS16755;Dbxref=GenBank:WP_063148054.1;Name=WP_063148054.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810384.1;locus_tag=VMS06_RS16755;product=MFS transporter;protein_id=WP_063148054.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 98183 98914 . - . ID=gene-VMS06_RS16760;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=VMS06_RS16760 NZ_JAVXZI010000015.1 Protein Homology CDS 98183 98914 . - 0 ID=cds-WP_003856001.1;Parent=gene-VMS06_RS16760;Dbxref=GenBank:WP_003856001.1;Name=WP_003856001.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006686313.1;locus_tag=VMS06_RS16760;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_003856001.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 98979 101420 . - . ID=gene-VMS06_RS16765;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=VMS06_RS16765 NZ_JAVXZI010000015.1 Protein Homology CDS 98979 101420 . - 0 ID=cds-WP_023299135.1;Parent=gene-VMS06_RS16765;Dbxref=GenBank:WP_023299135.1;Name=WP_023299135.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463229.1;locus_tag=VMS06_RS16765;product=ribonuclease R;protein_id=WP_023299135.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 101459 101884 . - . ID=gene-VMS06_RS16770;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=VMS06_RS16770 NZ_JAVXZI010000015.1 Protein Homology CDS 101459 101884 . - 0 ID=cds-WP_063148092.1;Parent=gene-VMS06_RS16770;Dbxref=GenBank:WP_063148092.1;Name=WP_063148092.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=VMS06_RS16770;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_063148092.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 102077 103375 . - . ID=gene-VMS06_RS16775;Name=VMS06_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16775 NZ_JAVXZI010000015.1 Protein Homology CDS 102077 103375 . - 0 ID=cds-WP_032621775.1;Parent=gene-VMS06_RS16775;Dbxref=GenBank:WP_032621775.1;Name=WP_032621775.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=VMS06_RS16775;product=adenylosuccinate synthase;protein_id=WP_032621775.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 103480 103677 . - . ID=gene-VMS06_RS16780;Name=VMS06_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16780 NZ_JAVXZI010000015.1 Protein Homology CDS 103480 103677 . - 0 ID=cds-WP_003855996.1;Parent=gene-VMS06_RS16780;Dbxref=GenBank:WP_003855996.1;Name=WP_003855996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224722.1;locus_tag=VMS06_RS16780;product=DUF2065 domain-containing protein;protein_id=WP_003855996.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 103749 104753 . - . ID=gene-VMS06_RS16785;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=VMS06_RS16785 NZ_JAVXZI010000015.1 Protein Homology CDS 103749 104753 . - 0 ID=cds-WP_022646821.1;Parent=gene-VMS06_RS16785;Dbxref=GenBank:WP_022646821.1;Name=WP_022646821.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313178.1;locus_tag=VMS06_RS16785;product=protease modulator HflC;protein_id=WP_022646821.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 104756 106015 . - . ID=gene-VMS06_RS16790;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=VMS06_RS16790 NZ_JAVXZI010000015.1 Protein Homology CDS 104756 106015 . - 0 ID=cds-WP_022646820.1;Parent=gene-VMS06_RS16790;Dbxref=GenBank:WP_022646820.1;Name=WP_022646820.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224718.1;locus_tag=VMS06_RS16790;product=FtsH protease activity modulator HflK;protein_id=WP_022646820.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 106072 107352 . - . ID=gene-VMS06_RS16795;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=VMS06_RS16795 NZ_JAVXZI010000015.1 Protein Homology CDS 106072 107352 . - 0 ID=cds-WP_003855991.1;Parent=gene-VMS06_RS16795;Dbxref=GenBank:WP_003855991.1;Name=WP_003855991.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313176.1;locus_tag=VMS06_RS16795;product=ribosome rescue GTPase HflX;protein_id=WP_003855991.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 107427 107738 . - . ID=gene-VMS06_RS16800;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=VMS06_RS16800 NZ_JAVXZI010000015.1 Protein Homology CDS 107427 107738 . - 0 ID=cds-WP_023299134.1;Parent=gene-VMS06_RS16800;Dbxref=GenBank:WP_023299134.1;Name=WP_023299134.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313175.1;locus_tag=VMS06_RS16800;product=RNA chaperone Hfq;protein_id=WP_023299134.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 107824 108774 . - . ID=gene-VMS06_RS16805;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=VMS06_RS16805 NZ_JAVXZI010000015.1 Protein Homology CDS 107824 108774 . - 0 ID=cds-WP_023299133.1;Parent=gene-VMS06_RS16805;Dbxref=GenBank:WP_023299133.1;Name=WP_023299133.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003855989.1;locus_tag=VMS06_RS16805;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_023299133.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 108767 110611 . - . ID=gene-VMS06_RS16810;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=VMS06_RS16810 NZ_JAVXZI010000015.1 Protein Homology CDS 108767 110611 . - 0 ID=cds-WP_048966072.1;Parent=gene-VMS06_RS16810;Dbxref=GenBank:WP_048966072.1;Name=WP_048966072.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572466.1;locus_tag=VMS06_RS16810;product=DNA mismatch repair endonuclease MutL;protein_id=WP_048966072.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 110621 111961 . - . ID=gene-VMS06_RS16815;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=VMS06_RS16815 NZ_JAVXZI010000015.1 Protein Homology CDS 110621 111961 . - 0 ID=cds-WP_063148053.1;Parent=gene-VMS06_RS16815;Dbxref=GenBank:WP_063148053.1;Name=WP_063148053.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003855985.1;locus_tag=VMS06_RS16815;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_063148053.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 111978 112439 . - . ID=gene-VMS06_RS16820;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=VMS06_RS16820 NZ_JAVXZI010000015.1 Protein Homology CDS 111978 112439 . - 0 ID=cds-WP_003855970.1;Parent=gene-VMS06_RS16820;Dbxref=GenBank:WP_003855970.1;Name=WP_003855970.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313171.1;locus_tag=VMS06_RS16820;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_003855970.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 112432 113955 . - . ID=gene-VMS06_RS16825;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=VMS06_RS16825 NZ_JAVXZI010000015.1 Protein Homology CDS 112432 113955 . - 0 ID=cds-WP_063148052.1;Parent=gene-VMS06_RS16825;Dbxref=GenBank:WP_063148052.1;Name=WP_063148052.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383959.1;locus_tag=VMS06_RS16825;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_063148052.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 113954 115093 . + . ID=gene-VMS06_RS16830;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=VMS06_RS16830 NZ_JAVXZI010000015.1 Protein Homology CDS 113954 115093 . + 0 ID=cds-WP_015572463.1;Parent=gene-VMS06_RS16830;Dbxref=GenBank:WP_015572463.1;Name=WP_015572463.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383960.1;locus_tag=VMS06_RS16830;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_015572463.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 115364 115439 . - . ID=gene-VMS06_RS16835;Name=VMS06_RS16835;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS16835 NZ_JAVXZI010000015.1 tRNAscan-SE tRNA 115364 115439 . - . ID=rna-VMS06_RS16835;Parent=gene-VMS06_RS16835;anticodon=(pos:complement(115404..115406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS16835;product=tRNA-Gly NZ_JAVXZI010000015.1 tRNAscan-SE exon 115364 115439 . - . ID=exon-VMS06_RS16835-1;Parent=rna-VMS06_RS16835;anticodon=(pos:complement(115404..115406));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS16835;product=tRNA-Gly NZ_JAVXZI010000015.1 RefSeq gene 115485 115560 . - . ID=gene-VMS06_RS16840;Name=VMS06_RS16840;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS16840 NZ_JAVXZI010000015.1 tRNAscan-SE tRNA 115485 115560 . - . ID=rna-VMS06_RS16840;Parent=gene-VMS06_RS16840;anticodon=(pos:complement(115525..115527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS16840;product=tRNA-Gly NZ_JAVXZI010000015.1 tRNAscan-SE exon 115485 115560 . - . ID=exon-VMS06_RS16840-1;Parent=rna-VMS06_RS16840;anticodon=(pos:complement(115525..115527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS16840;product=tRNA-Gly NZ_JAVXZI010000015.1 RefSeq gene 115606 115681 . - . ID=gene-VMS06_RS16845;Name=VMS06_RS16845;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS16845 NZ_JAVXZI010000015.1 tRNAscan-SE tRNA 115606 115681 . - . ID=rna-VMS06_RS16845;Parent=gene-VMS06_RS16845;anticodon=(pos:complement(115646..115648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS16845;product=tRNA-Gly NZ_JAVXZI010000015.1 tRNAscan-SE exon 115606 115681 . - . ID=exon-VMS06_RS16845-1;Parent=rna-VMS06_RS16845;anticodon=(pos:complement(115646..115648));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS16845;product=tRNA-Gly NZ_JAVXZI010000015.1 RefSeq gene 115878 116423 . - . ID=gene-VMS06_RS16850;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=VMS06_RS16850 NZ_JAVXZI010000015.1 Protein Homology CDS 115878 116423 . - 0 ID=cds-WP_038415130.1;Parent=gene-VMS06_RS16850;Dbxref=GenBank:WP_038415130.1;Name=WP_038415130.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=VMS06_RS16850;product=oligoribonuclease;protein_id=WP_038415130.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 116531 117583 . + . ID=gene-VMS06_RS16855;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=VMS06_RS16855 NZ_JAVXZI010000015.1 Protein Homology CDS 116531 117583 . + 0 ID=cds-WP_072202591.1;Parent=gene-VMS06_RS16855;Dbxref=GenBank:WP_072202591.1;Name=WP_072202591.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313167.2;locus_tag=VMS06_RS16855;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_072202591.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 117681 118649 . + . ID=gene-VMS06_RS16860;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=VMS06_RS16860 NZ_JAVXZI010000015.1 Protein Homology CDS 117681 118649 . + 0 ID=cds-WP_022646813.1;Parent=gene-VMS06_RS16860;Dbxref=GenBank:WP_022646813.1;Name=WP_022646813.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003855963.1;locus_tag=VMS06_RS16860;product=archaetidylserine decarboxylase;protein_id=WP_022646813.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 118669 121992 . + . ID=gene-VMS06_RS16865;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=VMS06_RS16865 NZ_JAVXZI010000015.1 Protein Homology CDS 118669 121992 . + 0 ID=cds-WP_022646812.1;Parent=gene-VMS06_RS16865;Dbxref=GenBank:WP_022646812.1;Name=WP_022646812.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418583.1;locus_tag=VMS06_RS16865;product=miniconductance mechanosensitive channel MscM;protein_id=WP_022646812.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 122033 123532 . - . ID=gene-VMS06_RS16870;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=VMS06_RS16870 NZ_JAVXZI010000015.1 Protein Homology CDS 122033 123532 . - 0 ID=cds-WP_063148050.1;Parent=gene-VMS06_RS16870;Dbxref=GenBank:WP_063148050.1;Name=WP_063148050.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383962.1;locus_tag=VMS06_RS16870;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_063148050.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 123711 124688 . - . ID=gene-VMS06_RS16875;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=VMS06_RS16875 NZ_JAVXZI010000015.1 Protein Homology CDS 123711 124688 . - 0 ID=cds-WP_003855960.1;Parent=gene-VMS06_RS16875;Dbxref=GenBank:WP_003855960.1;Name=WP_003855960.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=VMS06_RS16875;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_003855960.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 124999 126789 . + . ID=gene-VMS06_RS16880;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=VMS06_RS16880 NZ_JAVXZI010000015.1 Protein Homology CDS 124999 126789 . + 0 ID=cds-WP_323630681.1;Parent=gene-VMS06_RS16880;Dbxref=GenBank:WP_323630681.1;Name=WP_323630681.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463207.1;locus_tag=VMS06_RS16880;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_323630681.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 126782 127516 . + . ID=gene-VMS06_RS16885;Name=VMS06_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16885 NZ_JAVXZI010000015.1 Protein Homology CDS 126782 127516 . + 0 ID=cds-WP_022646809.1;Parent=gene-VMS06_RS16885;Dbxref=GenBank:WP_022646809.1;Name=WP_022646809.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=VMS06_RS16885;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_022646809.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 127527 127922 . + . ID=gene-VMS06_RS16890;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=VMS06_RS16890 NZ_JAVXZI010000015.1 Protein Homology CDS 127527 127922 . + 0 ID=cds-WP_003855953.1;Parent=gene-VMS06_RS16890;Dbxref=GenBank:WP_003855953.1;Name=WP_003855953.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463205.1;locus_tag=VMS06_RS16890;product=fumarate reductase subunit FrdC;protein_id=WP_003855953.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 127933 128292 . + . ID=gene-VMS06_RS16895;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=VMS06_RS16895 NZ_JAVXZI010000015.1 Protein Homology CDS 127933 128292 . + 0 ID=cds-WP_000609653.1;Parent=gene-VMS06_RS16895;Dbxref=GenBank:WP_000609653.1;Name=WP_000609653.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313159.1;locus_tag=VMS06_RS16895;product=fumarate reductase subunit FrdD;protein_id=WP_000609653.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 128322 129197 . - . ID=gene-VMS06_RS16900;Name=ampR;gbkey=Gene;gene=ampR;gene_biotype=protein_coding;locus_tag=VMS06_RS16900 NZ_JAVXZI010000015.1 Protein Homology CDS 128322 129197 . - 0 ID=cds-WP_048965660.1;Parent=gene-VMS06_RS16900;Dbxref=GenBank:WP_048965660.1;Name=WP_048965660.1;gbkey=CDS;gene=ampR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882960.1;locus_tag=VMS06_RS16900;product=LysR family transcriptional regulator AmpR;protein_id=WP_048965660.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 129330 130475 . + . ID=gene-VMS06_RS16905;Name=blaACT;gbkey=Gene;gene=blaACT;gene_biotype=protein_coding;locus_tag=VMS06_RS16905 NZ_JAVXZI010000015.1 Protein Homology CDS 129330 130475 . + 0 ID=cds-WP_063148049.1;Parent=gene-VMS06_RS16905;Dbxref=GenBank:WP_063148049.1;Name=WP_063148049.1;Ontology_term=GO:0008800,GO:0030288;gbkey=CDS;gene=blaACT;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_045620946.1;locus_tag=VMS06_RS16905;product=ACT family cephalosporin-hydrolyzing class C beta-lactamase;protein_id=WP_063148049.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 130633 131163 . + . ID=gene-VMS06_RS16910;Name=VMS06_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16910 NZ_JAVXZI010000015.1 Protein Homology CDS 130633 131163 . + 0 ID=cds-WP_063148048.1;Parent=gene-VMS06_RS16910;Dbxref=GenBank:WP_063148048.1;Name=WP_063148048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830366.1;locus_tag=VMS06_RS16910;product=lipocalin family protein;protein_id=WP_063148048.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 131160 131477 . - . ID=gene-VMS06_RS16915;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=VMS06_RS16915 NZ_JAVXZI010000015.1 Protein Homology CDS 131160 131477 . - 0 ID=cds-WP_015572453.1;Parent=gene-VMS06_RS16915;Dbxref=GenBank:WP_015572453.1;Name=WP_015572453.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418572.4;locus_tag=VMS06_RS16915;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_015572453.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 131740 132339 . + . ID=gene-VMS06_RS16920;Name=VMS06_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16920 NZ_JAVXZI010000015.1 Protein Homology CDS 131740 132339 . + 0 ID=cds-WP_023299123.1;Parent=gene-VMS06_RS16920;Dbxref=GenBank:WP_023299123.1;Name=WP_023299123.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003855943.1;locus_tag=VMS06_RS16920;product=helix-turn-helix transcriptional regulator;protein_id=WP_023299123.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 132377 132523 . - . ID=gene-VMS06_RS16925;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=VMS06_RS16925 NZ_JAVXZI010000015.1 Protein Homology CDS 132377 132523 . - 0 ID=cds-WP_006178941.1;Parent=gene-VMS06_RS16925;Dbxref=GenBank:WP_006178941.1;Name=WP_006178941.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003855942.1;locus_tag=VMS06_RS16925;product=lipoprotein toxin entericidin B;protein_id=WP_006178941.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 132632 132763 . - . ID=gene-VMS06_RS16930;Name=VMS06_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16930 NZ_JAVXZI010000015.1 Protein Homology CDS 132632 132763 . - 0 ID=cds-WP_006810410.1;Parent=gene-VMS06_RS16930;Dbxref=GenBank:WP_006810410.1;Name=WP_006810410.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224693.1;locus_tag=VMS06_RS16930;product=entericidin A/B family lipoprotein;protein_id=WP_006810410.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 132821 133387 . - . ID=gene-VMS06_RS16935;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=VMS06_RS16935 NZ_JAVXZI010000015.1 Protein Homology CDS 132821 133387 . - 0 ID=cds-WP_003855940.1;Parent=gene-VMS06_RS16935;Dbxref=GenBank:WP_003855940.1;Name=WP_003855940.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=VMS06_RS16935;product=elongation factor P;protein_id=WP_003855940.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 133428 134456 . + . ID=gene-VMS06_RS16940;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=VMS06_RS16940 NZ_JAVXZI010000015.1 Protein Homology CDS 133428 134456 . + 0 ID=cds-WP_063148047.1;Parent=gene-VMS06_RS16940;Dbxref=GenBank:WP_063148047.1;Name=WP_063148047.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313154.1;locus_tag=VMS06_RS16940;product=EF-P beta-lysylation protein EpmB;protein_id=WP_063148047.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 134522 134875 . - . ID=gene-VMS06_RS16945;Name=VMS06_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16945 NZ_JAVXZI010000015.1 Protein Homology CDS 134522 134875 . - 0 ID=cds-WP_022646802.1;Parent=gene-VMS06_RS16945;Dbxref=GenBank:WP_022646802.1;Name=WP_022646802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224681.1;locus_tag=VMS06_RS16945;product=DUF4156 domain-containing protein;protein_id=WP_022646802.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 135110 135757 . + . ID=gene-VMS06_RS16950;Name=VMS06_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16950 NZ_JAVXZI010000015.1 Protein Homology CDS 135110 135757 . + 0 ID=cds-WP_038415111.1;Parent=gene-VMS06_RS16950;Dbxref=GenBank:WP_038415111.1;Name=WP_038415111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810413.1;locus_tag=VMS06_RS16950;product=nucleoside recognition domain-containing protein;protein_id=WP_038415111.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 135754 136215 . + . ID=gene-VMS06_RS16955;Name=VMS06_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16955 NZ_JAVXZI010000015.1 Protein Homology CDS 135754 136215 . + 0 ID=cds-WP_022646800.1;Parent=gene-VMS06_RS16955;Dbxref=GenBank:WP_022646800.1;Name=WP_022646800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003855935.1;locus_tag=VMS06_RS16955;product=YjiG family protein;protein_id=WP_022646800.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 136357 138003 . - . ID=gene-VMS06_RS16960;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=VMS06_RS16960 NZ_JAVXZI010000015.1 Protein Homology CDS 136357 138003 . - 0 ID=cds-WP_006810416.1;Parent=gene-VMS06_RS16960;Dbxref=GenBank:WP_006810416.1;Name=WP_006810416.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=VMS06_RS16960;product=chaperonin GroEL;protein_id=WP_006810416.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 138043 138336 . - . ID=gene-VMS06_RS16965;Name=VMS06_RS16965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16965 NZ_JAVXZI010000015.1 Protein Homology CDS 138043 138336 . - 0 ID=cds-WP_003855929.1;Parent=gene-VMS06_RS16965;Dbxref=GenBank:WP_003855929.1;Name=WP_003855929.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=VMS06_RS16965;product=co-chaperone GroES;protein_id=WP_003855929.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 138515 139762 . + . ID=gene-VMS06_RS16970;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=VMS06_RS16970 NZ_JAVXZI010000015.1 Protein Homology CDS 138515 139762 . + 0 ID=cds-WP_023299120.1;Parent=gene-VMS06_RS16970;Dbxref=GenBank:WP_023299120.1;Name=WP_023299120.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810417.1;locus_tag=VMS06_RS16970;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_023299120.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 139786 140250 . - . ID=gene-VMS06_RS16975;Name=VMS06_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16975 NZ_JAVXZI010000015.1 Protein Homology CDS 139786 140250 . - 0 ID=cds-WP_003855925.1;Parent=gene-VMS06_RS16975;Dbxref=GenBank:WP_003855925.1;Name=WP_003855925.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882967.1;locus_tag=VMS06_RS16975;product=FxsA family protein;protein_id=WP_003855925.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 140586 142022 . + . ID=gene-VMS06_RS16980;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=VMS06_RS16980 NZ_JAVXZI010000015.1 Protein Homology CDS 140586 142022 . + 0 ID=cds-WP_063148046.1;Parent=gene-VMS06_RS16980;Dbxref=GenBank:WP_063148046.1;Name=WP_063148046.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224674.1;locus_tag=VMS06_RS16980;product=aspartate ammonia-lyase;protein_id=WP_063148046.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 142139 143440 . + . ID=gene-VMS06_RS16985;Name=VMS06_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16985 NZ_JAVXZI010000015.1 Protein Homology CDS 142139 143440 . + 0 ID=cds-WP_008502949.1;Parent=gene-VMS06_RS16985;Dbxref=GenBank:WP_008502949.1;Name=WP_008502949.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224673.1;locus_tag=VMS06_RS16985;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_008502949.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 143554 143877 . + . ID=gene-VMS06_RS16990;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=VMS06_RS16990 NZ_JAVXZI010000015.1 Protein Homology CDS 143554 143877 . + 0 ID=cds-WP_063148045.1;Parent=gene-VMS06_RS16990;Dbxref=GenBank:WP_063148045.1;Name=WP_063148045.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224672.1;locus_tag=VMS06_RS16990;product=divalent cation tolerance protein CutA;protein_id=WP_063148045.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 143853 145556 . + . ID=gene-VMS06_RS16995;Name=VMS06_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS16995 NZ_JAVXZI010000015.1 Protein Homology CDS 143853 145556 . + 0 ID=cds-WP_045620950.1;Parent=gene-VMS06_RS16995;Dbxref=GenBank:WP_045620950.1;Name=WP_045620950.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463187.1;locus_tag=VMS06_RS16995;product=protein-disulfide reductase DsbD;protein_id=WP_045620950.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 145606 146181 . + . ID=gene-VMS06_RS17000;Name=VMS06_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17000 NZ_JAVXZI010000015.1 Protein Homology CDS 145606 146181 . + 0 ID=cds-WP_022646797.1;Parent=gene-VMS06_RS17000;Dbxref=GenBank:WP_022646797.1;Name=WP_022646797.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710000.1;locus_tag=VMS06_RS17000;product=transcriptional regulator;protein_id=WP_022646797.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 146178 146768 . - . ID=gene-VMS06_RS17005;Name=VMS06_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17005 NZ_JAVXZI010000015.1 Protein Homology CDS 146178 146768 . - 0 ID=cds-WP_023299118.1;Parent=gene-VMS06_RS17005;Dbxref=GenBank:WP_023299118.1;Name=WP_023299118.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383973.1;locus_tag=VMS06_RS17005;product=LysE family translocator;protein_id=WP_023299118.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 146804 147649 . - . ID=gene-VMS06_RS17010;Name=VMS06_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17010 NZ_JAVXZI010000015.1 Protein Homology CDS 146804 147649 . - 0 ID=cds-WP_023299117.1;Parent=gene-VMS06_RS17010;Dbxref=GenBank:WP_023299117.1;Name=WP_023299117.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810422.1;locus_tag=VMS06_RS17010;product=AraC family transcriptional regulator;protein_id=WP_023299117.1;transl_table=11 NZ_JAVXZI010000015.1 RefSeq gene 147819 147894 . + . ID=gene-VMS06_RS17015;Name=VMS06_RS17015;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS17015 NZ_JAVXZI010000015.1 tRNAscan-SE tRNA 147819 147894 . + . ID=rna-VMS06_RS17015;Parent=gene-VMS06_RS17015;anticodon=(pos:147852..147854);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS17015;product=tRNA-Phe NZ_JAVXZI010000015.1 tRNAscan-SE exon 147819 147894 . + . ID=exon-VMS06_RS17015-1;Parent=rna-VMS06_RS17015;anticodon=(pos:147852..147854);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS17015;product=tRNA-Phe NZ_JAVXZI010000015.1 RefSeq gene 148139 148244 . - . ID=gene-VMS06_RS17020;Name=rrf;end_range=148244,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VMS06_RS17020;partial=true NZ_JAVXZI010000015.1 cmsearch rRNA 148139 148244 . - . ID=rna-VMS06_RS17020;Parent=gene-VMS06_RS17020;Dbxref=RFAM:RF00001;end_range=148244,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS17020;partial=true;product=5S ribosomal RNA NZ_JAVXZI010000015.1 cmsearch exon 148139 148244 . - . ID=exon-VMS06_RS17020-1;Parent=rna-VMS06_RS17020;Dbxref=RFAM:RF00001;end_range=148244,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS17020;partial=true;product=5S ribosomal RNA ##sequence-region NZ_JAVXZI010000016.1 1 138141 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000016.1 RefSeq region 1 138141 . + . ID=NZ_JAVXZI010000016.1:1..138141;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000016.1 RefSeq gene 663 1466 . + . ID=gene-VMS06_RS17025;Name=VMS06_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17025 NZ_JAVXZI010000016.1 Protein Homology CDS 663 1466 . + 0 ID=cds-WP_063843832.1;Parent=gene-VMS06_RS17025;Dbxref=GenBank:WP_063843832.1;Name=WP_063843832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694274.1;locus_tag=VMS06_RS17025;product=DUF4225 domain-containing protein;protein_id=WP_063843832.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 1441 1770 . - . ID=gene-VMS06_RS17030;Name=VMS06_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17030 NZ_JAVXZI010000016.1 Protein Homology CDS 1441 1770 . - 0 ID=cds-WP_023306210.1;Parent=gene-VMS06_RS17030;Dbxref=GenBank:WP_023306210.1;Name=WP_023306210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694273.1;locus_tag=VMS06_RS17030;product=hypothetical protein;protein_id=WP_023306210.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 1903 2472 . + . ID=gene-VMS06_RS17035;Name=VMS06_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17035 NZ_JAVXZI010000016.1 Protein Homology CDS 1903 2472 . + 0 ID=cds-WP_063843831.1;Parent=gene-VMS06_RS17035;Dbxref=GenBank:WP_063843831.1;Name=WP_063843831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431214.1;locus_tag=VMS06_RS17035;product=hypothetical protein;protein_id=WP_063843831.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 2498 2983 . - . ID=gene-VMS06_RS17040;Name=VMS06_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17040 NZ_JAVXZI010000016.1 Protein Homology CDS 2498 2983 . - 0 ID=cds-WP_063139083.1;Parent=gene-VMS06_RS17040;Dbxref=GenBank:WP_063139083.1;Name=WP_063139083.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462552.1;locus_tag=VMS06_RS17040;product=GNAT family N-acetyltransferase;protein_id=WP_063139083.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 2971 3237 . - . ID=gene-VMS06_RS17045;Name=VMS06_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17045 NZ_JAVXZI010000016.1 Protein Homology CDS 2971 3237 . - 0 ID=cds-WP_046621516.1;Parent=gene-VMS06_RS17045;Dbxref=GenBank:WP_046621516.1;Name=WP_046621516.1;Ontology_term=GO:0006355,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213599.1;locus_tag=VMS06_RS17045;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_046621516.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 3301 4230 . - . ID=gene-VMS06_RS17050;Name=VMS06_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17050 NZ_JAVXZI010000016.1 Protein Homology CDS 3301 4230 . - 0 ID=cds-WP_063147319.1;Parent=gene-VMS06_RS17050;Dbxref=GenBank:WP_063147319.1;Name=WP_063147319.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228681.1;locus_tag=VMS06_RS17050;product=LysR family transcriptional regulator;protein_id=WP_063147319.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 4360 5748 . + . ID=gene-VMS06_RS17055;Name=VMS06_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17055 NZ_JAVXZI010000016.1 Protein Homology CDS 4360 5748 . + 0 ID=cds-WP_063147318.1;Parent=gene-VMS06_RS17055;Dbxref=GenBank:WP_063147318.1;Name=WP_063147318.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228682.1;locus_tag=VMS06_RS17055;product=MFS transporter;protein_id=WP_063147318.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 5727 6284 . - . ID=gene-VMS06_RS17060;Name=VMS06_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17060 NZ_JAVXZI010000016.1 GeneMarkS-2+ CDS 5727 6284 . - 0 ID=cds-WP_023300131.1;Parent=gene-VMS06_RS17060;Dbxref=GenBank:WP_023300131.1;Name=WP_023300131.1;Ontology_term=GO:0051082,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=unfolded protein binding|0051082||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS17060;product=OmpH family outer membrane protein;protein_id=WP_023300131.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 6405 7541 . - . ID=gene-VMS06_RS17065;Name=VMS06_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17065 NZ_JAVXZI010000016.1 Protein Homology CDS 6405 7541 . - 0 ID=cds-WP_063147317.1;Parent=gene-VMS06_RS17065;Dbxref=GenBank:WP_063147317.1;Name=WP_063147317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703282.1;locus_tag=VMS06_RS17065;product=type 1 fimbrial protein;protein_id=WP_063147317.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 7565 8143 . - . ID=gene-VMS06_RS17070;Name=VMS06_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17070 NZ_JAVXZI010000016.1 Protein Homology CDS 7565 8143 . - 0 ID=cds-WP_022648146.1;Parent=gene-VMS06_RS17070;Dbxref=GenBank:WP_022648146.1;Name=WP_022648146.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078081.1;locus_tag=VMS06_RS17070;product=fimbrial protein;protein_id=WP_022648146.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 8143 10725 . - . ID=gene-VMS06_RS17075;Name=VMS06_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17075 NZ_JAVXZI010000016.1 Protein Homology CDS 8143 10725 . - 0 ID=cds-WP_063843830.1;Parent=gene-VMS06_RS17075;Dbxref=GenBank:WP_063843830.1;Name=WP_063843830.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703285.1;locus_tag=VMS06_RS17075;product=fimbria/pilus outer membrane usher protein;protein_id=WP_063843830.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 10764 11447 . - . ID=gene-VMS06_RS17080;Name=VMS06_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17080 NZ_JAVXZI010000016.1 Protein Homology CDS 10764 11447 . - 0 ID=cds-WP_046621508.1;Parent=gene-VMS06_RS17080;Dbxref=GenBank:WP_046621508.1;Name=WP_046621508.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703286.1;locus_tag=VMS06_RS17080;product=fimbria/pilus periplasmic chaperone;protein_id=WP_046621508.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 11492 12019 . - . ID=gene-VMS06_RS17085;Name=VMS06_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17085 NZ_JAVXZI010000016.1 Protein Homology CDS 11492 12019 . - 0 ID=cds-WP_022648149.1;Parent=gene-VMS06_RS17085;Dbxref=GenBank:WP_022648149.1;Name=WP_022648149.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703287.1;locus_tag=VMS06_RS17085;product=fimbrial protein;protein_id=WP_022648149.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 12387 12998 . + . ID=gene-VMS06_RS17090;Name=VMS06_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17090 NZ_JAVXZI010000016.1 Protein Homology CDS 12387 12998 . + 0 ID=cds-WP_022648150.1;Parent=gene-VMS06_RS17090;Dbxref=GenBank:WP_022648150.1;Name=WP_022648150.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013196138.1;locus_tag=VMS06_RS17090;product=fimbrial protein;protein_id=WP_022648150.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 13058 13726 . + . ID=gene-VMS06_RS17095;Name=VMS06_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17095 NZ_JAVXZI010000016.1 Protein Homology CDS 13058 13726 . + 0 ID=cds-WP_063147315.1;Parent=gene-VMS06_RS17095;Dbxref=GenBank:WP_063147315.1;Name=WP_063147315.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205730.1;locus_tag=VMS06_RS17095;product=fimbrial biogenesis chaperone;protein_id=WP_063147315.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 13771 16275 . + . ID=gene-VMS06_RS17100;Name=VMS06_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17100 NZ_JAVXZI010000016.1 Protein Homology CDS 13771 16275 . + 0 ID=cds-WP_226856286.1;Parent=gene-VMS06_RS17100;Dbxref=GenBank:WP_226856286.1;Name=WP_226856286.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015963330.1;locus_tag=VMS06_RS17100;product=fimbria/pilus outer membrane usher protein;protein_id=WP_226856286.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 16291 17364 . + . ID=gene-VMS06_RS17105;Name=VMS06_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17105 NZ_JAVXZI010000016.1 Protein Homology CDS 16291 17364 . + 0 ID=cds-WP_063147314.1;Parent=gene-VMS06_RS17105;Dbxref=GenBank:WP_063147314.1;Name=WP_063147314.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.7;locus_tag=VMS06_RS17105;product=fimbrial protein;protein_id=WP_063147314.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 17368 18363 . - . ID=gene-VMS06_RS17110;Name=VMS06_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17110 NZ_JAVXZI010000016.1 Protein Homology CDS 17368 18363 . - 0 ID=cds-WP_063147313.1;Parent=gene-VMS06_RS17110;Dbxref=GenBank:WP_063147313.1;Name=WP_063147313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570513.1;locus_tag=VMS06_RS17110;product=DUF2891 domain-containing protein;protein_id=WP_063147313.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 18373 19359 . - . ID=gene-VMS06_RS17115;Name=VMS06_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17115 NZ_JAVXZI010000016.1 Protein Homology CDS 18373 19359 . - 0 ID=cds-WP_038416071.1;Parent=gene-VMS06_RS17115;Dbxref=GenBank:WP_038416071.1;Name=WP_038416071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382341.1;locus_tag=VMS06_RS17115;product=DUF979 domain-containing protein;protein_id=WP_038416071.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 19356 20078 . - . ID=gene-VMS06_RS17120;Name=VMS06_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17120 NZ_JAVXZI010000016.1 Protein Homology CDS 19356 20078 . - 0 ID=cds-WP_063147312.1;Parent=gene-VMS06_RS17120;Dbxref=GenBank:WP_063147312.1;Name=WP_063147312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006175309.1;locus_tag=VMS06_RS17120;product=DUF969 domain-containing protein;protein_id=WP_063147312.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 20303 20851 . + . ID=gene-VMS06_RS17125;Name=VMS06_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17125 NZ_JAVXZI010000016.1 Protein Homology CDS 20303 20851 . + 0 ID=cds-WP_022648157.1;Parent=gene-VMS06_RS17125;Dbxref=GenBank:WP_022648157.1;Name=WP_022648157.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382340.1;locus_tag=VMS06_RS17125;product=winged helix DNA-binding protein;protein_id=WP_022648157.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 20848 22923 . - . ID=gene-VMS06_RS17130;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=VMS06_RS17130 NZ_JAVXZI010000016.1 Protein Homology CDS 20848 22923 . - 0 ID=cds-WP_022648158.1;Parent=gene-VMS06_RS17130;Dbxref=GenBank:WP_022648158.1;Name=WP_022648158.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884121.1;locus_tag=VMS06_RS17130;product=glycogen debranching protein GlgX;protein_id=WP_022648158.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 22939 25407 . - . ID=gene-VMS06_RS17135;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=VMS06_RS17135 NZ_JAVXZI010000016.1 Protein Homology CDS 22939 25407 . - 0 ID=cds-WP_063147311.1;Parent=gene-VMS06_RS17135;Dbxref=GenBank:WP_063147311.1;Name=WP_063147311.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883869.1;locus_tag=VMS06_RS17135;product=malto-oligosyltrehalose synthase;protein_id=WP_063147311.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 25404 27191 . - . ID=gene-VMS06_RS17140;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=VMS06_RS17140 NZ_JAVXZI010000016.1 Protein Homology CDS 25404 27191 . - 0 ID=cds-WP_063147310.1;Parent=gene-VMS06_RS17140;Dbxref=GenBank:WP_063147310.1;Name=WP_063147310.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382337.1;locus_tag=VMS06_RS17140;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_063147310.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 27323 27850 . + . ID=gene-VMS06_RS17145;Name=VMS06_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17145 NZ_JAVXZI010000016.1 Protein Homology CDS 27323 27850 . + 0 ID=cds-WP_022648161.1;Parent=gene-VMS06_RS17145;Dbxref=GenBank:WP_022648161.1;Name=WP_022648161.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000548096.1;locus_tag=VMS06_RS17145;product=GNAT family N-acetyltransferase;protein_id=WP_022648161.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 27962 28846 . + . ID=gene-VMS06_RS17150;Name=VMS06_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17150 NZ_JAVXZI010000016.1 Protein Homology CDS 27962 28846 . + 0 ID=cds-WP_022648162.1;Parent=gene-VMS06_RS17150;Dbxref=GenBank:WP_022648162.1;Name=WP_022648162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015700264.1;locus_tag=VMS06_RS17150;product=SDR family oxidoreductase;protein_id=WP_022648162.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 28954 29931 . + . ID=gene-VMS06_RS17155;Name=VMS06_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17155 NZ_JAVXZI010000016.1 Protein Homology CDS 28954 29931 . + 0 ID=cds-WP_063147309.1;Parent=gene-VMS06_RS17155;Dbxref=GenBank:WP_063147309.1;Name=WP_063147309.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382334.1;locus_tag=VMS06_RS17155;product=MBL fold metallo-hydrolase;protein_id=WP_063147309.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 29933 30841 . + . ID=gene-VMS06_RS17160;Name=VMS06_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17160 NZ_JAVXZI010000016.1 Protein Homology CDS 29933 30841 . + 0 ID=cds-WP_022648164.1;Parent=gene-VMS06_RS17160;Dbxref=GenBank:WP_022648164.1;Name=WP_022648164.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884115.1;locus_tag=VMS06_RS17160;product=LysR family transcriptional regulator;protein_id=WP_022648164.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 30832 31716 . - . ID=gene-VMS06_RS17165;Name=VMS06_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17165 NZ_JAVXZI010000016.1 Protein Homology CDS 30832 31716 . - 0 ID=cds-WP_063147308.1;Parent=gene-VMS06_RS17165;Dbxref=GenBank:WP_063147308.1;Name=WP_063147308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693405.1;locus_tag=VMS06_RS17165;product=LysR substrate-binding domain-containing protein;protein_id=WP_063147308.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 31828 33309 . + . ID=gene-VMS06_RS17170;Name=VMS06_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17170 NZ_JAVXZI010000016.1 Protein Homology CDS 31828 33309 . + 0 ID=cds-WP_063147307.1;Parent=gene-VMS06_RS17170;Dbxref=GenBank:WP_063147307.1;Name=WP_063147307.1;Ontology_term=GO:0010181,GO:0016831,GO:0046872;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382330.1;locus_tag=VMS06_RS17170;product=UbiD family decarboxylase;protein_id=WP_063147307.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 33439 33726 . + . ID=gene-VMS06_RS17175;Name=VMS06_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17175 NZ_JAVXZI010000016.1 Protein Homology CDS 33439 33726 . + 0 ID=cds-WP_022648167.1;Parent=gene-VMS06_RS17175;Dbxref=GenBank:WP_022648167.1;Name=WP_022648167.1;Ontology_term=GO:0003677,GO:0003690;gbkey=CDS;go_function=DNA binding|0003677||IEA,double-stranded DNA binding|0003690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000123965.1;locus_tag=VMS06_RS17175;product=VF530 family protein;protein_id=WP_022648167.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 33734 35023 . + . ID=gene-VMS06_RS17180;Name=VMS06_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17180 NZ_JAVXZI010000016.1 Protein Homology CDS 33734 35023 . + 0 ID=cds-WP_063147306.1;Parent=gene-VMS06_RS17180;Dbxref=GenBank:WP_063147306.1;Name=WP_063147306.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501680.1;locus_tag=VMS06_RS17180;product=glycoside hydrolase family 10-like protein;protein_id=WP_063147306.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 35061 35837 . - . ID=gene-VMS06_RS17185;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=VMS06_RS17185 NZ_JAVXZI010000016.1 Protein Homology CDS 35061 35837 . - 0 ID=cds-WP_063147305.1;Parent=gene-VMS06_RS17185;Dbxref=GenBank:WP_063147305.1;Name=WP_063147305.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382328.1;locus_tag=VMS06_RS17185;product=thiol:disulfide interchange protein DsbG;protein_id=WP_063147305.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 35879 36436 . - . ID=gene-VMS06_RS17190;Name=VMS06_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17190 NZ_JAVXZI010000016.1 Protein Homology CDS 35879 36436 . - 0 ID=cds-WP_180240181.1;Parent=gene-VMS06_RS17190;Dbxref=GenBank:WP_180240181.1;Name=WP_180240181.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810680.1;locus_tag=VMS06_RS17190;product=RNA polymerase sigma factor;protein_id=WP_180240181.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 36442 36855 . - . ID=gene-VMS06_RS17195;Name=VMS06_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17195 NZ_JAVXZI010000016.1 Protein Homology CDS 36442 36855 . - 0 ID=cds-WP_022648171.1;Parent=gene-VMS06_RS17195;Dbxref=GenBank:WP_022648171.1;Name=WP_022648171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810681.1;locus_tag=VMS06_RS17195;product=hypothetical protein;protein_id=WP_022648171.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 37047 38597 . - . ID=gene-VMS06_RS17200;Name=VMS06_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17200 NZ_JAVXZI010000016.1 Protein Homology CDS 37047 38597 . - 0 ID=cds-WP_063147304.1;Parent=gene-VMS06_RS17200;Dbxref=GenBank:WP_063147304.1;Name=WP_063147304.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693401.1;locus_tag=VMS06_RS17200;product=methyl-accepting chemotaxis protein;protein_id=WP_063147304.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 38693 39709 . - . ID=gene-VMS06_RS17205;Name=VMS06_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17205 NZ_JAVXZI010000016.1 Protein Homology CDS 38693 39709 . - 0 ID=cds-WP_017693400.1;Parent=gene-VMS06_RS17205;Dbxref=GenBank:WP_017693400.1;Name=WP_017693400.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857087.1;locus_tag=VMS06_RS17205;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_017693400.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 39738 41144 . - . ID=gene-VMS06_RS17210;Name=VMS06_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17210 NZ_JAVXZI010000016.1 Protein Homology CDS 39738 41144 . - 0 ID=cds-WP_063147303.1;Parent=gene-VMS06_RS17210;Dbxref=GenBank:WP_063147303.1;Name=WP_063147303.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831989.1;locus_tag=VMS06_RS17210;product=sucrose-6-phosphate hydrolase;protein_id=WP_063147303.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 41144 42514 . - . ID=gene-VMS06_RS17215;Name=VMS06_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17215 NZ_JAVXZI010000016.1 Protein Homology CDS 41144 42514 . - 0 ID=cds-WP_063147302.1;Parent=gene-VMS06_RS17215;Dbxref=GenBank:WP_063147302.1;Name=WP_063147302.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225625.1;locus_tag=VMS06_RS17215;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_063147302.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 42581 44098 . - . ID=gene-VMS06_RS17220;Name=VMS06_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17220 NZ_JAVXZI010000016.1 Protein Homology CDS 42581 44098 . - 0 ID=cds-WP_063147301.1;Parent=gene-VMS06_RS17220;Dbxref=GenBank:WP_063147301.1;Name=WP_063147301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225626.1;locus_tag=VMS06_RS17220;product=carbohydrate porin;protein_id=WP_063147301.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 44270 45166 . - . ID=gene-VMS06_RS17225;Name=VMS06_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17225 NZ_JAVXZI010000016.1 Protein Homology CDS 44270 45166 . - 0 ID=cds-WP_063147300.1;Parent=gene-VMS06_RS17225;Dbxref=GenBank:WP_063147300.1;Name=WP_063147300.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693397.1;locus_tag=VMS06_RS17225;product=aminoimidazole riboside kinase;protein_id=WP_063147300.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 45255 46466 . - . ID=gene-VMS06_RS17230;Name=VMS06_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17230 NZ_JAVXZI010000016.1 Protein Homology CDS 45255 46466 . - 0 ID=cds-WP_063147299.1;Parent=gene-VMS06_RS17230;Dbxref=GenBank:WP_063147299.1;Name=WP_063147299.1;Ontology_term=GO:0007165,GO:0071111,GO:0071949;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA,FAD binding|0071949||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382320.1;locus_tag=VMS06_RS17230;product=diguanylate phosphodiesterase;protein_id=WP_063147299.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 46533 48029 . - . ID=gene-VMS06_RS17235;Name=VMS06_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17235 NZ_JAVXZI010000016.1 Protein Homology CDS 46533 48029 . - 0 ID=cds-WP_063147298.1;Parent=gene-VMS06_RS17235;Dbxref=GenBank:WP_063147298.1;Name=WP_063147298.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070325.1;locus_tag=VMS06_RS17235;product=alpha/beta hydrolase;protein_id=WP_063147298.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 48297 49151 . + . ID=gene-VMS06_RS17240;Name=VMS06_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17240 NZ_JAVXZI010000016.1 Protein Homology CDS 48297 49151 . + 0 ID=cds-WP_063147297.1;Parent=gene-VMS06_RS17240;Dbxref=GenBank:WP_063147297.1;Name=WP_063147297.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000208714.1;locus_tag=VMS06_RS17240;product=MurR/RpiR family transcriptional regulator;protein_id=WP_063147297.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 49164 49736 . + . ID=gene-VMS06_RS17245;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=VMS06_RS17245 NZ_JAVXZI010000016.1 Protein Homology CDS 49164 49736 . + 0 ID=cds-WP_022648182.1;Parent=gene-VMS06_RS17245;Dbxref=GenBank:WP_022648182.1;Name=WP_022648182.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001113749.1;locus_tag=VMS06_RS17245;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_022648182.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 49752 51284 . + . ID=gene-VMS06_RS17250;Name=VMS06_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17250 NZ_JAVXZI010000016.1 Protein Homology CDS 49752 51284 . + 0 ID=cds-WP_323630683.1;Parent=gene-VMS06_RS17250;Dbxref=GenBank:WP_323630683.1;Name=WP_323630683.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000858966.1;locus_tag=VMS06_RS17250;product=ABC transporter substrate-binding protein;protein_id=WP_323630683.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 51308 52330 . + . ID=gene-VMS06_RS17255;Name=VMS06_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17255 NZ_JAVXZI010000016.1 Protein Homology CDS 51308 52330 . + 0 ID=cds-WP_003857077.1;Parent=gene-VMS06_RS17255;Dbxref=GenBank:WP_003857077.1;Name=WP_003857077.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416003.1;locus_tag=VMS06_RS17255;product=ABC transporter permease;protein_id=WP_003857077.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 52327 53223 . + . ID=gene-VMS06_RS17260;Name=ddpC;gbkey=Gene;gene=ddpC;gene_biotype=protein_coding;locus_tag=VMS06_RS17260 NZ_JAVXZI010000016.1 Protein Homology CDS 52327 53223 . + 0 ID=cds-WP_022648185.1;Parent=gene-VMS06_RS17260;Dbxref=GenBank:WP_022648185.1;Name=WP_022648185.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ddpC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310116.1;locus_tag=VMS06_RS17260;product=D%2CD-dipeptide ABC transporter permease;protein_id=WP_022648185.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 53220 54206 . + . ID=gene-VMS06_RS17265;Name=VMS06_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17265 NZ_JAVXZI010000016.1 Protein Homology CDS 53220 54206 . + 0 ID=cds-WP_063137770.1;Parent=gene-VMS06_RS17265;Dbxref=GenBank:WP_063137770.1;Name=WP_063137770.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884089.1;locus_tag=VMS06_RS17265;product=ABC transporter ATP-binding protein;protein_id=WP_063137770.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 54199 55125 . + . ID=gene-VMS06_RS17270;Name=VMS06_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17270 NZ_JAVXZI010000016.1 Protein Homology CDS 54199 55125 . + 0 ID=cds-WP_063843826.1;Parent=gene-VMS06_RS17270;Dbxref=GenBank:WP_063843826.1;Name=WP_063843826.1;Ontology_term=GO:0015833,GO:0005524,GO:0015440,GO:0009898,GO:0043190;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type peptide transporter activity|0015440||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857074.1;locus_tag=VMS06_RS17270;product=oligopeptide/dipeptide ABC transporter ATP-binding protein;protein_id=WP_063843826.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 55156 55584 . - . ID=gene-VMS06_RS17275;Name=VMS06_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17275 NZ_JAVXZI010000016.1 Protein Homology CDS 55156 55584 . - 0 ID=cds-WP_003857069.1;Parent=gene-VMS06_RS17275;Dbxref=GenBank:WP_003857069.1;Name=WP_003857069.1;Ontology_term=GO:0006972,GO:0006979,GO:0033194,GO:0004601,GO:0051920,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=peroxidase activity|0004601||IEA,peroxiredoxin activity|0051920||IEA;go_process=hyperosmotic response|0006972||IEA,response to oxidative stress|0006979||IEA,response to hydroperoxide|0033194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096537.1;locus_tag=VMS06_RS17275;product=OsmC family protein;protein_id=WP_003857069.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 55654 56541 . - . ID=gene-VMS06_RS17280;Name=VMS06_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17280 NZ_JAVXZI010000016.1 Protein Homology CDS 55654 56541 . - 0 ID=cds-WP_074136308.1;Parent=gene-VMS06_RS17280;Dbxref=GenBank:WP_074136308.1;Name=WP_074136308.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857067.1;locus_tag=VMS06_RS17280;product=LysR family transcriptional regulator;protein_id=WP_074136308.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 56653 57504 . + . ID=gene-VMS06_RS17285;Name=VMS06_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17285 NZ_JAVXZI010000016.1 Protein Homology CDS 56653 57504 . + 0 ID=cds-WP_063147293.1;Parent=gene-VMS06_RS17285;Dbxref=GenBank:WP_063147293.1;Name=WP_063147293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151241.1;locus_tag=VMS06_RS17285;product=Vmh family MBL fold metallo-hydrolase;protein_id=WP_063147293.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 57556 58077 . + . ID=gene-VMS06_RS17290;Name=VMS06_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17290 NZ_JAVXZI010000016.1 Protein Homology CDS 57556 58077 . + 0 ID=cds-WP_063147292.1;Parent=gene-VMS06_RS17290;Dbxref=GenBank:WP_063147292.1;Name=WP_063147292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857065.1;locus_tag=VMS06_RS17290;product=VOC family protein;protein_id=WP_063147292.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 58219 58434 . + . ID=gene-VMS06_RS17295;Name=bdm;gbkey=Gene;gene=bdm;gene_biotype=protein_coding;locus_tag=VMS06_RS17295 NZ_JAVXZI010000016.1 Protein Homology CDS 58219 58434 . + 0 ID=cds-WP_022648192.1;Parent=gene-VMS06_RS17295;Dbxref=GenBank:WP_022648192.1;Name=WP_022648192.1;gbkey=CDS;gene=bdm;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310112.2;locus_tag=VMS06_RS17295;product=biofilm-dependent modulation protein;protein_id=WP_022648192.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 58530 58667 . + . ID=gene-VMS06_RS17300;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=VMS06_RS17300 NZ_JAVXZI010000016.1 Protein Homology CDS 58530 58667 . + 0 ID=cds-WP_023300167.1;Parent=gene-VMS06_RS17300;Dbxref=GenBank:WP_023300167.1;Name=WP_023300167.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096533.1;locus_tag=VMS06_RS17300;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_023300167.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 58844 60541 . + . ID=gene-VMS06_RS17305;Name=VMS06_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17305 NZ_JAVXZI010000016.1 Protein Homology CDS 58844 60541 . + 0 ID=cds-WP_022648194.1;Parent=gene-VMS06_RS17305;Dbxref=GenBank:WP_022648194.1;Name=WP_022648194.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707611.2;locus_tag=VMS06_RS17305;product=NAD-dependent malic enzyme;protein_id=WP_022648194.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 60843 61328 . + . ID=gene-VMS06_RS17310;Name=VMS06_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17310 NZ_JAVXZI010000016.1 Protein Homology CDS 60843 61328 . + 0 ID=cds-WP_063147291.1;Parent=gene-VMS06_RS17310;Dbxref=GenBank:WP_063147291.1;Name=WP_063147291.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500392.1;locus_tag=VMS06_RS17310;product=Hcp family type VI secretion system effector;protein_id=WP_063147291.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 61325 61807 . + . ID=gene-VMS06_RS17315;Name=VMS06_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17315 NZ_JAVXZI010000016.1 Protein Homology CDS 61325 61807 . + 0 ID=cds-WP_063147290.1;Parent=gene-VMS06_RS17315;Dbxref=GenBank:WP_063147290.1;Name=WP_063147290.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022362.7;locus_tag=VMS06_RS17315;product=DUF2778 domain-containing protein;protein_id=WP_063147290.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 62394 64103 . + . ID=gene-VMS06_RS17320;Name=VMS06_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17320 NZ_JAVXZI010000016.1 Protein Homology CDS 62394 64103 . + 0 ID=cds-WP_063147289.1;Parent=gene-VMS06_RS17320;Dbxref=GenBank:WP_063147289.1;Name=WP_063147289.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096531.1;locus_tag=VMS06_RS17320;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_063147289.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 64309 65319 . + . ID=gene-VMS06_RS17325;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=VMS06_RS17325 NZ_JAVXZI010000016.1 Protein Homology CDS 64309 65319 . + 0 ID=cds-WP_022648199.1;Parent=gene-VMS06_RS17325;Dbxref=GenBank:WP_022648199.1;Name=WP_022648199.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227123.1;locus_tag=VMS06_RS17325;product=alcohol dehydrogenase AdhP;protein_id=WP_022648199.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 65359 65868 . - . ID=gene-VMS06_RS17330;Name=VMS06_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17330 NZ_JAVXZI010000016.1 Protein Homology CDS 65359 65868 . - 0 ID=cds-WP_038416099.1;Parent=gene-VMS06_RS17330;Dbxref=GenBank:WP_038416099.1;Name=WP_038416099.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570482.1;locus_tag=VMS06_RS17330;product=RrF2 family transcriptional regulator;protein_id=WP_038416099.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 65999 67201 . + . ID=gene-VMS06_RS17335;Name=VMS06_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17335 NZ_JAVXZI010000016.1 Protein Homology CDS 65999 67201 . + 0 ID=cds-WP_063147288.1;Parent=gene-VMS06_RS17335;Dbxref=GenBank:WP_063147288.1;Name=WP_063147288.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857054.1;locus_tag=VMS06_RS17335;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_063147288.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 67241 68416 . - . ID=gene-VMS06_RS17340;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=VMS06_RS17340 NZ_JAVXZI010000016.1 Protein Homology CDS 67241 68416 . - 0 ID=cds-WP_023306256.1;Parent=gene-VMS06_RS17340;Dbxref=GenBank:WP_023306256.1;Name=WP_023306256.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006175361.1;locus_tag=VMS06_RS17340;product=MFS transporter AraJ;protein_id=WP_023306256.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 68578 69396 . + . ID=gene-VMS06_RS17345;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=VMS06_RS17345 NZ_JAVXZI010000016.1 Protein Homology CDS 68578 69396 . + 0 ID=cds-WP_022648203.1;Parent=gene-VMS06_RS17345;Dbxref=GenBank:WP_022648203.1;Name=WP_022648203.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884060.1;locus_tag=VMS06_RS17345;product=polyphosphate kinase 2;protein_id=WP_022648203.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 69456 70112 . - . ID=gene-VMS06_RS17350;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=VMS06_RS17350 NZ_JAVXZI010000016.1 Protein Homology CDS 69456 70112 . - 0 ID=cds-WP_023300174.1;Parent=gene-VMS06_RS17350;Dbxref=GenBank:WP_023300174.1;Name=WP_023300174.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227134.1;locus_tag=VMS06_RS17350;product=formate dehydrogenase-N subunit gamma;protein_id=WP_023300174.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 70105 70989 . - . ID=gene-VMS06_RS17355;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=VMS06_RS17355 NZ_JAVXZI010000016.1 Protein Homology CDS 70105 70989 . - 0 ID=cds-WP_003857048.1;Parent=gene-VMS06_RS17355;Dbxref=GenBank:WP_003857048.1;Name=WP_003857048.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227135.1;locus_tag=VMS06_RS17355;product=formate dehydrogenase subunit beta;protein_id=WP_003857048.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 71001 74048 . - . ID=gene-VMS06_RS17360;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=VMS06_RS17360 NZ_JAVXZI010000016.1 Protein Homology CDS 71001 74048 . - 0 ID=cds-WP_100148801.1;Parent=gene-VMS06_RS17360;Dbxref=GenBank:WP_100148801.1;Name=WP_100148801.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310105.1;locus_tag=VMS06_RS17360;product=formate dehydrogenase-N subunit alpha;protein_id=WP_100148801.1;transl_except=(pos:complement(73461..73463)%2Caa:Sec);transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 74269 75144 . + . ID=gene-VMS06_RS17365;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=VMS06_RS17365 NZ_JAVXZI010000016.1 Protein Homology CDS 74269 75144 . + 0 ID=cds-WP_022648206.1;Parent=gene-VMS06_RS17365;Dbxref=GenBank:WP_022648206.1;Name=WP_022648206.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yddG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382301.1;locus_tag=VMS06_RS17365;product=aromatic amino acid DMT transporter YddG;protein_id=WP_022648206.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 75772 76845 . + . ID=gene-VMS06_RS17370;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=VMS06_RS17370 NZ_JAVXZI010000016.1 Protein Homology CDS 75772 76845 . + 0 ID=cds-WP_063147286.1;Parent=gene-VMS06_RS17370;Dbxref=GenBank:WP_063147286.1;Name=WP_063147286.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460531.1;locus_tag=VMS06_RS17370;product=porin OmpC;protein_id=WP_063147286.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 76890 78380 . - . ID=gene-VMS06_RS17375;Name=VMS06_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17375 NZ_JAVXZI010000016.1 Protein Homology CDS 76890 78380 . - 0 ID=cds-WP_023306260.1;Parent=gene-VMS06_RS17375;Dbxref=GenBank:WP_023306260.1;Name=WP_023306260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857038.1;locus_tag=VMS06_RS17375;product=MFS transporter;protein_id=WP_023306260.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 78497 79072 . + . ID=gene-VMS06_RS17380;Name=VMS06_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17380 NZ_JAVXZI010000016.1 Protein Homology CDS 78497 79072 . + 0 ID=cds-WP_015570471.1;Parent=gene-VMS06_RS17380;Dbxref=GenBank:WP_015570471.1;Name=WP_015570471.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857036.1;locus_tag=VMS06_RS17380;product=TetR family transcriptional regulator;protein_id=WP_015570471.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 79283 80668 . + . ID=gene-VMS06_RS17385;Name=VMS06_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17385 NZ_JAVXZI010000016.1 Protein Homology CDS 79283 80668 . + 0 ID=cds-WP_058646716.1;Parent=gene-VMS06_RS17385;Dbxref=GenBank:WP_058646716.1;Name=WP_058646716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003843699.1;locus_tag=VMS06_RS17385;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_058646716.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 80736 84476 . + . ID=gene-VMS06_RS17390;Name=VMS06_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17390 NZ_JAVXZI010000016.1 Protein Homology CDS 80736 84476 . + 0 ID=cds-WP_063147284.1;Parent=gene-VMS06_RS17390;Dbxref=GenBank:WP_063147284.1;Name=WP_063147284.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460536.1;locus_tag=VMS06_RS17390;product=nitrate reductase subunit alpha;protein_id=WP_063147284.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 84473 86017 . + . ID=gene-VMS06_RS17395;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=VMS06_RS17395 NZ_JAVXZI010000016.1 Protein Homology CDS 84473 86017 . + 0 ID=cds-WP_063147283.1;Parent=gene-VMS06_RS17395;Dbxref=GenBank:WP_063147283.1;Name=WP_063147283.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=VMS06_RS17395;product=nitrate reductase subunit beta;protein_id=WP_063147283.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 86017 86712 . + . ID=gene-VMS06_RS17400;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=VMS06_RS17400 NZ_JAVXZI010000016.1 Protein Homology CDS 86017 86712 . + 0 ID=cds-WP_022651230.1;Parent=gene-VMS06_RS17400;Dbxref=GenBank:WP_022651230.1;Name=WP_022651230.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227153.1;locus_tag=VMS06_RS17400;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_022651230.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 86709 87389 . + . ID=gene-VMS06_RS17405;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=VMS06_RS17405 NZ_JAVXZI010000016.1 Protein Homology CDS 86709 87389 . + 0 ID=cds-WP_023306265.1;Parent=gene-VMS06_RS17405;Dbxref=GenBank:WP_023306265.1;Name=WP_023306265.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460539.1;locus_tag=VMS06_RS17405;product=respiratory nitrate reductase subunit gamma;protein_id=WP_023306265.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 87466 88311 . - . ID=gene-VMS06_RS17410;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=VMS06_RS17410 NZ_JAVXZI010000016.1 Protein Homology CDS 87466 88311 . - 0 ID=cds-WP_058646554.1;Parent=gene-VMS06_RS17410;Dbxref=GenBank:WP_058646554.1;Name=WP_058646554.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003857025.1;locus_tag=VMS06_RS17410;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_058646554.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 88417 88989 . + . ID=gene-VMS06_RS17415;Name=VMS06_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17415 NZ_JAVXZI010000016.1 Protein Homology CDS 88417 88989 . + 0 ID=cds-WP_023300182.1;Parent=gene-VMS06_RS17415;Dbxref=GenBank:WP_023300182.1;Name=WP_023300182.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570464.1;locus_tag=VMS06_RS17415;product=flavin reductase family protein;protein_id=WP_023300182.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 89038 91137 . - . ID=gene-VMS06_RS17420;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=VMS06_RS17420 NZ_JAVXZI010000016.1 Protein Homology CDS 89038 91137 . - 0 ID=cds-WP_063843824.1;Parent=gene-VMS06_RS17420;Dbxref=GenBank:WP_063843824.1;Name=WP_063843824.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096508.1;locus_tag=VMS06_RS17420;product=elongation factor G;protein_id=WP_063843824.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 91299 91601 . + . ID=gene-VMS06_RS17425;Name=VMS06_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17425 NZ_JAVXZI010000016.1 Protein Homology CDS 91299 91601 . + 0 ID=cds-WP_022648218.1;Parent=gene-VMS06_RS17425;Dbxref=GenBank:WP_022648218.1;Name=WP_022648218.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426140.1;locus_tag=VMS06_RS17425;product=ArsR/SmtB family transcription factor;protein_id=WP_022648218.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 91596 92531 . - . ID=gene-VMS06_RS17430;Name=VMS06_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17430 NZ_JAVXZI010000016.1 Protein Homology CDS 91596 92531 . - 0 ID=cds-WP_063147282.1;Parent=gene-VMS06_RS17430;Dbxref=GenBank:WP_063147282.1;Name=WP_063147282.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016536258.1;locus_tag=VMS06_RS17430;product=LysR family transcriptional regulator;protein_id=WP_063147282.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 92617 93093 . + . ID=gene-VMS06_RS17435;Name=VMS06_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17435 NZ_JAVXZI010000016.1 Protein Homology CDS 92617 93093 . + 0 ID=cds-WP_022648220.1;Parent=gene-VMS06_RS17435;Dbxref=GenBank:WP_022648220.1;Name=WP_022648220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671537.1;locus_tag=VMS06_RS17435;product=GNAT family N-acetyltransferase;protein_id=WP_022648220.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 93234 93869 . - . ID=gene-VMS06_RS17440;Name=VMS06_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17440 NZ_JAVXZI010000016.1 Protein Homology CDS 93234 93869 . - 0 ID=cds-WP_022648221.1;Parent=gene-VMS06_RS17440;Dbxref=GenBank:WP_022648221.1;Name=WP_022648221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426145.1;locus_tag=VMS06_RS17440;product=ECs1377 family protein;protein_id=WP_022648221.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 93960 94961 . - . ID=gene-VMS06_RS17445;Name=VMS06_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17445 NZ_JAVXZI010000016.1 Protein Homology CDS 93960 94961 . - 0 ID=cds-WP_063147281.1;Parent=gene-VMS06_RS17445;Dbxref=GenBank:WP_063147281.1;Name=WP_063147281.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693378.1;locus_tag=VMS06_RS17445;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_063147281.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 95147 95377 . - . ID=gene-VMS06_RS17450;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=VMS06_RS17450 NZ_JAVXZI010000016.1 Protein Homology CDS 95147 95377 . - 0 ID=cds-WP_022648223.1;Parent=gene-VMS06_RS17450;Dbxref=GenBank:WP_022648223.1;Name=WP_022648223.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426149.1;locus_tag=VMS06_RS17450;product=tautomerase PptA;protein_id=WP_022648223.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 95415 96032 . - . ID=gene-VMS06_RS17455;Name=VMS06_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17455 NZ_JAVXZI010000016.1 Protein Homology CDS 95415 96032 . - 0 ID=cds-WP_022648224.1;Parent=gene-VMS06_RS17455;Dbxref=GenBank:WP_022648224.1;Name=WP_022648224.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019076807.1;locus_tag=VMS06_RS17455;product=glutathione S-transferase family protein;protein_id=WP_022648224.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 96199 97086 . - . ID=gene-VMS06_RS17460;Name=VMS06_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17460 NZ_JAVXZI010000016.1 Protein Homology CDS 96199 97086 . - 0 ID=cds-WP_022648225.1;Parent=gene-VMS06_RS17460;Dbxref=GenBank:WP_022648225.1;Name=WP_022648225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014070408.1;locus_tag=VMS06_RS17460;product=transporter substrate-binding domain-containing protein;protein_id=WP_022648225.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 97096 97869 . - . ID=gene-VMS06_RS17465;Name=VMS06_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17465 NZ_JAVXZI010000016.1 Protein Homology CDS 97096 97869 . - 0 ID=cds-WP_022648226.1;Parent=gene-VMS06_RS17465;Dbxref=GenBank:WP_022648226.1;Name=WP_022648226.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693375.1;locus_tag=VMS06_RS17465;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_022648226.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 97853 98779 . - . ID=gene-VMS06_RS17470;Name=VMS06_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17470 NZ_JAVXZI010000016.1 Protein Homology CDS 97853 98779 . - 0 ID=cds-WP_023300190.1;Parent=gene-VMS06_RS17470;Dbxref=GenBank:WP_023300190.1;Name=WP_023300190.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529453.1;locus_tag=VMS06_RS17470;product=amino acid ABC transporter permease;protein_id=WP_023300190.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 98789 99298 . - . ID=gene-VMS06_RS17475;Name=VMS06_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17475 NZ_JAVXZI010000016.1 Protein Homology CDS 98789 99298 . - 0 ID=cds-WP_063147280.1;Parent=gene-VMS06_RS17475;Dbxref=GenBank:WP_063147280.1;Name=WP_063147280.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227170.1;locus_tag=VMS06_RS17475;product=GNAT family N-acetyltransferase;protein_id=WP_063147280.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq pseudogene 99308 101571 . - . ID=gene-VMS06_RS17480;Name=VMS06_RS17480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS17480;pseudo=true NZ_JAVXZI010000016.1 Protein Homology CDS 99308 101571 . - 0 ID=cds-VMS06_RS17480;Parent=gene-VMS06_RS17480;Note=This protein belongs to a clade of FMN-dependent monooxygenases%2C within a broader family of flavin-dependent oxidoreductases%2C the luciferase-like monooxygenase (LMM) family%2C some of whose members use coenzyme F420 rather than FMN.%3B frameshifted;Ontology_term=GO:0008152,GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227171.1;locus_tag=VMS06_RS17480;product=NtaA/DmoA family FMN-dependent monooxygenase;pseudo=true;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 101588 102709 . - . ID=gene-VMS06_RS17485;Name=VMS06_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17485 NZ_JAVXZI010000016.1 Protein Homology CDS 101588 102709 . - 0 ID=cds-WP_063147277.1;Parent=gene-VMS06_RS17485;Dbxref=GenBank:WP_063147277.1;Name=WP_063147277.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227172.1;locus_tag=VMS06_RS17485;product=amidohydrolase;protein_id=WP_063147277.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 102706 103707 . - . ID=gene-VMS06_RS17490;Name=VMS06_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17490 NZ_JAVXZI010000016.1 Protein Homology CDS 102706 103707 . - 0 ID=cds-WP_058646546.1;Parent=gene-VMS06_RS17490;Dbxref=GenBank:WP_058646546.1;Name=WP_058646546.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883941.1;locus_tag=VMS06_RS17490;product=MsnO8 family LLM class oxidoreductase;protein_id=WP_058646546.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 103816 104214 . - . ID=gene-VMS06_RS17495;Name=VMS06_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17495 NZ_JAVXZI010000016.1 Protein Homology CDS 103816 104214 . - 0 ID=cds-WP_063147276.1;Parent=gene-VMS06_RS17495;Dbxref=GenBank:WP_063147276.1;Name=WP_063147276.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570456.1;locus_tag=VMS06_RS17495;product=(R)-mandelonitrile lyase;protein_id=WP_063147276.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 104327 105217 . + . ID=gene-VMS06_RS17500;Name=VMS06_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17500 NZ_JAVXZI010000016.1 Protein Homology CDS 104327 105217 . + 0 ID=cds-WP_063147275.1;Parent=gene-VMS06_RS17500;Dbxref=GenBank:WP_063147275.1;Name=WP_063147275.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431487.1;locus_tag=VMS06_RS17500;product=LysR family transcriptional regulator;protein_id=WP_063147275.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 105545 107041 . + . ID=gene-VMS06_RS17505;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=VMS06_RS17505 NZ_JAVXZI010000016.1 Protein Homology CDS 105545 107041 . + 0 ID=cds-WP_022648235.1;Parent=gene-VMS06_RS17505;Dbxref=GenBank:WP_022648235.1;Name=WP_022648235.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570454.1;locus_tag=VMS06_RS17505;product=L-asparagine permease;protein_id=WP_022648235.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 107134 108195 . - . ID=gene-VMS06_RS17510;Name=yncE;gbkey=Gene;gene=yncE;gene_biotype=protein_coding;locus_tag=VMS06_RS17510 NZ_JAVXZI010000016.1 Protein Homology CDS 107134 108195 . - 0 ID=cds-WP_022648236.1;Parent=gene-VMS06_RS17510;Dbxref=GenBank:WP_022648236.1;Name=WP_022648236.1;gbkey=CDS;gene=yncE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310083.1;locus_tag=VMS06_RS17510;product=7-bladed beta-propeller protein YncE;protein_id=WP_022648236.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 108443 110560 . + . ID=gene-VMS06_RS17515;Name=pqqU;gbkey=Gene;gene=pqqU;gene_biotype=protein_coding;locus_tag=VMS06_RS17515 NZ_JAVXZI010000016.1 Protein Homology CDS 108443 110560 . + 0 ID=cds-WP_063147274.1;Parent=gene-VMS06_RS17515;Dbxref=GenBank:WP_063147274.1;Name=WP_063147274.1;gbkey=CDS;gene=pqqU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906783.1;locus_tag=VMS06_RS17515;product=TonB-dependent receptor PqqU;protein_id=WP_063147274.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 110693 111361 . - . ID=gene-VMS06_RS17520;Name=VMS06_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17520 NZ_JAVXZI010000016.1 Protein Homology CDS 110693 111361 . - 0 ID=cds-WP_022648238.1;Parent=gene-VMS06_RS17520;Dbxref=GenBank:WP_022648238.1;Name=WP_022648238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810746.1;locus_tag=VMS06_RS17520;product=GntR family transcriptional regulator;protein_id=WP_022648238.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 111618 112652 . - . ID=gene-VMS06_RS17525;Name=VMS06_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17525 NZ_JAVXZI010000016.1 Protein Homology CDS 111618 112652 . - 0 ID=cds-WP_022648239.1;Parent=gene-VMS06_RS17525;Dbxref=GenBank:WP_022648239.1;Name=WP_022648239.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150272.1;locus_tag=VMS06_RS17525;product=NADP-dependent oxidoreductase;protein_id=WP_022648239.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 112719 113294 . - . ID=gene-VMS06_RS17530;Name=VMS06_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17530 NZ_JAVXZI010000016.1 Protein Homology CDS 112719 113294 . - 0 ID=cds-WP_017382277.1;Parent=gene-VMS06_RS17530;Dbxref=GenBank:WP_017382277.1;Name=WP_017382277.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810748.1;locus_tag=VMS06_RS17530;product=helix-turn-helix domain-containing protein;protein_id=WP_017382277.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 113443 113961 . + . ID=gene-VMS06_RS17535;Name=VMS06_RS17535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17535 NZ_JAVXZI010000016.1 Protein Homology CDS 113443 113961 . + 0 ID=cds-WP_023306282.1;Parent=gene-VMS06_RS17535;Dbxref=GenBank:WP_023306282.1;Name=WP_023306282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570449.1;locus_tag=VMS06_RS17535;product=GNAT family N-acetyltransferase;protein_id=WP_023306282.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 113958 114407 . + . ID=gene-VMS06_RS17540;Name=VMS06_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17540 NZ_JAVXZI010000016.1 Protein Homology CDS 113958 114407 . + 0 ID=cds-WP_022648242.1;Parent=gene-VMS06_RS17540;Dbxref=GenBank:WP_022648242.1;Name=WP_022648242.1;Ontology_term=GO:0055085,GO:0005215,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310078.1;locus_tag=VMS06_RS17540;product=DMT family transporter;protein_id=WP_022648242.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 114411 114644 . - . ID=gene-VMS06_RS17545;Name=VMS06_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17545 NZ_JAVXZI010000016.1 Protein Homology CDS 114411 114644 . - 0 ID=cds-WP_022648243.1;Parent=gene-VMS06_RS17545;Dbxref=GenBank:WP_022648243.1;Name=WP_022648243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310077.1;locus_tag=VMS06_RS17545;product=YdcY family protein;protein_id=WP_022648243.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 114745 116343 . - . ID=gene-VMS06_RS17550;Name=VMS06_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17550 NZ_JAVXZI010000016.1 Protein Homology CDS 114745 116343 . - 0 ID=cds-WP_058646538.1;Parent=gene-VMS06_RS17550;Dbxref=GenBank:WP_058646538.1;Name=WP_058646538.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431508.1;locus_tag=VMS06_RS17550;product=ABC transporter substrate-binding protein;protein_id=WP_058646538.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 116626 117963 . + . ID=gene-VMS06_RS17555;Name=VMS06_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17555 NZ_JAVXZI010000016.1 Protein Homology CDS 116626 117963 . + 0 ID=cds-WP_063147273.1;Parent=gene-VMS06_RS17555;Dbxref=GenBank:WP_063147273.1;Name=WP_063147273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693366.1;locus_tag=VMS06_RS17555;product=SrfA family protein;protein_id=WP_063147273.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 117968 120949 . + . ID=gene-VMS06_RS17560;Name=VMS06_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17560 NZ_JAVXZI010000016.1 Protein Homology CDS 117968 120949 . + 0 ID=cds-WP_063147272.1;Parent=gene-VMS06_RS17560;Dbxref=GenBank:WP_063147272.1;Name=WP_063147272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460553.1;locus_tag=VMS06_RS17560;product=virulence factor SrfB;protein_id=WP_063147272.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 120946 123120 . + . ID=gene-VMS06_RS17565;Name=VMS06_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17565 NZ_JAVXZI010000016.1 Protein Homology CDS 120946 123120 . + 0 ID=cds-WP_063147271.1;Parent=gene-VMS06_RS17565;Dbxref=GenBank:WP_063147271.1;Name=WP_063147271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693364.1;locus_tag=VMS06_RS17565;product=virulence factor SrfC family protein;protein_id=WP_063147271.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 123154 123912 . - . ID=gene-VMS06_RS17570;Name=VMS06_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17570 NZ_JAVXZI010000016.1 Protein Homology CDS 123154 123912 . - 0 ID=cds-WP_063147270.1;Parent=gene-VMS06_RS17570;Dbxref=GenBank:WP_063147270.1;Name=WP_063147270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570443.1;locus_tag=VMS06_RS17570;product=alpha/beta fold hydrolase;protein_id=WP_063147270.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 123999 124172 . - . ID=gene-VMS06_RS17575;Name=VMS06_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17575 NZ_JAVXZI010000016.1 Protein Homology CDS 123999 124172 . - 0 ID=cds-WP_074136296.1;Parent=gene-VMS06_RS17575;Dbxref=GenBank:WP_074136296.1;Name=WP_074136296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415962.2;locus_tag=VMS06_RS17575;product=GhoT/OrtT family toxin;protein_id=WP_074136296.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 124416 124742 . + . ID=gene-VMS06_RS17580;Name=VMS06_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17580 NZ_JAVXZI010000016.1 Protein Homology CDS 124416 124742 . + 0 ID=cds-WP_015570441.1;Parent=gene-VMS06_RS17580;Dbxref=GenBank:WP_015570441.1;Name=WP_015570441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570441.1;locus_tag=VMS06_RS17580;product=TehB family protein;protein_id=WP_015570441.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 124770 125123 . + . ID=gene-VMS06_RS17585;Name=VMS06_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17585 NZ_JAVXZI010000016.1 Protein Homology CDS 124770 125123 . + 0 ID=cds-WP_003856958.1;Parent=gene-VMS06_RS17585;Dbxref=GenBank:WP_003856958.1;Name=WP_003856958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006175470.1;locus_tag=VMS06_RS17585;product=TehB family protein;protein_id=WP_003856958.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 125127 125309 . + . ID=gene-VMS06_RS17590;Name=VMS06_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17590 NZ_JAVXZI010000016.1 Protein Homology CDS 125127 125309 . + 0 ID=cds-WP_003856955.1;Parent=gene-VMS06_RS17590;Dbxref=GenBank:WP_003856955.1;Name=WP_003856955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460238.1;locus_tag=VMS06_RS17590;product=DUF1869 domain-containing protein;protein_id=WP_003856955.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 125345 126769 . - . ID=gene-VMS06_RS17595;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=VMS06_RS17595 NZ_JAVXZI010000016.1 Protein Homology CDS 125345 126769 . - 0 ID=cds-WP_063147268.1;Parent=gene-VMS06_RS17595;Dbxref=GenBank:WP_063147268.1;Name=WP_063147268.1;Ontology_term=GO:0009447,GO:0019145,GO:0051287;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase (NAD+) activity|0019145||IEA,NAD binding|0051287||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415961.1;locus_tag=VMS06_RS17595;product=aminobutyraldehyde dehydrogenase;protein_id=WP_063147268.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 126909 128333 . - . ID=gene-VMS06_RS17600;Name=VMS06_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17600 NZ_JAVXZI010000016.1 Protein Homology CDS 126909 128333 . - 0 ID=cds-WP_038416126.1;Parent=gene-VMS06_RS17600;Dbxref=GenBank:WP_038416126.1;Name=WP_038416126.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382268.1;locus_tag=VMS06_RS17600;product=aminotransferase-like domain-containing protein;protein_id=WP_038416126.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 128416 128604 . - . ID=gene-VMS06_RS17605;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=VMS06_RS17605 NZ_JAVXZI010000016.1 Protein Homology CDS 128416 128604 . - 0 ID=cds-WP_017693360.1;Parent=gene-VMS06_RS17605;Dbxref=GenBank:WP_017693360.1;Name=WP_017693360.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570439.1;locus_tag=VMS06_RS17605;product=cold shock small protein YmcF;protein_id=WP_017693360.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 129022 129504 . + . ID=gene-VMS06_RS17610;Name=VMS06_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17610 NZ_JAVXZI010000016.1 Protein Homology CDS 129022 129504 . + 0 ID=cds-WP_063147267.1;Parent=gene-VMS06_RS17610;Dbxref=GenBank:WP_063147267.1;Name=WP_063147267.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006175173.1;locus_tag=VMS06_RS17610;product=Hcp family type VI secretion system effector;protein_id=WP_063147267.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 129501 129980 . + . ID=gene-VMS06_RS17615;Name=VMS06_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17615 NZ_JAVXZI010000016.1 Protein Homology CDS 129501 129980 . + 0 ID=cds-WP_072053791.1;Parent=gene-VMS06_RS17615;Dbxref=GenBank:WP_072053791.1;Name=WP_072053791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014883965.1;locus_tag=VMS06_RS17615;product=DUF2778 domain-containing protein;protein_id=WP_072053791.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 130364 131758 . + . ID=gene-VMS06_RS17620;Name=VMS06_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17620 NZ_JAVXZI010000016.1 Protein Homology CDS 130364 131758 . + 0 ID=cds-WP_063147266.1;Parent=gene-VMS06_RS17620;Dbxref=GenBank:WP_063147266.1;Name=WP_063147266.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570438.1;locus_tag=VMS06_RS17620;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_063147266.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 131764 132774 . + . ID=gene-VMS06_RS17625;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=VMS06_RS17625 NZ_JAVXZI010000016.1 Protein Homology CDS 131764 132774 . + 0 ID=cds-WP_046621377.1;Parent=gene-VMS06_RS17625;Dbxref=GenBank:WP_046621377.1;Name=WP_046621377.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007714492.1;locus_tag=VMS06_RS17625;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_046621377.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 132774 132902 . + . ID=gene-VMS06_RS17630;Name=VMS06_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17630 NZ_JAVXZI010000016.1 Protein Homology CDS 132774 132902 . + 0 ID=cds-WP_017693358.1;Parent=gene-VMS06_RS17630;Dbxref=GenBank:WP_017693358.1;Name=WP_017693358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010431546.1;locus_tag=VMS06_RS17630;product=DUF2474 domain-containing protein;protein_id=WP_017693358.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 133027 133464 . + . ID=gene-VMS06_RS17635;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=VMS06_RS17635 NZ_JAVXZI010000016.1 Protein Homology CDS 133027 133464 . + 0 ID=cds-WP_023300211.1;Parent=gene-VMS06_RS17635;Dbxref=GenBank:WP_023300211.1;Name=WP_023300211.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856937.1;locus_tag=VMS06_RS17635;product=heat shock protein HslJ;protein_id=WP_023300211.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 133466 133732 . - . ID=gene-VMS06_RS17640;Name=VMS06_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17640 NZ_JAVXZI010000016.1 Protein Homology CDS 133466 133732 . - 0 ID=cds-WP_003856935.1;Parent=gene-VMS06_RS17640;Dbxref=GenBank:WP_003856935.1;Name=WP_003856935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=VMS06_RS17640;product=putative hemolysin;protein_id=WP_003856935.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 134004 137528 . + . ID=gene-VMS06_RS17645;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=VMS06_RS17645 NZ_JAVXZI010000016.1 Protein Homology CDS 134004 137528 . + 0 ID=cds-WP_038416130.1;Parent=gene-VMS06_RS17645;Dbxref=GenBank:WP_038416130.1;Name=WP_038416130.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020362.1;locus_tag=VMS06_RS17645;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_038416130.1;transl_table=11 NZ_JAVXZI010000016.1 RefSeq pseudogene 137916 138029 . + . ID=gene-VMS06_RS17650;Name=VMS06_RS17650;end_range=138029,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS17650;partial=true;pseudo=true NZ_JAVXZI010000016.1 Protein Homology CDS 137916 138029 . + 0 ID=cds-VMS06_RS17650;Parent=gene-VMS06_RS17650;Note=allows for ions and hydrophilic solutes to cross the outer membrane%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=138029,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460434.1;locus_tag=VMS06_RS17650;partial=true;product=porin;pseudo=true;transl_table=11 NZ_JAVXZI010000016.1 RefSeq gene 138046 138141 . - . ID=gene-VMS06_RS17655;Name=VMS06_RS17655;end_range=138141,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17655;partial=true NZ_JAVXZI010000016.1 Protein Homology CDS 138046 138141 . - 0 ID=cds-WP_000851394.1;Parent=gene-VMS06_RS17655;Dbxref=GenBank:WP_000851394.1;Name=WP_000851394.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=138141,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=VMS06_RS17655;partial=true;product=IS1 family transposase;protein_id=WP_000851394.1;transl_table=11 ##sequence-region NZ_JAVXZI010000017.1 1 135213 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000017.1 RefSeq region 1 135213 . + . ID=NZ_JAVXZI010000017.1:1..135213;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000017.1 RefSeq gene 139 1203 . - . ID=gene-VMS06_RS17660;Name=VMS06_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17660 NZ_JAVXZI010000017.1 Protein Homology CDS 139 1203 . - 0 ID=cds-WP_003860546.1;Parent=gene-VMS06_RS17660;Dbxref=GenBank:WP_003860546.1;Name=WP_003860546.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176634.1;locus_tag=VMS06_RS17660;product=AI-2E family transporter;protein_id=WP_003860546.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 1424 2887 . + . ID=gene-VMS06_RS17665;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=VMS06_RS17665 NZ_JAVXZI010000017.1 Protein Homology CDS 1424 2887 . + 0 ID=cds-WP_003860547.1;Parent=gene-VMS06_RS17665;Dbxref=GenBank:WP_003860547.1;Name=WP_003860547.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311383.1;locus_tag=VMS06_RS17665;product=beta-barrel assembly-enhancing protease;protein_id=WP_003860547.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 2901 3257 . + . ID=gene-VMS06_RS17670;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=VMS06_RS17670 NZ_JAVXZI010000017.1 Protein Homology CDS 2901 3257 . + 0 ID=cds-WP_063148302.1;Parent=gene-VMS06_RS17670;Dbxref=GenBank:WP_063148302.1;Name=WP_063148302.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071290.1;locus_tag=VMS06_RS17670;product=arsenate reductase (glutaredoxin);protein_id=WP_063148302.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 3254 4078 . - . ID=gene-VMS06_RS17675;Name=VMS06_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17675 NZ_JAVXZI010000017.1 Protein Homology CDS 3254 4078 . - 0 ID=cds-WP_063148301.1;Parent=gene-VMS06_RS17675;Dbxref=GenBank:WP_063148301.1;Name=WP_063148301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572195.1;locus_tag=VMS06_RS17675;product=helix-turn-helix transcriptional regulator;protein_id=WP_063148301.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 4226 5545 . + . ID=gene-VMS06_RS17680;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=VMS06_RS17680 NZ_JAVXZI010000017.1 Protein Homology CDS 4226 5545 . + 0 ID=cds-WP_022648975.1;Parent=gene-VMS06_RS17680;Dbxref=GenBank:WP_022648975.1;Name=WP_022648975.1;Ontology_term=GO:0009401,GO:0008982,GO:0019191,GO:0016020;gbkey=CDS;gene=celB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,cellobiose transmembrane transporter activity|0019191||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102253.1;locus_tag=VMS06_RS17680;product=PTS cellobiose transporter subunit IIC;protein_id=WP_022648975.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 5549 6505 . + . ID=gene-VMS06_RS17685;Name=VMS06_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17685 NZ_JAVXZI010000017.1 Protein Homology CDS 5549 6505 . + 0 ID=cds-WP_022648976.1;Parent=gene-VMS06_RS17685;Dbxref=GenBank:WP_022648976.1;Name=WP_022648976.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811487.1;locus_tag=VMS06_RS17685;product=glycosylasparaginase;protein_id=WP_022648976.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 6505 7923 . + . ID=gene-VMS06_RS17690;Name=VMS06_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17690 NZ_JAVXZI010000017.1 Protein Homology CDS 6505 7923 . + 0 ID=cds-WP_063148300.1;Parent=gene-VMS06_RS17690;Dbxref=GenBank:WP_063148300.1;Name=WP_063148300.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0046872,GO:0070006,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=manganese ion binding|0030145||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692946.1;locus_tag=VMS06_RS17690;product=leucyl aminopeptidase family protein;protein_id=WP_063148300.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 8000 8701 . - . ID=gene-VMS06_RS17695;Name=VMS06_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17695 NZ_JAVXZI010000017.1 Protein Homology CDS 8000 8701 . - 0 ID=cds-WP_211482948.1;Parent=gene-VMS06_RS17695;Dbxref=GenBank:WP_211482948.1;Name=WP_211482948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=VMS06_RS17695;product=DnaA inactivator Hda;protein_id=WP_211482948.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 8799 10088 . - . ID=gene-VMS06_RS17700;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=VMS06_RS17700 NZ_JAVXZI010000017.1 Protein Homology CDS 8799 10088 . - 0 ID=cds-WP_063148299.1;Parent=gene-VMS06_RS17700;Dbxref=GenBank:WP_063148299.1;Name=WP_063148299.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136499.1;locus_tag=VMS06_RS17700;product=uracil permease;protein_id=WP_063148299.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 10171 10797 . - . ID=gene-VMS06_RS17705;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=VMS06_RS17705 NZ_JAVXZI010000017.1 Protein Homology CDS 10171 10797 . - 0 ID=cds-WP_022648979.1;Parent=gene-VMS06_RS17705;Dbxref=GenBank:WP_022648979.1;Name=WP_022648979.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=VMS06_RS17705;product=uracil phosphoribosyltransferase;protein_id=WP_022648979.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 11015 12445 . - . ID=gene-VMS06_RS17710;Name=VMS06_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17710 NZ_JAVXZI010000017.1 Protein Homology CDS 11015 12445 . - 0 ID=cds-WP_058676995.1;Parent=gene-VMS06_RS17710;Dbxref=GenBank:WP_058676995.1;Name=WP_058676995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460019.1;locus_tag=VMS06_RS17710;product=6-phospho-beta-glucosidase;protein_id=WP_058676995.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 12712 13749 . + . ID=gene-VMS06_RS17715;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=VMS06_RS17715 NZ_JAVXZI010000017.1 Protein Homology CDS 12712 13749 . + 0 ID=cds-WP_063148298.1;Parent=gene-VMS06_RS17715;Dbxref=GenBank:WP_063148298.1;Name=WP_063148298.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416994.1;locus_tag=VMS06_RS17715;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_063148298.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 13746 14387 . + . ID=gene-VMS06_RS17720;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=VMS06_RS17720 NZ_JAVXZI010000017.1 Protein Homology CDS 13746 14387 . + 0 ID=cds-WP_023300681.1;Parent=gene-VMS06_RS17720;Dbxref=GenBank:WP_023300681.1;Name=WP_023300681.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884779.1;locus_tag=VMS06_RS17720;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_023300681.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 14592 16652 . + . ID=gene-VMS06_RS17725;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=VMS06_RS17725 NZ_JAVXZI010000017.1 Protein Homology CDS 14592 16652 . + 0 ID=cds-WP_006811494.1;Parent=gene-VMS06_RS17725;Dbxref=GenBank:WP_006811494.1;Name=WP_006811494.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461436.1;locus_tag=VMS06_RS17725;product=polyphosphate kinase 1;protein_id=WP_006811494.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 16656 18194 . + . ID=gene-VMS06_RS17730;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=VMS06_RS17730 NZ_JAVXZI010000017.1 Protein Homology CDS 16656 18194 . + 0 ID=cds-WP_003860570.1;Parent=gene-VMS06_RS17730;Dbxref=GenBank:WP_003860570.1;Name=WP_003860570.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383510.1;locus_tag=VMS06_RS17730;product=exopolyphosphatase;protein_id=WP_003860570.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 18142 20439 . - . ID=gene-VMS06_RS17735;Name=VMS06_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17735 NZ_JAVXZI010000017.1 Protein Homology CDS 18142 20439 . - 0 ID=cds-WP_051979833.1;Parent=gene-VMS06_RS17735;Dbxref=GenBank:WP_051979833.1;Name=WP_051979833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860572.1;locus_tag=VMS06_RS17735;product=EAL domain-containing protein;protein_id=WP_051979833.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 20808 20978 . + . ID=gene-VMS06_RS17740;Name=VMS06_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17740 NZ_JAVXZI010000017.1 Protein Homology CDS 20808 20978 . + 0 ID=cds-WP_017383512.1;Parent=gene-VMS06_RS17740;Dbxref=GenBank:WP_017383512.1;Name=WP_017383512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383512.1;locus_tag=VMS06_RS17740;product=YfgG family protein;protein_id=WP_017383512.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 21135 21602 . + . ID=gene-VMS06_RS17745;Name=VMS06_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17745 NZ_JAVXZI010000017.1 Protein Homology CDS 21135 21602 . + 0 ID=cds-WP_003860582.1;Parent=gene-VMS06_RS17745;Dbxref=GenBank:WP_003860582.1;Name=WP_003860582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383513.1;locus_tag=VMS06_RS17745;product=DUF6130 family protein;protein_id=WP_003860582.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 21613 22359 . + . ID=gene-VMS06_RS17750;Name=VMS06_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17750 NZ_JAVXZI010000017.1 Protein Homology CDS 21613 22359 . + 0 ID=cds-WP_063148297.1;Parent=gene-VMS06_RS17750;Dbxref=GenBank:WP_063148297.1;Name=WP_063148297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811501.1;locus_tag=VMS06_RS17750;product=alpha/beta fold hydrolase;protein_id=WP_063148297.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 22490 23326 . - . ID=gene-VMS06_RS17755;Name=VMS06_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17755 NZ_JAVXZI010000017.1 Protein Homology CDS 22490 23326 . - 0 ID=cds-WP_063148296.1;Parent=gene-VMS06_RS17755;Dbxref=GenBank:WP_063148296.1;Name=WP_063148296.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860587.1;locus_tag=VMS06_RS17755;product=MipA/OmpV family protein;protein_id=WP_063148296.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 23532 24209 . + . ID=gene-VMS06_RS17760;Name=VMS06_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17760 NZ_JAVXZI010000017.1 Protein Homology CDS 23532 24209 . + 0 ID=cds-WP_032623790.1;Parent=gene-VMS06_RS17760;Dbxref=GenBank:WP_032623790.1;Name=WP_032623790.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010259845.1;locus_tag=VMS06_RS17760;product=response regulator;protein_id=WP_032623790.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq pseudogene 24209 25598 . + . ID=gene-VMS06_RS17765;Name=VMS06_RS17765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS17765;pseudo=true NZ_JAVXZI010000017.1 Protein Homology CDS 24209 25598 . + 0 ID=cds-VMS06_RS17765;Parent=gene-VMS06_RS17765;Note=frameshifted;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831780.1;locus_tag=VMS06_RS17765;product=sensor histidine kinase;pseudo=true;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 25766 26245 . + . ID=gene-VMS06_RS17770;Name=oqxR;gbkey=Gene;gene=oqxR;gene_biotype=protein_coding;locus_tag=VMS06_RS17770 NZ_JAVXZI010000017.1 Protein Homology CDS 25766 26245 . + 0 ID=cds-WP_003860591.1;Parent=gene-VMS06_RS17770;Dbxref=GenBank:WP_003860591.1;Name=WP_003860591.1;gbkey=CDS;gene=oqxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860591.1;locus_tag=VMS06_RS17770;product=efflux pump transcriptional repressor OqxR;protein_id=WP_003860591.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 26312 29464 . - . ID=gene-VMS06_RS17775;Name=oqxB;gbkey=Gene;gene=oqxB;gene_biotype=protein_coding;locus_tag=VMS06_RS17775 NZ_JAVXZI010000017.1 Protein Homology CDS 26312 29464 . - 0 ID=cds-WP_023300700.1;Parent=gene-VMS06_RS17775;Dbxref=GenBank:WP_023300700.1;Name=WP_023300700.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;gene=oqxB;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021312368.1;locus_tag=VMS06_RS17775;product=multidrug efflux RND transporter permease subunit OqxB;protein_id=WP_023300700.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 29488 30663 . - . ID=gene-VMS06_RS17780;Name=oqxA;gbkey=Gene;gene=oqxA;gene_biotype=protein_coding;locus_tag=VMS06_RS17780 NZ_JAVXZI010000017.1 Protein Homology CDS 29488 30663 . - 0 ID=cds-WP_045308556.1;Parent=gene-VMS06_RS17780;Dbxref=GenBank:WP_045308556.1;Name=WP_045308556.1;gbkey=CDS;gene=oqxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914189.1;locus_tag=VMS06_RS17780;product=multidrug efflux RND transporter periplasmic adaptor subunit OqxA;protein_id=WP_045308556.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 30998 31351 . + . ID=gene-VMS06_RS17785;Name=VMS06_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17785 NZ_JAVXZI010000017.1 Protein Homology CDS 30998 31351 . + 0 ID=cds-WP_006811509.1;Parent=gene-VMS06_RS17785;Dbxref=GenBank:WP_006811509.1;Name=WP_006811509.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811509.1;locus_tag=VMS06_RS17785;product=helix-turn-helix domain-containing protein;protein_id=WP_006811509.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 31454 33031 . - . ID=gene-VMS06_RS17790;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=VMS06_RS17790 NZ_JAVXZI010000017.1 Protein Homology CDS 31454 33031 . - 0 ID=cds-WP_006811514.1;Parent=gene-VMS06_RS17790;Dbxref=GenBank:WP_006811514.1;Name=WP_006811514.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=VMS06_RS17790;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_006811514.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 33100 34566 . - . ID=gene-VMS06_RS17795;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=VMS06_RS17795 NZ_JAVXZI010000017.1 Protein Homology CDS 33100 34566 . - 0 ID=cds-WP_003860601.1;Parent=gene-VMS06_RS17795;Dbxref=GenBank:WP_003860601.1;Name=WP_003860601.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=VMS06_RS17795;product=IMP dehydrogenase;protein_id=WP_003860601.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 34726 36099 . + . ID=gene-VMS06_RS17800;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=VMS06_RS17800 NZ_JAVXZI010000017.1 Protein Homology CDS 34726 36099 . + 0 ID=cds-WP_063148294.1;Parent=gene-VMS06_RS17800;Dbxref=GenBank:WP_063148294.1;Name=WP_063148294.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692932.1;locus_tag=VMS06_RS17800;product=exodeoxyribonuclease VII large subunit;protein_id=WP_063148294.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 36158 37177 . + . ID=gene-VMS06_RS17805;Name=VMS06_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17805 NZ_JAVXZI010000017.1 Protein Homology CDS 36158 37177 . + 0 ID=cds-WP_023306696.1;Parent=gene-VMS06_RS17805;Dbxref=GenBank:WP_023306696.1;Name=WP_023306696.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692931.1;locus_tag=VMS06_RS17805;product=M4 family metallopeptidase;protein_id=WP_023306696.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 37177 37527 . + . ID=gene-VMS06_RS17810;Name=VMS06_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17810 NZ_JAVXZI010000017.1 Protein Homology CDS 37177 37527 . + 0 ID=cds-WP_063148293.1;Parent=gene-VMS06_RS17810;Dbxref=GenBank:WP_063148293.1;Name=WP_063148293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811517.1;locus_tag=VMS06_RS17810;product=protealysin inhibitor emfourin;protein_id=WP_063148293.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 37524 37745 . - . ID=gene-VMS06_RS17815;Name=VMS06_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17815 NZ_JAVXZI010000017.1 Protein Homology CDS 37524 37745 . - 0 ID=cds-WP_023300707.1;Parent=gene-VMS06_RS17815;Dbxref=GenBank:WP_023300707.1;Name=WP_023300707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010433933.1;locus_tag=VMS06_RS17815;product=zinc ribbon domain-containing protein;protein_id=WP_023300707.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 37804 39345 . - . ID=gene-VMS06_RS17820;Name=VMS06_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17820 NZ_JAVXZI010000017.1 Protein Homology CDS 37804 39345 . - 0 ID=cds-WP_023306697.1;Parent=gene-VMS06_RS17820;Dbxref=GenBank:WP_023306697.1;Name=WP_023306697.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003835166.1;locus_tag=VMS06_RS17820;product=peptide MFS transporter;protein_id=WP_023306697.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 39645 41117 . - . ID=gene-VMS06_RS17825;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=VMS06_RS17825 NZ_JAVXZI010000017.1 Protein Homology CDS 39645 41117 . - 0 ID=cds-WP_022648998.1;Parent=gene-VMS06_RS17825;Dbxref=GenBank:WP_022648998.1;Name=WP_022648998.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=VMS06_RS17825;product=ribosome biogenesis GTPase Der;protein_id=WP_022648998.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 41230 42408 . - . ID=gene-VMS06_RS17830;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=VMS06_RS17830 NZ_JAVXZI010000017.1 Protein Homology CDS 41230 42408 . - 0 ID=cds-WP_022648999.1;Parent=gene-VMS06_RS17830;Dbxref=GenBank:WP_022648999.1;Name=WP_022648999.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228214.1;locus_tag=VMS06_RS17830;product=outer membrane protein assembly factor BamB;protein_id=WP_022648999.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 42419 43039 . - . ID=gene-VMS06_RS17835;Name=VMS06_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17835 NZ_JAVXZI010000017.1 Protein Homology CDS 42419 43039 . - 0 ID=cds-WP_032622338.1;Parent=gene-VMS06_RS17835;Dbxref=GenBank:WP_032622338.1;Name=WP_032622338.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417008.1;locus_tag=VMS06_RS17835;product=YfgM family protein;protein_id=WP_032622338.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 43053 44327 . - . ID=gene-VMS06_RS17840;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=VMS06_RS17840 NZ_JAVXZI010000017.1 Protein Homology CDS 43053 44327 . - 0 ID=cds-WP_022649001.1;Parent=gene-VMS06_RS17840;Dbxref=GenBank:WP_022649001.1;Name=WP_022649001.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=VMS06_RS17840;product=histidine--tRNA ligase;protein_id=WP_022649001.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 44409 45527 . - . ID=gene-VMS06_RS17845;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=VMS06_RS17845 NZ_JAVXZI010000017.1 Protein Homology CDS 44409 45527 . - 0 ID=cds-WP_003860619.1;Parent=gene-VMS06_RS17845;Dbxref=GenBank:WP_003860619.1;Name=WP_003860619.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311404.1;locus_tag=VMS06_RS17845;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_003860619.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 45554 46564 . - . ID=gene-VMS06_RS17850;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=VMS06_RS17850 NZ_JAVXZI010000017.1 Protein Homology CDS 45554 46564 . - 0 ID=cds-WP_063148292.1;Parent=gene-VMS06_RS17850;Dbxref=GenBank:WP_063148292.1;Name=WP_063148292.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572171.1;locus_tag=VMS06_RS17850;product=cytoskeleton protein RodZ;protein_id=WP_063148292.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 46856 48022 . - . ID=gene-VMS06_RS17855;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;gene_synonym=trmG;locus_tag=VMS06_RS17855 NZ_JAVXZI010000017.1 Protein Homology CDS 46856 48022 . - 0 ID=cds-WP_003860623.1;Parent=gene-VMS06_RS17855;Dbxref=GenBank:WP_003860623.1;Name=WP_003860623.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502140.1;locus_tag=VMS06_RS17855;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_003860623.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 48170 48601 . - . ID=gene-VMS06_RS17860;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=VMS06_RS17860 NZ_JAVXZI010000017.1 Protein Homology CDS 48170 48601 . - 0 ID=cds-WP_003860625.1;Parent=gene-VMS06_RS17860;Dbxref=GenBank:WP_003860625.1;Name=WP_003860625.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=VMS06_RS17860;product=nucleoside-diphosphate kinase;protein_id=WP_003860625.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 48726 49601 . - . ID=gene-VMS06_RS17865;Name=VMS06_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17865 NZ_JAVXZI010000017.1 Protein Homology CDS 48726 49601 . - 0 ID=cds-WP_063148291.1;Parent=gene-VMS06_RS17865;Dbxref=GenBank:WP_063148291.1;Name=WP_063148291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383529.1;locus_tag=VMS06_RS17865;product=4Fe-4S binding protein;protein_id=WP_063148291.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 49601 50380 . - . ID=gene-VMS06_RS17870;Name=VMS06_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17870 NZ_JAVXZI010000017.1 Protein Homology CDS 49601 50380 . - 0 ID=cds-WP_032623777.1;Parent=gene-VMS06_RS17870;Dbxref=GenBank:WP_032623777.1;Name=WP_032623777.1;Ontology_term=GO:0019645,GO:0009389,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000544867.1;locus_tag=VMS06_RS17870;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_032623777.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 50373 51002 . - . ID=gene-VMS06_RS17875;Name=VMS06_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17875 NZ_JAVXZI010000017.1 Protein Homology CDS 50373 51002 . - 0 ID=cds-WP_022649006.1;Parent=gene-VMS06_RS17875;Dbxref=GenBank:WP_022649006.1;Name=WP_022649006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461464.1;locus_tag=VMS06_RS17875;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_022649006.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 50999 53335 . - . ID=gene-VMS06_RS17880;Name=VMS06_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17880 NZ_JAVXZI010000017.1 Protein Homology CDS 50999 53335 . - 0 ID=cds-WP_063148290.1;Parent=gene-VMS06_RS17880;Dbxref=GenBank:WP_063148290.1;Name=WP_063148290.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664463.1;locus_tag=VMS06_RS17880;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_063148290.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 53424 55751 . - . ID=gene-VMS06_RS17885;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=VMS06_RS17885 NZ_JAVXZI010000017.1 Protein Homology CDS 53424 55751 . - 0 ID=cds-WP_063148289.1;Parent=gene-VMS06_RS17885;Dbxref=GenBank:WP_063148289.1;Name=WP_063148289.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860635.1;locus_tag=VMS06_RS17885;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_063148289.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 55753 60705 . - . ID=gene-VMS06_RS17890;Name=VMS06_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17890 NZ_JAVXZI010000017.1 Protein Homology CDS 55753 60705 . - 0 ID=cds-WP_063148288.1;Parent=gene-VMS06_RS17890;Dbxref=GenBank:WP_063148288.1;Name=WP_063148288.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383533.1;locus_tag=VMS06_RS17890;product=alpha-2-macroglobulin family protein;protein_id=WP_063148288.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 60992 62536 . + . ID=gene-VMS06_RS17895;Name=VMS06_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17895 NZ_JAVXZI010000017.1 Protein Homology CDS 60992 62536 . + 0 ID=cds-WP_048966859.1;Parent=gene-VMS06_RS17895;Dbxref=GenBank:WP_048966859.1;Name=WP_048966859.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176679.1;locus_tag=VMS06_RS17895;product=PTS transporter subunit EIIC;protein_id=WP_048966859.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 62549 63916 . + . ID=gene-VMS06_RS17900;Name=VMS06_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17900 NZ_JAVXZI010000017.1 Protein Homology CDS 62549 63916 . + 0 ID=cds-WP_063148287.1;Parent=gene-VMS06_RS17900;Dbxref=GenBank:WP_063148287.1;Name=WP_063148287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692919.1;locus_tag=VMS06_RS17900;product=6-phospho-alpha-glucosidase;protein_id=WP_063148287.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 64006 64851 . + . ID=gene-VMS06_RS17905;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=VMS06_RS17905 NZ_JAVXZI010000017.1 Protein Homology CDS 64006 64851 . + 0 ID=cds-WP_063148286.1;Parent=gene-VMS06_RS17905;Dbxref=GenBank:WP_063148286.1;Name=WP_063148286.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811537.1;locus_tag=VMS06_RS17905;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_063148286.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 64851 65621 . + . ID=gene-VMS06_RS17910;Name=VMS06_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17910 NZ_JAVXZI010000017.1 Protein Homology CDS 64851 65621 . + 0 ID=cds-WP_023300717.1;Parent=gene-VMS06_RS17910;Dbxref=GenBank:WP_023300717.1;Name=WP_023300717.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502150.1;locus_tag=VMS06_RS17910;product=MurR/RpiR family transcriptional regulator;protein_id=WP_023300717.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 65639 66415 . - . ID=gene-VMS06_RS17915;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=VMS06_RS17915 NZ_JAVXZI010000017.1 Protein Homology CDS 65639 66415 . - 0 ID=cds-WP_063148285.1;Parent=gene-VMS06_RS17915;Dbxref=GenBank:WP_063148285.1;Name=WP_063148285.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311415.2;locus_tag=VMS06_RS17915;product=enhanced serine sensitivity protein SseB;protein_id=WP_063148285.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 66512 67798 . - . ID=gene-VMS06_RS17920;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=VMS06_RS17920 NZ_JAVXZI010000017.1 Protein Homology CDS 66512 67798 . - 0 ID=cds-WP_022649015.1;Parent=gene-VMS06_RS17920;Dbxref=GenBank:WP_022649015.1;Name=WP_022649015.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228226.1;locus_tag=VMS06_RS17920;product=aminopeptidase PepB;protein_id=WP_022649015.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 67852 68052 . - . ID=gene-VMS06_RS17925;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=VMS06_RS17925 NZ_JAVXZI010000017.1 Protein Homology CDS 67852 68052 . - 0 ID=cds-WP_003860650.1;Parent=gene-VMS06_RS17925;Dbxref=GenBank:WP_003860650.1;Name=WP_003860650.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=VMS06_RS17925;product=Fe-S cluster assembly protein IscX;protein_id=WP_003860650.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 68054 68389 . - . ID=gene-VMS06_RS17930;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=VMS06_RS17930 NZ_JAVXZI010000017.1 Protein Homology CDS 68054 68389 . - 0 ID=cds-WP_003860652.1;Parent=gene-VMS06_RS17930;Dbxref=GenBank:WP_003860652.1;Name=WP_003860652.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=VMS06_RS17930;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_003860652.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 68391 70241 . - . ID=gene-VMS06_RS17935;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=VMS06_RS17935 NZ_JAVXZI010000017.1 Protein Homology CDS 68391 70241 . - 0 ID=cds-WP_063148284.1;Parent=gene-VMS06_RS17935;Dbxref=GenBank:WP_063148284.1;Name=WP_063148284.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=VMS06_RS17935;product=Fe-S protein assembly chaperone HscA;protein_id=WP_063148284.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 70256 70771 . - . ID=gene-VMS06_RS17940;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=VMS06_RS17940 NZ_JAVXZI010000017.1 Protein Homology CDS 70256 70771 . - 0 ID=cds-WP_022649017.1;Parent=gene-VMS06_RS17940;Dbxref=GenBank:WP_022649017.1;Name=WP_022649017.1;Ontology_term=GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311420.1;locus_tag=VMS06_RS17940;product=co-chaperone HscB;protein_id=WP_022649017.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 70970 71293 . - . ID=gene-VMS06_RS17945;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=VMS06_RS17945 NZ_JAVXZI010000017.1 Protein Homology CDS 70970 71293 . - 0 ID=cds-WP_003860659.1;Parent=gene-VMS06_RS17945;Dbxref=GenBank:WP_003860659.1;Name=WP_003860659.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311421.1;locus_tag=VMS06_RS17945;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_003860659.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 71307 71693 . - . ID=gene-VMS06_RS17950;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=VMS06_RS17950 NZ_JAVXZI010000017.1 Protein Homology CDS 71307 71693 . - 0 ID=cds-WP_003860661.1;Parent=gene-VMS06_RS17950;Dbxref=GenBank:WP_003860661.1;Name=WP_003860661.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=VMS06_RS17950;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_003860661.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 71718 72932 . - . ID=gene-VMS06_RS17955;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=VMS06_RS17955 NZ_JAVXZI010000017.1 Protein Homology CDS 71718 72932 . - 0 ID=cds-WP_006176692.1;Parent=gene-VMS06_RS17955;Dbxref=GenBank:WP_006176692.1;Name=WP_006176692.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=VMS06_RS17955;product=cysteine desulfurase;protein_id=WP_006176692.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 73050 73541 . - . ID=gene-VMS06_RS17960;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=VMS06_RS17960 NZ_JAVXZI010000017.1 Protein Homology CDS 73050 73541 . - 0 ID=cds-WP_003860665.1;Parent=gene-VMS06_RS17960;Dbxref=GenBank:WP_003860665.1;Name=WP_003860665.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=VMS06_RS17960;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_003860665.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 73762 74487 . - . ID=gene-VMS06_RS17965;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=VMS06_RS17965 NZ_JAVXZI010000017.1 Protein Homology CDS 73762 74487 . - 0 ID=cds-WP_015572157.1;Parent=gene-VMS06_RS17965;Dbxref=GenBank:WP_015572157.1;Name=WP_015572157.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502159.1;locus_tag=VMS06_RS17965;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_015572157.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 74620 75423 . + . ID=gene-VMS06_RS17970;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=VMS06_RS17970 NZ_JAVXZI010000017.1 Protein Homology CDS 74620 75423 . + 0 ID=cds-WP_022649020.1;Parent=gene-VMS06_RS17970;Dbxref=GenBank:WP_022649020.1;Name=WP_022649020.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=VMS06_RS17970;product=inositol-1-monophosphatase;protein_id=WP_022649020.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 75484 76464 . - . ID=gene-VMS06_RS17975;Name=VMS06_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17975 NZ_JAVXZI010000017.1 Protein Homology CDS 75484 76464 . - 0 ID=cds-WP_063148283.1;Parent=gene-VMS06_RS17975;Dbxref=GenBank:WP_063148283.1;Name=WP_063148283.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171187.1;locus_tag=VMS06_RS17975;product=nickel/cobalt transporter;protein_id=WP_063148283.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 76455 77093 . - . ID=gene-VMS06_RS17980;Name=VMS06_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17980 NZ_JAVXZI010000017.1 Protein Homology CDS 76455 77093 . - 0 ID=cds-WP_063148282.1;Parent=gene-VMS06_RS17980;Dbxref=GenBank:WP_063148282.1;Name=WP_063148282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860670.1;locus_tag=VMS06_RS17980;product=DUF1007 family protein;protein_id=WP_063148282.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 77219 78496 . + . ID=gene-VMS06_RS17985;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=VMS06_RS17985 NZ_JAVXZI010000017.1 Protein Homology CDS 77219 78496 . + 0 ID=cds-WP_023300722.1;Parent=gene-VMS06_RS17985;Dbxref=GenBank:WP_023300722.1;Name=WP_023300722.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811547.1;locus_tag=VMS06_RS17985;product=stationary phase inducible protein CsiE;protein_id=WP_023300722.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 78497 79636 . - . ID=gene-VMS06_RS17990;Name=VMS06_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17990 NZ_JAVXZI010000017.1 Protein Homology CDS 78497 79636 . - 0 ID=cds-WP_003860673.1;Parent=gene-VMS06_RS17990;Dbxref=GenBank:WP_003860673.1;Name=WP_003860673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692912.1;locus_tag=VMS06_RS17990;product=3-phenylpropionate MFS transporter;protein_id=WP_003860673.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 79809 80231 . + . ID=gene-VMS06_RS17995;Name=VMS06_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS17995 NZ_JAVXZI010000017.1 Protein Homology CDS 79809 80231 . + 0 ID=cds-WP_038416512.1;Parent=gene-VMS06_RS17995;Dbxref=GenBank:WP_038416512.1;Name=WP_038416512.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228246.1;locus_tag=VMS06_RS17995;product=DoxX family protein;protein_id=WP_038416512.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 80285 81538 . - . ID=gene-VMS06_RS18000;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=VMS06_RS18000 NZ_JAVXZI010000017.1 Protein Homology CDS 80285 81538 . - 0 ID=cds-WP_003860678.1;Parent=gene-VMS06_RS18000;Dbxref=GenBank:WP_003860678.1;Name=WP_003860678.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from L-serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=VMS06_RS18000;product=serine hydroxymethyltransferase;protein_id=WP_003860678.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 81843 83033 . + . ID=gene-VMS06_RS18005;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=VMS06_RS18005 NZ_JAVXZI010000017.1 Protein Homology CDS 81843 83033 . + 0 ID=cds-WP_032623756.1;Parent=gene-VMS06_RS18005;Dbxref=GenBank:WP_032623756.1;Name=WP_032623756.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311445.1;locus_tag=VMS06_RS18005;product=NO-inducible flavohemoprotein;protein_id=WP_032623756.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 83114 83452 . - . ID=gene-VMS06_RS18010;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=VMS06_RS18010 NZ_JAVXZI010000017.1 Protein Homology CDS 83114 83452 . - 0 ID=cds-WP_003860685.1;Parent=gene-VMS06_RS18010;Dbxref=GenBank:WP_003860685.1;Name=WP_003860685.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=VMS06_RS18010;product=nitrogen regulatory protein P-II;protein_id=WP_003860685.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 83533 84870 . - . ID=gene-VMS06_RS18015;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=VMS06_RS18015 NZ_JAVXZI010000017.1 Protein Homology CDS 83533 84870 . - 0 ID=cds-WP_015572150.1;Parent=gene-VMS06_RS18015;Dbxref=GenBank:WP_015572150.1;Name=WP_015572150.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461497.1;locus_tag=VMS06_RS18015;product=two-component system response regulator GlrR;protein_id=WP_015572150.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 84867 85619 . - . ID=gene-VMS06_RS18020;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=VMS06_RS18020 NZ_JAVXZI010000017.1 Protein Homology CDS 84867 85619 . - 0 ID=cds-WP_022649028.1;Parent=gene-VMS06_RS18020;Dbxref=GenBank:WP_022649028.1;Name=WP_022649028.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572149.1;locus_tag=VMS06_RS18020;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_022649028.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 85616 87049 . - . ID=gene-VMS06_RS18025;Name=qseE;gbkey=Gene;gene=qseE;gene_biotype=protein_coding;locus_tag=VMS06_RS18025 NZ_JAVXZI010000017.1 Protein Homology CDS 85616 87049 . - 0 ID=cds-WP_032622390.1;Parent=gene-VMS06_RS18025;Dbxref=GenBank:WP_032622390.1;Name=WP_032622390.1;gbkey=CDS;gene=qseE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860691.1;locus_tag=VMS06_RS18025;product=two component system sensor histidine kinase QseE/GlrK;protein_id=WP_032622390.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 87582 91469 . - . ID=gene-VMS06_RS18030;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=VMS06_RS18030 NZ_JAVXZI010000017.1 Protein Homology CDS 87582 91469 . - 0 ID=cds-WP_045308545.1;Parent=gene-VMS06_RS18030;Dbxref=GenBank:WP_045308545.1;Name=WP_045308545.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311450.1;locus_tag=VMS06_RS18030;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_045308545.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 91737 93287 . + . ID=gene-VMS06_RS18035;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=VMS06_RS18035 NZ_JAVXZI010000017.1 Protein Homology CDS 91737 93287 . + 0 ID=cds-WP_032623752.1;Parent=gene-VMS06_RS18035;Dbxref=GenBank:WP_032623752.1;Name=WP_032623752.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434044.1;locus_tag=VMS06_RS18035;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_032623752.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 93175 93714 . - . ID=gene-VMS06_RS18040;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=VMS06_RS18040 NZ_JAVXZI010000017.1 Protein Homology CDS 93175 93714 . - 0 ID=cds-WP_022649032.1;Parent=gene-VMS06_RS18040;Dbxref=GenBank:WP_022649032.1;Name=WP_022649032.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832917.1;locus_tag=VMS06_RS18040;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_022649032.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 93739 94374 . - . ID=gene-VMS06_RS18045;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=VMS06_RS18045 NZ_JAVXZI010000017.1 Protein Homology CDS 93739 94374 . - 0 ID=cds-WP_063148281.1;Parent=gene-VMS06_RS18045;Dbxref=GenBank:WP_063148281.1;Name=WP_063148281.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461504.1;locus_tag=VMS06_RS18045;product=phosphatidylglycerophosphatase C;protein_id=WP_063148281.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 94378 95742 . - . ID=gene-VMS06_RS18050;Name=VMS06_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18050 NZ_JAVXZI010000017.1 Protein Homology CDS 94378 95742 . - 0 ID=cds-WP_323630695.1;Parent=gene-VMS06_RS18050;Dbxref=GenBank:WP_323630695.1;Name=WP_323630695.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461505.1;locus_tag=VMS06_RS18050;product=PTS transporter subunit EIIC;protein_id=WP_323630695.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 95752 96648 . - . ID=gene-VMS06_RS18055;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=VMS06_RS18055 NZ_JAVXZI010000017.1 Protein Homology CDS 95752 96648 . - 0 ID=cds-WP_023306721.1;Parent=gene-VMS06_RS18055;Dbxref=GenBank:WP_023306721.1;Name=WP_023306721.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811559.1;locus_tag=VMS06_RS18055;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_023306721.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 96767 97615 . + . ID=gene-VMS06_RS18060;Name=VMS06_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18060 NZ_JAVXZI010000017.1 Protein Homology CDS 96767 97615 . + 0 ID=cds-WP_023300733.1;Parent=gene-VMS06_RS18060;Dbxref=GenBank:WP_023300733.1;Name=WP_023300733.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461507.1;locus_tag=VMS06_RS18060;product=MurR/RpiR family transcriptional regulator;protein_id=WP_023300733.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 97672 97932 . + . ID=gene-VMS06_RS18065;Name=VMS06_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18065 NZ_JAVXZI010000017.1 Protein Homology CDS 97672 97932 . + 0 ID=cds-WP_023300734.1;Parent=gene-VMS06_RS18065;Dbxref=GenBank:WP_023300734.1;Name=WP_023300734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228258.1;locus_tag=VMS06_RS18065;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_023300734.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 97929 98309 . - . ID=gene-VMS06_RS18070;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=VMS06_RS18070 NZ_JAVXZI010000017.1 Protein Homology CDS 97929 98309 . - 0 ID=cds-WP_063148280.1;Parent=gene-VMS06_RS18070;Dbxref=GenBank:WP_063148280.1;Name=WP_063148280.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417058.1;locus_tag=VMS06_RS18070;product=holo-ACP synthase;protein_id=WP_063148280.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 98309 99040 . - . ID=gene-VMS06_RS18075;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=VMS06_RS18075 NZ_JAVXZI010000017.1 Protein Homology CDS 98309 99040 . - 0 ID=cds-WP_063148279.1;Parent=gene-VMS06_RS18075;Dbxref=GenBank:WP_063148279.1;Name=WP_063148279.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171210.1;locus_tag=VMS06_RS18075;product=pyridoxine 5'-phosphate synthase;protein_id=WP_063148279.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 99116 99823 . - . ID=gene-VMS06_RS18080;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=VMS06_RS18080 NZ_JAVXZI010000017.1 Protein Homology CDS 99116 99823 . - 0 ID=cds-WP_015572142.1;Parent=gene-VMS06_RS18080;Dbxref=GenBank:WP_015572142.1;Name=WP_015572142.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171211.1;locus_tag=VMS06_RS18080;product=DNA repair protein RecO;protein_id=WP_015572142.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 99841 100746 . - . ID=gene-VMS06_RS18085;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=VMS06_RS18085 NZ_JAVXZI010000017.1 Protein Homology CDS 99841 100746 . - 0 ID=cds-WP_022649038.1;Parent=gene-VMS06_RS18085;Dbxref=GenBank:WP_022649038.1;Name=WP_022649038.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434071.1;locus_tag=VMS06_RS18085;product=GTPase Era;protein_id=WP_022649038.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 100743 101423 . - . ID=gene-VMS06_RS18090;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=VMS06_RS18090 NZ_JAVXZI010000017.1 Protein Homology CDS 100743 101423 . - 0 ID=cds-WP_003860711.1;Parent=gene-VMS06_RS18090;Dbxref=GenBank:WP_003860711.1;Name=WP_003860711.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=VMS06_RS18090;product=ribonuclease III;protein_id=WP_003860711.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 101647 102621 . - . ID=gene-VMS06_RS18095;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=VMS06_RS18095 NZ_JAVXZI010000017.1 Protein Homology CDS 101647 102621 . - 0 ID=cds-WP_023306724.1;Parent=gene-VMS06_RS18095;Dbxref=GenBank:WP_023306724.1;Name=WP_023306724.1;Ontology_term=GO:0051604,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311461.1;locus_tag=VMS06_RS18095;product=signal peptidase I;protein_id=WP_023306724.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 102637 104442 . - . ID=gene-VMS06_RS18100;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=VMS06_RS18100 NZ_JAVXZI010000017.1 Protein Homology CDS 102637 104442 . - 0 ID=cds-WP_022649041.1;Parent=gene-VMS06_RS18100;Dbxref=GenBank:WP_022649041.1;Name=WP_022649041.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860714.1;locus_tag=VMS06_RS18100;product=translation elongation factor 4;protein_id=WP_022649041.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 105408 106340 . - . ID=gene-VMS06_RS18105;Name=VMS06_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18105 NZ_JAVXZI010000017.1 Protein Homology CDS 105408 106340 . - 0 ID=cds-WP_323630696.1;Parent=gene-VMS06_RS18105;Dbxref=GenBank:WP_323630696.1;Name=WP_323630696.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692904.1;locus_tag=VMS06_RS18105;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_323630696.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 106485 108011 . - . ID=gene-VMS06_RS18110;Name=VMS06_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18110 NZ_JAVXZI010000017.1 Protein Homology CDS 106485 108011 . - 0 ID=cds-WP_038416523.1;Parent=gene-VMS06_RS18110;Dbxref=GenBank:WP_038416523.1;Name=WP_038416523.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079682.1;locus_tag=VMS06_RS18110;product=flagellin N-terminal helical domain-containing protein;protein_id=WP_038416523.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 108771 109193 . - . ID=gene-VMS06_RS18115;Name=VMS06_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18115 NZ_JAVXZI010000017.1 GeneMarkS-2+ CDS 108771 109193 . - 0 ID=cds-WP_038416524.1;Parent=gene-VMS06_RS18115;Dbxref=GenBank:WP_038416524.1;Name=WP_038416524.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS18115;product=hypothetical protein;protein_id=WP_038416524.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 109309 109857 . - . ID=gene-VMS06_RS18120;Name=VMS06_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18120 NZ_JAVXZI010000017.1 Protein Homology CDS 109309 109857 . - 0 ID=cds-WP_045142480.1;Parent=gene-VMS06_RS18120;Dbxref=GenBank:WP_045142480.1;Name=WP_045142480.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570911.1;locus_tag=VMS06_RS18120;product=recombinase family protein;protein_id=WP_045142480.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 110084 110782 . + . ID=gene-VMS06_RS18125;Name=VMS06_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18125 NZ_JAVXZI010000017.1 Protein Homology CDS 110084 110782 . + 0 ID=cds-WP_323630697.1;Parent=gene-VMS06_RS18125;Dbxref=GenBank:WP_323630697.1;Name=WP_323630697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882626.1;locus_tag=VMS06_RS18125;product=phage tail fiber protein;protein_id=WP_323630697.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 110791 111621 . + . ID=gene-VMS06_RS18130;Name=VMS06_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18130 NZ_JAVXZI010000017.1 Protein Homology CDS 110791 111621 . + 0 ID=cds-WP_180240142.1;Parent=gene-VMS06_RS18130;Dbxref=GenBank:WP_180240142.1;Name=WP_180240142.1;Ontology_term=GO:0019062,GO:0046718,GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;go_process=virion attachment to host cell|0019062||IEA,symbiont entry into host cell|0046718||IEA;inference=COORDINATES: protein motif:HMM:NF025253.7;locus_tag=VMS06_RS18130;product=tail fiber domain-containing protein;protein_id=WP_180240142.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 111618 112895 . - . ID=gene-VMS06_RS18135;Name=VMS06_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18135 NZ_JAVXZI010000017.1 Protein Homology CDS 111618 112895 . - 0 ID=cds-WP_311017987.1;Parent=gene-VMS06_RS18135;Dbxref=GenBank:WP_311017987.1;Name=WP_311017987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382565.1;locus_tag=VMS06_RS18135;product=phage tail fiber protein;protein_id=WP_311017987.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 112954 113187 . - . ID=gene-VMS06_RS18140;Name=cor;gbkey=Gene;gene=cor;gene_biotype=protein_coding;locus_tag=VMS06_RS18140 NZ_JAVXZI010000017.1 Protein Homology CDS 112954 113187 . - 0 ID=cds-WP_017382566.1;Parent=gene-VMS06_RS18140;Dbxref=GenBank:WP_017382566.1;Name=WP_017382566.1;gbkey=CDS;gene=cor;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382566.1;locus_tag=VMS06_RS18140;product=phage exclusion lipoprotein Cor;protein_id=WP_017382566.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 113295 113966 . - . ID=gene-VMS06_RS18145;Name=VMS06_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18145 NZ_JAVXZI010000017.1 Protein Homology CDS 113295 113966 . - 0 ID=cds-WP_096204619.1;Parent=gene-VMS06_RS18145;Dbxref=GenBank:WP_096204619.1;Name=WP_096204619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809145.1;locus_tag=VMS06_RS18145;product=hypothetical protein;protein_id=WP_096204619.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 113967 114281 . - . ID=gene-VMS06_RS18150;Name=VMS06_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18150 NZ_JAVXZI010000017.1 Protein Homology CDS 113967 114281 . - 0 ID=cds-WP_017694302.1;Parent=gene-VMS06_RS18150;Dbxref=GenBank:WP_017694302.1;Name=WP_017694302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694302.1;locus_tag=VMS06_RS18150;product=hypothetical protein;protein_id=WP_017694302.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 114325 117873 . - . ID=gene-VMS06_RS18155;Name=VMS06_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18155 NZ_JAVXZI010000017.1 Protein Homology CDS 114325 117873 . - 0 ID=cds-WP_096204617.1;Parent=gene-VMS06_RS18155;Dbxref=GenBank:WP_096204617.1;Name=WP_096204617.1;Ontology_term=GO:0019062,GO:0046813,GO:0098003,GO:0005515,GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;go_function=protein binding|0005515||IEA;go_process=virion attachment to host cell|0019062||IEA,receptor-mediated virion attachment to host cell|0046813||IEA,viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694303.1;locus_tag=VMS06_RS18155;product=TipJ family phage tail tip protein;protein_id=WP_096204617.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 117925 118554 . - . ID=gene-VMS06_RS18160;Name=VMS06_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18160 NZ_JAVXZI010000017.1 Protein Homology CDS 117925 118554 . - 0 ID=cds-WP_096204615.1;Parent=gene-VMS06_RS18160;Dbxref=GenBank:WP_096204615.1;Name=WP_096204615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570918.1;locus_tag=VMS06_RS18160;product=tail assembly protein;protein_id=WP_096204615.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 118588 119298 . - . ID=gene-VMS06_RS18165;Name=VMS06_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18165 NZ_JAVXZI010000017.1 Protein Homology CDS 118588 119298 . - 0 ID=cds-WP_096204613.1;Parent=gene-VMS06_RS18165;Dbxref=GenBank:WP_096204613.1;Name=WP_096204613.1;Ontology_term=GO:0006508,GO:0008233,GO:0008270,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882526.1;locus_tag=VMS06_RS18165;product=C40 family peptidase;protein_id=WP_096204613.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 119300 120055 . - . ID=gene-VMS06_RS18170;Name=VMS06_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18170 NZ_JAVXZI010000017.1 Protein Homology CDS 119300 120055 . - 0 ID=cds-WP_096204610.1;Parent=gene-VMS06_RS18170;Dbxref=GenBank:WP_096204610.1;Name=WP_096204610.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882525.1;locus_tag=VMS06_RS18170;product=phage minor tail protein L;protein_id=WP_096204610.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 120052 120399 . - . ID=gene-VMS06_RS18175;Name=VMS06_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18175 NZ_JAVXZI010000017.1 Protein Homology CDS 120052 120399 . - 0 ID=cds-WP_023296494.1;Parent=gene-VMS06_RS18175;Dbxref=GenBank:WP_023296494.1;Name=WP_023296494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211710.1;locus_tag=VMS06_RS18175;product=phage tail protein;protein_id=WP_023296494.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 120456 120809 . - . ID=gene-VMS06_RS18180;Name=VMS06_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18180 NZ_JAVXZI010000017.1 Protein Homology CDS 120456 120809 . - 0 ID=cds-WP_020690998.1;Parent=gene-VMS06_RS18180;Dbxref=GenBank:WP_020690998.1;Name=WP_020690998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020690998.1;locus_tag=VMS06_RS18180;product=hypothetical protein;protein_id=WP_020690998.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 120885 123797 . - . ID=gene-VMS06_RS18185;Name=VMS06_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18185 NZ_JAVXZI010000017.1 Protein Homology CDS 120885 123797 . - 0 ID=cds-WP_096204608.1;Parent=gene-VMS06_RS18185;Dbxref=GenBank:WP_096204608.1;Name=WP_096204608.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570923.1;locus_tag=VMS06_RS18185;product=phage tail tape measure protein;protein_id=WP_096204608.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 123794 124081 . - . ID=gene-VMS06_RS18190;Name=VMS06_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18190 NZ_JAVXZI010000017.1 Protein Homology CDS 123794 124081 . - 0 ID=cds-WP_015570924.1;Parent=gene-VMS06_RS18190;Dbxref=GenBank:WP_015570924.1;Name=WP_015570924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570924.1;locus_tag=VMS06_RS18190;product=DUF1799 domain-containing protein;protein_id=WP_015570924.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 124105 124416 . - . ID=gene-VMS06_RS18195;Name=VMS06_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18195 NZ_JAVXZI010000017.1 Protein Homology CDS 124105 124416 . - 0 ID=cds-WP_015570925.1;Parent=gene-VMS06_RS18195;Dbxref=GenBank:WP_015570925.1;Name=WP_015570925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211712.1;locus_tag=VMS06_RS18195;product=phage tail assembly chaperone;protein_id=WP_015570925.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 124478 125149 . - . ID=gene-VMS06_RS18200;Name=VMS06_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18200 NZ_JAVXZI010000017.1 Protein Homology CDS 124478 125149 . - 0 ID=cds-WP_015570926.1;Parent=gene-VMS06_RS18200;Dbxref=GenBank:WP_015570926.1;Name=WP_015570926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693490.1;locus_tag=VMS06_RS18200;product=phage tail protein;protein_id=WP_015570926.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 125206 125616 . - . ID=gene-VMS06_RS18205;Name=VMS06_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18205 NZ_JAVXZI010000017.1 Protein Homology CDS 125206 125616 . - 0 ID=cds-WP_096204605.1;Parent=gene-VMS06_RS18205;Dbxref=GenBank:WP_096204605.1;Name=WP_096204605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693491.1;locus_tag=VMS06_RS18205;product=DUF4128 domain-containing protein;protein_id=WP_096204605.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 125613 126197 . - . ID=gene-VMS06_RS18210;Name=VMS06_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18210 NZ_JAVXZI010000017.1 Protein Homology CDS 125613 126197 . - 0 ID=cds-WP_096204602.1;Parent=gene-VMS06_RS18210;Dbxref=GenBank:WP_096204602.1;Name=WP_096204602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082946.1;locus_tag=VMS06_RS18210;product=hypothetical protein;protein_id=WP_096204602.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 126199 126549 . - . ID=gene-VMS06_RS18215;Name=VMS06_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18215 NZ_JAVXZI010000017.1 Protein Homology CDS 126199 126549 . - 0 ID=cds-WP_096204599.1;Parent=gene-VMS06_RS18215;Dbxref=GenBank:WP_096204599.1;Name=WP_096204599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693493.1;locus_tag=VMS06_RS18215;product=hypothetical protein;protein_id=WP_096204599.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 126551 127033 . - . ID=gene-VMS06_RS18220;Name=VMS06_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18220 NZ_JAVXZI010000017.1 Protein Homology CDS 126551 127033 . - 0 ID=cds-WP_180240144.1;Parent=gene-VMS06_RS18220;Dbxref=GenBank:WP_180240144.1;Name=WP_180240144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964690.1;locus_tag=VMS06_RS18220;product=DnaT-like ssDNA-binding protein;protein_id=WP_180240144.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 127070 127426 . - . ID=gene-VMS06_RS18225;Name=VMS06_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18225 NZ_JAVXZI010000017.1 Protein Homology CDS 127070 127426 . - 0 ID=cds-WP_162533032.1;Parent=gene-VMS06_RS18225;Dbxref=GenBank:WP_162533032.1;Name=WP_162533032.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF014428.7;locus_tag=VMS06_RS18225;product=Ig-like domain-containing protein;protein_id=WP_162533032.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 127351 128304 . - . ID=gene-VMS06_RS18230;Name=VMS06_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18230 NZ_JAVXZI010000017.1 Protein Homology CDS 127351 128304 . - 0 ID=cds-WP_032654547.1;Parent=gene-VMS06_RS18230;Dbxref=GenBank:WP_032654547.1;Name=WP_032654547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004216824.1;locus_tag=VMS06_RS18230;product=major capsid protein;protein_id=WP_032654547.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 128317 129087 . - . ID=gene-VMS06_RS18235;Name=VMS06_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18235 NZ_JAVXZI010000017.1 Protein Homology CDS 128317 129087 . - 0 ID=cds-WP_180240145.1;Parent=gene-VMS06_RS18235;Dbxref=GenBank:WP_180240145.1;Name=WP_180240145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190654.1;locus_tag=VMS06_RS18235;product=hypothetical protein;protein_id=WP_180240145.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 129174 130265 . - . ID=gene-VMS06_RS18240;Name=VMS06_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18240 NZ_JAVXZI010000017.1 Protein Homology CDS 129174 130265 . - 0 ID=cds-WP_096204596.1;Parent=gene-VMS06_RS18240;Dbxref=GenBank:WP_096204596.1;Name=WP_096204596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693496.1;locus_tag=VMS06_RS18240;product=phage minor head protein;protein_id=WP_096204596.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 130267 131655 . - . ID=gene-VMS06_RS18245;Name=VMS06_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18245 NZ_JAVXZI010000017.1 Protein Homology CDS 130267 131655 . - 0 ID=cds-WP_096204593.1;Parent=gene-VMS06_RS18245;Dbxref=GenBank:WP_096204593.1;Name=WP_096204593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693497.1;locus_tag=VMS06_RS18245;product=DUF4055 domain-containing protein;protein_id=WP_096204593.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 131657 132964 . - . ID=gene-VMS06_RS18250;Name=VMS06_RS18250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18250 NZ_JAVXZI010000017.1 Protein Homology CDS 131657 132964 . - 0 ID=cds-WP_015570933.1;Parent=gene-VMS06_RS18250;Dbxref=GenBank:WP_015570933.1;Name=WP_015570933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693498.1;locus_tag=VMS06_RS18250;product=terminase large subunit domain-containing protein;protein_id=WP_015570933.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 132942 133940 . - . ID=gene-VMS06_RS18255;Name=VMS06_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18255 NZ_JAVXZI010000017.1 Protein Homology CDS 132942 133940 . - 0 ID=cds-WP_015570934.1;Parent=gene-VMS06_RS18255;Dbxref=GenBank:WP_015570934.1;Name=WP_015570934.1;Ontology_term=GO:0051276,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170292.1;locus_tag=VMS06_RS18255;product=terminase small subunit;protein_id=WP_015570934.1;transl_table=11 NZ_JAVXZI010000017.1 RefSeq gene 134160 134390 . - . ID=gene-VMS06_RS18260;Name=VMS06_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18260 NZ_JAVXZI010000017.1 Protein Homology CDS 134160 134390 . - 0 ID=cds-WP_045349480.1;Parent=gene-VMS06_RS18260;Dbxref=GenBank:WP_045349480.1;Name=WP_045349480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859853.1;locus_tag=VMS06_RS18260;product=hypothetical protein;protein_id=WP_045349480.1;transl_table=11 ##sequence-region NZ_JAVXZI010000018.1 1 133095 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000018.1 RefSeq region 1 133095 . + . ID=NZ_JAVXZI010000018.1:1..133095;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000018.1 RefSeq gene 1 255 . - . ID=gene-VMS06_RS18265;Name=VMS06_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18265;partial=true;start_range=.,1 NZ_JAVXZI010000018.1 Protein Homology CDS 1 255 . - 0 ID=cds-WP_000031672.1;Parent=gene-VMS06_RS18265;Dbxref=GenBank:WP_000031672.1;Name=WP_000031672.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=VMS06_RS18265;partial=true;product=GTP-binding protein;protein_id=WP_000031672.1;start_range=.,1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 374 449 . - . ID=gene-VMS06_RS18270;Name=VMS06_RS18270;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS18270 NZ_JAVXZI010000018.1 tRNAscan-SE tRNA 374 449 . - . ID=rna-VMS06_RS18270;Parent=gene-VMS06_RS18270;anticodon=(pos:complement(414..416));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18270;product=tRNA-Thr NZ_JAVXZI010000018.1 tRNAscan-SE exon 374 449 . - . ID=exon-VMS06_RS18270-1;Parent=rna-VMS06_RS18270;anticodon=(pos:complement(414..416));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18270;product=tRNA-Thr NZ_JAVXZI010000018.1 RefSeq gene 456 530 . - . ID=gene-VMS06_RS18275;Name=VMS06_RS18275;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS18275 NZ_JAVXZI010000018.1 tRNAscan-SE tRNA 456 530 . - . ID=rna-VMS06_RS18275;Parent=gene-VMS06_RS18275;anticodon=(pos:complement(495..497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18275;product=tRNA-Gly NZ_JAVXZI010000018.1 tRNAscan-SE exon 456 530 . - . ID=exon-VMS06_RS18275-1;Parent=rna-VMS06_RS18275;anticodon=(pos:complement(495..497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18275;product=tRNA-Gly NZ_JAVXZI010000018.1 RefSeq gene 647 731 . - . ID=gene-VMS06_RS18280;Name=VMS06_RS18280;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS18280 NZ_JAVXZI010000018.1 tRNAscan-SE tRNA 647 731 . - . ID=rna-VMS06_RS18280;Parent=gene-VMS06_RS18280;anticodon=(pos:complement(695..697));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18280;product=tRNA-Tyr NZ_JAVXZI010000018.1 tRNAscan-SE exon 647 731 . - . ID=exon-VMS06_RS18280-1;Parent=rna-VMS06_RS18280;anticodon=(pos:complement(695..697));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18280;product=tRNA-Tyr NZ_JAVXZI010000018.1 RefSeq gene 740 815 . - . ID=gene-VMS06_RS18285;Name=VMS06_RS18285;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS18285 NZ_JAVXZI010000018.1 tRNAscan-SE tRNA 740 815 . - . ID=rna-VMS06_RS18285;Parent=gene-VMS06_RS18285;anticodon=(pos:complement(780..782));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18285;product=tRNA-Thr NZ_JAVXZI010000018.1 tRNAscan-SE exon 740 815 . - . ID=exon-VMS06_RS18285-1;Parent=rna-VMS06_RS18285;anticodon=(pos:complement(780..782));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18285;product=tRNA-Thr NZ_JAVXZI010000018.1 RefSeq gene 1133 2083 . + . ID=gene-VMS06_RS18290;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=VMS06_RS18290 NZ_JAVXZI010000018.1 Protein Homology CDS 1133 2083 . + 0 ID=cds-WP_032622068.1;Parent=gene-VMS06_RS18290;Dbxref=GenBank:WP_032622068.1;Name=WP_032622068.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418405.1;locus_tag=VMS06_RS18290;product=type I pantothenate kinase;protein_id=WP_032622068.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 2127 3125 . - . ID=gene-VMS06_RS18295;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=VMS06_RS18295 NZ_JAVXZI010000018.1 Protein Homology CDS 2127 3125 . - 0 ID=cds-WP_022646698.1;Parent=gene-VMS06_RS18295;Dbxref=GenBank:WP_022646698.1;Name=WP_022646698.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426213.1;locus_tag=VMS06_RS18295;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_022646698.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 3122 4105 . - . ID=gene-VMS06_RS18300;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=VMS06_RS18300 NZ_JAVXZI010000018.1 Protein Homology CDS 3122 4105 . - 0 ID=cds-WP_010426220.1;Parent=gene-VMS06_RS18300;Dbxref=GenBank:WP_010426220.1;Name=WP_010426220.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312448.1;locus_tag=VMS06_RS18300;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_010426220.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 4116 5018 . - . ID=gene-VMS06_RS18305;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=VMS06_RS18305 NZ_JAVXZI010000018.1 Protein Homology CDS 4116 5018 . - 0 ID=cds-WP_022646697.1;Parent=gene-VMS06_RS18305;Dbxref=GenBank:WP_022646697.1;Name=WP_022646697.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=VMS06_RS18305;product=dipeptide ABC transporter permease DppC;protein_id=WP_022646697.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 5028 6047 . - . ID=gene-VMS06_RS18310;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=VMS06_RS18310 NZ_JAVXZI010000018.1 Protein Homology CDS 5028 6047 . - 0 ID=cds-WP_022646696.1;Parent=gene-VMS06_RS18310;Dbxref=GenBank:WP_022646696.1;Name=WP_022646696.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=VMS06_RS18310;product=dipeptide ABC transporter permease DppB;protein_id=WP_022646696.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 6209 7816 . - . ID=gene-VMS06_RS18315;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=VMS06_RS18315 NZ_JAVXZI010000018.1 Protein Homology CDS 6209 7816 . - 0 ID=cds-WP_022646695.1;Parent=gene-VMS06_RS18315;Dbxref=GenBank:WP_022646695.1;Name=WP_022646695.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=VMS06_RS18315;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_022646695.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 8438 8514 . - . ID=gene-VMS06_RS18320;Name=VMS06_RS18320;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS18320 NZ_JAVXZI010000018.1 tRNAscan-SE tRNA 8438 8514 . - . ID=rna-VMS06_RS18320;Parent=gene-VMS06_RS18320;anticodon=(pos:complement(8478..8480));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18320;product=tRNA-Pro NZ_JAVXZI010000018.1 tRNAscan-SE exon 8438 8514 . - . ID=exon-VMS06_RS18320-1;Parent=rna-VMS06_RS18320;anticodon=(pos:complement(8478..8480));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18320;product=tRNA-Pro NZ_JAVXZI010000018.1 RefSeq gene 8606 10300 . - . ID=gene-VMS06_RS18325;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=VMS06_RS18325 NZ_JAVXZI010000018.1 Protein Homology CDS 8606 10300 . - 0 ID=cds-WP_022646694.1;Parent=gene-VMS06_RS18325;Dbxref=GenBank:WP_022646694.1;Name=WP_022646694.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426224.1;locus_tag=VMS06_RS18325;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_022646694.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 10540 11742 . - . ID=gene-VMS06_RS18330;Name=VMS06_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18330 NZ_JAVXZI010000018.1 Protein Homology CDS 10540 11742 . - 0 ID=cds-WP_023299065.1;Parent=gene-VMS06_RS18330;Dbxref=GenBank:WP_023299065.1;Name=WP_023299065.1;Ontology_term=GO:0015129;gbkey=CDS;go_function=lactate transmembrane transporter activity|0015129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001098078.1;locus_tag=VMS06_RS18330;product=L-lactate MFS transporter;protein_id=WP_023299065.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 11979 12521 . - . ID=gene-VMS06_RS18335;Name=VMS06_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18335 NZ_JAVXZI010000018.1 Protein Homology CDS 11979 12521 . - 0 ID=cds-WP_023299064.1;Parent=gene-VMS06_RS18335;Dbxref=GenBank:WP_023299064.1;Name=WP_023299064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015569983.1;locus_tag=VMS06_RS18335;product=lipase;protein_id=WP_023299064.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 12682 13263 . + . ID=gene-VMS06_RS18340;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=VMS06_RS18340 NZ_JAVXZI010000018.1 Protein Homology CDS 12682 13263 . + 0 ID=cds-WP_022646691.1;Parent=gene-VMS06_RS18340;Dbxref=GenBank:WP_022646691.1;Name=WP_022646691.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915440.1;locus_tag=VMS06_RS18340;product=DNA-3-methyladenine glycosylase I;protein_id=WP_022646691.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 13241 13681 . + . ID=gene-VMS06_RS18345;Name=VMS06_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18345 NZ_JAVXZI010000018.1 Protein Homology CDS 13241 13681 . + 0 ID=cds-WP_022646690.1;Parent=gene-VMS06_RS18345;Dbxref=GenBank:WP_022646690.1;Name=WP_022646690.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882637.1;locus_tag=VMS06_RS18345;product=N-acetyltransferase;protein_id=WP_022646690.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 13650 16019 . - . ID=gene-VMS06_RS18350;Name=VMS06_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18350 NZ_JAVXZI010000018.1 Protein Homology CDS 13650 16019 . - 0 ID=cds-WP_063148236.1;Parent=gene-VMS06_RS18350;Dbxref=GenBank:WP_063148236.1;Name=WP_063148236.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015569986.1;locus_tag=VMS06_RS18350;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_063148236.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 16142 16804 . + . ID=gene-VMS06_RS18355;Name=VMS06_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18355 NZ_JAVXZI010000018.1 Protein Homology CDS 16142 16804 . + 0 ID=cds-WP_022646688.1;Parent=gene-VMS06_RS18355;Dbxref=GenBank:WP_022646688.1;Name=WP_022646688.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462546.1;locus_tag=VMS06_RS18355;product=OmpA family lipoprotein;protein_id=WP_022646688.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 16963 17979 . + . ID=gene-VMS06_RS18360;Name=VMS06_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18360 NZ_JAVXZI010000018.1 Protein Homology CDS 16963 17979 . + 0 ID=cds-WP_023305241.1;Parent=gene-VMS06_RS18360;Dbxref=GenBank:WP_023305241.1;Name=WP_023305241.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003837718.1;locus_tag=VMS06_RS18360;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_023305241.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 18082 18831 . + . ID=gene-VMS06_RS18365;Name=VMS06_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18365 NZ_JAVXZI010000018.1 Protein Homology CDS 18082 18831 . + 0 ID=cds-WP_063148235.1;Parent=gene-VMS06_RS18365;Dbxref=GenBank:WP_063148235.1;Name=WP_063148235.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882048.1;locus_tag=VMS06_RS18365;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_063148235.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 18835 19773 . + . ID=gene-VMS06_RS18370;Name=VMS06_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18370 NZ_JAVXZI010000018.1 Protein Homology CDS 18835 19773 . + 0 ID=cds-WP_063148234.1;Parent=gene-VMS06_RS18370;Dbxref=GenBank:WP_063148234.1;Name=WP_063148234.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383575.1;locus_tag=VMS06_RS18370;product=sugar kinase;protein_id=WP_063148234.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 19891 21171 . + . ID=gene-VMS06_RS18375;Name=VMS06_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18375 NZ_JAVXZI010000018.1 Protein Homology CDS 19891 21171 . + 0 ID=cds-WP_001089079.1;Parent=gene-VMS06_RS18375;Dbxref=GenBank:WP_001089079.1;Name=WP_001089079.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229373.1;locus_tag=VMS06_RS18375;product=MFS transporter;protein_id=WP_001089079.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 21198 22172 . + . ID=gene-VMS06_RS18380;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=VMS06_RS18380 NZ_JAVXZI010000018.1 Protein Homology CDS 21198 22172 . + 0 ID=cds-WP_022646684.1;Parent=gene-VMS06_RS18380;Dbxref=GenBank:WP_022646684.1;Name=WP_022646684.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426252.1;locus_tag=VMS06_RS18380;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_022646684.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 22231 22443 . - . ID=gene-VMS06_RS18385;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=VMS06_RS18385 NZ_JAVXZI010000018.1 Protein Homology CDS 22231 22443 . - 0 ID=cds-WP_003860775.1;Parent=gene-VMS06_RS18385;Dbxref=GenBank:WP_003860775.1;Name=WP_003860775.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=VMS06_RS18385;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_003860775.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 22687 23397 . - . ID=gene-VMS06_RS18390;Name=VMS06_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18390 NZ_JAVXZI010000018.1 Protein Homology CDS 22687 23397 . - 0 ID=cds-WP_023299059.1;Parent=gene-VMS06_RS18390;Dbxref=GenBank:WP_023299059.1;Name=WP_023299059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462548.1;locus_tag=VMS06_RS18390;product=DUF3053 domain-containing protein;protein_id=WP_023299059.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 23728 24015 . + . ID=gene-VMS06_RS18395;Name=VMS06_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18395 NZ_JAVXZI010000018.1 Protein Homology CDS 23728 24015 . + 0 ID=cds-WP_003860776.1;Parent=gene-VMS06_RS18395;Dbxref=GenBank:WP_003860776.1;Name=WP_003860776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882043.1;locus_tag=VMS06_RS18395;product=HTH-type transcriptional regulator;protein_id=WP_003860776.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 24054 25673 . - . ID=gene-VMS06_RS18400;Name=VMS06_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18400 NZ_JAVXZI010000018.1 Protein Homology CDS 24054 25673 . - 0 ID=cds-WP_063148232.1;Parent=gene-VMS06_RS18400;Dbxref=GenBank:WP_063148232.1;Name=WP_063148232.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694737.1;locus_tag=VMS06_RS18400;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_063148232.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 25891 26592 . - . ID=gene-VMS06_RS18405;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=VMS06_RS18405 NZ_JAVXZI010000018.1 Protein Homology CDS 25891 26592 . - 0 ID=cds-WP_003860778.1;Parent=gene-VMS06_RS18405;Dbxref=GenBank:WP_003860778.1;Name=WP_003860778.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462864.1;locus_tag=VMS06_RS18405;product=NAD(P)H-flavin reductase;protein_id=WP_003860778.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 26632 28125 . - . ID=gene-VMS06_RS18410;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=VMS06_RS18410 NZ_JAVXZI010000018.1 Protein Homology CDS 26632 28125 . - 0 ID=cds-WP_088581798.1;Parent=gene-VMS06_RS18410;Dbxref=GenBank:WP_088581798.1;Name=WP_088581798.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072245.1;locus_tag=VMS06_RS18410;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_088581798.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 28298 28789 . + . ID=gene-VMS06_RS18415;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=VMS06_RS18415 NZ_JAVXZI010000018.1 Protein Homology CDS 28298 28789 . + 0 ID=cds-WP_032626529.1;Parent=gene-VMS06_RS18415;Dbxref=GenBank:WP_032626529.1;Name=WP_032626529.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462862.1;locus_tag=VMS06_RS18415;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_032626529.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 28786 29568 . - . ID=gene-VMS06_RS18420;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=VMS06_RS18420 NZ_JAVXZI010000018.1 Protein Homology CDS 28786 29568 . - 0 ID=cds-WP_032626531.1;Parent=gene-VMS06_RS18420;Dbxref=GenBank:WP_032626531.1;Name=WP_032626531.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860781.1;locus_tag=VMS06_RS18420;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_032626531.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 29610 30380 . - . ID=gene-VMS06_RS18425;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=VMS06_RS18425 NZ_JAVXZI010000018.1 Protein Homology CDS 29610 30380 . - 0 ID=cds-WP_022646678.1;Parent=gene-VMS06_RS18425;Dbxref=GenBank:WP_022646678.1;Name=WP_022646678.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960915.1;locus_tag=VMS06_RS18425;product=Sec-independent protein translocase subunit TatC;protein_id=WP_022646678.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 30383 30925 . - . ID=gene-VMS06_RS18430;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=VMS06_RS18430 NZ_JAVXZI010000018.1 Protein Homology CDS 30383 30925 . - 0 ID=cds-WP_022646677.1;Parent=gene-VMS06_RS18430;Dbxref=GenBank:WP_022646677.1;Name=WP_022646677.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462859.1;locus_tag=VMS06_RS18430;product=Sec-independent protein translocase protein TatB;protein_id=WP_022646677.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 30929 31183 . - . ID=gene-VMS06_RS18435;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=VMS06_RS18435 NZ_JAVXZI010000018.1 Protein Homology CDS 30929 31183 . - 0 ID=cds-WP_022646676.1;Parent=gene-VMS06_RS18435;Dbxref=GenBank:WP_022646676.1;Name=WP_022646676.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312793.1;locus_tag=VMS06_RS18435;product=Sec-independent protein translocase subunit TatA;protein_id=WP_022646676.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 31260 32900 . - . ID=gene-VMS06_RS18440;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=VMS06_RS18440 NZ_JAVXZI010000018.1 Protein Homology CDS 31260 32900 . - 0 ID=cds-WP_063148231.1;Parent=gene-VMS06_RS18440;Dbxref=GenBank:WP_063148231.1;Name=WP_063148231.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462857.1;locus_tag=VMS06_RS18440;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_063148231.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 32897 33502 . - . ID=gene-VMS06_RS18445;Name=ubiJ;gbkey=Gene;gene=ubiJ;gene_biotype=protein_coding;locus_tag=VMS06_RS18445 NZ_JAVXZI010000018.1 Protein Homology CDS 32897 33502 . - 0 ID=cds-WP_022646674.1;Parent=gene-VMS06_RS18445;Dbxref=GenBank:WP_022646674.1;Name=WP_022646674.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiJ;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418278.1;locus_tag=VMS06_RS18445;product=ubiquinone biosynthesis protein UbiJ;protein_id=WP_022646674.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 33516 34271 . - . ID=gene-VMS06_RS18450;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=VMS06_RS18450 NZ_JAVXZI010000018.1 Protein Homology CDS 33516 34271 . - 0 ID=cds-WP_022646673.1;Parent=gene-VMS06_RS18450;Dbxref=GenBank:WP_022646673.1;Name=WP_022646673.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312790.1;locus_tag=VMS06_RS18450;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_022646673.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 34338 35795 . - . ID=gene-VMS06_RS18455;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=VMS06_RS18455 NZ_JAVXZI010000018.1 Protein Homology CDS 34338 35795 . - 0 ID=cds-WP_063148230.1;Parent=gene-VMS06_RS18455;Dbxref=GenBank:WP_063148230.1;Name=WP_063148230.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833697.1;locus_tag=VMS06_RS18455;product=DNA recombination protein RmuC;protein_id=WP_063148230.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 35935 36696 . - . ID=gene-VMS06_RS18460;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=VMS06_RS18460 NZ_JAVXZI010000018.1 Protein Homology CDS 35935 36696 . - 0 ID=cds-WP_003860792.1;Parent=gene-VMS06_RS18460;Dbxref=GenBank:WP_003860792.1;Name=WP_003860792.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462853.1;locus_tag=VMS06_RS18460;product=uridine phosphorylase;protein_id=WP_003860792.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 36956 37762 . + . ID=gene-VMS06_RS18465;Name=VMS06_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18465 NZ_JAVXZI010000018.1 Protein Homology CDS 36956 37762 . + 0 ID=cds-WP_023299052.1;Parent=gene-VMS06_RS18465;Dbxref=GenBank:WP_023299052.1;Name=WP_023299052.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501527.1;locus_tag=VMS06_RS18465;product=dienelactone hydrolase family protein;protein_id=WP_023299052.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 37810 40071 . - . ID=gene-VMS06_RS18470;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=VMS06_RS18470 NZ_JAVXZI010000018.1 Protein Homology CDS 37810 40071 . - 0 ID=cds-WP_063148229.1;Parent=gene-VMS06_RS18470;Dbxref=GenBank:WP_063148229.1;Name=WP_063148229.1;Ontology_term=GO:0008652,GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020235996.1;locus_tag=VMS06_RS18470;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_063148229.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 40187 41140 . + . ID=gene-VMS06_RS18475;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=VMS06_RS18475 NZ_JAVXZI010000018.1 Protein Homology CDS 40187 41140 . + 0 ID=cds-WP_015570000.1;Parent=gene-VMS06_RS18475;Dbxref=GenBank:WP_015570000.1;Name=WP_015570000.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013099245.1;locus_tag=VMS06_RS18475;product=HTH-type transcriptional regulator MetR;protein_id=WP_015570000.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 41028 41927 . - . ID=gene-VMS06_RS18480;Name=VMS06_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18480 NZ_JAVXZI010000018.1 Protein Homology CDS 41028 41927 . - 0 ID=cds-WP_063843892.1;Parent=gene-VMS06_RS18480;Dbxref=GenBank:WP_063843892.1;Name=WP_063843892.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224469.1;locus_tag=VMS06_RS18480;product=carboxylate/amino acid/amine transporter;protein_id=WP_063843892.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 42010 42810 . - . ID=gene-VMS06_RS18485;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=VMS06_RS18485 NZ_JAVXZI010000018.1 Protein Homology CDS 42010 42810 . - 0 ID=cds-WP_023299050.1;Parent=gene-VMS06_RS18485;Dbxref=GenBank:WP_023299050.1;Name=WP_023299050.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426280.1;locus_tag=VMS06_RS18485;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_023299050.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 42842 43834 . - . ID=gene-VMS06_RS18490;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=VMS06_RS18490 NZ_JAVXZI010000018.1 Protein Homology CDS 42842 43834 . - 0 ID=cds-WP_022646668.1;Parent=gene-VMS06_RS18490;Dbxref=GenBank:WP_022646668.1;Name=WP_022646668.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812362.1;locus_tag=VMS06_RS18490;product=lysophospholipase L2;protein_id=WP_022646668.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 43946 44566 . + . ID=gene-VMS06_RS18495;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=VMS06_RS18495 NZ_JAVXZI010000018.1 Protein Homology CDS 43946 44566 . + 0 ID=cds-WP_006812363.1;Parent=gene-VMS06_RS18495;Dbxref=GenBank:WP_006812363.1;Name=WP_006812363.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224466.1;locus_tag=VMS06_RS18495;product=homoserine/homoserine lactone efflux protein;protein_id=WP_006812363.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 44563 45183 . - . ID=gene-VMS06_RS18500;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=VMS06_RS18500 NZ_JAVXZI010000018.1 Protein Homology CDS 44563 45183 . - 0 ID=cds-WP_006179256.1;Parent=gene-VMS06_RS18500;Dbxref=GenBank:WP_006179256.1;Name=WP_006179256.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224464.1;locus_tag=VMS06_RS18500;product=threonine export protein RhtC;protein_id=WP_006179256.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 45245 47074 . - . ID=gene-VMS06_RS18505;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=VMS06_RS18505 NZ_JAVXZI010000018.1 Protein Homology CDS 45245 47074 . - 0 ID=cds-WP_032626543.1;Parent=gene-VMS06_RS18505;Dbxref=GenBank:WP_032626543.1;Name=WP_032626543.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026263.3;locus_tag=VMS06_RS18505;product=ATP-dependent DNA helicase RecQ;protein_id=WP_032626543.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 47165 48034 . - . ID=gene-VMS06_RS18510;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=VMS06_RS18510 NZ_JAVXZI010000018.1 Protein Homology CDS 47165 48034 . - 0 ID=cds-WP_022646666.1;Parent=gene-VMS06_RS18510;Dbxref=GenBank:WP_022646666.1;Name=WP_022646666.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=glycerophospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462842.1;locus_tag=VMS06_RS18510;product=phospholipase A;protein_id=WP_022646666.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 48195 48662 . + . ID=gene-VMS06_RS18515;Name=yigI;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=VMS06_RS18515 NZ_JAVXZI010000018.1 Protein Homology CDS 48195 48662 . + 0 ID=cds-WP_006812366.1;Parent=gene-VMS06_RS18515;Dbxref=GenBank:WP_006812366.1;Name=WP_006812366.1;gbkey=CDS;gene=yigI;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312777.2;locus_tag=VMS06_RS18515;product=acyl-CoA thioesterase YigI;protein_id=WP_006812366.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 48714 49610 . + . ID=gene-VMS06_RS18520;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=VMS06_RS18520 NZ_JAVXZI010000018.1 Protein Homology CDS 48714 49610 . + 0 ID=cds-WP_023299047.1;Parent=gene-VMS06_RS18520;Dbxref=GenBank:WP_023299047.1;Name=WP_023299047.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006816603.1;locus_tag=VMS06_RS18520;product=EamA family transporter RarD;protein_id=WP_023299047.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 49654 50604 . - . ID=gene-VMS06_RS18525;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=VMS06_RS18525 NZ_JAVXZI010000018.1 Protein Homology CDS 49654 50604 . - 0 ID=cds-WP_003860807.1;Parent=gene-VMS06_RS18525;Dbxref=GenBank:WP_003860807.1;Name=WP_003860807.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=VMS06_RS18525;product=magnesium/cobalt transporter CorA;protein_id=WP_003860807.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 50755 50811 . - . ID=gene-VMS06_RS18530;Name=ysgD;gbkey=Gene;gene=ysgD;gene_biotype=protein_coding;locus_tag=VMS06_RS18530 NZ_JAVXZI010000018.1 Protein Homology CDS 50755 50811 . - 0 ID=cds-WP_212743980.1;Parent=gene-VMS06_RS18530;Dbxref=GenBank:WP_212743980.1;Name=WP_212743980.1;gbkey=CDS;gene=ysgD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_010051213.1;locus_tag=VMS06_RS18530;product=YsgD/CorL family protein;protein_id=WP_212743980.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 50961 53123 . - . ID=gene-VMS06_RS18535;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=VMS06_RS18535 NZ_JAVXZI010000018.1 Protein Homology CDS 50961 53123 . - 0 ID=cds-WP_017383586.1;Parent=gene-VMS06_RS18535;Dbxref=GenBank:WP_017383586.1;Name=WP_017383586.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418258.1;locus_tag=VMS06_RS18535;product=DNA helicase II;protein_id=WP_017383586.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 53203 53919 . - . ID=gene-VMS06_RS18540;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=VMS06_RS18540 NZ_JAVXZI010000018.1 Protein Homology CDS 53203 53919 . - 0 ID=cds-WP_022646664.1;Parent=gene-VMS06_RS18540;Dbxref=GenBank:WP_022646664.1;Name=WP_022646664.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312769.1;locus_tag=VMS06_RS18540;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_022646664.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 53919 54821 . - . ID=gene-VMS06_RS18545;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=VMS06_RS18545 NZ_JAVXZI010000018.1 Protein Homology CDS 53919 54821 . - 0 ID=cds-WP_022646663.1;Parent=gene-VMS06_RS18545;Dbxref=GenBank:WP_022646663.1;Name=WP_022646663.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462834.1;locus_tag=VMS06_RS18545;product=tyrosine recombinase XerC;protein_id=WP_022646663.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 54818 55525 . - . ID=gene-VMS06_RS18550;Name=VMS06_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18550 NZ_JAVXZI010000018.1 Protein Homology CDS 54818 55525 . - 0 ID=cds-WP_023295731.1;Parent=gene-VMS06_RS18550;Dbxref=GenBank:WP_023295731.1;Name=WP_023295731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462833.1;locus_tag=VMS06_RS18550;product=DUF484 domain-containing protein;protein_id=WP_023295731.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 55522 56346 . - . ID=gene-VMS06_RS18555;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=VMS06_RS18555 NZ_JAVXZI010000018.1 Protein Homology CDS 55522 56346 . - 0 ID=cds-WP_023299045.1;Parent=gene-VMS06_RS18555;Dbxref=GenBank:WP_023299045.1;Name=WP_023299045.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=VMS06_RS18555;product=diaminopimelate epimerase;protein_id=WP_023299045.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 56382 56585 . - . ID=gene-VMS06_RS18560;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=VMS06_RS18560 NZ_JAVXZI010000018.1 Protein Homology CDS 56382 56585 . - 0 ID=cds-WP_006812373.1;Parent=gene-VMS06_RS18560;Dbxref=GenBank:WP_006812373.1;Name=WP_006812373.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860815.1;locus_tag=VMS06_RS18560;product=LPS translocon maturation chaperone LptM;protein_id=WP_006812373.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 56721 57041 . + . ID=gene-VMS06_RS18565;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=VMS06_RS18565 NZ_JAVXZI010000018.1 Protein Homology CDS 56721 57041 . + 0 ID=cds-WP_047726385.1;Parent=gene-VMS06_RS18565;Dbxref=GenBank:WP_047726385.1;Name=WP_047726385.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=VMS06_RS18565;product=iron donor protein CyaY;protein_id=WP_047726385.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 57179 59722 . - . ID=gene-VMS06_RS18570;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=VMS06_RS18570 NZ_JAVXZI010000018.1 Protein Homology CDS 57179 59722 . - 0 ID=cds-WP_022646660.1;Parent=gene-VMS06_RS18570;Dbxref=GenBank:WP_022646660.1;Name=WP_022646660.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312763.1;locus_tag=VMS06_RS18570;product=class I adenylate cyclase;protein_id=WP_022646660.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 60072 61013 . + . ID=gene-VMS06_RS18575;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=VMS06_RS18575 NZ_JAVXZI010000018.1 Protein Homology CDS 60072 61013 . + 0 ID=cds-WP_063843893.1;Parent=gene-VMS06_RS18575;Dbxref=GenBank:WP_063843893.1;Name=WP_063843893.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026260.1;locus_tag=VMS06_RS18575;product=hydroxymethylbilane synthase;protein_id=WP_063843893.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 61010 61750 . + . ID=gene-VMS06_RS18580;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=VMS06_RS18580 NZ_JAVXZI010000018.1 Protein Homology CDS 61010 61750 . + 0 ID=cds-WP_023299041.1;Parent=gene-VMS06_RS18580;Dbxref=GenBank:WP_023299041.1;Name=WP_023299041.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462823.1;locus_tag=VMS06_RS18580;product=uroporphyrinogen-III synthase;protein_id=WP_023299041.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 61771 62964 . + . ID=gene-VMS06_RS18585;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=VMS06_RS18585 NZ_JAVXZI010000018.1 Protein Homology CDS 61771 62964 . + 0 ID=cds-WP_022646657.1;Parent=gene-VMS06_RS18585;Dbxref=GenBank:WP_022646657.1;Name=WP_022646657.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426327.1;locus_tag=VMS06_RS18585;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_022646657.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 62967 64166 . + . ID=gene-VMS06_RS18590;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=VMS06_RS18590 NZ_JAVXZI010000018.1 Protein Homology CDS 62967 64166 . + 0 ID=cds-WP_032622057.1;Parent=gene-VMS06_RS18590;Dbxref=GenBank:WP_032622057.1;Name=WP_032622057.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013099267.1;locus_tag=VMS06_RS18590;product=protoheme IX biogenesis protein HemY;protein_id=WP_032622057.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 64705 64781 . - . ID=gene-VMS06_RS18595;Name=VMS06_RS18595;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS18595 NZ_JAVXZI010000018.1 tRNAscan-SE tRNA 64705 64781 . - . ID=rna-VMS06_RS18595;Parent=gene-VMS06_RS18595;anticodon=(pos:complement(64745..64747));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18595;product=tRNA-Pro NZ_JAVXZI010000018.1 tRNAscan-SE exon 64705 64781 . - . ID=exon-VMS06_RS18595-1;Parent=rna-VMS06_RS18595;anticodon=(pos:complement(64745..64747));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18595;product=tRNA-Pro NZ_JAVXZI010000018.1 RefSeq gene 64826 64912 . - . ID=gene-VMS06_RS18600;Name=VMS06_RS18600;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS18600 NZ_JAVXZI010000018.1 tRNAscan-SE tRNA 64826 64912 . - . ID=rna-VMS06_RS18600;Parent=gene-VMS06_RS18600;anticodon=(pos:complement(64876..64878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18600;product=tRNA-Leu NZ_JAVXZI010000018.1 tRNAscan-SE exon 64826 64912 . - . ID=exon-VMS06_RS18600-1;Parent=rna-VMS06_RS18600;anticodon=(pos:complement(64876..64878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18600;product=tRNA-Leu NZ_JAVXZI010000018.1 RefSeq gene 64934 65009 . - . ID=gene-VMS06_RS18605;Name=VMS06_RS18605;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS18605 NZ_JAVXZI010000018.1 tRNAscan-SE tRNA 64934 65009 . - . ID=rna-VMS06_RS18605;Parent=gene-VMS06_RS18605;anticodon=(pos:complement(64974..64976));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18605;product=tRNA-His NZ_JAVXZI010000018.1 tRNAscan-SE exon 64934 65009 . - . ID=exon-VMS06_RS18605-1;Parent=rna-VMS06_RS18605;anticodon=(pos:complement(64974..64976));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18605;product=tRNA-His NZ_JAVXZI010000018.1 RefSeq gene 65077 65153 . - . ID=gene-VMS06_RS18610;Name=VMS06_RS18610;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS18610 NZ_JAVXZI010000018.1 tRNAscan-SE tRNA 65077 65153 . - . ID=rna-VMS06_RS18610;Parent=gene-VMS06_RS18610;anticodon=(pos:complement(65117..65119));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18610;product=tRNA-Arg NZ_JAVXZI010000018.1 tRNAscan-SE exon 65077 65153 . - . ID=exon-VMS06_RS18610-1;Parent=rna-VMS06_RS18610;anticodon=(pos:complement(65117..65119));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18610;product=tRNA-Arg NZ_JAVXZI010000018.1 RefSeq gene 65256 66641 . - . ID=gene-VMS06_RS18615;Name=thrP;gbkey=Gene;gene=thrP;gene_biotype=protein_coding;gene_synonym=yifK;locus_tag=VMS06_RS18615 NZ_JAVXZI010000018.1 Protein Homology CDS 65256 66641 . - 0 ID=cds-WP_023305225.1;Parent=gene-VMS06_RS18615;Dbxref=GenBank:WP_023305225.1;Name=WP_023305225.1;Ontology_term=GO:0015194,GO:0015195;gbkey=CDS;gene=thrP;go_function=L-serine transmembrane transporter activity|0015194||IEA,L-threonine transmembrane transporter activity|0015195||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312756.1;locus_tag=VMS06_RS18615;product=bifunctional threonine/serine APC transporter ThrP;protein_id=WP_023305225.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 66839 67579 . - . ID=gene-VMS06_RS18620;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=VMS06_RS18620 NZ_JAVXZI010000018.1 Protein Homology CDS 66839 67579 . - 0 ID=cds-WP_046621716.1;Parent=gene-VMS06_RS18620;Dbxref=GenBank:WP_046621716.1;Name=WP_046621716.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418242.1;locus_tag=VMS06_RS18620;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_046621716.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 67592 68944 . - . ID=gene-VMS06_RS18625;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=VMS06_RS18625 NZ_JAVXZI010000018.1 Protein Homology CDS 67592 68944 . - 0 ID=cds-WP_017693948.1;Parent=gene-VMS06_RS18625;Dbxref=GenBank:WP_017693948.1;Name=WP_017693948.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812384.1;locus_tag=VMS06_RS18625;product=ECA oligosaccharide polymerase;protein_id=WP_017693948.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 68941 70020 . - . ID=gene-VMS06_RS18630;Name=VMS06_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18630 NZ_JAVXZI010000018.1 Protein Homology CDS 68941 70020 . - 0 ID=cds-WP_323630698.1;Parent=gene-VMS06_RS18630;Dbxref=GenBank:WP_323630698.1;Name=WP_323630698.1;Ontology_term=GO:0000271,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709597.1;locus_tag=VMS06_RS18630;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_323630698.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 70017 71267 . - . ID=gene-VMS06_RS18635;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=VMS06_RS18635 NZ_JAVXZI010000018.1 Protein Homology CDS 70017 71267 . - 0 ID=cds-WP_063148226.1;Parent=gene-VMS06_RS18635;Dbxref=GenBank:WP_063148226.1;Name=WP_063148226.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462816.1;locus_tag=VMS06_RS18635;product=lipid III flippase WzxE;protein_id=WP_063148226.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 71269 72399 . - . ID=gene-VMS06_RS18640;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=VMS06_RS18640 NZ_JAVXZI010000018.1 Protein Homology CDS 71269 72399 . - 0 ID=cds-WP_063148225.1;Parent=gene-VMS06_RS18640;Dbxref=GenBank:WP_063148225.1;Name=WP_063148225.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224438.1;locus_tag=VMS06_RS18640;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_063148225.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 72404 73081 . - . ID=gene-VMS06_RS18645;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=VMS06_RS18645 NZ_JAVXZI010000018.1 Protein Homology CDS 72404 73081 . - 0 ID=cds-WP_063148224.1;Parent=gene-VMS06_RS18645;Dbxref=GenBank:WP_063148224.1;Name=WP_063148224.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172151.1;locus_tag=VMS06_RS18645;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_063148224.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 73078 74340 . - . ID=gene-VMS06_RS18650;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=VMS06_RS18650 NZ_JAVXZI010000018.1 Protein Homology CDS 73078 74340 . - 0 ID=cds-WP_023299034.1;Parent=gene-VMS06_RS18650;Dbxref=GenBank:WP_023299034.1;Name=WP_023299034.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312747.1;locus_tag=VMS06_RS18650;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_023299034.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 74337 75467 . - . ID=gene-VMS06_RS18655;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=VMS06_RS18655 NZ_JAVXZI010000018.1 Protein Homology CDS 74337 75467 . - 0 ID=cds-WP_032622055.1;Parent=gene-VMS06_RS18655;Dbxref=GenBank:WP_032622055.1;Name=WP_032622055.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462810.1;locus_tag=VMS06_RS18655;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_032622055.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 75524 76570 . - . ID=gene-VMS06_RS18660;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=VMS06_RS18660 NZ_JAVXZI010000018.1 Protein Homology CDS 75524 76570 . - 0 ID=cds-WP_022646646.1;Parent=gene-VMS06_RS18660;Dbxref=GenBank:WP_022646646.1;Name=WP_022646646.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693953.1;locus_tag=VMS06_RS18660;product=ECA polysaccharide chain length modulation protein;protein_id=WP_022646646.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 76584 77687 . - . ID=gene-VMS06_RS18665;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=VMS06_RS18665 NZ_JAVXZI010000018.1 Protein Homology CDS 76584 77687 . - 0 ID=cds-WP_045621327.1;Parent=gene-VMS06_RS18665;Dbxref=GenBank:WP_045621327.1;Name=WP_045621327.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437992.1;locus_tag=VMS06_RS18665;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_045621327.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 77928 79187 . - . ID=gene-VMS06_RS18670;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=VMS06_RS18670 NZ_JAVXZI010000018.1 Protein Homology CDS 77928 79187 . - 0 ID=cds-WP_001054528.1;Parent=gene-VMS06_RS18670;Dbxref=GenBank:WP_001054528.1;Name=WP_001054528.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=VMS06_RS18670;product=transcription termination factor Rho;protein_id=WP_001054528.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 79529 79858 . - . ID=gene-VMS06_RS18675;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=VMS06_RS18675 NZ_JAVXZI010000018.1 Protein Homology CDS 79529 79858 . - 0 ID=cds-WP_006812392.1;Parent=gene-VMS06_RS18675;Dbxref=GenBank:WP_006812392.1;Name=WP_006812392.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=VMS06_RS18675;product=thioredoxin TrxA;protein_id=WP_006812392.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 80003 81271 . + . ID=gene-VMS06_RS18680;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=VMS06_RS18680 NZ_JAVXZI010000018.1 Protein Homology CDS 80003 81271 . + 0 ID=cds-WP_022646644.1;Parent=gene-VMS06_RS18680;Dbxref=GenBank:WP_022646644.1;Name=WP_022646644.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418227.1;locus_tag=VMS06_RS18680;product=ATP-dependent RNA helicase RhlB;protein_id=WP_022646644.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 81278 82762 . + . ID=gene-VMS06_RS18685;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=VMS06_RS18685 NZ_JAVXZI010000018.1 Protein Homology CDS 81278 82762 . + 0 ID=cds-WP_038416966.1;Parent=gene-VMS06_RS18685;Dbxref=GenBank:WP_038416966.1;Name=WP_038416966.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882895.1;locus_tag=VMS06_RS18685;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_038416966.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 82815 84839 . - . ID=gene-VMS06_RS18690;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=VMS06_RS18690 NZ_JAVXZI010000018.1 Protein Homology CDS 82815 84839 . - 0 ID=cds-WP_022646642.1;Parent=gene-VMS06_RS18690;Dbxref=GenBank:WP_022646642.1;Name=WP_022646642.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383603.1;locus_tag=VMS06_RS18690;product=DNA helicase Rep;protein_id=WP_022646642.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 84925 85206 . + . ID=gene-VMS06_RS18695;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=VMS06_RS18695 NZ_JAVXZI010000018.1 Protein Homology CDS 84925 85206 . + 0 ID=cds-WP_006812396.1;Parent=gene-VMS06_RS18695;Dbxref=GenBank:WP_006812396.1;Name=WP_006812396.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004097481.1;locus_tag=VMS06_RS18695;product=peptidylprolyl isomerase PpiC;protein_id=WP_006812396.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 85261 86082 . - . ID=gene-VMS06_RS18700;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=VMS06_RS18700 NZ_JAVXZI010000018.1 Protein Homology CDS 85261 86082 . - 0 ID=cds-WP_022646641.1;Parent=gene-VMS06_RS18700;Dbxref=GenBank:WP_022646641.1;Name=WP_022646641.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process from L-serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=VMS06_RS18700;product=serine O-acetyltransferase;protein_id=WP_022646641.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 86158 87177 . - . ID=gene-VMS06_RS18705;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=VMS06_RS18705 NZ_JAVXZI010000018.1 Protein Homology CDS 86158 87177 . - 0 ID=cds-WP_006812398.1;Parent=gene-VMS06_RS18705;Dbxref=GenBank:WP_006812398.1;Name=WP_006812398.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312513.1;locus_tag=VMS06_RS18705;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_006812398.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 87177 87644 . - . ID=gene-VMS06_RS18710;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=VMS06_RS18710 NZ_JAVXZI010000018.1 Protein Homology CDS 87177 87644 . - 0 ID=cds-WP_003860835.1;Parent=gene-VMS06_RS18710;Dbxref=GenBank:WP_003860835.1;Name=WP_003860835.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=VMS06_RS18710;product=protein-export chaperone SecB;protein_id=WP_003860835.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 87676 87927 . - . ID=gene-VMS06_RS18715;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=VMS06_RS18715 NZ_JAVXZI010000018.1 Protein Homology CDS 87676 87927 . - 0 ID=cds-WP_063148223.1;Parent=gene-VMS06_RS18715;Dbxref=GenBank:WP_063148223.1;Name=WP_063148223.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016538905.1;locus_tag=VMS06_RS18715;product=glutaredoxin 3;protein_id=WP_063148223.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 87939 88370 . - . ID=gene-VMS06_RS18720;Name=VMS06_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18720 NZ_JAVXZI010000018.1 Protein Homology CDS 87939 88370 . - 0 ID=cds-WP_003860840.1;Parent=gene-VMS06_RS18720;Dbxref=GenBank:WP_003860840.1;Name=WP_003860840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462603.1;locus_tag=VMS06_RS18720;product=rhodanese-like domain-containing protein;protein_id=WP_003860840.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 88619 90163 . + . ID=gene-VMS06_RS18725;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=VMS06_RS18725 NZ_JAVXZI010000018.1 Protein Homology CDS 88619 90163 . + 0 ID=cds-WP_048966556.1;Parent=gene-VMS06_RS18725;Dbxref=GenBank:WP_048966556.1;Name=WP_048966556.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312517.1;locus_tag=VMS06_RS18725;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_048966556.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 90197 91456 . + . ID=gene-VMS06_RS18730;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=VMS06_RS18730 NZ_JAVXZI010000018.1 Protein Homology CDS 90197 91456 . + 0 ID=cds-WP_230259580.1;Parent=gene-VMS06_RS18730;Dbxref=GenBank:WP_230259580.1;Name=WP_230259580.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709392.4;locus_tag=VMS06_RS18730;product=murein hydrolase activator EnvC;protein_id=WP_230259580.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 91460 92392 . + . ID=gene-VMS06_RS18735;Name=VMS06_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18735 NZ_JAVXZI010000018.1 Protein Homology CDS 91460 92392 . + 0 ID=cds-WP_063148222.1;Parent=gene-VMS06_RS18735;Dbxref=GenBank:WP_063148222.1;Name=WP_063148222.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693955.1;locus_tag=VMS06_RS18735;product=divergent polysaccharide deacetylase family protein;protein_id=WP_063148222.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 92404 93204 . - . ID=gene-VMS06_RS18740;Name=VMS06_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18740 NZ_JAVXZI010000018.1 Protein Homology CDS 92404 93204 . - 0 ID=cds-WP_323630699.1;Parent=gene-VMS06_RS18740;Dbxref=GenBank:WP_323630699.1;Name=WP_323630699.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502710.1;locus_tag=VMS06_RS18740;product=glycosyltransferase family 2 protein;protein_id=WP_323630699.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 93411 94616 . + . ID=gene-VMS06_RS18745;Name=VMS06_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18745 NZ_JAVXZI010000018.1 Protein Homology CDS 93411 94616 . + 0 ID=cds-WP_022646636.1;Parent=gene-VMS06_RS18745;Dbxref=GenBank:WP_022646636.1;Name=WP_022646636.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882003.1;locus_tag=VMS06_RS18745;product=glycosyltransferase;protein_id=WP_022646636.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 94632 95546 . + . ID=gene-VMS06_RS18750;Name=VMS06_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18750 NZ_JAVXZI010000018.1 Protein Homology CDS 94632 95546 . + 0 ID=cds-WP_023305215.1;Parent=gene-VMS06_RS18750;Dbxref=GenBank:WP_023305215.1;Name=WP_023305215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882674.1;locus_tag=VMS06_RS18750;product=hypothetical protein;protein_id=WP_023305215.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 95573 96601 . - . ID=gene-VMS06_RS18755;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=VMS06_RS18755 NZ_JAVXZI010000018.1 Protein Homology CDS 95573 96601 . - 0 ID=cds-WP_017383610.1;Parent=gene-VMS06_RS18755;Dbxref=GenBank:WP_017383610.1;Name=WP_017383610.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177738.1;locus_tag=VMS06_RS18755;product=L-threonine 3-dehydrogenase;protein_id=WP_017383610.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 96611 97807 . - . ID=gene-VMS06_RS18760;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=VMS06_RS18760 NZ_JAVXZI010000018.1 Protein Homology CDS 96611 97807 . - 0 ID=cds-WP_015570030.1;Parent=gene-VMS06_RS18760;Dbxref=GenBank:WP_015570030.1;Name=WP_015570030.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239151.1;locus_tag=VMS06_RS18760;product=glycine C-acetyltransferase;protein_id=WP_015570030.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 98023 99003 . + . ID=gene-VMS06_RS18765;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=VMS06_RS18765 NZ_JAVXZI010000018.1 Protein Homology CDS 98023 99003 . + 0 ID=cds-WP_022646634.1;Parent=gene-VMS06_RS18765;Dbxref=GenBank:WP_022646634.1;Name=WP_022646634.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012908140.1;locus_tag=VMS06_RS18765;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_022646634.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 99083 100129 . + . ID=gene-VMS06_RS18770;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=VMS06_RS18770 NZ_JAVXZI010000018.1 Protein Homology CDS 99083 100129 . + 0 ID=cds-WP_063148220.1;Parent=gene-VMS06_RS18770;Dbxref=GenBank:WP_063148220.1;Name=WP_063148220.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570031.1;locus_tag=VMS06_RS18770;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_063148220.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 100133 101116 . + . ID=gene-VMS06_RS18775;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=VMS06_RS18775 NZ_JAVXZI010000018.1 Protein Homology CDS 100133 101116 . + 0 ID=cds-WP_022646632.1;Parent=gene-VMS06_RS18775;Dbxref=GenBank:WP_022646632.1;Name=WP_022646632.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812408.1;locus_tag=VMS06_RS18775;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_022646632.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 101120 102229 . + . ID=gene-VMS06_RS18780;Name=VMS06_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18780 NZ_JAVXZI010000018.1 Protein Homology CDS 101120 102229 . + 0 ID=cds-WP_022646631.1;Parent=gene-VMS06_RS18780;Dbxref=GenBank:WP_022646631.1;Name=WP_022646631.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426393.1;locus_tag=VMS06_RS18780;product=glycosyltransferase family 9 protein;protein_id=WP_022646631.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 102235 103134 . + . ID=gene-VMS06_RS18785;Name=VMS06_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18785 NZ_JAVXZI010000018.1 Protein Homology CDS 102235 103134 . + 0 ID=cds-WP_023305212.1;Parent=gene-VMS06_RS18785;Dbxref=GenBank:WP_023305212.1;Name=WP_023305212.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383613.1;locus_tag=VMS06_RS18785;product=glycosyltransferase family 2 protein;protein_id=WP_023305212.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 103122 104333 . + . ID=gene-VMS06_RS18790;Name=VMS06_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18790 NZ_JAVXZI010000018.1 Protein Homology CDS 103122 104333 . + 0 ID=cds-WP_063148219.1;Parent=gene-VMS06_RS18790;Dbxref=GenBank:WP_063148219.1;Name=WP_063148219.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570034.1;locus_tag=VMS06_RS18790;product=O-antigen ligase family protein;protein_id=WP_063148219.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 104360 105313 . - . ID=gene-VMS06_RS18795;Name=VMS06_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18795 NZ_JAVXZI010000018.1 Protein Homology CDS 104360 105313 . - 0 ID=cds-WP_046621788.1;Parent=gene-VMS06_RS18795;Dbxref=GenBank:WP_046621788.1;Name=WP_046621788.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693960.1;locus_tag=VMS06_RS18795;product=polysaccharide deacetylase family protein;protein_id=WP_046621788.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 105464 106534 . + . ID=gene-VMS06_RS18800;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=VMS06_RS18800 NZ_JAVXZI010000018.1 Protein Homology CDS 105464 106534 . + 0 ID=cds-WP_074134778.1;Parent=gene-VMS06_RS18800;Dbxref=GenBank:WP_074134778.1;Name=WP_074134778.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383615.1;locus_tag=VMS06_RS18800;product=putative lipopolysaccharide heptosyltransferase III;protein_id=WP_074134778.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 106531 107658 . + . ID=gene-VMS06_RS18805;Name=VMS06_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18805 NZ_JAVXZI010000018.1 Protein Homology CDS 106531 107658 . + 0 ID=cds-WP_063148218.1;Parent=gene-VMS06_RS18805;Dbxref=GenBank:WP_063148218.1;Name=WP_063148218.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882684.1;locus_tag=VMS06_RS18805;product=glycosyltransferase family 4 protein;protein_id=WP_063148218.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 107661 108761 . + . ID=gene-VMS06_RS18810;Name=VMS06_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18810 NZ_JAVXZI010000018.1 Protein Homology CDS 107661 108761 . + 0 ID=cds-WP_046621790.1;Parent=gene-VMS06_RS18810;Dbxref=GenBank:WP_046621790.1;Name=WP_046621790.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693963.1;locus_tag=VMS06_RS18810;product=glycosyltransferase;protein_id=WP_046621790.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 108773 109762 . + . ID=gene-VMS06_RS18815;Name=VMS06_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18815 NZ_JAVXZI010000018.1 Protein Homology CDS 108773 109762 . + 0 ID=cds-WP_045621031.1;Parent=gene-VMS06_RS18815;Dbxref=GenBank:WP_045621031.1;Name=WP_045621031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882686.1;locus_tag=VMS06_RS18815;product=glycosyltransferase;protein_id=WP_045621031.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 109829 111103 . + . ID=gene-VMS06_RS18820;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=VMS06_RS18820 NZ_JAVXZI010000018.1 Protein Homology CDS 109829 111103 . + 0 ID=cds-WP_063148216.1;Parent=gene-VMS06_RS18820;Dbxref=GenBank:WP_063148216.1;Name=WP_063148216.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229435.1;locus_tag=VMS06_RS18820;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_063148216.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 111103 111873 . + . ID=gene-VMS06_RS18825;Name=VMS06_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18825 NZ_JAVXZI010000018.1 Protein Homology CDS 111103 111873 . + 0 ID=cds-WP_003860875.1;Parent=gene-VMS06_RS18825;Dbxref=GenBank:WP_003860875.1;Name=WP_003860875.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502696.1;locus_tag=VMS06_RS18825;product=glycosyltransferase family 2 protein;protein_id=WP_003860875.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 111877 112356 . + . ID=gene-VMS06_RS18830;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=VMS06_RS18830 NZ_JAVXZI010000018.1 Protein Homology CDS 111877 112356 . + 0 ID=cds-WP_022646622.1;Parent=gene-VMS06_RS18830;Dbxref=GenBank:WP_022646622.1;Name=WP_022646622.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229437.1;locus_tag=VMS06_RS18830;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_022646622.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 112359 113168 . - . ID=gene-VMS06_RS18835;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=VMS06_RS18835 NZ_JAVXZI010000018.1 Protein Homology CDS 112359 113168 . - 0 ID=cds-WP_003860879.1;Parent=gene-VMS06_RS18835;Dbxref=GenBank:WP_003860879.1;Name=WP_003860879.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312537.1;locus_tag=VMS06_RS18835;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_003860879.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 113241 113408 . - . ID=gene-VMS06_RS18840;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=VMS06_RS18840 NZ_JAVXZI010000018.1 Protein Homology CDS 113241 113408 . - 0 ID=cds-WP_003024094.1;Parent=gene-VMS06_RS18840;Dbxref=GenBank:WP_003024094.1;Name=WP_003024094.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=VMS06_RS18840;product=50S ribosomal protein L33;protein_id=WP_003024094.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 113431 113667 . - . ID=gene-VMS06_RS18845;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=VMS06_RS18845 NZ_JAVXZI010000018.1 Protein Homology CDS 113431 113667 . - 0 ID=cds-WP_002436699.1;Parent=gene-VMS06_RS18845;Dbxref=GenBank:WP_002436699.1;Name=WP_002436699.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=VMS06_RS18845;product=50S ribosomal protein L28;protein_id=WP_002436699.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 113885 114550 . - . ID=gene-VMS06_RS18850;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=VMS06_RS18850 NZ_JAVXZI010000018.1 Protein Homology CDS 113885 114550 . - 0 ID=cds-WP_022646621.1;Parent=gene-VMS06_RS18850;Dbxref=GenBank:WP_022646621.1;Name=WP_022646621.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426422.1;locus_tag=VMS06_RS18850;product=RadC family protein;protein_id=WP_022646621.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 114724 115935 . + . ID=gene-VMS06_RS18855;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=VMS06_RS18855 NZ_JAVXZI010000018.1 Protein Homology CDS 114724 115935 . + 0 ID=cds-WP_087878399.1;Parent=gene-VMS06_RS18855;Dbxref=GenBank:WP_087878399.1;Name=WP_087878399.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=VMS06_RS18855;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_087878399.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 115913 116371 . + . ID=gene-VMS06_RS18860;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=VMS06_RS18860 NZ_JAVXZI010000018.1 Protein Homology CDS 115913 116371 . + 0 ID=cds-WP_015570042.1;Parent=gene-VMS06_RS18860;Dbxref=GenBank:WP_015570042.1;Name=WP_015570042.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=VMS06_RS18860;product=dUTP diphosphatase;protein_id=WP_015570042.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 116493 117089 . + . ID=gene-VMS06_RS18865;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=VMS06_RS18865 NZ_JAVXZI010000018.1 Protein Homology CDS 116493 117089 . + 0 ID=cds-WP_003860901.1;Parent=gene-VMS06_RS18865;Dbxref=GenBank:WP_003860901.1;Name=WP_003860901.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=VMS06_RS18865;product=nucleoid occlusion factor SlmA;protein_id=WP_003860901.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 117172 117813 . - . ID=gene-VMS06_RS18870;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=VMS06_RS18870 NZ_JAVXZI010000018.1 Protein Homology CDS 117172 117813 . - 0 ID=cds-WP_023305206.1;Parent=gene-VMS06_RS18870;Dbxref=GenBank:WP_023305206.1;Name=WP_023305206.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709421.2;locus_tag=VMS06_RS18870;product=orotate phosphoribosyltransferase;protein_id=WP_023305206.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 117880 118596 . - . ID=gene-VMS06_RS18875;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=VMS06_RS18875 NZ_JAVXZI010000018.1 Protein Homology CDS 117880 118596 . - 0 ID=cds-WP_048966550.1;Parent=gene-VMS06_RS18875;Dbxref=GenBank:WP_048966550.1;Name=WP_048966550.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=VMS06_RS18875;product=ribonuclease PH;protein_id=WP_048966550.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 118722 119585 . + . ID=gene-VMS06_RS18880;Name=VMS06_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18880 NZ_JAVXZI010000018.1 Protein Homology CDS 118722 119585 . + 0 ID=cds-WP_003860907.1;Parent=gene-VMS06_RS18880;Dbxref=GenBank:WP_003860907.1;Name=WP_003860907.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=VMS06_RS18880;product=YicC/YloC family endoribonuclease;protein_id=WP_003860907.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 119791 120408 . + . ID=gene-VMS06_RS18885;Name=VMS06_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18885 NZ_JAVXZI010000018.1 Protein Homology CDS 119791 120408 . + 0 ID=cds-WP_023299016.1;Parent=gene-VMS06_RS18885;Dbxref=GenBank:WP_023299016.1;Name=WP_023299016.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229460.1;locus_tag=VMS06_RS18885;product=trimeric intracellular cation channel family protein;protein_id=WP_023299016.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 120411 122081 . - . ID=gene-VMS06_RS18890;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=VMS06_RS18890 NZ_JAVXZI010000018.1 Protein Homology CDS 120411 122081 . - 0 ID=cds-WP_063148215.1;Parent=gene-VMS06_RS18890;Dbxref=GenBank:WP_063148215.1;Name=WP_063148215.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426437.1;locus_tag=VMS06_RS18890;product=NAD-dependent DNA ligase LigB;protein_id=WP_063148215.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 122333 122956 . + . ID=gene-VMS06_RS18895;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=VMS06_RS18895 NZ_JAVXZI010000018.1 Protein Homology CDS 122333 122956 . + 0 ID=cds-WP_006177710.1;Parent=gene-VMS06_RS18895;Dbxref=GenBank:WP_006177710.1;Name=WP_006177710.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=VMS06_RS18895;product=guanylate kinase;protein_id=WP_006177710.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 123011 123286 . + . ID=gene-VMS06_RS18900;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=VMS06_RS18900 NZ_JAVXZI010000018.1 Protein Homology CDS 123011 123286 . + 0 ID=cds-WP_000135058.1;Parent=gene-VMS06_RS18900;Dbxref=GenBank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=VMS06_RS18900;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 123306 125420 . + . ID=gene-VMS06_RS18905;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=VMS06_RS18905 NZ_JAVXZI010000018.1 Protein Homology CDS 123306 125420 . + 0 ID=cds-WP_022646616.1;Parent=gene-VMS06_RS18905;Dbxref=GenBank:WP_022646616.1;Name=WP_022646616.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229464.1;locus_tag=VMS06_RS18905;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_022646616.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 125425 126114 . + . ID=gene-VMS06_RS18910;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=VMS06_RS18910 NZ_JAVXZI010000018.1 Protein Homology CDS 125425 126114 . + 0 ID=cds-WP_032622047.1;Parent=gene-VMS06_RS18910;Dbxref=GenBank:WP_032622047.1;Name=WP_032622047.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418108.1;locus_tag=VMS06_RS18910;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_032622047.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 126118 128199 . + . ID=gene-VMS06_RS18915;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=VMS06_RS18915 NZ_JAVXZI010000018.1 Protein Homology CDS 126118 128199 . + 0 ID=cds-WP_023299014.1;Parent=gene-VMS06_RS18915;Dbxref=GenBank:WP_023299014.1;Name=WP_023299014.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462644.1;locus_tag=VMS06_RS18915;product=ATP-dependent DNA helicase RecG;protein_id=WP_023299014.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 128203 129405 . - . ID=gene-VMS06_RS18920;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=VMS06_RS18920 NZ_JAVXZI010000018.1 Protein Homology CDS 128203 129405 . - 0 ID=cds-WP_006812438.1;Parent=gene-VMS06_RS18920;Dbxref=GenBank:WP_006812438.1;Name=WP_006812438.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860924.1;locus_tag=VMS06_RS18920;product=sodium/glutamate symporter;protein_id=WP_006812438.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 129631 131022 . + . ID=gene-VMS06_RS18925;Name=xanP;gbkey=Gene;gene=xanP;gene_biotype=protein_coding;locus_tag=VMS06_RS18925 NZ_JAVXZI010000018.1 Protein Homology CDS 129631 131022 . + 0 ID=cds-WP_032626600.1;Parent=gene-VMS06_RS18925;Dbxref=GenBank:WP_032626600.1;Name=WP_032626600.1;gbkey=CDS;gene=xanP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855527.1;locus_tag=VMS06_RS18925;product=xanthine/proton symporter XanP;protein_id=WP_032626600.1;transl_table=11 NZ_JAVXZI010000018.1 RefSeq gene 131141 132835 . + . ID=gene-VMS06_RS18930;Name=VMS06_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18930 NZ_JAVXZI010000018.1 Protein Homology CDS 131141 132835 . + 0 ID=cds-WP_063148213.1;Parent=gene-VMS06_RS18930;Dbxref=GenBank:WP_063148213.1;Name=WP_063148213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812440.1;locus_tag=VMS06_RS18930;product=AsmA family protein;protein_id=WP_063148213.1;transl_table=11 ##sequence-region NZ_JAVXZI010000019.1 1 132483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000019.1 RefSeq region 1 132483 . + . ID=NZ_JAVXZI010000019.1:1..132483;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000019.1 RefSeq gene 1 105 . + . ID=gene-VMS06_RS18935;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VMS06_RS18935;partial=true;start_range=.,1 NZ_JAVXZI010000019.1 cmsearch rRNA 1 105 . + . ID=rna-VMS06_RS18935;Parent=gene-VMS06_RS18935;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS18935;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000019.1 cmsearch exon 1 105 . + . ID=exon-VMS06_RS18935-1;Parent=rna-VMS06_RS18935;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS18935;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000019.1 RefSeq gene 161 237 . + . ID=gene-VMS06_RS18940;Name=VMS06_RS18940;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS18940 NZ_JAVXZI010000019.1 tRNAscan-SE tRNA 161 237 . + . ID=rna-VMS06_RS18940;Parent=gene-VMS06_RS18940;anticodon=(pos:195..197);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18940;product=tRNA-Asp NZ_JAVXZI010000019.1 tRNAscan-SE exon 161 237 . + . ID=exon-VMS06_RS18940-1;Parent=rna-VMS06_RS18940;anticodon=(pos:195..197);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18940;product=tRNA-Asp NZ_JAVXZI010000019.1 RefSeq gene 398 1201 . + . ID=gene-VMS06_RS18945;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=VMS06_RS18945 NZ_JAVXZI010000019.1 Protein Homology CDS 398 1201 . + 0 ID=cds-WP_048966286.1;Parent=gene-VMS06_RS18945;Dbxref=GenBank:WP_048966286.1;Name=WP_048966286.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459253.1;locus_tag=VMS06_RS18945;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_048966286.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 1232 2137 . - . ID=gene-VMS06_RS18950;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=VMS06_RS18950 NZ_JAVXZI010000019.1 Protein Homology CDS 1232 2137 . - 0 ID=cds-WP_323630700.1;Parent=gene-VMS06_RS18950;Dbxref=GenBank:WP_323630700.1;Name=WP_323630700.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863251.1;locus_tag=VMS06_RS18950;product=DNA-binding transcriptional regulator YafC;protein_id=WP_323630700.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 2242 3417 . + . ID=gene-VMS06_RS18955;Name=VMS06_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18955 NZ_JAVXZI010000019.1 Protein Homology CDS 2242 3417 . + 0 ID=cds-WP_063148303.1;Parent=gene-VMS06_RS18955;Dbxref=GenBank:WP_063148303.1;Name=WP_063148303.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003830796.1;locus_tag=VMS06_RS18955;product=MFS transporter;protein_id=WP_063148303.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 3555 4355 . + . ID=gene-VMS06_RS18960;Name=VMS06_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18960 NZ_JAVXZI010000019.1 Protein Homology CDS 3555 4355 . + 0 ID=cds-WP_032621812.1;Parent=gene-VMS06_RS18960;Dbxref=GenBank:WP_032621812.1;Name=WP_032621812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414745.1;locus_tag=VMS06_RS18960;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_032621812.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 4433 5206 . + . ID=gene-VMS06_RS18965;Name=VMS06_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18965 NZ_JAVXZI010000019.1 Protein Homology CDS 4433 5206 . + 0 ID=cds-WP_022647127.1;Parent=gene-VMS06_RS18965;Dbxref=GenBank:WP_022647127.1;Name=WP_022647127.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571390.1;locus_tag=VMS06_RS18965;product=class I SAM-dependent methyltransferase;protein_id=WP_022647127.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 5259 6623 . - . ID=gene-VMS06_RS18970;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=VMS06_RS18970 NZ_JAVXZI010000019.1 Protein Homology CDS 5259 6623 . - 0 ID=cds-WP_022647128.1;Parent=gene-VMS06_RS18970;Dbxref=GenBank:WP_022647128.1;Name=WP_022647128.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=VMS06_RS18970;product=murein transglycosylase D;protein_id=WP_022647128.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 6692 7450 . - . ID=gene-VMS06_RS18975;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=VMS06_RS18975 NZ_JAVXZI010000019.1 Protein Homology CDS 6692 7450 . - 0 ID=cds-WP_022647129.1;Parent=gene-VMS06_RS18975;Dbxref=GenBank:WP_022647129.1;Name=WP_022647129.1;Ontology_term=GO:0051596,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069001.1;locus_tag=VMS06_RS18975;product=hydroxyacylglutathione hydrolase;protein_id=WP_022647129.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 7483 8199 . + . ID=gene-VMS06_RS18980;Name=VMS06_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS18980 NZ_JAVXZI010000019.1 Protein Homology CDS 7483 8199 . + 0 ID=cds-WP_023299381.1;Parent=gene-VMS06_RS18980;Dbxref=GenBank:WP_023299381.1;Name=WP_023299381.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069002.1;locus_tag=VMS06_RS18980;product=class I SAM-dependent methyltransferase;protein_id=WP_023299381.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 8200 8778 . - . ID=gene-VMS06_RS18985;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=VMS06_RS18985 NZ_JAVXZI010000019.1 Protein Homology CDS 8200 8778 . - 0 ID=cds-WP_162269389.1;Parent=gene-VMS06_RS18985;Dbxref=GenBank:WP_162269389.1;Name=WP_162269389.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191888.1;locus_tag=VMS06_RS18985;product=ribonuclease HI;protein_id=WP_162269389.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 8732 9463 . + . ID=gene-VMS06_RS18990;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=VMS06_RS18990 NZ_JAVXZI010000019.1 Protein Homology CDS 8732 9463 . + 0 ID=cds-WP_072201000.1;Parent=gene-VMS06_RS18990;Dbxref=GenBank:WP_072201000.1;Name=WP_072201000.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456642.1;locus_tag=VMS06_RS18990;product=DNA polymerase III subunit epsilon;protein_id=WP_072201000.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 9596 9672 . + . ID=gene-VMS06_RS18995;Name=VMS06_RS18995;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS18995 NZ_JAVXZI010000019.1 tRNAscan-SE tRNA 9596 9672 . + . ID=rna-VMS06_RS18995;Parent=gene-VMS06_RS18995;anticodon=(pos:9630..9632);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18995;product=tRNA-Asp NZ_JAVXZI010000019.1 tRNAscan-SE exon 9596 9672 . + . ID=exon-VMS06_RS18995-1;Parent=rna-VMS06_RS18995;anticodon=(pos:9630..9632);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS18995;product=tRNA-Asp NZ_JAVXZI010000019.1 RefSeq gene 10059 10778 . + . ID=gene-VMS06_RS19000;Name=VMS06_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19000 NZ_JAVXZI010000019.1 Protein Homology CDS 10059 10778 . + 0 ID=cds-WP_022647132.1;Parent=gene-VMS06_RS19000;Dbxref=GenBank:WP_022647132.1;Name=WP_022647132.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427872.1;locus_tag=VMS06_RS19000;product=FadR/GntR family transcriptional regulator;protein_id=WP_022647132.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 10775 11788 . + . ID=gene-VMS06_RS19005;Name=VMS06_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19005 NZ_JAVXZI010000019.1 Protein Homology CDS 10775 11788 . + 0 ID=cds-WP_063148305.1;Parent=gene-VMS06_RS19005;Dbxref=GenBank:WP_063148305.1;Name=WP_063148305.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571385.1;locus_tag=VMS06_RS19005;product=ABC transporter ATP-binding protein;protein_id=WP_063148305.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 11785 12867 . + . ID=gene-VMS06_RS19010;Name=VMS06_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19010 NZ_JAVXZI010000019.1 Protein Homology CDS 11785 12867 . + 0 ID=cds-WP_048966292.1;Parent=gene-VMS06_RS19010;Dbxref=GenBank:WP_048966292.1;Name=WP_048966292.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882797.1;locus_tag=VMS06_RS19010;product=ABC transporter ATP-binding protein;protein_id=WP_048966292.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 12870 14384 . + . ID=gene-VMS06_RS19015;Name=VMS06_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19015 NZ_JAVXZI010000019.1 Protein Homology CDS 12870 14384 . + 0 ID=cds-WP_074136392.1;Parent=gene-VMS06_RS19015;Dbxref=GenBank:WP_074136392.1;Name=WP_074136392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830773.1;locus_tag=VMS06_RS19015;product=ABC transporter substrate-binding protein;protein_id=WP_074136392.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 14403 15344 . + . ID=gene-VMS06_RS19020;Name=VMS06_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19020 NZ_JAVXZI010000019.1 Protein Homology CDS 14403 15344 . + 0 ID=cds-WP_022647136.1;Parent=gene-VMS06_RS19020;Dbxref=GenBank:WP_022647136.1;Name=WP_022647136.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571382.1;locus_tag=VMS06_RS19020;product=ABC transporter permease;protein_id=WP_022647136.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 15347 16222 . + . ID=gene-VMS06_RS19025;Name=VMS06_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19025 NZ_JAVXZI010000019.1 Protein Homology CDS 15347 16222 . + 0 ID=cds-WP_048965741.1;Parent=gene-VMS06_RS19025;Dbxref=GenBank:WP_048965741.1;Name=WP_048965741.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427880.1;locus_tag=VMS06_RS19025;product=ABC transporter permease;protein_id=WP_048965741.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 16232 17833 . + . ID=gene-VMS06_RS19030;Name=VMS06_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19030 NZ_JAVXZI010000019.1 Protein Homology CDS 16232 17833 . + 0 ID=cds-WP_063148306.1;Parent=gene-VMS06_RS19030;Dbxref=GenBank:WP_063148306.1;Name=WP_063148306.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882793.1;locus_tag=VMS06_RS19030;product=gamma-glutamyltransferase family protein;protein_id=WP_063148306.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 17875 18645 . - . ID=gene-VMS06_RS19035;Name=VMS06_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19035 NZ_JAVXZI010000019.1 Protein Homology CDS 17875 18645 . - 0 ID=cds-WP_023305484.1;Parent=gene-VMS06_RS19035;Dbxref=GenBank:WP_023305484.1;Name=WP_023305484.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014069011.1;locus_tag=VMS06_RS19035;product=amidohydrolase;protein_id=WP_023305484.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 18753 21197 . - . ID=gene-VMS06_RS19040;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=VMS06_RS19040 NZ_JAVXZI010000019.1 Protein Homology CDS 18753 21197 . - 0 ID=cds-WP_038415395.1;Parent=gene-VMS06_RS19040;Dbxref=GenBank:WP_038415395.1;Name=WP_038415395.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459307.1;locus_tag=VMS06_RS19040;product=acyl-CoA dehydrogenase FadE;protein_id=WP_038415395.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 21437 22015 . + . ID=gene-VMS06_RS19045;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=VMS06_RS19045 NZ_JAVXZI010000019.1 Protein Homology CDS 21437 22015 . + 0 ID=cds-WP_003863232.1;Parent=gene-VMS06_RS19045;Dbxref=GenBank:WP_003863232.1;Name=WP_003863232.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308276.1;locus_tag=VMS06_RS19045;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_003863232.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 22064 22831 . + . ID=gene-VMS06_RS19050;Name=VMS06_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19050 NZ_JAVXZI010000019.1 Protein Homology CDS 22064 22831 . + 0 ID=cds-WP_017383120.1;Parent=gene-VMS06_RS19050;Dbxref=GenBank:WP_017383120.1;Name=WP_017383120.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414758.1;locus_tag=VMS06_RS19050;product=class II glutamine amidotransferase;protein_id=WP_017383120.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 22802 23542 . - . ID=gene-VMS06_RS19055;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=VMS06_RS19055 NZ_JAVXZI010000019.1 Protein Homology CDS 22802 23542 . - 0 ID=cds-WP_063148307.1;Parent=gene-VMS06_RS19055;Dbxref=GenBank:WP_063148307.1;Name=WP_063148307.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225264.1;locus_tag=VMS06_RS19055;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_063148307.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 23843 25186 . + . ID=gene-VMS06_RS19060;Name=VMS06_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19060 NZ_JAVXZI010000019.1 Protein Homology CDS 23843 25186 . + 0 ID=cds-WP_023295963.1;Parent=gene-VMS06_RS19060;Dbxref=GenBank:WP_023295963.1;Name=WP_023295963.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225265.1;locus_tag=VMS06_RS19060;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_023295963.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 25189 26424 . + . ID=gene-VMS06_RS19065;Name=VMS06_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19065 NZ_JAVXZI010000019.1 Protein Homology CDS 25189 26424 . + 0 ID=cds-WP_023299389.1;Parent=gene-VMS06_RS19065;Dbxref=GenBank:WP_023299389.1;Name=WP_023299389.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225266.1;locus_tag=VMS06_RS19065;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_023299389.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 26417 27211 . + . ID=gene-VMS06_RS19070;Name=VMS06_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19070 NZ_JAVXZI010000019.1 Protein Homology CDS 26417 27211 . + 0 ID=cds-WP_022647144.1;Parent=gene-VMS06_RS19070;Dbxref=GenBank:WP_022647144.1;Name=WP_022647144.1;Ontology_term=GO:0006814,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225267.1;locus_tag=VMS06_RS19070;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_022647144.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 27204 27842 . + . ID=gene-VMS06_RS19075;Name=VMS06_RS19075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19075 NZ_JAVXZI010000019.1 Protein Homology CDS 27204 27842 . + 0 ID=cds-WP_003863219.1;Parent=gene-VMS06_RS19075;Dbxref=GenBank:WP_003863219.1;Name=WP_003863219.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965772.1;locus_tag=VMS06_RS19075;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_003863219.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 27849 28445 . + . ID=gene-VMS06_RS19080;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=VMS06_RS19080 NZ_JAVXZI010000019.1 Protein Homology CDS 27849 28445 . + 0 ID=cds-WP_003863217.1;Parent=gene-VMS06_RS19080;Dbxref=GenBank:WP_003863217.1;Name=WP_003863217.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225269.1;locus_tag=VMS06_RS19080;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_003863217.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 28456 29679 . + . ID=gene-VMS06_RS19085;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=VMS06_RS19085 NZ_JAVXZI010000019.1 Protein Homology CDS 28456 29679 . + 0 ID=cds-WP_015571374.1;Parent=gene-VMS06_RS19085;Dbxref=GenBank:WP_015571374.1;Name=WP_015571374.1;Ontology_term=GO:0006814,GO:0016655,GO:0051537,GO:0016020;gbkey=CDS;gene=nqrF;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225270.1;locus_tag=VMS06_RS19085;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_015571374.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 29682 29882 . + . ID=gene-VMS06_RS19090;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=VMS06_RS19090 NZ_JAVXZI010000019.1 Protein Homology CDS 29682 29882 . + 0 ID=cds-WP_003863212.1;Parent=gene-VMS06_RS19090;Dbxref=GenBank:WP_003863212.1;Name=WP_003863212.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500253.1;locus_tag=VMS06_RS19090;product=(Na+)-NQR maturation NqrM;protein_id=WP_003863212.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 29990 31048 . + . ID=gene-VMS06_RS19095;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=VMS06_RS19095 NZ_JAVXZI010000019.1 Protein Homology CDS 29990 31048 . + 0 ID=cds-WP_063148308.1;Parent=gene-VMS06_RS19095;Dbxref=GenBank:WP_063148308.1;Name=WP_063148308.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414766.1;locus_tag=VMS06_RS19095;product=DNA polymerase IV;protein_id=WP_063148308.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 31104 32561 . - . ID=gene-VMS06_RS19100;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=VMS06_RS19100 NZ_JAVXZI010000019.1 Protein Homology CDS 31104 32561 . - 0 ID=cds-WP_032624795.1;Parent=gene-VMS06_RS19100;Dbxref=GenBank:WP_032624795.1;Name=WP_032624795.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225275.1;locus_tag=VMS06_RS19100;product=cytosol nonspecific dipeptidase;protein_id=WP_032624795.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 32820 33278 . + . ID=gene-VMS06_RS19105;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=VMS06_RS19105 NZ_JAVXZI010000019.1 Protein Homology CDS 32820 33278 . + 0 ID=cds-WP_003863205.1;Parent=gene-VMS06_RS19105;Dbxref=GenBank:WP_003863205.1;Name=WP_003863205.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459314.1;locus_tag=VMS06_RS19105;product=xanthine phosphoribosyltransferase;protein_id=WP_003863205.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 33383 34627 . + . ID=gene-VMS06_RS19110;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=VMS06_RS19110 NZ_JAVXZI010000019.1 Protein Homology CDS 33383 34627 . + 0 ID=cds-WP_023305490.1;Parent=gene-VMS06_RS19110;Dbxref=GenBank:WP_023305490.1;Name=WP_023305490.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459315.1;locus_tag=VMS06_RS19110;product=esterase FrsA;protein_id=WP_023305490.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 34684 35085 . + . ID=gene-VMS06_RS19115;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=VMS06_RS19115 NZ_JAVXZI010000019.1 Protein Homology CDS 34684 35085 . + 0 ID=cds-WP_022647149.1;Parent=gene-VMS06_RS19115;Dbxref=GenBank:WP_022647149.1;Name=WP_022647149.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225278.1;locus_tag=VMS06_RS19115;product=sigma factor-binding protein Crl;protein_id=WP_022647149.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 35217 36269 . - . ID=gene-VMS06_RS19120;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=VMS06_RS19120 NZ_JAVXZI010000019.1 Protein Homology CDS 35217 36269 . - 0 ID=cds-WP_022647150.1;Parent=gene-VMS06_RS19120;Dbxref=GenBank:WP_022647150.1;Name=WP_022647150.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308295.1;locus_tag=VMS06_RS19120;product=phosphoporin PhoE;protein_id=WP_022647150.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 36575 37678 . + . ID=gene-VMS06_RS19125;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=VMS06_RS19125 NZ_JAVXZI010000019.1 Protein Homology CDS 36575 37678 . + 0 ID=cds-WP_015571369.1;Parent=gene-VMS06_RS19125;Dbxref=GenBank:WP_015571369.1;Name=WP_015571369.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308296.1;locus_tag=VMS06_RS19125;product=glutamate 5-kinase;protein_id=WP_015571369.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 37690 38943 . + . ID=gene-VMS06_RS19130;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=VMS06_RS19130 NZ_JAVXZI010000019.1 Protein Homology CDS 37690 38943 . + 0 ID=cds-WP_063148309.1;Parent=gene-VMS06_RS19130;Dbxref=GenBank:WP_063148309.1;Name=WP_063148309.1;Ontology_term=GO:0055129,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225314.1;locus_tag=VMS06_RS19130;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_063148309.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 39055 39130 . + . ID=gene-VMS06_RS19135;Name=VMS06_RS19135;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS19135 NZ_JAVXZI010000019.1 tRNAscan-SE tRNA 39055 39130 . + . ID=rna-VMS06_RS19135;Parent=gene-VMS06_RS19135;anticodon=(pos:39088..39090);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS19135;product=tRNA-Thr NZ_JAVXZI010000019.1 tRNAscan-SE exon 39055 39130 . + . ID=exon-VMS06_RS19135-1;Parent=rna-VMS06_RS19135;anticodon=(pos:39088..39090);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS19135;product=tRNA-Thr NZ_JAVXZI010000019.1 RefSeq gene 39284 40456 . + . ID=gene-VMS06_RS19140;Name=VMS06_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19140 NZ_JAVXZI010000019.1 Protein Homology CDS 39284 40456 . + 0 ID=cds-WP_063843926.1;Parent=gene-VMS06_RS19140;Dbxref=GenBank:WP_063843926.1;Name=WP_063843926.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772661.1;locus_tag=VMS06_RS19140;product=tyrosine-type recombinase/integrase;protein_id=WP_063843926.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 40453 40641 . - . ID=gene-VMS06_RS19145;Name=VMS06_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19145 NZ_JAVXZI010000019.1 Protein Homology CDS 40453 40641 . - 0 ID=cds-WP_000189281.1;Parent=gene-VMS06_RS19145;Dbxref=GenBank:WP_000189281.1;Name=WP_000189281.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000189281.1;locus_tag=VMS06_RS19145;product=helix-turn-helix transcriptional regulator;protein_id=WP_000189281.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 40638 42047 . - . ID=gene-VMS06_RS19150;Name=VMS06_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19150 NZ_JAVXZI010000019.1 Protein Homology CDS 40638 42047 . - 0 ID=cds-WP_063843925.1;Parent=gene-VMS06_RS19150;Dbxref=GenBank:WP_063843925.1;Name=WP_063843925.1;Ontology_term=GO:0005524,GO:0140658;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192966.1;locus_tag=VMS06_RS19150;product=SNF2-related protein;protein_id=WP_063843925.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 42174 42476 . - . ID=gene-VMS06_RS19155;Name=VMS06_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19155 NZ_JAVXZI010000019.1 Protein Homology CDS 42174 42476 . - 0 ID=cds-WP_063843924.1;Parent=gene-VMS06_RS19155;Dbxref=GenBank:WP_063843924.1;Name=WP_063843924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192967.1;locus_tag=VMS06_RS19155;product=PDDEXK family nuclease;protein_id=WP_063843924.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 42466 42687 . - . ID=gene-VMS06_RS19160;Name=VMS06_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19160 NZ_JAVXZI010000019.1 Protein Homology CDS 42466 42687 . - 0 ID=cds-WP_022647157.1;Parent=gene-VMS06_RS19160;Dbxref=GenBank:WP_022647157.1;Name=WP_022647157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000008824.1;locus_tag=VMS06_RS19160;product=ANR family transcriptional regulator;protein_id=WP_022647157.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 42753 43514 . - . ID=gene-VMS06_RS19165;Name=VMS06_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19165 NZ_JAVXZI010000019.1 Protein Homology CDS 42753 43514 . - 0 ID=cds-WP_022647158.1;Parent=gene-VMS06_RS19165;Dbxref=GenBank:WP_022647158.1;Name=WP_022647158.1;Ontology_term=GO:0050135;gbkey=CDS;go_function=NADP+ nucleosidase activity|0050135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001157067.1;locus_tag=VMS06_RS19165;product=TIR domain-containing protein;protein_id=WP_022647158.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 43568 45631 . - . ID=gene-VMS06_RS19170;Name=VMS06_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19170 NZ_JAVXZI010000019.1 Protein Homology CDS 43568 45631 . - 0 ID=cds-WP_063843923.1;Parent=gene-VMS06_RS19170;Dbxref=GenBank:WP_063843923.1;Name=WP_063843923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000065468.1;locus_tag=VMS06_RS19170;product=bifunctional 3'-5' exonuclease/DNA polymerase family protein;protein_id=WP_063843923.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 45654 46184 . + . ID=gene-VMS06_RS19175;Name=VMS06_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19175 NZ_JAVXZI010000019.1 GeneMarkS-2+ CDS 45654 46184 . + 0 ID=cds-WP_063843922.1;Parent=gene-VMS06_RS19175;Dbxref=GenBank:WP_063843922.1;Name=WP_063843922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS19175;product=hypothetical protein;protein_id=WP_063843922.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 46236 46784 . - . ID=gene-VMS06_RS19180;Name=VMS06_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19180 NZ_JAVXZI010000019.1 Protein Homology CDS 46236 46784 . - 0 ID=cds-WP_063843921.1;Parent=gene-VMS06_RS19180;Dbxref=GenBank:WP_063843921.1;Name=WP_063843921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000769009.1;locus_tag=VMS06_RS19180;product=DUF2815 family protein;protein_id=WP_063843921.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 46799 48103 . - . ID=gene-VMS06_RS19185;Name=VMS06_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19185 NZ_JAVXZI010000019.1 Protein Homology CDS 46799 48103 . - 0 ID=cds-WP_063843920.1;Parent=gene-VMS06_RS19185;Dbxref=GenBank:WP_063843920.1;Name=WP_063843920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001386185.1;locus_tag=VMS06_RS19185;product=DUF2800 domain-containing protein;protein_id=WP_063843920.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 48106 49026 . - . ID=gene-VMS06_RS19190;Name=VMS06_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19190 NZ_JAVXZI010000019.1 Protein Homology CDS 48106 49026 . - 0 ID=cds-WP_063843919.1;Parent=gene-VMS06_RS19190;Dbxref=GenBank:WP_063843919.1;Name=WP_063843919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051352.1;locus_tag=VMS06_RS19190;product=hypothetical protein;protein_id=WP_063843919.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 49623 50246 . - . ID=gene-VMS06_RS19195;Name=VMS06_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19195 NZ_JAVXZI010000019.1 Protein Homology CDS 49623 50246 . - 0 ID=cds-WP_063843918.1;Parent=gene-VMS06_RS19195;Dbxref=GenBank:WP_063843918.1;Name=WP_063843918.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000049986.1;locus_tag=VMS06_RS19195;product=LexA family protein;protein_id=WP_063843918.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 50367 50579 . + . ID=gene-VMS06_RS19200;Name=VMS06_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19200 NZ_JAVXZI010000019.1 Protein Homology CDS 50367 50579 . + 0 ID=cds-WP_015571354.1;Parent=gene-VMS06_RS19200;Dbxref=GenBank:WP_015571354.1;Name=WP_015571354.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619025.1;locus_tag=VMS06_RS19200;product=helix-turn-helix domain-containing protein;protein_id=WP_015571354.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 50583 52751 . + . ID=gene-VMS06_RS19205;Name=VMS06_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19205 NZ_JAVXZI010000019.1 Protein Homology CDS 50583 52751 . + 0 ID=cds-WP_323630702.1;Parent=gene-VMS06_RS19205;Dbxref=GenBank:WP_323630702.1;Name=WP_323630702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649534.1;locus_tag=VMS06_RS19205;product=VapE domain-containing protein;protein_id=WP_323630702.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 53060 53335 . + . ID=gene-VMS06_RS19210;Name=VMS06_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19210 NZ_JAVXZI010000019.1 Protein Homology CDS 53060 53335 . + 0 ID=cds-WP_032629981.1;Parent=gene-VMS06_RS19210;Dbxref=GenBank:WP_032629981.1;Name=WP_032629981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571352.1;locus_tag=VMS06_RS19210;product=hypothetical protein;protein_id=WP_032629981.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 53613 54050 . + . ID=gene-VMS06_RS19215;Name=VMS06_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19215 NZ_JAVXZI010000019.1 Protein Homology CDS 53613 54050 . + 0 ID=cds-WP_063843916.1;Parent=gene-VMS06_RS19215;Dbxref=GenBank:WP_063843916.1;Name=WP_063843916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619028.1;locus_tag=VMS06_RS19215;product=hypothetical protein;protein_id=WP_063843916.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 54063 54293 . + . ID=gene-VMS06_RS19220;Name=VMS06_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19220 NZ_JAVXZI010000019.1 Protein Homology CDS 54063 54293 . + 0 ID=cds-WP_015571350.1;Parent=gene-VMS06_RS19220;Dbxref=GenBank:WP_015571350.1;Name=WP_015571350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619029.1;locus_tag=VMS06_RS19220;product=hypothetical protein;protein_id=WP_015571350.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 54297 55922 . + . ID=gene-VMS06_RS19225;Name=VMS06_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19225 NZ_JAVXZI010000019.1 Protein Homology CDS 54297 55922 . + 0 ID=cds-WP_063843915.1;Parent=gene-VMS06_RS19225;Dbxref=GenBank:WP_063843915.1;Name=WP_063843915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384456.1;locus_tag=VMS06_RS19225;product=portal protein;protein_id=WP_063843915.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 55919 56152 . + . ID=gene-VMS06_RS19230;Name=VMS06_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19230 NZ_JAVXZI010000019.1 Protein Homology CDS 55919 56152 . + 0 ID=cds-WP_001619031.1;Parent=gene-VMS06_RS19230;Dbxref=GenBank:WP_001619031.1;Name=WP_001619031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384455.1;locus_tag=VMS06_RS19230;product=Bbp19 family protein;protein_id=WP_001619031.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 56139 56975 . + . ID=gene-VMS06_RS19235;Name=VMS06_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19235 NZ_JAVXZI010000019.1 Protein Homology CDS 56139 56975 . + 0 ID=cds-WP_063843914.1;Parent=gene-VMS06_RS19235;Dbxref=GenBank:WP_063843914.1;Name=WP_063843914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384454.1;locus_tag=VMS06_RS19235;product=hypothetical protein;protein_id=WP_063843914.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 57194 58105 . + . ID=gene-VMS06_RS19240;Name=VMS06_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19240 NZ_JAVXZI010000019.1 Protein Homology CDS 57194 58105 . + 0 ID=cds-WP_063843913.1;Parent=gene-VMS06_RS19240;Dbxref=GenBank:WP_063843913.1;Name=WP_063843913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456276.1;locus_tag=VMS06_RS19240;product=phage capsid protein;protein_id=WP_063843913.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 58163 58726 . + . ID=gene-VMS06_RS19245;Name=VMS06_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19245 NZ_JAVXZI010000019.1 Protein Homology CDS 58163 58726 . + 0 ID=cds-WP_050870258.1;Parent=gene-VMS06_RS19245;Dbxref=GenBank:WP_050870258.1;Name=WP_050870258.1;Ontology_term=GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365940.1;locus_tag=VMS06_RS19245;product=phage connector family protein;protein_id=WP_050870258.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 58728 60716 . + . ID=gene-VMS06_RS19250;Name=VMS06_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19250 NZ_JAVXZI010000019.1 Protein Homology CDS 58728 60716 . + 0 ID=cds-WP_063843912.1;Parent=gene-VMS06_RS19250;Dbxref=GenBank:WP_063843912.1;Name=WP_063843912.1;Ontology_term=GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456274.1;locus_tag=VMS06_RS19250;product=phage tail protein;protein_id=WP_063843912.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 60718 61167 . + . ID=gene-VMS06_RS19255;Name=VMS06_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19255 NZ_JAVXZI010000019.1 Protein Homology CDS 60718 61167 . + 0 ID=cds-WP_063843911.1;Parent=gene-VMS06_RS19255;Dbxref=GenBank:WP_063843911.1;Name=WP_063843911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571344.1;locus_tag=VMS06_RS19255;product=GNAT family N-acetyltransferase;protein_id=WP_063843911.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 61170 61637 . + . ID=gene-VMS06_RS19260;Name=VMS06_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19260 NZ_JAVXZI010000019.1 Protein Homology CDS 61170 61637 . + 0 ID=cds-WP_063843910.1;Parent=gene-VMS06_RS19260;Dbxref=GenBank:WP_063843910.1;Name=WP_063843910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571343.1;locus_tag=VMS06_RS19260;product=hypothetical protein;protein_id=WP_063843910.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 61640 64348 . + . ID=gene-VMS06_RS19265;Name=VMS06_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19265 NZ_JAVXZI010000019.1 Protein Homology CDS 61640 64348 . + 0 ID=cds-WP_063843909.1;Parent=gene-VMS06_RS19265;Dbxref=GenBank:WP_063843909.1;Name=WP_063843909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619038.1;locus_tag=VMS06_RS19265;product=lytic transglycosylase domain-containing protein;protein_id=WP_063843909.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq pseudogene 64348 67238 . + . ID=gene-VMS06_RS19270;Name=VMS06_RS19270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS19270;pseudo=true NZ_JAVXZI010000019.1 Protein Homology CDS 64348 67238 . + 0 ID=cds-VMS06_RS19270;Parent=gene-VMS06_RS19270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019456270.1;locus_tag=VMS06_RS19270;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 67303 67644 . + . ID=gene-VMS06_RS19275;Name=VMS06_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19275 NZ_JAVXZI010000019.1 Protein Homology CDS 67303 67644 . + 0 ID=cds-WP_063843907.1;Parent=gene-VMS06_RS19275;Dbxref=GenBank:WP_063843907.1;Name=WP_063843907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619040.1;locus_tag=VMS06_RS19275;product=hypothetical protein;protein_id=WP_063843907.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 67641 69251 . + . ID=gene-VMS06_RS19280;Name=terL;gbkey=Gene;gene=terL;gene_biotype=protein_coding;locus_tag=VMS06_RS19280 NZ_JAVXZI010000019.1 Protein Homology CDS 67641 69251 . + 0 ID=cds-WP_063843906.1;Parent=gene-VMS06_RS19280;Dbxref=GenBank:WP_063843906.1;Name=WP_063843906.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;gene=terL;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141027.1;locus_tag=VMS06_RS19280;product=phage terminase large subunit;protein_id=WP_063843906.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 69272 71545 . + . ID=gene-VMS06_RS19285;Name=VMS06_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19285 NZ_JAVXZI010000019.1 Protein Homology CDS 69272 71545 . + 0 ID=cds-WP_323630703.1;Parent=gene-VMS06_RS19285;Dbxref=GenBank:WP_323630703.1;Name=WP_323630703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365949.1;locus_tag=VMS06_RS19285;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_323630703.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 71594 73105 . - . ID=gene-VMS06_RS19290;Name=VMS06_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19290 NZ_JAVXZI010000019.1 Protein Homology CDS 71594 73105 . - 0 ID=cds-WP_080472672.1;Parent=gene-VMS06_RS19290;Dbxref=GenBank:WP_080472672.1;Name=WP_080472672.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025622.7;locus_tag=VMS06_RS19290;product=glucosyltransferase domain-containing protein;protein_id=WP_080472672.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 73133 74044 . - . ID=gene-VMS06_RS19295;Name=VMS06_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19295 NZ_JAVXZI010000019.1 Protein Homology CDS 73133 74044 . - 0 ID=cds-WP_063843903.1;Parent=gene-VMS06_RS19295;Dbxref=GenBank:WP_063843903.1;Name=WP_063843903.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706258.1;locus_tag=VMS06_RS19295;product=glycosyltransferase family 2 protein;protein_id=WP_063843903.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 74041 74403 . - . ID=gene-VMS06_RS19300;Name=VMS06_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19300 NZ_JAVXZI010000019.1 Protein Homology CDS 74041 74403 . - 0 ID=cds-WP_063843902.1;Parent=gene-VMS06_RS19300;Dbxref=GenBank:WP_063843902.1;Name=WP_063843902.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012125606.1;locus_tag=VMS06_RS19300;product=GtrA family protein;protein_id=WP_063843902.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 74553 74777 . + . ID=gene-VMS06_RS19305;Name=VMS06_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19305 NZ_JAVXZI010000019.1 Protein Homology CDS 74553 74777 . + 0 ID=cds-WP_038415426.1;Parent=gene-VMS06_RS19305;Dbxref=GenBank:WP_038415426.1;Name=WP_038415426.1;Ontology_term=GO:0140911,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571338.1;locus_tag=VMS06_RS19305;product=class II holin family protein;protein_id=WP_038415426.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 74764 75303 . + . ID=gene-VMS06_RS19310;Name=VMS06_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19310 NZ_JAVXZI010000019.1 Protein Homology CDS 74764 75303 . + 0 ID=cds-WP_063843901.1;Parent=gene-VMS06_RS19310;Dbxref=GenBank:WP_063843901.1;Name=WP_063843901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571337.1;locus_tag=VMS06_RS19310;product=lysozyme;protein_id=WP_063843901.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 75300 75662 . + . ID=gene-VMS06_RS19315;Name=VMS06_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19315 NZ_JAVXZI010000019.1 Protein Homology CDS 75300 75662 . + 0 ID=cds-WP_063843900.1;Parent=gene-VMS06_RS19315;Dbxref=GenBank:WP_063843900.1;Name=WP_063843900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384437.1;locus_tag=VMS06_RS19315;product=hypothetical protein;protein_id=WP_063843900.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 76227 76715 . - . ID=gene-VMS06_RS19320;Name=VMS06_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19320 NZ_JAVXZI010000019.1 GeneMarkS-2+ CDS 76227 76715 . - 0 ID=cds-WP_139154663.1;Parent=gene-VMS06_RS19320;Dbxref=GenBank:WP_139154663.1;Name=WP_139154663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS19320;product=hypothetical protein;protein_id=WP_139154663.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 76708 77565 . - . ID=gene-VMS06_RS19325;Name=VMS06_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19325 NZ_JAVXZI010000019.1 Protein Homology CDS 76708 77565 . - 0 ID=cds-WP_022647175.1;Parent=gene-VMS06_RS19325;Dbxref=GenBank:WP_022647175.1;Name=WP_022647175.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF012698.7;locus_tag=VMS06_RS19325;product=winged helix-turn-helix domain-containing protein;protein_id=WP_022647175.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 77987 78766 . + . ID=gene-VMS06_RS19330;Name=VMS06_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19330 NZ_JAVXZI010000019.1 Protein Homology CDS 77987 78766 . + 0 ID=cds-WP_022647176.1;Parent=gene-VMS06_RS19330;Dbxref=GenBank:WP_022647176.1;Name=WP_022647176.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.7;locus_tag=VMS06_RS19330;product=EAL domain-containing protein;protein_id=WP_022647176.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 78780 79367 . + . ID=gene-VMS06_RS19335;Name=VMS06_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19335 NZ_JAVXZI010000019.1 GeneMarkS-2+ CDS 78780 79367 . + 0 ID=cds-WP_022647177.1;Parent=gene-VMS06_RS19335;Dbxref=GenBank:WP_022647177.1;Name=WP_022647177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS19335;product=hypothetical protein;protein_id=WP_022647177.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 79584 80132 . + . ID=gene-VMS06_RS19340;Name=VMS06_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19340 NZ_JAVXZI010000019.1 Protein Homology CDS 79584 80132 . + 0 ID=cds-WP_022647178.1;Parent=gene-VMS06_RS19340;Dbxref=GenBank:WP_022647178.1;Name=WP_022647178.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043494.1;locus_tag=VMS06_RS19340;product=fimbrial protein;protein_id=WP_022647178.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 80196 80909 . + . ID=gene-VMS06_RS19345;Name=VMS06_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19345 NZ_JAVXZI010000019.1 Protein Homology CDS 80196 80909 . + 0 ID=cds-WP_063148324.1;Parent=gene-VMS06_RS19345;Dbxref=GenBank:WP_063148324.1;Name=WP_063148324.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000495103.1;locus_tag=VMS06_RS19345;product=fimbrial biogenesis chaperone;protein_id=WP_063148324.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 80934 83519 . + . ID=gene-VMS06_RS19350;Name=VMS06_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19350 NZ_JAVXZI010000019.1 Protein Homology CDS 80934 83519 . + 0 ID=cds-WP_022647180.1;Parent=gene-VMS06_RS19350;Dbxref=GenBank:WP_022647180.1;Name=WP_022647180.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000431540.1;locus_tag=VMS06_RS19350;product=fimbria/pilus outer membrane usher protein;protein_id=WP_022647180.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 83555 84640 . + . ID=gene-VMS06_RS19355;Name=VMS06_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19355 NZ_JAVXZI010000019.1 Protein Homology CDS 83555 84640 . + 0 ID=cds-WP_157843486.1;Parent=gene-VMS06_RS19355;Dbxref=GenBank:WP_157843486.1;Name=WP_157843486.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.7;locus_tag=VMS06_RS19355;product=fimbrial protein;protein_id=WP_157843486.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 84690 84893 . + . ID=gene-VMS06_RS19360;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=VMS06_RS19360 NZ_JAVXZI010000019.1 Protein Homology CDS 84690 84893 . + 0 ID=cds-WP_022647182.1;Parent=gene-VMS06_RS19360;Dbxref=GenBank:WP_022647182.1;Name=WP_022647182.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152106.1;locus_tag=VMS06_RS19360;product=hemolysin expression modulator Hha;protein_id=WP_022647182.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 85260 85754 . - . ID=gene-VMS06_RS19365;Name=VMS06_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19365 NZ_JAVXZI010000019.1 Protein Homology CDS 85260 85754 . - 0 ID=cds-WP_022647183.1;Parent=gene-VMS06_RS19365;Dbxref=GenBank:WP_022647183.1;Name=WP_022647183.1;Ontology_term=GO:0016783,GO:0051536;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015741985.1;locus_tag=VMS06_RS19365;product=2-thiouracil desulfurase family protein;protein_id=WP_022647183.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 85924 86670 . - . ID=gene-VMS06_RS19370;Name=VMS06_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19370 NZ_JAVXZI010000019.1 Protein Homology CDS 85924 86670 . - 0 ID=cds-WP_063148325.1;Parent=gene-VMS06_RS19370;Dbxref=GenBank:WP_063148325.1;Name=WP_063148325.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418726.1;locus_tag=VMS06_RS19370;product=SAM-dependent methyltransferase;protein_id=WP_063148325.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 86681 86938 . - . ID=gene-VMS06_RS19375;Name=VMS06_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19375 NZ_JAVXZI010000019.1 Protein Homology CDS 86681 86938 . - 0 ID=cds-WP_048966038.1;Parent=gene-VMS06_RS19375;Dbxref=GenBank:WP_048966038.1;Name=WP_048966038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463360.1;locus_tag=VMS06_RS19375;product=YjhX family toxin;protein_id=WP_048966038.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 87198 89135 . - . ID=gene-VMS06_RS19380;Name=VMS06_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19380 NZ_JAVXZI010000019.1 Protein Homology CDS 87198 89135 . - 0 ID=cds-WP_022647186.1;Parent=gene-VMS06_RS19380;Dbxref=GenBank:WP_022647186.1;Name=WP_022647186.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694447.1;locus_tag=VMS06_RS19380;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_022647186.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 89153 89647 . - . ID=gene-VMS06_RS19385;Name=VMS06_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19385 NZ_JAVXZI010000019.1 Protein Homology CDS 89153 89647 . - 0 ID=cds-WP_022647187.1;Parent=gene-VMS06_RS19385;Dbxref=GenBank:WP_022647187.1;Name=WP_022647187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016150183.1;locus_tag=VMS06_RS19385;product=putative pterin-binding protein;protein_id=WP_022647187.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 89829 90338 . + . ID=gene-VMS06_RS19390;Name=VMS06_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19390 NZ_JAVXZI010000019.1 Protein Homology CDS 89829 90338 . + 0 ID=cds-WP_063148326.1;Parent=gene-VMS06_RS19390;Dbxref=GenBank:WP_063148326.1;Name=WP_063148326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095766.1;locus_tag=VMS06_RS19390;product=hypothetical protein;protein_id=WP_063148326.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 90361 92145 . - . ID=gene-VMS06_RS19395;Name=VMS06_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19395 NZ_JAVXZI010000019.1 Protein Homology CDS 90361 92145 . - 0 ID=cds-WP_048966040.1;Parent=gene-VMS06_RS19395;Dbxref=GenBank:WP_048966040.1;Name=WP_048966040.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001217015.1;locus_tag=VMS06_RS19395;product=diguanylate cyclase;protein_id=WP_048966040.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 92260 93369 . - . ID=gene-VMS06_RS19400;Name=VMS06_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19400 NZ_JAVXZI010000019.1 Protein Homology CDS 92260 93369 . - 0 ID=cds-WP_022647190.1;Parent=gene-VMS06_RS19400;Dbxref=GenBank:WP_022647190.1;Name=WP_022647190.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176809.1;locus_tag=VMS06_RS19400;product=AI-2E family transporter;protein_id=WP_022647190.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 93528 94928 . + . ID=gene-VMS06_RS19405;Name=mmuP;gbkey=Gene;gene=mmuP;gene_biotype=protein_coding;locus_tag=VMS06_RS19405 NZ_JAVXZI010000019.1 Protein Homology CDS 93528 94928 . + 0 ID=cds-WP_023305550.1;Parent=gene-VMS06_RS19405;Dbxref=GenBank:WP_023305550.1;Name=WP_023305550.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mmuP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414794.4;locus_tag=VMS06_RS19405;product=S-methylmethionine permease;protein_id=WP_023305550.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 94915 95847 . + . ID=gene-VMS06_RS19410;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=VMS06_RS19410 NZ_JAVXZI010000019.1 Protein Homology CDS 94915 95847 . + 0 ID=cds-WP_063148328.1;Parent=gene-VMS06_RS19410;Dbxref=GenBank:WP_063148328.1;Name=WP_063148328.1;Ontology_term=GO:0071265,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225348.1;locus_tag=VMS06_RS19410;product=homocysteine S-methyltransferase;protein_id=WP_063148328.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 96070 97032 . + . ID=gene-VMS06_RS19415;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=VMS06_RS19415 NZ_JAVXZI010000019.1 Protein Homology CDS 96070 97032 . + 0 ID=cds-WP_032624781.1;Parent=gene-VMS06_RS19415;Dbxref=GenBank:WP_032624781.1;Name=WP_032624781.1;Ontology_term=GO:0055085,GO:0015411,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414899.2;locus_tag=VMS06_RS19415;product=taurine ABC transporter substrate-binding protein;protein_id=WP_032624781.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 97043 97810 . + . ID=gene-VMS06_RS19420;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=VMS06_RS19420 NZ_JAVXZI010000019.1 Protein Homology CDS 97043 97810 . + 0 ID=cds-WP_022647194.1;Parent=gene-VMS06_RS19420;Dbxref=GenBank:WP_022647194.1;Name=WP_022647194.1;Ontology_term=GO:0005524,GO:0015411,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225350.1;locus_tag=VMS06_RS19420;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_022647194.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 97807 98634 . + . ID=gene-VMS06_RS19425;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=VMS06_RS19425 NZ_JAVXZI010000019.1 Protein Homology CDS 97807 98634 . + 0 ID=cds-WP_046620593.1;Parent=gene-VMS06_RS19425;Dbxref=GenBank:WP_046620593.1;Name=WP_046620593.1;Ontology_term=GO:0055085,GO:0015411,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000029254.1;locus_tag=VMS06_RS19425;product=taurine ABC transporter permease TauC;protein_id=WP_046620593.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 98631 99482 . + . ID=gene-VMS06_RS19430;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=VMS06_RS19430 NZ_JAVXZI010000019.1 Protein Homology CDS 98631 99482 . + 0 ID=cds-WP_022647196.1;Parent=gene-VMS06_RS19430;Dbxref=GenBank:WP_022647196.1;Name=WP_022647196.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004028.1;locus_tag=VMS06_RS19430;product=taurine dioxygenase;protein_id=WP_022647196.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 99553 101277 . - . ID=gene-VMS06_RS19435;Name=olsF;gbkey=Gene;gene=olsF;gene_biotype=protein_coding;locus_tag=VMS06_RS19435 NZ_JAVXZI010000019.1 Protein Homology CDS 99553 101277 . - 0 ID=cds-WP_032624780.1;Parent=gene-VMS06_RS19435;Dbxref=GenBank:WP_032624780.1;Name=WP_032624780.1;gbkey=CDS;gene=olsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246884.1;locus_tag=VMS06_RS19435;product=bifunctional ornithine lipid synthase OlsF;protein_id=WP_032624780.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 101403 102377 . - . ID=gene-VMS06_RS19440;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=VMS06_RS19440 NZ_JAVXZI010000019.1 Protein Homology CDS 101403 102377 . - 0 ID=cds-WP_003859169.1;Parent=gene-VMS06_RS19440;Dbxref=GenBank:WP_003859169.1;Name=WP_003859169.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459367.1;locus_tag=VMS06_RS19440;product=porphobilinogen synthase;protein_id=WP_003859169.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 102830 105604 . + . ID=gene-VMS06_RS19445;Name=VMS06_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19445 NZ_JAVXZI010000019.1 Protein Homology CDS 102830 105604 . + 0 ID=cds-WP_063148329.1;Parent=gene-VMS06_RS19445;Dbxref=GenBank:WP_063148329.1;Name=WP_063148329.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010427980.1;locus_tag=VMS06_RS19445;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_063148329.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 105692 106318 . + . ID=gene-VMS06_RS19450;Name=VMS06_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19450 NZ_JAVXZI010000019.1 Protein Homology CDS 105692 106318 . + 0 ID=cds-WP_022647199.1;Parent=gene-VMS06_RS19450;Dbxref=GenBank:WP_022647199.1;Name=WP_022647199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694440.1;locus_tag=VMS06_RS19450;product=helix-turn-helix domain-containing protein;protein_id=WP_022647199.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 106321 107481 . - . ID=gene-VMS06_RS19455;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=VMS06_RS19455 NZ_JAVXZI010000019.1 Protein Homology CDS 106321 107481 . - 0 ID=cds-WP_063148330.1;Parent=gene-VMS06_RS19455;Dbxref=GenBank:WP_063148330.1;Name=WP_063148330.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859164.1;locus_tag=VMS06_RS19455;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_063148330.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 107686 108219 . + . ID=gene-VMS06_RS19460;Name=VMS06_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19460 NZ_JAVXZI010000019.1 Protein Homology CDS 107686 108219 . + 0 ID=cds-WP_023299419.1;Parent=gene-VMS06_RS19460;Dbxref=GenBank:WP_023299419.1;Name=WP_023299419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848145.1;locus_tag=VMS06_RS19460;product=isochorismatase family protein;protein_id=WP_023299419.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 108333 109553 . + . ID=gene-VMS06_RS19465;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=VMS06_RS19465 NZ_JAVXZI010000019.1 Protein Homology CDS 108333 109553 . + 0 ID=cds-WP_063148331.1;Parent=gene-VMS06_RS19465;Dbxref=GenBank:WP_063148331.1;Name=WP_063148331.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809941.1;locus_tag=VMS06_RS19465;product=peptide antibiotic transporter SbmA;protein_id=WP_063148331.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 109566 110663 . + . ID=gene-VMS06_RS19470;Name=VMS06_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19470 NZ_JAVXZI010000019.1 Protein Homology CDS 109566 110663 . + 0 ID=cds-WP_063148332.1;Parent=gene-VMS06_RS19470;Dbxref=GenBank:WP_063148332.1;Name=WP_063148332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571319.1;locus_tag=VMS06_RS19470;product=DUF1615 domain-containing protein;protein_id=WP_063148332.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 110664 110966 . - . ID=gene-VMS06_RS19475;Name=VMS06_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19475 NZ_JAVXZI010000019.1 Protein Homology CDS 110664 110966 . - 0 ID=cds-WP_063148333.1;Parent=gene-VMS06_RS19475;Dbxref=GenBank:WP_063148333.1;Name=WP_063148333.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859159.1;locus_tag=VMS06_RS19475;product=DUF2755 family protein;protein_id=WP_063148333.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 111215 111433 . + . ID=gene-VMS06_RS19480;Name=VMS06_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19480 NZ_JAVXZI010000019.1 Protein Homology CDS 111215 111433 . + 0 ID=cds-WP_022647204.1;Parent=gene-VMS06_RS19480;Dbxref=GenBank:WP_022647204.1;Name=WP_022647204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571318.1;locus_tag=VMS06_RS19480;product=DUF2754 domain-containing protein;protein_id=WP_022647204.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 111437 112534 . - . ID=gene-VMS06_RS19485;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=VMS06_RS19485 NZ_JAVXZI010000019.1 Protein Homology CDS 111437 112534 . - 0 ID=cds-WP_063150959.1;Parent=gene-VMS06_RS19485;Dbxref=GenBank:WP_063150959.1;Name=WP_063150959.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099379.1;locus_tag=VMS06_RS19485;product=D-alanine--D-alanine ligase;protein_id=WP_063150959.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 112639 113322 . + . ID=gene-VMS06_RS19490;Name=VMS06_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19490 NZ_JAVXZI010000019.1 Protein Homology CDS 112639 113322 . + 0 ID=cds-WP_063843898.1;Parent=gene-VMS06_RS19490;Dbxref=GenBank:WP_063843898.1;Name=WP_063843898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503284.1;locus_tag=VMS06_RS19490;product=extensin-like domain-containing protein;protein_id=WP_063843898.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 113492 114715 . + . ID=gene-VMS06_RS19495;Name=VMS06_RS19495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19495 NZ_JAVXZI010000019.1 Protein Homology CDS 113492 114715 . + 0 ID=cds-WP_023299423.1;Parent=gene-VMS06_RS19495;Dbxref=GenBank:WP_023299423.1;Name=WP_023299423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885242.1;locus_tag=VMS06_RS19495;product=multidrug efflux MFS transporter;protein_id=WP_023299423.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 114915 115175 . + . ID=gene-VMS06_RS19500;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=VMS06_RS19500 NZ_JAVXZI010000019.1 Protein Homology CDS 114915 115175 . + 0 ID=cds-WP_003859148.1;Parent=gene-VMS06_RS19500;Dbxref=GenBank:WP_003859148.1;Name=WP_003859148.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004386850.1;locus_tag=VMS06_RS19500;product=anti-adapter protein IraP;protein_id=WP_003859148.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 115469 115789 . + . ID=gene-VMS06_RS19505;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=VMS06_RS19505 NZ_JAVXZI010000019.1 Protein Homology CDS 115469 115789 . + 0 ID=cds-WP_022647208.1;Parent=gene-VMS06_RS19505;Dbxref=GenBank:WP_022647208.1;Name=WP_022647208.1;gbkey=CDS;gene=psiF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459379.1;locus_tag=VMS06_RS19505;product=phosphate starvation-inducible protein PsiF;protein_id=WP_022647208.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 115892 116995 . + . ID=gene-VMS06_RS19510;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;gene_synonym=dgcC;locus_tag=VMS06_RS19510 NZ_JAVXZI010000019.1 Protein Homology CDS 115892 116995 . + 0 ID=cds-WP_023305562.1;Parent=gene-VMS06_RS19510;Dbxref=GenBank:WP_023305562.1;Name=WP_023305562.1;gbkey=CDS;gene=adrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003859146.1;locus_tag=VMS06_RS19510;product=diguanylate cyclase AdrA;protein_id=WP_023305562.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 117012 117821 . - . ID=gene-VMS06_RS19515;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=VMS06_RS19515 NZ_JAVXZI010000019.1 Protein Homology CDS 117012 117821 . - 0 ID=cds-WP_038415461.1;Parent=gene-VMS06_RS19515;Dbxref=GenBank:WP_038415461.1;Name=WP_038415461.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459381.1;locus_tag=VMS06_RS19515;product=pyrroline-5-carboxylate reductase;protein_id=WP_038415461.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 117919 118377 . + . ID=gene-VMS06_RS19520;Name=VMS06_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19520 NZ_JAVXZI010000019.1 Protein Homology CDS 117919 118377 . + 0 ID=cds-WP_022647211.1;Parent=gene-VMS06_RS19520;Dbxref=GenBank:WP_022647211.1;Name=WP_022647211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016263.1;locus_tag=VMS06_RS19520;product=YaiI/YqxD family protein;protein_id=WP_022647211.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 118522 119046 . + . ID=gene-VMS06_RS19525;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=VMS06_RS19525 NZ_JAVXZI010000019.1 Protein Homology CDS 118522 119046 . + 0 ID=cds-WP_022647212.1;Parent=gene-VMS06_RS19525;Dbxref=GenBank:WP_022647212.1;Name=WP_022647212.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882735.1;locus_tag=VMS06_RS19525;product=shikimate kinase AroL;protein_id=WP_022647212.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 119091 119282 . + . ID=gene-VMS06_RS19530;Name=yaiA;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=VMS06_RS19530 NZ_JAVXZI010000019.1 Protein Homology CDS 119091 119282 . + 0 ID=cds-WP_023305565.1;Parent=gene-VMS06_RS19530;Dbxref=GenBank:WP_023305565.1;Name=WP_023305565.1;gbkey=CDS;gene=yaiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002890278.1;locus_tag=VMS06_RS19530;product=protein YaiA;protein_id=WP_023305565.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 119519 120196 . + . ID=gene-VMS06_RS19535;Name=VMS06_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19535 NZ_JAVXZI010000019.1 Protein Homology CDS 119519 120196 . + 0 ID=cds-WP_003859133.1;Parent=gene-VMS06_RS19535;Dbxref=GenBank:WP_003859133.1;Name=WP_003859133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001276435.1;locus_tag=VMS06_RS19535;product=AroM family protein;protein_id=WP_003859133.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 120268 120555 . + . ID=gene-VMS06_RS19540;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=VMS06_RS19540 NZ_JAVXZI010000019.1 Protein Homology CDS 120268 120555 . + 0 ID=cds-WP_003859131.1;Parent=gene-VMS06_RS19540;Dbxref=GenBank:WP_003859131.1;Name=WP_003859131.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428016.1;locus_tag=VMS06_RS19540;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_003859131.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 120603 121517 . - . ID=gene-VMS06_RS19545;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=VMS06_RS19545 NZ_JAVXZI010000019.1 Protein Homology CDS 120603 121517 . - 0 ID=cds-WP_006809928.1;Parent=gene-VMS06_RS19545;Dbxref=GenBank:WP_006809928.1;Name=WP_006809928.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=VMS06_RS19545;product=recombination-associated protein RdgC;protein_id=WP_006809928.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 121641 122546 . + . ID=gene-VMS06_RS19550;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=VMS06_RS19550 NZ_JAVXZI010000019.1 Protein Homology CDS 121641 122546 . + 0 ID=cds-WP_063148335.1;Parent=gene-VMS06_RS19550;Dbxref=GenBank:WP_063148335.1;Name=WP_063148335.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694434.1;locus_tag=VMS06_RS19550;product=fructokinase;protein_id=WP_063148335.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 122635 125766 . - . ID=gene-VMS06_RS19555;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=VMS06_RS19555 NZ_JAVXZI010000019.1 Protein Homology CDS 122635 125766 . - 0 ID=cds-WP_063148336.1;Parent=gene-VMS06_RS19555;Dbxref=GenBank:WP_063148336.1;Name=WP_063148336.1;Ontology_term=GO:0006260,GO:0004527;gbkey=CDS;gene=sbcC;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183154.1;locus_tag=VMS06_RS19555;product=exonuclease subunit SbcC;protein_id=WP_063148336.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 125763 126968 . - . ID=gene-VMS06_RS19560;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=VMS06_RS19560 NZ_JAVXZI010000019.1 Protein Homology CDS 125763 126968 . - 0 ID=cds-WP_032624766.1;Parent=gene-VMS06_RS19560;Dbxref=GenBank:WP_032624766.1;Name=WP_032624766.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503266.1;locus_tag=VMS06_RS19560;product=exonuclease subunit SbcD;protein_id=WP_032624766.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 127156 127845 . + . ID=gene-VMS06_RS19565;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=VMS06_RS19565 NZ_JAVXZI010000019.1 Protein Homology CDS 127156 127845 . + 0 ID=cds-WP_003859122.1;Parent=gene-VMS06_RS19565;Dbxref=GenBank:WP_003859122.1;Name=WP_003859122.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=VMS06_RS19565;product=phosphate response regulator transcription factor PhoB;protein_id=WP_003859122.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 127867 129162 . + . ID=gene-VMS06_RS19570;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=VMS06_RS19570 NZ_JAVXZI010000019.1 Protein Homology CDS 127867 129162 . + 0 ID=cds-WP_023299433.1;Parent=gene-VMS06_RS19570;Dbxref=GenBank:WP_023299433.1;Name=WP_023299433.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010428028.1;locus_tag=VMS06_RS19570;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_023299433.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 129572 130891 . + . ID=gene-VMS06_RS19575;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=VMS06_RS19575 NZ_JAVXZI010000019.1 Protein Homology CDS 129572 130891 . + 0 ID=cds-WP_003859118.1;Parent=gene-VMS06_RS19575;Dbxref=GenBank:WP_003859118.1;Name=WP_003859118.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459394.1;locus_tag=VMS06_RS19575;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_003859118.1;transl_table=11 NZ_JAVXZI010000019.1 RefSeq gene 130973 132346 . + . ID=gene-VMS06_RS19580;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=VMS06_RS19580 NZ_JAVXZI010000019.1 Protein Homology CDS 130973 132346 . + 0 ID=cds-WP_017383160.1;Parent=gene-VMS06_RS19580;Dbxref=GenBank:WP_017383160.1;Name=WP_017383160.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383160.1;locus_tag=VMS06_RS19580;product=proline-specific permease ProY;protein_id=WP_017383160.1;transl_table=11 ##sequence-region NZ_JAVXZI010000020.1 1 113951 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000020.1 RefSeq region 1 113951 . + . ID=NZ_JAVXZI010000020.1:1..113951;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000020.1 RefSeq gene 1 109 . + . ID=gene-VMS06_RS19585;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VMS06_RS19585;partial=true;start_range=.,1 NZ_JAVXZI010000020.1 cmsearch rRNA 1 109 . + . ID=rna-VMS06_RS19585;Parent=gene-VMS06_RS19585;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS19585;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000020.1 cmsearch exon 1 109 . + . ID=exon-VMS06_RS19585-1;Parent=rna-VMS06_RS19585;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS19585;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000020.1 RefSeq gene 209 712 . - . ID=gene-VMS06_RS19590;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=VMS06_RS19590 NZ_JAVXZI010000020.1 Protein Homology CDS 209 712 . - 0 ID=cds-WP_022649861.1;Parent=gene-VMS06_RS19590;Dbxref=GenBank:WP_022649861.1;Name=WP_022649861.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861899.1;locus_tag=VMS06_RS19590;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_022649861.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 709 1293 . - . ID=gene-VMS06_RS19595;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=VMS06_RS19595 NZ_JAVXZI010000020.1 Protein Homology CDS 709 1293 . - 0 ID=cds-WP_063148338.1;Parent=gene-VMS06_RS19595;Dbxref=GenBank:WP_063148338.1;Name=WP_063148338.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694040.1;locus_tag=VMS06_RS19595;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_063148338.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 1362 1631 . + . ID=gene-VMS06_RS19600;Name=VMS06_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19600 NZ_JAVXZI010000020.1 Protein Homology CDS 1362 1631 . + 0 ID=cds-WP_003861904.1;Parent=gene-VMS06_RS19600;Dbxref=GenBank:WP_003861904.1;Name=WP_003861904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=VMS06_RS19600;product=YihD family protein;protein_id=WP_003861904.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 1707 2693 . + . ID=gene-VMS06_RS19605;Name=VMS06_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19605 NZ_JAVXZI010000020.1 Protein Homology CDS 1707 2693 . + 0 ID=cds-WP_022649859.1;Parent=gene-VMS06_RS19605;Dbxref=GenBank:WP_022649859.1;Name=WP_022649859.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224318.1;locus_tag=VMS06_RS19605;product=serine/threonine protein kinase;protein_id=WP_022649859.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 2721 3344 . + . ID=gene-VMS06_RS19610;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=VMS06_RS19610 NZ_JAVXZI010000020.1 Protein Homology CDS 2721 3344 . + 0 ID=cds-WP_022649858.1;Parent=gene-VMS06_RS19610;Dbxref=GenBank:WP_022649858.1;Name=WP_022649858.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224319.1;locus_tag=VMS06_RS19610;product=thiol:disulfide interchange protein DsbA;protein_id=WP_022649858.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 3366 4274 . - . ID=gene-VMS06_RS19615;Name=VMS06_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19615 NZ_JAVXZI010000020.1 Protein Homology CDS 3366 4274 . - 0 ID=cds-WP_063148354.1;Parent=gene-VMS06_RS19615;Dbxref=GenBank:WP_063148354.1;Name=WP_063148354.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833808.1;locus_tag=VMS06_RS19615;product=acyltransferase;protein_id=WP_063148354.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 4714 7506 . + . ID=gene-VMS06_RS19620;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=VMS06_RS19620 NZ_JAVXZI010000020.1 Protein Homology CDS 4714 7506 . + 0 ID=cds-WP_045308732.1;Parent=gene-VMS06_RS19620;Dbxref=GenBank:WP_045308732.1;Name=WP_045308732.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418300.1;locus_tag=VMS06_RS19620;product=DNA polymerase I;protein_id=WP_045308732.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 7673 7720 . + . ID=gene-VMS06_RS22965;Name=spfP;gbkey=Gene;gene=spfP;gene_biotype=protein_coding;locus_tag=VMS06_RS22965 NZ_JAVXZI010000020.1 Protein Homology CDS 7673 7720 . + 0 ID=cds-WP_071892919.1;Parent=gene-VMS06_RS22965;Dbxref=GenBank:WP_071892919.1;Name=WP_071892919.1;gbkey=CDS;gene=spfP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_013606034.1;locus_tag=VMS06_RS22965;product=small protein SpfP;protein_id=WP_071892919.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 7818 8447 . - . ID=gene-VMS06_RS19625;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=VMS06_RS19625 NZ_JAVXZI010000020.1 Protein Homology CDS 7818 8447 . - 0 ID=cds-WP_003861913.1;Parent=gene-VMS06_RS19625;Dbxref=GenBank:WP_003861913.1;Name=WP_003861913.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436812.1;locus_tag=VMS06_RS19625;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_003861913.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 9028 9543 . + . ID=gene-VMS06_RS19630;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=VMS06_RS19630 NZ_JAVXZI010000020.1 Protein Homology CDS 9028 9543 . + 0 ID=cds-WP_022649854.1;Parent=gene-VMS06_RS19630;Dbxref=GenBank:WP_022649854.1;Name=WP_022649854.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883987.1;locus_tag=VMS06_RS19630;product=Der GTPase-activating protein YihI;protein_id=WP_022649854.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 9732 11105 . + . ID=gene-VMS06_RS19635;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=VMS06_RS19635 NZ_JAVXZI010000020.1 Protein Homology CDS 9732 11105 . + 0 ID=cds-WP_032626916.1;Parent=gene-VMS06_RS19635;Dbxref=GenBank:WP_032626916.1;Name=WP_032626916.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121847.1;locus_tag=VMS06_RS19635;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_032626916.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 11206 11316 . - . ID=gene-VMS06_RS19640;Name=VMS06_RS19640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19640 NZ_JAVXZI010000020.1 Protein Homology CDS 11206 11316 . - 0 ID=cds-WP_017382667.1;Parent=gene-VMS06_RS19640;Dbxref=GenBank:WP_017382667.1;Name=WP_017382667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791260.1;locus_tag=VMS06_RS19640;product=YshB family small membrane protein;protein_id=WP_017382667.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 11428 12840 . - . ID=gene-VMS06_RS19645;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=VMS06_RS19645 NZ_JAVXZI010000020.1 Protein Homology CDS 11428 12840 . - 0 ID=cds-WP_038416956.1;Parent=gene-VMS06_RS19645;Dbxref=GenBank:WP_038416956.1;Name=WP_038416956.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=VMS06_RS19645;product=nitrogen regulation protein NR(I);protein_id=WP_038416956.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 12852 13901 . - . ID=gene-VMS06_RS19650;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=VMS06_RS19650 NZ_JAVXZI010000020.1 Protein Homology CDS 12852 13901 . - 0 ID=cds-WP_003861923.1;Parent=gene-VMS06_RS19650;Dbxref=GenBank:WP_003861923.1;Name=WP_003861923.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224326.1;locus_tag=VMS06_RS19650;product=nitrogen regulation protein NR(II);protein_id=WP_003861923.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 14069 15478 . - . ID=gene-VMS06_RS19655;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=VMS06_RS19655 NZ_JAVXZI010000020.1 Protein Homology CDS 14069 15478 . - 0 ID=cds-WP_003861925.1;Parent=gene-VMS06_RS19655;Dbxref=GenBank:WP_003861925.1;Name=WP_003861925.1;Ontology_term=GO:0008152,GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=metabolic process|0008152||IEA,L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=VMS06_RS19655;product=glutamate--ammonia ligase;protein_id=WP_003861925.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 15856 17679 . + . ID=gene-VMS06_RS19660;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=VMS06_RS19660 NZ_JAVXZI010000020.1 Protein Homology CDS 15856 17679 . + 0 ID=cds-WP_022649851.1;Parent=gene-VMS06_RS19660;Dbxref=GenBank:WP_022649851.1;Name=WP_022649851.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224329.1;locus_tag=VMS06_RS19660;product=ribosome-dependent GTPase TypA;protein_id=WP_022649851.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 17759 18445 . - . ID=gene-VMS06_RS19665;Name=ompL;gbkey=Gene;gene=ompL;gene_biotype=protein_coding;locus_tag=VMS06_RS19665 NZ_JAVXZI010000020.1 Protein Homology CDS 17759 18445 . - 0 ID=cds-WP_032626918.1;Parent=gene-VMS06_RS19665;Dbxref=GenBank:WP_032626918.1;Name=WP_032626918.1;gbkey=CDS;gene=ompL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885758.1;locus_tag=VMS06_RS19665;product=porin OmpL;protein_id=WP_032626918.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 18520 19944 . - . ID=gene-VMS06_RS19670;Name=VMS06_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19670 NZ_JAVXZI010000020.1 Protein Homology CDS 18520 19944 . - 0 ID=cds-WP_022649849.1;Parent=gene-VMS06_RS19670;Dbxref=GenBank:WP_022649849.1;Name=WP_022649849.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808724.1;locus_tag=VMS06_RS19670;product=MFS transporter;protein_id=WP_022649849.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 19988 21370 . - . ID=gene-VMS06_RS19675;Name=VMS06_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19675 NZ_JAVXZI010000020.1 Protein Homology CDS 19988 21370 . - 0 ID=cds-WP_022649848.1;Parent=gene-VMS06_RS19675;Dbxref=GenBank:WP_022649848.1;Name=WP_022649848.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885756.1;locus_tag=VMS06_RS19675;product=MFS transporter;protein_id=WP_022649848.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 21416 23440 . - . ID=gene-VMS06_RS19680;Name=VMS06_RS19680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19680 NZ_JAVXZI010000020.1 Protein Homology CDS 21416 23440 . - 0 ID=cds-WP_063148339.1;Parent=gene-VMS06_RS19680;Dbxref=GenBank:WP_063148339.1;Name=WP_063148339.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006179113.1;locus_tag=VMS06_RS19680;product=alpha-glucosidase;protein_id=WP_063148339.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 23457 24698 . - . ID=gene-VMS06_RS19685;Name=yihS;gbkey=Gene;gene=yihS;gene_biotype=protein_coding;locus_tag=VMS06_RS19685 NZ_JAVXZI010000020.1 Protein Homology CDS 23457 24698 . - 0 ID=cds-WP_063148340.1;Parent=gene-VMS06_RS19685;Dbxref=GenBank:WP_063148340.1;Name=WP_063148340.1;gbkey=CDS;gene=yihS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462901.1;locus_tag=VMS06_RS19685;product=sulfoquinovose isomerase;protein_id=WP_063148340.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 24713 25588 . - . ID=gene-VMS06_RS19690;Name=yihT;gbkey=Gene;gene=yihT;gene_biotype=protein_coding;locus_tag=VMS06_RS19690 NZ_JAVXZI010000020.1 Protein Homology CDS 24713 25588 . - 0 ID=cds-WP_063148341.1;Parent=gene-VMS06_RS19690;Dbxref=GenBank:WP_063148341.1;Name=WP_063148341.1;gbkey=CDS;gene=yihT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172242.1;locus_tag=VMS06_RS19690;product=sulfofructosephosphate aldolase;protein_id=WP_063148341.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 25606 26496 . - . ID=gene-VMS06_RS19695;Name=yihU;gbkey=Gene;gene=yihU;gene_biotype=protein_coding;locus_tag=VMS06_RS19695 NZ_JAVXZI010000020.1 Protein Homology CDS 25606 26496 . - 0 ID=cds-WP_022649844.1;Parent=gene-VMS06_RS19695;Dbxref=GenBank:WP_022649844.1;Name=WP_022649844.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yihU;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172241.1;locus_tag=VMS06_RS19695;product=sulfolactaldehyde 3-reductase;protein_id=WP_022649844.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 26652 27548 . + . ID=gene-VMS06_RS19700;Name=VMS06_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19700 NZ_JAVXZI010000020.1 Protein Homology CDS 26652 27548 . + 0 ID=cds-WP_063148342.1;Parent=gene-VMS06_RS19700;Dbxref=GenBank:WP_063148342.1;Name=WP_063148342.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462904.3;locus_tag=VMS06_RS19700;product=sugar kinase;protein_id=WP_063148342.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 27583 28383 . + . ID=gene-VMS06_RS19705;Name=VMS06_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19705 NZ_JAVXZI010000020.1 Protein Homology CDS 27583 28383 . + 0 ID=cds-WP_023298924.1;Parent=gene-VMS06_RS19705;Dbxref=GenBank:WP_023298924.1;Name=WP_023298924.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861944.1;locus_tag=VMS06_RS19705;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_023298924.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 28502 29101 . + . ID=gene-VMS06_RS19710;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=VMS06_RS19710 NZ_JAVXZI010000020.1 Protein Homology CDS 28502 29101 . + 0 ID=cds-WP_023315056.1;Parent=gene-VMS06_RS19710;Dbxref=GenBank:WP_023315056.1;Name=WP_023315056.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462906.1;locus_tag=VMS06_RS19710;product=glucose-1-phosphatase;protein_id=WP_023315056.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 29095 29976 . + . ID=gene-VMS06_RS19715;Name=VMS06_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19715 NZ_JAVXZI010000020.1 Protein Homology CDS 29095 29976 . + 0 ID=cds-WP_023298923.1;Parent=gene-VMS06_RS19715;Dbxref=GenBank:WP_023298923.1;Name=WP_023298923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462907.1;locus_tag=VMS06_RS19715;product=virulence factor BrkB family protein;protein_id=WP_023298923.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 29973 30410 . + . ID=gene-VMS06_RS19720;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=VMS06_RS19720 NZ_JAVXZI010000020.1 Protein Homology CDS 29973 30410 . + 0 ID=cds-WP_015569909.1;Parent=gene-VMS06_RS19720;Dbxref=GenBank:WP_015569909.1;Name=WP_015569909.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=VMS06_RS19720;product=D-aminoacyl-tRNA deacylase;protein_id=WP_015569909.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 30455 31396 . + . ID=gene-VMS06_RS19725;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=VMS06_RS19725 NZ_JAVXZI010000020.1 Protein Homology CDS 30455 31396 . + 0 ID=cds-WP_022649838.1;Parent=gene-VMS06_RS19725;Dbxref=GenBank:WP_022649838.1;Name=WP_022649838.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=VMS06_RS19725;product=fatty acid biosynthesis protein FabY;protein_id=WP_022649838.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 31405 32325 . - . ID=gene-VMS06_RS19730;Name=VMS06_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19730 NZ_JAVXZI010000020.1 Protein Homology CDS 31405 32325 . - 0 ID=cds-WP_063148343.1;Parent=gene-VMS06_RS19730;Dbxref=GenBank:WP_063148343.1;Name=WP_063148343.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861954.1;locus_tag=VMS06_RS19730;product=alpha/beta hydrolase;protein_id=WP_063148343.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 32525 32767 . + . ID=gene-VMS06_RS19735;Name=VMS06_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19735 NZ_JAVXZI010000020.1 Protein Homology CDS 32525 32767 . + 0 ID=cds-WP_023298920.1;Parent=gene-VMS06_RS19735;Dbxref=GenBank:WP_023298920.1;Name=WP_023298920.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016162035.1;locus_tag=VMS06_RS19735;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_023298920.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 32770 33141 . + . ID=gene-VMS06_RS19740;Name=VMS06_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19740 NZ_JAVXZI010000020.1 Protein Homology CDS 32770 33141 . + 0 ID=cds-WP_080298797.1;Parent=gene-VMS06_RS19740;Dbxref=GenBank:WP_080298797.1;Name=WP_080298797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382676.1;locus_tag=VMS06_RS19740;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_080298797.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 33181 34110 . - . ID=gene-VMS06_RS19745;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=VMS06_RS19745 NZ_JAVXZI010000020.1 Protein Homology CDS 33181 34110 . - 0 ID=cds-WP_022649835.1;Parent=gene-VMS06_RS19745;Dbxref=GenBank:WP_022649835.1;Name=WP_022649835.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=VMS06_RS19745;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_022649835.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 34107 34742 . - . ID=gene-VMS06_RS19750;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=VMS06_RS19750 NZ_JAVXZI010000020.1 Protein Homology CDS 34107 34742 . - 0 ID=cds-WP_006808711.1;Parent=gene-VMS06_RS19750;Dbxref=GenBank:WP_006808711.1;Name=WP_006808711.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224338.1;locus_tag=VMS06_RS19750;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_006808711.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 34739 35641 . - . ID=gene-VMS06_RS19755;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=VMS06_RS19755 NZ_JAVXZI010000020.1 Protein Homology CDS 34739 35641 . - 0 ID=cds-WP_063148344.1;Parent=gene-VMS06_RS19755;Dbxref=GenBank:WP_063148344.1;Name=WP_063148344.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224339.1;locus_tag=VMS06_RS19755;product=formate dehydrogenase subunit beta;protein_id=WP_063148344.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 35654 38704 . - . ID=gene-VMS06_RS19760;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=VMS06_RS19760 NZ_JAVXZI010000020.1 Protein Homology CDS 35654 38704 . - 0 ID=cds-WP_087878250.1;Parent=gene-VMS06_RS19760;Dbxref=GenBank:WP_087878250.1;Name=WP_087878250.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=VMS06_RS19760;product=formate dehydrogenase-N subunit alpha;protein_id=WP_087878250.1;transl_except=(pos:complement(38117..38119)%2Caa:Sec);transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 39075 39911 . + . ID=gene-VMS06_RS19765;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=VMS06_RS19765 NZ_JAVXZI010000020.1 Protein Homology CDS 39075 39911 . + 0 ID=cds-WP_045308722.1;Parent=gene-VMS06_RS19765;Dbxref=GenBank:WP_045308722.1;Name=WP_045308722.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015961042.1;locus_tag=VMS06_RS19765;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_045308722.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 40026 40238 . + . ID=gene-VMS06_RS19770;Name=VMS06_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19770 NZ_JAVXZI010000020.1 Protein Homology CDS 40026 40238 . + 0 ID=cds-WP_003861966.1;Parent=gene-VMS06_RS19770;Dbxref=GenBank:WP_003861966.1;Name=WP_003861966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224343.1;locus_tag=VMS06_RS19770;product=YdgH/BhsA/McbA family protein;protein_id=WP_003861966.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 40279 40602 . - . ID=gene-VMS06_RS19775;Name=VMS06_RS19775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19775 NZ_JAVXZI010000020.1 Protein Homology CDS 40279 40602 . - 0 ID=cds-WP_022649832.1;Parent=gene-VMS06_RS19775;Dbxref=GenBank:WP_022649832.1;Name=WP_022649832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=VMS06_RS19775;product=AzlD domain-containing protein;protein_id=WP_022649832.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 40602 41261 . - . ID=gene-VMS06_RS19780;Name=VMS06_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19780 NZ_JAVXZI010000020.1 Protein Homology CDS 40602 41261 . - 0 ID=cds-WP_003861971.1;Parent=gene-VMS06_RS19780;Dbxref=GenBank:WP_003861971.1;Name=WP_003861971.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133906.1;locus_tag=VMS06_RS19780;product=AzlC family ABC transporter permease;protein_id=WP_003861971.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 41365 41913 . + . ID=gene-VMS06_RS19785;Name=VMS06_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19785 NZ_JAVXZI010000020.1 Protein Homology CDS 41365 41913 . + 0 ID=cds-WP_022649830.1;Parent=gene-VMS06_RS19785;Dbxref=GenBank:WP_022649830.1;Name=WP_022649830.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=VMS06_RS19785;product=helix-turn-helix domain-containing protein;protein_id=WP_022649830.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 42379 42918 . + . ID=gene-VMS06_RS19790;Name=VMS06_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19790 NZ_JAVXZI010000020.1 Protein Homology CDS 42379 42918 . + 0 ID=cds-WP_022649829.1;Parent=gene-VMS06_RS19790;Dbxref=GenBank:WP_022649829.1;Name=WP_022649829.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369315.1;locus_tag=VMS06_RS19790;product=fimbrial protein;protein_id=WP_022649829.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 42978 43706 . + . ID=gene-VMS06_RS19795;Name=VMS06_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19795 NZ_JAVXZI010000020.1 Protein Homology CDS 42978 43706 . + 0 ID=cds-WP_022649828.1;Parent=gene-VMS06_RS19795;Dbxref=GenBank:WP_022649828.1;Name=WP_022649828.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007369314.1;locus_tag=VMS06_RS19795;product=fimbrial biogenesis chaperone;protein_id=WP_022649828.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 43742 46264 . + . ID=gene-VMS06_RS19800;Name=VMS06_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19800 NZ_JAVXZI010000020.1 Protein Homology CDS 43742 46264 . + 0 ID=cds-WP_051979836.1;Parent=gene-VMS06_RS19800;Dbxref=GenBank:WP_051979836.1;Name=WP_051979836.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459674.1;locus_tag=VMS06_RS19800;product=fimbria/pilus outer membrane usher protein;protein_id=WP_051979836.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 46284 47588 . + . ID=gene-VMS06_RS19805;Name=VMS06_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19805 NZ_JAVXZI010000020.1 Protein Homology CDS 46284 47588 . + 0 ID=cds-WP_022649826.1;Parent=gene-VMS06_RS19805;Dbxref=GenBank:WP_022649826.1;Name=WP_022649826.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016928116.1;locus_tag=VMS06_RS19805;product=fimbrial protein;protein_id=WP_022649826.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 47585 48289 . + . ID=gene-VMS06_RS19810;Name=VMS06_RS19810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19810 NZ_JAVXZI010000020.1 Protein Homology CDS 47585 48289 . + 0 ID=cds-WP_022649825.1;Parent=gene-VMS06_RS19810;Dbxref=GenBank:WP_022649825.1;Name=WP_022649825.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455910.1;locus_tag=VMS06_RS19810;product=fimbrial biogenesis chaperone;protein_id=WP_022649825.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 48321 48635 . - . ID=gene-VMS06_RS19815;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=VMS06_RS19815 NZ_JAVXZI010000020.1 Protein Homology CDS 48321 48635 . - 0 ID=cds-WP_022649824.1;Parent=gene-VMS06_RS19815;Dbxref=GenBank:WP_022649824.1;Name=WP_022649824.1;Ontology_term=GO:0019318,GO:0016857,GO:0062192,GO:0005737;gbkey=CDS;gene=rhaM;go_component=cytoplasm|0005737||IEA;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,L-rhamnose mutarotase activity|0062192||IEA;go_process=hexose metabolic process|0019318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653649.1;locus_tag=VMS06_RS19815;product=L-rhamnose mutarotase;protein_id=WP_022649824.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 48632 49780 . - . ID=gene-VMS06_RS19820;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=VMS06_RS19820 NZ_JAVXZI010000020.1 Protein Homology CDS 48632 49780 . - 0 ID=cds-WP_063148345.1;Parent=gene-VMS06_RS19820;Dbxref=GenBank:WP_063148345.1;Name=WP_063148345.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462925.1;locus_tag=VMS06_RS19820;product=lactaldehyde reductase;protein_id=WP_063148345.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 49916 50917 . - . ID=gene-VMS06_RS19825;Name=VMS06_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19825 NZ_JAVXZI010000020.1 Protein Homology CDS 49916 50917 . - 0 ID=cds-WP_038416935.1;Parent=gene-VMS06_RS19825;Dbxref=GenBank:WP_038416935.1;Name=WP_038416935.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808699.1;locus_tag=VMS06_RS19825;product=ABC transporter permease;protein_id=WP_038416935.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 50914 51918 . - . ID=gene-VMS06_RS19830;Name=VMS06_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19830 NZ_JAVXZI010000020.1 Protein Homology CDS 50914 51918 . - 0 ID=cds-WP_023305096.1;Parent=gene-VMS06_RS19830;Dbxref=GenBank:WP_023305096.1;Name=WP_023305096.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107471.1;locus_tag=VMS06_RS19830;product=ABC transporter permease;protein_id=WP_023305096.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 51918 53420 . - . ID=gene-VMS06_RS19835;Name=VMS06_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19835 NZ_JAVXZI010000020.1 Protein Homology CDS 51918 53420 . - 0 ID=cds-WP_063148346.1;Parent=gene-VMS06_RS19835;Dbxref=GenBank:WP_063148346.1;Name=WP_063148346.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861985.1;locus_tag=VMS06_RS19835;product=sugar ABC transporter ATP-binding protein;protein_id=WP_063148346.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 53520 54506 . - . ID=gene-VMS06_RS19840;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=VMS06_RS19840 NZ_JAVXZI010000020.1 Protein Homology CDS 53520 54506 . - 0 ID=cds-WP_023298909.1;Parent=gene-VMS06_RS19840;Dbxref=GenBank:WP_023298909.1;Name=WP_023298909.1;Ontology_term=GO:0015762,GO:0015153,GO:0033296,GO:0030288,GO:0055052;gbkey=CDS;gene=rhaS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=rhamnose transmembrane transporter activity|0015153||IEA,rhamnose binding|0033296||IEA;go_process=rhamnose transmembrane transport|0015762||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224362.1;locus_tag=VMS06_RS19840;product=rhamnose ABC transporter substrate-binding protein;protein_id=WP_023298909.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 54589 55419 . - . ID=gene-VMS06_RS19845;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=VMS06_RS19845 NZ_JAVXZI010000020.1 Protein Homology CDS 54589 55419 . - 0 ID=cds-WP_063148347.1;Parent=gene-VMS06_RS19845;Dbxref=GenBank:WP_063148347.1;Name=WP_063148347.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004107477.1;locus_tag=VMS06_RS19845;product=rhamnulose-1-phosphate aldolase;protein_id=WP_063148347.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 55541 56800 . - . ID=gene-VMS06_RS19850;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=VMS06_RS19850 NZ_JAVXZI010000020.1 Protein Homology CDS 55541 56800 . - 0 ID=cds-WP_063148348.1;Parent=gene-VMS06_RS19850;Dbxref=GenBank:WP_063148348.1;Name=WP_063148348.1;Ontology_term=GO:0019318,GO:0008740,GO:0030145;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA,manganese ion binding|0030145||IEA;go_process=hexose metabolic process|0019318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224364.1;locus_tag=VMS06_RS19850;product=L-rhamnose isomerase;protein_id=WP_063148348.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 56797 58266 . - . ID=gene-VMS06_RS19855;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=VMS06_RS19855 NZ_JAVXZI010000020.1 Protein Homology CDS 56797 58266 . - 0 ID=cds-WP_023298908.1;Parent=gene-VMS06_RS19855;Dbxref=GenBank:WP_023298908.1;Name=WP_023298908.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462928.1;locus_tag=VMS06_RS19855;product=rhamnulokinase;protein_id=WP_023298908.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 58568 59404 . + . ID=gene-VMS06_RS19865;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=VMS06_RS19865 NZ_JAVXZI010000020.1 Protein Homology CDS 58568 59404 . + 0 ID=cds-WP_063148350.1;Parent=gene-VMS06_RS19865;Dbxref=GenBank:WP_063148350.1;Name=WP_063148350.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462929.1;locus_tag=VMS06_RS19865;product=HTH-type transcriptional activator RhaS;protein_id=WP_063148350.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 59478 60326 . + . ID=gene-VMS06_RS19870;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=VMS06_RS19870 NZ_JAVXZI010000020.1 Protein Homology CDS 59478 60326 . + 0 ID=cds-WP_022649814.1;Parent=gene-VMS06_RS19870;Dbxref=GenBank:WP_022649814.1;Name=WP_022649814.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072366.1;locus_tag=VMS06_RS19870;product=HTH-type transcriptional activator RhaR;protein_id=WP_022649814.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 60327 61361 . - . ID=gene-VMS06_RS19875;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=VMS06_RS19875 NZ_JAVXZI010000020.1 Protein Homology CDS 60327 61361 . - 0 ID=cds-WP_022649813.1;Parent=gene-VMS06_RS19875;Dbxref=GenBank:WP_022649813.1;Name=WP_022649813.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224368.1;locus_tag=VMS06_RS19875;product=L-rhamnose/proton symporter RhaT;protein_id=WP_022649813.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 61650 62270 . + . ID=gene-VMS06_RS19880;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=VMS06_RS19880 NZ_JAVXZI010000020.1 Protein Homology CDS 61650 62270 . + 0 ID=cds-WP_003861999.1;Parent=gene-VMS06_RS19880;Dbxref=GenBank:WP_003861999.1;Name=WP_003861999.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=VMS06_RS19880;product=superoxide dismutase [Mn];protein_id=WP_003861999.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 62337 63011 . + . ID=gene-VMS06_RS19885;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=VMS06_RS19885 NZ_JAVXZI010000020.1 Protein Homology CDS 62337 63011 . + 0 ID=cds-WP_038416933.1;Parent=gene-VMS06_RS19885;Dbxref=GenBank:WP_038416933.1;Name=WP_038416933.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862001.1;locus_tag=VMS06_RS19885;product=6-hydroxyaminopurine reductase;protein_id=WP_038416933.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 63111 64484 . - . ID=gene-VMS06_RS19890;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=VMS06_RS19890 NZ_JAVXZI010000020.1 Protein Homology CDS 63111 64484 . - 0 ID=cds-WP_022649811.1;Parent=gene-VMS06_RS19890;Dbxref=GenBank:WP_022649811.1;Name=WP_022649811.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=VMS06_RS19890;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_022649811.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 64481 65179 . - . ID=gene-VMS06_RS19895;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=VMS06_RS19895 NZ_JAVXZI010000020.1 Protein Homology CDS 64481 65179 . - 0 ID=cds-WP_003862004.1;Parent=gene-VMS06_RS19895;Dbxref=GenBank:WP_003862004.1;Name=WP_003862004.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=VMS06_RS19895;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_003862004.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 65330 65836 . + . ID=gene-VMS06_RS19900;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=VMS06_RS19900 NZ_JAVXZI010000020.1 Protein Homology CDS 65330 65836 . + 0 ID=cds-WP_023298904.1;Parent=gene-VMS06_RS19900;Dbxref=GenBank:WP_023298904.1;Name=WP_023298904.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883960.1;locus_tag=VMS06_RS19900;product=cell-envelope stress modulator CpxP;protein_id=WP_023298904.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 65990 66874 . + . ID=gene-VMS06_RS19905;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=VMS06_RS19905 NZ_JAVXZI010000020.1 Protein Homology CDS 65990 66874 . + 0 ID=cds-WP_023298903.1;Parent=gene-VMS06_RS19905;Dbxref=GenBank:WP_023298903.1;Name=WP_023298903.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382698.1;locus_tag=VMS06_RS19905;product=CDF family cation-efflux transporter FieF;protein_id=WP_023298903.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 67059 68021 . + . ID=gene-VMS06_RS19910;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=VMS06_RS19910 NZ_JAVXZI010000020.1 Protein Homology CDS 67059 68021 . + 0 ID=cds-WP_003862009.1;Parent=gene-VMS06_RS19910;Dbxref=GenBank:WP_003862009.1;Name=WP_003862009.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=VMS06_RS19910;product=6-phosphofructokinase;protein_id=WP_003862009.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 68230 69219 . + . ID=gene-VMS06_RS19915;Name=VMS06_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19915 NZ_JAVXZI010000020.1 Protein Homology CDS 68230 69219 . + 0 ID=cds-WP_023298902.1;Parent=gene-VMS06_RS19915;Dbxref=GenBank:WP_023298902.1;Name=WP_023298902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=VMS06_RS19915;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_023298902.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 69331 70074 . + . ID=gene-VMS06_RS19920;Name=VMS06_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19920 NZ_JAVXZI010000020.1 Protein Homology CDS 69331 70074 . + 0 ID=cds-WP_032626946.1;Parent=gene-VMS06_RS19920;Dbxref=GenBank:WP_032626946.1;Name=WP_032626946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436923.1;locus_tag=VMS06_RS19920;product=CDP-diacylglycerol diphosphatase;protein_id=WP_032626946.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 70148 71452 . + . ID=gene-VMS06_RS19925;Name=VMS06_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19925 NZ_JAVXZI010000020.1 Protein Homology CDS 70148 71452 . + 0 ID=cds-WP_032103451.1;Parent=gene-VMS06_RS19925;Dbxref=GenBank:WP_032103451.1;Name=WP_032103451.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=VMS06_RS19925;product=SLC13 family permease;protein_id=WP_032103451.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 71500 72267 . - . ID=gene-VMS06_RS19930;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=VMS06_RS19930 NZ_JAVXZI010000020.1 Protein Homology CDS 71500 72267 . - 0 ID=cds-WP_003862019.1;Parent=gene-VMS06_RS19930;Dbxref=GenBank:WP_003862019.1;Name=WP_003862019.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229471.1;locus_tag=VMS06_RS19930;product=triose-phosphate isomerase;protein_id=WP_003862019.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 72379 72975 . - . ID=gene-VMS06_RS19935;Name=VMS06_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19935 NZ_JAVXZI010000020.1 Protein Homology CDS 72379 72975 . - 0 ID=cds-WP_022649805.1;Parent=gene-VMS06_RS19935;Dbxref=GenBank:WP_022649805.1;Name=WP_022649805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383094.1;locus_tag=VMS06_RS19935;product=DUF1454 family protein;protein_id=WP_022649805.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 73088 73507 . + . ID=gene-VMS06_RS19940;Name=VMS06_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19940 NZ_JAVXZI010000020.1 Protein Homology CDS 73088 73507 . + 0 ID=cds-WP_022649804.1;Parent=gene-VMS06_RS19940;Dbxref=GenBank:WP_022649804.1;Name=WP_022649804.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808672.1;locus_tag=VMS06_RS19940;product=DUF805 domain-containing protein;protein_id=WP_022649804.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 73508 74254 . - . ID=gene-VMS06_RS19945;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=VMS06_RS19945 NZ_JAVXZI010000020.1 Protein Homology CDS 73508 74254 . - 0 ID=cds-WP_022649803.1;Parent=gene-VMS06_RS19945;Dbxref=GenBank:WP_022649803.1;Name=WP_022649803.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312876.1;locus_tag=VMS06_RS19945;product=ferredoxin--NADP(+) reductase;protein_id=WP_022649803.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 74351 75361 . - . ID=gene-VMS06_RS19950;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=VMS06_RS19950 NZ_JAVXZI010000020.1 Protein Homology CDS 74351 75361 . - 0 ID=cds-WP_023307187.1;Parent=gene-VMS06_RS19950;Dbxref=GenBank:WP_023307187.1;Name=WP_023307187.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229467.1;locus_tag=VMS06_RS19950;product=class II fructose-bisphosphatase;protein_id=WP_023307187.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 75498 77006 . - . ID=gene-VMS06_RS19955;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=VMS06_RS19955 NZ_JAVXZI010000020.1 Protein Homology CDS 75498 77006 . - 0 ID=cds-WP_022649801.1;Parent=gene-VMS06_RS19955;Dbxref=GenBank:WP_022649801.1;Name=WP_022649801.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847857.1;locus_tag=VMS06_RS19955;product=glycerol kinase GlpK;protein_id=WP_022649801.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 77028 77873 . - . ID=gene-VMS06_RS19960;Name=VMS06_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS19960 NZ_JAVXZI010000020.1 Protein Homology CDS 77028 77873 . - 0 ID=cds-WP_022649800.1;Parent=gene-VMS06_RS19960;Dbxref=GenBank:WP_022649800.1;Name=WP_022649800.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229476.1;locus_tag=VMS06_RS19960;product=MIP/aquaporin family protein;protein_id=WP_022649800.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 78274 78513 . + . ID=gene-VMS06_RS19965;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=VMS06_RS19965 NZ_JAVXZI010000020.1 Protein Homology CDS 78274 78513 . + 0 ID=cds-WP_022649799.1;Parent=gene-VMS06_RS19965;Dbxref=GenBank:WP_022649799.1;Name=WP_022649799.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229475.1;locus_tag=VMS06_RS19965;product=septal ring assembly protein ZapB;protein_id=WP_022649799.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 79097 79582 . - . ID=gene-VMS06_RS19970;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=VMS06_RS19970 NZ_JAVXZI010000020.1 Protein Homology CDS 79097 79582 . - 0 ID=cds-WP_022649798.1;Parent=gene-VMS06_RS19970;Dbxref=GenBank:WP_022649798.1;Name=WP_022649798.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=VMS06_RS19970;product=ribonuclease E activity regulator RraA;protein_id=WP_022649798.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 79675 80601 . - . ID=gene-VMS06_RS19975;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=VMS06_RS19975 NZ_JAVXZI010000020.1 Protein Homology CDS 79675 80601 . - 0 ID=cds-WP_088581795.1;Parent=gene-VMS06_RS19975;Dbxref=GenBank:WP_088581795.1;Name=WP_088581795.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002431813.1;locus_tag=VMS06_RS19975;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_088581795.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 80664 81998 . - . ID=gene-VMS06_RS19980;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=VMS06_RS19980 NZ_JAVXZI010000020.1 Protein Homology CDS 80664 81998 . - 0 ID=cds-WP_022649796.1;Parent=gene-VMS06_RS19980;Dbxref=GenBank:WP_022649796.1;Name=WP_022649796.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=VMS06_RS19980;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_022649796.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 82008 82538 . - . ID=gene-VMS06_RS19985;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=VMS06_RS19985 NZ_JAVXZI010000020.1 Protein Homology CDS 82008 82538 . - 0 ID=cds-WP_022649795.1;Parent=gene-VMS06_RS19985;Dbxref=GenBank:WP_022649795.1;Name=WP_022649795.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224379.1;locus_tag=VMS06_RS19985;product=ATP-dependent protease subunit HslV;protein_id=WP_022649795.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 82633 83601 . - . ID=gene-VMS06_RS19990;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=VMS06_RS19990 NZ_JAVXZI010000020.1 Protein Homology CDS 82633 83601 . - 0 ID=cds-WP_017383099.1;Parent=gene-VMS06_RS19990;Dbxref=GenBank:WP_017383099.1;Name=WP_017383099.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383099.1;locus_tag=VMS06_RS19990;product=cell division protein FtsN;protein_id=WP_017383099.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 83694 84719 . - . ID=gene-VMS06_RS19995;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=VMS06_RS19995 NZ_JAVXZI010000020.1 Protein Homology CDS 83694 84719 . - 0 ID=cds-WP_022649794.1;Parent=gene-VMS06_RS19995;Dbxref=GenBank:WP_022649794.1;Name=WP_022649794.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885699.1;locus_tag=VMS06_RS19995;product=DNA-binding transcriptional regulator CytR;protein_id=WP_022649794.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 84839 87034 . - . ID=gene-VMS06_RS20000;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=VMS06_RS20000 NZ_JAVXZI010000020.1 Protein Homology CDS 84839 87034 . - 0 ID=cds-WP_063146861.1;Parent=gene-VMS06_RS20000;Dbxref=GenBank:WP_063146861.1;Name=WP_063146861.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462976.1;locus_tag=VMS06_RS20000;product=primosomal protein N';protein_id=WP_063146861.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 87235 87447 . + . ID=gene-VMS06_RS20005;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=VMS06_RS20005 NZ_JAVXZI010000020.1 Protein Homology CDS 87235 87447 . + 0 ID=cds-WP_003862040.1;Parent=gene-VMS06_RS20005;Dbxref=GenBank:WP_003862040.1;Name=WP_003862040.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709740.1;locus_tag=VMS06_RS20005;product=50S ribosomal protein L31;protein_id=WP_003862040.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 87496 87813 . - . ID=gene-VMS06_RS20010;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=VMS06_RS20010 NZ_JAVXZI010000020.1 Protein Homology CDS 87496 87813 . - 0 ID=cds-WP_006179183.1;Parent=gene-VMS06_RS20010;Dbxref=GenBank:WP_006179183.1;Name=WP_006179183.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=VMS06_RS20010;product=met regulon transcriptional regulator MetJ;protein_id=WP_006179183.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 88089 89249 . + . ID=gene-VMS06_RS20015;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=VMS06_RS20015 NZ_JAVXZI010000020.1 Protein Homology CDS 88089 89249 . + 0 ID=cds-WP_017383102.1;Parent=gene-VMS06_RS20015;Dbxref=GenBank:WP_017383102.1;Name=WP_017383102.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418374.1;locus_tag=VMS06_RS20015;product=cystathionine gamma-synthase;protein_id=WP_017383102.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 89252 91684 . + . ID=gene-VMS06_RS20020;Name=VMS06_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20020 NZ_JAVXZI010000020.1 Protein Homology CDS 89252 91684 . + 0 ID=cds-WP_023298896.1;Parent=gene-VMS06_RS20020;Dbxref=GenBank:WP_023298896.1;Name=WP_023298896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=VMS06_RS20020;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_023298896.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 91954 92844 . + . ID=gene-VMS06_RS20025;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=VMS06_RS20025 NZ_JAVXZI010000020.1 Protein Homology CDS 91954 92844 . + 0 ID=cds-WP_063148351.1;Parent=gene-VMS06_RS20025;Dbxref=GenBank:WP_063148351.1;Name=WP_063148351.1;Ontology_term=GO:0071265,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418376.1;locus_tag=VMS06_RS20025;product=methylenetetrahydrofolate reductase;protein_id=WP_063148351.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 92989 95169 . + . ID=gene-VMS06_RS20030;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=VMS06_RS20030 NZ_JAVXZI010000020.1 Protein Homology CDS 92989 95169 . + 0 ID=cds-WP_063148352.1;Parent=gene-VMS06_RS20030;Dbxref=GenBank:WP_063148352.1;Name=WP_063148352.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462987.1;locus_tag=VMS06_RS20030;product=catalase/peroxidase HPI;protein_id=WP_063148352.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 95261 96364 . - . ID=gene-VMS06_RS20035;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=VMS06_RS20035 NZ_JAVXZI010000020.1 Protein Homology CDS 95261 96364 . - 0 ID=cds-WP_023298894.1;Parent=gene-VMS06_RS20035;Dbxref=GenBank:WP_023298894.1;Name=WP_023298894.1;Ontology_term=GO:0019588,GO:0051596,GO:0008888,GO:0019147;gbkey=CDS;gene=gldA;go_function=glycerol dehydrogenase (NAD+) activity|0008888||IEA,(R)-aminopropanol dehydrogenase activity|0019147||IEA;go_process=anaerobic glycerol catabolic process|0019588||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462989.1;locus_tag=VMS06_RS20035;product=bifunctional L-1%2C2-propanediol dehydrogenase/glycerol dehydrogenase;protein_id=WP_023298894.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 96377 97039 . - . ID=gene-VMS06_RS20040;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=VMS06_RS20040 NZ_JAVXZI010000020.1 Protein Homology CDS 96377 97039 . - 0 ID=cds-WP_058646047.1;Parent=gene-VMS06_RS20040;Dbxref=GenBank:WP_058646047.1;Name=WP_058646047.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462990.1;locus_tag=VMS06_RS20040;product=fructose-6-phosphate aldolase;protein_id=WP_058646047.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 97168 97932 . - . ID=gene-VMS06_RS20045;Name=VMS06_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20045 NZ_JAVXZI010000020.1 Protein Homology CDS 97168 97932 . - 0 ID=cds-WP_023298892.1;Parent=gene-VMS06_RS20045;Dbxref=GenBank:WP_023298892.1;Name=WP_023298892.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885692.1;locus_tag=VMS06_RS20045;product=helix-turn-helix transcriptional regulator;protein_id=WP_023298892.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 98035 100686 . - . ID=gene-VMS06_RS20050;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=VMS06_RS20050 NZ_JAVXZI010000020.1 Protein Homology CDS 98035 100686 . - 0 ID=cds-WP_323630704.1;Parent=gene-VMS06_RS20050;Dbxref=GenBank:WP_323630704.1;Name=WP_323630704.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=VMS06_RS20050;product=phosphoenolpyruvate carboxylase;protein_id=WP_323630704.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 100961 102112 . - . ID=gene-VMS06_RS20055;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=VMS06_RS20055 NZ_JAVXZI010000020.1 Protein Homology CDS 100961 102112 . - 0 ID=cds-WP_063148353.1;Parent=gene-VMS06_RS20055;Dbxref=GenBank:WP_063148353.1;Name=WP_063148353.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224399.1;locus_tag=VMS06_RS20055;product=acetylornithine deacetylase;protein_id=WP_063148353.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 102201 103205 . + . ID=gene-VMS06_RS20060;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=VMS06_RS20060 NZ_JAVXZI010000020.1 Protein Homology CDS 102201 103205 . + 0 ID=cds-WP_023298889.1;Parent=gene-VMS06_RS20060;Dbxref=GenBank:WP_023298889.1;Name=WP_023298889.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=VMS06_RS20060;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_023298889.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 103212 103988 . + . ID=gene-VMS06_RS20065;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=VMS06_RS20065 NZ_JAVXZI010000020.1 Protein Homology CDS 103212 103988 . + 0 ID=cds-WP_094948456.1;Parent=gene-VMS06_RS20065;Dbxref=GenBank:WP_094948456.1;Name=WP_094948456.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463002.3;locus_tag=VMS06_RS20065;product=acetylglutamate kinase;protein_id=WP_094948456.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 104094 105467 . + . ID=gene-VMS06_RS20070;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=VMS06_RS20070 NZ_JAVXZI010000020.1 Protein Homology CDS 104094 105467 . + 0 ID=cds-WP_023307180.1;Parent=gene-VMS06_RS20070;Dbxref=GenBank:WP_023307180.1;Name=WP_023307180.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006179193.1;locus_tag=VMS06_RS20070;product=argininosuccinate lyase;protein_id=WP_023307180.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 105773 106690 . + . ID=gene-VMS06_RS20075;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=VMS06_RS20075 NZ_JAVXZI010000020.1 Protein Homology CDS 105773 106690 . + 0 ID=cds-WP_022649783.1;Parent=gene-VMS06_RS20075;Dbxref=GenBank:WP_022649783.1;Name=WP_022649783.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=VMS06_RS20075;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_022649783.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 106673 108073 . - . ID=gene-VMS06_RS20080;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=VMS06_RS20080 NZ_JAVXZI010000020.1 Protein Homology CDS 106673 108073 . - 0 ID=cds-WP_003862057.1;Parent=gene-VMS06_RS20080;Dbxref=GenBank:WP_003862057.1;Name=WP_003862057.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=VMS06_RS20080;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_003862057.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 108270 108908 . + . ID=gene-VMS06_RS20085;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=VMS06_RS20085 NZ_JAVXZI010000020.1 Protein Homology CDS 108270 108908 . + 0 ID=cds-WP_003862059.1;Parent=gene-VMS06_RS20085;Dbxref=GenBank:WP_003862059.1;Name=WP_003862059.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501784.1;locus_tag=VMS06_RS20085;product=HTH-type transcriptional repressor FabR;protein_id=WP_003862059.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 108918 109277 . + . ID=gene-VMS06_RS20090;Name=VMS06_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20090 NZ_JAVXZI010000020.1 Protein Homology CDS 108918 109277 . + 0 ID=cds-WP_017383113.1;Parent=gene-VMS06_RS20090;Dbxref=GenBank:WP_017383113.1;Name=WP_017383113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000814369.1;locus_tag=VMS06_RS20090;product=YijD family membrane protein;protein_id=WP_017383113.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 109368 110468 . - . ID=gene-VMS06_RS20095;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=VMS06_RS20095 NZ_JAVXZI010000020.1 Protein Homology CDS 109368 110468 . - 0 ID=cds-WP_058677361.1;Parent=gene-VMS06_RS20095;Dbxref=GenBank:WP_058677361.1;Name=WP_058677361.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312923.1;locus_tag=VMS06_RS20095;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_058677361.1;transl_table=11 NZ_JAVXZI010000020.1 cmsearch riboswitch 110573 110748 . + . ID=id-NZ_JAVXZI010000020.1:110573..110748;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVXZI010000020.1 RefSeq gene 110815 112662 . + . ID=gene-VMS06_RS20100;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=VMS06_RS20100 NZ_JAVXZI010000020.1 Protein Homology CDS 110815 112662 . + 0 ID=cds-WP_023330102.1;Parent=gene-VMS06_RS20100;Dbxref=GenBank:WP_023330102.1;Name=WP_023330102.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463009.1;locus_tag=VMS06_RS20100;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_023330102.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 112607 113458 . + . ID=gene-VMS06_RS20105;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=VMS06_RS20105 NZ_JAVXZI010000020.1 Protein Homology CDS 112607 113458 . + 0 ID=cds-WP_023298885.1;Parent=gene-VMS06_RS20105;Dbxref=GenBank:WP_023298885.1;Name=WP_023298885.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807849.1;locus_tag=VMS06_RS20105;product=glutamate racemase;protein_id=WP_023298885.1;transl_table=11 NZ_JAVXZI010000020.1 RefSeq gene 113843 113951 . + . ID=gene-VMS06_RS20110;Name=VMS06_RS20110;end_range=113951,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS20110;partial=true NZ_JAVXZI010000020.1 cmsearch rRNA 113843 113951 . + . ID=rna-VMS06_RS20110;Parent=gene-VMS06_RS20110;Dbxref=RFAM:RF00177;end_range=113951,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS20110;partial=true;product=16S ribosomal RNA NZ_JAVXZI010000020.1 cmsearch exon 113843 113951 . + . ID=exon-VMS06_RS20110-1;Parent=rna-VMS06_RS20110;Dbxref=RFAM:RF00177;end_range=113951,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS20110;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JAVXZI010000021.1 1 82078 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000021.1 RefSeq region 1 82078 . + . ID=NZ_JAVXZI010000021.1:1..82078;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000021.1 RefSeq gene 169 996 . - . ID=gene-VMS06_RS20115;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=VMS06_RS20115 NZ_JAVXZI010000021.1 Protein Homology CDS 169 996 . - 0 ID=cds-WP_074136400.1;Parent=gene-VMS06_RS20115;Dbxref=GenBank:WP_074136400.1;Name=WP_074136400.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463052.1;locus_tag=VMS06_RS20115;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_074136400.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 1190 4873 . + . ID=gene-VMS06_RS20120;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=VMS06_RS20120 NZ_JAVXZI010000021.1 Protein Homology CDS 1190 4873 . + 0 ID=cds-WP_063148454.1;Parent=gene-VMS06_RS20120;Dbxref=GenBank:WP_063148454.1;Name=WP_063148454.1;Ontology_term=GO:0071265,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224533.1;locus_tag=VMS06_RS20120;product=methionine synthase;protein_id=WP_063148454.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 4990 6621 . + . ID=gene-VMS06_RS20125;Name=VMS06_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20125 NZ_JAVXZI010000021.1 Protein Homology CDS 4990 6621 . + 0 ID=cds-WP_022646722.1;Parent=gene-VMS06_RS20125;Dbxref=GenBank:WP_022646722.1;Name=WP_022646722.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418444.1;locus_tag=VMS06_RS20125;product=Na/Pi cotransporter family protein;protein_id=WP_022646722.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq pseudogene 6716 6931 . + . ID=gene-VMS06_RS20130;Name=VMS06_RS20130;end_range=6931,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS20130;partial=true;pseudo=true NZ_JAVXZI010000021.1 Protein Homology CDS 6716 6931 . + 0 ID=cds-VMS06_RS20130;Parent=gene-VMS06_RS20130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=6931,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503412.1;locus_tag=VMS06_RS20130;partial=true;product=type II toxin-antitoxin system CcdA family antitoxin;pseudo=true;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 6945 7106 . + . ID=gene-VMS06_RS20135;Name=VMS06_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20135 NZ_JAVXZI010000021.1 Protein Homology CDS 6945 7106 . + 0 ID=cds-WP_080394701.1;Parent=gene-VMS06_RS20135;Dbxref=GenBank:WP_080394701.1;Name=WP_080394701.1;Ontology_term=GO:0006276,GO:0008657;gbkey=CDS;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) inhibitor activity|0008657||IEA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: protein motif:HMM:NF013965.7;locus_tag=VMS06_RS20135;product=CcdB family protein;protein_id=WP_080394701.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 7161 8033 . + . ID=gene-VMS06_RS20140;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=VMS06_RS20140 NZ_JAVXZI010000021.1 Protein Homology CDS 7161 8033 . + 0 ID=cds-WP_063148453.1;Parent=gene-VMS06_RS20140;Dbxref=GenBank:WP_063148453.1;Name=WP_063148453.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313032.1;locus_tag=VMS06_RS20140;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_063148453.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 8034 8306 . - . ID=gene-VMS06_RS20145;Name=VMS06_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20145 NZ_JAVXZI010000021.1 Protein Homology CDS 8034 8306 . - 0 ID=cds-WP_017382612.1;Parent=gene-VMS06_RS20145;Dbxref=GenBank:WP_017382612.1;Name=WP_017382612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463059.1;locus_tag=VMS06_RS20145;product=YjbD family protein;protein_id=WP_017382612.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 8357 9301 . - . ID=gene-VMS06_RS20150;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=VMS06_RS20150 NZ_JAVXZI010000021.1 Protein Homology CDS 8357 9301 . - 0 ID=cds-WP_063148452.1;Parent=gene-VMS06_RS20150;Dbxref=GenBank:WP_063148452.1;Name=WP_063148452.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860345.1;locus_tag=VMS06_RS20150;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_063148452.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 9395 10744 . - . ID=gene-VMS06_RS20155;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=VMS06_RS20155 NZ_JAVXZI010000021.1 Protein Homology CDS 9395 10744 . - 0 ID=cds-WP_022646727.1;Parent=gene-VMS06_RS20155;Dbxref=GenBank:WP_022646727.1;Name=WP_022646727.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224546.1;locus_tag=VMS06_RS20155;product=lysine-sensitive aspartokinase 3;protein_id=WP_022646727.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 11119 12768 . + . ID=gene-VMS06_RS20160;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=VMS06_RS20160 NZ_JAVXZI010000021.1 Protein Homology CDS 11119 12768 . + 0 ID=cds-WP_022646728.1;Parent=gene-VMS06_RS20160;Dbxref=GenBank:WP_022646728.1;Name=WP_022646728.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463086.1;locus_tag=VMS06_RS20160;product=glucose-6-phosphate isomerase;protein_id=WP_022646728.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 13135 13377 . + . ID=gene-VMS06_RS20165;Name=yjbE;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=VMS06_RS20165 NZ_JAVXZI010000021.1 Protein Homology CDS 13135 13377 . + 0 ID=cds-WP_003860341.1;Parent=gene-VMS06_RS20165;Dbxref=GenBank:WP_003860341.1;Name=WP_003860341.1;gbkey=CDS;gene=yjbE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313036.1;locus_tag=VMS06_RS20165;product=exopolysaccharide production protein YjbE;protein_id=WP_003860341.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 13441 14079 . + . ID=gene-VMS06_RS20170;Name=VMS06_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20170 NZ_JAVXZI010000021.1 Protein Homology CDS 13441 14079 . + 0 ID=cds-WP_003860339.1;Parent=gene-VMS06_RS20170;Dbxref=GenBank:WP_003860339.1;Name=WP_003860339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882855.1;locus_tag=VMS06_RS20170;product=YjbF family lipoprotein;protein_id=WP_003860339.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 14076 14813 . + . ID=gene-VMS06_RS20175;Name=VMS06_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20175 NZ_JAVXZI010000021.1 Protein Homology CDS 14076 14813 . + 0 ID=cds-WP_023305255.1;Parent=gene-VMS06_RS20175;Dbxref=GenBank:WP_023305255.1;Name=WP_023305255.1;Ontology_term=GO:0042603;gbkey=CDS;go_component=capsule|0042603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570167.1;locus_tag=VMS06_RS20175;product=capsule biosynthesis GfcC family protein;protein_id=WP_023305255.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 14813 16909 . + . ID=gene-VMS06_RS20180;Name=VMS06_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20180 NZ_JAVXZI010000021.1 Protein Homology CDS 14813 16909 . + 0 ID=cds-WP_023299084.1;Parent=gene-VMS06_RS20180;Dbxref=GenBank:WP_023299084.1;Name=WP_023299084.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463090.1;locus_tag=VMS06_RS20180;product=YjbH domain-containing protein;protein_id=WP_023299084.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 17088 17498 . + . ID=gene-VMS06_RS20185;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=VMS06_RS20185 NZ_JAVXZI010000021.1 Protein Homology CDS 17088 17498 . + 0 ID=cds-WP_000202963.1;Parent=gene-VMS06_RS20185;Dbxref=GenBank:WP_000202963.1;Name=WP_000202963.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418454.1;locus_tag=VMS06_RS20185;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_000202963.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 17595 18485 . - . ID=gene-VMS06_RS20190;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=VMS06_RS20190 NZ_JAVXZI010000021.1 Protein Homology CDS 17595 18485 . - 0 ID=cds-WP_003860332.1;Parent=gene-VMS06_RS20190;Dbxref=GenBank:WP_003860332.1;Name=WP_003860332.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463092.1;locus_tag=VMS06_RS20190;product=maltose ABC transporter permease MalG;protein_id=WP_003860332.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 18500 20044 . - . ID=gene-VMS06_RS20195;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=VMS06_RS20195 NZ_JAVXZI010000021.1 Protein Homology CDS 18500 20044 . - 0 ID=cds-WP_023299085.1;Parent=gene-VMS06_RS20195;Dbxref=GenBank:WP_023299085.1;Name=WP_023299085.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463093.1;locus_tag=VMS06_RS20195;product=maltose ABC transporter permease MalF;protein_id=WP_023299085.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 20166 21356 . - . ID=gene-VMS06_RS20200;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=VMS06_RS20200 NZ_JAVXZI010000021.1 Protein Homology CDS 20166 21356 . - 0 ID=cds-WP_022646733.1;Parent=gene-VMS06_RS20200;Dbxref=GenBank:WP_022646733.1;Name=WP_022646733.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=VMS06_RS20200;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_022646733.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 21728 22837 . + . ID=gene-VMS06_RS20205;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=VMS06_RS20205 NZ_JAVXZI010000021.1 Protein Homology CDS 21728 22837 . + 0 ID=cds-WP_003860329.1;Parent=gene-VMS06_RS20205;Dbxref=GenBank:WP_003860329.1;Name=WP_003860329.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=VMS06_RS20205;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_003860329.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 22880 24247 . + . ID=gene-VMS06_RS20210;Name=VMS06_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20210 NZ_JAVXZI010000021.1 Protein Homology CDS 22880 24247 . + 0 ID=cds-WP_032621777.1;Parent=gene-VMS06_RS20210;Dbxref=GenBank:WP_032621777.1;Name=WP_032621777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463096.1;locus_tag=VMS06_RS20210;product=maltoporin;protein_id=WP_032621777.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 24359 25303 . + . ID=gene-VMS06_RS20215;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=VMS06_RS20215 NZ_JAVXZI010000021.1 Protein Homology CDS 24359 25303 . + 0 ID=cds-WP_063148451.1;Parent=gene-VMS06_RS20215;Dbxref=GenBank:WP_063148451.1;Name=WP_063148451.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132669.1;locus_tag=VMS06_RS20215;product=maltose operon protein MalM;protein_id=WP_063148451.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 25476 25973 . + . ID=gene-VMS06_RS20220;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=VMS06_RS20220 NZ_JAVXZI010000021.1 Protein Homology CDS 25476 25973 . + 0 ID=cds-WP_022646736.1;Parent=gene-VMS06_RS20220;Dbxref=GenBank:WP_022646736.1;Name=WP_022646736.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709881.2;locus_tag=VMS06_RS20220;product=chorismate lyase;protein_id=WP_022646736.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 25986 26855 . + . ID=gene-VMS06_RS20225;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=VMS06_RS20225 NZ_JAVXZI010000021.1 Protein Homology CDS 25986 26855 . + 0 ID=cds-WP_045309058.1;Parent=gene-VMS06_RS20225;Dbxref=GenBank:WP_045309058.1;Name=WP_045309058.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810490.1;locus_tag=VMS06_RS20225;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_045309058.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 26945 29365 . - . ID=gene-VMS06_RS20230;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=VMS06_RS20230 NZ_JAVXZI010000021.1 Protein Homology CDS 26945 29365 . - 0 ID=cds-WP_022646738.1;Parent=gene-VMS06_RS20230;Dbxref=GenBank:WP_022646738.1;Name=WP_022646738.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463100.1;locus_tag=VMS06_RS20230;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_022646738.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 29520 29888 . + . ID=gene-VMS06_RS20235;Name=VMS06_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20235 NZ_JAVXZI010000021.1 Protein Homology CDS 29520 29888 . + 0 ID=cds-WP_006810487.1;Parent=gene-VMS06_RS20235;Dbxref=GenBank:WP_006810487.1;Name=WP_006810487.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382619.1;locus_tag=VMS06_RS20235;product=diacylglycerol kinase;protein_id=WP_006810487.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 29997 30605 . + . ID=gene-VMS06_RS20240;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=VMS06_RS20240 NZ_JAVXZI010000021.1 Protein Homology CDS 29997 30605 . + 0 ID=cds-WP_003860318.1;Parent=gene-VMS06_RS20240;Dbxref=GenBank:WP_003860318.1;Name=WP_003860318.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=VMS06_RS20240;product=transcriptional repressor LexA;protein_id=WP_003860318.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 30669 32006 . + . ID=gene-VMS06_RS20245;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=VMS06_RS20245 NZ_JAVXZI010000021.1 Protein Homology CDS 30669 32006 . + 0 ID=cds-WP_058646370.1;Parent=gene-VMS06_RS20245;Dbxref=GenBank:WP_058646370.1;Name=WP_058646370.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882844.1;locus_tag=VMS06_RS20245;product=MATE family efflux transporter DinF;protein_id=WP_058646370.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 32126 32335 . + . ID=gene-VMS06_RS20250;Name=VMS06_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20250 NZ_JAVXZI010000021.1 Protein Homology CDS 32126 32335 . + 0 ID=cds-WP_003860314.1;Parent=gene-VMS06_RS20250;Dbxref=GenBank:WP_003860314.1;Name=WP_003860314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224569.1;locus_tag=VMS06_RS20250;product=CsbD family protein;protein_id=WP_003860314.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 32383 32895 . - . ID=gene-VMS06_RS20255;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=VMS06_RS20255 NZ_JAVXZI010000021.1 Protein Homology CDS 32383 32895 . - 0 ID=cds-WP_006810484.1;Parent=gene-VMS06_RS20255;Dbxref=GenBank:WP_006810484.1;Name=WP_006810484.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463106.1;locus_tag=VMS06_RS20255;product=zinc uptake transcriptional repressor Zur;protein_id=WP_006810484.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 33013 33501 . + . ID=gene-VMS06_RS20260;Name=VMS06_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20260 NZ_JAVXZI010000021.1 Protein Homology CDS 33013 33501 . + 0 ID=cds-WP_022646741.1;Parent=gene-VMS06_RS20260;Dbxref=GenBank:WP_022646741.1;Name=WP_022646741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224572.1;locus_tag=VMS06_RS20260;product=cupin domain-containing protein;protein_id=WP_022646741.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 33694 34980 . + . ID=gene-VMS06_RS20265;Name=VMS06_RS20265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20265 NZ_JAVXZI010000021.1 Protein Homology CDS 33694 34980 . + 0 ID=cds-WP_226856390.1;Parent=gene-VMS06_RS20265;Dbxref=GenBank:WP_226856390.1;Name=WP_226856390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463107.1;locus_tag=VMS06_RS20265;product=conjugal transfer protein TraF;protein_id=WP_226856390.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 35063 36058 . + . ID=gene-VMS06_RS20270;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=VMS06_RS20270 NZ_JAVXZI010000021.1 Protein Homology CDS 35063 36058 . + 0 ID=cds-WP_063148449.1;Parent=gene-VMS06_RS20270;Dbxref=GenBank:WP_063148449.1;Name=WP_063148449.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168209.1;locus_tag=VMS06_RS20270;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_063148449.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 36195 36437 . + . ID=gene-VMS06_RS20275;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=VMS06_RS20275 NZ_JAVXZI010000021.1 Protein Homology CDS 36195 36437 . + 0 ID=cds-WP_017382623.1;Parent=gene-VMS06_RS20275;Dbxref=GenBank:WP_017382623.1;Name=WP_017382623.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463109.1;locus_tag=VMS06_RS20275;product=envelope stress response protein PspG;protein_id=WP_017382623.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 36623 37606 . - . ID=gene-VMS06_RS20280;Name=VMS06_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20280 NZ_JAVXZI010000021.1 Protein Homology CDS 36623 37606 . - 0 ID=cds-WP_063148448.1;Parent=gene-VMS06_RS20280;Dbxref=GenBank:WP_063148448.1;Name=WP_063148448.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313060.1;locus_tag=VMS06_RS20280;product=quinone oxidoreductase;protein_id=WP_063148448.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 37673 39085 . + . ID=gene-VMS06_RS20285;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=VMS06_RS20285 NZ_JAVXZI010000021.1 Protein Homology CDS 37673 39085 . + 0 ID=cds-WP_003860298.1;Parent=gene-VMS06_RS20285;Dbxref=GenBank:WP_003860298.1;Name=WP_003860298.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224576.1;locus_tag=VMS06_RS20285;product=replicative DNA helicase;protein_id=WP_003860298.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 39102 40181 . + . ID=gene-VMS06_RS20290;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=VMS06_RS20290 NZ_JAVXZI010000021.1 Protein Homology CDS 39102 40181 . + 0 ID=cds-WP_032627027.1;Parent=gene-VMS06_RS20290;Dbxref=GenBank:WP_032627027.1;Name=WP_032627027.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463112.1;locus_tag=VMS06_RS20290;product=alanine racemase;protein_id=WP_032627027.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 40291 41484 . + . ID=gene-VMS06_RS20295;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=VMS06_RS20295 NZ_JAVXZI010000021.1 Protein Homology CDS 40291 41484 . + 0 ID=cds-WP_063148447.1;Parent=gene-VMS06_RS20295;Dbxref=GenBank:WP_063148447.1;Name=WP_063148447.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313063.1;locus_tag=VMS06_RS20295;product=aromatic amino acid transaminase;protein_id=WP_063148447.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 41743 42456 . + . ID=gene-VMS06_RS20300;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=VMS06_RS20300 NZ_JAVXZI010000021.1 Protein Homology CDS 41743 42456 . + 0 ID=cds-WP_063147065.1;Parent=gene-VMS06_RS20300;Dbxref=GenBank:WP_063147065.1;Name=WP_063147065.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224579.1;locus_tag=VMS06_RS20300;product=acid phosphatase AphA;protein_id=WP_063147065.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 42569 42985 . + . ID=gene-VMS06_RS20305;Name=VMS06_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20305 NZ_JAVXZI010000021.1 Protein Homology CDS 42569 42985 . + 0 ID=cds-WP_023305263.1;Parent=gene-VMS06_RS20305;Dbxref=GenBank:WP_023305263.1;Name=WP_023305263.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224580.1;locus_tag=VMS06_RS20305;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_023305263.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 42988 43341 . + . ID=gene-VMS06_RS20310;Name=VMS06_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20310 NZ_JAVXZI010000021.1 Protein Homology CDS 42988 43341 . + 0 ID=cds-WP_006810472.1;Parent=gene-VMS06_RS20310;Dbxref=GenBank:WP_006810472.1;Name=WP_006810472.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860288.1;locus_tag=VMS06_RS20310;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_006810472.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 43345 46167 . - . ID=gene-VMS06_RS20315;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=VMS06_RS20315 NZ_JAVXZI010000021.1 Protein Homology CDS 43345 46167 . - 0 ID=cds-WP_003860287.1;Parent=gene-VMS06_RS20315;Dbxref=GenBank:WP_003860287.1;Name=WP_003860287.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313067.1;locus_tag=VMS06_RS20315;product=excinuclease ABC subunit UvrA;protein_id=WP_003860287.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 46419 46943 . + . ID=gene-VMS06_RS20320;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=VMS06_RS20320 NZ_JAVXZI010000021.1 Protein Homology CDS 46419 46943 . + 0 ID=cds-WP_003860284.1;Parent=gene-VMS06_RS20320;Dbxref=GenBank:WP_003860284.1;Name=WP_003860284.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224583.1;locus_tag=VMS06_RS20320;product=single-stranded DNA-binding protein SSB1;protein_id=WP_003860284.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 47004 47285 . - . ID=gene-VMS06_RS20325;Name=VMS06_RS20325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20325 NZ_JAVXZI010000021.1 Protein Homology CDS 47004 47285 . - 0 ID=cds-WP_022646751.1;Parent=gene-VMS06_RS20325;Dbxref=GenBank:WP_022646751.1;Name=WP_022646751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224600.1;locus_tag=VMS06_RS20325;product=YjcB family protein;protein_id=WP_022646751.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 47726 49126 . + . ID=gene-VMS06_RS20330;Name=VMS06_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20330 NZ_JAVXZI010000021.1 Protein Homology CDS 47726 49126 . + 0 ID=cds-WP_063148446.1;Parent=gene-VMS06_RS20330;Dbxref=GenBank:WP_063148446.1;Name=WP_063148446.1;Ontology_term=GO:0007165,GO:0005515,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=protein binding|0005515||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694716.1;locus_tag=VMS06_RS20330;product=sensor domain-containing diguanylate cyclase;protein_id=WP_063148446.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 49392 50957 . + . ID=gene-VMS06_RS20335;Name=VMS06_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20335 NZ_JAVXZI010000021.1 Protein Homology CDS 49392 50957 . + 0 ID=cds-WP_038415076.1;Parent=gene-VMS06_RS20335;Dbxref=GenBank:WP_038415076.1;Name=WP_038415076.1;Ontology_term=GO:0007165,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860279.1;locus_tag=VMS06_RS20335;product=EAL domain-containing protein;protein_id=WP_038415076.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 50964 51290 . - . ID=gene-VMS06_RS20340;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=VMS06_RS20340 NZ_JAVXZI010000021.1 Protein Homology CDS 50964 51290 . - 0 ID=cds-WP_003860277.1;Parent=gene-VMS06_RS20340;Dbxref=GenBank:WP_003860277.1;Name=WP_003860277.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095071.1;locus_tag=VMS06_RS20340;product=superoxide response transcriptional regulator SoxS;protein_id=WP_003860277.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 51389 51847 . + . ID=gene-VMS06_RS20345;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=VMS06_RS20345 NZ_JAVXZI010000021.1 Protein Homology CDS 51389 51847 . + 0 ID=cds-WP_003860275.1;Parent=gene-VMS06_RS20345;Dbxref=GenBank:WP_003860275.1;Name=WP_003860275.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463131.1;locus_tag=VMS06_RS20345;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_003860275.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 52201 52872 . + . ID=gene-VMS06_RS20350;Name=VMS06_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20350 NZ_JAVXZI010000021.1 Protein Homology CDS 52201 52872 . + 0 ID=cds-WP_063148445.1;Parent=gene-VMS06_RS20350;Dbxref=GenBank:WP_063148445.1;Name=WP_063148445.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810467.1;locus_tag=VMS06_RS20350;product=glutathione S-transferase family protein;protein_id=WP_063148445.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 53170 54519 . + . ID=gene-VMS06_RS20355;Name=ghxP;gbkey=Gene;gene=ghxP;gene_biotype=protein_coding;gene_synonym=yjcD;locus_tag=VMS06_RS20355 NZ_JAVXZI010000021.1 Protein Homology CDS 53170 54519 . + 0 ID=cds-WP_063148444.1;Parent=gene-VMS06_RS20355;Dbxref=GenBank:WP_063148444.1;Name=WP_063148444.1;gbkey=CDS;gene=ghxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=VMS06_RS20355;product=guanine/hypoxanthine transporter GhxP;protein_id=WP_063148444.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 54673 56319 . + . ID=gene-VMS06_RS20360;Name=VMS06_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20360 NZ_JAVXZI010000021.1 Protein Homology CDS 54673 56319 . + 0 ID=cds-WP_022646758.1;Parent=gene-VMS06_RS20360;Dbxref=GenBank:WP_022646758.1;Name=WP_022646758.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463134.1;locus_tag=VMS06_RS20360;product=Na+/H+ antiporter;protein_id=WP_022646758.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 56833 57720 . - . ID=gene-VMS06_RS20365;Name=VMS06_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20365 NZ_JAVXZI010000021.1 Protein Homology CDS 56833 57720 . - 0 ID=cds-WP_022646759.1;Parent=gene-VMS06_RS20365;Dbxref=GenBank:WP_022646759.1;Name=WP_022646759.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694714.1;locus_tag=VMS06_RS20365;product=LysR family transcriptional regulator;protein_id=WP_022646759.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 57823 58233 . + . ID=gene-VMS06_RS20370;Name=VMS06_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20370 NZ_JAVXZI010000021.1 Protein Homology CDS 57823 58233 . + 0 ID=cds-WP_022646760.1;Parent=gene-VMS06_RS20370;Dbxref=GenBank:WP_022646760.1;Name=WP_022646760.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860266.1;locus_tag=VMS06_RS20370;product=CidA/LrgA family protein;protein_id=WP_022646760.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 58226 58915 . + . ID=gene-VMS06_RS20375;Name=VMS06_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20375 NZ_JAVXZI010000021.1 Protein Homology CDS 58226 58915 . + 0 ID=cds-WP_022646761.1;Parent=gene-VMS06_RS20375;Dbxref=GenBank:WP_022646761.1;Name=WP_022646761.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463137.1;locus_tag=VMS06_RS20375;product=LrgB family protein;protein_id=WP_022646761.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 58949 60598 . - . ID=gene-VMS06_RS20380;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=VMS06_RS20380 NZ_JAVXZI010000021.1 Protein Homology CDS 58949 60598 . - 0 ID=cds-WP_023299099.1;Parent=gene-VMS06_RS20380;Dbxref=GenBank:WP_023299099.1;Name=WP_023299099.1;Ontology_term=GO:0006814,GO:0015123,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=acetate transmembrane transporter activity|0015123||IEA,solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=VMS06_RS20380;product=cation/acetate symporter ActP;protein_id=WP_023299099.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 60595 60909 . - . ID=gene-VMS06_RS20385;Name=VMS06_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20385 NZ_JAVXZI010000021.1 Protein Homology CDS 60595 60909 . - 0 ID=cds-WP_038415083.1;Parent=gene-VMS06_RS20385;Dbxref=GenBank:WP_038415083.1;Name=WP_038415083.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177369.1;locus_tag=VMS06_RS20385;product=DUF485 domain-containing protein;protein_id=WP_038415083.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 61043 63001 . - . ID=gene-VMS06_RS20390;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=VMS06_RS20390 NZ_JAVXZI010000021.1 Protein Homology CDS 61043 63001 . - 0 ID=cds-WP_023299100.1;Parent=gene-VMS06_RS20390;Dbxref=GenBank:WP_023299100.1;Name=WP_023299100.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418493.1;locus_tag=VMS06_RS20390;product=acetate--CoA ligase;protein_id=WP_023299100.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 63425 64738 . + . ID=gene-VMS06_RS20395;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=VMS06_RS20395 NZ_JAVXZI010000021.1 Protein Homology CDS 63425 64738 . + 0 ID=cds-WP_022646765.1;Parent=gene-VMS06_RS20395;Dbxref=GenBank:WP_022646765.1;Name=WP_022646765.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155378.1;locus_tag=VMS06_RS20395;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_022646765.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 64822 65496 . - . ID=gene-VMS06_RS20400;Name=VMS06_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20400 NZ_JAVXZI010000021.1 Protein Homology CDS 64822 65496 . - 0 ID=cds-WP_038415085.1;Parent=gene-VMS06_RS20400;Dbxref=GenBank:WP_038415085.1;Name=WP_038415085.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830306.1;locus_tag=VMS06_RS20400;product=tetratricopeptide repeat protein;protein_id=WP_038415085.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 65618 65770 . - . ID=gene-VMS06_RS20405;Name=VMS06_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20405 NZ_JAVXZI010000021.1 Protein Homology CDS 65618 65770 . - 0 ID=cds-WP_023299102.1;Parent=gene-VMS06_RS20405;Dbxref=GenBank:WP_023299102.1;Name=WP_023299102.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382637.1;locus_tag=VMS06_RS20405;product=Hok/Gef family protein;protein_id=WP_023299102.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 66090 68237 . - . ID=gene-VMS06_RS20410;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=VMS06_RS20410 NZ_JAVXZI010000021.1 Protein Homology CDS 66090 68237 . - 0 ID=cds-WP_080298763.1;Parent=gene-VMS06_RS20410;Dbxref=GenBank:WP_080298763.1;Name=WP_080298763.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=VMS06_RS20410;product=formate dehydrogenase subunit alpha;protein_id=WP_080298763.1;transl_except=(pos:complement(67818..67820)%2Caa:Sec);transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 68494 69225 . + . ID=gene-VMS06_RS20415;Name=VMS06_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20415 NZ_JAVXZI010000021.1 Protein Homology CDS 68494 69225 . + 0 ID=cds-WP_022646769.1;Parent=gene-VMS06_RS20415;Dbxref=GenBank:WP_022646769.1;Name=WP_022646769.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132562.1;locus_tag=VMS06_RS20415;product=response regulator;protein_id=WP_022646769.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 69207 70223 . - . ID=gene-VMS06_RS20420;Name=VMS06_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20420 NZ_JAVXZI010000021.1 Protein Homology CDS 69207 70223 . - 0 ID=cds-WP_063843942.1;Parent=gene-VMS06_RS20420;Dbxref=GenBank:WP_063843942.1;Name=WP_063843942.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0016301,GO:0016773,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694711.1;locus_tag=VMS06_RS20420;product=carbohydrate kinase family protein;protein_id=WP_063843942.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 70223 71083 . - . ID=gene-VMS06_RS20425;Name=VMS06_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20425 NZ_JAVXZI010000021.1 Protein Homology CDS 70223 71083 . - 0 ID=cds-WP_323630706.1;Parent=gene-VMS06_RS20425;Dbxref=GenBank:WP_323630706.1;Name=WP_323630706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313096.1;locus_tag=VMS06_RS20425;product=ketose 1%2C6-bisphosphate aldolase;protein_id=WP_323630706.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 71094 71780 . - . ID=gene-VMS06_RS20430;Name=VMS06_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20430 NZ_JAVXZI010000021.1 Protein Homology CDS 71094 71780 . - 0 ID=cds-WP_045309106.1;Parent=gene-VMS06_RS20430;Dbxref=GenBank:WP_045309106.1;Name=WP_045309106.1;Ontology_term=GO:0043709,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=cell adhesion involved in single-species biofilm formation|0043709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013095092.1;locus_tag=VMS06_RS20430;product=D-lyxose/D-mannose isomerase;protein_id=WP_045309106.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 71888 72829 . - . ID=gene-VMS06_RS20435;Name=VMS06_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20435 NZ_JAVXZI010000021.1 Protein Homology CDS 71888 72829 . - 0 ID=cds-WP_003860240.1;Parent=gene-VMS06_RS20435;Dbxref=GenBank:WP_003860240.1;Name=WP_003860240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313098.1;locus_tag=VMS06_RS20435;product=ABC transporter substrate-binding protein;protein_id=WP_003860240.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 72858 73853 . - . ID=gene-VMS06_RS20440;Name=VMS06_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20440 NZ_JAVXZI010000021.1 Protein Homology CDS 72858 73853 . - 0 ID=cds-WP_003860239.1;Parent=gene-VMS06_RS20440;Dbxref=GenBank:WP_003860239.1;Name=WP_003860239.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860239.1;locus_tag=VMS06_RS20440;product=ABC transporter permease subunit;protein_id=WP_003860239.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 73856 75370 . - . ID=gene-VMS06_RS20445;Name=VMS06_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20445 NZ_JAVXZI010000021.1 Protein Homology CDS 73856 75370 . - 0 ID=cds-WP_323630705.1;Parent=gene-VMS06_RS20445;Dbxref=GenBank:WP_323630705.1;Name=WP_323630705.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014068550.1;locus_tag=VMS06_RS20445;product=sugar ABC transporter ATP-binding protein;protein_id=WP_323630705.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 75552 77831 . + . ID=gene-VMS06_RS20450;Name=VMS06_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20450 NZ_JAVXZI010000021.1 Protein Homology CDS 75552 77831 . + 0 ID=cds-WP_063148472.1;Parent=gene-VMS06_RS20450;Dbxref=GenBank:WP_063148472.1;Name=WP_063148472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860237.1;locus_tag=VMS06_RS20450;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_063148472.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 77901 78224 . + . ID=gene-VMS06_RS20455;Name=yjdP;gbkey=Gene;gene=yjdP;gene_biotype=protein_coding;locus_tag=VMS06_RS20455 NZ_JAVXZI010000021.1 Protein Homology CDS 77901 78224 . + 0 ID=cds-WP_017382647.1;Parent=gene-VMS06_RS20455;Dbxref=GenBank:WP_017382647.1;Name=WP_017382647.1;gbkey=CDS;gene=yjdP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694705.1;locus_tag=VMS06_RS20455;product=DDRRRQL repeat protein YjdP;protein_id=WP_017382647.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 78280 79038 . - . ID=gene-VMS06_RS20460;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=VMS06_RS20460 NZ_JAVXZI010000021.1 Protein Homology CDS 78280 79038 . - 0 ID=cds-WP_063148473.1;Parent=gene-VMS06_RS20460;Dbxref=GenBank:WP_063148473.1;Name=WP_063148473.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000059797.1;locus_tag=VMS06_RS20460;product=phosphonate metabolism protein PhnP;protein_id=WP_063148473.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 79048 79482 . - . ID=gene-VMS06_RS20465;Name=phnO;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=VMS06_RS20465 NZ_JAVXZI010000021.1 Protein Homology CDS 79048 79482 . - 0 ID=cds-WP_063148474.1;Parent=gene-VMS06_RS20465;Dbxref=GenBank:WP_063148474.1;Name=WP_063148474.1;gbkey=CDS;gene=phnO;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418517.1;locus_tag=VMS06_RS20465;product=aminoalkylphosphonate N-acetyltransferase;protein_id=WP_063148474.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 79475 80026 . - . ID=gene-VMS06_RS20470;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=VMS06_RS20470 NZ_JAVXZI010000021.1 Protein Homology CDS 79475 80026 . - 0 ID=cds-WP_032621424.1;Parent=gene-VMS06_RS20470;Dbxref=GenBank:WP_032621424.1;Name=WP_032621424.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418518.1;locus_tag=VMS06_RS20470;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_032621424.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 80023 81159 . - . ID=gene-VMS06_RS20475;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=VMS06_RS20475 NZ_JAVXZI010000021.1 Protein Homology CDS 80023 81159 . - 0 ID=cds-WP_063148475.1;Parent=gene-VMS06_RS20475;Dbxref=GenBank:WP_063148475.1;Name=WP_063148475.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313105.1;locus_tag=VMS06_RS20475;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_063148475.1;transl_table=11 NZ_JAVXZI010000021.1 RefSeq gene 81156 81836 . - . ID=gene-VMS06_RS20480;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=VMS06_RS20480 NZ_JAVXZI010000021.1 Protein Homology CDS 81156 81836 . - 0 ID=cds-WP_022646780.1;Parent=gene-VMS06_RS20480;Dbxref=GenBank:WP_022646780.1;Name=WP_022646780.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882179.1;locus_tag=VMS06_RS20480;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_022646780.1;transl_table=11 ##sequence-region NZ_JAVXZI010000022.1 1 74530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000022.1 RefSeq region 1 74530 . + . ID=NZ_JAVXZI010000022.1:1..74530;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000022.1 RefSeq gene 27 103 . + . ID=gene-VMS06_RS20485;Name=VMS06_RS20485;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS20485 NZ_JAVXZI010000022.1 tRNAscan-SE tRNA 27 103 . + . ID=rna-VMS06_RS20485;Parent=gene-VMS06_RS20485;anticodon=(pos:61..63);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS20485;product=tRNA-Asp NZ_JAVXZI010000022.1 tRNAscan-SE exon 27 103 . + . ID=exon-VMS06_RS20485-1;Parent=rna-VMS06_RS20485;anticodon=(pos:61..63);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS20485;product=tRNA-Asp NZ_JAVXZI010000022.1 RefSeq gene 157 232 . + . ID=gene-VMS06_RS20490;Name=VMS06_RS20490;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS20490 NZ_JAVXZI010000022.1 tRNAscan-SE tRNA 157 232 . + . ID=rna-VMS06_RS20490;Parent=gene-VMS06_RS20490;anticodon=(pos:190..192);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS20490;product=tRNA-Trp NZ_JAVXZI010000022.1 tRNAscan-SE exon 157 232 . + . ID=exon-VMS06_RS20490-1;Parent=rna-VMS06_RS20490;anticodon=(pos:190..192);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS20490;product=tRNA-Trp NZ_JAVXZI010000022.1 RefSeq gene 333 1154 . - . ID=gene-VMS06_RS20495;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=VMS06_RS20495 NZ_JAVXZI010000022.1 Protein Homology CDS 333 1154 . - 0 ID=cds-WP_022649779.1;Parent=gene-VMS06_RS20495;Dbxref=GenBank:WP_022649779.1;Name=WP_022649779.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693775.1;locus_tag=VMS06_RS20495;product=HTH-type transcriptional regulator HdfR;protein_id=WP_022649779.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 1273 1611 . + . ID=gene-VMS06_RS20500;Name=VMS06_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20500 NZ_JAVXZI010000022.1 Protein Homology CDS 1273 1611 . + 0 ID=cds-WP_006808641.1;Parent=gene-VMS06_RS20500;Dbxref=GenBank:WP_006808641.1;Name=WP_006808641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224411.1;locus_tag=VMS06_RS20500;product=MaoP family protein;protein_id=WP_006808641.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 1638 3158 . - . ID=gene-VMS06_RS20505;Name=VMS06_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20505 NZ_JAVXZI010000022.1 Protein Homology CDS 1638 3158 . - 0 ID=cds-WP_063148419.1;Parent=gene-VMS06_RS20505;Dbxref=GenBank:WP_063148419.1;Name=WP_063148419.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462790.1;locus_tag=VMS06_RS20505;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_063148419.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 3499 3597 . + . ID=gene-VMS06_RS20510;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=VMS06_RS20510 NZ_JAVXZI010000022.1 Protein Homology CDS 3499 3597 . + 0 ID=cds-WP_001311244.1;Parent=gene-VMS06_RS20510;Dbxref=GenBank:WP_001311244.1;Name=WP_001311244.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=VMS06_RS20510;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 3684 3734 . + . ID=gene-VMS06_RS20515;Name=ilvX;gbkey=Gene;gene=ilvX;gene_biotype=protein_coding;locus_tag=VMS06_RS20515 NZ_JAVXZI010000022.1 Protein Homology CDS 3684 3734 . + 0 ID=cds-WP_166792073.1;Parent=gene-VMS06_RS20515;Dbxref=GenBank:WP_166792073.1;Name=WP_166792073.1;gbkey=CDS;gene=ilvX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791259.1;locus_tag=VMS06_RS20515;product=peptide IlvX;protein_id=WP_166792073.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 3737 5383 . + . ID=gene-VMS06_RS20520;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=VMS06_RS20520 NZ_JAVXZI010000022.1 Protein Homology CDS 3737 5383 . + 0 ID=cds-WP_063843938.1;Parent=gene-VMS06_RS20520;Dbxref=GenBank:WP_063843938.1;Name=WP_063843938.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=VMS06_RS20520;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_063843938.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 5380 5643 . + . ID=gene-VMS06_RS20525;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=VMS06_RS20525 NZ_JAVXZI010000022.1 Protein Homology CDS 5380 5643 . + 0 ID=cds-WP_003860184.1;Parent=gene-VMS06_RS20525;Dbxref=GenBank:WP_003860184.1;Name=WP_003860184.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312730.1;locus_tag=VMS06_RS20525;product=acetolactate synthase 2 small subunit;protein_id=WP_003860184.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 5662 6591 . + . ID=gene-VMS06_RS20530;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=VMS06_RS20530 NZ_JAVXZI010000022.1 Protein Homology CDS 5662 6591 . + 0 ID=cds-WP_003860182.1;Parent=gene-VMS06_RS20530;Dbxref=GenBank:WP_003860182.1;Name=WP_003860182.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860182.1;locus_tag=VMS06_RS20530;product=branched-chain-amino-acid transaminase;protein_id=WP_003860182.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 6652 8502 . + . ID=gene-VMS06_RS20535;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=VMS06_RS20535 NZ_JAVXZI010000022.1 Protein Homology CDS 6652 8502 . + 0 ID=cds-WP_022649775.1;Parent=gene-VMS06_RS20535;Dbxref=GenBank:WP_022649775.1;Name=WP_022649775.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=VMS06_RS20535;product=dihydroxy-acid dehydratase;protein_id=WP_022649775.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 8505 10049 . + . ID=gene-VMS06_RS20540;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=VMS06_RS20540 NZ_JAVXZI010000022.1 Protein Homology CDS 8505 10049 . + 0 ID=cds-WP_100148853.1;Parent=gene-VMS06_RS20540;Dbxref=GenBank:WP_100148853.1;Name=WP_100148853.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312733.1;locus_tag=VMS06_RS20540;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_100148853.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 10095 10985 . - . ID=gene-VMS06_RS20545;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=VMS06_RS20545 NZ_JAVXZI010000022.1 Protein Homology CDS 10095 10985 . - 0 ID=cds-WP_017693777.1;Parent=gene-VMS06_RS20545;Dbxref=GenBank:WP_017693777.1;Name=WP_017693777.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000365756.1;locus_tag=VMS06_RS20545;product=HTH-type transcriptional activator IlvY;protein_id=WP_017693777.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 11138 12613 . + . ID=gene-VMS06_RS20550;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=VMS06_RS20550 NZ_JAVXZI010000022.1 Protein Homology CDS 11138 12613 . + 0 ID=cds-WP_022649773.1;Parent=gene-VMS06_RS20550;Dbxref=GenBank:WP_022649773.1;Name=WP_022649773.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=VMS06_RS20550;product=ketol-acid reductoisomerase;protein_id=WP_022649773.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 12650 13123 . - . ID=gene-VMS06_RS20555;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=VMS06_RS20555 NZ_JAVXZI010000022.1 Protein Homology CDS 12650 13123 . - 0 ID=cds-WP_022649772.1;Parent=gene-VMS06_RS20555;Dbxref=GenBank:WP_022649772.1;Name=WP_022649772.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=VMS06_RS20555;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_022649772.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 13170 14510 . - . ID=gene-VMS06_RS20560;Name=VMS06_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20560 NZ_JAVXZI010000022.1 Protein Homology CDS 13170 14510 . - 0 ID=cds-WP_022649771.1;Parent=gene-VMS06_RS20560;Dbxref=GenBank:WP_022649771.1;Name=WP_022649771.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382575.1;locus_tag=VMS06_RS20560;product=MFS transporter;protein_id=WP_022649771.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 14690 15877 . - . ID=gene-VMS06_RS20565;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=VMS06_RS20565 NZ_JAVXZI010000022.1 Protein Homology CDS 14690 15877 . - 0 ID=cds-WP_063148422.1;Parent=gene-VMS06_RS20565;Dbxref=GenBank:WP_063148422.1;Name=WP_063148422.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462594.1;locus_tag=VMS06_RS20565;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_063148422.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 15874 16647 . - . ID=gene-VMS06_RS20570;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=VMS06_RS20570 NZ_JAVXZI010000022.1 Protein Homology CDS 15874 16647 . - 0 ID=cds-WP_023298877.1;Parent=gene-VMS06_RS20570;Dbxref=GenBank:WP_023298877.1;Name=WP_023298877.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808630.1;locus_tag=VMS06_RS20570;product=transcriptional regulator LldR;protein_id=WP_023298877.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 16644 18299 . - . ID=gene-VMS06_RS20575;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=VMS06_RS20575 NZ_JAVXZI010000022.1 Protein Homology CDS 16644 18299 . - 0 ID=cds-WP_323630707.1;Parent=gene-VMS06_RS20575;Dbxref=GenBank:WP_323630707.1;Name=WP_323630707.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462592.1;locus_tag=VMS06_RS20575;product=L-lactate permease;protein_id=WP_323630707.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 19398 19979 . + . ID=gene-VMS06_RS20580;Name=VMS06_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20580 NZ_JAVXZI010000022.1 Protein Homology CDS 19398 19979 . + 0 ID=cds-WP_032621994.1;Parent=gene-VMS06_RS20580;Dbxref=GenBank:WP_032621994.1;Name=WP_032621994.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860173.1;locus_tag=VMS06_RS20580;product=fimbrial protein;protein_id=WP_032621994.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 20010 20684 . + . ID=gene-VMS06_RS20585;Name=VMS06_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20585 NZ_JAVXZI010000022.1 Protein Homology CDS 20010 20684 . + 0 ID=cds-WP_022649767.1;Parent=gene-VMS06_RS20585;Dbxref=GenBank:WP_022649767.1;Name=WP_022649767.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693782.1;locus_tag=VMS06_RS20585;product=fimbrial biogenesis chaperone;protein_id=WP_022649767.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 20689 23169 . + . ID=gene-VMS06_RS20590;Name=VMS06_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20590 NZ_JAVXZI010000022.1 Protein Homology CDS 20689 23169 . + 0 ID=cds-WP_063843936.1;Parent=gene-VMS06_RS20590;Dbxref=GenBank:WP_063843936.1;Name=WP_063843936.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382579.1;locus_tag=VMS06_RS20590;product=fimbria/pilus outer membrane usher protein;protein_id=WP_063843936.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 23179 24273 . + . ID=gene-VMS06_RS20595;Name=VMS06_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20595 NZ_JAVXZI010000022.1 Protein Homology CDS 23179 24273 . + 0 ID=cds-WP_063148424.1;Parent=gene-VMS06_RS20595;Dbxref=GenBank:WP_063148424.1;Name=WP_063148424.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693785.1;locus_tag=VMS06_RS20595;product=fimbrial protein;protein_id=WP_063148424.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 24307 24669 . - . ID=gene-VMS06_RS20600;Name=VMS06_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20600 NZ_JAVXZI010000022.1 Protein Homology CDS 24307 24669 . - 0 ID=cds-WP_022649764.1;Parent=gene-VMS06_RS20600;Dbxref=GenBank:WP_022649764.1;Name=WP_022649764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312505.1;locus_tag=VMS06_RS20600;product=YibL family ribosome-associated protein;protein_id=WP_022649764.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 24728 25318 . - . ID=gene-VMS06_RS20605;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=VMS06_RS20605 NZ_JAVXZI010000022.1 Protein Homology CDS 24728 25318 . - 0 ID=cds-WP_063148425.1;Parent=gene-VMS06_RS20605;Dbxref=GenBank:WP_063148425.1;Name=WP_063148425.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462587.1;locus_tag=VMS06_RS20605;product=mannitol operon repressor MtlR;protein_id=WP_063148425.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 25315 26463 . - . ID=gene-VMS06_RS20610;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=VMS06_RS20610 NZ_JAVXZI010000022.1 Protein Homology CDS 25315 26463 . - 0 ID=cds-WP_022649762.1;Parent=gene-VMS06_RS20610;Dbxref=GenBank:WP_022649762.1;Name=WP_022649762.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462586.1;locus_tag=VMS06_RS20610;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_022649762.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 26566 28473 . - . ID=gene-VMS06_RS20615;Name=VMS06_RS20615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20615 NZ_JAVXZI010000022.1 Protein Homology CDS 26566 28473 . - 0 ID=cds-WP_063148426.1;Parent=gene-VMS06_RS20615;Dbxref=GenBank:WP_063148426.1;Name=WP_063148426.1;Ontology_term=GO:0009401,GO:0015797,GO:0016310,GO:0016301,GO:0022872,GO:0090565,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity|0022872||IEA,protein-phosphocysteine-mannitol phosphotransferase system transporter activity|0090565||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,mannitol transmembrane transport|0015797||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229402.1;locus_tag=VMS06_RS20615;product=PTS mannitol transporter subunit IICBA;protein_id=WP_063148426.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 28910 29518 . + . ID=gene-VMS06_RS20620;Name=VMS06_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20620 NZ_JAVXZI010000022.1 Protein Homology CDS 28910 29518 . + 0 ID=cds-WP_063148427.1;Parent=gene-VMS06_RS20620;Dbxref=GenBank:WP_063148427.1;Name=WP_063148427.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462584.1;locus_tag=VMS06_RS20620;product=glutathione S-transferase;protein_id=WP_063148427.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 29622 31007 . + . ID=gene-VMS06_RS20625;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=VMS06_RS20625 NZ_JAVXZI010000022.1 Protein Homology CDS 29622 31007 . + 0 ID=cds-WP_063843935.1;Parent=gene-VMS06_RS20625;Dbxref=GenBank:WP_063843935.1;Name=WP_063843935.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312495.1;locus_tag=VMS06_RS20625;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_063843935.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 31004 32842 . + . ID=gene-VMS06_RS20630;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=VMS06_RS20630 NZ_JAVXZI010000022.1 Protein Homology CDS 31004 32842 . + 0 ID=cds-WP_063148429.1;Parent=gene-VMS06_RS20630;Dbxref=GenBank:WP_063148429.1;Name=WP_063148429.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436698.1;locus_tag=VMS06_RS20630;product=selenocysteine-specific translation elongation factor;protein_id=WP_063148429.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 32846 33730 . - . ID=gene-VMS06_RS20635;Name=VMS06_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20635 NZ_JAVXZI010000022.1 Protein Homology CDS 32846 33730 . - 0 ID=cds-WP_023298868.1;Parent=gene-VMS06_RS20635;Dbxref=GenBank:WP_023298868.1;Name=WP_023298868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382584.1;locus_tag=VMS06_RS20635;product=ROK family protein;protein_id=WP_023298868.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 33897 35435 . + . ID=gene-VMS06_RS20640;Name=aldB;gbkey=Gene;gene=aldB;gene_biotype=protein_coding;locus_tag=VMS06_RS20640 NZ_JAVXZI010000022.1 Protein Homology CDS 33897 35435 . + 0 ID=cds-WP_063148430.1;Parent=gene-VMS06_RS20640;Dbxref=GenBank:WP_063148430.1;Name=WP_063148430.1;gbkey=CDS;gene=aldB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462580.1;locus_tag=VMS06_RS20640;product=aldehyde dehydrogenase AldB;protein_id=WP_063148430.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 35568 37517 . - . ID=gene-VMS06_RS20645;Name=VMS06_RS20645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20645 NZ_JAVXZI010000022.1 Protein Homology CDS 35568 37517 . - 0 ID=cds-WP_063148431.1;Parent=gene-VMS06_RS20645;Dbxref=GenBank:WP_063148431.1;Name=WP_063148431.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882027.1;locus_tag=VMS06_RS20645;product=glycoside hydrolase family 127 protein;protein_id=WP_063148431.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 37528 38928 . - . ID=gene-VMS06_RS20650;Name=VMS06_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20650 NZ_JAVXZI010000022.1 Protein Homology CDS 37528 38928 . - 0 ID=cds-WP_022649754.1;Parent=gene-VMS06_RS20650;Dbxref=GenBank:WP_022649754.1;Name=WP_022649754.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868866.1;locus_tag=VMS06_RS20650;product=MFS transporter;protein_id=WP_022649754.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 39154 39972 . + . ID=gene-VMS06_RS20655;Name=VMS06_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20655 NZ_JAVXZI010000022.1 Protein Homology CDS 39154 39972 . + 0 ID=cds-WP_022649753.1;Parent=gene-VMS06_RS20655;Dbxref=GenBank:WP_022649753.1;Name=WP_022649753.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006808609.1;locus_tag=VMS06_RS20655;product=AraC family transcriptional regulator;protein_id=WP_022649753.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 39973 40668 . - . ID=gene-VMS06_RS20660;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=VMS06_RS20660 NZ_JAVXZI010000022.1 Protein Homology CDS 39973 40668 . - 0 ID=cds-WP_023298864.1;Parent=gene-VMS06_RS20660;Dbxref=GenBank:WP_023298864.1;Name=WP_023298864.1;Ontology_term=GO:0019568,GO:0008270,GO:0008742;gbkey=CDS;gene=araD;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418040.1;locus_tag=VMS06_RS20660;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_023298864.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 40662 41522 . - . ID=gene-VMS06_RS20665;Name=VMS06_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20665 NZ_JAVXZI010000022.1 Protein Homology CDS 40662 41522 . - 0 ID=cds-WP_063148432.1;Parent=gene-VMS06_RS20665;Dbxref=GenBank:WP_063148432.1;Name=WP_063148432.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462576.1;locus_tag=VMS06_RS20665;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_063148432.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 41525 42178 . - . ID=gene-VMS06_RS20670;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=VMS06_RS20670 NZ_JAVXZI010000022.1 Protein Homology CDS 41525 42178 . - 0 ID=cds-WP_023298862.1;Parent=gene-VMS06_RS20670;Dbxref=GenBank:WP_023298862.1;Name=WP_023298862.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014068400.1;locus_tag=VMS06_RS20670;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_023298862.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 42175 43680 . - . ID=gene-VMS06_RS20675;Name=VMS06_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20675 NZ_JAVXZI010000022.1 Protein Homology CDS 42175 43680 . - 0 ID=cds-WP_038416907.1;Parent=gene-VMS06_RS20675;Dbxref=GenBank:WP_038416907.1;Name=WP_038416907.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882657.1;locus_tag=VMS06_RS20675;product=FGGY-family carbohydrate kinase;protein_id=WP_038416907.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 43757 45076 . - . ID=gene-VMS06_RS20680;Name=VMS06_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20680 NZ_JAVXZI010000022.1 Protein Homology CDS 43757 45076 . - 0 ID=cds-WP_038416906.1;Parent=gene-VMS06_RS20680;Dbxref=GenBank:WP_038416906.1;Name=WP_038416906.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094951.1;locus_tag=VMS06_RS20680;product=MFS transporter;protein_id=WP_038416906.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 45122 46048 . - . ID=gene-VMS06_RS20685;Name=VMS06_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20685 NZ_JAVXZI010000022.1 Protein Homology CDS 45122 46048 . - 0 ID=cds-WP_023298859.1;Parent=gene-VMS06_RS20685;Dbxref=GenBank:WP_023298859.1;Name=WP_023298859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436725.1;locus_tag=VMS06_RS20685;product=DUF4862 family protein;protein_id=WP_023298859.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 46075 46542 . - . ID=gene-VMS06_RS20690;Name=VMS06_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20690 NZ_JAVXZI010000022.1 Protein Homology CDS 46075 46542 . - 0 ID=cds-WP_038416904.1;Parent=gene-VMS06_RS20690;Dbxref=GenBank:WP_038416904.1;Name=WP_038416904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000576051.1;locus_tag=VMS06_RS20690;product=YhcH/YjgK/YiaL family protein;protein_id=WP_038416904.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 46553 47551 . - . ID=gene-VMS06_RS20695;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=VMS06_RS20695 NZ_JAVXZI010000022.1 Protein Homology CDS 46553 47551 . - 0 ID=cds-WP_038416903.1;Parent=gene-VMS06_RS20695;Dbxref=GenBank:WP_038416903.1;Name=WP_038416903.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709360.1;locus_tag=VMS06_RS20695;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_038416903.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 47776 48594 . + . ID=gene-VMS06_RS20700;Name=yiaJ;gbkey=Gene;gene=yiaJ;gene_biotype=protein_coding;locus_tag=VMS06_RS20700 NZ_JAVXZI010000022.1 Protein Homology CDS 47776 48594 . + 0 ID=cds-WP_015572751.1;Parent=gene-VMS06_RS20700;Dbxref=GenBank:WP_015572751.1;Name=WP_015572751.1;gbkey=CDS;gene=yiaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572751.1;locus_tag=VMS06_RS20700;product=IclR family transcriptional regulator YiaJ;protein_id=WP_015572751.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 48598 49053 . + . ID=gene-VMS06_RS20705;Name=VMS06_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20705 NZ_JAVXZI010000022.1 Protein Homology CDS 48598 49053 . + 0 ID=cds-WP_038416902.1;Parent=gene-VMS06_RS20705;Dbxref=GenBank:WP_038416902.1;Name=WP_038416902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017382594.1;locus_tag=VMS06_RS20705;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_038416902.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 49061 50314 . - . ID=gene-VMS06_RS20710;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=VMS06_RS20710 NZ_JAVXZI010000022.1 Protein Homology CDS 49061 50314 . - 0 ID=cds-WP_022649751.1;Parent=gene-VMS06_RS20710;Dbxref=GenBank:WP_022649751.1;Name=WP_022649751.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572749.1;locus_tag=VMS06_RS20710;product=valine--pyruvate transaminase;protein_id=WP_022649751.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 50555 52585 . - . ID=gene-VMS06_RS20715;Name=VMS06_RS20715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20715 NZ_JAVXZI010000022.1 Protein Homology CDS 50555 52585 . - 0 ID=cds-WP_058677325.1;Parent=gene-VMS06_RS20715;Dbxref=GenBank:WP_058677325.1;Name=WP_058677325.1;Ontology_term=GO:0004556;gbkey=CDS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882651.1;locus_tag=VMS06_RS20715;product=alpha-amylase;protein_id=WP_058677325.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 52899 53723 . + . ID=gene-VMS06_RS20720;Name=VMS06_RS20720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20720 NZ_JAVXZI010000022.1 Protein Homology CDS 52899 53723 . + 0 ID=cds-WP_022649749.1;Parent=gene-VMS06_RS20720;Dbxref=GenBank:WP_022649749.1;Name=WP_022649749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462563.1;locus_tag=VMS06_RS20720;product=protein bax;protein_id=WP_022649749.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 53759 54937 . - . ID=gene-VMS06_RS20725;Name=xylR;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=VMS06_RS20725 NZ_JAVXZI010000022.1 Protein Homology CDS 53759 54937 . - 0 ID=cds-WP_038416899.1;Parent=gene-VMS06_RS20725;Dbxref=GenBank:WP_038416899.1;Name=WP_038416899.1;Note=D-xylose enhances binding of XylR to the xyl promoter and activates transcription.;gbkey=CDS;gene=xylR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494484.1;locus_tag=VMS06_RS20725;product=D-xylose utilization transcriptional activator XylR;protein_id=WP_038416899.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 54972 56153 . - . ID=gene-VMS06_RS20730;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=VMS06_RS20730 NZ_JAVXZI010000022.1 Protein Homology CDS 54972 56153 . - 0 ID=cds-WP_063148433.1;Parent=gene-VMS06_RS20730;Dbxref=GenBank:WP_063148433.1;Name=WP_063148433.1;gbkey=CDS;gene=xylH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312478.1;locus_tag=VMS06_RS20730;product=xylose ABC transporter permease XylH;protein_id=WP_063148433.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 56131 57672 . - . ID=gene-VMS06_RS20735;Name=VMS06_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20735 NZ_JAVXZI010000022.1 Protein Homology CDS 56131 57672 . - 0 ID=cds-WP_015572746.1;Parent=gene-VMS06_RS20735;Dbxref=GenBank:WP_015572746.1;Name=WP_015572746.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229390.1;locus_tag=VMS06_RS20735;product=xylose ABC transporter ATP-binding protein;protein_id=WP_015572746.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 57745 58737 . - . ID=gene-VMS06_RS20740;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=VMS06_RS20740 NZ_JAVXZI010000022.1 Protein Homology CDS 57745 58737 . - 0 ID=cds-WP_063148434.1;Parent=gene-VMS06_RS20740;Dbxref=GenBank:WP_063148434.1;Name=WP_063148434.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418023.1;locus_tag=VMS06_RS20740;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_063148434.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 59109 60431 . + . ID=gene-VMS06_RS20745;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=VMS06_RS20745 NZ_JAVXZI010000022.1 Protein Homology CDS 59109 60431 . + 0 ID=cds-WP_026080557.1;Parent=gene-VMS06_RS20745;Dbxref=GenBank:WP_026080557.1;Name=WP_026080557.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462561.1;locus_tag=VMS06_RS20745;product=xylose isomerase;protein_id=WP_026080557.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 60491 61945 . + . ID=gene-VMS06_RS20750;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=VMS06_RS20750 NZ_JAVXZI010000022.1 Protein Homology CDS 60491 61945 . + 0 ID=cds-WP_063843934.1;Parent=gene-VMS06_RS20750;Dbxref=GenBank:WP_063843934.1;Name=WP_063843934.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312474.1;locus_tag=VMS06_RS20750;product=xylulokinase;protein_id=WP_063843934.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 61998 62993 . - . ID=gene-VMS06_RS20755;Name=VMS06_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20755 NZ_JAVXZI010000022.1 Protein Homology CDS 61998 62993 . - 0 ID=cds-WP_022649743.1;Parent=gene-VMS06_RS20755;Dbxref=GenBank:WP_022649743.1;Name=WP_022649743.1;Ontology_term=GO:0016413,GO:0016747;gbkey=CDS;go_function=O-acetyltransferase activity|0016413||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709348.1;locus_tag=VMS06_RS20755;product=acyltransferase;protein_id=WP_022649743.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 63178 63483 . + . ID=gene-VMS06_RS20760;Name=VMS06_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20760 NZ_JAVXZI010000022.1 Protein Homology CDS 63178 63483 . + 0 ID=cds-WP_022649742.1;Parent=gene-VMS06_RS20760;Dbxref=GenBank:WP_022649742.1;Name=WP_022649742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000605595.1;locus_tag=VMS06_RS20760;product=YsaB family lipoprotein;protein_id=WP_022649742.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 63644 64555 . + . ID=gene-VMS06_RS20765;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=VMS06_RS20765 NZ_JAVXZI010000022.1 Protein Homology CDS 63644 64555 . + 0 ID=cds-WP_003860141.1;Parent=gene-VMS06_RS20765;Dbxref=GenBank:WP_003860141.1;Name=WP_003860141.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229382.1;locus_tag=VMS06_RS20765;product=glycine--tRNA ligase subunit alpha;protein_id=WP_003860141.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 64565 66634 . + . ID=gene-VMS06_RS20770;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=VMS06_RS20770 NZ_JAVXZI010000022.1 Protein Homology CDS 64565 66634 . + 0 ID=cds-WP_022649741.1;Parent=gene-VMS06_RS20770;Dbxref=GenBank:WP_022649741.1;Name=WP_022649741.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=VMS06_RS20770;product=glycine--tRNA ligase subunit beta;protein_id=WP_022649741.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 66824 67987 . - . ID=gene-VMS06_RS20775;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=VMS06_RS20775 NZ_JAVXZI010000022.1 Protein Homology CDS 66824 67987 . - 0 ID=cds-WP_000416981.1;Parent=gene-VMS06_RS20775;Dbxref=GenBank:WP_000416981.1;Name=WP_000416981.1;Ontology_term=GO:0006631,GO:0016042,GO:0003988,GO:0005737;gbkey=CDS;gene=fadA;go_component=cytoplasm|0005737||IEA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA,lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462867.1;locus_tag=VMS06_RS20775;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_000416981.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 67997 70186 . - . ID=gene-VMS06_RS20780;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=VMS06_RS20780 NZ_JAVXZI010000022.1 Protein Homology CDS 67997 70186 . - 0 ID=cds-WP_063148436.1;Parent=gene-VMS06_RS20780;Dbxref=GenBank:WP_063148436.1;Name=WP_063148436.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692,GO:0036125;gbkey=CDS;gene=fadB;go_component=fatty acid beta-oxidation multienzyme complex|0036125||IEA;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312801.1;locus_tag=VMS06_RS20780;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_063148436.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 70377 71708 . + . ID=gene-VMS06_RS20785;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=VMS06_RS20785 NZ_JAVXZI010000022.1 Protein Homology CDS 70377 71708 . + 0 ID=cds-WP_017382602.1;Parent=gene-VMS06_RS20785;Dbxref=GenBank:WP_017382602.1;Name=WP_017382602.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=VMS06_RS20785;product=Xaa-Pro dipeptidase;protein_id=WP_017382602.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 71708 72322 . + . ID=gene-VMS06_RS20790;Name=VMS06_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20790 NZ_JAVXZI010000022.1 Protein Homology CDS 71708 72322 . + 0 ID=cds-WP_015572737.1;Parent=gene-VMS06_RS20790;Dbxref=GenBank:WP_015572737.1;Name=WP_015572737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312803.2;locus_tag=VMS06_RS20790;product=IMPACT family protein;protein_id=WP_015572737.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 72364 73815 . + . ID=gene-VMS06_RS20795;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=VMS06_RS20795 NZ_JAVXZI010000022.1 Protein Homology CDS 72364 73815 . + 0 ID=cds-WP_022649737.1;Parent=gene-VMS06_RS20795;Dbxref=GenBank:WP_022649737.1;Name=WP_022649737.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=VMS06_RS20795;product=Trk system potassium transporter TrkH;protein_id=WP_022649737.1;transl_table=11 NZ_JAVXZI010000022.1 RefSeq gene 73826 74371 . + . ID=gene-VMS06_RS20800;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=VMS06_RS20800 NZ_JAVXZI010000022.1 Protein Homology CDS 73826 74371 . + 0 ID=cds-WP_022649736.1;Parent=gene-VMS06_RS20800;Dbxref=GenBank:WP_022649736.1;Name=WP_022649736.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501510.1;locus_tag=VMS06_RS20800;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_022649736.1;transl_table=11 ##sequence-region NZ_JAVXZI010000023.1 1 57732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000023.1 RefSeq region 1 57732 . + . ID=NZ_JAVXZI010000023.1:1..57732;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000023.1 RefSeq gene 1 255 . - . ID=gene-VMS06_RS20805;Name=VMS06_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20805;partial=true;start_range=.,1 NZ_JAVXZI010000023.1 Protein Homology CDS 1 255 . - 0 ID=cds-WP_000031672.1-2;Parent=gene-VMS06_RS20805;Dbxref=GenBank:WP_000031672.1;Name=WP_000031672.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=VMS06_RS20805;partial=true;product=GTP-binding protein;protein_id=WP_000031672.1;start_range=.,1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 325 2439 . - . ID=gene-VMS06_RS20810;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=VMS06_RS20810 NZ_JAVXZI010000023.1 Protein Homology CDS 325 2439 . - 0 ID=cds-WP_022649591.1;Parent=gene-VMS06_RS20810;Dbxref=GenBank:WP_022649591.1;Name=WP_022649591.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=VMS06_RS20810;product=elongation factor G;protein_id=WP_022649591.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 2536 3006 . - . ID=gene-VMS06_RS20815;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=VMS06_RS20815 NZ_JAVXZI010000023.1 Protein Homology CDS 2536 3006 . - 0 ID=cds-WP_003861706.1;Parent=gene-VMS06_RS20815;Dbxref=GenBank:WP_003861706.1;Name=WP_003861706.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=VMS06_RS20815;product=30S ribosomal protein S7;protein_id=WP_003861706.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 3103 3477 . - . ID=gene-VMS06_RS20820;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=VMS06_RS20820 NZ_JAVXZI010000023.1 Protein Homology CDS 3103 3477 . - 0 ID=cds-WP_000246815.1;Parent=gene-VMS06_RS20820;Dbxref=GenBank:WP_000246815.1;Name=WP_000246815.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=VMS06_RS20820;product=30S ribosomal protein S12;protein_id=WP_000246815.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 3602 3889 . - . ID=gene-VMS06_RS20825;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=VMS06_RS20825 NZ_JAVXZI010000023.1 Protein Homology CDS 3602 3889 . - 0 ID=cds-WP_022649592.1;Parent=gene-VMS06_RS20825;Dbxref=GenBank:WP_022649592.1;Name=WP_022649592.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571409.1;locus_tag=VMS06_RS20825;product=sulfurtransferase complex subunit TusB;protein_id=WP_022649592.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 3897 4256 . - . ID=gene-VMS06_RS20830;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=VMS06_RS20830 NZ_JAVXZI010000023.1 Protein Homology CDS 3897 4256 . - 0 ID=cds-WP_023298759.1;Parent=gene-VMS06_RS20830;Dbxref=GenBank:WP_023298759.1;Name=WP_023298759.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177824.1;locus_tag=VMS06_RS20830;product=sulfurtransferase complex subunit TusC;protein_id=WP_023298759.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 4256 4642 . - . ID=gene-VMS06_RS20835;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=VMS06_RS20835 NZ_JAVXZI010000023.1 Protein Homology CDS 4256 4642 . - 0 ID=cds-WP_003861699.1;Parent=gene-VMS06_RS20835;Dbxref=GenBank:WP_003861699.1;Name=WP_003861699.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462355.1;locus_tag=VMS06_RS20835;product=sulfurtransferase complex subunit TusD;protein_id=WP_003861699.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 4642 5364 . - . ID=gene-VMS06_RS20840;Name=VMS06_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20840 NZ_JAVXZI010000023.1 Protein Homology CDS 4642 5364 . - 0 ID=cds-WP_003861697.1;Parent=gene-VMS06_RS20840;Dbxref=GenBank:WP_003861697.1;Name=WP_003861697.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709120.2;locus_tag=VMS06_RS20840;product=helix-turn-helix transcriptional regulator;protein_id=WP_003861697.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 5532 6350 . - . ID=gene-VMS06_RS20845;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=VMS06_RS20845 NZ_JAVXZI010000023.1 Protein Homology CDS 5532 6350 . - 0 ID=cds-WP_003861695.1;Parent=gene-VMS06_RS20845;Dbxref=GenBank:WP_003861695.1;Name=WP_003861695.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462357.1;locus_tag=VMS06_RS20845;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_003861695.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 6589 6807 . + . ID=gene-VMS06_RS20850;Name=VMS06_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20850 NZ_JAVXZI010000023.1 Protein Homology CDS 6589 6807 . + 0 ID=cds-WP_023298761.1;Parent=gene-VMS06_RS20850;Dbxref=GenBank:WP_023298761.1;Name=WP_023298761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462358.1;locus_tag=VMS06_RS20850;product=protein SlyX;protein_id=WP_023298761.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 6859 7449 . - . ID=gene-VMS06_RS20855;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=VMS06_RS20855 NZ_JAVXZI010000023.1 Protein Homology CDS 6859 7449 . - 0 ID=cds-WP_003861691.1;Parent=gene-VMS06_RS20855;Dbxref=GenBank:WP_003861691.1;Name=WP_003861691.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229184.1;locus_tag=VMS06_RS20855;product=peptidylprolyl isomerase;protein_id=WP_003861691.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 7544 7744 . - . ID=gene-VMS06_RS20860;Name=VMS06_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20860 NZ_JAVXZI010000023.1 Protein Homology CDS 7544 7744 . - 0 ID=cds-WP_038416829.1;Parent=gene-VMS06_RS20860;Dbxref=GenBank:WP_038416829.1;Name=WP_038416829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588468.1;locus_tag=VMS06_RS20860;product=YheV family putative zinc ribbon protein;protein_id=WP_038416829.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 7758 9563 . - . ID=gene-VMS06_RS20865;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=VMS06_RS20865 NZ_JAVXZI010000023.1 Protein Homology CDS 7758 9563 . - 0 ID=cds-WP_003861688.1;Parent=gene-VMS06_RS20865;Dbxref=GenBank:WP_003861688.1;Name=WP_003861688.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455504.1;locus_tag=VMS06_RS20865;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_003861688.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 9563 10114 . - . ID=gene-VMS06_RS20870;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=VMS06_RS20870 NZ_JAVXZI010000023.1 Protein Homology CDS 9563 10114 . - 0 ID=cds-WP_003861686.1;Parent=gene-VMS06_RS20870;Dbxref=GenBank:WP_003861686.1;Name=WP_003861686.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709126.2;locus_tag=VMS06_RS20870;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_003861686.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 10247 12151 . + . ID=gene-VMS06_RS20875;Name=VMS06_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20875 NZ_JAVXZI010000023.1 Protein Homology CDS 10247 12151 . + 0 ID=cds-WP_023298762.1;Parent=gene-VMS06_RS20875;Dbxref=GenBank:WP_023298762.1;Name=WP_023298762.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436309.1;locus_tag=VMS06_RS20875;product=ABC transporter ATP-binding protein;protein_id=WP_023298762.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 12167 13099 . + . ID=gene-VMS06_RS20880;Name=VMS06_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20880 NZ_JAVXZI010000023.1 Protein Homology CDS 12167 13099 . + 0 ID=cds-WP_022649599.1;Parent=gene-VMS06_RS20880;Dbxref=GenBank:WP_022649599.1;Name=WP_022649599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571415.1;locus_tag=VMS06_RS20880;product=LysR substrate-binding domain-containing protein;protein_id=WP_022649599.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 13202 14098 . - . ID=gene-VMS06_RS20885;Name=mdcH;gbkey=Gene;gene=mdcH;gene_biotype=protein_coding;locus_tag=VMS06_RS20885 NZ_JAVXZI010000023.1 Protein Homology CDS 13202 14098 . - 0 ID=cds-WP_022649600.1;Parent=gene-VMS06_RS20885;Dbxref=GenBank:WP_022649600.1;Name=WP_022649600.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdcH;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000697267.1;locus_tag=VMS06_RS20885;product=malonate decarboxylase subunit epsilon;protein_id=WP_022649600.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 14098 14715 . - . ID=gene-VMS06_RS20890;Name=VMS06_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20890 NZ_JAVXZI010000023.1 Protein Homology CDS 14098 14715 . - 0 ID=cds-WP_048966615.1;Parent=gene-VMS06_RS20890;Dbxref=GenBank:WP_048966615.1;Name=WP_048966615.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861679.1;locus_tag=VMS06_RS20890;product=malonate decarboxylase holo-ACP synthase;protein_id=WP_048966615.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 14718 15677 . - . ID=gene-VMS06_RS20895;Name=VMS06_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20895 NZ_JAVXZI010000023.1 Protein Homology CDS 14718 15677 . - 0 ID=cds-WP_023307100.1;Parent=gene-VMS06_RS20895;Dbxref=GenBank:WP_023307100.1;Name=WP_023307100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226767.1;locus_tag=VMS06_RS20895;product=AEC family transporter;protein_id=WP_023307100.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 15801 16601 . - . ID=gene-VMS06_RS20900;Name=mdcE;gbkey=Gene;gene=mdcE;gene_biotype=protein_coding;locus_tag=VMS06_RS20900 NZ_JAVXZI010000023.1 Protein Homology CDS 15801 16601 . - 0 ID=cds-WP_063148443.1;Parent=gene-VMS06_RS20900;Dbxref=GenBank:WP_063148443.1;Name=WP_063148443.1;Ontology_term=GO:0005975;gbkey=CDS;gene=mdcE;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007669339.1;locus_tag=VMS06_RS20900;product=biotin-independent malonate decarboxylase subunit gamma;protein_id=WP_063148443.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 16601 17434 . - . ID=gene-VMS06_RS20905;Name=VMS06_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20905 NZ_JAVXZI010000023.1 Protein Homology CDS 16601 17434 . - 0 ID=cds-WP_003861672.1;Parent=gene-VMS06_RS20905;Dbxref=GenBank:WP_003861672.1;Name=WP_003861672.1;Ontology_term=GO:0005975,GO:0006633,GO:0003989,GO:0016831,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,carboxy-lyase activity|0016831||IEA;go_process=carbohydrate metabolic process|0005975||IEA,fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226769.1;locus_tag=VMS06_RS20905;product=biotin-independent malonate decarboxylase subunit beta;protein_id=WP_003861672.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 17427 17726 . - . ID=gene-VMS06_RS20910;Name=mdcC;gbkey=Gene;gene=mdcC;gene_biotype=protein_coding;locus_tag=VMS06_RS20910 NZ_JAVXZI010000023.1 Protein Homology CDS 17427 17726 . - 0 ID=cds-WP_000411786.1;Parent=gene-VMS06_RS20910;Dbxref=GenBank:WP_000411786.1;Name=WP_000411786.1;gbkey=CDS;gene=mdcC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020884595.1;locus_tag=VMS06_RS20910;product=malonate decarboxylase acyl carrier protein;protein_id=WP_000411786.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 17736 18593 . - . ID=gene-VMS06_RS20915;Name=VMS06_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20915 NZ_JAVXZI010000023.1 Protein Homology CDS 17736 18593 . - 0 ID=cds-WP_022649605.1;Parent=gene-VMS06_RS20915;Dbxref=GenBank:WP_022649605.1;Name=WP_022649605.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384166.1;locus_tag=VMS06_RS20915;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_022649605.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 18593 20248 . - . ID=gene-VMS06_RS20920;Name=mdcA;gbkey=Gene;gene=mdcA;gene_biotype=protein_coding;locus_tag=VMS06_RS20920 NZ_JAVXZI010000023.1 Protein Homology CDS 18593 20248 . - 0 ID=cds-WP_023330194.1;Parent=gene-VMS06_RS20920;Dbxref=GenBank:WP_023330194.1;Name=WP_023330194.1;Ontology_term=GO:0006810,GO:0015451,GO:0016740;gbkey=CDS;gene=mdcA;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA,transferase activity|0016740||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459879.1;locus_tag=VMS06_RS20920;product=malonate decarboxylase subunit alpha;protein_id=WP_023330194.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 20477 21499 . + . ID=gene-VMS06_RS20925;Name=VMS06_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20925 NZ_JAVXZI010000023.1 Protein Homology CDS 20477 21499 . + 0 ID=cds-WP_032626777.1;Parent=gene-VMS06_RS20925;Dbxref=GenBank:WP_032626777.1;Name=WP_032626777.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072080.1;locus_tag=VMS06_RS20925;product=hydrolase;protein_id=WP_032626777.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 21496 21714 . + . ID=gene-VMS06_RS20930;Name=VMS06_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20930 NZ_JAVXZI010000023.1 Protein Homology CDS 21496 21714 . + 0 ID=cds-WP_022649608.1;Parent=gene-VMS06_RS20930;Dbxref=GenBank:WP_022649608.1;Name=WP_022649608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177849.1;locus_tag=VMS06_RS20930;product=YheU family protein;protein_id=WP_022649608.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 21744 22613 . + . ID=gene-VMS06_RS20935;Name=VMS06_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20935 NZ_JAVXZI010000023.1 Protein Homology CDS 21744 22613 . + 0 ID=cds-WP_003861663.1;Parent=gene-VMS06_RS20935;Dbxref=GenBank:WP_003861663.1;Name=WP_003861663.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007702561.1;locus_tag=VMS06_RS20935;product=phosphoribulokinase;protein_id=WP_003861663.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 22699 23103 . - . ID=gene-VMS06_RS20940;Name=VMS06_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20940 NZ_JAVXZI010000023.1 Protein Homology CDS 22699 23103 . - 0 ID=cds-WP_063148437.1;Parent=gene-VMS06_RS20940;Dbxref=GenBank:WP_063148437.1;Name=WP_063148437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312234.1;locus_tag=VMS06_RS20940;product=OsmC family protein;protein_id=WP_063148437.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 23414 24046 . + . ID=gene-VMS06_RS20945;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=VMS06_RS20945 NZ_JAVXZI010000023.1 Protein Homology CDS 23414 24046 . + 0 ID=cds-WP_000242758.1;Parent=gene-VMS06_RS20945;Dbxref=GenBank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=VMS06_RS20945;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 24104 26191 . + . ID=gene-VMS06_RS20950;Name=VMS06_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20950 NZ_JAVXZI010000023.1 Protein Homology CDS 24104 26191 . + 0 ID=cds-WP_323630709.1;Parent=gene-VMS06_RS20950;Dbxref=GenBank:WP_323630709.1;Name=WP_323630709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812214.1;locus_tag=VMS06_RS20950;product=YccS/YhfK family putative transporter;protein_id=WP_323630709.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 26188 27408 . - . ID=gene-VMS06_RS20955;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=VMS06_RS20955 NZ_JAVXZI010000023.1 Protein Homology CDS 26188 27408 . - 0 ID=cds-WP_180240260.1;Parent=gene-VMS06_RS20955;Dbxref=GenBank:WP_180240260.1;Name=WP_180240260.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436339.1;locus_tag=VMS06_RS20955;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_180240260.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 27496 28059 . - . ID=gene-VMS06_RS20960;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=VMS06_RS20960 NZ_JAVXZI010000023.1 Protein Homology CDS 27496 28059 . - 0 ID=cds-WP_023298770.1;Parent=gene-VMS06_RS20960;Dbxref=GenBank:WP_023298770.1;Name=WP_023298770.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312238.1;locus_tag=VMS06_RS20960;product=aminodeoxychorismate synthase component 2;protein_id=WP_023298770.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 28090 28674 . - . ID=gene-VMS06_RS20965;Name=VMS06_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20965 NZ_JAVXZI010000023.1 Protein Homology CDS 28090 28674 . - 0 ID=cds-WP_063148439.1;Parent=gene-VMS06_RS20965;Dbxref=GenBank:WP_063148439.1;Name=WP_063148439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885513.1;locus_tag=VMS06_RS20965;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_063148439.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 28780 29352 . - . ID=gene-VMS06_RS20970;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=VMS06_RS20970 NZ_JAVXZI010000023.1 Protein Homology CDS 28780 29352 . - 0 ID=cds-WP_022649614.1;Parent=gene-VMS06_RS20970;Dbxref=GenBank:WP_022649614.1;Name=WP_022649614.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462375.1;locus_tag=VMS06_RS20970;product=peptidylprolyl isomerase A;protein_id=WP_022649614.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 29631 30815 . + . ID=gene-VMS06_RS20975;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=VMS06_RS20975 NZ_JAVXZI010000023.1 Protein Homology CDS 29631 30815 . + 0 ID=cds-WP_022649615.1;Parent=gene-VMS06_RS20975;Dbxref=GenBank:WP_022649615.1;Name=WP_022649615.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229201.1;locus_tag=VMS06_RS20975;product=MFS transporter TsgA;protein_id=WP_022649615.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 31076 33619 . + . ID=gene-VMS06_RS20980;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=VMS06_RS20980 NZ_JAVXZI010000023.1 Protein Homology CDS 31076 33619 . + 0 ID=cds-WP_022649616.1;Parent=gene-VMS06_RS20980;Dbxref=GenBank:WP_022649616.1;Name=WP_022649616.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462377.1;locus_tag=VMS06_RS20980;product=nitrite reductase large subunit NirB;protein_id=WP_022649616.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 33616 33942 . + . ID=gene-VMS06_RS20985;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=VMS06_RS20985 NZ_JAVXZI010000023.1 Protein Homology CDS 33616 33942 . + 0 ID=cds-WP_022649617.1;Parent=gene-VMS06_RS20985;Dbxref=GenBank:WP_022649617.1;Name=WP_022649617.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571429.1;locus_tag=VMS06_RS20985;product=nitrite reductase small subunit NirD;protein_id=WP_022649617.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 34077 35450 . + . ID=gene-VMS06_RS20990;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=VMS06_RS20990 NZ_JAVXZI010000023.1 Protein Homology CDS 34077 35450 . + 0 ID=cds-WP_023298772.1;Parent=gene-VMS06_RS20990;Dbxref=GenBank:WP_023298772.1;Name=WP_023298772.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462380.1;locus_tag=VMS06_RS20990;product=siroheme synthase CysG;protein_id=WP_023298772.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 35597 35767 . + . ID=gene-VMS06_RS20995;Name=VMS06_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS20995 NZ_JAVXZI010000023.1 Protein Homology CDS 35597 35767 . + 0 ID=cds-WP_003861638.1;Parent=gene-VMS06_RS20995;Dbxref=GenBank:WP_003861638.1;Name=WP_003861638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462383.1;locus_tag=VMS06_RS20995;product=YhfL family protein;protein_id=WP_003861638.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 35905 36909 . - . ID=gene-VMS06_RS21000;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=VMS06_RS21000 NZ_JAVXZI010000023.1 Protein Homology CDS 35905 36909 . - 0 ID=cds-WP_323630708.1;Parent=gene-VMS06_RS21000;Dbxref=GenBank:WP_323630708.1;Name=WP_323630708.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312253.1;locus_tag=VMS06_RS21000;product=tryptophan--tRNA ligase;protein_id=WP_323630708.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 36902 37663 . - . ID=gene-VMS06_RS21005;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=VMS06_RS21005 NZ_JAVXZI010000023.1 Protein Homology CDS 36902 37663 . - 0 ID=cds-WP_017384158.1;Parent=gene-VMS06_RS21005;Dbxref=GenBank:WP_017384158.1;Name=WP_017384158.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229208.1;locus_tag=VMS06_RS21005;product=phosphoglycolate phosphatase;protein_id=WP_017384158.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 37656 38333 . - . ID=gene-VMS06_RS21010;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=VMS06_RS21010 NZ_JAVXZI010000023.1 Protein Homology CDS 37656 38333 . - 0 ID=cds-WP_003861634.1;Parent=gene-VMS06_RS21010;Dbxref=GenBank:WP_003861634.1;Name=WP_003861634.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462386.1;locus_tag=VMS06_RS21010;product=ribulose-phosphate 3-epimerase;protein_id=WP_003861634.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 38373 39185 . - . ID=gene-VMS06_RS21015;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=VMS06_RS21015 NZ_JAVXZI010000023.1 Protein Homology CDS 38373 39185 . - 0 ID=cds-WP_003861633.1;Parent=gene-VMS06_RS21015;Dbxref=GenBank:WP_003861633.1;Name=WP_003861633.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014885524.1;locus_tag=VMS06_RS21015;product=adenine-specific DNA-methyltransferase;protein_id=WP_003861633.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 39253 40551 . - . ID=gene-VMS06_RS21020;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=VMS06_RS21020 NZ_JAVXZI010000023.1 Protein Homology CDS 39253 40551 . - 0 ID=cds-WP_032626787.1;Parent=gene-VMS06_RS21020;Dbxref=GenBank:WP_032626787.1;Name=WP_032626787.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861632.1;locus_tag=VMS06_RS21020;product=cell division protein DamX;protein_id=WP_032626787.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 40644 41732 . - . ID=gene-VMS06_RS21025;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=VMS06_RS21025 NZ_JAVXZI010000023.1 Protein Homology CDS 40644 41732 . - 0 ID=cds-WP_038416842.1;Parent=gene-VMS06_RS21025;Dbxref=GenBank:WP_038416842.1;Name=WP_038416842.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417848.1;locus_tag=VMS06_RS21025;product=3-dehydroquinate synthase;protein_id=WP_038416842.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 41790 42311 . - . ID=gene-VMS06_RS21030;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=VMS06_RS21030 NZ_JAVXZI010000023.1 Protein Homology CDS 41790 42311 . - 0 ID=cds-WP_003861630.1;Parent=gene-VMS06_RS21030;Dbxref=GenBank:WP_003861630.1;Name=WP_003861630.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=VMS06_RS21030;product=shikimate kinase AroK;protein_id=WP_003861630.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 42598 43836 . - . ID=gene-VMS06_RS21035;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=VMS06_RS21035 NZ_JAVXZI010000023.1 Protein Homology CDS 42598 43836 . - 0 ID=cds-WP_045308978.1;Parent=gene-VMS06_RS21035;Dbxref=GenBank:WP_045308978.1;Name=WP_045308978.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384156.1;locus_tag=VMS06_RS21035;product=DNA uptake porin HofQ;protein_id=WP_045308978.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 43748 44152 . - . ID=gene-VMS06_RS21040;Name=VMS06_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21040 NZ_JAVXZI010000023.1 Protein Homology CDS 43748 44152 . - 0 ID=cds-WP_063148441.1;Parent=gene-VMS06_RS21040;Dbxref=GenBank:WP_063148441.1;Name=WP_063148441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812230.1;locus_tag=VMS06_RS21040;product=HofP DNA utilization family protein;protein_id=WP_063148441.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 44142 44594 . - . ID=gene-VMS06_RS21045;Name=VMS06_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21045 NZ_JAVXZI010000023.1 Protein Homology CDS 44142 44594 . - 0 ID=cds-WP_022649624.1;Parent=gene-VMS06_RS21045;Dbxref=GenBank:WP_022649624.1;Name=WP_022649624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384155.1;locus_tag=VMS06_RS21045;product=HofO family protein;protein_id=WP_022649624.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 44598 45092 . - . ID=gene-VMS06_RS21050;Name=VMS06_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21050 NZ_JAVXZI010000023.1 Protein Homology CDS 44598 45092 . - 0 ID=cds-WP_023307110.1;Parent=gene-VMS06_RS21050;Dbxref=GenBank:WP_023307110.1;Name=WP_023307110.1;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812232.1;locus_tag=VMS06_RS21050;product=PilN domain-containing protein;protein_id=WP_023307110.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 45092 45865 . - . ID=gene-VMS06_RS21055;Name=VMS06_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21055 NZ_JAVXZI010000023.1 Protein Homology CDS 45092 45865 . - 0 ID=cds-WP_022649626.1;Parent=gene-VMS06_RS21055;Dbxref=GenBank:WP_022649626.1;Name=WP_022649626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861624.1;locus_tag=VMS06_RS21055;product=type IV pilus biogenesis protein PilM;protein_id=WP_022649626.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 45986 48538 . + . ID=gene-VMS06_RS21060;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=VMS06_RS21060 NZ_JAVXZI010000023.1 Protein Homology CDS 45986 48538 . + 0 ID=cds-WP_045308980.1;Parent=gene-VMS06_RS21060;Dbxref=GenBank:WP_045308980.1;Name=WP_045308980.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=VMS06_RS21060;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_045308980.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 48632 49192 . - . ID=gene-VMS06_RS21065;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=VMS06_RS21065 NZ_JAVXZI010000023.1 Protein Homology CDS 48632 49192 . - 0 ID=cds-WP_003861622.1;Parent=gene-VMS06_RS21065;Dbxref=GenBank:WP_003861622.1;Name=WP_003861622.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312266.1;locus_tag=VMS06_RS21065;product=ADP compounds hydrolase NudE;protein_id=WP_003861622.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 49520 51658 . + . ID=gene-VMS06_RS21070;Name=VMS06_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21070 NZ_JAVXZI010000023.1 Protein Homology CDS 49520 51658 . + 0 ID=cds-WP_023298780.1;Parent=gene-VMS06_RS21070;Dbxref=GenBank:WP_023298780.1;Name=WP_023298780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812236.1;locus_tag=VMS06_RS21070;product=intracellular growth attenuator family protein;protein_id=WP_023298780.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 51723 52406 . + . ID=gene-VMS06_RS21075;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=VMS06_RS21075 NZ_JAVXZI010000023.1 Protein Homology CDS 51723 52406 . + 0 ID=cds-WP_003861619.1;Parent=gene-VMS06_RS21075;Dbxref=GenBank:WP_003861619.1;Name=WP_003861619.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861619.1;locus_tag=VMS06_RS21075;product=GMP/IMP nucleotidase;protein_id=WP_003861619.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 52403 52804 . + . ID=gene-VMS06_RS21080;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=VMS06_RS21080 NZ_JAVXZI010000023.1 Protein Homology CDS 52403 52804 . + 0 ID=cds-WP_003861618.1;Parent=gene-VMS06_RS21080;Dbxref=GenBank:WP_003861618.1;Name=WP_003861618.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312269.1;locus_tag=VMS06_RS21080;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_003861618.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 52823 53707 . + . ID=gene-VMS06_RS21085;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=VMS06_RS21085 NZ_JAVXZI010000023.1 Protein Homology CDS 52823 53707 . + 0 ID=cds-WP_006812239.1;Parent=gene-VMS06_RS21085;Dbxref=GenBank:WP_006812239.1;Name=WP_006812239.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229223.1;locus_tag=VMS06_RS21085;product=Hsp33 family molecular chaperone HslO;protein_id=WP_006812239.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 53830 55587 . - . ID=gene-VMS06_RS21090;Name=VMS06_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21090 NZ_JAVXZI010000023.1 Protein Homology CDS 53830 55587 . - 0 ID=cds-WP_063148442.1;Parent=gene-VMS06_RS21090;Dbxref=GenBank:WP_063148442.1;Name=WP_063148442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693861.1;locus_tag=VMS06_RS21090;product=DUF4153 domain-containing protein;protein_id=WP_063148442.1;transl_table=11 NZ_JAVXZI010000023.1 RefSeq gene 55964 57580 . + . ID=gene-VMS06_RS21095;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=VMS06_RS21095 NZ_JAVXZI010000023.1 Protein Homology CDS 55964 57580 . + 0 ID=cds-WP_032626808.1;Parent=gene-VMS06_RS21095;Dbxref=GenBank:WP_032626808.1;Name=WP_032626808.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015571439.1;locus_tag=VMS06_RS21095;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_032626808.1;transl_table=11 ##sequence-region NZ_JAVXZI010000024.1 1 47859 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000024.1 RefSeq region 1 47859 . + . ID=NZ_JAVXZI010000024.1:1..47859;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000024.1 RefSeq gene 140 1420 . - . ID=gene-VMS06_RS21100;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=VMS06_RS21100 NZ_JAVXZI010000024.1 Protein Homology CDS 140 1420 . - 0 ID=cds-WP_063148456.1;Parent=gene-VMS06_RS21100;Dbxref=GenBank:WP_063148456.1;Name=WP_063148456.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=VMS06_RS21100;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_063148456.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 1598 2998 . + . ID=gene-VMS06_RS21105;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=VMS06_RS21105 NZ_JAVXZI010000024.1 Protein Homology CDS 1598 2998 . + 0 ID=cds-WP_022647097.1;Parent=gene-VMS06_RS21105;Dbxref=GenBank:WP_022647097.1;Name=WP_022647097.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810053.1;locus_tag=VMS06_RS21105;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_022647097.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 3084 3428 . + . ID=gene-VMS06_RS21110;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=VMS06_RS21110 NZ_JAVXZI010000024.1 Protein Homology CDS 3084 3428 . + 0 ID=cds-WP_003856230.1;Parent=gene-VMS06_RS21110;Dbxref=GenBank:WP_003856230.1;Name=WP_003856230.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=VMS06_RS21110;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_003856230.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 3486 4109 . - . ID=gene-VMS06_RS21115;Name=VMS06_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21115 NZ_JAVXZI010000024.1 Protein Homology CDS 3486 4109 . - 0 ID=cds-WP_003856227.1;Parent=gene-VMS06_RS21115;Dbxref=GenBank:WP_003856227.1;Name=WP_003856227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132135.1;locus_tag=VMS06_RS21115;product=TRIC cation channel family protein;protein_id=WP_003856227.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 4133 4942 . - . ID=gene-VMS06_RS21120;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=VMS06_RS21120 NZ_JAVXZI010000024.1 Protein Homology CDS 4133 4942 . - 0 ID=cds-WP_023299362.1;Parent=gene-VMS06_RS21120;Dbxref=GenBank:WP_023299362.1;Name=WP_023299362.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856225.1;locus_tag=VMS06_RS21120;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_023299362.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 4935 5633 . - . ID=gene-VMS06_RS21125;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=VMS06_RS21125 NZ_JAVXZI010000024.1 Protein Homology CDS 4935 5633 . - 0 ID=cds-WP_003856223.1;Parent=gene-VMS06_RS21125;Dbxref=GenBank:WP_003856223.1;Name=WP_003856223.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308190.1;locus_tag=VMS06_RS21125;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_003856223.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 5716 7230 . + . ID=gene-VMS06_RS21130;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=VMS06_RS21130 NZ_JAVXZI010000024.1 Protein Homology CDS 5716 7230 . + 0 ID=cds-WP_032625565.1;Parent=gene-VMS06_RS21130;Dbxref=GenBank:WP_032625565.1;Name=WP_032625565.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694485.1;locus_tag=VMS06_RS21130;product=dGTPase;protein_id=WP_032625565.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 7363 8796 . + . ID=gene-VMS06_RS21135;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=VMS06_RS21135 NZ_JAVXZI010000024.1 Protein Homology CDS 7363 8796 . + 0 ID=cds-WP_022647101.1;Parent=gene-VMS06_RS21135;Dbxref=GenBank:WP_022647101.1;Name=WP_022647101.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=VMS06_RS21135;product=serine endoprotease DegP;protein_id=WP_022647101.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 8943 10100 . + . ID=gene-VMS06_RS21140;Name=VMS06_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21140 NZ_JAVXZI010000024.1 Protein Homology CDS 8943 10100 . + 0 ID=cds-WP_003856217.1;Parent=gene-VMS06_RS21140;Dbxref=GenBank:WP_003856217.1;Name=WP_003856217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=VMS06_RS21140;product=CdaR family transcriptional regulator;protein_id=WP_003856217.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 10190 10579 . - . ID=gene-VMS06_RS21145;Name=VMS06_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21145 NZ_JAVXZI010000024.1 Protein Homology CDS 10190 10579 . - 0 ID=cds-WP_022647102.1;Parent=gene-VMS06_RS21145;Dbxref=GenBank:WP_022647102.1;Name=WP_022647102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098742.1;locus_tag=VMS06_RS21145;product=DUF3461 family protein;protein_id=WP_022647102.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 10691 11515 . - . ID=gene-VMS06_RS21150;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=VMS06_RS21150 NZ_JAVXZI010000024.1 Protein Homology CDS 10691 11515 . - 0 ID=cds-WP_023299365.1;Parent=gene-VMS06_RS21150;Dbxref=GenBank:WP_023299365.1;Name=WP_023299365.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=L-lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=VMS06_RS21150;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_023299365.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 11548 14223 . - . ID=gene-VMS06_RS21155;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=VMS06_RS21155 NZ_JAVXZI010000024.1 Protein Homology CDS 11548 14223 . - 0 ID=cds-WP_032676702.1;Parent=gene-VMS06_RS21155;Dbxref=GenBank:WP_032676702.1;Name=WP_032676702.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012016113.1;locus_tag=VMS06_RS21155;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_032676702.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 14286 15080 . - . ID=gene-VMS06_RS21160;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=VMS06_RS21160 NZ_JAVXZI010000024.1 Protein Homology CDS 14286 15080 . - 0 ID=cds-WP_022647104.1;Parent=gene-VMS06_RS21160;Dbxref=GenBank:WP_022647104.1;Name=WP_022647104.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459220.1;locus_tag=VMS06_RS21160;product=type I methionyl aminopeptidase;protein_id=WP_022647104.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 15402 16127 . + . ID=gene-VMS06_RS21165;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=VMS06_RS21165 NZ_JAVXZI010000024.1 Protein Homology CDS 15402 16127 . + 0 ID=cds-WP_022647105.1;Parent=gene-VMS06_RS21165;Dbxref=GenBank:WP_022647105.1;Name=WP_022647105.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=VMS06_RS21165;product=30S ribosomal protein S2;protein_id=WP_022647105.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 16245 17096 . + . ID=gene-VMS06_RS21170;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=VMS06_RS21170 NZ_JAVXZI010000024.1 Protein Homology CDS 16245 17096 . + 0 ID=cds-WP_015572722.1;Parent=gene-VMS06_RS21170;Dbxref=GenBank:WP_015572722.1;Name=WP_015572722.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=VMS06_RS21170;product=translation elongation factor Ts;protein_id=WP_015572722.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 17246 17971 . + . ID=gene-VMS06_RS21175;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=VMS06_RS21175 NZ_JAVXZI010000024.1 Protein Homology CDS 17246 17971 . + 0 ID=cds-WP_008501910.1;Parent=gene-VMS06_RS21175;Dbxref=GenBank:WP_008501910.1;Name=WP_008501910.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=VMS06_RS21175;product=UMP kinase;protein_id=WP_008501910.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 18139 18696 . + . ID=gene-VMS06_RS21180;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=VMS06_RS21180 NZ_JAVXZI010000024.1 Protein Homology CDS 18139 18696 . + 0 ID=cds-WP_003856180.1;Parent=gene-VMS06_RS21180;Dbxref=GenBank:WP_003856180.1;Name=WP_003856180.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=VMS06_RS21180;product=ribosome recycling factor;protein_id=WP_003856180.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 18789 19988 . + . ID=gene-VMS06_RS21185;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=VMS06_RS21185 NZ_JAVXZI010000024.1 Protein Homology CDS 18789 19988 . + 0 ID=cds-WP_023299367.1;Parent=gene-VMS06_RS21185;Dbxref=GenBank:WP_023299367.1;Name=WP_023299367.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014882630.1;locus_tag=VMS06_RS21185;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_023299367.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 20174 20932 . + . ID=gene-VMS06_RS21190;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=VMS06_RS21190 NZ_JAVXZI010000024.1 Protein Homology CDS 20174 20932 . + 0 ID=cds-WP_003856176.1;Parent=gene-VMS06_RS21190;Dbxref=GenBank:WP_003856176.1;Name=WP_003856176.1;Ontology_term=GO:0043164,GO:0004659,GO:0008834;gbkey=CDS;gene=ispU;go_function=prenyltransferase activity|0004659||IEA,ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [(2E%2C6E)-farnesyl-diphosphate specific] activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459226.1;locus_tag=VMS06_RS21190;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_003856176.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 20945 21802 . + . ID=gene-VMS06_RS21195;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=VMS06_RS21195 NZ_JAVXZI010000024.1 Protein Homology CDS 20945 21802 . + 0 ID=cds-WP_023299368.1;Parent=gene-VMS06_RS21195;Dbxref=GenBank:WP_023299368.1;Name=WP_023299368.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414717.2;locus_tag=VMS06_RS21195;product=phosphatidate cytidylyltransferase;protein_id=WP_023299368.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 21814 23166 . + . ID=gene-VMS06_RS21200;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=VMS06_RS21200 NZ_JAVXZI010000024.1 Protein Homology CDS 21814 23166 . + 0 ID=cds-WP_022647108.1;Parent=gene-VMS06_RS21200;Dbxref=GenBank:WP_022647108.1;Name=WP_022647108.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132106.1;locus_tag=VMS06_RS21200;product=sigma E protease regulator RseP;protein_id=WP_022647108.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 23198 25615 . + . ID=gene-VMS06_RS21205;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=VMS06_RS21205 NZ_JAVXZI010000024.1 Protein Homology CDS 23198 25615 . + 0 ID=cds-WP_022647109.1;Parent=gene-VMS06_RS21205;Dbxref=GenBank:WP_022647109.1;Name=WP_022647109.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308206.1;locus_tag=VMS06_RS21205;product=outer membrane protein assembly factor BamA;protein_id=WP_022647109.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 25739 26233 . + . ID=gene-VMS06_RS21210;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=VMS06_RS21210 NZ_JAVXZI010000024.1 Protein Homology CDS 25739 26233 . + 0 ID=cds-WP_006810039.1;Parent=gene-VMS06_RS21210;Dbxref=GenBank:WP_006810039.1;Name=WP_006810039.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459230.1;locus_tag=VMS06_RS21210;product=molecular chaperone Skp;protein_id=WP_006810039.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 26237 27262 . + . ID=gene-VMS06_RS21215;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=VMS06_RS21215 NZ_JAVXZI010000024.1 Protein Homology CDS 26237 27262 . + 0 ID=cds-WP_063148457.1;Parent=gene-VMS06_RS21215;Dbxref=GenBank:WP_063148457.1;Name=WP_063148457.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=VMS06_RS21215;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_063148457.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 27367 27822 . + . ID=gene-VMS06_RS21220;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=VMS06_RS21220 NZ_JAVXZI010000024.1 Protein Homology CDS 27367 27822 . + 0 ID=cds-WP_003856165.1;Parent=gene-VMS06_RS21220;Dbxref=GenBank:WP_003856165.1;Name=WP_003856165.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=VMS06_RS21220;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_003856165.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 27826 28614 . + . ID=gene-VMS06_RS21225;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=VMS06_RS21225 NZ_JAVXZI010000024.1 Protein Homology CDS 27826 28614 . + 0 ID=cds-WP_045333698.1;Parent=gene-VMS06_RS21225;Dbxref=GenBank:WP_045333698.1;Name=WP_045333698.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=VMS06_RS21225;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_045333698.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 28614 29762 . + . ID=gene-VMS06_RS21230;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=VMS06_RS21230 NZ_JAVXZI010000024.1 Protein Homology CDS 28614 29762 . + 0 ID=cds-WP_063148458.1;Parent=gene-VMS06_RS21230;Dbxref=GenBank:WP_063148458.1;Name=WP_063148458.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459234.1;locus_tag=VMS06_RS21230;product=lipid-A-disaccharide synthase;protein_id=WP_063148458.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 29759 30355 . + . ID=gene-VMS06_RS21235;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=VMS06_RS21235 NZ_JAVXZI010000024.1 Protein Homology CDS 29759 30355 . + 0 ID=cds-WP_022647112.1;Parent=gene-VMS06_RS21235;Dbxref=GenBank:WP_022647112.1;Name=WP_022647112.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308212.1;locus_tag=VMS06_RS21235;product=ribonuclease HII;protein_id=WP_022647112.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 30394 33876 . + . ID=gene-VMS06_RS21240;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=VMS06_RS21240 NZ_JAVXZI010000024.1 Protein Homology CDS 30394 33876 . + 0 ID=cds-WP_063148459.1;Parent=gene-VMS06_RS21240;Dbxref=GenBank:WP_063148459.1;Name=WP_063148459.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225231.1;locus_tag=VMS06_RS21240;product=DNA polymerase III subunit alpha;protein_id=WP_063148459.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 33889 34848 . + . ID=gene-VMS06_RS21245;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=VMS06_RS21245 NZ_JAVXZI010000024.1 Protein Homology CDS 33889 34848 . + 0 ID=cds-WP_003856154.1;Parent=gene-VMS06_RS21245;Dbxref=GenBank:WP_003856154.1;Name=WP_003856154.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=VMS06_RS21245;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_003856154.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 34949 37081 . + . ID=gene-VMS06_RS21250;Name=VMS06_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21250 NZ_JAVXZI010000024.1 Protein Homology CDS 34949 37081 . + 0 ID=cds-WP_058677790.1;Parent=gene-VMS06_RS21250;Dbxref=GenBank:WP_058677790.1;Name=WP_058677790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856152.1;locus_tag=VMS06_RS21250;product=lysine decarboxylase LdcC;protein_id=WP_058677790.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 37148 37537 . + . ID=gene-VMS06_RS21255;Name=VMS06_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21255 NZ_JAVXZI010000024.1 Protein Homology CDS 37148 37537 . + 0 ID=cds-WP_022647115.1;Parent=gene-VMS06_RS21255;Dbxref=GenBank:WP_022647115.1;Name=WP_022647115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308216.2;locus_tag=VMS06_RS21255;product=VOC family protein;protein_id=WP_022647115.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 37596 38882 . + . ID=gene-VMS06_RS21260;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=VMS06_RS21260 NZ_JAVXZI010000024.1 Protein Homology CDS 37596 38882 . + 0 ID=cds-WP_063148460.1;Parent=gene-VMS06_RS21260;Dbxref=GenBank:WP_063148460.1;Name=WP_063148460.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856150.1;locus_tag=VMS06_RS21260;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_063148460.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 38909 39169 . - . ID=gene-VMS06_RS21265;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=VMS06_RS21265 NZ_JAVXZI010000024.1 Protein Homology CDS 38909 39169 . - 0 ID=cds-WP_023305471.1;Parent=gene-VMS06_RS21265;Dbxref=GenBank:WP_023305471.1;Name=WP_023305471.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706134.1;locus_tag=VMS06_RS21265;product=Rho-binding antiterminator;protein_id=WP_023305471.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 39156 39356 . - . ID=gene-VMS06_RS21270;Name=VMS06_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21270 NZ_JAVXZI010000024.1 Protein Homology CDS 39156 39356 . - 0 ID=cds-WP_003856146.1;Parent=gene-VMS06_RS21270;Dbxref=GenBank:WP_003856146.1;Name=WP_003856146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=VMS06_RS21270;product=YaeP family protein;protein_id=WP_003856146.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 39552 40097 . + . ID=gene-VMS06_RS21275;Name=VMS06_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21275 NZ_JAVXZI010000024.1 Protein Homology CDS 39552 40097 . + 0 ID=cds-WP_022647118.1;Parent=gene-VMS06_RS21275;Dbxref=GenBank:WP_022647118.1;Name=WP_022647118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459244.1;locus_tag=VMS06_RS21275;product=YaeQ family protein;protein_id=WP_022647118.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 40094 40510 . + . ID=gene-VMS06_RS21280;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=VMS06_RS21280 NZ_JAVXZI010000024.1 Protein Homology CDS 40094 40510 . + 0 ID=cds-WP_022647119.1;Parent=gene-VMS06_RS21280;Dbxref=GenBank:WP_022647119.1;Name=WP_022647119.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810027.1;locus_tag=VMS06_RS21280;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_022647119.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 40550 41248 . + . ID=gene-VMS06_RS21285;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=VMS06_RS21285 NZ_JAVXZI010000024.1 Protein Homology CDS 40550 41248 . + 0 ID=cds-WP_006810026.1;Parent=gene-VMS06_RS21285;Dbxref=GenBank:WP_006810026.1;Name=WP_006810026.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008501886.1;locus_tag=VMS06_RS21285;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_006810026.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 41295 43013 . - . ID=gene-VMS06_RS21290;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=VMS06_RS21290 NZ_JAVXZI010000024.1 Protein Homology CDS 41295 43013 . - 0 ID=cds-WP_063148461.1;Parent=gene-VMS06_RS21290;Dbxref=GenBank:WP_063148461.1;Name=WP_063148461.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=VMS06_RS21290;product=proline--tRNA ligase;protein_id=WP_063148461.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 43126 43833 . - . ID=gene-VMS06_RS21295;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=VMS06_RS21295 NZ_JAVXZI010000024.1 Protein Homology CDS 43126 43833 . - 0 ID=cds-WP_063148462.1;Parent=gene-VMS06_RS21295;Dbxref=GenBank:WP_063148462.1;Name=WP_063148462.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225242.1;locus_tag=VMS06_RS21295;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_063148462.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 43830 44234 . - . ID=gene-VMS06_RS21300;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=VMS06_RS21300 NZ_JAVXZI010000024.1 Protein Homology CDS 43830 44234 . - 0 ID=cds-WP_003856133.1;Parent=gene-VMS06_RS21300;Dbxref=GenBank:WP_003856133.1;Name=WP_003856133.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=VMS06_RS21300;product=Rcs stress response system protein RcsF;protein_id=WP_003856133.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 44341 45156 . - . ID=gene-VMS06_RS21305;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=VMS06_RS21305 NZ_JAVXZI010000024.1 Protein Homology CDS 44341 45156 . - 0 ID=cds-WP_006810023.1;Parent=gene-VMS06_RS21305;Dbxref=GenBank:WP_006810023.1;Name=WP_006810023.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706143.1;locus_tag=VMS06_RS21305;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_006810023.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 45197 45850 . - . ID=gene-VMS06_RS21310;Name=VMS06_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21310 NZ_JAVXZI010000024.1 Protein Homology CDS 45197 45850 . - 0 ID=cds-WP_003856130.1;Parent=gene-VMS06_RS21310;Dbxref=GenBank:WP_003856130.1;Name=WP_003856130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=VMS06_RS21310;product=methionine ABC transporter permease MetI;protein_id=WP_003856130.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 45843 46874 . - . ID=gene-VMS06_RS21315;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=VMS06_RS21315 NZ_JAVXZI010000024.1 Protein Homology CDS 45843 46874 . - 0 ID=cds-WP_006810022.1;Parent=gene-VMS06_RS21315;Dbxref=GenBank:WP_006810022.1;Name=WP_006810022.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=VMS06_RS21315;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_006810022.1;transl_table=11 NZ_JAVXZI010000024.1 RefSeq gene 47063 47629 . + . ID=gene-VMS06_RS21320;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=VMS06_RS21320 NZ_JAVXZI010000024.1 Protein Homology CDS 47063 47629 . + 0 ID=cds-WP_022647122.1;Parent=gene-VMS06_RS21320;Dbxref=GenBank:WP_022647122.1;Name=WP_022647122.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225247.1;locus_tag=VMS06_RS21320;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_022647122.1;transl_table=11 ##sequence-region NZ_JAVXZI010000025.1 1 44948 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000025.1 RefSeq region 1 44948 . + . ID=NZ_JAVXZI010000025.1:1..44948;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000025.1 RefSeq gene 118 1242 . - . ID=gene-VMS06_RS21325;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=VMS06_RS21325 NZ_JAVXZI010000025.1 Protein Homology CDS 118 1242 . - 0 ID=cds-WP_063148471.1;Parent=gene-VMS06_RS21325;Dbxref=GenBank:WP_063148471.1;Name=WP_063148471.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229071.1;locus_tag=VMS06_RS21325;product=cell division protein ZapE;protein_id=WP_063148471.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 1432 1830 . + . ID=gene-VMS06_RS21330;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=VMS06_RS21330 NZ_JAVXZI010000025.1 Protein Homology CDS 1432 1830 . + 0 ID=cds-WP_022649554.1;Parent=gene-VMS06_RS21330;Dbxref=GenBank:WP_022649554.1;Name=WP_022649554.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121352.1;locus_tag=VMS06_RS21330;product=Z-ring associated protein ZapG;protein_id=WP_022649554.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 2002 3369 . + . ID=gene-VMS06_RS21335;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=VMS06_RS21335 NZ_JAVXZI010000025.1 Protein Homology CDS 2002 3369 . + 0 ID=cds-WP_022649555.1;Parent=gene-VMS06_RS21335;Dbxref=GenBank:WP_022649555.1;Name=WP_022649555.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462258.1;locus_tag=VMS06_RS21335;product=serine endoprotease DegQ;protein_id=WP_022649555.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 3462 4529 . + . ID=gene-VMS06_RS21340;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=VMS06_RS21340 NZ_JAVXZI010000025.1 Protein Homology CDS 3462 4529 . + 0 ID=cds-WP_003860430.1;Parent=gene-VMS06_RS21340;Dbxref=GenBank:WP_003860430.1;Name=WP_003860430.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312135.1;locus_tag=VMS06_RS21340;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_003860430.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 4581 5519 . - . ID=gene-VMS06_RS21345;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=VMS06_RS21345 NZ_JAVXZI010000025.1 Protein Homology CDS 4581 5519 . - 0 ID=cds-WP_063148470.1;Parent=gene-VMS06_RS21345;Dbxref=GenBank:WP_063148470.1;Name=WP_063148470.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=VMS06_RS21345;product=malate dehydrogenase;protein_id=WP_063148470.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 5917 6387 . + . ID=gene-VMS06_RS21350;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=VMS06_RS21350 NZ_JAVXZI010000025.1 Protein Homology CDS 5917 6387 . + 0 ID=cds-WP_003860428.1;Parent=gene-VMS06_RS21350;Dbxref=GenBank:WP_003860428.1;Name=WP_003860428.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001257852.1;locus_tag=VMS06_RS21350;product=transcriptional regulator ArgR;protein_id=WP_003860428.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 6766 7029 . + . ID=gene-VMS06_RS21355;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=VMS06_RS21355 NZ_JAVXZI010000025.1 Protein Homology CDS 6766 7029 . + 0 ID=cds-WP_063148469.1;Parent=gene-VMS06_RS21355;Dbxref=GenBank:WP_063148469.1;Name=WP_063148469.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229077.1;locus_tag=VMS06_RS21355;product=peroxide/acid stress response protein YhcN;protein_id=WP_063148469.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 7089 7361 . - . ID=gene-VMS06_RS21360;Name=VMS06_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21360 NZ_JAVXZI010000025.1 Protein Homology CDS 7089 7361 . - 0 ID=cds-WP_022649557.1;Parent=gene-VMS06_RS21360;Dbxref=GenBank:WP_022649557.1;Name=WP_022649557.1;Ontology_term=GO:0046983;gbkey=CDS;go_function=protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860424.1;locus_tag=VMS06_RS21360;product=barstar family protein;protein_id=WP_022649557.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 7407 8861 . - . ID=gene-VMS06_RS21365;Name=VMS06_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21365 NZ_JAVXZI010000025.1 Protein Homology CDS 7407 8861 . - 0 ID=cds-WP_063148468.1;Parent=gene-VMS06_RS21365;Dbxref=GenBank:WP_063148468.1;Name=WP_063148468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017693898.1;locus_tag=VMS06_RS21365;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_063148468.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 8948 10915 . - . ID=gene-VMS06_RS21370;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=VMS06_RS21370 NZ_JAVXZI010000025.1 Protein Homology CDS 8948 10915 . - 0 ID=cds-WP_023298739.1;Parent=gene-VMS06_RS21370;Dbxref=GenBank:WP_023298739.1;Name=WP_023298739.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462274.1;locus_tag=VMS06_RS21370;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_023298739.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 10921 11853 . - . ID=gene-VMS06_RS21375;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=VMS06_RS21375 NZ_JAVXZI010000025.1 Protein Homology CDS 10921 11853 . - 0 ID=cds-WP_023298740.1;Parent=gene-VMS06_RS21375;Dbxref=GenBank:WP_023298740.1;Name=WP_023298740.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462275.1;locus_tag=VMS06_RS21375;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_023298740.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 11861 12064 . - . ID=gene-VMS06_RS21380;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=VMS06_RS21380 NZ_JAVXZI010000025.1 Protein Homology CDS 11861 12064 . - 0 ID=cds-WP_003860416.1;Parent=gene-VMS06_RS21380;Dbxref=GenBank:WP_003860416.1;Name=WP_003860416.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=VMS06_RS21380;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_003860416.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 12243 13169 . + . ID=gene-VMS06_RS21385;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=VMS06_RS21385 NZ_JAVXZI010000025.1 Protein Homology CDS 12243 13169 . + 0 ID=cds-WP_022649561.1;Parent=gene-VMS06_RS21385;Dbxref=GenBank:WP_022649561.1;Name=WP_022649561.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833486.1;locus_tag=VMS06_RS21385;product=HTH-type transcriptional activator AaeR;protein_id=WP_022649561.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 13329 14774 . - . ID=gene-VMS06_RS21390;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=VMS06_RS21390 NZ_JAVXZI010000025.1 Protein Homology CDS 13329 14774 . - 0 ID=cds-WP_022649562.1;Parent=gene-VMS06_RS21390;Dbxref=GenBank:WP_022649562.1;Name=WP_022649562.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=VMS06_RS21390;product=metalloprotease TldD;protein_id=WP_022649562.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 14858 18664 . - . ID=gene-VMS06_RS21395;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=VMS06_RS21395 NZ_JAVXZI010000025.1 Protein Homology CDS 14858 18664 . - 0 ID=cds-WP_048966787.1;Parent=gene-VMS06_RS21395;Dbxref=GenBank:WP_048966787.1;Name=WP_048966787.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462279.1;locus_tag=VMS06_RS21395;product=AsmA2 domain-containing protein YhdP;protein_id=WP_048966787.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 18707 20176 . - . ID=gene-VMS06_RS21400;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=VMS06_RS21400 NZ_JAVXZI010000025.1 Protein Homology CDS 18707 20176 . - 0 ID=cds-WP_003860405.1;Parent=gene-VMS06_RS21400;Dbxref=GenBank:WP_003860405.1;Name=WP_003860405.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=VMS06_RS21400;product=ribonuclease G;protein_id=WP_003860405.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 20166 20759 . - . ID=gene-VMS06_RS21405;Name=VMS06_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21405 NZ_JAVXZI010000025.1 Protein Homology CDS 20166 20759 . - 0 ID=cds-WP_003860403.1;Parent=gene-VMS06_RS21405;Dbxref=GenBank:WP_003860403.1;Name=WP_003860403.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709043.1;locus_tag=VMS06_RS21405;product=Maf family protein;protein_id=WP_003860403.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 20769 21257 . - . ID=gene-VMS06_RS21410;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=VMS06_RS21410 NZ_JAVXZI010000025.1 Protein Homology CDS 20769 21257 . - 0 ID=cds-WP_003860402.1;Parent=gene-VMS06_RS21410;Dbxref=GenBank:WP_003860402.1;Name=WP_003860402.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=VMS06_RS21410;product=rod shape-determining protein MreD;protein_id=WP_003860402.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 21257 22273 . - . ID=gene-VMS06_RS21415;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=VMS06_RS21415 NZ_JAVXZI010000025.1 Protein Homology CDS 21257 22273 . - 0 ID=cds-WP_003860400.1;Parent=gene-VMS06_RS21415;Dbxref=GenBank:WP_003860400.1;Name=WP_003860400.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502850.1;locus_tag=VMS06_RS21415;product=rod shape-determining protein MreC;protein_id=WP_003860400.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 22336 23379 . - . ID=gene-VMS06_RS21420;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=VMS06_RS21420 NZ_JAVXZI010000025.1 Protein Homology CDS 22336 23379 . - 0 ID=cds-WP_000913396.1;Parent=gene-VMS06_RS21420;Dbxref=GenBank:WP_000913396.1;Name=WP_000913396.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=VMS06_RS21420;product=rod shape-determining protein MreB;protein_id=WP_000913396.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 23662 25602 . - . ID=gene-VMS06_RS21425;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=VMS06_RS21425 NZ_JAVXZI010000025.1 Protein Homology CDS 23662 25602 . - 0 ID=cds-WP_022649564.1;Parent=gene-VMS06_RS21425;Dbxref=GenBank:WP_022649564.1;Name=WP_022649564.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462285.1;locus_tag=VMS06_RS21425;product=RNase E specificity factor CsrD;protein_id=WP_022649564.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 25786 26760 . + . ID=gene-VMS06_RS21430;Name=acuI;gbkey=Gene;gene=acuI;gene_biotype=protein_coding;locus_tag=VMS06_RS21430 NZ_JAVXZI010000025.1 Protein Homology CDS 25786 26760 . + 0 ID=cds-WP_063148467.1;Parent=gene-VMS06_RS21430;Dbxref=GenBank:WP_063148467.1;Name=WP_063148467.1;gbkey=CDS;gene=acuI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106258.1;locus_tag=VMS06_RS21430;product=acrylyl-CoA reductase (NADPH);protein_id=WP_063148467.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 26838 27839 . + . ID=gene-VMS06_RS21435;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=VMS06_RS21435 NZ_JAVXZI010000025.1 Protein Homology CDS 26838 27839 . + 0 ID=cds-WP_032626457.1;Parent=gene-VMS06_RS21435;Dbxref=GenBank:WP_032626457.1;Name=WP_032626457.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229093.1;locus_tag=VMS06_RS21435;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_032626457.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 27840 28439 . + . ID=gene-VMS06_RS21440;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=VMS06_RS21440 NZ_JAVXZI010000025.1 Protein Homology CDS 27840 28439 . + 0 ID=cds-WP_022649567.1;Parent=gene-VMS06_RS21440;Dbxref=GenBank:WP_022649567.1;Name=WP_022649567.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462288.1;locus_tag=VMS06_RS21440;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_022649567.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 28674 29126 . + . ID=gene-VMS06_RS21445;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=VMS06_RS21445 NZ_JAVXZI010000025.1 Protein Homology CDS 28674 29126 . + 0 ID=cds-WP_022649568.1;Parent=gene-VMS06_RS21445;Dbxref=GenBank:WP_022649568.1;Name=WP_022649568.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229095.1;locus_tag=VMS06_RS21445;product=type II 3-dehydroquinate dehydratase;protein_id=WP_022649568.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 29148 29609 . + . ID=gene-VMS06_RS21450;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=VMS06_RS21450 NZ_JAVXZI010000025.1 Protein Homology CDS 29148 29609 . + 0 ID=cds-WP_010436174.1;Parent=gene-VMS06_RS21450;Dbxref=GenBank:WP_010436174.1;Name=WP_010436174.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312154.1;locus_tag=VMS06_RS21450;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_010436174.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 29620 30969 . + . ID=gene-VMS06_RS21455;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=VMS06_RS21455 NZ_JAVXZI010000025.1 Protein Homology CDS 29620 30969 . + 0 ID=cds-WP_003860388.1;Parent=gene-VMS06_RS21455;Dbxref=GenBank:WP_003860388.1;Name=WP_003860388.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=VMS06_RS21455;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_003860388.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 31078 31320 . + . ID=gene-VMS06_RS21460;Name=VMS06_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21460 NZ_JAVXZI010000025.1 Protein Homology CDS 31078 31320 . + 0 ID=cds-WP_022649569.1;Parent=gene-VMS06_RS21460;Dbxref=GenBank:WP_022649569.1;Name=WP_022649569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462291.1;locus_tag=VMS06_RS21460;product=YhdT family protein;protein_id=WP_022649569.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 31310 32761 . + . ID=gene-VMS06_RS21465;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=VMS06_RS21465 NZ_JAVXZI010000025.1 Protein Homology CDS 31310 32761 . + 0 ID=cds-WP_022649570.1;Parent=gene-VMS06_RS21465;Dbxref=GenBank:WP_022649570.1;Name=WP_022649570.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312157.2;locus_tag=VMS06_RS21465;product=sodium/pantothenate symporter;protein_id=WP_022649570.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 32773 33654 . + . ID=gene-VMS06_RS21470;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=VMS06_RS21470 NZ_JAVXZI010000025.1 Protein Homology CDS 32773 33654 . + 0 ID=cds-WP_022649571.1;Parent=gene-VMS06_RS21470;Dbxref=GenBank:WP_022649571.1;Name=WP_022649571.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462293.1;locus_tag=VMS06_RS21470;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_022649571.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 33793 34533 . + . ID=gene-VMS06_RS21475;Name=VMS06_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21475 NZ_JAVXZI010000025.1 Protein Homology CDS 33793 34533 . + 0 ID=cds-WP_063148466.1;Parent=gene-VMS06_RS21475;Dbxref=GenBank:WP_063148466.1;Name=WP_063148466.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115924.1;locus_tag=VMS06_RS21475;product=carbonic anhydrase;protein_id=WP_063148466.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 34863 35828 . + . ID=gene-VMS06_RS21480;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=VMS06_RS21480 NZ_JAVXZI010000025.1 Protein Homology CDS 34863 35828 . + 0 ID=cds-WP_063843940.1;Parent=gene-VMS06_RS21480;Dbxref=GenBank:WP_063843940.1;Name=WP_063843940.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785970.1;locus_tag=VMS06_RS21480;product=tRNA dihydrouridine synthase DusB;protein_id=WP_063843940.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 35852 36148 . + . ID=gene-VMS06_RS21485;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=VMS06_RS21485 NZ_JAVXZI010000025.1 Protein Homology CDS 35852 36148 . + 0 ID=cds-WP_000462905.1;Parent=gene-VMS06_RS21485;Dbxref=GenBank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=VMS06_RS21485;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 36327 36491 . + . ID=gene-VMS06_RS21490;Name=VMS06_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21490 NZ_JAVXZI010000025.1 Protein Homology CDS 36327 36491 . + 0 ID=cds-WP_003860373.1;Parent=gene-VMS06_RS21490;Dbxref=GenBank:WP_003860373.1;Name=WP_003860373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462297.1;locus_tag=VMS06_RS21490;product=DUF2556 family protein;protein_id=WP_003860373.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 36631 38715 . + . ID=gene-VMS06_RS21495;Name=VMS06_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21495 NZ_JAVXZI010000025.1 Protein Homology CDS 36631 38715 . + 0 ID=cds-WP_063148464.1;Parent=gene-VMS06_RS21495;Dbxref=GenBank:WP_063148464.1;Name=WP_063148464.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572024.1;locus_tag=VMS06_RS21495;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_063148464.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 38710 39357 . - . ID=gene-VMS06_RS21500;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=VMS06_RS21500 NZ_JAVXZI010000025.1 Protein Homology CDS 38710 39357 . - 0 ID=cds-WP_022649574.1;Parent=gene-VMS06_RS21500;Dbxref=GenBank:WP_022649574.1;Name=WP_022649574.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812179.1;locus_tag=VMS06_RS21500;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_022649574.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 39754 40893 . + . ID=gene-VMS06_RS21505;Name=VMS06_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21505 NZ_JAVXZI010000025.1 Protein Homology CDS 39754 40893 . + 0 ID=cds-WP_022649575.1;Parent=gene-VMS06_RS21505;Dbxref=GenBank:WP_022649575.1;Name=WP_022649575.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015572026.1;locus_tag=VMS06_RS21505;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_022649575.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 40905 44018 . + . ID=gene-VMS06_RS21510;Name=VMS06_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21510 NZ_JAVXZI010000025.1 Protein Homology CDS 40905 44018 . + 0 ID=cds-WP_063148463.1;Parent=gene-VMS06_RS21510;Dbxref=GenBank:WP_063148463.1;Name=WP_063148463.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687791.1;locus_tag=VMS06_RS21510;product=efflux RND transporter permease subunit;protein_id=WP_063148463.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 44266 44487 . + . ID=gene-VMS06_RS21515;Name=VMS06_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21515 NZ_JAVXZI010000025.1 Protein Homology CDS 44266 44487 . + 0 ID=cds-WP_003860364.1;Parent=gene-VMS06_RS21515;Dbxref=GenBank:WP_003860364.1;Name=WP_003860364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312167.1;locus_tag=VMS06_RS21515;product=lipoprotein;protein_id=WP_003860364.1;transl_table=11 NZ_JAVXZI010000025.1 RefSeq gene 44836 44948 . - . ID=gene-VMS06_RS21520;Name=rrf;end_range=44948,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VMS06_RS21520;partial=true NZ_JAVXZI010000025.1 cmsearch rRNA 44836 44948 . - . ID=rna-VMS06_RS21520;Parent=gene-VMS06_RS21520;Dbxref=RFAM:RF00001;end_range=44948,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS21520;partial=true;product=5S ribosomal RNA NZ_JAVXZI010000025.1 cmsearch exon 44836 44948 . - . ID=exon-VMS06_RS21520-1;Parent=rna-VMS06_RS21520;Dbxref=RFAM:RF00001;end_range=44948,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS21520;partial=true;product=5S ribosomal RNA ##sequence-region NZ_JAVXZI010000026.1 1 33154 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000026.1 RefSeq region 1 33154 . + . ID=NZ_JAVXZI010000026.1:1..33154;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000026.1 RefSeq gene 435 926 . + . ID=gene-VMS06_RS21525;Name=VMS06_RS21525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21525 NZ_JAVXZI010000026.1 GeneMarkS-2+ CDS 435 926 . + 0 ID=cds-WP_129256530.1;Parent=gene-VMS06_RS21525;Dbxref=GenBank:WP_129256530.1;Name=WP_129256530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS21525;product=hypothetical protein;protein_id=WP_129256530.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 933 1496 . + . ID=gene-VMS06_RS21530;Name=VMS06_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21530 NZ_JAVXZI010000026.1 GeneMarkS-2+ CDS 933 1496 . + 0 ID=cds-WP_129256531.1;Parent=gene-VMS06_RS21530;Dbxref=GenBank:WP_129256531.1;Name=WP_129256531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS21530;product=hypothetical protein;protein_id=WP_129256531.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 1745 2431 . - . ID=gene-VMS06_RS21535;Name=VMS06_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21535 NZ_JAVXZI010000026.1 Protein Homology CDS 1745 2431 . - 0 ID=cds-WP_180240150.1;Parent=gene-VMS06_RS21535;Dbxref=GenBank:WP_180240150.1;Name=WP_180240150.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016066203.1;locus_tag=VMS06_RS21535;product=replication protein P;protein_id=WP_180240150.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 2428 3345 . - . ID=gene-VMS06_RS21540;Name=VMS06_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21540 NZ_JAVXZI010000026.1 Protein Homology CDS 2428 3345 . - 0 ID=cds-WP_180240151.1;Parent=gene-VMS06_RS21540;Dbxref=GenBank:WP_180240151.1;Name=WP_180240151.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004103045.1;locus_tag=VMS06_RS21540;product=replication protein;protein_id=WP_180240151.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 3430 3981 . - . ID=gene-VMS06_RS21545;Name=VMS06_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21545 NZ_JAVXZI010000026.1 Protein Homology CDS 3430 3981 . - 0 ID=cds-WP_180240152.1;Parent=gene-VMS06_RS21545;Dbxref=GenBank:WP_180240152.1;Name=WP_180240152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170305.1;locus_tag=VMS06_RS21545;product=toxin YdaT family protein;protein_id=WP_180240152.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 3984 4211 . - . ID=gene-VMS06_RS21550;Name=VMS06_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21550 NZ_JAVXZI010000026.1 Protein Homology CDS 3984 4211 . - 0 ID=cds-WP_047054793.1;Parent=gene-VMS06_RS21550;Dbxref=GenBank:WP_047054793.1;Name=WP_047054793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946294.1;locus_tag=VMS06_RS21550;product=transcriptional regulator;protein_id=WP_047054793.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 4313 4705 . + . ID=gene-VMS06_RS21555;Name=VMS06_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21555 NZ_JAVXZI010000026.1 Protein Homology CDS 4313 4705 . + 0 ID=cds-WP_180240153.1;Parent=gene-VMS06_RS21555;Dbxref=GenBank:WP_180240153.1;Name=WP_180240153.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946293.1;locus_tag=VMS06_RS21555;product=helix-turn-helix domain-containing protein;protein_id=WP_180240153.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 4892 6499 . + . ID=gene-VMS06_RS21560;Name=VMS06_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21560 NZ_JAVXZI010000026.1 Protein Homology CDS 4892 6499 . + 0 ID=cds-WP_180240154.1;Parent=gene-VMS06_RS21560;Dbxref=GenBank:WP_180240154.1;Name=WP_180240154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015964722.1;locus_tag=VMS06_RS21560;product=SIR2 family protein;protein_id=WP_180240154.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 7092 7595 . - . ID=gene-VMS06_RS21565;Name=VMS06_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21565 NZ_JAVXZI010000026.1 Protein Homology CDS 7092 7595 . - 0 ID=cds-WP_072015910.1;Parent=gene-VMS06_RS21565;Dbxref=GenBank:WP_072015910.1;Name=WP_072015910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000559919.1;locus_tag=VMS06_RS21565;product=hypothetical protein;protein_id=WP_072015910.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq pseudogene 7720 7830 . + . ID=gene-VMS06_RS22920;Name=VMS06_RS22920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22920;partial=true;pseudo=true;start_range=.,7720 NZ_JAVXZI010000026.1 Protein Homology CDS 7720 7830 . + 0 ID=cds-VMS06_RS22920;Parent=gene-VMS06_RS22920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461564.1;locus_tag=VMS06_RS22920;partial=true;product=hypothetical protein;pseudo=true;start_range=.,7720;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 7823 7987 . + . ID=gene-VMS06_RS21570;Name=VMS06_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21570 NZ_JAVXZI010000026.1 Protein Homology CDS 7823 7987 . + 0 ID=cds-WP_180240155.1;Parent=gene-VMS06_RS21570;Dbxref=GenBank:WP_180240155.1;Name=WP_180240155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170307.1;locus_tag=VMS06_RS21570;product=YdaE family protein;protein_id=WP_180240155.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 8129 8812 . + . ID=gene-VMS06_RS22925;Name=VMS06_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22925 NZ_JAVXZI010000026.1 Protein Homology CDS 8129 8812 . + 0 ID=cds-WP_420536423.1;Parent=gene-VMS06_RS22925;Dbxref=GenBank:WP_420536423.1;Name=WP_420536423.1;Ontology_term=GO:0090304,GO:0051908;gbkey=CDS;go_function=double-stranded DNA 5'-3' DNA exonuclease activity|0051908||IEA;go_process=nucleic acid metabolic process|0090304||IEA;inference=COORDINATES: protein motif:HMM:NF018353.7;locus_tag=VMS06_RS22925;product=RecE family exodeoxyribonuclease;protein_id=WP_420536423.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 8951 11290 . + . ID=gene-VMS06_RS21575;Name=VMS06_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21575 NZ_JAVXZI010000026.1 Protein Homology CDS 8951 11290 . + 0 ID=cds-WP_420536424.1;Parent=gene-VMS06_RS21575;Dbxref=GenBank:WP_420536424.1;Name=WP_420536424.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832194.1;locus_tag=VMS06_RS21575;product=exonuclease family protein;protein_id=WP_420536424.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 11300 12385 . + . ID=gene-VMS06_RS21580;Name=VMS06_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21580 NZ_JAVXZI010000026.1 Protein Homology CDS 11300 12385 . + 0 ID=cds-WP_180240157.1;Parent=gene-VMS06_RS21580;Dbxref=GenBank:WP_180240157.1;Name=WP_180240157.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014832195.1;locus_tag=VMS06_RS21580;product=RecT family recombinase;protein_id=WP_180240157.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 12420 12776 . + . ID=gene-VMS06_RS21585;Name=VMS06_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21585 NZ_JAVXZI010000026.1 Protein Homology CDS 12420 12776 . + 0 ID=cds-WP_063162867.1;Parent=gene-VMS06_RS21585;Dbxref=GenBank:WP_063162867.1;Name=WP_063162867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003826128.1;locus_tag=VMS06_RS21585;product=hypothetical protein;protein_id=WP_063162867.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 12769 13341 . + . ID=gene-VMS06_RS21590;Name=VMS06_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21590 NZ_JAVXZI010000026.1 Protein Homology CDS 12769 13341 . + 0 ID=cds-WP_370326980.1;Parent=gene-VMS06_RS21590;Dbxref=GenBank:WP_370326980.1;Name=WP_370326980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692870.1;locus_tag=VMS06_RS21590;product=hypothetical protein;protein_id=WP_370326980.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 13401 13643 . + . ID=gene-VMS06_RS21595;Name=VMS06_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21595 NZ_JAVXZI010000026.1 Protein Homology CDS 13401 13643 . + 0 ID=cds-WP_129256533.1;Parent=gene-VMS06_RS21595;Dbxref=GenBank:WP_129256533.1;Name=WP_129256533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247081.1;locus_tag=VMS06_RS21595;product=DUF4060 family protein;protein_id=WP_129256533.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 13690 13974 . + . ID=gene-VMS06_RS21600;Name=xis;gbkey=Gene;gene=xis;gene_biotype=protein_coding;locus_tag=VMS06_RS21600 NZ_JAVXZI010000026.1 Protein Homology CDS 13690 13974 . + 0 ID=cds-WP_022651668.1;Parent=gene-VMS06_RS21600;Dbxref=GenBank:WP_022651668.1;Name=WP_022651668.1;gbkey=CDS;gene=xis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014344516.1;locus_tag=VMS06_RS21600;product=excisionase Xis;protein_id=WP_022651668.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 13952 15181 . - . ID=gene-VMS06_RS21605;Name=VMS06_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21605 NZ_JAVXZI010000026.1 Protein Homology CDS 13952 15181 . - 0 ID=cds-WP_180240158.1;Parent=gene-VMS06_RS21605;Dbxref=GenBank:WP_180240158.1;Name=WP_180240158.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461571.1;locus_tag=VMS06_RS21605;product=tyrosine-type recombinase/integrase;protein_id=WP_180240158.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 15613 16089 . - . ID=gene-VMS06_RS21610;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=VMS06_RS21610 NZ_JAVXZI010000026.1 Protein Homology CDS 15613 16089 . - 0 ID=cds-WP_022649042.1;Parent=gene-VMS06_RS21610;Dbxref=GenBank:WP_022649042.1;Name=WP_022649042.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883002.1;locus_tag=VMS06_RS21610;product=SoxR-reducing system protein RseC;protein_id=WP_022649042.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 16086 17039 . - . ID=gene-VMS06_RS21615;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=VMS06_RS21615 NZ_JAVXZI010000026.1 Protein Homology CDS 16086 17039 . - 0 ID=cds-WP_022649043.1;Parent=gene-VMS06_RS21615;Dbxref=GenBank:WP_022649043.1;Name=WP_022649043.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860717.1;locus_tag=VMS06_RS21615;product=sigma-E factor regulatory protein RseB;protein_id=WP_022649043.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 17039 17689 . - . ID=gene-VMS06_RS21620;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=VMS06_RS21620 NZ_JAVXZI010000026.1 Protein Homology CDS 17039 17689 . - 0 ID=cds-WP_022649044.1;Parent=gene-VMS06_RS21620;Dbxref=GenBank:WP_022649044.1;Name=WP_022649044.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461574.1;locus_tag=VMS06_RS21620;product=anti-sigma-E factor RseA;protein_id=WP_022649044.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 17721 18296 . - . ID=gene-VMS06_RS21625;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=VMS06_RS21625 NZ_JAVXZI010000026.1 Protein Homology CDS 17721 18296 . - 0 ID=cds-WP_006176728.1;Parent=gene-VMS06_RS21625;Dbxref=GenBank:WP_006176728.1;Name=WP_006176728.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=VMS06_RS21625;product=RNA polymerase sigma factor RpoE;protein_id=WP_006176728.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 18722 20341 . + . ID=gene-VMS06_RS21630;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=VMS06_RS21630 NZ_JAVXZI010000026.1 Protein Homology CDS 18722 20341 . + 0 ID=cds-WP_063148278.1;Parent=gene-VMS06_RS21630;Dbxref=GenBank:WP_063148278.1;Name=WP_063148278.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311467.1;locus_tag=VMS06_RS21630;product=L-aspartate oxidase;protein_id=WP_063148278.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 20326 21063 . - . ID=gene-VMS06_RS21635;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=VMS06_RS21635 NZ_JAVXZI010000026.1 Protein Homology CDS 20326 21063 . - 0 ID=cds-WP_022649046.1;Parent=gene-VMS06_RS21635;Dbxref=GenBank:WP_022649046.1;Name=WP_022649046.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240196.1;locus_tag=VMS06_RS21635;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_022649046.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 21196 22524 . + . ID=gene-VMS06_RS21640;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=VMS06_RS21640 NZ_JAVXZI010000026.1 Protein Homology CDS 21196 22524 . + 0 ID=cds-WP_022649047.1;Parent=gene-VMS06_RS21640;Dbxref=GenBank:WP_022649047.1;Name=WP_022649047.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171223.1;locus_tag=VMS06_RS21640;product=ATP-dependent RNA helicase SrmB;protein_id=WP_022649047.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 22576 22959 . - . ID=gene-VMS06_RS21645;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=VMS06_RS21645 NZ_JAVXZI010000026.1 Protein Homology CDS 22576 22959 . - 0 ID=cds-WP_022649048.1;Parent=gene-VMS06_RS21645;Dbxref=GenBank:WP_022649048.1;Name=WP_022649048.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=VMS06_RS21645;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_022649048.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 23274 23963 . + . ID=gene-VMS06_RS21650;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=VMS06_RS21650 NZ_JAVXZI010000026.1 Protein Homology CDS 23274 23963 . + 0 ID=cds-WP_003860729.1;Parent=gene-VMS06_RS21650;Dbxref=GenBank:WP_003860729.1;Name=WP_003860729.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417075.1;locus_tag=VMS06_RS21650;product=uracil-DNA glycosylase;protein_id=WP_003860729.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 24003 25088 . - . ID=gene-VMS06_RS21655;Name=VMS06_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21655 NZ_JAVXZI010000026.1 Protein Homology CDS 24003 25088 . - 0 ID=cds-WP_023300740.1;Parent=gene-VMS06_RS21655;Dbxref=GenBank:WP_023300740.1;Name=WP_023300740.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228276.1;locus_tag=VMS06_RS21655;product=tRNA/rRNA methyltransferase;protein_id=WP_023300740.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 25293 25712 . + . ID=gene-VMS06_RS21660;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=VMS06_RS21660 NZ_JAVXZI010000026.1 Protein Homology CDS 25293 25712 . + 0 ID=cds-WP_003860733.1;Parent=gene-VMS06_RS21660;Dbxref=GenBank:WP_003860733.1;Name=WP_003860733.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461584.1;locus_tag=VMS06_RS21660;product=thioredoxin TrxC;protein_id=WP_003860733.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 25783 26481 . + . ID=gene-VMS06_RS21665;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=VMS06_RS21665 NZ_JAVXZI010000026.1 Protein Homology CDS 25783 26481 . + 0 ID=cds-WP_063148276.1;Parent=gene-VMS06_RS21665;Dbxref=GenBank:WP_063148276.1;Name=WP_063148276.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228278.1;locus_tag=VMS06_RS21665;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_063148276.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 26517 29180 . + . ID=gene-VMS06_RS21670;Name=VMS06_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21670 NZ_JAVXZI010000026.1 Protein Homology CDS 26517 29180 . + 0 ID=cds-WP_063148275.1;Parent=gene-VMS06_RS21670;Dbxref=GenBank:WP_063148275.1;Name=WP_063148275.1;Ontology_term=GO:0046356,GO:0003985,GO:0005524,GO:0008080,GO:0043758;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA,ATP binding|0005524||IEA,N-acetyltransferase activity|0008080||IEA,acetate-CoA ligase (ADP-forming) activity|0043758||IEA;go_process=acetyl-CoA catabolic process|0046356||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010434099.1;locus_tag=VMS06_RS21670;product=bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase;protein_id=WP_063148275.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 29290 30645 . + . ID=gene-VMS06_RS21680;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=VMS06_RS21680 NZ_JAVXZI010000026.1 Protein Homology CDS 29290 30645 . + 0 ID=cds-WP_023306731.1;Parent=gene-VMS06_RS21680;Dbxref=GenBank:WP_023306731.1;Name=WP_023306731.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=VMS06_RS21680;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_023306731.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 30691 31014 . + . ID=gene-VMS06_RS21685;Name=VMS06_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21685 NZ_JAVXZI010000026.1 Protein Homology CDS 30691 31014 . + 0 ID=cds-WP_022649053.1;Parent=gene-VMS06_RS21685;Dbxref=GenBank:WP_022649053.1;Name=WP_022649053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811621.1;locus_tag=VMS06_RS21685;product=YfiM family lipoprotein;protein_id=WP_022649053.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 31011 32318 . - . ID=gene-VMS06_RS21690;Name=VMS06_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21690 NZ_JAVXZI010000026.1 Protein Homology CDS 31011 32318 . - 0 ID=cds-WP_038416531.1;Parent=gene-VMS06_RS21690;Dbxref=GenBank:WP_038416531.1;Name=WP_038416531.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383558.1;locus_tag=VMS06_RS21690;product=MFS transporter;protein_id=WP_038416531.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 32470 32922 . - . ID=gene-VMS06_RS21695;Name=VMS06_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21695 NZ_JAVXZI010000026.1 Protein Homology CDS 32470 32922 . - 0 ID=cds-WP_032622345.1;Parent=gene-VMS06_RS21695;Dbxref=GenBank:WP_032622345.1;Name=WP_032622345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017692863.1;locus_tag=VMS06_RS21695;product=DUF4385 domain-containing protein;protein_id=WP_032622345.1;transl_table=11 NZ_JAVXZI010000026.1 RefSeq gene 33052 33154 . - . ID=gene-VMS06_RS21700;Name=rrf;end_range=33154,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VMS06_RS21700;partial=true NZ_JAVXZI010000026.1 cmsearch rRNA 33052 33154 . - . ID=rna-VMS06_RS21700;Parent=gene-VMS06_RS21700;Dbxref=RFAM:RF00001;end_range=33154,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS21700;partial=true;product=5S ribosomal RNA NZ_JAVXZI010000026.1 cmsearch exon 33052 33154 . - . ID=exon-VMS06_RS21700-1;Parent=rna-VMS06_RS21700;Dbxref=RFAM:RF00001;end_range=33154,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS21700;partial=true;product=5S ribosomal RNA ##sequence-region NZ_JAVXZI010000027.1 1 31426 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000027.1 RefSeq region 1 31426 . + . ID=NZ_JAVXZI010000027.1:1..31426;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000027.1 RefSeq gene 157 1137 . - . ID=gene-VMS06_RS21705;Name=VMS06_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21705 NZ_JAVXZI010000027.1 Protein Homology CDS 157 1137 . - 0 ID=cds-WP_000019450.1;Parent=gene-VMS06_RS21705;Dbxref=GenBank:WP_000019450.1;Name=WP_000019450.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=VMS06_RS21705;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019450.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq pseudogene 1200 1661 . + . ID=gene-VMS06_RS21710;Name=VMS06_RS21710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS21710;partial=true;pseudo=true;start_range=.,1200 NZ_JAVXZI010000027.1 Protein Homology CDS 1200 1661 . + 0 ID=cds-VMS06_RS21710;Parent=gene-VMS06_RS21710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016149750.1;locus_tag=VMS06_RS21710;partial=true;product=EAL domain-containing protein;pseudo=true;start_range=.,1200;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 1814 9034 . - . ID=gene-VMS06_RS21715;Name=VMS06_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21715 NZ_JAVXZI010000027.1 Protein Homology CDS 1814 9034 . - 0 ID=cds-WP_241698186.1;Parent=gene-VMS06_RS21715;Dbxref=GenBank:WP_241698186.1;Name=WP_241698186.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019076224.1;locus_tag=VMS06_RS21715;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_241698186.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 9148 10128 . - . ID=gene-VMS06_RS21720;Name=VMS06_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21720 NZ_JAVXZI010000027.1 Protein Homology CDS 9148 10128 . - 0 ID=cds-WP_000019450.1-2;Parent=gene-VMS06_RS21720;Dbxref=GenBank:WP_000019450.1;Name=WP_000019450.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000019445.1;locus_tag=VMS06_RS21720;product=IS5-like element ISKpn26 family transposase;protein_id=WP_000019450.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 10169 11461 . - . ID=gene-VMS06_RS21725;Name=VMS06_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21725 NZ_JAVXZI010000027.1 Protein Homology CDS 10169 11461 . - 0 ID=cds-WP_023304011.1;Parent=gene-VMS06_RS21725;Dbxref=GenBank:WP_023304011.1;Name=WP_023304011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016239947.1;locus_tag=VMS06_RS21725;product=DUF2254 domain-containing protein;protein_id=WP_023304011.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 11525 13522 . - . ID=gene-VMS06_RS21730;Name=VMS06_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21730 NZ_JAVXZI010000027.1 Protein Homology CDS 11525 13522 . - 0 ID=cds-WP_023304012.1;Parent=gene-VMS06_RS21730;Dbxref=GenBank:WP_023304012.1;Name=WP_023304012.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004119118.1;locus_tag=VMS06_RS21730;product=BCCT family transporter;protein_id=WP_023304012.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 13951 14648 . + . ID=gene-VMS06_RS21735;Name=VMS06_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21735 NZ_JAVXZI010000027.1 Protein Homology CDS 13951 14200 . + 0 ID=cds-WP_226683650.1;Parent=gene-VMS06_RS21735;Dbxref=GenBank:WP_226683650.1;Name=WP_226683650.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=VMS06_RS21735;product=IS1 family transposase;protein_id=WP_226683650.1;transl_table=11 NZ_JAVXZI010000027.1 Protein Homology CDS 14200 14648 . + 2 ID=cds-WP_226683650.1;Parent=gene-VMS06_RS21735;Dbxref=GenBank:WP_226683650.1;Name=WP_226683650.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558267.1;locus_tag=VMS06_RS21735;product=IS1 family transposase;protein_id=WP_226683650.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq pseudogene 14645 15244 . - . ID=gene-VMS06_RS21740;Name=VMS06_RS21740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS21740;partial=true;pseudo=true;start_range=.,14645 NZ_JAVXZI010000027.1 Protein Homology CDS 14645 15244 . - 0 ID=cds-VMS06_RS21740;Parent=gene-VMS06_RS21740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484486.1;locus_tag=VMS06_RS21740;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,14645;transl_table=11 NZ_JAVXZI010000027.1 RefSeq pseudogene 15469 15864 . + . ID=gene-VMS06_RS21745;Name=VMS06_RS21745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS21745;partial=true;pseudo=true;start_range=.,15469 NZ_JAVXZI010000027.1 Protein Homology CDS 15469 15864 . + 0 ID=cds-VMS06_RS21745;Parent=gene-VMS06_RS21745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270155.1;locus_tag=VMS06_RS21745;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,15469;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 16089 17240 . - . ID=gene-VMS06_RS21750;Name=VMS06_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21750 NZ_JAVXZI010000027.1 Protein Homology CDS 16089 17240 . - 0 ID=cds-WP_023304016.1;Parent=gene-VMS06_RS21750;Dbxref=GenBank:WP_023304016.1;Name=WP_023304016.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000323730.1;locus_tag=VMS06_RS21750;product=S1C family serine protease;protein_id=WP_023304016.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 17265 18230 . - . ID=gene-VMS06_RS21755;Name=VMS06_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21755 NZ_JAVXZI010000027.1 Protein Homology CDS 17265 18230 . - 0 ID=cds-WP_023304017.1;Parent=gene-VMS06_RS21755;Dbxref=GenBank:WP_023304017.1;Name=WP_023304017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000196690.1;locus_tag=VMS06_RS21755;product=zinc metalloprotease HtpX;protein_id=WP_023304017.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 18208 18705 . - . ID=gene-VMS06_RS21760;Name=psiE-GI;gbkey=Gene;gene=psiE-GI;gene_biotype=protein_coding;locus_tag=VMS06_RS21760 NZ_JAVXZI010000027.1 Protein Homology CDS 18208 18705 . - 0 ID=cds-WP_001514138.1;Parent=gene-VMS06_RS21760;Dbxref=GenBank:WP_001514138.1;Name=WP_001514138.1;gbkey=CDS;gene=psiE-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843382.1;locus_tag=VMS06_RS21760;product=heat resistance protein PsiE-GI;protein_id=WP_001514138.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 18702 20417 . - . ID=gene-VMS06_RS21765;Name=kefB-GI;gbkey=Gene;gene=kefB-GI;gene_biotype=protein_coding;locus_tag=VMS06_RS21765 NZ_JAVXZI010000027.1 Protein Homology CDS 18702 20417 . - 0 ID=cds-WP_023304018.1;Parent=gene-VMS06_RS21765;Dbxref=GenBank:WP_023304018.1;Name=WP_023304018.1;gbkey=CDS;gene=kefB-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016156527.1;locus_tag=VMS06_RS21765;product=heat resistance system K+/H+ antiporter KefB-GI;protein_id=WP_023304018.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 20421 20861 . - . ID=gene-VMS06_RS21770;Name=trx-GI;gbkey=Gene;gene=trx-GI;gene_biotype=protein_coding;locus_tag=VMS06_RS21770 NZ_JAVXZI010000027.1 Protein Homology CDS 20421 20861 . - 0 ID=cds-WP_000786816.1;Parent=gene-VMS06_RS21770;Dbxref=GenBank:WP_000786816.1;Name=WP_000786816.1;gbkey=CDS;gene=trx-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000786816.1;locus_tag=VMS06_RS21770;product=heat resistance system thioredoxin Trx-GI;protein_id=WP_000786816.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 20851 21996 . - . ID=gene-VMS06_RS21775;Name=VMS06_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21775 NZ_JAVXZI010000027.1 Protein Homology CDS 20851 21996 . - 0 ID=cds-WP_023304019.1;Parent=gene-VMS06_RS21775;Dbxref=GenBank:WP_023304019.1;Name=WP_023304019.1;Ontology_term=GO:0016987;gbkey=CDS;go_function=sigma factor activity|0016987||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001166993.1;locus_tag=VMS06_RS21775;product=RNA polymerase sigma factor;protein_id=WP_023304019.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 22076 22687 . - . ID=gene-VMS06_RS21780;Name=hdeD-GI;gbkey=Gene;gene=hdeD-GI;gene_biotype=protein_coding;locus_tag=VMS06_RS21780 NZ_JAVXZI010000027.1 Protein Homology CDS 22076 22687 . - 0 ID=cds-WP_001090779.1;Parent=gene-VMS06_RS21780;Dbxref=GenBank:WP_001090779.1;Name=WP_001090779.1;gbkey=CDS;gene=hdeD-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001090783.1;locus_tag=VMS06_RS21780;product=heat resistance membrane protein HdeD-GI;protein_id=WP_001090779.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 22777 23664 . - . ID=gene-VMS06_RS21785;Name=yfdX2;gbkey=Gene;gene=yfdX2;gene_biotype=protein_coding;locus_tag=VMS06_RS21785 NZ_JAVXZI010000027.1 Protein Homology CDS 22777 23664 . - 0 ID=cds-WP_019077722.1;Parent=gene-VMS06_RS21785;Dbxref=GenBank:WP_019077722.1;Name=WP_019077722.1;gbkey=CDS;gene=yfdX2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001721696.1;locus_tag=VMS06_RS21785;product=heat resistance protein YfdX2;protein_id=WP_019077722.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 23767 24681 . - . ID=gene-VMS06_RS21790;Name=yfdX1;gbkey=Gene;gene=yfdX1;gene_biotype=protein_coding;locus_tag=VMS06_RS21790 NZ_JAVXZI010000027.1 Protein Homology CDS 23767 24681 . - 0 ID=cds-WP_016154559.1;Parent=gene-VMS06_RS21790;Dbxref=GenBank:WP_016154559.1;Name=WP_016154559.1;gbkey=CDS;gene=yfdX1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001022486.1;locus_tag=VMS06_RS21790;product=heat resistance protein YfdX1;protein_id=WP_016154559.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 24704 25162 . - . ID=gene-VMS06_RS21795;Name=hsp20-GI;gbkey=Gene;gene=hsp20-GI;gene_biotype=protein_coding;locus_tag=VMS06_RS21795 NZ_JAVXZI010000027.1 Protein Homology CDS 24704 25162 . - 0 ID=cds-WP_001275372.1;Parent=gene-VMS06_RS21795;Dbxref=GenBank:WP_001275372.1;Name=WP_001275372.1;gbkey=CDS;gene=hsp20-GI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001275372.1;locus_tag=VMS06_RS21795;product=small heat shock protein sHSP20-GI;protein_id=WP_001275372.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 25250 25441 . - . ID=gene-VMS06_RS21800;Name=VMS06_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21800 NZ_JAVXZI010000027.1 Protein Homology CDS 25250 25441 . - 0 ID=cds-WP_004118789.1;Parent=gene-VMS06_RS21800;Dbxref=GenBank:WP_004118789.1;Name=WP_004118789.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013593.7;locus_tag=VMS06_RS21800;product=hypothetical protein;protein_id=WP_004118789.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq pseudogene 25441 26077 . - . ID=gene-VMS06_RS21805;Name=VMS06_RS21805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS21805;partial=true;pseudo=true;start_range=.,25441 NZ_JAVXZI010000027.1 Protein Homology CDS 25441 26077 . - 0 ID=cds-VMS06_RS21805;Parent=gene-VMS06_RS21805;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004176,GO:0004222,GO:0005524,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA,ATP binding|0005524||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000412525.1;locus_tag=VMS06_RS21805;partial=true;product=ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein;pseudo=true;start_range=.,25441;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 26138 26329 . - . ID=gene-VMS06_RS21810;Name=VMS06_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21810 NZ_JAVXZI010000027.1 Protein Homology CDS 26138 26329 . - 0 ID=cds-WP_017146640.1;Parent=gene-VMS06_RS21810;Dbxref=GenBank:WP_017146640.1;Name=WP_017146640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187030.1;locus_tag=VMS06_RS21810;product=hypothetical protein;protein_id=WP_017146640.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 26329 29178 . - . ID=gene-VMS06_RS21815;Name=clpK;gbkey=Gene;gene=clpK;gene_biotype=protein_coding;locus_tag=VMS06_RS21815 NZ_JAVXZI010000027.1 Protein Homology CDS 26329 29178 . - 0 ID=cds-WP_023304020.1;Parent=gene-VMS06_RS21815;Dbxref=GenBank:WP_023304020.1;Name=WP_023304020.1;gbkey=CDS;gene=clpK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000101613.1;locus_tag=VMS06_RS21815;product=heat shock survival AAA family ATPase ClpK;protein_id=WP_023304020.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 29284 29853 . - . ID=gene-VMS06_RS21820;Name=hsp20;gbkey=Gene;gene=hsp20;gene_biotype=protein_coding;locus_tag=VMS06_RS21820 NZ_JAVXZI010000027.1 Protein Homology CDS 29284 29853 . - 0 ID=cds-WP_004118809.1;Parent=gene-VMS06_RS21820;Dbxref=GenBank:WP_004118809.1;Name=WP_004118809.1;gbkey=CDS;gene=hsp20;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003847761.1;locus_tag=VMS06_RS21820;product=small heat shock protein sHSP20;protein_id=WP_004118809.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 29888 30169 . - . ID=gene-VMS06_RS21825;Name=VMS06_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21825 NZ_JAVXZI010000027.1 Protein Homology CDS 29888 30169 . - 0 ID=cds-WP_013307885.1;Parent=gene-VMS06_RS21825;Dbxref=GenBank:WP_013307885.1;Name=WP_013307885.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001568597.1;locus_tag=VMS06_RS21825;product=helix-turn-helix domain-containing protein;protein_id=WP_013307885.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 30392 30655 . - . ID=gene-VMS06_RS21830;Name=VMS06_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21830 NZ_JAVXZI010000027.1 Protein Homology CDS 30392 30655 . - 0 ID=cds-WP_032667972.1;Parent=gene-VMS06_RS21830;Dbxref=GenBank:WP_032667972.1;Name=WP_032667972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017901360.1;locus_tag=VMS06_RS21830;product=hypothetical protein;protein_id=WP_032667972.1;transl_table=11 NZ_JAVXZI010000027.1 RefSeq gene 30815 31426 . + . ID=gene-VMS06_RS21835;Name=VMS06_RS21835;end_range=31426,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21835;partial=true NZ_JAVXZI010000027.1 Protein Homology CDS 30815 31426 . + 0 ID=cds-WP_248247775.1;Parent=gene-VMS06_RS21835;Dbxref=GenBank:WP_248247775.1;Name=WP_248247775.1;Ontology_term=GO:0004803;end_range=31426,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=VMS06_RS21835;partial=true;product=IS5 family transposase;protein_id=WP_248247775.1;transl_table=11 ##sequence-region NZ_JAVXZI010000028.1 1 29177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000028.1 RefSeq region 1 29177 . + . ID=NZ_JAVXZI010000028.1:1..29177;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000028.1 RefSeq gene 367 1956 . + . ID=gene-VMS06_RS21840;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=VMS06_RS21840 NZ_JAVXZI010000028.1 Protein Homology CDS 367 1956 . + 0 ID=cds-WP_022646715.1;Parent=gene-VMS06_RS21840;Dbxref=GenBank:WP_022646715.1;Name=WP_022646715.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=VMS06_RS21840;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_022646715.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 1972 3264 . + . ID=gene-VMS06_RS21845;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=VMS06_RS21845 NZ_JAVXZI010000028.1 Protein Homology CDS 1972 3264 . + 0 ID=cds-WP_063138231.1;Parent=gene-VMS06_RS21845;Dbxref=GenBank:WP_063138231.1;Name=WP_063138231.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010425912.1;locus_tag=VMS06_RS21845;product=phosphoribosylamine--glycine ligase;protein_id=WP_063138231.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 3314 4006 . - . ID=gene-VMS06_RS21850;Name=VMS06_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21850 NZ_JAVXZI010000028.1 Protein Homology CDS 3314 4006 . - 0 ID=cds-WP_022646713.1;Parent=gene-VMS06_RS21850;Dbxref=GenBank:WP_022646713.1;Name=WP_022646713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010425913.1;locus_tag=VMS06_RS21850;product=DUF1481 domain-containing protein;protein_id=WP_022646713.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 4018 4290 . - . ID=gene-VMS06_RS21855;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=VMS06_RS21855 NZ_JAVXZI010000028.1 Protein Homology CDS 4018 4290 . - 0 ID=cds-WP_002445246.1;Parent=gene-VMS06_RS21855;Dbxref=GenBank:WP_002445246.1;Name=WP_002445246.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=VMS06_RS21855;product=nucleoid-associated protein HU-alpha;protein_id=WP_002445246.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 4477 5067 . - . ID=gene-VMS06_RS21860;Name=VMS06_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21860 NZ_JAVXZI010000028.1 Protein Homology CDS 4477 5067 . - 0 ID=cds-WP_022646712.1;Parent=gene-VMS06_RS21860;Dbxref=GenBank:WP_022646712.1;Name=WP_022646712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463038.1;locus_tag=VMS06_RS21860;product=YjaG family protein;protein_id=WP_022646712.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 5109 5780 . - . ID=gene-VMS06_RS21865;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=VMS06_RS21865 NZ_JAVXZI010000028.1 Protein Homology CDS 5109 5780 . - 0 ID=cds-WP_063148483.1;Parent=gene-VMS06_RS21865;Dbxref=GenBank:WP_063148483.1;Name=WP_063148483.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312948.1;locus_tag=VMS06_RS21865;product=deoxyribonuclease V;protein_id=WP_063148483.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 5790 6854 . - . ID=gene-VMS06_RS21870;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=VMS06_RS21870 NZ_JAVXZI010000028.1 Protein Homology CDS 5790 6854 . - 0 ID=cds-WP_063148482.1;Parent=gene-VMS06_RS21870;Dbxref=GenBank:WP_063148482.1;Name=WP_063148482.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224516.1;locus_tag=VMS06_RS21870;product=uroporphyrinogen decarboxylase;protein_id=WP_063148482.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 6893 7666 . - . ID=gene-VMS06_RS21875;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=VMS06_RS21875 NZ_JAVXZI010000028.1 Protein Homology CDS 6893 7666 . - 0 ID=cds-WP_022646710.1;Parent=gene-VMS06_RS21875;Dbxref=GenBank:WP_022646710.1;Name=WP_022646710.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312946.1;locus_tag=VMS06_RS21875;product=NAD(+) diphosphatase;protein_id=WP_022646710.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 7762 8259 . + . ID=gene-VMS06_RS21880;Name=VMS06_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21880 NZ_JAVXZI010000028.1 Protein Homology CDS 7762 8259 . + 0 ID=cds-WP_017384077.1;Parent=gene-VMS06_RS21880;Dbxref=GenBank:WP_017384077.1;Name=WP_017384077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224514.1;locus_tag=VMS06_RS21880;product=Rsd/AlgQ family anti-sigma factor;protein_id=WP_017384077.1;transl_table=11 NZ_JAVXZI010000028.1 cmsearch riboswitch 8314 8423 . + . ID=id-NZ_JAVXZI010000028.1:8314..8423;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAVXZI010000028.1 RefSeq gene 8503 10398 . + . ID=gene-VMS06_RS21885;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=VMS06_RS21885 NZ_JAVXZI010000028.1 Protein Homology CDS 8503 10398 . + 0 ID=cds-WP_063148481.1;Parent=gene-VMS06_RS21885;Dbxref=GenBank:WP_063148481.1;Name=WP_063148481.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463033.1;locus_tag=VMS06_RS21885;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_063148481.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 10398 11039 . + . ID=gene-VMS06_RS21890;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=VMS06_RS21890 NZ_JAVXZI010000028.1 Protein Homology CDS 10398 11039 . + 0 ID=cds-WP_023299073.1;Parent=gene-VMS06_RS21890;Dbxref=GenBank:WP_023299073.1;Name=WP_023299073.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015569969.1;locus_tag=VMS06_RS21890;product=thiamine phosphate synthase;protein_id=WP_023299073.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 11026 11781 . + . ID=gene-VMS06_RS21895;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=VMS06_RS21895 NZ_JAVXZI010000028.1 Protein Homology CDS 11026 11781 . + 0 ID=cds-WP_063148480.1;Parent=gene-VMS06_RS21895;Dbxref=GenBank:WP_063148480.1;Name=WP_063148480.1;Ontology_term=GO:0009228,GO:0016779;gbkey=CDS;gene=thiF;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709786.2;locus_tag=VMS06_RS21895;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=WP_063148480.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 11765 11965 . + . ID=gene-VMS06_RS21900;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=VMS06_RS21900 NZ_JAVXZI010000028.1 Protein Homology CDS 11765 11965 . + 0 ID=cds-WP_032626499.1;Parent=gene-VMS06_RS21900;Dbxref=GenBank:WP_032626499.1;Name=WP_032626499.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132879.1;locus_tag=VMS06_RS21900;product=sulfur carrier protein ThiS;protein_id=WP_032626499.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 11967 12734 . + . ID=gene-VMS06_RS21905;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=VMS06_RS21905 NZ_JAVXZI010000028.1 Protein Homology CDS 11967 12734 . + 0 ID=cds-WP_023299071.1;Parent=gene-VMS06_RS21905;Dbxref=GenBank:WP_023299071.1;Name=WP_023299071.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003862326.1;locus_tag=VMS06_RS21905;product=thiazole synthase;protein_id=WP_023299071.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 12734 13867 . + . ID=gene-VMS06_RS21910;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=VMS06_RS21910 NZ_JAVXZI010000028.1 Protein Homology CDS 12734 13867 . + 0 ID=cds-WP_022646704.1;Parent=gene-VMS06_RS21910;Dbxref=GenBank:WP_022646704.1;Name=WP_022646704.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000847564.1;locus_tag=VMS06_RS21910;product=2-iminoacetate synthase ThiH;protein_id=WP_022646704.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 14201 15742 . + . ID=gene-VMS06_RS21915;Name=VMS06_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21915 NZ_JAVXZI010000028.1 Protein Homology CDS 14201 15742 . + 0 ID=cds-WP_063148479.1;Parent=gene-VMS06_RS21915;Dbxref=GenBank:WP_063148479.1;Name=WP_063148479.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384082.1;locus_tag=VMS06_RS21915;product=sensor domain-containing diguanylate cyclase;protein_id=WP_063148479.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 15923 16231 . + . ID=gene-VMS06_RS21920;Name=VMS06_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21920 NZ_JAVXZI010000028.1 Protein Homology CDS 15923 16231 . + 0 ID=cds-WP_010425948.1;Parent=gene-VMS06_RS21920;Dbxref=GenBank:WP_010425948.1;Name=WP_010425948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503456.1;locus_tag=VMS06_RS21920;product=PTS sugar transporter subunit IIB;protein_id=WP_010425948.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 16231 16548 . + . ID=gene-VMS06_RS21925;Name=VMS06_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21925 NZ_JAVXZI010000028.1 Protein Homology CDS 16231 16548 . + 0 ID=cds-WP_003862327.1;Parent=gene-VMS06_RS21925;Dbxref=GenBank:WP_003862327.1;Name=WP_003862327.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016740,GO:0016773,GO:0046872,GO:0051119,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=transferase activity|0016740||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,metal ion binding|0046872||IEA,sugar transmembrane transporter activity|0051119||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176750.1;locus_tag=VMS06_RS21925;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_003862327.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 16664 20887 . - . ID=gene-VMS06_RS21930;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=VMS06_RS21930 NZ_JAVXZI010000028.1 Protein Homology CDS 16664 20887 . - 0 ID=cds-WP_023299069.1;Parent=gene-VMS06_RS21930;Dbxref=GenBank:WP_023299069.1;Name=WP_023299069.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463023.1;locus_tag=VMS06_RS21930;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_023299069.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 20964 24992 . - . ID=gene-VMS06_RS21935;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=VMS06_RS21935 NZ_JAVXZI010000028.1 Protein Homology CDS 20964 24992 . - 0 ID=cds-WP_023299068.1;Parent=gene-VMS06_RS21935;Dbxref=GenBank:WP_023299068.1;Name=WP_023299068.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=VMS06_RS21935;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_023299068.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 25312 25677 . - . ID=gene-VMS06_RS21940;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=VMS06_RS21940 NZ_JAVXZI010000028.1 Protein Homology CDS 25312 25677 . - 0 ID=cds-WP_002445276.1;Parent=gene-VMS06_RS21940;Dbxref=GenBank:WP_002445276.1;Name=WP_002445276.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=VMS06_RS21940;product=50S ribosomal protein L7/L12;protein_id=WP_002445276.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 25744 26241 . - . ID=gene-VMS06_RS21945;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=VMS06_RS21945 NZ_JAVXZI010000028.1 Protein Homology CDS 25744 26241 . - 0 ID=cds-WP_003862338.1;Parent=gene-VMS06_RS21945;Dbxref=GenBank:WP_003862338.1;Name=WP_003862338.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=VMS06_RS21945;product=50S ribosomal protein L10;protein_id=WP_003862338.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 26531 27235 . - . ID=gene-VMS06_RS21950;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=VMS06_RS21950 NZ_JAVXZI010000028.1 Protein Homology CDS 26531 27235 . - 0 ID=cds-WP_006810530.1;Parent=gene-VMS06_RS21950;Dbxref=GenBank:WP_006810530.1;Name=WP_006810530.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312934.1;locus_tag=VMS06_RS21950;product=50S ribosomal protein L1;protein_id=WP_006810530.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 27239 27667 . - . ID=gene-VMS06_RS21955;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=VMS06_RS21955 NZ_JAVXZI010000028.1 Protein Homology CDS 27239 27667 . - 0 ID=cds-WP_003862340.1;Parent=gene-VMS06_RS21955;Dbxref=GenBank:WP_003862340.1;Name=WP_003862340.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=VMS06_RS21955;product=50S ribosomal protein L11;protein_id=WP_003862340.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 27824 28369 . - . ID=gene-VMS06_RS21960;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=VMS06_RS21960 NZ_JAVXZI010000028.1 Protein Homology CDS 27824 28369 . - 0 ID=cds-WP_003862341.1;Parent=gene-VMS06_RS21960;Dbxref=GenBank:WP_003862341.1;Name=WP_003862341.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=VMS06_RS21960;product=transcription termination/antitermination protein NusG;protein_id=WP_003862341.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 28371 28754 . - . ID=gene-VMS06_RS21965;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=VMS06_RS21965 NZ_JAVXZI010000028.1 Protein Homology CDS 28371 28754 . - 0 ID=cds-WP_003862342.1;Parent=gene-VMS06_RS21965;Dbxref=GenBank:WP_003862342.1;Name=WP_003862342.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=VMS06_RS21965;product=preprotein translocase subunit SecE;protein_id=WP_003862342.1;transl_table=11 NZ_JAVXZI010000028.1 RefSeq gene 28982 29177 . - . ID=gene-VMS06_RS21970;Name=VMS06_RS21970;end_range=29177,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21970;partial=true NZ_JAVXZI010000028.1 Protein Homology CDS 28982 29177 . - 1 ID=cds-WP_031616099.1;Parent=gene-VMS06_RS21970;Dbxref=GenBank:WP_031616099.1;Name=WP_031616099.1;end_range=29177,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=VMS06_RS21970;partial=true;product=EF-Tu C-terminal domain-related protein;protein_id=WP_031616099.1;transl_table=11 ##sequence-region NZ_JAVXZI010000029.1 1 27870 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000029.1 RefSeq region 1 27870 . + . ID=NZ_JAVXZI010000029.1:1..27870;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000029.1 RefSeq pseudogene 65 378 . - . ID=gene-VMS06_RS21975;Name=VMS06_RS21975;end_range=378,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS21975;partial=true;pseudo=true;start_range=.,65 NZ_JAVXZI010000029.1 Protein Homology CDS 65 378 . - 0 ID=cds-VMS06_RS21975;Parent=gene-VMS06_RS21975;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=378,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011846847.1;locus_tag=VMS06_RS21975;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,65;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 405 1157 . - . ID=gene-VMS06_RS21980;Name=VMS06_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21980 NZ_JAVXZI010000029.1 Protein Homology CDS 405 1157 . - 0 ID=cds-WP_023307212.1;Parent=gene-VMS06_RS21980;Dbxref=GenBank:WP_023307212.1;Name=WP_023307212.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734115.1;locus_tag=VMS06_RS21980;product=alpha/beta hydrolase family protein;protein_id=WP_023307212.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 1399 1698 . + . ID=gene-VMS06_RS21985;Name=VMS06_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21985 NZ_JAVXZI010000029.1 GeneMarkS-2+ CDS 1399 1698 . + 0 ID=cds-WP_023307211.1;Parent=gene-VMS06_RS21985;Dbxref=GenBank:WP_023307211.1;Name=WP_023307211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS21985;product=hypothetical protein;protein_id=WP_023307211.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 1761 2534 . - . ID=gene-VMS06_RS21990;Name=VMS06_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21990 NZ_JAVXZI010000029.1 Protein Homology CDS 1761 2534 . - 0 ID=cds-WP_023307210.1;Parent=gene-VMS06_RS21990;Dbxref=GenBank:WP_023307210.1;Name=WP_023307210.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016240531.1;locus_tag=VMS06_RS21990;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_023307210.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 2600 3301 . - . ID=gene-VMS06_RS21995;Name=VMS06_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS21995 NZ_JAVXZI010000029.1 Protein Homology CDS 2600 3301 . - 0 ID=cds-WP_023304046.1;Parent=gene-VMS06_RS21995;Dbxref=GenBank:WP_023304046.1;Name=WP_023304046.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194072.1;locus_tag=VMS06_RS21995;product=DsbA family oxidoreductase;protein_id=WP_023304046.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 3367 4473 . - . ID=gene-VMS06_RS22000;Name=VMS06_RS22000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22000 NZ_JAVXZI010000029.1 Protein Homology CDS 3367 4473 . - 0 ID=cds-WP_006687059.1;Parent=gene-VMS06_RS22000;Dbxref=GenBank:WP_006687059.1;Name=WP_006687059.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000039982.1;locus_tag=VMS06_RS22000;product=alkene reductase;protein_id=WP_006687059.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 4686 5015 . + . ID=gene-VMS06_RS22005;Name=VMS06_RS22005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22005 NZ_JAVXZI010000029.1 Protein Homology CDS 4686 5015 . + 0 ID=cds-WP_023304047.1;Parent=gene-VMS06_RS22005;Dbxref=GenBank:WP_023304047.1;Name=WP_023304047.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002431133.1;locus_tag=VMS06_RS22005;product=thioredoxin family protein;protein_id=WP_023304047.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 5045 5383 . - . ID=gene-VMS06_RS22010;Name=VMS06_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22010 NZ_JAVXZI010000029.1 Protein Homology CDS 5045 5383 . - 0 ID=cds-WP_000888080.1;Parent=gene-VMS06_RS22010;Dbxref=GenBank:WP_000888080.1;Name=WP_000888080.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016246488.1;locus_tag=VMS06_RS22010;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_000888080.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 5388 5969 . - . ID=gene-VMS06_RS22015;Name=VMS06_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22015 NZ_JAVXZI010000029.1 Protein Homology CDS 5388 5969 . - 0 ID=cds-WP_023304048.1;Parent=gene-VMS06_RS22015;Dbxref=GenBank:WP_023304048.1;Name=WP_023304048.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502230.1;locus_tag=VMS06_RS22015;product=TetR/AcrR family transcriptional regulator;protein_id=WP_023304048.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 6111 6668 . - . ID=gene-VMS06_RS22020;Name=VMS06_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22020 NZ_JAVXZI010000029.1 Protein Homology CDS 6111 6668 . - 0 ID=cds-WP_023304049.1;Parent=gene-VMS06_RS22020;Dbxref=GenBank:WP_023304049.1;Name=WP_023304049.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000108588.1;locus_tag=VMS06_RS22020;product=OsmC family protein;protein_id=WP_023304049.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 6912 8939 . + . ID=gene-VMS06_RS22025;Name=VMS06_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22025 NZ_JAVXZI010000029.1 Protein Homology CDS 6912 8939 . + 0 ID=cds-WP_009653620.1;Parent=gene-VMS06_RS22025;Dbxref=GenBank:WP_009653620.1;Name=WP_009653620.1;Ontology_term=GO:0009307,GO:0003677,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016162084.1;locus_tag=VMS06_RS22025;product=type I restriction-modification system subunit M;protein_id=WP_009653620.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 8936 10270 . + . ID=gene-VMS06_RS22030;Name=VMS06_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22030 NZ_JAVXZI010000029.1 Protein Homology CDS 8936 10270 . + 0 ID=cds-WP_009653617.1;Parent=gene-VMS06_RS22030;Dbxref=GenBank:WP_009653617.1;Name=WP_009653617.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016162085.1;locus_tag=VMS06_RS22030;product=restriction endonuclease subunit S;protein_id=WP_009653617.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 10271 13528 . + . ID=gene-VMS06_RS22035;Name=VMS06_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22035 NZ_JAVXZI010000029.1 Protein Homology CDS 10271 13528 . + 0 ID=cds-WP_009653619.1;Parent=gene-VMS06_RS22035;Dbxref=GenBank:WP_009653619.1;Name=WP_009653619.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705992.1;locus_tag=VMS06_RS22035;product=type I restriction endonuclease subunit R;protein_id=WP_009653619.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 13533 14801 . + . ID=gene-VMS06_RS22040;Name=VMS06_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22040 NZ_JAVXZI010000029.1 Protein Homology CDS 13533 14801 . + 0 ID=cds-WP_009653618.1;Parent=gene-VMS06_RS22040;Dbxref=GenBank:WP_009653618.1;Name=WP_009653618.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152342.1;locus_tag=VMS06_RS22040;product=ISL3-like element ISKpn25 family transposase;protein_id=WP_009653618.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 14834 15019 . + . ID=gene-VMS06_RS22045;Name=VMS06_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22045 NZ_JAVXZI010000029.1 GeneMarkS-2+ CDS 14834 15019 . + 0 ID=cds-WP_125375351.1;Parent=gene-VMS06_RS22045;Dbxref=GenBank:WP_125375351.1;Name=WP_125375351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS22045;product=hypothetical protein;protein_id=WP_125375351.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 15033 15617 . - . ID=gene-VMS06_RS22050;Name=VMS06_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22050 NZ_JAVXZI010000029.1 Protein Homology CDS 15033 15617 . - 0 ID=cds-WP_008502231.1;Parent=gene-VMS06_RS22050;Dbxref=GenBank:WP_008502231.1;Name=WP_008502231.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008502231.1;locus_tag=VMS06_RS22050;product=recombinase family protein;protein_id=WP_008502231.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq pseudogene 15777 17284 . + . ID=gene-VMS06_RS22055;Name=VMS06_RS22055;end_range=17284,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22055;partial=true;pseudo=true NZ_JAVXZI010000029.1 Protein Homology CDS 15777 17284 . + 0 ID=cds-VMS06_RS22055;Parent=gene-VMS06_RS22055;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17284,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011846847.1;locus_tag=VMS06_RS22055;partial=true;product=DUF4158 domain-containing protein;pseudo=true;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 17318 20215 . - . ID=gene-VMS06_RS22060;Name=VMS06_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22060 NZ_JAVXZI010000029.1 Protein Homology CDS 17318 20215 . - 0 ID=cds-WP_023307208.1;Parent=gene-VMS06_RS22060;Dbxref=GenBank:WP_023307208.1;Name=WP_023307208.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020326821.1;locus_tag=VMS06_RS22060;product=Tn3-like element Tn5403 family transposase;protein_id=WP_023307208.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 20310 20915 . + . ID=gene-VMS06_RS22065;Name=VMS06_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22065 NZ_JAVXZI010000029.1 Protein Homology CDS 20310 20915 . + 0 ID=cds-WP_000509966.1;Parent=gene-VMS06_RS22065;Dbxref=GenBank:WP_000509966.1;Name=WP_000509966.1;Ontology_term=GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549957.1;locus_tag=VMS06_RS22065;product=recombinase family protein;protein_id=WP_000509966.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 21575 22756 . + . ID=gene-VMS06_RS22070;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=VMS06_RS22070 NZ_JAVXZI010000029.1 Protein Homology CDS 21575 22756 . + 0 ID=cds-WP_004194048.1;Parent=gene-VMS06_RS22070;Dbxref=GenBank:WP_004194048.1;Name=WP_004194048.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194048.1;locus_tag=VMS06_RS22070;product=Na+/H+ antiporter NhaA;protein_id=WP_004194048.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 23183 23497 . - . ID=gene-VMS06_RS22075;Name=VMS06_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22075 NZ_JAVXZI010000029.1 Protein Homology CDS 23183 23497 . - 0 ID=cds-WP_000091613.1;Parent=gene-VMS06_RS22075;Dbxref=GenBank:WP_000091613.1;Name=WP_000091613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000091613.1;locus_tag=VMS06_RS22075;product=hypothetical protein;protein_id=WP_000091613.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 23752 24108 . - . ID=gene-VMS06_RS22080;Name=VMS06_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22080 NZ_JAVXZI010000029.1 Protein Homology CDS 23752 24108 . - 0 ID=cds-WP_000215515.1;Parent=gene-VMS06_RS22080;Dbxref=GenBank:WP_000215515.1;Name=WP_000215515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003465043.1;locus_tag=VMS06_RS22080;product=cupin domain-containing protein;protein_id=WP_000215515.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 24098 24499 . - . ID=gene-VMS06_RS22085;Name=VMS06_RS22085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22085 NZ_JAVXZI010000029.1 Protein Homology CDS 24098 24499 . - 0 ID=cds-WP_001293886.1;Parent=gene-VMS06_RS22085;Dbxref=GenBank:WP_001293886.1;Name=WP_001293886.1;Ontology_term=GO:0004540,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001293886.1;locus_tag=VMS06_RS22085;product=HepT-like ribonuclease domain-containing protein;protein_id=WP_001293886.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 24496 24786 . - . ID=gene-VMS06_RS22090;Name=VMS06_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22090 NZ_JAVXZI010000029.1 Protein Homology CDS 24496 24786 . - 0 ID=cds-WP_001247892.1;Parent=gene-VMS06_RS22090;Dbxref=GenBank:WP_001247892.1;Name=WP_001247892.1;Ontology_term=GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015378435.1;locus_tag=VMS06_RS22090;product=nucleotidyltransferase family protein;protein_id=WP_001247892.1;transl_table=11 NZ_JAVXZI010000029.1 RefSeq gene 24861 27827 . + . ID=gene-VMS06_RS22095;Name=VMS06_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22095 NZ_JAVXZI010000029.1 Protein Homology CDS 24861 27827 . + 0 ID=cds-WP_003100881.1;Parent=gene-VMS06_RS22095;Dbxref=GenBank:WP_003100881.1;Name=WP_003100881.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1;locus_tag=VMS06_RS22095;product=Tn3-like element ISPa38 family transposase;protein_id=WP_003100881.1;transl_table=11 ##sequence-region NZ_JAVXZI010000030.1 1 27212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000030.1 RefSeq region 1 27212 . + . ID=NZ_JAVXZI010000030.1:1..27212;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000030.1 RefSeq gene 419 1159 . + . ID=gene-VMS06_RS22100;Name=VMS06_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22100 NZ_JAVXZI010000030.1 Protein Homology CDS 419 1159 . + 0 ID=cds-WP_001515717.1;Parent=gene-VMS06_RS22100;Dbxref=GenBank:WP_001515717.1;Name=WP_001515717.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540156.1;locus_tag=VMS06_RS22100;product=tyrosine-type recombinase/integrase;protein_id=WP_001515717.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 1857 2867 . - . ID=gene-VMS06_RS22105;Name=VMS06_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22105 NZ_JAVXZI010000030.1 Protein Homology CDS 1857 2867 . - 0 ID=cds-WP_000200070.1;Parent=gene-VMS06_RS22105;Dbxref=GenBank:WP_000200070.1;Name=WP_000200070.1;Ontology_term=GO:0006270,GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900946.1;locus_tag=VMS06_RS22105;product=RepB family plasmid replication initiator protein;protein_id=WP_000200070.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 3618 4784 . + . ID=gene-VMS06_RS22110;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=VMS06_RS22110 NZ_JAVXZI010000030.1 Protein Homology CDS 3618 4784 . + 0 ID=cds-WP_000523812.1;Parent=gene-VMS06_RS22110;Dbxref=GenBank:WP_000523812.1;Name=WP_000523812.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052640.1;locus_tag=VMS06_RS22110;product=plasmid-partitioning protein SopA;protein_id=WP_000523812.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 4784 5755 . + . ID=gene-VMS06_RS22115;Name=VMS06_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22115 NZ_JAVXZI010000030.1 Protein Homology CDS 4784 5755 . + 0 ID=cds-WP_004206785.1;Parent=gene-VMS06_RS22115;Dbxref=GenBank:WP_004206785.1;Name=WP_004206785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817038.1;locus_tag=VMS06_RS22115;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_004206785.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 6909 7214 . - . ID=gene-VMS06_RS22120;Name=VMS06_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22120 NZ_JAVXZI010000030.1 Protein Homology CDS 6909 7214 . - 0 ID=cds-WP_008325193.1;Parent=gene-VMS06_RS22120;Dbxref=GenBank:WP_008325193.1;Name=WP_008325193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008325193.1;locus_tag=VMS06_RS22120;product=hypothetical protein;protein_id=WP_008325193.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 7268 7519 . - . ID=gene-VMS06_RS22125;Name=VMS06_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22125 NZ_JAVXZI010000030.1 Protein Homology CDS 7268 7519 . - 0 ID=cds-WP_004118488.1;Parent=gene-VMS06_RS22125;Dbxref=GenBank:WP_004118488.1;Name=WP_004118488.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004182043.1;locus_tag=VMS06_RS22125;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_004118488.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq pseudogene 7598 8740 . - . ID=gene-VMS06_RS22130;Name=umuC;end_range=8740,.;gbkey=Gene;gene=umuC;gene_biotype=pseudogene;locus_tag=VMS06_RS22130;partial=true;pseudo=true NZ_JAVXZI010000030.1 Protein Homology CDS 7598 8740 . - 0 ID=cds-VMS06_RS22130;Parent=gene-VMS06_RS22130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006281,GO:0003684;end_range=8740,.;gbkey=CDS;gene=umuC;go_function=damaged DNA binding|0003684||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152715.1;locus_tag=VMS06_RS22130;partial=true;product=translesion error-prone DNA polymerase V subunit UmuC;pseudo=true;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 8802 9809 . + . ID=gene-VMS06_RS22135;Name=VMS06_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22135 NZ_JAVXZI010000030.1 Protein Homology CDS 8802 9809 . + 0 ID=cds-WP_008325196.1;Parent=gene-VMS06_RS22135;Dbxref=GenBank:WP_008325196.1;Name=WP_008325196.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243538.1;locus_tag=VMS06_RS22135;product=tyrosine-type recombinase/integrase;protein_id=WP_008325196.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 9793 11385 . + . ID=gene-VMS06_RS22140;Name=VMS06_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22140 NZ_JAVXZI010000030.1 GeneMarkS-2+ CDS 9793 11385 . + 0 ID=cds-WP_023307201.1;Parent=gene-VMS06_RS22140;Dbxref=GenBank:WP_023307201.1;Name=WP_023307201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS22140;product=hypothetical protein;protein_id=WP_023307201.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 11320 12017 . - . ID=gene-VMS06_RS22145;Name=VMS06_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22145 NZ_JAVXZI010000030.1 Protein Homology CDS 11768 12017 . - 0 ID=cds-WP_223826526.1;Parent=gene-VMS06_RS22145;Dbxref=GenBank:WP_223826526.1;Name=WP_223826526.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=VMS06_RS22145;product=IS1-like element IS1A family transposase;protein_id=WP_223826526.1;transl_table=11 NZ_JAVXZI010000030.1 Protein Homology CDS 11320 11768 . - 2 ID=cds-WP_223826526.1;Parent=gene-VMS06_RS22145;Dbxref=GenBank:WP_223826526.1;Name=WP_223826526.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=VMS06_RS22145;product=IS1-like element IS1A family transposase;protein_id=WP_223826526.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 12076 12489 . + . ID=gene-VMS06_RS22150;Name=VMS06_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22150 NZ_JAVXZI010000030.1 Protein Homology CDS 12076 12489 . + 0 ID=cds-WP_323630710.1;Parent=gene-VMS06_RS22150;Dbxref=GenBank:WP_323630710.1;Name=WP_323630710.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022091.7;locus_tag=VMS06_RS22150;product=entry exclusion protein;protein_id=WP_323630710.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 12564 13238 . + . ID=gene-VMS06_RS22155;Name=VMS06_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22155 NZ_JAVXZI010000030.1 Protein Homology CDS 12564 13238 . + 0 ID=cds-WP_008324909.1;Parent=gene-VMS06_RS22155;Dbxref=GenBank:WP_008324909.1;Name=WP_008324909.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247525.1;locus_tag=VMS06_RS22155;product=tetratricopeptide repeat protein;protein_id=WP_008324909.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 13372 15573 . + . ID=gene-VMS06_RS22160;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=VMS06_RS22160 NZ_JAVXZI010000030.1 Protein Homology CDS 13372 15573 . + 0 ID=cds-WP_023307203.1;Parent=gene-VMS06_RS22160;Dbxref=GenBank:WP_023307203.1;Name=WP_023307203.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001593043.1;locus_tag=VMS06_RS22160;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_023307203.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 15573 20813 . + . ID=gene-VMS06_RS22165;Name=traI;gbkey=Gene;gene=traI;gene_biotype=protein_coding;locus_tag=VMS06_RS22165 NZ_JAVXZI010000030.1 Protein Homology CDS 15573 20813 . + 0 ID=cds-WP_023307204.1;Parent=gene-VMS06_RS22165;Dbxref=GenBank:WP_023307204.1;Name=WP_023307204.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=traI;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001463032.1;locus_tag=VMS06_RS22165;product=conjugative transfer relaxase/helicase TraI;protein_id=WP_023307204.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 20815 21552 . + . ID=gene-VMS06_RS22170;Name=traX;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=VMS06_RS22170 NZ_JAVXZI010000030.1 Protein Homology CDS 20815 21552 . + 0 ID=cds-WP_008324912.1;Parent=gene-VMS06_RS22170;Dbxref=GenBank:WP_008324912.1;Name=WP_008324912.1;gbkey=CDS;gene=traX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011901847.1;locus_tag=VMS06_RS22170;product=type-F conjugative transfer system pilin acetylase TraX;protein_id=WP_008324912.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 21619 22338 . + . ID=gene-VMS06_RS22175;Name=finO;gbkey=Gene;gene=finO;gene_biotype=protein_coding;locus_tag=VMS06_RS22175 NZ_JAVXZI010000030.1 Protein Homology CDS 21619 22338 . + 0 ID=cds-WP_008324922.1;Parent=gene-VMS06_RS22175;Dbxref=GenBank:WP_008324922.1;Name=WP_008324922.1;gbkey=CDS;gene=finO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008324922.1;locus_tag=VMS06_RS22175;product=fertility inhibition protein FinO;protein_id=WP_008324922.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 22331 23122 . + . ID=gene-VMS06_RS22180;Name=VMS06_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22180 NZ_JAVXZI010000030.1 Protein Homology CDS 22331 23122 . + 0 ID=cds-WP_008324924.1;Parent=gene-VMS06_RS22180;Dbxref=GenBank:WP_008324924.1;Name=WP_008324924.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011901848.1;locus_tag=VMS06_RS22180;product=DsbA family protein;protein_id=WP_008324924.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 23270 23815 . + . ID=gene-VMS06_RS22185;Name=VMS06_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22185 NZ_JAVXZI010000030.1 Protein Homology CDS 23270 23815 . + 0 ID=cds-WP_008324931.1;Parent=gene-VMS06_RS22185;Dbxref=GenBank:WP_008324931.1;Name=WP_008324931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008324931.1;locus_tag=VMS06_RS22185;product=phospholipase D family nuclease;protein_id=WP_008324931.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 23967 24245 . + . ID=gene-VMS06_RS22190;Name=VMS06_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22190 NZ_JAVXZI010000030.1 Protein Homology CDS 23967 24245 . + 0 ID=cds-WP_008324932.1;Parent=gene-VMS06_RS22190;Dbxref=GenBank:WP_008324932.1;Name=WP_008324932.1;Ontology_term=GO:0006276;gbkey=CDS;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006122288.1;locus_tag=VMS06_RS22190;product=replication regulatory protein RepA;protein_id=WP_008324932.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq pseudogene 24281 24384 . - . ID=gene-VMS06_RS22195;Name=VMS06_RS22195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22195;pseudo=true NZ_JAVXZI010000030.1 Protein Homology CDS 24281 24384 . - 0 ID=cds-VMS06_RS22195;Parent=gene-VMS06_RS22195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001407856.1;locus_tag=VMS06_RS22195;product=replication protein RepA;pseudo=true;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 24464 24541 . + . ID=gene-VMS06_RS22200;Name=tap;gbkey=Gene;gene=tap;gene_biotype=protein_coding;locus_tag=VMS06_RS22200 NZ_JAVXZI010000030.1 Protein Homology CDS 24464 24541 . + 0 ID=cds-WP_011201829.1;Parent=gene-VMS06_RS22200;Dbxref=GenBank:WP_011201829.1;Name=WP_011201829.1;Ontology_term=GO:0006276,GO:0031556;gbkey=CDS;gene=tap;go_process=plasmid maintenance|0006276||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323529.1;locus_tag=VMS06_RS22200;product=RepA leader peptide Tap;protein_id=WP_011201829.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 24522 25397 . + . ID=gene-VMS06_RS22205;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=VMS06_RS22205 NZ_JAVXZI010000030.1 Protein Homology CDS 24522 25397 . + 0 ID=cds-WP_085952537.1;Parent=gene-VMS06_RS22205;Dbxref=GenBank:WP_085952537.1;Name=WP_085952537.1;Ontology_term=GO:0006276;gbkey=CDS;gene=repA;go_process=plasmid maintenance|0006276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490498.3;locus_tag=VMS06_RS22205;product=incFII family plasmid replication initiator RepA;protein_id=WP_085952537.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 26395 26736 . + . ID=gene-VMS06_RS22210;Name=VMS06_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22210 NZ_JAVXZI010000030.1 GeneMarkS-2+ CDS 26395 26736 . + 0 ID=cds-WP_023307206.1;Parent=gene-VMS06_RS22210;Dbxref=GenBank:WP_023307206.1;Name=WP_023307206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS22210;product=hypothetical protein;protein_id=WP_023307206.1;transl_table=11 NZ_JAVXZI010000030.1 RefSeq gene 27117 27212 . - . ID=gene-VMS06_RS22215;Name=VMS06_RS22215;end_range=27212,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22215;partial=true NZ_JAVXZI010000030.1 Protein Homology CDS 27117 27212 . - 0 ID=cds-WP_000851394.1-2;Parent=gene-VMS06_RS22215;Dbxref=GenBank:WP_000851394.1;Name=WP_000851394.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=27212,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=VMS06_RS22215;partial=true;product=IS1 family transposase;protein_id=WP_000851394.1;transl_table=11 ##sequence-region NZ_JAVXZI010000031.1 1 26358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000031.1 RefSeq region 1 26358 . + . ID=NZ_JAVXZI010000031.1:1..26358;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000031.1 RefSeq gene 355 909 . + . ID=gene-VMS06_RS22220;Name=VMS06_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22220 NZ_JAVXZI010000031.1 Protein Homology CDS 355 909 . + 0 ID=cds-WP_022649577.1;Parent=gene-VMS06_RS22220;Dbxref=GenBank:WP_022649577.1;Name=WP_022649577.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967157.1;locus_tag=VMS06_RS22220;product=gamma carbonic anhydrase family protein;protein_id=WP_022649577.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 885 1133 . - . ID=gene-VMS06_RS22225;Name=VMS06_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22225 NZ_JAVXZI010000031.1 Protein Homology CDS 885 1133 . - 0 ID=cds-WP_022649578.1;Parent=gene-VMS06_RS22225;Dbxref=GenBank:WP_022649578.1;Name=WP_022649578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812183.1;locus_tag=VMS06_RS22225;product=DUF1488 family protein;protein_id=WP_022649578.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 1130 1948 . - . ID=gene-VMS06_RS22230;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=VMS06_RS22230 NZ_JAVXZI010000031.1 Protein Homology CDS 1130 1948 . - 0 ID=cds-WP_022649579.1;Parent=gene-VMS06_RS22230;Dbxref=GenBank:WP_022649579.1;Name=WP_022649579.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709069.2;locus_tag=VMS06_RS22230;product=shikimate dehydrogenase;protein_id=WP_022649579.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 1953 2525 . - . ID=gene-VMS06_RS22235;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=VMS06_RS22235 NZ_JAVXZI010000031.1 Protein Homology CDS 1953 2525 . - 0 ID=cds-WP_022649580.1;Parent=gene-VMS06_RS22235;Dbxref=GenBank:WP_022649580.1;Name=WP_022649580.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312175.1;locus_tag=VMS06_RS22235;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_022649580.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 2518 3072 . - . ID=gene-VMS06_RS22240;Name=VMS06_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22240 NZ_JAVXZI010000031.1 Protein Homology CDS 2518 3072 . - 0 ID=cds-WP_023298754.1;Parent=gene-VMS06_RS22240;Dbxref=GenBank:WP_023298754.1;Name=WP_023298754.1;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383725.1;locus_tag=VMS06_RS22240;product=DNA topoisomerase family protein;protein_id=WP_023298754.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 3099 3572 . - . ID=gene-VMS06_RS22245;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=VMS06_RS22245 NZ_JAVXZI010000031.1 Protein Homology CDS 3099 3572 . - 0 ID=cds-WP_000460665.1;Parent=gene-VMS06_RS22245;Dbxref=GenBank:WP_000460665.1;Name=WP_000460665.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=VMS06_RS22245;product=DUF494 family protein Smg;protein_id=WP_000460665.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 3544 4668 . - . ID=gene-VMS06_RS22250;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=VMS06_RS22250 NZ_JAVXZI010000031.1 Protein Homology CDS 3544 4668 . - 0 ID=cds-WP_032626756.1;Parent=gene-VMS06_RS22250;Dbxref=GenBank:WP_032626756.1;Name=WP_032626756.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132155.1;locus_tag=VMS06_RS22250;product=DNA-protecting protein DprA;protein_id=WP_032626756.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 4796 5305 . + . ID=gene-VMS06_RS22255;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=VMS06_RS22255 NZ_JAVXZI010000031.1 Protein Homology CDS 4796 5305 . + 0 ID=cds-WP_006812188.1;Parent=gene-VMS06_RS22255;Dbxref=GenBank:WP_006812188.1;Name=WP_006812188.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462310.1;locus_tag=VMS06_RS22255;product=peptide deformylase;protein_id=WP_006812188.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 5329 6276 . + . ID=gene-VMS06_RS22260;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=VMS06_RS22260 NZ_JAVXZI010000031.1 Protein Homology CDS 5329 6276 . + 0 ID=cds-WP_023298756.1;Parent=gene-VMS06_RS22260;Dbxref=GenBank:WP_023298756.1;Name=WP_023298756.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960697.1;locus_tag=VMS06_RS22260;product=methionyl-tRNA formyltransferase;protein_id=WP_023298756.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 6329 7615 . + . ID=gene-VMS06_RS22265;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=VMS06_RS22265 NZ_JAVXZI010000031.1 Protein Homology CDS 6329 7615 . + 0 ID=cds-WP_026080642.1;Parent=gene-VMS06_RS22265;Dbxref=GenBank:WP_026080642.1;Name=WP_026080642.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135419.1;locus_tag=VMS06_RS22265;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_026080642.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 7638 9014 . + . ID=gene-VMS06_RS22270;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=VMS06_RS22270 NZ_JAVXZI010000031.1 Protein Homology CDS 7638 9014 . + 0 ID=cds-WP_003863337.1;Parent=gene-VMS06_RS22270;Dbxref=GenBank:WP_003863337.1;Name=WP_003863337.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=VMS06_RS22270;product=Trk system potassium transporter TrkA;protein_id=WP_003863337.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 9161 9574 . + . ID=gene-VMS06_RS22275;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=VMS06_RS22275 NZ_JAVXZI010000031.1 Protein Homology CDS 9161 9574 . + 0 ID=cds-WP_003863335.1;Parent=gene-VMS06_RS22275;Dbxref=GenBank:WP_003863335.1;Name=WP_003863335.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863335.1;locus_tag=VMS06_RS22275;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_003863335.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 9575 9790 . - . ID=gene-VMS06_RS22280;Name=VMS06_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22280 NZ_JAVXZI010000031.1 Protein Homology CDS 9575 9790 . - 0 ID=cds-WP_022649585.1;Parent=gene-VMS06_RS22280;Dbxref=GenBank:WP_022649585.1;Name=WP_022649585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003863329.1;locus_tag=VMS06_RS22280;product=alternative ribosome-rescue factor A;protein_id=WP_022649585.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 9848 10273 . - . ID=gene-VMS06_RS22285;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=VMS06_RS22285 NZ_JAVXZI010000031.1 Protein Homology CDS 9848 10273 . - 0 ID=cds-WP_003863328.1;Parent=gene-VMS06_RS22285;Dbxref=GenBank:WP_003863328.1;Name=WP_003863328.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462316.1;locus_tag=VMS06_RS22285;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_003863328.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 10276 10644 . - . ID=gene-VMS06_RS22290;Name=VMS06_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22290 NZ_JAVXZI010000031.1 Protein Homology CDS 10276 10644 . - 0 ID=cds-WP_022649586.1;Parent=gene-VMS06_RS22290;Dbxref=GenBank:WP_022649586.1;Name=WP_022649586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229142.1;locus_tag=VMS06_RS22290;product=DnaJ family domain-containing protein;protein_id=WP_022649586.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 10752 11135 . - . ID=gene-VMS06_RS22295;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=VMS06_RS22295 NZ_JAVXZI010000031.1 Protein Homology CDS 10752 11135 . - 0 ID=cds-WP_001216368.1;Parent=gene-VMS06_RS22295;Dbxref=GenBank:WP_001216368.1;Name=WP_001216368.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312186.1;locus_tag=VMS06_RS22295;product=50S ribosomal protein L17;protein_id=WP_001216368.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 11176 12165 . - . ID=gene-VMS06_RS22300;Name=VMS06_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22300 NZ_JAVXZI010000031.1 Protein Homology CDS 11176 12165 . - 0 ID=cds-WP_002919219.1;Parent=gene-VMS06_RS22300;Dbxref=GenBank:WP_002919219.1;Name=WP_002919219.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=VMS06_RS22300;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002919219.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 12191 12811 . - . ID=gene-VMS06_RS22305;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=VMS06_RS22305 NZ_JAVXZI010000031.1 Protein Homology CDS 12191 12811 . - 0 ID=cds-WP_003863314.1;Parent=gene-VMS06_RS22305;Dbxref=GenBank:WP_003863314.1;Name=WP_003863314.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=VMS06_RS22305;product=30S ribosomal protein S4;protein_id=WP_003863314.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 12844 13233 . - . ID=gene-VMS06_RS22310;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=VMS06_RS22310 NZ_JAVXZI010000031.1 Protein Homology CDS 12844 13233 . - 0 ID=cds-WP_003863312.1;Parent=gene-VMS06_RS22310;Dbxref=GenBank:WP_003863312.1;Name=WP_003863312.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=VMS06_RS22310;product=30S ribosomal protein S11;protein_id=WP_003863312.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 13250 13606 . - . ID=gene-VMS06_RS22315;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=VMS06_RS22315 NZ_JAVXZI010000031.1 Protein Homology CDS 13250 13606 . - 0 ID=cds-WP_003863308.1;Parent=gene-VMS06_RS22315;Dbxref=GenBank:WP_003863308.1;Name=WP_003863308.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=VMS06_RS22315;product=30S ribosomal protein S13;protein_id=WP_003863308.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 13753 13869 . - . ID=gene-VMS06_RS22320;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=VMS06_RS22320 NZ_JAVXZI010000031.1 Protein Homology CDS 13753 13869 . - 0 ID=cds-WP_000868187.1;Parent=gene-VMS06_RS22320;Dbxref=GenBank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=VMS06_RS22320;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 13901 15232 . - . ID=gene-VMS06_RS22325;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=VMS06_RS22325 NZ_JAVXZI010000031.1 Protein Homology CDS 13901 15232 . - 0 ID=cds-WP_003863305.1;Parent=gene-VMS06_RS22325;Dbxref=GenBank:WP_003863305.1;Name=WP_003863305.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=VMS06_RS22325;product=preprotein translocase subunit SecY;protein_id=WP_003863305.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 15240 15674 . - . ID=gene-VMS06_RS22330;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=VMS06_RS22330 NZ_JAVXZI010000031.1 Protein Homology CDS 15240 15674 . - 0 ID=cds-WP_014885468.1;Parent=gene-VMS06_RS22330;Dbxref=GenBank:WP_014885468.1;Name=WP_014885468.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=VMS06_RS22330;product=50S ribosomal protein L15;protein_id=WP_014885468.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 15678 15857 . - . ID=gene-VMS06_RS22335;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=VMS06_RS22335 NZ_JAVXZI010000031.1 Protein Homology CDS 15678 15857 . - 0 ID=cds-WP_003863301.1;Parent=gene-VMS06_RS22335;Dbxref=GenBank:WP_003863301.1;Name=WP_003863301.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=VMS06_RS22335;product=50S ribosomal protein L30;protein_id=WP_003863301.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 15864 16364 . - . ID=gene-VMS06_RS22340;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=VMS06_RS22340 NZ_JAVXZI010000031.1 Protein Homology CDS 15864 16364 . - 0 ID=cds-WP_003863299.1;Parent=gene-VMS06_RS22340;Dbxref=GenBank:WP_003863299.1;Name=WP_003863299.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445361.1;locus_tag=VMS06_RS22340;product=30S ribosomal protein S5;protein_id=WP_003863299.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 16379 16732 . - . ID=gene-VMS06_RS22345;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=VMS06_RS22345 NZ_JAVXZI010000031.1 Protein Homology CDS 16379 16732 . - 0 ID=cds-WP_003863297.1;Parent=gene-VMS06_RS22345;Dbxref=GenBank:WP_003863297.1;Name=WP_003863297.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=VMS06_RS22345;product=50S ribosomal protein L18;protein_id=WP_003863297.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 16742 17275 . - . ID=gene-VMS06_RS22350;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=VMS06_RS22350 NZ_JAVXZI010000031.1 Protein Homology CDS 16742 17275 . - 0 ID=cds-WP_003863296.1;Parent=gene-VMS06_RS22350;Dbxref=GenBank:WP_003863296.1;Name=WP_003863296.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=VMS06_RS22350;product=50S ribosomal protein L6;protein_id=WP_003863296.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 17288 17680 . - . ID=gene-VMS06_RS22355;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=VMS06_RS22355 NZ_JAVXZI010000031.1 Protein Homology CDS 17288 17680 . - 0 ID=cds-WP_006178918.1;Parent=gene-VMS06_RS22355;Dbxref=GenBank:WP_006178918.1;Name=WP_006178918.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=VMS06_RS22355;product=30S ribosomal protein S8;protein_id=WP_006178918.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 17711 18016 . - . ID=gene-VMS06_RS22360;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=VMS06_RS22360 NZ_JAVXZI010000031.1 Protein Homology CDS 17711 18016 . - 0 ID=cds-WP_003863291.1;Parent=gene-VMS06_RS22360;Dbxref=GenBank:WP_003863291.1;Name=WP_003863291.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=VMS06_RS22360;product=30S ribosomal protein S14;protein_id=WP_003863291.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 18031 18570 . - . ID=gene-VMS06_RS22365;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=VMS06_RS22365 NZ_JAVXZI010000031.1 Protein Homology CDS 18031 18570 . - 0 ID=cds-WP_063148484.1;Parent=gene-VMS06_RS22365;Dbxref=GenBank:WP_063148484.1;Name=WP_063148484.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=VMS06_RS22365;product=50S ribosomal protein L5;protein_id=WP_063148484.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 18585 18899 . - . ID=gene-VMS06_RS22370;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=VMS06_RS22370 NZ_JAVXZI010000031.1 Protein Homology CDS 18585 18899 . - 0 ID=cds-WP_003863287.1;Parent=gene-VMS06_RS22370;Dbxref=GenBank:WP_003863287.1;Name=WP_003863287.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=VMS06_RS22370;product=50S ribosomal protein L24;protein_id=WP_003863287.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 18910 19281 . - . ID=gene-VMS06_RS22375;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=VMS06_RS22375 NZ_JAVXZI010000031.1 Protein Homology CDS 18910 19281 . - 0 ID=cds-WP_002919748.1;Parent=gene-VMS06_RS22375;Dbxref=GenBank:WP_002919748.1;Name=WP_002919748.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=VMS06_RS22375;product=50S ribosomal protein L14;protein_id=WP_002919748.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 19448 19702 . - . ID=gene-VMS06_RS22380;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=VMS06_RS22380 NZ_JAVXZI010000031.1 Protein Homology CDS 19448 19702 . - 0 ID=cds-WP_002438707.1;Parent=gene-VMS06_RS22380;Dbxref=GenBank:WP_002438707.1;Name=WP_002438707.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=VMS06_RS22380;product=30S ribosomal protein S17;protein_id=WP_002438707.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 19702 19893 . - . ID=gene-VMS06_RS22385;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=VMS06_RS22385 NZ_JAVXZI010000031.1 Protein Homology CDS 19702 19893 . - 0 ID=cds-WP_003863282.1;Parent=gene-VMS06_RS22385;Dbxref=GenBank:WP_003863282.1;Name=WP_003863282.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=VMS06_RS22385;product=50S ribosomal protein L29;protein_id=WP_003863282.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 19893 20303 . - . ID=gene-VMS06_RS22390;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=VMS06_RS22390 NZ_JAVXZI010000031.1 Protein Homology CDS 19893 20303 . - 0 ID=cds-WP_002919759.1;Parent=gene-VMS06_RS22390;Dbxref=GenBank:WP_002919759.1;Name=WP_002919759.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=VMS06_RS22390;product=50S ribosomal protein L16;protein_id=WP_002919759.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 20316 21017 . - . ID=gene-VMS06_RS22395;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=VMS06_RS22395 NZ_JAVXZI010000031.1 Protein Homology CDS 20316 21017 . - 0 ID=cds-WP_000529945.1;Parent=gene-VMS06_RS22395;Dbxref=GenBank:WP_000529945.1;Name=WP_000529945.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=VMS06_RS22395;product=30S ribosomal protein S3;protein_id=WP_000529945.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 21035 21367 . - . ID=gene-VMS06_RS22400;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=VMS06_RS22400 NZ_JAVXZI010000031.1 Protein Homology CDS 21035 21367 . - 0 ID=cds-WP_002919773.1;Parent=gene-VMS06_RS22400;Dbxref=GenBank:WP_002919773.1;Name=WP_002919773.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=VMS06_RS22400;product=50S ribosomal protein L22;protein_id=WP_002919773.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 21382 21660 . - . ID=gene-VMS06_RS22405;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=VMS06_RS22405 NZ_JAVXZI010000031.1 Protein Homology CDS 21382 21660 . - 0 ID=cds-WP_001138117.1;Parent=gene-VMS06_RS22405;Dbxref=GenBank:WP_001138117.1;Name=WP_001138117.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=VMS06_RS22405;product=30S ribosomal protein S19;protein_id=WP_001138117.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 21677 22498 . - . ID=gene-VMS06_RS22410;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=VMS06_RS22410 NZ_JAVXZI010000031.1 Protein Homology CDS 21677 22498 . - 0 ID=cds-WP_000301859.1;Parent=gene-VMS06_RS22410;Dbxref=GenBank:WP_000301859.1;Name=WP_000301859.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=VMS06_RS22410;product=50S ribosomal protein L2;protein_id=WP_000301859.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 22516 22818 . - . ID=gene-VMS06_RS22415;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=VMS06_RS22415 NZ_JAVXZI010000031.1 Protein Homology CDS 22516 22818 . - 0 ID=cds-WP_000617546.1;Parent=gene-VMS06_RS22415;Dbxref=GenBank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=VMS06_RS22415;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 22815 23420 . - . ID=gene-VMS06_RS22420;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=VMS06_RS22420 NZ_JAVXZI010000031.1 Protein Homology CDS 22815 23420 . - 0 ID=cds-WP_000424395.1;Parent=gene-VMS06_RS22420;Dbxref=GenBank:WP_000424395.1;Name=WP_000424395.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=VMS06_RS22420;product=50S ribosomal protein L4;protein_id=WP_000424395.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 23431 24060 . - . ID=gene-VMS06_RS22425;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=VMS06_RS22425 NZ_JAVXZI010000031.1 Protein Homology CDS 23431 24060 . - 0 ID=cds-WP_006178923.1;Parent=gene-VMS06_RS22425;Dbxref=GenBank:WP_006178923.1;Name=WP_006178923.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=VMS06_RS22425;product=50S ribosomal protein L3;protein_id=WP_006178923.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 24093 24404 . - . ID=gene-VMS06_RS22430;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=VMS06_RS22430 NZ_JAVXZI010000031.1 Protein Homology CDS 24093 24404 . - 0 ID=cds-WP_001181005.1;Parent=gene-VMS06_RS22430;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=VMS06_RS22430;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 24785 25258 . + . ID=gene-VMS06_RS22435;Name=VMS06_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22435 NZ_JAVXZI010000031.1 Protein Homology CDS 24785 25258 . + 0 ID=cds-WP_038416827.1;Parent=gene-VMS06_RS22435;Dbxref=GenBank:WP_038416827.1;Name=WP_038416827.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383731.1;locus_tag=VMS06_RS22435;product=prepilin peptidase;protein_id=WP_038416827.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 25242 25718 . - . ID=gene-VMS06_RS22440;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=VMS06_RS22440 NZ_JAVXZI010000031.1 Protein Homology CDS 25242 25718 . - 0 ID=cds-WP_003863270.1;Parent=gene-VMS06_RS22440;Dbxref=GenBank:WP_003863270.1;Name=WP_003863270.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178925.1;locus_tag=VMS06_RS22440;product=bacterioferritin;protein_id=WP_003863270.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 25791 25985 . - . ID=gene-VMS06_RS22445;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=VMS06_RS22445 NZ_JAVXZI010000031.1 Protein Homology CDS 25791 25985 . - 0 ID=cds-WP_003863268.1;Parent=gene-VMS06_RS22445;Dbxref=GenBank:WP_003863268.1;Name=WP_003863268.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709112.1;locus_tag=VMS06_RS22445;product=bacterioferritin-associated ferredoxin;protein_id=WP_003863268.1;transl_table=11 NZ_JAVXZI010000031.1 RefSeq gene 26163 26358 . - . ID=gene-VMS06_RS22450;Name=VMS06_RS22450;end_range=26358,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22450;partial=true NZ_JAVXZI010000031.1 Protein Homology CDS 26163 26358 . - 1 ID=cds-WP_031616099.1-2;Parent=gene-VMS06_RS22450;Dbxref=GenBank:WP_031616099.1;Name=WP_031616099.1;end_range=26358,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=VMS06_RS22450;partial=true;product=EF-Tu C-terminal domain-related protein;protein_id=WP_031616099.1;transl_table=11 ##sequence-region NZ_JAVXZI010000032.1 1 16707 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000032.1 RefSeq region 1 16707 . + . ID=NZ_JAVXZI010000032.1:1..16707;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000032.1 RefSeq gene 165 920 . - . ID=gene-VMS06_RS22455;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=VMS06_RS22455 NZ_JAVXZI010000032.1 Protein Homology CDS 165 920 . - 0 ID=cds-WP_006177354.1;Parent=gene-VMS06_RS22455;Dbxref=GenBank:WP_006177354.1;Name=WP_006177354.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177354.1;locus_tag=VMS06_RS22455;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_006177354.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 917 1762 . - . ID=gene-VMS06_RS22460;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=VMS06_RS22460 NZ_JAVXZI010000032.1 Protein Homology CDS 917 1762 . - 0 ID=cds-WP_022646781.1;Parent=gene-VMS06_RS22460;Dbxref=GenBank:WP_022646781.1;Name=WP_022646781.1;gbkey=CDS;gene=phnJ;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313108.1;locus_tag=VMS06_RS22460;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_022646781.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 1755 2819 . - . ID=gene-VMS06_RS22465;Name=VMS06_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22465 NZ_JAVXZI010000032.1 Protein Homology CDS 1755 2819 . - 0 ID=cds-WP_063148476.1;Parent=gene-VMS06_RS22465;Dbxref=GenBank:WP_063148476.1;Name=WP_063148476.1;Ontology_term=GO:0019634;gbkey=CDS;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295388.1;locus_tag=VMS06_RS22465;product=carbon-phosphorus lyase complex subunit;protein_id=WP_063148476.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 2819 3403 . - . ID=gene-VMS06_RS22470;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=VMS06_RS22470 NZ_JAVXZI010000032.1 Protein Homology CDS 2819 3403 . - 0 ID=cds-WP_003860219.1;Parent=gene-VMS06_RS22470;Dbxref=GenBank:WP_003860219.1;Name=WP_003860219.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418524.1;locus_tag=VMS06_RS22470;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_003860219.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 3400 3852 . - . ID=gene-VMS06_RS22475;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=VMS06_RS22475 NZ_JAVXZI010000032.1 Protein Homology CDS 3400 3852 . - 0 ID=cds-WP_022646783.1;Parent=gene-VMS06_RS22475;Dbxref=GenBank:WP_022646783.1;Name=WP_022646783.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313111.1;locus_tag=VMS06_RS22475;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_022646783.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 3853 4578 . - . ID=gene-VMS06_RS22480;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=VMS06_RS22480 NZ_JAVXZI010000032.1 Protein Homology CDS 3853 4578 . - 0 ID=cds-WP_022646784.1;Parent=gene-VMS06_RS22480;Dbxref=GenBank:WP_022646784.1;Name=WP_022646784.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418526.1;locus_tag=VMS06_RS22480;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_022646784.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 4599 5378 . - . ID=gene-VMS06_RS22485;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=VMS06_RS22485 NZ_JAVXZI010000032.1 Protein Homology CDS 4599 5378 . - 0 ID=cds-WP_022646785.1;Parent=gene-VMS06_RS22485;Dbxref=GenBank:WP_022646785.1;Name=WP_022646785.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313113.2;locus_tag=VMS06_RS22485;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_022646785.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 5429 6445 . - . ID=gene-VMS06_RS22490;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=VMS06_RS22490 NZ_JAVXZI010000032.1 Protein Homology CDS 5429 6445 . - 0 ID=cds-WP_022646786.1;Parent=gene-VMS06_RS22490;Dbxref=GenBank:WP_022646786.1;Name=WP_022646786.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418529.1;locus_tag=VMS06_RS22490;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_022646786.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 6469 7257 . - . ID=gene-VMS06_RS22495;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=VMS06_RS22495 NZ_JAVXZI010000032.1 Protein Homology CDS 6469 7257 . - 0 ID=cds-WP_003860210.1;Parent=gene-VMS06_RS22495;Dbxref=GenBank:WP_003860210.1;Name=WP_003860210.1;gbkey=CDS;gene=phnC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418530.1;locus_tag=VMS06_RS22495;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_003860210.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 7431 7862 . - . ID=gene-VMS06_RS22500;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=VMS06_RS22500 NZ_JAVXZI010000032.1 Protein Homology CDS 7431 7862 . - 0 ID=cds-WP_022646788.1;Parent=gene-VMS06_RS22500;Dbxref=GenBank:WP_022646788.1;Name=WP_022646788.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003860208.1;locus_tag=VMS06_RS22500;product=VOC family metalloprotein YjdN;protein_id=WP_022646788.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 7943 8278 . - . ID=gene-VMS06_RS22505;Name=VMS06_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22505 NZ_JAVXZI010000032.1 Protein Homology CDS 7943 8278 . - 0 ID=cds-WP_022646789.1;Parent=gene-VMS06_RS22505;Dbxref=GenBank:WP_022646789.1;Name=WP_022646789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463154.1;locus_tag=VMS06_RS22505;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_022646789.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 8870 11224 . + . ID=gene-VMS06_RS22510;Name=crfC;gbkey=Gene;gene=crfC;gene_biotype=protein_coding;locus_tag=VMS06_RS22510 NZ_JAVXZI010000032.1 Protein Homology CDS 8870 11224 . + 0 ID=cds-WP_063843941.1;Parent=gene-VMS06_RS22510;Dbxref=GenBank:WP_063843941.1;Name=WP_063843941.1;Ontology_term=GO:0005525;gbkey=CDS;gene=crfC;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177339.1;locus_tag=VMS06_RS22510;product=clamp-binding protein CrfC;protein_id=WP_063843941.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 11221 12099 . + . ID=gene-VMS06_RS22515;Name=VMS06_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22515 NZ_JAVXZI010000032.1 Protein Homology CDS 11221 12099 . + 0 ID=cds-WP_022646791.1;Parent=gene-VMS06_RS22515;Dbxref=GenBank:WP_022646791.1;Name=WP_022646791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810428.1;locus_tag=VMS06_RS22515;product=diguanylate cyclase regulator RdcB family protein;protein_id=WP_022646791.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 12133 13125 . - . ID=gene-VMS06_RS22520;Name=kdgT;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=VMS06_RS22520 NZ_JAVXZI010000032.1 Protein Homology CDS 12133 13125 . - 0 ID=cds-WP_022646792.1;Parent=gene-VMS06_RS22520;Dbxref=GenBank:WP_022646792.1;Name=WP_022646792.1;Ontology_term=GO:0046411,GO:0015649,GO:0016020;gbkey=CDS;gene=kdgT;go_component=membrane|0016020||IEA;go_function=2-keto-3-deoxygluconate:proton symporter activity|0015649||IEA;go_process=2-keto-3-deoxygluconate transmembrane transport|0046411||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012134529.1;locus_tag=VMS06_RS22520;product=2-keto-3-deoxygluconate transporter;protein_id=WP_022646792.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 13772 15274 . + . ID=gene-VMS06_RS22525;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=VMS06_RS22525 NZ_JAVXZI010000032.1 Protein Homology CDS 13772 15274 . + 0 ID=cds-WP_022646793.1;Parent=gene-VMS06_RS22525;Dbxref=GenBank:WP_022646793.1;Name=WP_022646793.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463155.1;locus_tag=VMS06_RS22525;product=glycine betaine/L-proline transporter ProP;protein_id=WP_022646793.1;transl_table=11 NZ_JAVXZI010000032.1 RefSeq gene 15307 16260 . - . ID=gene-VMS06_RS22530;Name=VMS06_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22530 NZ_JAVXZI010000032.1 Protein Homology CDS 15307 16260 . - 0 ID=cds-WP_023299116.1;Parent=gene-VMS06_RS22530;Dbxref=GenBank:WP_023299116.1;Name=WP_023299116.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016530769.1;locus_tag=VMS06_RS22530;product=nickel/cobalt transporter;protein_id=WP_023299116.1;transl_table=11 ##sequence-region NZ_JAVXZI010000033.1 1 6322 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000033.1 RefSeq region 1 6322 . + . ID=NZ_JAVXZI010000033.1:1..6322;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000033.1 RefSeq gene 276 1205 . + . ID=gene-VMS06_RS22535;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=VMS06_RS22535 NZ_JAVXZI010000033.1 Protein Homology CDS 276 1205 . + 0 ID=cds-WP_022646716.1;Parent=gene-VMS06_RS22535;Dbxref=GenBank:WP_022646716.1;Name=WP_022646716.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=VMS06_RS22535;product=homoserine O-acetyltransferase MetA;protein_id=WP_022646716.1;transl_table=11 NZ_JAVXZI010000033.1 RefSeq gene 1476 3077 . + . ID=gene-VMS06_RS22540;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=VMS06_RS22540 NZ_JAVXZI010000033.1 Protein Homology CDS 1476 3077 . + 0 ID=cds-WP_063148486.1;Parent=gene-VMS06_RS22540;Dbxref=GenBank:WP_063148486.1;Name=WP_063148486.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463048.1;locus_tag=VMS06_RS22540;product=malate synthase A;protein_id=WP_063148486.1;transl_table=11 NZ_JAVXZI010000033.1 RefSeq gene 3109 4413 . + . ID=gene-VMS06_RS22545;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=VMS06_RS22545 NZ_JAVXZI010000033.1 Protein Homology CDS 3109 4413 . + 0 ID=cds-WP_022646718.1;Parent=gene-VMS06_RS22545;Dbxref=GenBank:WP_022646718.1;Name=WP_022646718.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=VMS06_RS22545;product=isocitrate lyase;protein_id=WP_022646718.1;transl_table=11 NZ_JAVXZI010000033.1 RefSeq gene 4463 6202 . + . ID=gene-VMS06_RS22550;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=VMS06_RS22550 NZ_JAVXZI010000033.1 Protein Homology CDS 4463 6202 . + 0 ID=cds-WP_063148485.1;Parent=gene-VMS06_RS22550;Dbxref=GenBank:WP_063148485.1;Name=WP_063148485.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014830258.1;locus_tag=VMS06_RS22550;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_063148485.1;transl_table=11 ##sequence-region NZ_JAVXZI010000034.1 1 4332 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000034.1 RefSeq region 1 4332 . + . ID=NZ_JAVXZI010000034.1:1..4332;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000034.1 RefSeq gene 1 55 . - . ID=gene-VMS06_RS22930;Name=VMS06_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22930;partial=true;start_range=.,1 NZ_JAVXZI010000034.1 Protein Homology CDS 1 55 . - 0 ID=cds-WP_136677490.1;Parent=gene-VMS06_RS22930;Dbxref=GenBank:WP_136677490.1;Name=WP_136677490.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF015750.6;locus_tag=VMS06_RS22930;partial=true;product=IS1 family transposase;protein_id=WP_136677490.1;start_range=.,1;transl_table=11 NZ_JAVXZI010000034.1 RefSeq gene 105 365 . + . ID=gene-VMS06_RS22555;Name=VMS06_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22555 NZ_JAVXZI010000034.1 Protein Homology CDS 105 365 . + 0 ID=cds-WP_323630711.1;Parent=gene-VMS06_RS22555;Dbxref=GenBank:WP_323630711.1;Name=WP_323630711.1;Ontology_term=GO:0006355,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213599.1;locus_tag=VMS06_RS22555;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_323630711.1;transl_table=11 NZ_JAVXZI010000034.1 RefSeq gene 353 835 . + . ID=gene-VMS06_RS22560;Name=VMS06_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22560 NZ_JAVXZI010000034.1 Protein Homology CDS 353 835 . + 0 ID=cds-WP_003026803.1;Parent=gene-VMS06_RS22560;Dbxref=GenBank:WP_003026803.1;Name=WP_003026803.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540079.1;locus_tag=VMS06_RS22560;product=GNAT family N-acetyltransferase;protein_id=WP_003026803.1;transl_table=11 NZ_JAVXZI010000034.1 RefSeq gene 1047 2390 . + . ID=gene-VMS06_RS22565;Name=VMS06_RS22565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22565 NZ_JAVXZI010000034.1 Protein Homology CDS 1047 2390 . + 0 ID=cds-WP_080339306.1;Parent=gene-VMS06_RS22565;Dbxref=GenBank:WP_080339306.1;Name=WP_080339306.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611902.1;locus_tag=VMS06_RS22565;product=ISNCY family transposase;protein_id=WP_080339306.1;transl_table=11 NZ_JAVXZI010000034.1 RefSeq gene 2461 3279 . - . ID=gene-VMS06_RS22570;Name=VMS06_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22570 NZ_JAVXZI010000034.1 Protein Homology CDS 2461 3279 . - 0 ID=cds-WP_023307220.1;Parent=gene-VMS06_RS22570;Dbxref=GenBank:WP_023307220.1;Name=WP_023307220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013578399.1;locus_tag=VMS06_RS22570;product=abortive infection family protein;protein_id=WP_023307220.1;transl_table=11 NZ_JAVXZI010000034.1 RefSeq gene 3288 3860 . - . ID=gene-VMS06_RS22575;Name=VMS06_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22575 NZ_JAVXZI010000034.1 Protein Homology CDS 3288 3860 . - 0 ID=cds-WP_032676095.1;Parent=gene-VMS06_RS22575;Dbxref=GenBank:WP_032676095.1;Name=WP_032676095.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001196199.1;locus_tag=VMS06_RS22575;product=recombinase family protein;protein_id=WP_032676095.1;transl_table=11 ##sequence-region NZ_JAVXZI010000035.1 1 3292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000035.1 RefSeq region 1 3292 . + . ID=NZ_JAVXZI010000035.1:1..3292;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000035.1 RefSeq gene 75 461 . - . ID=gene-VMS06_RS22580;Name=VMS06_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22580 NZ_JAVXZI010000035.1 GeneMarkS-2+ CDS 75 461 . - 0 ID=cds-WP_023307218.1;Parent=gene-VMS06_RS22580;Dbxref=GenBank:WP_023307218.1;Name=WP_023307218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS22580;product=hypothetical protein;protein_id=WP_023307218.1;transl_table=11 NZ_JAVXZI010000035.1 RefSeq gene 608 1048 . + . ID=gene-VMS06_RS22585;Name=VMS06_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22585 NZ_JAVXZI010000035.1 Protein Homology CDS 608 1048 . + 0 ID=cds-WP_023307217.1;Parent=gene-VMS06_RS22585;Dbxref=GenBank:WP_023307217.1;Name=WP_023307217.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026046.1;locus_tag=VMS06_RS22585;product=transposase;protein_id=WP_023307217.1;transl_table=11 NZ_JAVXZI010000035.1 RefSeq gene 1045 1395 . + . ID=gene-VMS06_RS22590;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=VMS06_RS22590 NZ_JAVXZI010000035.1 Protein Homology CDS 1045 1395 . + 0 ID=cds-WP_004189161.1;Parent=gene-VMS06_RS22590;Dbxref=GenBank:WP_004189161.1;Name=WP_004189161.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=VMS06_RS22590;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_004189161.1;transl_table=11 NZ_JAVXZI010000035.1 RefSeq gene 1426 3018 . + . ID=gene-VMS06_RS22595;Name=VMS06_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22595 NZ_JAVXZI010000035.1 Protein Homology CDS 1426 3018 . + 0 ID=cds-WP_023307215.1;Parent=gene-VMS06_RS22595;Dbxref=GenBank:WP_023307215.1;Name=WP_023307215.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839879.1;locus_tag=VMS06_RS22595;product=IS66-like element ISKox1 family transposase;protein_id=WP_023307215.1;transl_table=11 ##sequence-region NZ_JAVXZI010000036.1 1 2606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000036.1 RefSeq region 1 2606 . + . ID=NZ_JAVXZI010000036.1:1..2606;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000036.1 RefSeq gene 186 404 . + . ID=gene-VMS06_RS22600;Name=VMS06_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22600 NZ_JAVXZI010000036.1 GeneMarkS-2+ CDS 186 404 . + 0 ID=cds-WP_198129632.1;Parent=gene-VMS06_RS22600;Dbxref=GenBank:WP_198129632.1;Name=WP_198129632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS22600;product=hypothetical protein;protein_id=WP_198129632.1;transl_table=11 NZ_JAVXZI010000036.1 RefSeq gene 695 880 . - . ID=gene-VMS06_RS22605;Name=VMS06_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22605 NZ_JAVXZI010000036.1 Protein Homology CDS 695 880 . - 0 ID=cds-WP_013772937.1;Parent=gene-VMS06_RS22605;Dbxref=GenBank:WP_013772937.1;Name=WP_013772937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016241003.1;locus_tag=VMS06_RS22605;product=Rop family plasmid primer RNA-binding protein;protein_id=WP_013772937.1;transl_table=11 NZ_JAVXZI010000036.1 RefSeq gene 1246 1473 . - . ID=gene-VMS06_RS22610;Name=VMS06_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22610 NZ_JAVXZI010000036.1 Protein Homology CDS 1246 1473 . - 0 ID=cds-WP_021243043.1;Parent=gene-VMS06_RS22610;Dbxref=GenBank:WP_021243043.1;Name=WP_021243043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000755141.1;locus_tag=VMS06_RS22610;product=YgdI/YgdR family lipoprotein;protein_id=WP_021243043.1;transl_table=11 ##sequence-region NZ_JAVXZI010000037.1 1 2374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000037.1 RefSeq region 1 2374 . + . ID=NZ_JAVXZI010000037.1:1..2374;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000037.1 RefSeq pseudogene 1 508 . - . ID=gene-VMS06_RS22615;Name=VMS06_RS22615;end_range=508,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22615;partial=true;pseudo=true;start_range=.,1 NZ_JAVXZI010000037.1 Protein Homology CDS 1 508 . - 0 ID=cds-VMS06_RS22615;Parent=gene-VMS06_RS22615;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=508,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170525.1;locus_tag=VMS06_RS22615;partial=true;product=type IV secretion protein Rhs;pseudo=true;start_range=.,1;transl_table=11 NZ_JAVXZI010000037.1 RefSeq gene 805 1323 . - . ID=gene-VMS06_RS22625;Name=VMS06_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22625 NZ_JAVXZI010000037.1 Protein Homology CDS 805 1323 . - 0 ID=cds-WP_063148493.1;Parent=gene-VMS06_RS22625;Dbxref=GenBank:WP_063148493.1;Name=WP_063148493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499502.1;locus_tag=VMS06_RS22625;product=hypothetical protein;protein_id=WP_063148493.1;transl_table=11 NZ_JAVXZI010000037.1 RefSeq gene 1608 1814 . - . ID=gene-VMS06_RS22630;Name=VMS06_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22630 NZ_JAVXZI010000037.1 Protein Homology CDS 1608 1814 . - 0 ID=cds-WP_022648388.1;Parent=gene-VMS06_RS22630;Dbxref=GenBank:WP_022648388.1;Name=WP_022648388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096217.1;locus_tag=VMS06_RS22630;product=hypothetical protein;protein_id=WP_022648388.1;transl_table=11 NZ_JAVXZI010000037.1 RefSeq gene 1820 2374 . - . ID=gene-VMS06_RS22635;Name=VMS06_RS22635;end_range=2374,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22635;partial=true NZ_JAVXZI010000037.1 Protein Homology CDS 1820 2374 . - 0 ID=cds-WP_323630712.1;Parent=gene-VMS06_RS22635;Dbxref=GenBank:WP_323630712.1;Name=WP_323630712.1;end_range=2374,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014884211.1;locus_tag=VMS06_RS22635;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_323630712.1;transl_table=11 ##sequence-region NZ_JAVXZI010000038.1 1 1769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000038.1 RefSeq region 1 1769 . + . ID=NZ_JAVXZI010000038.1:1..1769;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000038.1 RefSeq gene 58 1769 . + . ID=gene-VMS06_RS22640;Name=VMS06_RS22640;end_range=1769,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22640;partial=true NZ_JAVXZI010000038.1 cmsearch rRNA 58 1769 . + . ID=rna-VMS06_RS22640;Parent=gene-VMS06_RS22640;Dbxref=RFAM:RF02541;end_range=1769,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22640;partial=true;product=23S ribosomal RNA NZ_JAVXZI010000038.1 cmsearch exon 58 1769 . + . ID=exon-VMS06_RS22640-1;Parent=rna-VMS06_RS22640;Dbxref=RFAM:RF02541;end_range=1769,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22640;partial=true;product=23S ribosomal RNA ##sequence-region NZ_JAVXZI010000039.1 1 1493 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000039.1 RefSeq region 1 1493 . + . ID=NZ_JAVXZI010000039.1:1..1493;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000039.1 RefSeq pseudogene 1 316 . - . ID=gene-VMS06_RS22645;Name=VMS06_RS22645;end_range=316,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22645;partial=true;pseudo=true;start_range=.,1 NZ_JAVXZI010000039.1 Protein Homology CDS 1 316 . - 0 ID=cds-VMS06_RS22645;Parent=gene-VMS06_RS22645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=316,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170525.1;locus_tag=VMS06_RS22645;partial=true;product=RHS repeat domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAVXZI010000039.1 RefSeq gene 648 845 . - . ID=gene-VMS06_RS22650;Name=VMS06_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22650 NZ_JAVXZI010000039.1 GeneMarkS-2+ CDS 648 845 . - 0 ID=cds-WP_023300305.1;Parent=gene-VMS06_RS22650;Dbxref=GenBank:WP_023300305.1;Name=WP_023300305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=VMS06_RS22650;product=hypothetical protein;protein_id=WP_023300305.1;transl_table=11 NZ_JAVXZI010000039.1 RefSeq gene 860 1493 . - . ID=gene-VMS06_RS22655;Name=VMS06_RS22655;end_range=1493,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22655;partial=true NZ_JAVXZI010000039.1 Protein Homology CDS 860 1493 . - 1 ID=cds-WP_323630713.1;Parent=gene-VMS06_RS22655;Dbxref=GenBank:WP_323630713.1;Name=WP_323630713.1;end_range=1493,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014593973.1;locus_tag=VMS06_RS22655;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_323630713.1;transl_table=11 ##sequence-region NZ_JAVXZI010000040.1 1 1469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000040.1 RefSeq region 1 1469 . + . ID=NZ_JAVXZI010000040.1:1..1469;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000040.1 RefSeq gene 1 1449 . + . ID=gene-VMS06_RS22660;Name=VMS06_RS22660;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22660;partial=true;start_range=.,1 NZ_JAVXZI010000040.1 cmsearch rRNA 1 1449 . + . ID=rna-VMS06_RS22660;Parent=gene-VMS06_RS22660;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22660;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000040.1 cmsearch exon 1 1449 . + . ID=exon-VMS06_RS22660-1;Parent=rna-VMS06_RS22660;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22660;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAVXZI010000041.1 1 1396 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000041.1 RefSeq region 1 1396 . + . ID=NZ_JAVXZI010000041.1:1..1396;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000041.1 RefSeq pseudogene 1 130 . - . ID=gene-VMS06_RS22665;Name=VMS06_RS22665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22665;partial=true;pseudo=true;start_range=.,1 NZ_JAVXZI010000041.1 Protein Homology CDS 1 130 . - 0 ID=cds-VMS06_RS22665;Parent=gene-VMS06_RS22665;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=VMS06_RS22665;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAVXZI010000041.1 RefSeq gene 375 578 . + . ID=gene-VMS06_RS22675;Name=VMS06_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22675 NZ_JAVXZI010000041.1 Protein Homology CDS 375 578 . + 0 ID=cds-WP_004213596.1;Parent=gene-VMS06_RS22675;Dbxref=GenBank:WP_004213596.1;Name=WP_004213596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152106.1;locus_tag=VMS06_RS22675;product=HHA domain-containing protein;protein_id=WP_004213596.1;transl_table=11 NZ_JAVXZI010000041.1 RefSeq gene 592 822 . + . ID=gene-VMS06_RS22680;Name=VMS06_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22680 NZ_JAVXZI010000041.1 Protein Homology CDS 592 822 . + 0 ID=cds-WP_023307222.1;Parent=gene-VMS06_RS22680;Dbxref=GenBank:WP_023307222.1;Name=WP_023307222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725034.1;locus_tag=VMS06_RS22680;product=hypothetical protein;protein_id=WP_023307222.1;transl_table=11 NZ_JAVXZI010000041.1 RefSeq gene 1303 1396 . - . ID=gene-VMS06_RS22685;Name=VMS06_RS22685;end_range=1396,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22685;partial=true NZ_JAVXZI010000041.1 Protein Homology CDS 1303 1396 . - 1 ID=cds-WP_000306640.1;Parent=gene-VMS06_RS22685;Dbxref=GenBank:WP_000306640.1;Name=WP_000306640.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=1396,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612230.1;locus_tag=VMS06_RS22685;partial=true;product=IS1 family transposase;protein_id=WP_000306640.1;transl_table=11 ##sequence-region NZ_JAVXZI010000042.1 1 1352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000042.1 RefSeq region 1 1352 . + . ID=NZ_JAVXZI010000042.1:1..1352;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000042.1 RefSeq gene 1 1171 . + . ID=gene-VMS06_RS22690;Name=VMS06_RS22690;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22690;partial=true;start_range=.,1 NZ_JAVXZI010000042.1 cmsearch rRNA 1 1171 . + . ID=rna-VMS06_RS22690;Parent=gene-VMS06_RS22690;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22690;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000042.1 cmsearch exon 1 1171 . + . ID=exon-VMS06_RS22690-1;Parent=rna-VMS06_RS22690;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22690;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000042.1 RefSeq gene 1241 1352 . + . ID=gene-VMS06_RS22695;Name=rrf;end_range=1352,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VMS06_RS22695;partial=true NZ_JAVXZI010000042.1 cmsearch rRNA 1241 1352 . + . ID=rna-VMS06_RS22695;Parent=gene-VMS06_RS22695;Dbxref=RFAM:RF00001;end_range=1352,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22695;partial=true;product=5S ribosomal RNA NZ_JAVXZI010000042.1 cmsearch exon 1241 1352 . + . ID=exon-VMS06_RS22695-1;Parent=rna-VMS06_RS22695;Dbxref=RFAM:RF00001;end_range=1352,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22695;partial=true;product=5S ribosomal RNA ##sequence-region NZ_JAVXZI010000043.1 1 1317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000043.1 RefSeq region 1 1317 . + . ID=NZ_JAVXZI010000043.1:1..1317;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000043.1 RefSeq gene 36 1040 . + . ID=gene-VMS06_RS22700;Name=VMS06_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22700 NZ_JAVXZI010000043.1 Protein Homology CDS 36 1040 . + 0 ID=cds-WP_000427623.1;Parent=gene-VMS06_RS22700;Dbxref=GenBank:WP_000427623.1;Name=WP_000427623.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229637.1;locus_tag=VMS06_RS22700;product=IS110-like element IS4321 family transposase;protein_id=WP_000427623.1;transl_table=11 ##sequence-region NZ_JAVXZI010000044.1 1 1250 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000044.1 RefSeq region 1 1250 . + . ID=NZ_JAVXZI010000044.1:1..1250;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000044.1 RefSeq gene 9 1177 . - . ID=gene-VMS06_RS22705;Name=VMS06_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22705 NZ_JAVXZI010000044.1 Protein Homology CDS 928 1177 . - 0 ID=cds-WP_085929673.1;Parent=gene-VMS06_RS22705;Dbxref=GenBank:WP_085929673.1;Name=WP_085929673.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=VMS06_RS22705;product=IS3-like element ISEc52 family transposase;protein_id=WP_085929673.1;transl_table=11 NZ_JAVXZI010000044.1 Protein Homology CDS 9 928 . - 2 ID=cds-WP_085929673.1;Parent=gene-VMS06_RS22705;Dbxref=GenBank:WP_085929673.1;Name=WP_085929673.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611553.1;locus_tag=VMS06_RS22705;product=IS3-like element ISEc52 family transposase;protein_id=WP_085929673.1;transl_table=11 ##sequence-region NZ_JAVXZI010000045.1 1 1221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000045.1 RefSeq region 1 1221 . + . ID=NZ_JAVXZI010000045.1:1..1221;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000045.1 RefSeq gene 72 1192 . + . ID=gene-VMS06_RS22710;Name=VMS06_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22710 NZ_JAVXZI010000045.1 Protein Homology CDS 72 330 . + 0 ID=cds-WP_096147877.1;Parent=gene-VMS06_RS22710;Dbxref=GenBank:WP_096147877.1;Name=WP_096147877.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=VMS06_RS22710;product=IS3-like element ISSen4 family transposase;protein_id=WP_096147877.1;transl_table=11 NZ_JAVXZI010000045.1 Protein Homology CDS 330 1192 . + 2 ID=cds-WP_096147877.1;Parent=gene-VMS06_RS22710;Dbxref=GenBank:WP_096147877.1;Name=WP_096147877.1;Note=programmed frameshift;Ontology_term=GO:0006313,GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=VMS06_RS22710;product=IS3-like element ISSen4 family transposase;protein_id=WP_096147877.1;transl_table=11 ##sequence-region NZ_JAVXZI010000046.1 1 956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000046.1 RefSeq region 1 956 . + . ID=NZ_JAVXZI010000046.1:1..956;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000046.1 RefSeq gene 1 956 . - . ID=gene-VMS06_RS22715;Name=tuf;end_range=956,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=VMS06_RS22715;partial=true;start_range=.,1 NZ_JAVXZI010000046.1 Protein Homology CDS 1 956 . - 0 ID=cds-WP_323630714.1;Parent=gene-VMS06_RS22715;Dbxref=GenBank:WP_323630714.1;Name=WP_323630714.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=956,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462349.1;locus_tag=VMS06_RS22715;partial=true;product=elongation factor Tu;protein_id=WP_323630714.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVXZI010000047.1 1 768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000047.1 RefSeq region 1 768 . + . ID=NZ_JAVXZI010000047.1:1..768;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000047.1 RefSeq gene 16 713 . - . ID=gene-VMS06_RS22720;Name=VMS06_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22720 NZ_JAVXZI010000047.1 Protein Homology CDS 464 713 . - 0 ID=cds-WP_223274117.1;Parent=gene-VMS06_RS22720;Dbxref=GenBank:WP_223274117.1;Name=WP_223274117.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=VMS06_RS22720;product=IS1 family transposase;protein_id=WP_223274117.1;transl_table=11 NZ_JAVXZI010000047.1 Protein Homology CDS 16 464 . - 2 ID=cds-WP_223274117.1;Parent=gene-VMS06_RS22720;Dbxref=GenBank:WP_223274117.1;Name=WP_223274117.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558270.1;locus_tag=VMS06_RS22720;product=IS1 family transposase;protein_id=WP_223274117.1;transl_table=11 ##sequence-region NZ_JAVXZI010000048.1 1 654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000048.1 RefSeq region 1 654 . + . ID=NZ_JAVXZI010000048.1:1..654;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000048.1 RefSeq gene 31 648 . - . ID=gene-VMS06_RS22725;Name=VMS06_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22725 NZ_JAVXZI010000048.1 Protein Homology CDS 31 648 . - 0 ID=cds-WP_129008754.1;Parent=gene-VMS06_RS22725;Dbxref=GenBank:WP_129008754.1;Name=WP_129008754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000213046.1;locus_tag=VMS06_RS22725;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_129008754.1;transl_table=11 ##sequence-region NZ_JAVXZI010000049.1 1 613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000049.1 RefSeq region 1 613 . + . ID=NZ_JAVXZI010000049.1:1..613;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000049.1 RefSeq gene 1 56 . - . ID=gene-VMS06_RS22935;Name=VMS06_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22935;partial=true;start_range=.,1 NZ_JAVXZI010000049.1 Protein Homology CDS 1 56 . - 0 ID=cds-WP_136697432.1-2;Parent=gene-VMS06_RS22935;Dbxref=GenBank:WP_136697432.1;Name=WP_136697432.1;Ontology_term=GO:0006313;gbkey=CDS;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF015750.6;locus_tag=VMS06_RS22935;partial=true;product=IS1 family transposase;protein_id=WP_136697432.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVXZI010000050.1 1 585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000050.1 RefSeq region 1 585 . + . ID=NZ_JAVXZI010000050.1:1..585;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000050.1 RefSeq gene 1 567 . - . ID=gene-VMS06_RS22730;Name=VMS06_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=VMS06_RS22730;partial=true;start_range=.,1 NZ_JAVXZI010000050.1 Protein Homology CDS 1 567 . - 0 ID=cds-WP_323630715.1;Parent=gene-VMS06_RS22730;Dbxref=GenBank:WP_323630715.1;Name=WP_323630715.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612302.1;locus_tag=VMS06_RS22730;partial=true;product=IS5 family transposase;protein_id=WP_323630715.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVXZI010000051.1 1 580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000051.1 RefSeq region 1 580 . + . ID=NZ_JAVXZI010000051.1:1..580;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000051.1 RefSeq gene 225 300 . - . ID=gene-VMS06_RS22735;Name=VMS06_RS22735;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS22735 NZ_JAVXZI010000051.1 tRNAscan-SE tRNA 225 300 . - . ID=rna-VMS06_RS22735;Parent=gene-VMS06_RS22735;anticodon=(pos:complement(265..267));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS22735;product=tRNA-Ala NZ_JAVXZI010000051.1 tRNAscan-SE exon 225 300 . - . ID=exon-VMS06_RS22735-1;Parent=rna-VMS06_RS22735;anticodon=(pos:complement(265..267));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS22735;product=tRNA-Ala NZ_JAVXZI010000051.1 RefSeq gene 343 419 . - . ID=gene-VMS06_RS22740;Name=VMS06_RS22740;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS22740 NZ_JAVXZI010000051.1 tRNAscan-SE tRNA 343 419 . - . ID=rna-VMS06_RS22740;Parent=gene-VMS06_RS22740;anticodon=(pos:complement(383..385));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS22740;product=tRNA-Ile NZ_JAVXZI010000051.1 tRNAscan-SE exon 343 419 . - . ID=exon-VMS06_RS22740-1;Parent=rna-VMS06_RS22740;anticodon=(pos:complement(383..385));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS22740;product=tRNA-Ile NZ_JAVXZI010000051.1 RefSeq gene 490 580 . - . ID=gene-VMS06_RS22745;Name=VMS06_RS22745;end_range=580,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22745;partial=true NZ_JAVXZI010000051.1 cmsearch rRNA 490 580 . - . ID=rna-VMS06_RS22745;Parent=gene-VMS06_RS22745;Dbxref=RFAM:RF00177;end_range=580,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22745;partial=true;product=16S ribosomal RNA NZ_JAVXZI010000051.1 cmsearch exon 490 580 . - . ID=exon-VMS06_RS22745-1;Parent=rna-VMS06_RS22745;Dbxref=RFAM:RF00177;end_range=580,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22745;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JAVXZI010000052.1 1 524 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000052.1 RefSeq region 1 524 . + . ID=NZ_JAVXZI010000052.1:1..524;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000052.1 RefSeq pseudogene 1 468 . + . ID=gene-VMS06_RS22750;Name=VMS06_RS22750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22750;partial=true;pseudo=true;start_range=.,1 NZ_JAVXZI010000052.1 Protein Homology CDS 1 468 . + 0 ID=cds-VMS06_RS22750;Parent=gene-VMS06_RS22750;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=VMS06_RS22750;partial=true;product=IS5-like element IS903 family transposase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVXZI010000053.1 1 370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000053.1 RefSeq region 1 370 . + . ID=NZ_JAVXZI010000053.1:1..370;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000053.1 RefSeq gene 238 313 . - . ID=gene-VMS06_RS22755;Name=VMS06_RS22755;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS22755 NZ_JAVXZI010000053.1 tRNAscan-SE tRNA 238 313 . - . ID=rna-VMS06_RS22755;Parent=gene-VMS06_RS22755;anticodon=(pos:complement(277..279));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS22755;product=tRNA-Glu NZ_JAVXZI010000053.1 tRNAscan-SE exon 238 313 . - . ID=exon-VMS06_RS22755-1;Parent=rna-VMS06_RS22755;anticodon=(pos:complement(277..279));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS22755;product=tRNA-Glu ##sequence-region NZ_JAVXZI010000054.1 1 350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000054.1 RefSeq region 1 350 . + . ID=NZ_JAVXZI010000054.1:1..350;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000054.1 RefSeq gene 1 114 . - . ID=gene-VMS06_RS22760;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VMS06_RS22760;partial=true;start_range=.,1 NZ_JAVXZI010000054.1 cmsearch rRNA 1 114 . - . ID=rna-VMS06_RS22760;Parent=gene-VMS06_RS22760;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22760;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000054.1 cmsearch exon 1 114 . - . ID=exon-VMS06_RS22760-1;Parent=rna-VMS06_RS22760;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22760;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000054.1 RefSeq gene 158 233 . - . ID=gene-VMS06_RS22765;Name=VMS06_RS22765;gbkey=Gene;gene_biotype=tRNA;locus_tag=VMS06_RS22765 NZ_JAVXZI010000054.1 tRNAscan-SE tRNA 158 233 . - . ID=rna-VMS06_RS22765;Parent=gene-VMS06_RS22765;anticodon=(pos:complement(198..200));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS22765;product=tRNA-Thr NZ_JAVXZI010000054.1 tRNAscan-SE exon 158 233 . - . ID=exon-VMS06_RS22765-1;Parent=rna-VMS06_RS22765;anticodon=(pos:complement(198..200));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=VMS06_RS22765;product=tRNA-Thr NZ_JAVXZI010000054.1 RefSeq gene 248 350 . - . ID=gene-VMS06_RS22770;Name=rrf;end_range=350,.;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=VMS06_RS22770;partial=true NZ_JAVXZI010000054.1 cmsearch rRNA 248 350 . - . ID=rna-VMS06_RS22770;Parent=gene-VMS06_RS22770;Dbxref=RFAM:RF00001;end_range=350,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22770;partial=true;product=5S ribosomal RNA NZ_JAVXZI010000054.1 cmsearch exon 248 350 . - . ID=exon-VMS06_RS22770-1;Parent=rna-VMS06_RS22770;Dbxref=RFAM:RF00001;end_range=350,.;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22770;partial=true;product=5S ribosomal RNA ##sequence-region NZ_JAVXZI010000055.1 1 267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000055.1 RefSeq region 1 267 . + . ID=NZ_JAVXZI010000055.1:1..267;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000055.1 RefSeq gene 201 267 . + . ID=gene-VMS06_RS22775;Name=VMS06_RS22775;end_range=267,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22775;partial=true NZ_JAVXZI010000055.1 cmsearch rRNA 201 267 . + . ID=rna-VMS06_RS22775;Parent=gene-VMS06_RS22775;Dbxref=RFAM:RF00177;end_range=267,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22775;partial=true;product=16S ribosomal RNA NZ_JAVXZI010000055.1 cmsearch exon 201 267 . + . ID=exon-VMS06_RS22775-1;Parent=rna-VMS06_RS22775;Dbxref=RFAM:RF00177;end_range=267,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22775;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JAVXZI010000056.1 1 257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000056.1 RefSeq region 1 257 . + . ID=NZ_JAVXZI010000056.1:1..257;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000056.1 RefSeq gene 1 64 . + . ID=gene-VMS06_RS22780;Name=VMS06_RS22780;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22780;partial=true;start_range=.,1 NZ_JAVXZI010000056.1 cmsearch rRNA 1 64 . + . ID=rna-VMS06_RS22780;Parent=gene-VMS06_RS22780;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22780;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000056.1 cmsearch exon 1 64 . + . ID=exon-VMS06_RS22780-1;Parent=rna-VMS06_RS22780;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22780;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAVXZI010000057.1 1 244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000057.1 RefSeq region 1 244 . + . ID=NZ_JAVXZI010000057.1:1..244;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000057.1 RefSeq gene 1 244 . - . ID=gene-VMS06_RS22785;Name=VMS06_RS22785;end_range=244,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22785;partial=true;start_range=.,1 NZ_JAVXZI010000057.1 cmsearch rRNA 1 244 . - . ID=rna-VMS06_RS22785;Parent=gene-VMS06_RS22785;Dbxref=RFAM:RF02541;end_range=244,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22785;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000057.1 cmsearch exon 1 244 . - . ID=exon-VMS06_RS22785-1;Parent=rna-VMS06_RS22785;Dbxref=RFAM:RF02541;end_range=244,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22785;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAVXZI010000058.1 1 243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000058.1 RefSeq region 1 243 . + . ID=NZ_JAVXZI010000058.1:1..243;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000058.1 RefSeq gene 1 243 . + . ID=gene-VMS06_RS22970;Name=VMS06_RS22970;end_range=243,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22970;partial=true;start_range=.,1 NZ_JAVXZI010000058.1 cmsearch rRNA 1 243 . + . ID=rna-VMS06_RS22970;Parent=gene-VMS06_RS22970;Dbxref=RFAM:RF02541;end_range=243,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22970;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000058.1 cmsearch exon 1 243 . + . ID=exon-VMS06_RS22970-1;Parent=rna-VMS06_RS22970;Dbxref=RFAM:RF02541;end_range=243,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22970;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAVXZI010000059.1 1 226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000059.1 RefSeq region 1 226 . + . ID=NZ_JAVXZI010000059.1:1..226;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000059.1 RefSeq pseudogene 1 226 . + . ID=gene-VMS06_RS22795;Name=VMS06_RS22795;end_range=226,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=VMS06_RS22795;partial=true;pseudo=true;start_range=.,1 NZ_JAVXZI010000059.1 Protein Homology CDS 1 226 . + 2 ID=cds-VMS06_RS22795;Parent=gene-VMS06_RS22795;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=226,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014170525.1;locus_tag=VMS06_RS22795;partial=true;product=RHS repeat domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAVXZI010000060.1 1 224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000060.1 RefSeq region 1 224 . + . ID=NZ_JAVXZI010000060.1:1..224;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000060.1 RefSeq gene 1 224 . + . ID=gene-VMS06_RS22800;Name=VMS06_RS22800;end_range=224,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22800;partial=true;start_range=.,1 NZ_JAVXZI010000060.1 cmsearch rRNA 1 224 . + . ID=rna-VMS06_RS22800;Parent=gene-VMS06_RS22800;Dbxref=RFAM:RF02541;end_range=224,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22800;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000060.1 cmsearch exon 1 224 . + . ID=exon-VMS06_RS22800-1;Parent=rna-VMS06_RS22800;Dbxref=RFAM:RF02541;end_range=224,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22800;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAVXZI010000061.1 1 218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000061.1 RefSeq region 1 218 . + . ID=NZ_JAVXZI010000061.1:1..218;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000061.1 RefSeq gene 133 218 . - . ID=gene-VMS06_RS22805;Name=VMS06_RS22805;end_range=218,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22805;partial=true NZ_JAVXZI010000061.1 cmsearch rRNA 133 218 . - . ID=rna-VMS06_RS22805;Parent=gene-VMS06_RS22805;Dbxref=RFAM:RF00177;end_range=218,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22805;partial=true;product=16S ribosomal RNA NZ_JAVXZI010000061.1 cmsearch exon 133 218 . - . ID=exon-VMS06_RS22805-1;Parent=rna-VMS06_RS22805;Dbxref=RFAM:RF00177;end_range=218,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22805;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JAVXZI010000062.1 1 206 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000062.1 RefSeq region 1 206 . + . ID=NZ_JAVXZI010000062.1:1..206;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000062.1 RefSeq gene 3 206 . + . ID=gene-VMS06_RS22975;Name=VMS06_RS22975;end_range=206,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22975;partial=true NZ_JAVXZI010000062.1 cmsearch rRNA 3 206 . + . ID=rna-VMS06_RS22975;Parent=gene-VMS06_RS22975;Dbxref=RFAM:RF00177;end_range=206,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22975;partial=true;product=16S ribosomal RNA NZ_JAVXZI010000062.1 cmsearch exon 3 206 . + . ID=exon-VMS06_RS22975-1;Parent=rna-VMS06_RS22975;Dbxref=RFAM:RF00177;end_range=206,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22975;partial=true;product=16S ribosomal RNA ##sequence-region NZ_JAVXZI010000063.1 1 202 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000063.1 RefSeq region 1 202 . + . ID=NZ_JAVXZI010000063.1:1..202;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000063.1 RefSeq gene 1 64 . + . ID=gene-VMS06_RS22815;Name=VMS06_RS22815;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22815;partial=true;start_range=.,1 NZ_JAVXZI010000063.1 cmsearch rRNA 1 64 . + . ID=rna-VMS06_RS22815;Parent=gene-VMS06_RS22815;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22815;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JAVXZI010000063.1 cmsearch exon 1 64 . + . ID=exon-VMS06_RS22815-1;Parent=rna-VMS06_RS22815;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22815;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAVXZI010000064.1 1 200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=158836 NZ_JAVXZI010000064.1 RefSeq region 1 200 . + . ID=NZ_JAVXZI010000064.1:1..200;Dbxref=taxon:158836;collection-date=2023;country=Tunisia;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=Columba livia;strain=62765_sr NZ_JAVXZI010000064.1 RefSeq gene 139 200 . - . ID=gene-VMS06_RS22820;Name=VMS06_RS22820;end_range=200,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=VMS06_RS22820;partial=true NZ_JAVXZI010000064.1 cmsearch rRNA 139 200 . - . ID=rna-VMS06_RS22820;Parent=gene-VMS06_RS22820;Dbxref=RFAM:RF00177;end_range=200,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22820;partial=true;product=16S ribosomal RNA NZ_JAVXZI010000064.1 cmsearch exon 139 200 . - . ID=exon-VMS06_RS22820-1;Parent=rna-VMS06_RS22820;Dbxref=RFAM:RF00177;end_range=200,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=VMS06_RS22820;partial=true;product=16S ribosomal RNA ###